Query psy6542
Match_columns 334
No_of_seqs 156 out of 2376
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 20:41:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6542.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6542hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0598|consensus 100.0 3.3E-41 7.2E-46 303.8 16.0 231 12-270 35-272 (357)
2 KOG0615|consensus 100.0 4.7E-39 1E-43 292.5 13.9 228 13-270 183-432 (475)
3 KOG0581|consensus 100.0 3.8E-38 8.3E-43 284.1 18.0 184 12-225 89-280 (364)
4 KOG0616|consensus 100.0 2.5E-38 5.3E-43 277.2 14.7 228 12-270 54-287 (355)
5 KOG0694|consensus 100.0 7.9E-38 1.7E-42 300.2 15.0 228 12-270 378-614 (694)
6 KOG0595|consensus 100.0 3.1E-37 6.7E-42 280.7 16.4 187 11-226 19-218 (429)
7 KOG0591|consensus 100.0 1.7E-38 3.6E-43 276.5 5.4 237 12-268 29-274 (375)
8 KOG0575|consensus 100.0 2.2E-36 4.8E-41 287.1 16.6 229 12-270 28-264 (592)
9 KOG0593|consensus 100.0 3.9E-37 8.4E-42 270.4 6.7 189 12-228 12-208 (396)
10 KOG0600|consensus 100.0 9E-36 2E-40 277.1 13.1 188 15-229 130-327 (560)
11 KOG0659|consensus 100.0 5.3E-35 1.2E-39 252.8 13.3 259 13-306 13-281 (318)
12 KOG0583|consensus 100.0 1.8E-34 3.9E-39 271.8 18.2 227 12-270 27-270 (370)
13 KOG0597|consensus 100.0 1.8E-35 3.8E-40 277.9 10.2 229 12-270 12-246 (808)
14 KOG0690|consensus 100.0 2.6E-35 5.7E-40 261.1 10.5 229 12-270 178-414 (516)
15 KOG0592|consensus 100.0 7.1E-35 1.5E-39 273.1 13.9 226 14-270 85-333 (604)
16 KOG0588|consensus 100.0 4.2E-34 9E-39 273.1 15.3 226 12-269 22-257 (786)
17 KOG0610|consensus 100.0 2.2E-33 4.8E-38 255.8 17.9 231 12-270 87-383 (459)
18 KOG0611|consensus 100.0 3.5E-34 7.7E-39 260.1 12.0 224 13-268 64-296 (668)
19 KOG0663|consensus 100.0 9.1E-34 2E-38 252.1 14.3 191 11-228 85-284 (419)
20 KOG0605|consensus 100.0 1.2E-33 2.6E-38 264.9 15.1 228 11-268 150-435 (550)
21 KOG0578|consensus 100.0 1E-33 2.2E-38 267.0 12.5 181 12-224 283-471 (550)
22 KOG0585|consensus 100.0 4.5E-33 9.8E-38 257.3 13.1 231 12-270 107-367 (576)
23 KOG0661|consensus 100.0 1.2E-33 2.5E-38 261.4 8.9 262 12-306 20-291 (538)
24 KOG0660|consensus 100.0 3.4E-33 7.4E-38 251.2 10.7 195 12-234 32-240 (359)
25 KOG0033|consensus 100.0 1.2E-33 2.7E-38 241.9 7.3 223 17-270 26-262 (355)
26 KOG0582|consensus 100.0 6.8E-32 1.5E-36 248.0 17.9 184 14-225 38-235 (516)
27 KOG0197|consensus 100.0 3.5E-32 7.7E-37 255.5 16.4 229 12-304 216-454 (468)
28 KOG0580|consensus 100.0 2.3E-33 4.9E-38 239.5 7.4 230 12-270 32-268 (281)
29 KOG0594|consensus 100.0 2.8E-31 6.1E-36 239.0 21.0 192 12-227 21-226 (323)
30 KOG0192|consensus 100.0 1.4E-31 3.1E-36 250.4 18.9 188 12-226 51-250 (362)
31 KOG0032|consensus 100.0 1.7E-31 3.7E-36 251.8 18.7 228 12-270 45-288 (382)
32 KOG0198|consensus 100.0 8.6E-32 1.9E-36 245.4 15.0 183 11-224 26-224 (313)
33 KOG0589|consensus 100.0 1.4E-31 2.9E-36 250.6 13.5 229 12-270 14-253 (426)
34 KOG0201|consensus 100.0 6.4E-32 1.4E-36 247.8 10.2 228 11-270 22-258 (467)
35 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-30 2.8E-35 242.7 17.7 227 12-269 5-240 (323)
36 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-30 3.4E-35 242.7 18.4 228 12-270 5-241 (328)
37 PTZ00263 protein kinase A cata 100.0 2.2E-30 4.8E-35 241.8 17.5 226 12-269 28-260 (329)
38 cd05585 STKc_YPK1_like Catalyt 100.0 3E-30 6.6E-35 239.0 17.7 227 12-269 3-238 (312)
39 KOG0586|consensus 100.0 2.1E-30 4.4E-35 246.7 16.4 228 12-270 66-301 (596)
40 cd05628 STKc_NDR1 Catalytic do 100.0 2.3E-30 4.9E-35 244.9 16.5 187 12-227 11-241 (363)
41 cd05595 STKc_PKB_beta Catalyti 100.0 3.3E-30 7.2E-35 240.0 17.4 227 12-269 5-240 (323)
42 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-29 3.3E-34 231.2 20.3 188 12-227 10-206 (285)
43 cd05594 STKc_PKB_alpha Catalyt 100.0 5.2E-30 1.1E-34 238.7 17.0 227 12-269 5-241 (325)
44 KOG4717|consensus 100.0 2.2E-30 4.8E-35 241.4 14.2 228 13-270 29-265 (864)
45 cd05612 STKc_PRKX_like Catalyt 100.0 2.8E-30 6.1E-35 236.8 14.6 227 11-269 10-243 (291)
46 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-30 5.3E-35 241.5 14.5 186 12-226 10-212 (338)
47 cd05625 STKc_LATS1 Catalytic d 100.0 9.8E-30 2.1E-34 242.1 18.0 186 12-226 11-252 (382)
48 cd05599 STKc_NDR_like Catalyti 100.0 8.6E-30 1.9E-34 240.7 17.1 187 12-226 11-243 (364)
49 cd05621 STKc_ROCK2 Catalytic d 100.0 9.6E-30 2.1E-34 241.3 17.5 187 12-228 53-253 (370)
50 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.4E-30 9.6E-35 235.1 14.6 187 12-226 15-208 (288)
51 KOG1989|consensus 100.0 1E-29 2.2E-34 250.8 18.1 189 11-226 46-262 (738)
52 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-29 3.3E-34 235.3 17.9 228 12-270 5-242 (321)
53 cd05590 STKc_nPKC_eta Catalyti 100.0 1E-29 2.2E-34 236.4 16.7 228 12-270 5-242 (320)
54 cd07848 STKc_CDKL5 Catalytic d 100.0 3.9E-30 8.4E-35 234.7 13.4 186 12-226 11-205 (287)
55 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-29 2.9E-34 240.8 17.3 187 12-227 11-253 (377)
56 cd05627 STKc_NDR2 Catalytic do 100.0 9.4E-30 2E-34 240.4 15.7 189 11-228 10-242 (360)
57 KOG0696|consensus 100.0 8E-31 1.7E-35 238.8 7.8 230 12-270 359-596 (683)
58 PTZ00426 cAMP-dependent protei 100.0 1.6E-29 3.5E-34 237.1 16.9 227 12-270 40-274 (340)
59 cd05598 STKc_LATS Catalytic do 100.0 1.2E-29 2.5E-34 241.0 16.1 186 12-226 11-248 (376)
60 KOG4236|consensus 100.0 9.4E-30 2E-34 237.7 15.0 184 14-225 576-769 (888)
61 KOG0658|consensus 100.0 4.7E-30 1E-34 231.3 12.4 184 11-227 33-231 (364)
62 cd05575 STKc_SGK Catalytic dom 100.0 2.1E-29 4.6E-34 234.5 17.0 228 12-270 5-242 (323)
63 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-29 5.8E-34 238.3 18.0 187 12-228 53-253 (370)
64 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-29 8.5E-34 227.9 18.3 190 12-226 3-201 (280)
65 cd05622 STKc_ROCK1 Catalytic d 100.0 3.3E-29 7.1E-34 237.8 18.4 187 12-228 53-253 (371)
66 cd05604 STKc_SGK3 Catalytic do 100.0 2.2E-29 4.8E-34 234.5 16.6 228 12-270 5-242 (325)
67 PTZ00267 NIMA-related protein 100.0 3.6E-29 7.7E-34 245.1 18.7 232 11-270 76-318 (478)
68 cd05603 STKc_SGK2 Catalytic do 100.0 3.3E-29 7.2E-34 232.8 17.6 228 12-270 5-242 (321)
69 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-29 5.3E-34 233.5 16.6 228 12-270 5-242 (316)
70 KOG1026|consensus 100.0 3.6E-30 7.7E-35 253.2 11.4 243 12-310 496-765 (774)
71 cd05588 STKc_aPKC Catalytic do 100.0 6E-29 1.3E-33 232.1 19.0 228 12-270 5-251 (329)
72 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-29 3.8E-34 235.6 15.0 229 12-270 3-244 (330)
73 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-29 3.9E-34 230.6 14.8 189 12-227 11-214 (290)
74 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.4E-29 7.4E-34 233.9 16.9 185 12-226 11-202 (333)
75 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-28 3.6E-33 229.2 21.0 228 12-270 5-251 (329)
76 cd05602 STKc_SGK1 Catalytic do 100.0 6.2E-29 1.4E-33 231.5 18.1 229 12-270 5-242 (325)
77 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.8E-29 8.2E-34 230.4 16.5 185 12-226 15-208 (303)
78 KOG0612|consensus 100.0 1.3E-30 2.8E-35 261.2 7.0 228 12-268 85-328 (1317)
79 cd05626 STKc_LATS2 Catalytic d 100.0 5.3E-29 1.2E-33 237.1 17.6 186 12-226 11-252 (381)
80 cd05587 STKc_cPKC Catalytic do 100.0 5.1E-29 1.1E-33 232.0 17.0 228 12-270 10-247 (324)
81 cd05607 STKc_GRK7 Catalytic do 100.0 1.7E-28 3.6E-33 223.4 19.9 187 12-225 3-197 (277)
82 cd05620 STKc_nPKC_delta Cataly 100.0 3.9E-29 8.5E-34 232.1 16.0 228 12-270 5-242 (316)
83 cd05616 STKc_cPKC_beta Catalyt 100.0 6.4E-29 1.4E-33 231.2 17.2 229 11-270 9-247 (323)
84 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-28 3.6E-33 228.9 19.9 229 12-270 5-249 (327)
85 cd05619 STKc_nPKC_theta Cataly 100.0 5.3E-29 1.2E-33 231.2 16.5 228 12-270 5-242 (316)
86 cd05584 STKc_p70S6K Catalytic 100.0 8.4E-29 1.8E-33 230.5 17.6 227 12-269 6-245 (323)
87 cd05582 STKc_RSK_N N-terminal 100.0 3.7E-29 8E-34 232.2 15.0 228 12-270 6-244 (318)
88 cd07876 STKc_JNK2 Catalytic do 100.0 8E-29 1.7E-33 233.9 17.3 184 12-226 31-226 (359)
89 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.7E-29 1E-33 234.1 15.7 187 12-226 11-234 (350)
90 cd06649 PKc_MEK2 Catalytic dom 100.0 5.1E-28 1.1E-32 226.0 21.7 185 11-225 14-205 (331)
91 KOG0577|consensus 100.0 6.5E-30 1.4E-34 241.4 8.8 229 12-270 36-273 (948)
92 cd05589 STKc_PKN Catalytic dom 100.0 9.6E-29 2.1E-33 230.1 16.6 227 12-270 9-247 (324)
93 cd05615 STKc_cPKC_alpha Cataly 100.0 9.5E-29 2.1E-33 230.2 16.5 228 12-270 10-247 (323)
94 cd05601 STKc_CRIK Catalytic do 100.0 7.9E-29 1.7E-33 231.1 15.9 188 12-227 11-214 (330)
95 KOG0662|consensus 100.0 3.9E-29 8.4E-34 205.5 11.8 187 13-226 13-207 (292)
96 PLN00034 mitogen-activated pro 100.0 2.3E-28 4.9E-33 230.3 18.7 179 11-223 83-274 (353)
97 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-28 4.3E-33 229.1 18.1 244 11-311 16-335 (338)
98 KOG0599|consensus 100.0 1.2E-29 2.7E-34 220.4 9.0 228 12-270 27-278 (411)
99 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-28 2.6E-33 228.9 16.3 227 12-269 5-241 (318)
100 PHA03212 serine/threonine kina 100.0 1.4E-28 3E-33 235.0 16.3 175 12-222 102-284 (391)
101 KOG0604|consensus 100.0 2.9E-29 6.3E-34 220.5 10.6 223 13-270 73-317 (400)
102 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-28 2.3E-33 234.1 15.1 187 12-226 10-209 (372)
103 cd07874 STKc_JNK3 Catalytic do 100.0 1E-28 2.2E-33 232.8 14.7 185 11-226 26-222 (355)
104 KOG0584|consensus 100.0 1.2E-29 2.6E-34 241.9 8.4 182 12-219 50-241 (632)
105 cd05605 STKc_GRK4_like Catalyt 100.0 5.1E-28 1.1E-32 221.1 18.9 188 12-226 10-205 (285)
106 KOG0986|consensus 100.0 2.4E-29 5.1E-34 231.6 9.5 232 11-270 194-436 (591)
107 cd05597 STKc_DMPK_like Catalyt 100.0 3.7E-28 8.1E-33 227.0 17.8 187 12-226 11-212 (331)
108 PTZ00283 serine/threonine prot 100.0 2.9E-28 6.4E-33 239.3 17.3 233 12-270 42-292 (496)
109 cd05614 STKc_MSK2_N N-terminal 100.0 5.9E-28 1.3E-32 225.4 18.4 228 12-270 10-257 (332)
110 PHA02988 hypothetical protein; 100.0 3.4E-28 7.3E-33 222.4 16.1 235 11-309 29-278 (283)
111 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.7E-28 5.8E-33 225.4 15.6 186 12-226 16-209 (309)
112 cd07875 STKc_JNK1 Catalytic do 100.0 4.9E-28 1.1E-32 228.9 17.5 185 12-227 34-230 (364)
113 KOG0608|consensus 100.0 2.2E-28 4.7E-33 232.7 14.1 229 14-270 641-920 (1034)
114 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-27 6E-32 221.3 21.3 184 12-225 15-205 (333)
115 cd07863 STKc_CDK4 Catalytic do 100.0 2.7E-28 5.9E-33 222.5 14.2 188 12-226 10-211 (288)
116 cd05624 STKc_MRCK_beta Catalyt 100.0 8.1E-28 1.8E-32 224.7 17.5 188 12-227 11-213 (331)
117 PTZ00036 glycogen synthase kin 100.0 9.7E-28 2.1E-32 232.6 18.7 185 12-227 76-276 (440)
118 KOG0695|consensus 100.0 1.3E-28 2.7E-33 219.5 10.7 230 12-271 260-506 (593)
119 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.8E-28 1.2E-32 222.2 15.0 186 12-226 16-209 (301)
120 cd07861 STKc_CDK1_euk Catalyti 100.0 6.9E-28 1.5E-32 219.4 15.0 189 11-226 9-206 (285)
121 KOG1187|consensus 100.0 1.1E-27 2.4E-32 225.3 16.4 181 12-219 85-276 (361)
122 cd05096 PTKc_DDR1 Catalytic do 100.0 2.7E-27 5.9E-32 218.0 18.7 188 12-224 15-244 (304)
123 cd07839 STKc_CDK5 Catalytic do 100.0 3.6E-28 7.8E-33 221.3 12.6 187 12-225 10-204 (284)
124 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-27 3.2E-32 222.3 16.7 186 13-226 11-214 (327)
125 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4E-28 8.8E-33 227.5 12.9 184 12-226 25-220 (343)
126 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.7E-27 1E-31 213.6 19.4 186 12-223 11-208 (283)
127 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-27 5.6E-32 225.1 17.9 242 11-309 44-373 (375)
128 cd05106 PTKc_CSF-1R Catalytic 100.0 2.6E-27 5.6E-32 225.0 17.9 188 12-224 48-317 (374)
129 cd05632 STKc_GRK5 Catalytic do 100.0 5.5E-27 1.2E-31 214.3 19.4 188 12-226 10-205 (285)
130 cd05048 PTKc_Ror Catalytic Dom 100.0 2.1E-27 4.6E-32 216.1 16.4 240 12-309 15-282 (283)
131 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-27 6.9E-32 220.7 17.8 188 12-227 11-213 (332)
132 cd05630 STKc_GRK6 Catalytic do 100.0 9.4E-27 2E-31 212.8 20.4 187 12-226 10-205 (285)
133 PTZ00266 NIMA-related protein 100.0 3E-27 6.4E-32 242.2 18.8 196 12-225 23-246 (1021)
134 cd06619 PKc_MKK5 Catalytic dom 100.0 8.8E-27 1.9E-31 212.1 19.8 179 12-224 11-195 (279)
135 PRK13184 pknD serine/threonine 100.0 4.8E-27 1E-31 239.6 19.7 190 11-225 11-234 (932)
136 cd08529 STKc_FA2-like Catalyti 99.9 7.1E-27 1.5E-31 209.0 18.2 188 12-226 10-205 (256)
137 KOG0193|consensus 99.9 4.3E-27 9.3E-32 223.4 17.2 184 11-225 401-596 (678)
138 KOG0614|consensus 99.9 4.7E-29 1E-33 232.2 3.5 246 13-293 431-683 (732)
139 cd07868 STKc_CDK8 Catalytic do 99.9 8.1E-27 1.8E-31 216.0 18.4 187 12-226 11-220 (317)
140 KOG0196|consensus 99.9 5.3E-28 1.2E-32 234.7 10.6 261 13-332 640-918 (996)
141 cd05064 PTKc_EphR_A10 Catalyti 99.9 7.4E-27 1.6E-31 211.1 17.3 187 11-225 14-212 (266)
142 cd08228 STKc_Nek6 Catalytic do 99.9 1E-26 2.2E-31 209.7 18.0 188 12-224 12-208 (267)
143 PHA03211 serine/threonine kina 99.9 1.4E-26 3.1E-31 224.8 20.1 176 12-222 179-363 (461)
144 KOG0667|consensus 99.9 3E-27 6.5E-32 227.0 15.0 190 12-227 196-393 (586)
145 cd05042 PTKc_Aatyk Catalytic d 99.9 8.4E-27 1.8E-31 210.7 17.0 188 12-224 5-212 (269)
146 KOG0574|consensus 99.9 1.4E-28 3.1E-33 216.4 5.2 227 12-269 43-277 (502)
147 PHA03209 serine/threonine kina 99.9 6.2E-27 1.3E-31 221.0 16.7 178 12-224 76-259 (357)
148 cd05084 PTKc_Fes Catalytic dom 99.9 1.1E-26 2.3E-31 207.9 17.3 184 12-223 5-198 (252)
149 cd08219 STKc_Nek3 Catalytic do 99.9 1.5E-26 3.3E-31 207.2 18.2 184 12-224 10-202 (255)
150 cd05075 PTKc_Axl Catalytic dom 99.9 9.7E-27 2.1E-31 210.4 16.9 241 12-309 9-270 (272)
151 cd05108 PTKc_EGFR Catalytic do 99.9 1.8E-26 3.9E-31 214.0 18.4 183 12-224 17-214 (316)
152 KOG4721|consensus 99.9 1.3E-27 2.7E-32 225.2 10.6 170 13-221 135-311 (904)
153 cd00192 PTKc Catalytic domain 99.9 1.8E-26 3.9E-31 206.4 17.6 238 12-307 5-261 (262)
154 cd06615 PKc_MEK Catalytic doma 99.9 3.8E-26 8.3E-31 211.1 20.2 185 12-226 11-202 (308)
155 cd07832 STKc_CCRK Catalytic do 99.9 7.2E-27 1.6E-31 212.6 14.9 187 12-226 10-205 (286)
156 cd05633 STKc_GRK3 Catalytic do 99.9 3.1E-26 6.8E-31 208.7 18.8 229 12-270 4-245 (279)
157 cd07843 STKc_CDC2L1 Catalytic 99.9 1.1E-26 2.3E-31 212.8 15.7 188 11-226 14-211 (293)
158 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 3.2E-26 6.9E-31 208.8 18.9 187 12-225 11-210 (286)
159 cd05580 STKc_PKA Catalytic dom 99.9 2.4E-26 5.3E-31 210.3 18.0 227 12-270 11-244 (290)
160 cd05606 STKc_beta_ARK Catalyti 99.9 5E-26 1.1E-30 207.2 19.9 229 12-270 4-245 (278)
161 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.6E-26 7.8E-31 206.7 18.5 188 12-224 5-212 (269)
162 cd06607 STKc_TAO Catalytic dom 99.9 4.4E-26 9.5E-31 210.4 19.5 184 12-225 25-217 (307)
163 cd07847 STKc_CDKL1_4 Catalytic 99.9 8E-27 1.7E-31 212.3 14.3 186 12-226 11-205 (286)
164 PHA03207 serine/threonine kina 99.9 1.5E-26 3.3E-31 221.0 16.9 181 11-227 101-292 (392)
165 KOG0579|consensus 99.9 6.9E-28 1.5E-32 229.2 7.2 228 13-270 43-284 (1187)
166 cd05116 PTKc_Syk Catalytic dom 99.9 3.1E-26 6.7E-31 205.8 17.5 185 12-225 5-202 (257)
167 cd06625 STKc_MEKK3_like Cataly 99.9 4.5E-26 9.7E-31 204.9 18.6 184 12-224 12-209 (263)
168 KOG4250|consensus 99.9 3.4E-27 7.3E-32 227.8 11.6 193 8-227 19-229 (732)
169 KOG0666|consensus 99.9 1.8E-27 3.9E-32 210.3 8.8 191 12-226 34-244 (438)
170 cd05052 PTKc_Abl Catalytic dom 99.9 3.8E-26 8.2E-31 205.9 17.8 235 12-309 16-261 (263)
171 cd08223 STKc_Nek4 Catalytic do 99.9 4.7E-26 1E-30 204.0 18.2 184 12-223 10-203 (257)
172 PLN00009 cyclin-dependent kina 99.9 1.5E-26 3.2E-31 211.9 15.1 188 11-226 11-208 (294)
173 cd07860 STKc_CDK2_3 Catalytic 99.9 8.6E-27 1.9E-31 212.2 13.3 188 11-226 9-205 (284)
174 cd05090 PTKc_Ror1 Catalytic do 99.9 4.2E-26 9.2E-31 207.8 17.8 189 12-225 15-230 (283)
175 cd05035 PTKc_Axl_like Catalyti 99.9 7E-26 1.5E-30 204.6 18.9 242 11-309 8-271 (273)
176 cd07865 STKc_CDK9 Catalytic do 99.9 2.1E-26 4.5E-31 211.9 15.7 187 12-226 22-228 (310)
177 cd05061 PTKc_InsR Catalytic do 99.9 3.6E-26 7.9E-31 209.0 16.9 248 12-317 16-285 (288)
178 cd07845 STKc_CDK10 Catalytic d 99.9 1.6E-26 3.5E-31 213.4 14.7 188 11-226 16-213 (309)
179 cd05049 PTKc_Trk Catalytic dom 99.9 5.6E-26 1.2E-30 206.2 18.0 189 12-225 15-228 (280)
180 cd05093 PTKc_TrkB Catalytic do 99.9 5.9E-26 1.3E-30 207.6 18.1 189 12-226 15-227 (288)
181 cd05088 PTKc_Tie2 Catalytic do 99.9 3.7E-26 8.1E-31 210.7 16.8 246 11-314 16-284 (303)
182 cd05053 PTKc_FGFR Catalytic do 99.9 6E-26 1.3E-30 207.7 18.0 242 11-310 21-291 (293)
183 PHA03210 serine/threonine kina 99.9 1.7E-26 3.7E-31 227.3 15.4 190 12-225 158-372 (501)
184 cd08229 STKc_Nek7 Catalytic do 99.9 5.1E-26 1.1E-30 205.1 17.3 188 12-224 12-208 (267)
185 KOG0596|consensus 99.9 8.1E-27 1.8E-31 219.4 12.3 229 12-270 371-622 (677)
186 cd06645 STKc_MAP4K3 Catalytic 99.9 1E-25 2.2E-30 203.2 19.2 182 12-224 19-211 (267)
187 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.1E-25 2.4E-30 202.5 19.2 188 12-224 12-208 (267)
188 cd05086 PTKc_Aatyk2 Catalytic 99.9 8.7E-26 1.9E-30 204.3 18.6 188 12-224 5-211 (268)
189 cd08217 STKc_Nek2 Catalytic do 99.9 6.8E-26 1.5E-30 203.2 17.7 189 12-225 10-213 (265)
190 cd05577 STKc_GRK Catalytic dom 99.9 8.5E-26 1.8E-30 205.3 18.3 187 12-226 3-198 (277)
191 cd05063 PTKc_EphR_A2 Catalytic 99.9 5.3E-26 1.1E-30 205.3 16.8 186 11-224 14-213 (268)
192 cd07867 STKc_CDC2L6 Catalytic 99.9 7.5E-26 1.6E-30 209.3 18.1 186 12-226 11-220 (317)
193 cd06643 STKc_SLK Catalytic dom 99.9 1.5E-25 3.2E-30 204.1 19.7 185 12-226 15-212 (282)
194 cd08221 STKc_Nek9 Catalytic do 99.9 1.2E-25 2.6E-30 201.5 18.7 185 12-224 10-203 (256)
195 cd05033 PTKc_EphR Catalytic do 99.9 8.6E-26 1.9E-30 203.8 17.9 238 11-309 13-264 (266)
196 PF00069 Pkinase: Protein kina 99.9 1.5E-26 3.3E-31 207.2 12.9 184 12-224 9-201 (260)
197 cd05059 PTKc_Tec_like Catalyti 99.9 8.7E-26 1.9E-30 202.7 17.8 182 12-225 14-205 (256)
198 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.1E-25 2.4E-30 215.5 19.5 189 11-224 46-342 (400)
199 KOG2052|consensus 99.9 5.9E-27 1.3E-31 215.5 10.2 175 5-215 221-420 (513)
200 cd05065 PTKc_EphR_B Catalytic 99.9 9E-26 2E-30 204.0 17.8 187 10-224 12-214 (269)
201 KOG1151|consensus 99.9 4.1E-26 8.9E-31 209.8 15.6 184 12-222 473-684 (775)
202 cd06633 STKc_TAO3 Catalytic do 99.9 1.9E-25 4.1E-30 207.0 20.4 186 11-226 30-224 (313)
203 cd05578 STKc_Yank1 Catalytic d 99.9 4.6E-26 1E-30 204.5 15.7 187 11-226 9-203 (258)
204 cd05574 STKc_phototropin_like 99.9 1E-25 2.3E-30 208.5 18.4 187 12-226 11-236 (316)
205 cd05041 PTKc_Fes_like Catalyti 99.9 1.4E-25 3E-30 200.4 18.6 185 12-225 5-199 (251)
206 cd07850 STKc_JNK Catalytic dom 99.9 4.5E-26 9.7E-31 214.6 16.2 184 12-226 26-221 (353)
207 cd07835 STKc_CDK1_like Catalyt 99.9 2.4E-26 5.2E-31 209.2 13.8 189 11-226 8-204 (283)
208 cd06611 STKc_SLK_like Catalyti 99.9 1.1E-25 2.4E-30 204.6 18.1 184 12-225 15-211 (280)
209 cd06635 STKc_TAO1 Catalytic do 99.9 2E-25 4.4E-30 207.1 20.2 185 11-225 34-227 (317)
210 cd07837 STKc_CdkB_plant Cataly 99.9 3.8E-26 8.3E-31 209.0 15.1 190 12-226 11-216 (295)
211 cd07844 STKc_PCTAIRE_like Cata 99.9 1E-25 2.2E-30 206.0 17.9 186 11-225 14-207 (291)
212 cd07842 STKc_CDK8_like Catalyt 99.9 7.3E-26 1.6E-30 209.0 17.0 192 11-227 9-221 (316)
213 cd06640 STKc_MST4 Catalytic do 99.9 1.7E-25 3.8E-30 203.2 19.1 184 12-226 14-205 (277)
214 cd06646 STKc_MAP4K5 Catalytic 99.9 1.9E-25 4.1E-30 201.5 19.2 181 12-223 19-210 (267)
215 cd07841 STKc_CDK7 Catalytic do 99.9 2.6E-26 5.7E-31 210.6 13.8 188 11-226 9-207 (298)
216 cd05091 PTKc_Ror2 Catalytic do 99.9 7.6E-26 1.6E-30 206.0 16.7 239 12-308 15-281 (283)
217 cd05062 PTKc_IGF-1R Catalytic 99.9 9.9E-26 2.1E-30 204.7 17.4 190 11-225 15-225 (277)
218 cd05032 PTKc_InsR_like Catalyt 99.9 1.2E-25 2.7E-30 203.7 17.9 189 12-225 16-225 (277)
219 cd07836 STKc_Pho85 Catalytic d 99.9 3.7E-26 8.1E-31 207.8 14.5 188 12-226 10-205 (284)
220 cd06644 STKc_STK10_LOK Catalyt 99.9 2.8E-25 6.1E-30 203.4 20.3 184 12-225 22-218 (292)
221 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.5E-25 3.3E-30 204.3 18.4 185 12-226 15-206 (284)
222 cd05115 PTKc_Zap-70 Catalytic 99.9 1.7E-25 3.6E-30 201.4 18.3 185 12-225 5-202 (257)
223 cd07855 STKc_ERK5 Catalytic do 99.9 1.9E-26 4.1E-31 215.5 12.4 187 12-226 15-216 (334)
224 KOG4645|consensus 99.9 1.5E-27 3.3E-32 242.0 5.3 223 15-268 1248-1487(1509)
225 cd05572 STKc_cGK_PKG Catalytic 99.9 1.5E-25 3.4E-30 201.5 17.8 186 12-226 3-196 (262)
226 cd06628 STKc_MAPKKK_Byr2_like 99.9 1.6E-25 3.5E-30 201.9 17.7 184 12-224 10-214 (267)
227 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.8E-25 3.9E-30 200.5 18.0 184 12-226 14-206 (256)
228 cd07833 STKc_CDKL Catalytic do 99.9 2.6E-26 5.6E-31 209.1 12.5 186 12-226 11-206 (288)
229 cd05072 PTKc_Lyn Catalytic dom 99.9 1.8E-25 4E-30 200.9 17.9 182 12-224 16-207 (261)
230 cd06917 STKc_NAK1_like Catalyt 99.9 3.5E-25 7.5E-30 200.9 19.8 185 11-226 10-206 (277)
231 cd05066 PTKc_EphR_A Catalytic 99.9 1.5E-25 3.2E-30 202.4 17.2 185 12-224 14-212 (267)
232 KOG0607|consensus 99.9 2E-26 4.2E-31 204.4 11.0 221 17-269 93-355 (463)
233 cd06654 STKc_PAK1 Catalytic do 99.9 1.8E-25 4E-30 205.4 18.0 184 11-226 29-220 (296)
234 cd05094 PTKc_TrkC Catalytic do 99.9 1.8E-25 4E-30 204.6 17.8 189 12-226 15-230 (291)
235 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 5.5E-25 1.2E-29 200.7 20.8 251 12-309 14-282 (284)
236 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.4E-25 3.1E-30 201.5 16.6 234 12-308 16-259 (261)
237 cd05579 STKc_MAST_like Catalyt 99.9 7.8E-26 1.7E-30 202.8 14.8 186 12-226 3-205 (265)
238 cd06637 STKc_TNIK Catalytic do 99.9 2.5E-25 5.3E-30 201.2 18.1 182 11-223 15-217 (272)
239 KOG0194|consensus 99.9 3.3E-26 7.2E-31 218.0 13.0 187 12-226 167-367 (474)
240 KOG0669|consensus 99.9 7.7E-28 1.7E-32 207.2 1.5 188 15-229 30-236 (376)
241 KOG1035|consensus 99.9 3.1E-26 6.8E-31 231.5 13.3 178 12-217 489-814 (1351)
242 cd07858 STKc_TEY_MAPK_plant Ca 99.9 4.9E-26 1.1E-30 213.0 13.7 186 12-226 15-213 (337)
243 cd05060 PTKc_Syk_like Catalyti 99.9 2.1E-25 4.5E-30 200.2 17.2 235 12-310 5-255 (257)
244 cd06613 STKc_MAP4K3_like Catal 99.9 2.9E-25 6.4E-30 199.3 18.2 185 11-225 12-207 (262)
245 cd07870 STKc_PFTAIRE2 Catalyti 99.9 1.5E-25 3.3E-30 204.9 16.6 185 12-226 15-208 (291)
246 cd05050 PTKc_Musk Catalytic do 99.9 9.9E-26 2.2E-30 205.8 15.3 240 11-308 14-287 (288)
247 cd05068 PTKc_Frk_like Catalyti 99.9 2.6E-25 5.6E-30 200.1 17.6 184 12-225 16-208 (261)
248 cd05109 PTKc_HER2 Catalytic do 99.9 2.5E-25 5.3E-30 202.3 17.6 185 11-224 16-214 (279)
249 cd06638 STKc_myosinIIIA Cataly 99.9 4.2E-25 9E-30 201.3 19.0 185 12-224 28-231 (286)
250 cd05054 PTKc_VEGFR Catalytic d 99.9 3E-25 6.4E-30 208.0 18.4 188 12-224 17-278 (337)
251 cd05609 STKc_MAST Catalytic do 99.9 2.7E-25 5.8E-30 205.0 17.7 186 12-226 11-220 (305)
252 cd06655 STKc_PAK2 Catalytic do 99.9 3.2E-25 7E-30 203.8 18.1 184 11-226 28-219 (296)
253 cd05611 STKc_Rim15_like Cataly 99.9 2.6E-25 5.6E-30 199.9 17.1 184 12-226 6-197 (260)
254 cd05045 PTKc_RET Catalytic dom 99.9 2.3E-25 4.9E-30 203.8 17.0 244 11-312 9-288 (290)
255 cd06656 STKc_PAK3 Catalytic do 99.9 6.1E-25 1.3E-29 202.0 19.8 183 12-226 29-219 (297)
256 smart00219 TyrKc Tyrosine kina 99.9 5.3E-25 1.1E-29 196.8 18.8 187 11-224 8-207 (258)
257 cd06609 STKc_MST3_like Catalyt 99.9 4.5E-25 9.8E-30 199.9 18.5 183 12-225 11-201 (274)
258 cd08216 PK_STRAD Pseudokinase 99.9 9.5E-26 2.1E-30 208.5 14.4 188 11-226 9-214 (314)
259 PTZ00284 protein kinase; Provi 99.9 8.9E-26 1.9E-30 220.5 14.8 188 12-227 139-350 (467)
260 cd05040 PTKc_Ack_like Catalyti 99.9 2.7E-25 5.9E-30 199.2 16.8 185 11-224 4-203 (257)
261 cd05089 PTKc_Tie1 Catalytic do 99.9 2.6E-25 5.6E-30 204.3 17.0 190 11-225 11-222 (297)
262 cd05055 PTKc_PDGFR Catalytic d 99.9 4.1E-25 8.8E-30 203.7 18.3 187 12-225 45-247 (302)
263 cd06642 STKc_STK25-YSK1 Cataly 99.9 3.8E-25 8.1E-30 200.9 17.8 181 12-223 14-202 (277)
264 cd05051 PTKc_DDR Catalytic dom 99.9 5E-25 1.1E-29 201.8 18.7 186 12-222 15-234 (296)
265 cd05039 PTKc_Csk_like Catalyti 99.9 2.3E-25 4.9E-30 199.8 16.1 232 12-308 16-254 (256)
266 cd05113 PTKc_Btk_Bmx Catalytic 99.9 3.3E-25 7.3E-30 199.2 17.2 182 12-224 14-204 (256)
267 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.1E-25 6.8E-30 198.8 16.9 181 12-225 5-210 (259)
268 cd06605 PKc_MAPKK Catalytic do 99.9 1.9E-25 4.1E-30 201.0 15.5 186 11-225 10-202 (265)
269 cd05101 PTKc_FGFR2 Catalytic d 99.9 4.1E-25 8.8E-30 203.6 18.0 188 12-224 25-242 (304)
270 cd07846 STKc_CDKL2_3 Catalytic 99.9 4.1E-26 8.9E-31 207.8 11.2 187 11-226 10-205 (286)
271 cd05036 PTKc_ALK_LTK Catalytic 99.9 2.5E-25 5.4E-30 202.2 16.3 240 11-308 15-276 (277)
272 cd05099 PTKc_FGFR4 Catalytic d 99.9 4.4E-25 9.5E-30 204.5 18.1 242 12-311 22-294 (314)
273 cd07864 STKc_CDK12 Catalytic d 99.9 2.4E-25 5.2E-30 204.4 16.2 187 12-226 17-222 (302)
274 cd05085 PTKc_Fer Catalytic dom 99.9 6.8E-25 1.5E-29 195.9 18.7 184 12-224 5-197 (250)
275 cd08218 STKc_Nek1 Catalytic do 99.9 5.1E-25 1.1E-29 197.3 17.9 184 12-223 10-202 (256)
276 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 9.5E-25 2E-29 198.9 20.0 180 12-222 14-210 (283)
277 cd08220 STKc_Nek8 Catalytic do 99.9 8E-25 1.7E-29 195.7 19.0 184 12-223 10-202 (256)
278 cd05095 PTKc_DDR2 Catalytic do 99.9 3.9E-25 8.6E-30 202.9 17.4 247 11-308 14-295 (296)
279 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 7.8E-25 1.7E-29 200.1 19.2 189 11-225 10-206 (287)
280 cd06634 STKc_TAO2 Catalytic do 99.9 6.5E-25 1.4E-29 202.8 18.9 183 12-224 25-216 (308)
281 cd05107 PTKc_PDGFR_beta Cataly 99.9 4.7E-25 1E-29 211.1 18.4 187 12-223 47-343 (401)
282 cd05047 PTKc_Tie Catalytic dom 99.9 5.4E-25 1.2E-29 199.3 17.8 189 12-225 5-215 (270)
283 cd06658 STKc_PAK5 Catalytic do 99.9 1.6E-25 3.4E-30 205.5 14.3 181 12-224 32-220 (292)
284 cd08215 STKc_Nek Catalytic dom 99.9 8E-25 1.7E-29 195.3 18.4 187 12-223 10-204 (258)
285 cd05100 PTKc_FGFR3 Catalytic d 99.9 3.6E-25 7.9E-30 206.8 16.9 243 11-311 21-294 (334)
286 KOG4279|consensus 99.9 3.2E-26 7E-31 219.8 9.9 229 13-269 586-826 (1226)
287 cd07831 STKc_MOK Catalytic dom 99.9 1.3E-25 2.8E-30 203.9 13.4 184 13-226 10-203 (282)
288 cd06659 STKc_PAK6 Catalytic do 99.9 2.3E-25 5E-30 204.9 14.8 183 11-225 30-220 (297)
289 cd06652 STKc_MEKK2 Catalytic d 99.9 8.7E-25 1.9E-29 197.1 18.3 184 12-224 12-211 (265)
290 cd05118 STKc_CMGC Catalytic do 99.9 1.4E-25 2.9E-30 203.7 13.1 186 13-226 10-203 (283)
291 cd05082 PTKc_Csk Catalytic dom 99.9 8.2E-25 1.8E-29 196.3 18.0 178 12-223 16-201 (256)
292 cd07840 STKc_CDK9_like Catalyt 99.9 1.5E-25 3.2E-30 203.7 13.3 188 11-226 8-206 (287)
293 cd06636 STKc_MAP4K4_6 Catalyti 99.9 9.9E-25 2.1E-29 198.5 18.7 184 11-224 25-228 (282)
294 cd08530 STKc_CNK2-like Catalyt 99.9 3.8E-25 8.2E-30 197.7 15.6 189 12-225 10-204 (256)
295 KOG0983|consensus 99.9 8.6E-26 1.9E-30 196.6 10.9 187 13-226 103-298 (391)
296 cd05098 PTKc_FGFR1 Catalytic d 99.9 5.5E-25 1.2E-29 203.1 17.1 188 12-224 28-245 (307)
297 cd06630 STKc_MEKK1 Catalytic d 99.9 8.3E-25 1.8E-29 197.1 17.9 184 11-223 9-209 (268)
298 cd07852 STKc_MAPK15 Catalytic 99.9 4.5E-25 9.7E-30 206.4 16.4 185 12-226 17-217 (337)
299 cd05058 PTKc_Met_Ron Catalytic 99.9 5.3E-25 1.1E-29 197.9 16.3 185 11-223 4-204 (262)
300 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.1E-24 2.4E-29 196.7 18.3 182 12-224 5-212 (262)
301 cd05103 PTKc_VEGFR2 Catalytic 99.9 7.8E-25 1.7E-29 205.5 18.0 188 12-224 17-284 (343)
302 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 6.2E-25 1.3E-29 199.7 16.7 167 28-225 45-225 (274)
303 cd06626 STKc_MEKK4 Catalytic d 99.9 1.3E-24 2.9E-29 195.2 18.7 185 12-225 10-209 (264)
304 cd05111 PTK_HER3 Pseudokinase 99.9 1.1E-24 2.3E-29 198.5 18.3 185 12-225 17-215 (279)
305 cd05069 PTKc_Yes Catalytic dom 99.9 8.4E-25 1.8E-29 196.8 17.4 183 12-225 16-207 (260)
306 cd06616 PKc_MKK4 Catalytic dom 99.9 1E-24 2.2E-29 199.1 18.0 187 12-224 14-212 (288)
307 cd05097 PTKc_DDR_like Catalyti 99.9 1.2E-24 2.5E-29 199.7 18.5 189 11-224 14-235 (295)
308 cd06623 PKc_MAPKK_plant_like C 99.9 8.6E-25 1.9E-29 196.3 17.3 185 12-226 11-204 (264)
309 cd06608 STKc_myosinIII_like Ca 99.9 1.2E-24 2.6E-29 196.3 18.0 185 12-224 16-220 (275)
310 cd06632 STKc_MEKK1_plant Catal 99.9 1E-24 2.2E-29 195.2 17.3 183 12-223 10-203 (258)
311 cd06631 STKc_YSK4 Catalytic do 99.9 1.1E-24 2.4E-29 196.3 17.6 183 12-224 10-210 (265)
312 cd07879 STKc_p38delta_MAPK13 C 99.9 1.5E-25 3.3E-30 210.2 12.4 183 12-226 25-219 (342)
313 cd05056 PTKc_FAK Catalytic dom 99.9 1.3E-24 2.9E-29 196.4 18.1 239 11-311 15-266 (270)
314 cd07838 STKc_CDK4_6_like Catal 99.9 5E-25 1.1E-29 200.4 15.5 188 11-226 8-210 (287)
315 cd05092 PTKc_TrkA Catalytic do 99.9 1.1E-24 2.4E-29 198.3 17.6 187 12-224 15-227 (280)
316 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3E-24 6.5E-29 195.5 20.4 179 11-218 13-208 (284)
317 cd07834 STKc_MAPK Catalytic do 99.9 1.2E-25 2.5E-30 209.5 11.3 187 12-226 10-211 (330)
318 KOG1095|consensus 99.9 6.4E-25 1.4E-29 223.2 17.4 232 12-299 702-951 (1025)
319 cd05071 PTKc_Src Catalytic dom 99.9 1E-24 2.2E-29 196.7 17.0 183 12-225 16-207 (262)
320 cd06651 STKc_MEKK3 Catalytic d 99.9 1.9E-24 4E-29 195.2 18.7 184 12-224 12-211 (266)
321 cd06641 STKc_MST3 Catalytic do 99.9 3E-24 6.6E-29 195.0 20.2 182 12-224 14-203 (277)
322 cd05057 PTKc_EGFR_like Catalyt 99.9 2.3E-24 4.9E-29 196.0 19.2 185 12-225 17-215 (279)
323 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.4E-24 3.1E-29 195.2 17.6 183 12-225 16-207 (260)
324 PF07714 Pkinase_Tyr: Protein 99.9 4.1E-25 8.8E-30 199.2 14.0 183 13-223 10-207 (259)
325 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.9E-24 4.2E-29 194.3 18.2 183 12-226 16-208 (260)
326 KOG1094|consensus 99.9 2.2E-25 4.8E-30 210.7 12.5 176 13-217 549-735 (807)
327 cd06610 STKc_OSR1_SPAK Catalyt 99.9 4.5E-24 9.8E-29 191.9 20.5 187 12-225 11-210 (267)
328 cd06624 STKc_ASK Catalytic dom 99.9 4.1E-24 8.8E-29 193.0 20.2 184 12-223 18-212 (268)
329 cd06639 STKc_myosinIIIB Cataly 99.9 2.7E-24 5.9E-29 196.6 19.3 185 12-224 32-235 (291)
330 cd07866 STKc_BUR1 Catalytic do 99.9 2.2E-25 4.7E-30 205.2 12.0 188 12-227 18-232 (311)
331 KOG4257|consensus 99.9 6.3E-25 1.4E-29 209.0 15.3 227 13-299 400-639 (974)
332 cd05074 PTKc_Tyro3 Catalytic d 99.9 1.1E-24 2.5E-29 196.9 16.4 241 12-309 9-271 (273)
333 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 4.5E-25 9.9E-30 198.4 13.6 181 12-223 5-207 (258)
334 cd05073 PTKc_Hck Catalytic dom 99.9 2.3E-24 4.9E-29 194.0 18.0 183 12-225 16-207 (260)
335 KOG2345|consensus 99.9 3.4E-25 7.3E-30 190.4 11.8 242 12-309 31-299 (302)
336 cd07849 STKc_ERK1_2_like Catal 99.9 3.1E-25 6.7E-30 207.5 12.7 183 12-225 15-213 (336)
337 cd08225 STKc_Nek5 Catalytic do 99.9 9.4E-25 2E-29 195.4 15.1 185 12-224 10-204 (257)
338 cd05122 PKc_STE Catalytic doma 99.9 4.5E-24 9.7E-29 189.5 19.3 184 12-225 10-200 (253)
339 cd05112 PTKc_Itk Catalytic dom 99.9 1.4E-24 3E-29 194.6 16.0 182 12-224 14-204 (256)
340 cd06612 STKc_MST1_2 Catalytic 99.9 2.7E-24 5.9E-29 192.3 17.8 181 12-224 13-201 (256)
341 cd07877 STKc_p38alpha_MAPK14 C 99.9 8.7E-25 1.9E-29 205.4 15.2 184 12-226 27-222 (345)
342 cd06629 STKc_MAPKKK_Bck1_like 99.9 2.9E-24 6.2E-29 194.3 18.1 183 12-223 11-213 (272)
343 cd05044 PTKc_c-ros Catalytic d 99.9 9.6E-25 2.1E-29 197.0 14.8 188 12-224 5-216 (269)
344 cd05046 PTK_CCK4 Pseudokinase 99.9 2.4E-24 5.1E-29 195.2 17.3 188 12-224 15-221 (275)
345 PTZ00024 cyclin-dependent prot 99.9 1.5E-24 3.4E-29 202.5 16.3 186 12-226 19-238 (335)
346 cd05034 PTKc_Src_like Catalyti 99.9 2E-24 4.4E-29 194.0 16.5 183 12-225 16-208 (261)
347 KOG4278|consensus 99.9 2.7E-25 5.9E-30 211.3 11.1 222 17-299 282-513 (1157)
348 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 9.1E-25 2E-29 203.9 14.6 184 12-226 20-210 (328)
349 cd06627 STKc_Cdc7_like Catalyt 99.9 5E-24 1.1E-28 190.0 18.8 184 12-224 10-201 (254)
350 cd07880 STKc_p38gamma_MAPK12 C 99.9 6.7E-25 1.4E-29 206.0 13.8 184 12-226 25-220 (343)
351 cd07857 STKc_MPK1 Catalytic do 99.9 7.8E-25 1.7E-29 204.4 14.0 186 12-226 10-214 (332)
352 cd05613 STKc_MSK1_N N-terminal 99.9 4.2E-24 9E-29 195.3 18.5 184 12-225 10-211 (290)
353 cd05110 PTKc_HER4 Catalytic do 99.9 2.5E-24 5.5E-29 198.4 16.9 186 11-225 16-215 (303)
354 cd08528 STKc_Nek10 Catalytic d 99.9 4.8E-24 1E-28 192.5 18.1 187 12-223 10-214 (269)
355 cd08226 PK_STRAD_beta Pseudoki 99.9 2.2E-24 4.9E-29 201.0 16.4 189 11-226 9-214 (328)
356 cd06648 STKc_PAK_II Catalytic 99.9 6.6E-24 1.4E-28 193.9 18.9 181 12-224 29-217 (285)
357 cd05043 PTK_Ryk Pseudokinase d 99.9 2.9E-24 6.3E-29 195.2 16.4 189 12-225 16-223 (280)
358 cd05576 STKc_RPK118_like Catal 99.9 3.1E-24 6.8E-29 190.8 16.0 170 13-218 4-179 (237)
359 cd06618 PKc_MKK7 Catalytic dom 99.9 6E-24 1.3E-28 195.0 18.3 184 12-224 25-220 (296)
360 cd06653 STKc_MEKK3_like_1 Cata 99.9 7E-24 1.5E-28 191.2 18.3 184 12-224 12-211 (264)
361 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.1E-23 2.3E-28 191.4 19.4 251 12-309 14-282 (284)
362 cd06657 STKc_PAK4 Catalytic do 99.9 3.8E-24 8.3E-29 196.4 16.2 182 12-225 30-219 (292)
363 KOG0984|consensus 99.9 3.7E-25 8E-30 185.6 8.5 186 12-222 56-252 (282)
364 cd07851 STKc_p38 Catalytic dom 99.9 4.9E-25 1.1E-29 206.8 10.4 185 11-226 24-220 (343)
365 cd06614 STKc_PAK Catalytic dom 99.9 1.4E-23 3E-28 191.5 19.3 182 12-224 29-218 (286)
366 cd07829 STKc_CDK_like Catalyti 99.9 9.4E-25 2E-29 198.1 11.2 187 12-226 9-203 (282)
367 KOG0603|consensus 99.9 2.7E-24 6E-29 206.0 14.6 217 13-270 333-558 (612)
368 PHA03390 pk1 serine/threonine- 99.9 1.1E-23 2.3E-28 190.8 17.8 177 11-225 25-209 (267)
369 cd05123 STKc_AGC Catalytic dom 99.9 6.2E-24 1.3E-28 189.3 15.8 186 12-226 3-197 (250)
370 cd06647 STKc_PAK_I Catalytic d 99.9 1.6E-23 3.4E-28 192.3 18.8 183 12-226 29-219 (293)
371 KOG0587|consensus 99.9 9.5E-24 2.1E-28 207.7 18.2 183 11-224 28-230 (953)
372 cd05083 PTKc_Chk Catalytic dom 99.9 1.3E-23 2.8E-28 188.3 17.6 180 12-225 16-201 (254)
373 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.6E-24 3.5E-29 203.3 12.2 184 12-226 15-223 (342)
374 cd06606 STKc_MAPKKK Catalytic 99.9 2.4E-23 5.3E-28 185.5 18.4 186 11-225 9-206 (260)
375 cd05581 STKc_PDK1 Catalytic do 99.9 4.7E-24 1E-28 193.1 13.5 187 11-226 10-226 (280)
376 KOG1006|consensus 99.9 1.6E-25 3.5E-30 194.2 3.2 191 12-226 74-273 (361)
377 KOG0664|consensus 99.9 7.5E-26 1.6E-30 197.0 -0.6 187 13-227 64-263 (449)
378 cd07830 STKc_MAK_like Catalyti 99.9 7.5E-24 1.6E-28 192.5 12.6 186 12-226 9-203 (283)
379 PHA02882 putative serine/threo 99.9 6E-23 1.3E-27 188.5 17.8 186 12-226 22-237 (294)
380 KOG0665|consensus 99.9 2.5E-24 5.3E-29 191.1 7.1 182 17-228 31-223 (369)
381 cd05583 STKc_MSK_N N-terminal 99.9 5.7E-23 1.2E-27 187.6 16.1 184 12-224 10-210 (288)
382 cd05610 STKc_MASTL Catalytic d 99.9 1.2E-22 2.6E-27 206.2 17.4 159 11-197 13-175 (669)
383 cd08222 STKc_Nek11 Catalytic d 99.9 7.3E-23 1.6E-27 183.9 13.2 186 12-223 10-206 (260)
384 KOG1152|consensus 99.9 1.4E-23 3E-28 198.5 8.0 166 15-209 574-754 (772)
385 KOG0199|consensus 99.9 1.5E-22 3.2E-27 195.0 13.3 228 12-299 120-362 (1039)
386 PLN00113 leucine-rich repeat r 99.9 8.9E-22 1.9E-26 208.2 19.4 173 12-222 700-878 (968)
387 PRK09188 serine/threonine prot 99.9 6E-22 1.3E-26 185.7 15.6 147 12-197 28-191 (365)
388 KOG0576|consensus 99.9 1.6E-23 3.4E-28 200.9 4.6 227 13-270 26-266 (829)
389 smart00220 S_TKc Serine/Threon 99.9 8E-22 1.7E-26 173.6 14.8 180 15-224 2-188 (244)
390 KOG3653|consensus 99.9 7.6E-22 1.6E-26 183.1 14.7 178 11-216 219-419 (534)
391 KOG1025|consensus 99.9 1.4E-22 3.1E-27 198.0 8.8 238 14-312 708-962 (1177)
392 KOG0671|consensus 99.9 7.4E-22 1.6E-26 179.0 11.3 282 13-331 100-413 (415)
393 PLN03225 Serine/threonine-prot 99.9 3.6E-21 7.8E-26 191.4 13.5 160 12-197 142-328 (566)
394 KOG1027|consensus 99.9 9.3E-22 2E-26 193.0 9.1 218 17-270 525-762 (903)
395 KOG0200|consensus 99.9 5.1E-21 1.1E-25 192.0 14.5 187 13-224 307-524 (609)
396 cd05147 RIO1_euk RIO kinase fa 99.9 3.3E-21 7.2E-26 166.0 10.9 138 12-181 7-170 (190)
397 smart00221 STYKc Protein kinas 99.8 2E-20 4.3E-25 163.4 14.6 184 12-224 9-202 (225)
398 cd05145 RIO1_like RIO kinase f 99.8 1.8E-20 4E-25 161.4 13.3 138 12-181 7-170 (190)
399 KOG0668|consensus 99.8 1.2E-20 2.5E-25 161.0 9.7 253 17-329 53-327 (338)
400 cd00180 PKc Catalytic domain o 99.8 4.1E-19 8.9E-24 152.3 18.5 159 12-198 3-165 (215)
401 PLN03224 probable serine/threo 99.8 1.4E-19 3E-24 176.6 17.0 169 11-198 154-382 (507)
402 KOG1345|consensus 99.8 9.1E-21 2E-25 165.2 7.3 181 13-226 35-229 (378)
403 KOG1164|consensus 99.8 1.4E-17 3E-22 155.2 15.3 187 11-226 27-241 (322)
404 KOG0670|consensus 99.7 1.5E-18 3.2E-23 162.9 7.1 188 17-227 447-640 (752)
405 PRK10345 hypothetical protein; 99.7 2.4E-17 5.1E-22 143.8 13.7 129 12-176 12-157 (210)
406 KOG1163|consensus 99.7 9.7E-18 2.1E-22 144.2 10.7 184 13-227 26-226 (341)
407 PRK10359 lipopolysaccharide co 99.7 1.3E-17 2.9E-22 146.3 9.3 131 12-181 41-187 (232)
408 PRK12274 serine/threonine prot 99.7 6.9E-17 1.5E-21 139.2 13.5 129 11-180 11-144 (218)
409 PLN00181 protein SPA1-RELATED; 99.7 9.5E-18 2.1E-22 174.0 5.8 131 72-222 36-215 (793)
410 smart00090 RIO RIO-like kinase 99.7 1.7E-16 3.6E-21 141.4 12.5 140 12-181 38-201 (237)
411 KOG1165|consensus 99.7 3E-16 6.5E-21 140.6 13.9 186 12-228 38-242 (449)
412 KOG1167|consensus 99.7 6.8E-17 1.5E-21 148.6 9.7 181 12-227 46-283 (418)
413 PRK14879 serine/threonine prot 99.7 3.7E-16 7.9E-21 136.4 13.4 132 11-177 5-143 (211)
414 COG0515 SPS1 Serine/threonine 99.7 9.2E-16 2E-20 139.3 16.3 187 12-226 10-215 (384)
415 cd05144 RIO2_C RIO kinase fami 99.7 2.8E-16 6.1E-21 136.1 12.1 135 11-182 24-179 (198)
416 TIGR03724 arch_bud32 Kae1-asso 99.7 5.6E-16 1.2E-20 134.0 13.2 130 11-178 3-139 (199)
417 KOG0603|consensus 99.7 1.7E-17 3.6E-22 159.6 2.4 214 20-270 15-233 (612)
418 KOG0590|consensus 99.6 7.8E-17 1.7E-21 160.5 4.0 182 17-226 333-529 (601)
419 PRK09605 bifunctional UGMP fam 99.6 3.8E-15 8.3E-20 148.0 13.7 129 12-179 343-478 (535)
420 cd05119 RIO RIO kinase family, 99.6 3.4E-15 7.3E-20 127.8 11.6 138 11-181 6-167 (187)
421 PRK01723 3-deoxy-D-manno-octul 99.6 1.3E-14 2.8E-19 129.5 12.3 133 11-179 44-193 (239)
422 KOG1290|consensus 99.6 1.2E-14 2.6E-19 135.9 10.2 126 13-161 89-221 (590)
423 cd05120 APH_ChoK_like Aminogly 99.6 3.7E-14 8E-19 115.7 12.1 129 11-177 7-138 (155)
424 KOG4158|consensus 99.5 2.2E-14 4.7E-19 131.6 10.2 165 82-270 316-505 (598)
425 PF14531 Kinase-like: Kinase-l 99.5 4.3E-13 9.2E-18 121.4 11.7 201 11-228 21-256 (288)
426 KOG0606|consensus 99.4 9.6E-14 2.1E-18 140.3 5.8 134 120-270 151-307 (1205)
427 KOG1024|consensus 99.4 5.3E-13 1.2E-17 122.2 8.1 186 12-222 294-499 (563)
428 PRK04750 ubiB putative ubiquin 99.4 6.8E-13 1.5E-17 130.2 7.8 140 11-181 128-317 (537)
429 TIGR01982 UbiB 2-polyprenylphe 99.4 5.2E-12 1.1E-16 122.2 11.5 140 12-181 127-310 (437)
430 smart00750 KIND kinase non-cat 99.3 6.5E-12 1.4E-16 106.1 10.6 87 110-224 15-106 (176)
431 KOG1166|consensus 99.3 2.8E-12 6.2E-17 131.5 8.4 155 12-198 708-875 (974)
432 cd05151 ChoK Choline Kinase (C 99.3 2.4E-11 5.3E-16 102.0 10.0 127 13-177 9-136 (170)
433 KOG1240|consensus 99.3 1.5E-12 3.3E-17 132.1 2.1 216 15-270 36-286 (1431)
434 cd05146 RIO3_euk RIO kinase fa 99.2 2.3E-10 4.9E-15 98.5 12.7 133 16-181 11-177 (197)
435 cd01240 PH_beta-ARK Beta adren 99.2 3.5E-12 7.5E-17 95.7 -0.8 115 190-315 2-116 (116)
436 KOG0590|consensus 99.0 4.9E-11 1.1E-15 119.2 0.4 166 17-209 35-215 (601)
437 PF01163 RIO1: RIO1 family; I 99.0 4.3E-09 9.4E-14 90.1 12.3 131 17-181 1-159 (188)
438 KOG1023|consensus 99.0 1.3E-09 2.8E-14 105.0 9.4 146 55-227 1-163 (484)
439 cd05154 ACAD10_11_like Acyl-Co 99.0 8.1E-09 1.8E-13 90.2 13.2 149 13-176 9-205 (223)
440 KOG0601|consensus 99.0 9.5E-10 2.1E-14 106.2 6.7 172 11-209 125-311 (524)
441 KOG1033|consensus 98.9 1.3E-10 2.9E-15 110.4 0.3 114 83-217 330-458 (516)
442 KOG0195|consensus 98.9 6.4E-10 1.4E-14 97.9 4.0 180 9-226 204-393 (448)
443 COG3642 Mn2+-dependent serine/ 98.9 1.1E-08 2.5E-13 85.8 11.2 98 42-176 40-139 (204)
444 KOG3087|consensus 98.9 1.5E-08 3.2E-13 85.0 11.6 131 17-176 22-164 (229)
445 KOG1243|consensus 98.9 1.9E-08 4.2E-13 98.5 13.1 138 11-181 20-158 (690)
446 PRK15123 lipopolysaccharide co 98.8 7.9E-08 1.7E-12 87.0 12.4 127 26-177 44-194 (268)
447 PF06293 Kdo: Lipopolysacchari 98.6 3.8E-07 8.2E-12 79.5 11.6 143 11-179 16-172 (206)
448 KOG1266|consensus 98.6 9.2E-09 2E-13 93.0 0.5 188 17-228 81-289 (458)
449 KOG3741|consensus 98.6 3.9E-07 8.4E-12 87.2 10.6 140 17-182 291-447 (655)
450 KOG0601|consensus 98.5 5.6E-08 1.2E-12 94.1 4.2 134 17-177 280-416 (524)
451 COG0478 RIO-like serine/threon 98.3 3.8E-06 8.3E-11 74.9 10.1 122 17-176 106-250 (304)
452 KOG0606|consensus 98.3 2.4E-07 5.2E-12 94.9 1.9 231 12-270 814-1084(1205)
453 PF06176 WaaY: Lipopolysacchar 98.2 1.3E-05 2.8E-10 69.9 10.0 67 82-177 116-183 (229)
454 cd05150 APH Aminoglycoside 3'- 98.2 4.7E-05 1E-09 67.8 14.0 138 14-176 11-192 (244)
455 COG0661 AarF Predicted unusual 98.2 1.5E-05 3.2E-10 78.4 11.0 34 149-182 286-319 (517)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 6.4E-05 1.4E-09 66.5 14.0 139 13-176 12-181 (226)
457 KOG1235|consensus 98.0 3.7E-05 8.1E-10 75.5 10.3 140 14-182 173-359 (538)
458 PF01636 APH: Phosphotransfera 97.9 0.00021 4.5E-09 62.4 13.2 70 13-94 8-80 (239)
459 PRK09902 hypothetical protein; 97.9 6E-05 1.3E-09 65.4 9.2 111 45-178 63-180 (216)
460 cd05157 ETNK_euk Ethanolamine 97.8 0.0003 6.4E-09 62.2 12.1 30 147-176 170-200 (235)
461 PLN02876 acyl-CoA dehydrogenas 97.7 0.00069 1.5E-08 71.1 14.2 152 15-178 51-258 (822)
462 PF12260 PIP49_C: Protein-kina 97.7 0.00017 3.7E-09 61.8 8.0 104 49-178 7-112 (188)
463 TIGR02721 ycfN_thiK thiamine k 97.7 0.00048 1E-08 61.9 11.1 133 16-176 10-174 (256)
464 COG4248 Uncharacterized protei 97.7 0.00041 8.9E-09 65.5 10.6 128 83-226 84-226 (637)
465 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0009 1.9E-08 57.8 11.8 119 24-175 20-170 (199)
466 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00093 2E-08 59.2 11.6 32 145-176 162-193 (235)
467 cd05156 ChoK_euk Choline Kinas 97.5 0.00087 1.9E-08 61.7 11.1 32 145-176 177-212 (302)
468 COG1718 RIO1 Serine/threonine 97.5 0.001 2.2E-08 59.0 10.3 134 16-181 62-219 (268)
469 PLN02236 choline kinase 97.4 0.0025 5.5E-08 59.9 11.9 136 16-177 50-231 (344)
470 COG3173 Predicted aminoglycosi 97.3 0.0057 1.2E-07 56.7 12.8 146 15-178 38-229 (321)
471 PLN02421 phosphotransferase, a 97.2 0.004 8.8E-08 58.2 10.9 126 27-178 42-214 (330)
472 KOG0576|consensus 97.1 0.00039 8.4E-09 68.7 3.8 152 17-209 257-415 (829)
473 PRK10593 hypothetical protein; 96.9 0.025 5.5E-07 52.1 13.9 68 13-94 25-98 (297)
474 PF03881 Fructosamin_kin: Fruc 96.7 0.01 2.2E-07 54.3 9.4 60 25-94 38-97 (288)
475 COG2112 Predicted Ser/Thr prot 96.7 0.015 3.3E-07 49.0 9.2 119 16-178 36-156 (201)
476 cd05153 HomoserineK_II Homoser 96.6 0.019 4.2E-07 52.5 10.7 30 147-176 175-204 (296)
477 cd05610 STKc_MASTL Catalytic d 96.6 0.0016 3.5E-08 66.8 3.5 74 151-225 500-583 (669)
478 PRK09550 mtnK methylthioribose 96.5 0.12 2.7E-06 49.5 15.7 72 13-94 37-116 (401)
479 PF01633 Choline_kinase: Choli 96.4 0.011 2.4E-07 51.4 7.3 29 148-176 144-173 (211)
480 COG5072 ALK1 Serine/threonine 96.1 0.017 3.6E-07 54.1 6.8 74 80-177 297-370 (488)
481 KOG2137|consensus 95.8 0.0092 2E-07 59.7 3.9 132 120-267 107-257 (700)
482 PF05445 Pox_ser-thr_kin: Poxv 95.4 0.031 6.8E-07 51.9 5.6 79 85-179 247-348 (434)
483 KOG2268|consensus 95.3 0.021 4.5E-07 52.8 4.0 126 17-181 107-255 (465)
484 PF13095 FTA2: Kinetochore Sim 95.1 0.45 9.7E-06 41.2 11.6 118 16-175 52-206 (207)
485 PRK11768 serine/threonine prot 95.1 0.23 5E-06 46.3 10.7 27 148-176 197-223 (325)
486 PLN02756 S-methyl-5-thioribose 94.6 0.43 9.2E-06 45.9 11.1 30 146-176 229-258 (418)
487 PTZ00296 choline kinase; Provi 94.5 0.54 1.2E-05 45.9 11.9 31 146-177 283-313 (442)
488 KOG2270|consensus 94.5 0.52 1.1E-05 44.6 11.0 136 14-182 156-318 (520)
489 PRK06148 hypothetical protein; 94.4 1.2 2.6E-05 48.1 15.3 29 148-176 204-235 (1013)
490 COG3001 Uncharacterized protei 94.1 0.8 1.7E-05 40.5 10.8 72 13-94 24-96 (286)
491 PRK05231 homoserine kinase; Pr 94.0 0.034 7.5E-07 51.5 2.4 29 148-176 188-216 (319)
492 PTZ00384 choline kinase; Provi 94.0 0.42 9.1E-06 45.7 9.8 30 147-177 227-256 (383)
493 PRK10271 thiK thiamine kinase; 94.0 0.046 1E-06 46.7 2.9 29 148-177 78-106 (188)
494 cd05152 MPH2' Macrolide 2'-Pho 93.8 0.055 1.2E-06 49.3 3.3 35 144-178 182-217 (276)
495 TIGR00938 thrB_alt homoserine 93.7 0.071 1.5E-06 49.2 3.9 29 148-176 188-216 (307)
496 KOG1826|consensus 93.6 0.013 2.7E-07 63.8 -1.4 146 44-209 1272-1425(2724)
497 TIGR02906 spore_CotS spore coa 93.4 0.22 4.7E-06 45.8 6.6 29 147-176 187-215 (313)
498 smart00587 CHK ZnF_C4 abd HLH 92.2 0.13 2.9E-06 44.2 3.2 30 147-176 120-154 (196)
499 PF07387 Seadorna_VP7: Seadorn 92.1 0.77 1.7E-05 40.5 7.6 86 47-174 104-189 (308)
500 PHA03111 Ser/Thr kinase; Provi 91.8 0.55 1.2E-05 43.7 6.7 68 84-164 250-319 (444)
No 1
>KOG0598|consensus
Probab=100.00 E-value=3.3e-41 Score=303.75 Aligned_cols=231 Identities=18% Similarity=0.250 Sum_probs=192.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+|+.|+|+.++.++|++.+|+|++++... +....++...|..||..++||.| |+++..|+++..+|+|+||
T Consensus 35 kG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFi--------v~l~ysFQt~~kLylVld~ 106 (357)
T KOG0598|consen 35 KGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFI--------VKLIYSFQTEEKLYLVLDY 106 (357)
T ss_pred ccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcE--------eeeEEecccCCeEEEEEec
Confidence 68999999999999999999999998876 44455678889999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.||.-+.+..+.+.+.+....+++ .+|+.||.|||+++ ||||||||+|||+|.+|+++|+
T Consensus 107 ~~GGeLf~hL~~eg~F~E~~arfYl---aEi~lAL~~LH~~g----------------IiyRDlKPENILLd~~GHi~Lt 167 (357)
T KOG0598|consen 107 LNGGELFYHLQREGRFSEDRARFYL---AEIVLALGYLHSKG----------------IIYRDLKPENILLDEQGHIKLT 167 (357)
T ss_pred cCCccHHHHHHhcCCcchhHHHHHH---HHHHHHHHHHHhCC----------------eeeccCCHHHeeecCCCcEEEe
Confidence 9999444444445577666666655 49999999999999 9999999999999999999999
Q ss_pred ecccccccCCC--CCCccccCcccccccc-ccccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccccc
Q psy6542 171 DLGLACDFSKK--KPHASVESDCILHGYI-KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQ 244 (334)
Q Consensus 171 DFGla~~~~~~--~~~~~~~t~~~~~~~v-~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (334)
|||||+..... .+.++|||+.||+||+ ...+|..+.||| ++++.|..+.+||.+.+.....+.+...... .++
T Consensus 168 DFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~-~~p 246 (357)
T KOG0598|consen 168 DFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP-LPP 246 (357)
T ss_pred ccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC-CCC
Confidence 99999955444 4677899999999998 467899999999 4455556678899999877677777776643 333
Q ss_pred ccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 245 DLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 245 ~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..++..+.+.+...+.++|..|++.+
T Consensus 247 ~~ls~~ardll~~LL~rdp~~RLg~~ 272 (357)
T KOG0598|consen 247 GYLSEEARDLLKKLLKRDPRQRLGGP 272 (357)
T ss_pred ccCCHHHHHHHHHHhccCHHHhcCCC
Confidence 54555677888888899999999743
No 2
>KOG0615|consensus
Probab=100.00 E-value=4.7e-39 Score=292.50 Aligned_cols=228 Identities=19% Similarity=0.157 Sum_probs=173.1
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcch-----HHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHES-----RVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~-----~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
|....|.+|..+.||+.||||++++..... ......++|++||++|+|||| |+++++|+..+..|||
T Consensus 183 Gafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~I--------V~~~d~f~~~ds~YmV 254 (475)
T KOG0615|consen 183 GAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNI--------VRIKDFFEVPDSSYMV 254 (475)
T ss_pred CceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCE--------EEEeeeeecCCceEEE
Confidence 445699999999999999999999876521 122245799999999999999 9999999999999999
Q ss_pred EEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-
Q psy6542 88 GVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH- 164 (334)
Q Consensus 88 mEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~- 164 (334)
|||++|| ++++..++ ...+... ..++.|++.|+.|||++| |+||||||+|||++.+
T Consensus 255 lE~v~GGeLfd~vv~nk--~l~ed~~---K~~f~Qll~avkYLH~~G----------------I~HRDiKPeNILl~~~~ 313 (475)
T KOG0615|consen 255 LEYVEGGELFDKVVANK--YLREDLG---KLLFKQLLTAVKYLHSQG----------------IIHRDIKPENILLSNDA 313 (475)
T ss_pred EEEecCccHHHHHHhcc--ccccchh---HHHHHHHHHHHHHHHHcC----------------cccccCCcceEEeccCC
Confidence 9999999 66666654 3333233 344569999999999999 9999999999999877
Q ss_pred --CCEEEEecccccccCCCC-CCccccCcccccccccc-cc---CC-cceeeh--hHHHHHcCCCCCCCCCCCCC-cccc
Q psy6542 165 --GHVRISDLGLACDFSKKK-PHASVESDCILHGYIKK-LG---GP-FVSAWQ--TRYAKLFPNRLELHPESGQS-KPEL 233 (334)
Q Consensus 165 --~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~-~~---~~-~~~~w~--~~~~~l~~~~~~~~~~~~~~-~~~~ 233 (334)
..+||+|||+|+..+.+. ..+.|||+.|.+|||.. .+ |+ ..|.|| |+.+....+.+||.....+. ..+.
T Consensus 314 e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQ 393 (475)
T KOG0615|consen 314 EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQ 393 (475)
T ss_pred cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHH
Confidence 779999999999886554 57789999999999943 22 44 567788 66666677888998887665 5566
Q ss_pred hhcccccccccccccH---hHHHHHHHhhccCchhhcCCC
Q psy6542 234 IFMDQIEEVSQDLITV---KGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 234 i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~p~~r~~~~ 270 (334)
|..+.+--.+ ..|.- .+...|...+.-||..|.+..
T Consensus 394 I~~G~y~f~p-~~w~~Iseea~dlI~~mL~VdP~~R~s~~ 432 (475)
T KOG0615|consen 394 ILKGRYAFGP-LQWDRISEEALDLINWMLVVDPENRPSAD 432 (475)
T ss_pred HhcCcccccC-hhhhhhhHHHHHHHHHhhEeCcccCcCHH
Confidence 6666554332 22211 344455555556777666644
No 3
>KOG0581|consensus
Probab=100.00 E-value=3.8e-38 Score=284.07 Aligned_cols=184 Identities=16% Similarity=0.155 Sum_probs=155.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe-EEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS-HYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~-~~ivmEy 90 (334)
.++.+-||++.|+.|++.+|+|.+.. ..+....+++.+|++|++.++||+| |.+|++|..++. ++|+|||
T Consensus 89 ~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyI--------V~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 89 SGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYI--------VGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred cCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCe--------eeEeEEEEeCCceEEeehhh
Confidence 56788999999999999999999943 3456678889999999999999999 999999999985 9999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+|| ++.+.... +.. .+..+..++.|+++||.|||+ ++ ||||||||+|||++++|.||
T Consensus 160 MDgGSLd~~~k~~-g~i---~E~~L~~ia~~VL~GL~YLh~~~~----------------IIHRDIKPsNlLvNskGeVK 219 (364)
T KOG0581|consen 160 MDGGSLDDILKRV-GRI---PEPVLGKIARAVLRGLSYLHEERK----------------IIHRDIKPSNLLVNSKGEVK 219 (364)
T ss_pred cCCCCHHHHHhhc-CCC---CHHHHHHHHHHHHHHHHHHhhccC----------------eeeccCCHHHeeeccCCCEE
Confidence 9999 77664532 233 556667778899999999996 77 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||||.++.+..+...++.||..||+||-.. .++..+|+|+ +++|+ +.+++|+...
T Consensus 220 icDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~-a~GrfP~~~~ 280 (364)
T KOG0581|consen 220 ICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL-AIGRFPYPPP 280 (364)
T ss_pred eccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHH-hhCCCCCCCc
Confidence 9999999999888889999999999999643 3345688888 66666 5566676543
No 4
>KOG0616|consensus
Probab=100.00 E-value=2.5e-38 Score=277.17 Aligned_cols=228 Identities=18% Similarity=0.214 Sum_probs=190.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
-+|++||.+++++.+|.-+|+|++.+... .-.-.++..+|..+|+.+.||.+ +++++.+.+.+.+||||||
T Consensus 54 tGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFl--------v~l~~t~~d~~~lymvmey 125 (355)
T KOG0616|consen 54 TGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFL--------VKLYGTFKDNSNLYMVMEY 125 (355)
T ss_pred cCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCcee--------EEEEEeeccCCeEEEEEec
Confidence 37899999999999999999999997765 32334577889999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
++||.-+...++.+++++..+.++.. ||+.||+|||+.+ |++|||||+|||+|++|.+||+
T Consensus 126 v~GGElFS~Lrk~~rF~e~~arFYAA---eivlAleylH~~~----------------iiYRDLKPENiLlD~~G~iKit 186 (355)
T KOG0616|consen 126 VPGGELFSYLRKSGRFSEPHARFYAA---EIVLALEYLHSLD----------------IIYRDLKPENLLLDQNGHIKIT 186 (355)
T ss_pred cCCccHHHHHHhcCCCCchhHHHHHH---HHHHHHHHHHhcC----------------eeeccCChHHeeeccCCcEEEE
Confidence 99994444455566888877777665 9999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccc-ccccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccccc
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYI-KKLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQD 245 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v-~~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (334)
|||+|+..... +.+.||||.|++||+ ...+|.++.||| ++|||+ .+.+||+..+....++.|....+. +|+-
T Consensus 187 DFGFAK~v~~r-T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl-aG~pPF~~~~~~~iY~KI~~~~v~-fP~~ 263 (355)
T KOG0616|consen 187 DFGFAKRVSGR-TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML-AGYPPFYDDNPIQIYEKILEGKVK-FPSY 263 (355)
T ss_pred eccceEEecCc-EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH-cCCCCCcCCChHHHHHHHHhCccc-CCcc
Confidence 99999977655 778899999999997 678899999999 555655 466799898877777777777664 5545
Q ss_pred cccHhHHHHHHHhhccCchhhcCCC
Q psy6542 246 LITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 246 ~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
+.+ ...+.+...+..|-..|+++.
T Consensus 264 fs~-~~kdLl~~LL~vD~t~R~gnl 287 (355)
T KOG0616|consen 264 FSS-DAKDLLKKLLQVDLTKRFGNL 287 (355)
T ss_pred cCH-HHHHHHHHHHhhhhHhhhcCc
Confidence 553 345556666678999998876
No 5
>KOG0694|consensus
Probab=100.00 E-value=7.9e-38 Score=300.15 Aligned_cols=228 Identities=16% Similarity=0.185 Sum_probs=190.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
|||+++|++|..+.+++.+|||++++... .+........|.+|+.... ||.+ +++|..|++.+++|+|||
T Consensus 378 kGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL--------~~L~~~fQT~~~l~fvme 449 (694)
T KOG0694|consen 378 RGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFL--------VNLFSCFQTKEHLFFVME 449 (694)
T ss_pred cCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeE--------eecccccccCCeEEEEEE
Confidence 79999999999999999999999999876 4445567888999998876 9999 999999999999999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+.||+ .+.-.....+++....++ +.+++.||+|||+++ ||+||||.+|||+|.+|++||
T Consensus 450 y~~Ggd-m~~~~~~~~F~e~rarfy---aAev~l~L~fLH~~~----------------IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 450 YVAGGD-LMHHIHTDVFSEPRARFY---AAEVVLGLQFLHENG----------------IIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred ecCCCc-EEEEEecccccHHHHHHH---HHHHHHHHHHHHhcC----------------ceeeecchhheEEcccCcEEe
Confidence 999995 322223345655555444 459999999999999 999999999999999999999
Q ss_pred Eeccccccc--CCCCCCccccCccccccccc-cccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDF--SKKKPHASVESDCILHGYIK-KLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~--~~~~~~~~~~t~~~~~~~v~-~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||+|+.. ....+.++||||.|++||++ ...|+.+.||| ++|+||. +..||.|++....++.|...++. .
T Consensus 510 ADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~-Gq~PF~gddEee~FdsI~~d~~~-y 587 (694)
T KOG0694|consen 510 ADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV-GESPFPGDDEEEVFDSIVNDEVR-Y 587 (694)
T ss_pred cccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHhcCCCC-C
Confidence 999999954 33456789999999999996 45599999999 6666665 55699999999999999888775 3
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
|..++ ..+..++...+.++|..|+++.
T Consensus 588 P~~ls-~ea~~il~~ll~k~p~kRLG~~ 614 (694)
T KOG0694|consen 588 PRFLS-KEAIAIMRRLLRKNPEKRLGSG 614 (694)
T ss_pred CCccc-HHHHHHHHHHhccCcccccCCC
Confidence 43333 3567788888899999999984
No 6
>KOG0595|consensus
Probab=100.00 E-value=3.1e-37 Score=280.71 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=154.0
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
-+++..-||+|+++.++..||||.+.+........+.+..|+.||+.++|||| |.++++..+++.+|+||||
T Consensus 19 G~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nI--------V~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 19 GSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNI--------VRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred cCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcce--------eeEEEEEecCCeEEEEEEe
Confidence 46788899999999999999999999988766677788899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-----
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH----- 164 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~----- 164 (334)
|+|| +...+... +...+...+. ++.||+.||++||+++ ||||||||+||||+..
T Consensus 91 C~gGDLs~yi~~~-~~l~e~t~r~---Fm~QLA~alq~L~~~~----------------IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 91 CNGGDLSDYIRRR-GRLPEATARH---FMQQLASALQFLHENN----------------IIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred CCCCCHHHHHHHc-CCCCHHHHHH---HHHHHHHHHHHHHHCC----------------eeeccCCcceEEeccCCCCCC
Confidence 9988 54443332 2554444444 4459999999999999 9999999999999775
Q ss_pred -CCEEEEecccccccCCCC-CCccccCccccccccc--cccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 165 -GHVRISDLGLACDFSKKK-PHASVESDCILHGYIK--KLGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 -~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~--~~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
-.+||+|||+|+.+.... ..+.|||+.||+|||. ..+.-++|.|+ ++|++ ..+.+||...+
T Consensus 151 ~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~-l~g~~Pf~a~t 218 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQC-LTGKPPFDAET 218 (429)
T ss_pred CceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHH-HhCCCCccccC
Confidence 358999999999887665 4678999999999995 34445677777 66666 45666887555
No 7
>KOG0591|consensus
Probab=100.00 E-value=1.7e-38 Score=276.51 Aligned_cols=237 Identities=16% Similarity=0.144 Sum_probs=186.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEE-EeecC-CeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYK-VTSEP-NSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~-~~~~~-~~~~ivmE 89 (334)
|+|+..||++.+..+|..||.|.+.-...+...++....|+.+|++|+|||| |++|+ .|..+ ..++||||
T Consensus 29 ~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNI--------VqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 29 RGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNI--------VQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred CCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchH--------HHHHHHhhhccchhhHHHHH
Confidence 7899999999999999999999999666677788888999999999999999 99997 55544 45999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||++| +..++.+-.......++..+|.++.|++.||..+|..-. + .-|+||||||+||+++.+|.||
T Consensus 101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~-r-----------~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP-R-----------GTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc-c-----------cceeeccCcchheEEcCCCcee
Confidence 99988 766666655555556788899999999999999999220 0 1189999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCccccccccc-cccCCc-ceeeh--hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIK-KLGGPF-VSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~-~~~~~~-~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
|+||||++.+..+. .++..|||+||+||+. ..+|.+ +|+|+ |+.+.|+.-+.||+|.+.....+.|-..+.++.
T Consensus 169 LGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPL 248 (375)
T ss_pred eccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCC
Confidence 99999999988876 4678999999999973 555654 55566 666666777889999986666777777777666
Q ss_pred ccccccHhHHHHHHHhhccCchhhcC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLT 268 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~ 268 (334)
|.+.........+..++..|+..|.+
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCC
Confidence 64433222223344444556666654
No 8
>KOG0575|consensus
Probab=100.00 E-value=2.2e-36 Score=287.06 Aligned_cols=229 Identities=16% Similarity=0.182 Sum_probs=186.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+|++-+||.+.+..+|+.||+|++.+... .....+.+.+|++|.+.|+|||| |++|++|++.+.+|||.|+
T Consensus 28 kGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnI--------V~f~~~FEDs~nVYivLEL 99 (592)
T KOG0575|consen 28 KGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNI--------VQFYHFFEDSNNVYIVLEL 99 (592)
T ss_pred cCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcE--------EeeeeEeecCCceEEEEEe
Confidence 57888999999999999999999998665 44456678889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+.+ +..+.+ ..+.+.|..+..+ +.||+.||.|||+++ |||||||..|++++++.+|||
T Consensus 100 C~~~sL~el~K-rrk~ltEpEary~---l~QIv~GlkYLH~~~----------------IiHRDLKLGNlfL~~~~~VKI 159 (592)
T KOG0575|consen 100 CHRGSLMELLK-RRKPLTEPEARYF---LRQIVEGLKYLHSLG----------------IIHRDLKLGNLFLNENMNVKI 159 (592)
T ss_pred cCCccHHHHHH-hcCCCCcHHHHHH---HHHHHHHHHHHHhcC----------------ceecccchhheeecCcCcEEe
Confidence 9998 666655 3446655444444 459999999999999 999999999999999999999
Q ss_pred EecccccccCCC--CCCccccCccccccccc-cccCC-cceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 170 SDLGLACDFSKK--KPHASVESDCILHGYIK-KLGGP-FVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 170 ~DFGla~~~~~~--~~~~~~~t~~~~~~~v~-~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
+|||||+.+..+ +..+.||||-|.+|||+ ..++. .+|+|+ |+++.|..|++||...+....+..|...++. .|
T Consensus 160 gDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~-~P 238 (592)
T KOG0575|consen 160 GDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS-MP 238 (592)
T ss_pred cccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc-cc
Confidence 999999977644 45778999999999995 45555 466666 7777778889999888766666666655554 45
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...+ ..+.+.|...+.++|..|.+..
T Consensus 239 ~~ls-~~A~dLI~~lL~~~P~~Rpsl~ 264 (592)
T KOG0575|consen 239 SHLS-AEAKDLIRKLLRPNPSERPSLD 264 (592)
T ss_pred cccC-HHHHHHHHHHhcCCcccCCCHH
Confidence 4333 3677788888888888887643
No 9
>KOG0593|consensus
Probab=100.00 E-value=3.9e-37 Score=270.39 Aligned_cols=189 Identities=21% Similarity=0.216 Sum_probs=160.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+|-+-|++|++++||+.||||.+.....+..+++-..+|+++|++|+|+|+ |.+..+|.....+++|+|||
T Consensus 12 EGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NL--------VnLiEVFrrkrklhLVFE~~ 83 (396)
T KOG0593|consen 12 EGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENL--------VNLIEVFRRKRKLHLVFEYC 83 (396)
T ss_pred cCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchH--------HHHHHHHHhcceeEEEeeec
Confidence 4677899999999999999999999888888899999999999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.. ++.+-+.. +.. +.+.+..+++|++.|+.|||+++ +|||||||+|||++.+|.+|||
T Consensus 84 dhTvL~eLe~~p-~G~---~~~~vk~~l~Q~l~ai~~cHk~n----------------~IHRDIKPENILit~~gvvKLC 143 (396)
T KOG0593|consen 84 DHTVLHELERYP-NGV---PSELVKKYLYQLLKAIHFCHKNN----------------CIHRDIKPENILITQNGVVKLC 143 (396)
T ss_pred chHHHHHHHhcc-CCC---CHHHHHHHHHHHHHHhhhhhhcC----------------eecccCChhheEEecCCcEEec
Confidence 999 66554433 233 44445566779999999999999 9999999999999999999999
Q ss_pred ecccccccCCC-C-CCccccCcccccccccc---ccCCcceeeh--hHHHHHcCCCCCCCCCCCC
Q psy6542 171 DLGLACDFSKK-K-PHASVESDCILHGYIKK---LGGPFVSAWQ--TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 171 DFGla~~~~~~-~-~~~~~~t~~~~~~~v~~---~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~ 228 (334)
|||+|+.+... . ...+..|-+|-+||+.. .++++.|+|+ |++..|..+.+-|.|.|+.
T Consensus 144 DFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi 208 (396)
T KOG0593|consen 144 DFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI 208 (396)
T ss_pred cchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence 99999988743 2 23456789999999853 3456677777 9998889888888888864
No 10
>KOG0600|consensus
Probab=100.00 E-value=9e-36 Score=277.07 Aligned_cols=188 Identities=21% Similarity=0.257 Sum_probs=161.3
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEEEccC
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIGVRQS 92 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivmEy~~ 92 (334)
..+||+|++..||+.||+|.++....+...-....+|+.||++|+|||| +++.+...+. ..+|+|+|||+
T Consensus 130 yg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNI--------ikL~eivt~~~~~siYlVFeYMd 201 (560)
T KOG0600|consen 130 YGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNI--------IKLEEIVTSKLSGSIYLVFEYMD 201 (560)
T ss_pred hhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcc--------cceeeEEEecCCceEEEEEeccc
Confidence 3489999999999999999999988777777778899999999999999 9999998876 68999999999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
+++.-+..+....+.+...++++. ||+.||+|||+++ |+|||||.+|||||++|.+||+||
T Consensus 202 hDL~GLl~~p~vkft~~qIKc~mk---QLl~Gl~~cH~~g----------------vlHRDIK~SNiLidn~G~LKiaDF 262 (560)
T KOG0600|consen 202 HDLSGLLSSPGVKFTEPQIKCYMK---QLLEGLEYCHSRG----------------VLHRDIKGSNILIDNNGVLKIADF 262 (560)
T ss_pred chhhhhhcCCCcccChHHHHHHHH---HHHHHHHHHhhcC----------------eeeccccccceEEcCCCCEEeccc
Confidence 998777777666787777777766 9999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCC---ccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCCCC
Q psy6542 173 GLACDFSKKKPH---ASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQS 229 (334)
Q Consensus 173 Gla~~~~~~~~~---~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~ 229 (334)
|||+.+...... +.+-|.+|-|||++ ..+++..|.|+ |++..|+.+.+.|.|.....
T Consensus 263 GLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve 327 (560)
T KOG0600|consen 263 GLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE 327 (560)
T ss_pred cceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH
Confidence 999977666532 23348999999984 34466777788 88888898998888876543
No 11
>KOG0659|consensus
Probab=100.00 E-value=5.3e-35 Score=252.80 Aligned_cols=259 Identities=15% Similarity=0.146 Sum_probs=189.6
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+-..-||+|.+.+||+.||||.++.....+.......+|++.|+.++|+|| +.+.|+|...+.+.+|+||++
T Consensus 13 G~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI--------i~LiD~F~~~~~l~lVfEfm~ 84 (318)
T KOG0659|consen 13 GTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI--------IELIDVFPHKSNLSLVFEFMP 84 (318)
T ss_pred cceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch--------hhhhhhccCCCceEEEEEecc
Confidence 455689999999999999999999987766667778899999999999999 999999999999999999999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
.+++.+++....-+.+.. +..|+.++++||+|||.+. |+||||||.|+|++++|.+||+||
T Consensus 85 tdLe~vIkd~~i~l~pa~---iK~y~~m~LkGl~y~H~~~----------------IlHRDlKPnNLLis~~g~lKiADF 145 (318)
T KOG0659|consen 85 TDLEVVIKDKNIILSPAD---IKSYMLMTLKGLAYCHSKW----------------ILHRDLKPNNLLISSDGQLKIADF 145 (318)
T ss_pred ccHHHHhcccccccCHHH---HHHHHHHHHHHHHHHHhhh----------------hhcccCCccceEEcCCCcEEeecc
Confidence 998888887766664444 4455669999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCc--cccCcccccccc---ccccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccccc
Q psy6542 173 GLACDFSKKKPHA--SVESDCILHGYI---KKLGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQD 245 (334)
Q Consensus 173 Gla~~~~~~~~~~--~~~t~~~~~~~v---~~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (334)
|+|+.+....... ..-|-+|-+||+ ++.+++..|+|+ |+++.|.-+.+.|.|.++..-...++..--.+ ..+
T Consensus 146 GLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP-~~~ 224 (318)
T KOG0659|consen 146 GLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTP-TPD 224 (318)
T ss_pred cchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCC-Ccc
Confidence 9999887665322 245788999997 567778889999 88888888888777877643333333222221 123
Q ss_pred cccHhHHHHHHHhh--ccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHH
Q psy6542 246 LITVKGEQCVQLKL--TRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGS 306 (334)
Q Consensus 246 ~~~~~~~~~i~~~~--~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~ 306 (334)
.|+. +.++-... ..-|...+.. .++..+.. .+.+.+.+...+|..|. +.+.|++
T Consensus 225 ~WP~--~~~lpdY~~~~~~P~~~~~~---lf~aas~d--~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 225 QWPE--MTSLPDYVKIQQFPKPPLNN---LFPAASSD--ALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCcc--ccccccHHHHhcCCCCcccc---ccccccHH--HHHHHHhhhccCchhcccHHHHhcc
Confidence 3322 11111100 1111111111 23333333 35577777777777777 5555543
No 12
>KOG0583|consensus
Probab=100.00 E-value=1.8e-34 Score=271.81 Aligned_cols=227 Identities=22% Similarity=0.242 Sum_probs=172.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc---hHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE---SRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~---~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.++..+|++|.+..+|..||||++.+.... ....+.+.+|+.+++.++ |||| +++++++.....+|||
T Consensus 27 ~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI--------~~l~ev~~t~~~~~iv 98 (370)
T KOG0583|consen 27 SGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNI--------IRLLEVFATPTKIYIV 98 (370)
T ss_pred CCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCE--------eEEEEEEecCCeEEEE
Confidence 467889999999999999999988765221 134557778999999999 9999 9999999999999999
Q ss_pred EEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-
Q psy6542 88 GVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH- 164 (334)
Q Consensus 88 mEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~- 164 (334)
||||.|| ++++.. .+++.+ ..+..++.|+++|++|||+++ |+||||||+|||++.+
T Consensus 99 mEy~~gGdL~~~i~~--~g~l~E---~~ar~~F~Qlisav~y~H~~g----------------i~HRDLK~ENilld~~~ 157 (370)
T KOG0583|consen 99 MEYCSGGDLFDYIVN--KGRLKE---DEARKYFRQLISAVAYCHSRG----------------IVHRDLKPENILLDGNE 157 (370)
T ss_pred EEecCCccHHHHHHH--cCCCCh---HHHHHHHHHHHHHHHHHHhCC----------------EeeCCCCHHHEEecCCC
Confidence 9999998 566644 335555 334455669999999999999 9999999999999999
Q ss_pred CCEEEEeccccccc--CCCCCCccccCcccccccccc----ccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhc
Q psy6542 165 GHVRISDLGLACDF--SKKKPHASVESDCILHGYIKK----LGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFM 236 (334)
Q Consensus 165 ~~vkl~DFGla~~~--~~~~~~~~~~t~~~~~~~v~~----~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~ 236 (334)
+++||+|||++... ......+.+||+.|++||+.. +.+..+|+|+ ++.+.|..+..||........+..+..
T Consensus 158 ~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~ 237 (370)
T KOG0583|consen 158 GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK 237 (370)
T ss_pred CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 99999999999988 345578899999999999943 2245788888 444555667778877665445554444
Q ss_pred cccccccccc-ccHhHHHHHH-HhhccCchhhcCCC
Q psy6542 237 DQIEEVSQDL-ITVKGEQCVQ-LKLTRDTRIVLTNP 270 (334)
Q Consensus 237 ~~~~~~~~~~-~~~~~~~~i~-~~~~~~p~~r~~~~ 270 (334)
..+ .++... + ....++. ..+..+|..|.+..
T Consensus 238 ~~~-~~p~~~~S--~~~~~Li~~mL~~~P~~R~t~~ 270 (370)
T KOG0583|consen 238 GEF-KIPSYLLS--PEARSLIEKMLVPDPSTRITLL 270 (370)
T ss_pred CCc-cCCCCcCC--HHHHHHHHHHcCCCcccCCCHH
Confidence 433 355444 3 2334444 44456777776654
No 13
>KOG0597|consensus
Probab=100.00 E-value=1.8e-35 Score=277.90 Aligned_cols=229 Identities=17% Similarity=0.141 Sum_probs=181.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++|+.+||+++.+.|.+.||||.+.+........+.+.+|++|++.++|||| |.|++.|++...+|+|+|||
T Consensus 12 ~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpni--------v~m~esfEt~~~~~vVte~a 83 (808)
T KOG0597|consen 12 EGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNI--------VEMLESFETSAHLWVVTEYA 83 (808)
T ss_pred CCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcch--------hhHHHhhcccceEEEEehhh
Confidence 6899999999999999999999999877755566788999999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.|++..++..+ ..+ ++..+..++.|+++||.|||+.+ |+|||+||.|||++..|++|+||
T Consensus 84 ~g~L~~il~~d-~~l---pEe~v~~~a~~LVsaL~yLhs~r----------------ilhrd~kPqniLl~~~~~~Klcd 143 (808)
T KOG0597|consen 84 VGDLFTILEQD-GKL---PEEQVRAIAYDLVSALYYLHSNR----------------ILHRDMKPQNILLEKGGTLKLCD 143 (808)
T ss_pred hhhHHHHHHhc-cCC---CHHHHHHHHHHHHHHHHHHHhcC----------------cccccCCcceeeecCCCceeech
Confidence 99865554543 233 45555667779999999999999 99999999999999999999999
Q ss_pred cccccccCCCCC--CccccCccccccccc-cccCCc-ceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccccc
Q psy6542 172 LGLACDFSKKKP--HASVESDCILHGYIK-KLGGPF-VSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQD 245 (334)
Q Consensus 172 FGla~~~~~~~~--~~~~~t~~~~~~~v~-~~~~~~-~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (334)
||+|+.+..... ...-|||.||+||+. ..+|.. +|.|+ |+.|.++.+++||+..+-...-..|..+.....+ .
T Consensus 144 Fg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~-~ 222 (808)
T KOG0597|consen 144 FGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS-T 222 (808)
T ss_pred hhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc-c
Confidence 999998876653 445689999999985 445665 55566 6666667788999988754444455555443222 2
Q ss_pred cccHhHHHHHHHhhccCchhhcCCC
Q psy6542 246 LITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 246 ~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+. .-...+...+.+||..|++=+
T Consensus 223 ~S~-~f~nfl~gLL~kdP~~RltW~ 246 (808)
T KOG0597|consen 223 ASS-SFVNFLQGLLIKDPAQRLTWT 246 (808)
T ss_pred ccH-HHHHHHHHHhhcChhhcccHH
Confidence 221 123456777789999998743
No 14
>KOG0690|consensus
Probab=100.00 E-value=2.6e-35 Score=261.06 Aligned_cols=229 Identities=17% Similarity=0.184 Sum_probs=191.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+-.++|-+++.+.||+.+|||++++.-. ......+...|-++|+..+||.+ ..+...|+.++++|+||||
T Consensus 178 kGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFL--------t~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 178 KGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFL--------TSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred CCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHH--------HHhhhhhccCceEEEEEEE
Confidence 45678999999999999999999998765 33344467789999999999999 8898899999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
..||.-+.+.+..+-+++....++-. +|++||.|||+++ |+.||||.+|+|+|++|++||+
T Consensus 250 anGGeLf~HLsrer~FsE~RtRFYGa---EIvsAL~YLHs~~----------------ivYRDlKLENLlLDkDGHIKit 310 (516)
T KOG0690|consen 250 ANGGELFFHLSRERVFSEDRTRFYGA---EIVSALGYLHSRN----------------IVYRDLKLENLLLDKDGHIKIT 310 (516)
T ss_pred ccCceEeeehhhhhcccchhhhhhhH---HHHHHhhhhhhCC----------------eeeeechhhhheeccCCceEee
Confidence 99994444455555676656655554 9999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccc-cccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIK-KLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~-~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|||||+.-.... ..++||||.|++|||+ +..|..+.||| ++|+|| ++++||+..+....+++|+.+++. +|
T Consensus 311 DFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm-CGRLPFyn~dh~kLFeLIl~ed~k-FP 388 (516)
T KOG0690|consen 311 DFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM-CGRLPFYNKDHEKLFELILMEDLK-FP 388 (516)
T ss_pred ecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHH-hccCcccccchhHHHHHHHhhhcc-CC
Confidence 999999654443 5678999999999996 57799999999 556664 567899999999999999999886 56
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...++ .++..+...+.+||..|++.-
T Consensus 389 r~ls~-eAktLLsGLL~kdP~kRLGgG 414 (516)
T KOG0690|consen 389 RTLSP-EAKTLLSGLLKKDPKKRLGGG 414 (516)
T ss_pred ccCCH-HHHHHHHHHhhcChHhhcCCC
Confidence 56664 466777888899999999865
No 15
>KOG0592|consensus
Probab=100.00 E-value=7.1e-35 Score=273.12 Aligned_cols=226 Identities=21% Similarity=0.247 Sum_probs=178.4
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
|-=.|++|.++.|++.||||++.+... .....+-...|-.+|.+| .||.| +++|..|++...+|+|+||+
T Consensus 85 SYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgi--------vkLy~TFQD~~sLYFvLe~A 156 (604)
T KOG0592|consen 85 SYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGI--------VKLYFTFQDEESLYFVLEYA 156 (604)
T ss_pred cceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCe--------EEEEEEeecccceEEEEEec
Confidence 333899999999999999999987655 333344666799999999 89999 99999999999999999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++| +++|.+ .+.+.+... ..++.||+.||+|||++| ||||||||+|||+++++++||
T Consensus 157 ~nGdll~~i~K--~Gsfde~ca---R~YAAeIldAleylH~~G----------------IIHRDlKPENILLd~dmhikI 215 (604)
T KOG0592|consen 157 PNGDLLDLIKK--YGSFDETCA---RFYAAEILDALEYLHSNG----------------IIHRDLKPENILLDKDGHIKI 215 (604)
T ss_pred CCCcHHHHHHH--hCcchHHHH---HHHHHHHHHHHHHHHhcC----------------ceeccCChhheeEcCCCcEEE
Confidence 999 455433 346655444 445569999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-------------C--CccccCcccccccccccc--CCcceeeh--hHHHHHcCCCCCCCCCCCCCc
Q psy6542 170 SDLGLACDFSKKK-------------P--HASVESDCILHGYIKKLG--GPFVSAWQ--TRYAKLFPNRLELHPESGQSK 230 (334)
Q Consensus 170 ~DFGla~~~~~~~-------------~--~~~~~t~~~~~~~v~~~~--~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~ 230 (334)
+|||.|+.+.... . .+++||..|.+||++... ++.+|.|. |+.+.|..|.+||.+.+..-.
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli 295 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI 295 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH
Confidence 9999999774432 1 347899999999996444 44555555 777777788999999886656
Q ss_pred ccchhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 231 PELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
++.|+.-++ .++.++.+ ...+.|...+..||..|+++.
T Consensus 296 FqkI~~l~y-~fp~~fp~-~a~dLv~KLLv~dp~~Rlt~~ 333 (604)
T KOG0592|consen 296 FQKIQALDY-EFPEGFPE-DARDLIKKLLVRDPSDRLTSQ 333 (604)
T ss_pred HHHHHHhcc-cCCCCCCH-HHHHHHHHHHccCccccccHH
Confidence 665554444 46667764 456777778889999999975
No 16
>KOG0588|consensus
Probab=100.00 E-value=4.2e-34 Score=273.14 Aligned_cols=226 Identities=20% Similarity=0.218 Sum_probs=175.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCC-cchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRP-HESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~-~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.|+.++|.+|++.+||+.+|||++.+.. ........+.+|+-||+.+.|||+ +++|++++++..+|+|.||
T Consensus 22 ~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV--------l~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 22 KGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV--------LRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred CCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe--------eeeeeeeccCceEEEEEEe
Confidence 4677799999999999999999999874 355556678889999999999999 9999999999999999999
Q ss_pred cCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|| ++++...+ .+.+ ...+.++.||+.|+.|||..+ |+||||||+|+|++.++.+|
T Consensus 94 v~gGELFdylv~kG--~l~e---~eaa~ff~QIi~gv~yCH~~~----------------icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 94 VPGGELFDYLVRKG--PLPE---REAAHFFRQILDGVSYCHAFN----------------ICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred cCCchhHHHHHhhC--CCCC---HHHHHHHHHHHHHHHHHhhhc----------------ceeccCCchhhhhhcccCEe
Confidence 9999 56654443 4433 334455569999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC-CCccccCcccccccc---ccccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKKK-PHASVESDCILHGYI---KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~~-~~~~~~t~~~~~~~v---~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+|.....+. ..++||+|.|++||+ .++.+.++|+|+ ++|++ .++.+||..++-......+.. ..+.
T Consensus 153 IADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfAL-LtG~LPFdDdNir~LLlKV~~-G~f~ 230 (786)
T KOG0588|consen 153 IADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFAL-LTGKLPFDDDNIRVLLLKVQR-GVFE 230 (786)
T ss_pred eeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHH-HhCCCCCCCccHHHHHHHHHc-Cccc
Confidence 99999998665554 578999999999998 355577899999 44554 567889986653333333333 3333
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
.| .+.+....+.+...+.-||..|++-
T Consensus 231 MP-s~Is~eaQdLLr~ml~VDp~~RiT~ 257 (786)
T KOG0588|consen 231 MP-SNISSEAQDLLRRMLDVDPSTRITT 257 (786)
T ss_pred CC-CcCCHHHHHHHHHHhccCccccccH
Confidence 44 3333345555666667788888764
No 17
>KOG0610|consensus
Probab=100.00 E-value=2.2e-33 Score=255.82 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=184.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+..+.||+|+.+.++..+|+|++.+... ......+.+.|.+||++++||.+ +.+|..|+++..+|++|||
T Consensus 87 ~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFl--------PTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 87 CGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFL--------PTLYASFETDKYSCLVMEY 158 (459)
T ss_pred CCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCcc--------chhhheeeccceeEEEEec
Confidence 46678999999999999999999998776 34455688899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|.|| +..+... ..+.+++....+++. +++.||+|||-.| ||.|||||+|||+-++|++-
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaA---Evl~ALEYLHmlG----------------ivYRDLKPENILvredGHIM 219 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAA---EVLLALEYLHMLG----------------IVYRDLKPENILVREDGHIM 219 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHH---HHHHHHHHHHhhc----------------eeeccCCcceeEEecCCcEE
Confidence 9999 5554443 335677767776665 9999999999999 99999999999999999999
Q ss_pred EEecccccccCC-----------------------------------C-----------------------CCCccccCc
Q psy6542 169 ISDLGLACDFSK-----------------------------------K-----------------------KPHASVESD 190 (334)
Q Consensus 169 l~DFGla~~~~~-----------------------------------~-----------------------~~~~~~~t~ 190 (334)
|+||.|+..... . ++.+++||-
T Consensus 220 LsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGTh 299 (459)
T KOG0610|consen 220 LSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTH 299 (459)
T ss_pred eeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccc
Confidence 999999752200 0 123457888
Q ss_pred ccccccc-ccccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchh
Q psy6542 191 CILHGYI-KKLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRI 265 (334)
Q Consensus 191 ~~~~~~v-~~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 265 (334)
.|.+||+ ...|+..+.||| .+|||| .+.+||.|.+....+.-++...+.-..........++.|...+.+||..
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmL-yG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEML-YGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHH-hCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 9999998 567799999999 455555 4677999999887776666665432111222236778888888999999
Q ss_pred hcCCC
Q psy6542 266 VLTNP 270 (334)
Q Consensus 266 r~~~~ 270 (334)
|+++.
T Consensus 379 Rlg~~ 383 (459)
T KOG0610|consen 379 RLGSK 383 (459)
T ss_pred hhccc
Confidence 99965
No 18
>KOG0611|consensus
Probab=100.00 E-value=3.5e-34 Score=260.15 Aligned_cols=224 Identities=21% Similarity=0.225 Sum_probs=177.0
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+--++|.+|.....|..||||.|+++.. +....-++.+|++||+.|+|||| +++|.+|+..+.+.|||||.
T Consensus 64 GTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhI--------I~IyEVFENkdKIvivMEYa 135 (668)
T KOG0611|consen 64 GTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHI--------IQIYEVFENKDKIVIVMEYA 135 (668)
T ss_pred CcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCce--------eehhhhhcCCceEEEEEEec
Confidence 3456999999999999999999999887 44455688999999999999999 99999999999999999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.|| .|++..++ ++++ .....++.||++|+.|||.++ ++|||||.+|||+|.++++||
T Consensus 136 S~GeLYDYiSer~--~LsE---rEaRhfFRQIvSAVhYCHknr----------------VvHRDLKLENILLD~N~NiKI 194 (668)
T KOG0611|consen 136 SGGELYDYISERG--SLSE---REARHFFRQIVSAVHYCHKNR----------------VVHRDLKLENILLDQNNNIKI 194 (668)
T ss_pred CCccHHHHHHHhc--cccH---HHHHHHHHHHHHHHHHHhhcc----------------ceecccchhheeecCCCCeee
Confidence 999 56665543 4544 344456669999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-CCccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 170 SDLGLACDFSKKK-PHASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 170 ~DFGla~~~~~~~-~~~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
+||||+..+..+. ..++||++.|.+||+. ++.++..|.|+ ++.+.+..+..||.|.+.-..-..|..+.+.+ +
T Consensus 195 ADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE-P 273 (668)
T KOG0611|consen 195 ADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE-P 273 (668)
T ss_pred eccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC-C
Confidence 9999999887766 4679999999999983 44467889999 77777788888998887443333344443332 2
Q ss_pred cccccHhHHHHHHHhhccCchhhcC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLT 268 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~ 268 (334)
..-+ ...+.|.-.+.-+|..|-+
T Consensus 274 ~~PS--dA~gLIRwmLmVNP~RRAT 296 (668)
T KOG0611|consen 274 ETPS--DASGLIRWMLMVNPERRAT 296 (668)
T ss_pred CCCc--hHHHHHHHHHhcCcccchh
Confidence 2222 3455566666666766654
No 19
>KOG0663|consensus
Probab=100.00 E-value=9.1e-34 Score=252.07 Aligned_cols=191 Identities=17% Similarity=0.166 Sum_probs=160.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee--cCCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS--EPNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~--~~~~~~ivm 88 (334)
..++-+.||+|+++.|++.||+|.++.......+---..+|+.+|.+++|||| |.+-.+.. +-+.+||||
T Consensus 85 ~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NI--------V~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 85 EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNI--------VEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCe--------eeeEEEEeccccceeeeeH
Confidence 46788899999999999999999999888765566666789999999999999 99998887 446799999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|||+.++..+...-...+.....++++. |++.|+.|||++. |+||||||+|+|+++.|.+|
T Consensus 157 e~~EhDLksl~d~m~q~F~~~evK~L~~---QlL~glk~lH~~w----------------ilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 157 EYVEHDLKSLMETMKQPFLPGEVKTLML---QLLRGLKHLHDNW----------------ILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred HHHHhhHHHHHHhccCCCchHHHHHHHH---HHHHHHHHHhhce----------------eEecccchhheeeccCCcEE
Confidence 9999997666555555776666666554 9999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC--CccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP--HASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 169 l~DFGla~~~~~~~~--~~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~ 228 (334)
|+||||||.+++... ....-|.+|-+||++ ..+++..|+|+ |++..+..+.+-|.|.+..
T Consensus 218 iaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 218 IADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred ecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 999999999887742 223458999999984 45567788888 8888888888888888754
No 20
>KOG0605|consensus
Probab=100.00 E-value=1.2e-33 Score=264.86 Aligned_cols=228 Identities=17% Similarity=0.198 Sum_probs=176.2
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.||..+.||+|+.+.||..+|+|++++... ...-.+++..|-.||....+|.| |++|..|++.+++|+|||
T Consensus 150 gkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~v--------VKLyYsFQD~~~LYLiME 221 (550)
T KOG0605|consen 150 GKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWV--------VKLYYSFQDKEYLYLIME 221 (550)
T ss_pred ccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcE--------EEEEEEecCCCeeEEEEE
Confidence 368889999999999999999999998876 44445688889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|| ...++.. ...+.+....+++. +++.|++.||+.| +|||||||+|+|||..|++|
T Consensus 222 ylPGGD~mTLL~~-~~~L~e~~arfYia---E~vlAI~~iH~~g----------------yIHRDIKPdNlLiD~~GHiK 281 (550)
T KOG0605|consen 222 YLPGGDMMTLLMR-KDTLTEDWARFYIA---ETVLAIESIHQLG----------------YIHRDIKPDNLLIDAKGHIK 281 (550)
T ss_pred ecCCccHHHHHHh-cCcCchHHHHHHHH---HHHHHHHHHHHcC----------------cccccCChhheeecCCCCEe
Confidence 99999 3333232 23555555555554 9999999999999 99999999999999999999
Q ss_pred EEecccccccCCC-----------------------C--------------------------CCccccCcccccccc-c
Q psy6542 169 ISDLGLACDFSKK-----------------------K--------------------------PHASVESDCILHGYI-K 198 (334)
Q Consensus 169 l~DFGla~~~~~~-----------------------~--------------------------~~~~~~t~~~~~~~v-~ 198 (334)
|+|||||..+... . ..+.+|||-|++||| .
T Consensus 282 LSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll 361 (550)
T KOG0605|consen 282 LSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL 361 (550)
T ss_pred eccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh
Confidence 9999999633110 0 124679999999998 5
Q ss_pred cccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhccc-ccccccccccH-hHHHHHHHhhccCchhhcC
Q psy6542 199 KLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQ-IEEVSQDLITV-KGEQCVQLKLTRDTRIVLT 268 (334)
Q Consensus 199 ~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~-~~~~~i~~~~~~~p~~r~~ 268 (334)
..+|....||| ++||||. |.+||++++....+..|..-. ....|.+.... .+.+.|...+. ||..|++
T Consensus 362 ~kgY~~~cDwWSLG~ImyEmLv-GyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 362 GKGYGKECDWWSLGCIMYEMLV-GYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred cCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 77899999999 5666655 567999998777666554432 23333333322 44455555544 8999988
No 21
>KOG0578|consensus
Probab=100.00 E-value=1e-33 Score=266.96 Aligned_cols=181 Identities=14% Similarity=0.157 Sum_probs=150.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+.++-||.|....+++.||||.+....... +.-+.+|+.+|+..+|+|| |++++.|--.+.+|+||||+
T Consensus 283 qgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~Ni--------Vnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 283 QGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNI--------VNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred cccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHH--------HHHHHHhcccceeEEEEeec
Confidence 4678899999999999999999999777643 3456789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|| +..+.... ...+.++..++.+++.||+|||.++ |+|||||.+|||++.+|.+||+
T Consensus 353 ~ggsLTDvVt~~-----~~~E~qIA~Icre~l~aL~fLH~~g----------------IiHrDIKSDnILL~~~g~vKlt 411 (550)
T KOG0578|consen 353 EGGSLTDVVTKT-----RMTEGQIAAICREILQGLKFLHARG----------------IIHRDIKSDNILLTMDGSVKLT 411 (550)
T ss_pred CCCchhhhhhcc-----cccHHHHHHHHHHHHHHHHHHHhcc----------------eeeeccccceeEeccCCcEEEe
Confidence 999 43332221 1256667788889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccc--cccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIK--KLGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~--~~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+|..+.... ..+..|||+||+||+. ..+++..|+|+ +++||.-++ +||..
T Consensus 412 DFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE-PPYln 471 (550)
T KOG0578|consen 412 DFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE-PPYLN 471 (550)
T ss_pred eeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC-CCccC
Confidence 999999887665 4667899999999983 45677888888 666765554 45543
No 22
>KOG0585|consensus
Probab=100.00 E-value=4.5e-33 Score=257.31 Aligned_cols=231 Identities=18% Similarity=0.199 Sum_probs=173.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc--------chHH----hhhHHHHHHHHHhcCCCCcccccccceeeEEEEee
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH--------ESRV----AKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS 79 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~--------~~~~----~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~ 79 (334)
.++-++|.+|++..+++.||||++.+... .... .+...+|+.||++|+|||| |+++.+..
T Consensus 107 ~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV--------V~LiEvLD 178 (576)
T KOG0585|consen 107 SGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV--------VKLIEVLD 178 (576)
T ss_pred CCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe--------eEEEEeec
Confidence 35566999999999999999999987643 1111 1367889999999999999 99999998
Q ss_pred cC--CeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCC
Q psy6542 80 EP--NSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPA 157 (334)
Q Consensus 80 ~~--~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~ 157 (334)
+. +.+|||+|||..|.-......... +...++..++..++.||+|||.++ ||||||||+
T Consensus 179 DP~s~~~YlVley~s~G~v~w~p~d~~e---ls~~~Ar~ylrDvv~GLEYLH~Qg----------------iiHRDIKPs 239 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGEVKWCPPDKPE---LSEQQARKYLRDVVLGLEYLHYQG----------------IIHRDIKPS 239 (576)
T ss_pred CcccCceEEEEEeccCCccccCCCCccc---ccHHHHHHHHHHHHHHHHHHHhcC----------------eeccccchh
Confidence 65 579999999998831121222111 345555666779999999999999 999999999
Q ss_pred ceeeCCCCCEEEEecccccccCCCC-------CCccccCcccccccccccc------CCcceeeh--hHHHHHcCCCCCC
Q psy6542 158 NILLDEHGHVRISDLGLACDFSKKK-------PHASVESDCILHGYIKKLG------GPFVSAWQ--TRYAKLFPNRLEL 222 (334)
Q Consensus 158 NiLl~~~~~vkl~DFGla~~~~~~~-------~~~~~~t~~~~~~~v~~~~------~~~~~~w~--~~~~~l~~~~~~~ 222 (334)
|+|++++|+|||+|||.+..+..+. -....|||.+++||+...+ +...|+|+ +..++|..+.+||
T Consensus 240 NLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 240 NLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred heEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 9999999999999999998773332 2346899999999984332 23456666 4445556677899
Q ss_pred CCCCCCCcccchhccccccccccc-ccHhHHHHHHHhhccCchhhcCCC
Q psy6542 223 HPESGQSKPELIFMDQIEEVSQDL-ITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 223 ~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.++.....++.|....+. ++..- .-...++.|...+.+||..|++-+
T Consensus 320 ~~~~~~~l~~KIvn~pL~-fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~ 367 (576)
T KOG0585|consen 320 FDDFELELFDKIVNDPLE-FPENPEINEDLKDLIKRLLEKDPEQRITLP 367 (576)
T ss_pred ccchHHHHHHHHhcCccc-CCCcccccHHHHHHHHHHhhcChhheeehh
Confidence 999887788877777553 22111 111567788888899999999865
No 23
>KOG0661|consensus
Probab=100.00 E-value=1.2e-33 Score=261.37 Aligned_cols=262 Identities=15% Similarity=0.120 Sum_probs=185.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCC-eEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPN-SHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~-~~~ivmE 89 (334)
-|..+-||+|..+++|..||||.+++........ --.+|+..|++|+ |||| |++++++.+++ .+|+|||
T Consensus 20 DGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpni--------ikL~Evi~d~~~~L~fVfE 90 (538)
T KOG0661|consen 20 DGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNI--------IKLKEVIRDNDRILYFVFE 90 (538)
T ss_pred CCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcc--------hhhHHHhhccCceEeeeHH
Confidence 3678899999999999999999999877643333 3356999999999 9999 99999999888 8999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
||+.++-.+.+.+.+.+ .+..+..|++||+.||.|+|.+| +.|||+||+|||+.....+||
T Consensus 91 ~Md~NLYqLmK~R~r~f---se~~irnim~QilqGL~hiHk~G----------------fFHRDlKPENiLi~~~~~iKi 151 (538)
T KOG0661|consen 91 FMDCNLYQLMKDRNRLF---SESDIRNIMYQILQGLAHIHKHG----------------FFHRDLKPENILISGNDVIKI 151 (538)
T ss_pred hhhhhHHHHHhhcCCcC---CHHHHHHHHHHHHHHHHHHHhcC----------------cccccCChhheEecccceeEe
Confidence 99999777766665555 55566778889999999999999 999999999999998889999
Q ss_pred EecccccccCCCCCCc-cccCccccccccc--cccCC-cceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 170 SDLGLACDFSKKKPHA-SVESDCILHGYIK--KLGGP-FVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~-~~~t~~~~~~~v~--~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
+||||||...+..+.+ +..|-+|-+||++ ...|+ +.|+|. |+.+.++.-++-|-|.+. .-++.-.-++.+-|
T Consensus 152 aDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE--~Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 152 ADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE--IDQIYKICEVLGTP 229 (538)
T ss_pred cccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH--HHHHHHHHHHhCCC
Confidence 9999999988887654 6678999999984 33455 455555 666666777777777763 33333222333333
Q ss_pred cccccHhHHHHHHHhhc-cCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHH
Q psy6542 244 QDLITVKGEQCVQLKLT-RDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGS 306 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~-~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~ 306 (334)
..-....+ .-+...|. +=|......--..++..++ +...++..+..-+|..|+ |.+.|++
T Consensus 230 ~~~~~~eg-~~La~~mnf~~P~~~~~~l~~L~p~~s~--~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 230 DKDSWPEG-YNLASAMNFRFPQVKPSPLKDLLPNASS--EAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccccchhH-HHHHHHhccCCCcCCCCChHHhCcccCH--HHHHHHHHHhcCCCccCccHHHHhcC
Confidence 22221122 12222221 1111111111002222222 334477777788888888 7777763
No 24
>KOG0660|consensus
Probab=100.00 E-value=3.4e-33 Score=251.16 Aligned_cols=195 Identities=21% Similarity=0.175 Sum_probs=156.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-----CCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-----PNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-----~~~~~i 86 (334)
+|..+-|..|.++.||+.||||.+..........++..+|+.+|+.++|+|| +.+++++.. -+.+|+
T Consensus 32 ~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNI--------i~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 32 RGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENI--------IGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred CcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCc--------ceEEeecccccccccceeEE
Confidence 4667799999999999999999999777777788899999999999999999 999999875 356999
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|+|+|+.++..+.+... .+.+ .-+..+++|++.||.|+|+.+ |+||||||+|+|++.++.
T Consensus 104 V~elMetDL~~iik~~~-~L~d---~H~q~f~YQiLrgLKyiHSAn----------------ViHRDLKPsNll~n~~c~ 163 (359)
T KOG0660|consen 104 VFELMETDLHQIIKSQQ-DLTD---DHAQYFLYQILRGLKYIHSAN----------------VIHRDLKPSNLLLNADCD 163 (359)
T ss_pred ehhHHhhHHHHHHHcCc-cccH---HHHHHHHHHHHHhcchhhccc----------------ccccccchhheeeccCCC
Confidence 99999988877766541 2333 333344579999999999999 999999999999999999
Q ss_pred EEEEecccccccCCC----CCCccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccch
Q psy6542 167 VRISDLGLACDFSKK----KPHASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELI 234 (334)
Q Consensus 167 vkl~DFGla~~~~~~----~~~~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i 234 (334)
+||+|||||+..... ....+..|-+|-+||+. ..++...|+|| |+++.|.++++-|.|.+.....+++
T Consensus 164 lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI 240 (359)
T KOG0660|consen 164 LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI 240 (359)
T ss_pred EEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 999999999988642 22345668899999983 33345566677 8888888889888888754434333
No 25
>KOG0033|consensus
Probab=100.00 E-value=1.2e-33 Score=241.90 Aligned_cols=223 Identities=21% Similarity=0.245 Sum_probs=176.0
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC--
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-- 94 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-- 94 (334)
-|+.+.++.||+.+|+|++..........+.+.+|++|.+.|+|||| |++.+.+.+....|||+|++.|+
T Consensus 26 vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~I--------vrL~~ti~~~~~~ylvFe~m~G~dl 97 (355)
T KOG0033|consen 26 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI--------VRLHDSIQEESFHYLVFDLVTGGEL 97 (355)
T ss_pred HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcE--------eehhhhhcccceeEEEEecccchHH
Confidence 57889999999999999999877755566788899999999999999 99999999999999999999999
Q ss_pred -hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC---CCEEEE
Q psy6542 95 -KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH---GHVRIS 170 (334)
Q Consensus 95 -l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~---~~vkl~ 170 (334)
.+.+.+ .-+++....-+++ ||+.+|.|+|+++ |+|||+||+|+|+.+. .-|||+
T Consensus 98 ~~eIV~R---~~ySEa~aSH~~r---QiLeal~yCH~n~----------------IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 98 FEDIVAR---EFYSEADASHCIQ---QILEALAYCHSNG----------------IVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred HHHHHHH---HHHHHHHHHHHHH---HHHHHHHHHHhcC----------------ceeccCChhheeeeeccCCCceeec
Confidence 333322 3455555555555 9999999999999 9999999999999654 449999
Q ss_pred ecccccccCCCCC-CccccCccccccccc-cccCC-cceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccccc
Q psy6542 171 DLGLACDFSKKKP-HASVESDCILHGYIK-KLGGP-FVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQD 245 (334)
Q Consensus 171 DFGla~~~~~~~~-~~~~~t~~~~~~~v~-~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (334)
|||+|..++.+.. ....|||.||+||+. +.+|. ++|+|+ ++.+.+..+.+||.+++....++.|....+. .+..
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd-~~~~ 234 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD-YPSP 234 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC-CCCc
Confidence 9999998885443 457889999999984 34455 555565 5556667788899998888888888777654 3333
Q ss_pred cccH---hHHHHHHHhhccCchhhcCCC
Q psy6542 246 LITV---KGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 246 ~~~~---~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.|+- ..++.+...+.-||.+|.+..
T Consensus 235 ~w~~is~~Ak~LvrrML~~dP~kRIta~ 262 (355)
T KOG0033|consen 235 EWDTVTPEAKSLIRRMLTVNPKKRITAD 262 (355)
T ss_pred ccCcCCHHHHHHHHHHhccChhhhccHH
Confidence 4433 455566666677999999865
No 26
>KOG0582|consensus
Probab=100.00 E-value=6.8e-32 Score=248.00 Aligned_cols=184 Identities=14% Similarity=0.144 Sum_probs=149.9
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCC
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSG 93 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g 93 (334)
-...||+|+++.+++.||||++....-... ...+++|++.|+.++|||| ++++..|..+..+|+||.||.+
T Consensus 38 ~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNI--------v~~~~sFvv~~~LWvVmpfMa~ 108 (516)
T KOG0582|consen 38 ASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNI--------VTYHCSFVVDSELWVVMPFMAG 108 (516)
T ss_pred ceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCc--------ceEEEEEEecceeEEeehhhcC
Confidence 346899999999999999999998776544 5578889999999999999 9999999999999999999999
Q ss_pred C--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 94 P--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 94 ~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
| ++.++..-...+ .+..+..++.+++.||.|||.+| .||||+|+.||||+++|.|||+|
T Consensus 109 GS~ldIik~~~~~Gl---~E~~Ia~iLre~LkaL~YLH~~G----------------~IHRdvKAgnILi~~dG~VkLad 169 (516)
T KOG0582|consen 109 GSLLDIIKTYYPDGL---EEASIATILREVLKALDYLHQNG----------------HIHRDVKAGNILIDSDGTVKLAD 169 (516)
T ss_pred CcHHHHHHHHccccc---cHHHHHHHHHHHHHHHHHHHhcC----------------ceecccccccEEEcCCCcEEEcC
Confidence 9 666655444444 44455566679999999999999 99999999999999999999999
Q ss_pred cccccccCCCC-----C-CccccCccccccccc---cccCCc-ceeeh--hHHHHHcCCCCCCCCC
Q psy6542 172 LGLACDFSKKK-----P-HASVESDCILHGYIK---KLGGPF-VSAWQ--TRYAKLFPNRLELHPE 225 (334)
Q Consensus 172 FGla~~~~~~~-----~-~~~~~t~~~~~~~v~---~~~~~~-~~~w~--~~~~~l~~~~~~~~~~ 225 (334)
||.+..+.... . .++.|+++||+||+. ..||.+ +|+|+ +....++.|..||+--
T Consensus 170 Fgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~ 235 (516)
T KOG0582|consen 170 FGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY 235 (516)
T ss_pred ceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC
Confidence 99987554432 1 456789999999993 455665 55555 5556667888887543
No 27
>KOG0197|consensus
Probab=100.00 E-value=3.5e-32 Score=255.54 Aligned_cols=229 Identities=19% Similarity=0.124 Sum_probs=174.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++-++.||.++... ...||||.++..... ...|.+|++||++|+|+|| |++|+++..++.+||||||+
T Consensus 216 ~G~FG~V~~g~~~~-~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~l--------V~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 216 SGQFGEVWLGKWNG-STKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKL--------VKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred CCccceEEEEEEcC-CCcccceEEeccccC---hhHHHHHHHHHHhCcccCe--------EEEEEEEecCCceEEEEEec
Confidence 45567888887766 558999999976552 2456689999999999999 99999999989999999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
..| ++++.......+ ....++.++.|||+|++||++++ +|||||...|||++++..+||
T Consensus 284 ~~GsLl~yLr~~~~~~l---~~~~Ll~~a~qIaeGM~YLes~~----------------~IHRDLAARNiLV~~~~~vKI 344 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLL---NLPQLLDFAAQIAEGMAYLESKN----------------YIHRDLAARNILVDEDLVVKI 344 (468)
T ss_pred ccCcHHHHhhhcCCCcc---chHHHHHHHHHHHHHHHHHHhCC----------------ccchhhhhhheeeccCceEEE
Confidence 888 666655333233 55667788889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCcccc---Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 170 SDLGLACDFSKKKPHASVE---SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~---t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
+|||||+...++......| ..-+++||... ..+.++|+|| +++|+++.++.|+.+.+..
T Consensus 345 sDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~------------- 411 (468)
T KOG0197|consen 345 SDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE------------- 411 (468)
T ss_pred cccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-------------
Confidence 9999999666665444433 46678999854 4478899999 8899999888876444311
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccchhHHHH
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKCSQELL 304 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~lL 304 (334)
-+...+. --.|+.+| +.+|+++.++|..||..+++ .||+.+.|
T Consensus 412 ------------ev~~~le--~GyRlp~P----~~CP~~vY~lM~~CW~~~P~--~RPtF~~L 454 (468)
T KOG0197|consen 412 ------------EVLELLE--RGYRLPRP----EGCPDEVYELMKSCWHEDPE--DRPTFETL 454 (468)
T ss_pred ------------HHHHHHh--ccCcCCCC----CCCCHHHHHHHHHHhhCCcc--cCCCHHHH
Confidence 1111111 12345555 78899999988889887654 44533333
No 28
>KOG0580|consensus
Probab=100.00 E-value=2.3e-33 Score=239.47 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=180.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
++.+++||+|+.++++..||+|++.+... .....+++.+|++|.+.|+|||| .++|++|.+...+|+++||
T Consensus 32 kgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpni--------lrlY~~fhd~~riyLilEy 103 (281)
T KOG0580|consen 32 KGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNI--------LRLYGYFHDSKRIYLILEY 103 (281)
T ss_pred CCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccH--------HhhhhheeccceeEEEEEe
Confidence 57788999999999999999999997765 44566788999999999999999 9999999999999999999
Q ss_pred cCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
...| +..+......++.+.... .++.|++.||.|+|.++ ||||||||+|+|++.+|.+|
T Consensus 104 a~~gel~k~L~~~~~~~f~e~~~a---~Yi~q~A~Al~y~h~k~----------------VIhRdiKpenlLlg~~~~lk 164 (281)
T KOG0580|consen 104 APRGELYKDLQEGRMKRFDEQRAA---TYIKQLANALLYCHLKR----------------VIHRDIKPENLLLGSAGELK 164 (281)
T ss_pred cCCchHHHHHHhcccccccccchh---HHHHHHHHHHHHhccCC----------------cccCCCCHHHhccCCCCCee
Confidence 9998 445554455566554444 44559999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCccccccccc-cccCCcc-eeeh--hHHHHHcCCCCCCCCCCCCCcccchhccccccccc
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIK-KLGGPFV-SAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQ 244 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~-~~~~~~~-~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (334)
++|||=+.........+.|||.-|.+||+- ..++... |.|+ ++-+.+..+.+||...+....+.-|...++. .|.
T Consensus 165 iAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~-~p~ 243 (281)
T KOG0580|consen 165 IADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLK-FPS 243 (281)
T ss_pred ccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcccc-CCc
Confidence 999999988888888899999999999983 4555554 4555 3334445567788888866666666655554 332
Q ss_pred ccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 245 DLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 245 ~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..+ ....+.|...+..+|..|+.-.
T Consensus 244 ~is-~~a~dlI~~ll~~~p~~r~~l~ 268 (281)
T KOG0580|consen 244 TIS-GGAADLISRLLVKNPIERLALT 268 (281)
T ss_pred ccC-hhHHHHHHHHhccCccccccHH
Confidence 222 2445566666677777776533
No 29
>KOG0594|consensus
Probab=99.98 E-value=2.8e-31 Score=239.03 Aligned_cols=192 Identities=20% Similarity=0.172 Sum_probs=150.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCC-cccccccceeeEEEEeecCC------eE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEP-FKKCVLLFKMNLYKVTSEPN------SH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~-i~~~~~~~~v~~~~~~~~~~------~~ 84 (334)
++.-..||+|+++.+|+.||+|.++....+...-....+|+.+++.|+|+| | |.+++++.+.+ .+
T Consensus 21 eGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~i--------v~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 21 EGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHI--------VRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred CCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcce--------EEEEeeeeecccccccceE
Confidence 356679999999999999999999988764445555677999999999999 9 99999999877 89
Q ss_pred EEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 85 YIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
++|+||++-++..............+...+..++.||+.||+|||+++ |+||||||+|||++++
T Consensus 93 ~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~----------------IlHRDLKPQNlLi~~~ 156 (323)
T KOG0594|consen 93 YLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG----------------ILHRDLKPQNLLISSS 156 (323)
T ss_pred EEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC----------------eecccCCcceEEECCC
Confidence 999999999943322221110011133455667779999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCC-C-CccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKK-P-HASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~-~-~~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
|.+||+|||+|+.+.-.. . ..-.+|-+|-|||++ ..+.+..|+|+ |++..|+.+.+-|.|.++
T Consensus 157 G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se 226 (323)
T KOG0594|consen 157 GVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE 226 (323)
T ss_pred CcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence 999999999999776333 2 234568899999984 24456777777 888777888877777764
No 30
>KOG0192|consensus
Probab=99.98 E-value=1.4e-31 Score=250.41 Aligned_cols=188 Identities=17% Similarity=0.169 Sum_probs=149.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-eEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN-SHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~-~~~ivmEy 90 (334)
+++...||++....+- .||||++..........+.|.+|+.+|.+++|||| |++++++.++. .++|||||
T Consensus 51 ~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI--------V~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 51 SGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNI--------VQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred cCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCe--------eeEEEEEcCCCCceEEEEEe
Confidence 5777899988766532 39999999876644447789999999999999999 99999999887 79999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~vk 168 (334)
+++| +..+.... ..........+.|+.||+.||+|||+++ | ||||||||+|||++.++ ++|
T Consensus 122 ~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~--------------~-iIHrDLK~~NiLv~~~~~~~K 184 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEG--------------P-IIHRDLKSDNILVDLKGKTLK 184 (362)
T ss_pred CCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCC--------------C-eeecccChhhEEEcCCCCEEE
Confidence 9999 55544432 1233366777889999999999999998 3 89999999999999998 999
Q ss_pred EEecccccccCCC--CCCccccCccccccccccc----cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKKL----GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~~----~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||+++..... ......||+.||+||+... +..++|++| ++||++++.. ||....
T Consensus 185 I~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~-Pf~~~~ 250 (362)
T KOG0192|consen 185 IADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI-PFEDLA 250 (362)
T ss_pred ECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC-CCCCCC
Confidence 9999999977764 2333678999999999663 345677777 7778766554 654443
No 31
>KOG0032|consensus
Probab=99.98 E-value=1.7e-31 Score=251.81 Aligned_cols=228 Identities=21% Similarity=0.197 Sum_probs=183.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
++.+..||.|.++.||+.+|+|.+.+... .......+.+|++||+++. |||| |+++++|++.+.+|+|||
T Consensus 45 ~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpni--------v~l~~~~e~~~~~~lvmE 116 (382)
T KOG0032|consen 45 RGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNI--------VQLKDAFEDPDSVYLVME 116 (382)
T ss_pred CCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCE--------EEEEEEEEcCCeEEEEEE
Confidence 67788999999999999999999998776 2223456788999999999 9999 999999999999999999
Q ss_pred ccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC---
Q psy6542 90 RQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH--- 164 (334)
Q Consensus 90 y~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~--- 164 (334)
+|.|| +|.+... .+++ .....++.|++.++.|||+.+ |+||||||+|+|+...
T Consensus 117 L~~GGeLfd~i~~~---~~sE---~da~~~~~~il~av~~lH~~g----------------vvHrDlKpEN~L~~~~~~~ 174 (382)
T KOG0032|consen 117 LCEGGELFDRIVKK---HYSE---RDAAGIIRQILEAVKYLHSLG----------------VVHRDLKPENLLLASKDEG 174 (382)
T ss_pred ecCCchHHHHHHHc---cCCH---HHHHHHHHHHHHHHHHHHhCC----------------ceeccCCHHHeeeccccCC
Confidence 99999 5666444 2544 444555669999999999999 9999999999999654
Q ss_pred -CCEEEEecccccccCCC-CCCccccCcccccccccc-cc-CCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 165 -GHVRISDLGLACDFSKK-KPHASVESDCILHGYIKK-LG-GPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 165 -~~vkl~DFGla~~~~~~-~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
+.+|++|||++...... .....+||+.|++||+.. .+ +...|+|+ ++.+.|.++.+||.+.+.......+....
T Consensus 175 ~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~ 254 (382)
T KOG0032|consen 175 SGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD 254 (382)
T ss_pred CCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC
Confidence 47999999999988774 356789999999999965 44 55677777 55566677888999998776666665555
Q ss_pred ccccccccccH---hHHHHHHHhhccCchhhcCCC
Q psy6542 239 IEEVSQDLITV---KGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 239 ~~~~~~~~~~~---~~~~~i~~~~~~~p~~r~~~~ 270 (334)
+ .+....|+. ...+.+...+..||..|++..
T Consensus 255 ~-~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~ 288 (382)
T KOG0032|consen 255 F-DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAA 288 (382)
T ss_pred C-CCCCCCccccCHHHHHHHHHhcccCcccCCCHH
Confidence 5 345555554 566678888888999998865
No 32
>KOG0198|consensus
Probab=99.97 E-value=8.6e-32 Score=245.44 Aligned_cols=183 Identities=22% Similarity=0.206 Sum_probs=143.7
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC--eEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN--SHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~--~~~ivm 88 (334)
-|++.+.||++.++++|..+|||.+....... .+.+.+|+++|++++|||| |++++...... .++|.|
T Consensus 26 G~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~I--------V~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 26 GRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNI--------VQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCE--------EeeCCccccccCeeeEeee
Confidence 36888999999999999999999998764322 5678899999999999999 99999755444 699999
Q ss_pred EccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CC
Q psy6542 89 VRQSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HG 165 (334)
Q Consensus 89 Ey~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~ 165 (334)
||+.|| + +.+..... .+++ ..+..+..||+.||.|||+++ |+||||||+|||++. ++
T Consensus 96 Ey~~~GsL~~~~~~~g~-~l~E---~~v~~ytr~iL~GL~ylHs~g----------------~vH~DiK~~NiLl~~~~~ 155 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG-KLPE---PLVRRYTRQILEGLAYLHSKG----------------IVHCDIKPANILLDPSNG 155 (313)
T ss_pred eccCCCcHHHHHHHcCC-CCCH---HHHHHHHHHHHHHHHHHHhCC----------------EeccCcccceEEEeCCCC
Confidence 999999 4 33433332 4444 444455569999999999999 999999999999999 79
Q ss_pred CEEEEecccccccCC-----CCCCccccCcccccccccccc-CC--cceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSK-----KKPHASVESDCILHGYIKKLG-GP--FVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~-----~~~~~~~~t~~~~~~~v~~~~-~~--~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.+||+|||++..... .......||+.||+||+...+ .. .+|+|+ ++.||+. +..||..
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T-g~~PW~~ 224 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT-GKPPWSE 224 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC-CCCcchh
Confidence 999999999987663 224457899999999997644 33 677788 4556544 4667643
No 33
>KOG0589|consensus
Probab=99.97 E-value=1.4e-31 Score=250.57 Aligned_cols=229 Identities=14% Similarity=0.074 Sum_probs=181.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe-EEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS-HYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~-~~ivmEy 90 (334)
+++++.+++++++..+..+++|.+.........+....+|+.++++++|||| |.+++.|..++. ++|||+|
T Consensus 14 ~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~i--------v~y~ds~~~~~~~l~Ivm~Y 85 (426)
T KOG0589|consen 14 RGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNI--------VEYKDSFEEDGQLLCIVMEY 85 (426)
T ss_pred ccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCe--------eeeccchhcCCceEEEEEee
Confidence 6788899999999999999999999988755566677889999999999999 999999998887 9999999
Q ss_pred cCCC-hhHHhh-hhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISR-SKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~-~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+|| +..++. .+...+ .++.+..|+.|++.|+.|||++. |+|||||++||++++++.||
T Consensus 86 ~eGg~l~~~i~~~k~~~f---~E~~i~~~~~Q~~~av~ylH~~~----------------iLHRDlK~~Nifltk~~~Vk 146 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLF---PEERILKWFVQILLAVNYLHENR----------------VLHRDLKCANIFLTKDKKVK 146 (426)
T ss_pred cCCCCHHHHHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhhh----------------hhcccchhhhhhccccCcee
Confidence 9999 444434 332333 66778899999999999999988 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCccccccccc-cccCC-cceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIK-KLGGP-FVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~-~~~~~-~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+|+.+.... ..+..||+.||.||+. +..|. ++|+|+ |+||+ +....+|.+.+....-..+......+
T Consensus 147 LgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm-~~lk~aF~a~~m~~Li~ki~~~~~~P 225 (426)
T KOG0589|consen 147 LGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEM-CTLKPAFKASNMSELILKINRGLYSP 225 (426)
T ss_pred ecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHH-HhcccccCccchHHHHHHHhhccCCC
Confidence 99999999988874 5667899999999984 45555 566666 66666 44555788887665555566666666
Q ss_pred cccccccHhHHHH-HHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQC-VQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~-i~~~~~~~p~~r~~~~ 270 (334)
.+..++ .+... +...+..+|..|++..
T Consensus 226 lp~~ys--~el~~lv~~~l~~~P~~RPsa~ 253 (426)
T KOG0589|consen 226 LPSMYS--SELRSLVKSMLRKNPEHRPSAL 253 (426)
T ss_pred CCcccc--HHHHHHHHHHhhcCCccCCCHH
Confidence 665555 23333 3334455666666543
No 34
>KOG0201|consensus
Probab=99.97 E-value=6.4e-32 Score=247.83 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=171.0
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
-|++++.||+|.+..|++.||||++.....++.. ..+++|+.++..++++|| .++|+.|..+..+||+|||
T Consensus 22 grGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deI-ediqqei~~Ls~~~~~~i--------t~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 22 GRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEI-EDIQQEISVLSQCDSPNI--------TEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccceeeeeeeccccceEEEEEechhhcchhh-HHHHHHHHHHHhcCcchH--------HhhhhheeecccHHHHHHH
Confidence 4899999999999999999999999987765433 367789999999999999 9999999999999999999
Q ss_pred cCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|.|| ++.+..... + .+..+..++.+++.||.|||.++ .+|||||++|||+..+|.||
T Consensus 93 ~~gGsv~~lL~~~~~--~---~E~~i~~ilre~l~~l~ylH~~~----------------kiHrDIKaanil~s~~g~vk 151 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI--L---DEFEIAVILREVLKGLDYLHSEK----------------KIHRDIKAANILLSESGDVK 151 (467)
T ss_pred hcCcchhhhhccCCC--C---ccceeeeehHHHHHHhhhhhhcc----------------eecccccccceeEeccCcEE
Confidence 9999 555433332 1 33344455679999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||.+..+.... ..++.||+++|+|||.. .+| .++|+|+ +++|+ +.+.+|+.........- ++.....+
T Consensus 152 l~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl-a~GePP~s~~hPmrvlf-lIpk~~PP 229 (467)
T KOG0201|consen 152 LADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL-AKGEPPHSKLHPMRVLF-LIPKSAPP 229 (467)
T ss_pred EEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHH-hcCCCCCcccCcceEEE-eccCCCCC
Confidence 99999998776654 46789999999999843 344 5677777 55555 55666765554322222 22222222
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.-.+.+...-+.++..++.++|..|.++.
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~ 258 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAK 258 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHH
Confidence 22222221245667777777777777755
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=1.3e-30 Score=242.70 Aligned_cols=227 Identities=17% Similarity=0.156 Sum_probs=165.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+|+.||||++++... .......+.+|+++++.++|||| +++++++..++.+|+||||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i--------~~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 5 KGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL--------TALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC--------CCEEEEEEcCCEEEEEEeC
Confidence 47788999999999999999999986543 22234467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +...... ...+ ....+..++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 77 ~~~~~L~~~l~~-~~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------ivHrDlkp~NIll~~~~~~kl 136 (323)
T cd05571 77 ANGGELFFHLSR-ERVF---SEDRARFYGAEIVSALGYLHSCD----------------VVYRDLKLENLMLDKDGHIKI 136 (323)
T ss_pred CCCCcHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEeCCCCHHHEEECCCCCEEE
Confidence 9998 4222222 1223 34445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||+++...... ....+||+.|++||+.. .. +..+|+|+ ++|++ .++..||.+.+.......+..... ..
T Consensus 137 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el-ltg~~Pf~~~~~~~~~~~~~~~~~-~~ 214 (323)
T cd05571 137 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM-MCGRLPFYNQDHEKLFELILMEEI-RF 214 (323)
T ss_pred eeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhh-hcCCCCCCCCCHHHHHHHHHcCCC-CC
Confidence 9999998543222 33457899999999853 33 44566666 55555 556778876554333333333322 22
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
+..+. ......+...+..||..|++.
T Consensus 215 p~~~~-~~~~~li~~~L~~dP~~R~~~ 240 (323)
T cd05571 215 PRTLS-PEAKSLLAGLLKKDPKQRLGG 240 (323)
T ss_pred CCCCC-HHHHHHHHHHccCCHHHcCCC
Confidence 22222 245567777778899999853
No 36
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=1.6e-30 Score=242.71 Aligned_cols=228 Identities=17% Similarity=0.158 Sum_probs=165.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+|+.||||++.+... .......+.+|+++++.++|||| +++++++..++.+|+||||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i--------v~~~~~~~~~~~~~lv~Ey 76 (328)
T cd05593 5 KGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL--------TSLKYSFQTKDRLCFVMEY 76 (328)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC--------cceEEEEEcCCEEEEEEeC
Confidence 47888999999999999999999986543 23334567789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +...... ...+ ....+..++.||+.||.|||+++ |+||||||+|||++.++.+||
T Consensus 77 ~~~g~L~~~l~~-~~~l---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDikp~NIll~~~~~~kL 136 (328)
T cd05593 77 VNGGELFFHLSR-ERVF---SEDRTRFYGAEIVSALDYLHSGK----------------IVYRDLKLENLMLDKDGHIKI 136 (328)
T ss_pred CCCCCHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEecccCHHHeEECCCCcEEE
Confidence 9998 4222221 1223 44455667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||+++...... ....+||+.|++||+.. .. +..+|+|+ ++|++ ..+..||...+.....+.+..... ..
T Consensus 137 ~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el-ltG~~Pf~~~~~~~~~~~~~~~~~-~~ 214 (328)
T cd05593 137 TDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM-MCGRLPFYNQDHEKLFELILMEDI-KF 214 (328)
T ss_pred ecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHH-hhCCCCCCCCCHHHHHHHhccCCc-cC
Confidence 9999998643322 23456899999999853 23 45567777 55555 456678866543323333322222 12
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
+.... ......+...+..+|..|+++.
T Consensus 215 p~~~~-~~~~~li~~~L~~dP~~R~~~~ 241 (328)
T cd05593 215 PRTLS-ADAKSLLSGLLIKDPNKRLGGG 241 (328)
T ss_pred CCCCC-HHHHHHHHHHcCCCHHHcCCCC
Confidence 22222 2345566777788999998643
No 37
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=2.2e-30 Score=241.79 Aligned_cols=226 Identities=20% Similarity=0.199 Sum_probs=164.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.++.+|+.||||++++... .....+.+.+|+++++.++|||| +++++++.+++.+|+||||
T Consensus 28 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i--------v~~~~~~~~~~~~~lv~e~ 99 (329)
T PTZ00263 28 TGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI--------VNMMCSFQDENRVYFLLEF 99 (329)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC--------CcEEEEEEcCCEEEEEEcC
Confidence 46778999999999999999999986533 22234567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||+++++.+||
T Consensus 100 ~~~~~L~~~l~~~-~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivH~dlkp~NIll~~~~~~kl 159 (329)
T PTZ00263 100 VVGGELFTHLRKA-GRF---PNDVAKFYHAELVLAFEYLHSKD----------------IIYRDLKPENLLLDNKGHVKV 159 (329)
T ss_pred CCCChHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCCHHHEEECCCCCEEE
Confidence 9988 33222221 223 33444566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccccc
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQ 244 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (334)
+|||+++..... .....|++.|++||+.. ..+ ..+|+|+ ++|++ ..+..||.+.+.....+.+..... ..+.
T Consensus 160 ~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el-ltg~~pf~~~~~~~~~~~i~~~~~-~~p~ 236 (329)
T PTZ00263 160 TDFGFAKKVPDR-TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF-IAGYPPFFDDTPFRIYEKILAGRL-KFPN 236 (329)
T ss_pred eeccCceEcCCC-cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH-HcCCCCCCCCCHHHHHHHHhcCCc-CCCC
Confidence 999999876543 33457899999999843 333 4566666 55555 556778866553322232222221 1221
Q ss_pred ccccHhHHHHHHHhhccCchhhcCC
Q psy6542 245 DLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 245 ~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
. .+......+...+..||..|++.
T Consensus 237 ~-~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 237 W-FDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred C-CCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 12234556667777899999875
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=3e-30 Score=238.98 Aligned_cols=227 Identities=17% Similarity=0.160 Sum_probs=164.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.+..+++.||||++++... .......+.+|+.+++.++|||| +++++++.+++.+|+||||
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 3 KGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFI--------VPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcE--------eceeeEEecCCeEEEEEcC
Confidence 57788999999999999999999986432 23334567789999999999999 9999999999999999999
Q ss_pred cCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|+ + +.+... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 75 ~~~g~L~~~l~~~--~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------i~HrDlkp~Nili~~~~~~k 133 (312)
T cd05585 75 INGGELFHHLQRE--GRF---DLSRARFYTAELLCALENLHKFN----------------VIYRDLKPENILLDYQGHIA 133 (312)
T ss_pred CCCCcHHHHHHhc--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEeCCCCHHHeEECCCCcEE
Confidence 9998 4 333222 233 33444566779999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
|+|||+++...... ....+||+.|++||+.. .. ...+|+|+ ++.+.+..+..||.+.+.....+.+..... ..
T Consensus 134 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-~~ 212 (312)
T cd05585 134 LCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-RF 212 (312)
T ss_pred EEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-CC
Confidence 99999998543322 33457899999999843 23 44567777 444444566778876553322222222211 12
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
+... +......+..++..||..|++.
T Consensus 213 ~~~~-~~~~~~li~~~L~~dp~~R~~~ 238 (312)
T cd05585 213 PDGF-DRDAKDLLIGLLSRDPTRRLGY 238 (312)
T ss_pred CCcC-CHHHHHHHHHHcCCCHHHcCCC
Confidence 2122 2244566777778899999864
No 39
>KOG0586|consensus
Probab=99.97 E-value=2.1e-30 Score=246.67 Aligned_cols=228 Identities=19% Similarity=0.214 Sum_probs=179.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+.+..|.+|.+..||..||||++.+...+....+.+.+|+++|+.++|||| |++|.+..+...+|+||||+
T Consensus 66 ~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnI--------vkl~~v~~t~~~lylV~eya 137 (596)
T KOG0586|consen 66 KGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNI--------VKLFSVIETEATLYLVMEYA 137 (596)
T ss_pred cceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcce--------eeeeeeeeecceeEEEEEec
Confidence 3566799999999999999999999999866666668999999999999999 99999999999999999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.|| .+++..+. +..+ .....++.|+++|++|||+++ |+|||||++||||+.+..+||
T Consensus 138 ~~ge~~~yl~~~g--r~~e---~~ar~~F~q~vsaveYcH~k~----------------ivHrdLk~eNilL~~~mnikI 196 (596)
T KOG0586|consen 138 SGGELFDYLVKHG--RMKE---KEARAKFRQIVSAVEYCHSKN----------------IVHRDLKAENILLDENMNIKI 196 (596)
T ss_pred cCchhHHHHHhcc--cchh---hhhhhhhHHHHHHHHHHhhcc----------------eeccccchhhcccccccceee
Confidence 999 56665543 2222 333445569999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-CCccccCcccccccc---ccccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 170 SDLGLACDFSKKK-PHASVESDCILHGYI---KKLGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 170 ~DFGla~~~~~~~-~~~~~~t~~~~~~~v---~~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
+|||++..+.... ..+.||++.|.+||+ ..+.++..|.|+ .+.+.+..+.+||.|...-.+.+-.+.+.+. ++
T Consensus 197 aDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r-Ip 275 (596)
T KOG0586|consen 197 ADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR-IP 275 (596)
T ss_pred eccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec-cc
Confidence 9999999887654 467899999999998 345577888888 5555567889999988866555544444332 33
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
-.+.. ...+.+...+..+|..|.++.
T Consensus 276 ~~ms~-dce~lLrk~lvl~Pskr~~~d 301 (596)
T KOG0586|consen 276 FYMSC-DCEDLLRKFLVLNPSKRGPCD 301 (596)
T ss_pred ceeec-hhHHHHHHhhccCccccCCHH
Confidence 22221 233445555567888887776
No 40
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=2.3e-30 Score=244.89 Aligned_cols=187 Identities=18% Similarity=0.210 Sum_probs=145.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||+|.++.+|+.||||++++... +......+.+|+.+++.++|+|| +++++.+.+++.+|+||||
T Consensus 11 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~i--------v~~~~~~~~~~~~~lv~E~ 82 (363)
T cd05628 11 RGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWV--------VKMFYSFQDKLNLYLIMEF 82 (363)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCc--------ceEEEEEecCCeEEEEEcC
Confidence 57788999999999999999999986543 33344567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... ..+ ....+..++.|++.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~gg~L~~~l~~~-~~l---~~~~~~~~~~qi~~aL~~lH~~g----------------ivHrDlKp~NILi~~~~~vkL 142 (363)
T cd05628 83 LPGGDMMTLLMKK-DTL---TEEETQFYIAETVLAIDSIHQLG----------------FIHRDIKPDNLLLDSKGHVKL 142 (363)
T ss_pred CCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEecCCCHHHeEECCCCCEEE
Confidence 9988 43332222 233 34445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-------------------------------------CCccccCccccccccc-cccCC-cceeeh-
Q psy6542 170 SDLGLACDFSKKK-------------------------------------PHASVESDCILHGYIK-KLGGP-FVSAWQ- 209 (334)
Q Consensus 170 ~DFGla~~~~~~~-------------------------------------~~~~~~t~~~~~~~v~-~~~~~-~~~~w~- 209 (334)
+|||+|+...... ....+||+.|++||+. ..+++ .+|+|+
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSl 222 (363)
T cd05628 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (363)
T ss_pred eeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhh
Confidence 9999997543211 1234789999999984 33344 455555
Q ss_pred --hHHHHHcCCCCCCCCCCC
Q psy6542 210 --TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 210 --~~~~~l~~~~~~~~~~~~ 227 (334)
++|++ ..+.+||.+.+.
T Consensus 223 Gvil~el-l~G~~Pf~~~~~ 241 (363)
T cd05628 223 GVIMYEM-LIGYPPFCSETP 241 (363)
T ss_pred HHHHHHH-HhCCCCCCCCCH
Confidence 55555 456778876653
No 41
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=3.3e-30 Score=239.97 Aligned_cols=227 Identities=17% Similarity=0.164 Sum_probs=165.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||++.++.+|+.||+|+++.... .......+.+|+++++.++|||| +++++++..++.+|+||||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i--------~~~~~~~~~~~~~~lv~E~ 76 (323)
T cd05595 5 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL--------TALKYAFQTHDRLCFVMEY 76 (323)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC--------cceeeEEecCCEEEEEEeC
Confidence 47889999999999999999999986533 22234466789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +...... ...+ ....+..++.||+.||.|||+++ |+||||||+|||+++++.+||
T Consensus 77 ~~~~~L~~~l~~-~~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivH~Dlkp~NIll~~~~~~kL 136 (323)
T cd05595 77 ANGGELFFHLSR-ERVF---TEERARFYGAEIVSALEYLHSRD----------------VVYRDIKLENLMLDKDGHIKI 136 (323)
T ss_pred CCCCcHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHEEEcCCCCEEe
Confidence 9998 4322222 1223 44555667779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||+++...... .....|++.|++||+.. .. ...+|+|+ ++|+++ ++..||...+.......+..... ..
T Consensus 137 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~g~~Pf~~~~~~~~~~~~~~~~~-~~ 214 (323)
T cd05595 137 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHERLFELILMEEI-RF 214 (323)
T ss_pred cccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCC-CC
Confidence 9999998643322 23456899999999853 22 44567777 556655 46668766554333333322222 12
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
+..+. ......+..++..+|..|+..
T Consensus 215 p~~~~-~~~~~li~~~L~~dP~~R~~~ 240 (323)
T cd05595 215 PRTLS-PEAKSLLAGLLKKDPKQRLGG 240 (323)
T ss_pred CCCCC-HHHHHHHHHHccCCHHHhCCC
Confidence 22222 234567777778899999854
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=1.5e-29 Score=231.18 Aligned_cols=188 Identities=16% Similarity=0.157 Sum_probs=146.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.++.+|+.||||.+.+.... ......+.+|+++++.++|+|+ +++++++.+++.+|+||||
T Consensus 10 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i--------v~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 10 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFV--------VSLAYAYETKDALCLVLTI 81 (285)
T ss_pred cCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcE--------EEEEEEEccCCeEEEEEEe
Confidence 467889999999999999999999865432 2233456789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.|+ +...... ....+ .....+.++.|++.||.|||+++ |+||||||+|||+++++.+|
T Consensus 82 ~~~g~L~~~~~~~~~~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------iiH~dikp~Nill~~~~~~k 142 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGF---DEQRAIFYAAELCCGLEDLQRER----------------IVYRDLKPENILLDDRGHIR 142 (285)
T ss_pred cCCCcHHHHHHhhCCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EEeCCCCHHHEEECCCCCEE
Confidence 9988 4333222 11122 44555677789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC-CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP-HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 169 l~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
|+|||++........ ....|+..|++||+.. ..+..+|+|+ ++|++ ..+..||.+...
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el-~~g~~pf~~~~~ 206 (285)
T cd05631 143 ISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEM-IQGQSPFRKRKE 206 (285)
T ss_pred EeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHH-HhCCCCCCCCCc
Confidence 999999987654332 3456899999999853 2344567777 55555 457778876553
No 43
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=5.2e-30 Score=238.74 Aligned_cols=227 Identities=17% Similarity=0.159 Sum_probs=164.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.+..+|+.||+|++++... .......+..|+++++.++|||| +++++++..++.+|+||||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i--------~~~~~~~~~~~~~~lv~E~ 76 (325)
T cd05594 5 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL--------TALKYSFQTHDRLCFVMEY 76 (325)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC--------CceEEEEEcCCEEEEEEeC
Confidence 57788999999999999999999986533 22233456779999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|+ +...... ...+ ....+..++.||+.||.|||+ .+ |+||||||+|||+++++.+|
T Consensus 77 ~~~~~L~~~l~~-~~~l---~~~~~~~~~~qi~~aL~~lH~~~~----------------ivHrDikp~NIll~~~~~~k 136 (325)
T cd05594 77 ANGGELFFHLSR-ERVF---SEDRARFYGAEIVSALDYLHSEKN----------------VVYRDLKLENLMLDKDGHIK 136 (325)
T ss_pred CCCCcHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHhcCC----------------EEecCCCCCeEEECCCCCEE
Confidence 9998 4322221 1223 445556677899999999997 78 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... ......||+.|++||+.. . .+..+|+|+ ++|++ .++..||.+.+.....+.+..... .
T Consensus 137 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el-~tG~~Pf~~~~~~~~~~~i~~~~~-~ 214 (325)
T cd05594 137 ITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM-MCGRLPFYNQDHEKLFELILMEEI-R 214 (325)
T ss_pred EecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeee-ccCCCCCCCCCHHHHHHHHhcCCC-C
Confidence 9999999754322 223456899999999853 2 245667777 44554 556778866554333333322222 1
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
.+.... ......+...+..||..|+..
T Consensus 215 ~p~~~~-~~~~~li~~~L~~dP~~R~~~ 241 (325)
T cd05594 215 FPRTLS-PEAKSLLSGLLKKDPKQRLGG 241 (325)
T ss_pred CCCCCC-HHHHHHHHHHhhcCHHHhCCC
Confidence 222222 134556777778899999854
No 44
>KOG4717|consensus
Probab=99.97 E-value=2.2e-30 Score=241.39 Aligned_cols=228 Identities=19% Similarity=0.227 Sum_probs=183.9
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+-+--|.+|++--||..||||++.+.+.+....-++.+|++-|+.++|||| |++|.+..++..+|+|+|+-+
T Consensus 29 GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNi--------VRLYEViDTQTKlyLiLELGD 100 (864)
T KOG4717|consen 29 GHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNI--------VRLYEVIDTQTKLYLILELGD 100 (864)
T ss_pred CceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCe--------eeeeehhcccceEEEEEEecC
Confidence 344568899999999999999999999987777788999999999999999 999999999999999999999
Q ss_pred CC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CCCEEE
Q psy6542 93 GP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HGHVRI 169 (334)
Q Consensus 93 g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~~vkl 169 (334)
|| .|+|..+. ..+.+..++ .++.||+.|+.|||... ++||||||+|+.+-. -|.|||
T Consensus 101 ~GDl~DyImKHe-~Gl~E~La~---kYF~QI~~AI~YCHqLH----------------VVHRDLKPENVVFFEKlGlVKL 160 (864)
T KOG4717|consen 101 GGDLFDYIMKHE-EGLNEDLAK---KYFAQIVHAISYCHQLH----------------VVHRDLKPENVVFFEKLGLVKL 160 (864)
T ss_pred CchHHHHHHhhh-ccccHHHHH---HHHHHHHHHHHHHhhhh----------------hhcccCCcceeEEeeecCceEe
Confidence 97 67776665 345444444 44559999999999999 999999999998754 589999
Q ss_pred EecccccccCCCCC-CccccCcccccccccc---ccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKK---LGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~---~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
+|||++-.+..+.. .++||+..|.+||++. +..|..|+|+ ++.+|+.++++||.-.++.+....| +..-+++|
T Consensus 161 TDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI-mDCKYtvP 239 (864)
T KOG4717|consen 161 TDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI-MDCKYTVP 239 (864)
T ss_pred eeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh-hcccccCc
Confidence 99999998887764 6789999999999853 3466788888 7788889999999888776555544 34445566
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.-.+. ..++.|..++.+||+.|-+-+
T Consensus 240 shvS~-eCrdLI~sMLvRdPkkRAslE 265 (864)
T KOG4717|consen 240 SHVSK-ECRDLIQSMLVRDPKKRASLE 265 (864)
T ss_pred hhhhH-HHHHHHHHHHhcCchhhccHH
Confidence 44442 334456666789999987643
No 45
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=2.8e-30 Score=236.80 Aligned_cols=227 Identities=16% Similarity=0.204 Sum_probs=163.1
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.+++...||+|.++.+|+.||||++..... +....+.+.+|+++++.++|||| +++++++.+++.+|+|||
T Consensus 10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i--------v~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 10 GTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI--------IRLFWTEHDQRFLYMLME 81 (291)
T ss_pred ecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcH--------hhhHhhhccCCeEEEEEe
Confidence 357788999999999999999999986443 22334567889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||+++++.+|
T Consensus 82 ~~~~~~L~~~~~~~-~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 82 YVPGGELFSYLRNS-GRF---SNSTGLFYASEIVCALEYLHSKE----------------IVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred CCCCCCHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCCHHHeEECCCCCEE
Confidence 99988 43332221 123 34445567789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|+|||+++..... .....|++.|++||+.. .. ...+|+|+ ++|++ .++..||.+.+.....+.+..... ..+
T Consensus 142 l~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l-~~g~~pf~~~~~~~~~~~i~~~~~-~~~ 218 (291)
T cd05612 142 LTDFGFAKKLRDR-TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEM-LVGYPPFFDDNPFGIYEKILAGKL-EFP 218 (291)
T ss_pred EEecCcchhccCC-cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHhCCc-CCC
Confidence 9999999876543 33456899999999843 33 44566666 55555 556667766543222222222211 122
Q ss_pred cccccHhHHHHHHHhhccCchhhcCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
..+ +....+.+...+..||..|+++
T Consensus 219 ~~~-~~~~~~li~~~l~~dp~~R~~~ 243 (291)
T cd05612 219 RHL-DLYAKDLIKKLLVVDRTRRLGN 243 (291)
T ss_pred ccC-CHHHHHHHHHHcCCCHHHccCC
Confidence 122 1133456666667788888764
No 46
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=2.4e-30 Score=241.48 Aligned_cols=186 Identities=17% Similarity=0.153 Sum_probs=141.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-----CeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-----NSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-----~~~~i 86 (334)
+++...||+|.++.+|+.||||.+............+.+|+++++.++|||| +++++++... ..+|+
T Consensus 10 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni--------v~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 10 KGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI--------VEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCE--------eeecceEeccCCCCCceEEE
Confidence 5678899999999999999999998544333334467889999999999999 9999887633 35899
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||||+.+++....... ..+ .......++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 82 v~e~~~~~L~~~l~~~-~~~---~~~~~~~i~~qi~~aL~~LH~~~----------------ivH~dlkp~NIll~~~~~ 141 (338)
T cd07859 82 VFELMESDLHQVIKAN-DDL---TPEHHQFFLYQLLRALKYIHTAN----------------VFHRDLKPKNILANADCK 141 (338)
T ss_pred EEecCCCCHHHHHHhc-ccC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHeEECCCCc
Confidence 9999988754332321 122 44555667789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC-----CccccCcccccccccc----ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP-----HASVESDCILHGYIKK----LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~----~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+||+|||+++....... ....|++.|++||+.. ..+..+|+|+ ++|++ .++.+||.+.+
T Consensus 142 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el-~tg~~pf~~~~ 212 (338)
T cd07859 142 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV-LTGKPLFPGKN 212 (338)
T ss_pred EEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHH-HcCCCCCCCCC
Confidence 99999999986533221 2346889999999843 2344567777 55555 45677886654
No 47
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=9.8e-30 Score=242.10 Aligned_cols=186 Identities=18% Similarity=0.194 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||+|.++.+++.||||++.+... .......+.+|+++++.++|+|| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i--------v~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 11 IGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV--------VRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC--------CeEEEEEEeCCEEEEEEeC
Confidence 57888999999999999999999986433 23344577889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+|| +..+.... ..+ .+..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||
T Consensus 83 ~~gg~L~~~l~~~-~~~---~e~~~~~~~~qi~~al~~lH~~~----------------ivHrDlKp~NILl~~~g~~kL 142 (382)
T cd05625 83 IPGGDMMSLLIRM-GIF---PEDLARFYIAELTCAVESVHKMG----------------FIHRDIKPDNILIDRDGHIKL 142 (382)
T ss_pred CCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEECCCCCEEE
Confidence 9998 43332221 223 33444556679999999999999 999999999999999999999
Q ss_pred EecccccccCCC-------------------------------------------------CCCccccCccccccccc-c
Q psy6542 170 SDLGLACDFSKK-------------------------------------------------KPHASVESDCILHGYIK-K 199 (334)
Q Consensus 170 ~DFGla~~~~~~-------------------------------------------------~~~~~~~t~~~~~~~v~-~ 199 (334)
+|||+|+.+... .....+||+.|++||+. .
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (382)
T cd05625 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR 222 (382)
T ss_pred eECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC
Confidence 999998633110 01234689999999984 3
Q ss_pred ccC-Ccceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 200 LGG-PFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 200 ~~~-~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
..+ ..+|+|+ ++|+++ .+.+||.+.+
T Consensus 223 ~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~ 252 (382)
T cd05625 223 TGYTQLCDWWSVGVILYEML-VGQPPFLAQT 252 (382)
T ss_pred CCCCCeeeEEechHHHHHHH-hCCCCCCCCC
Confidence 334 4555555 556655 5677887654
No 48
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=8.6e-30 Score=240.73 Aligned_cols=187 Identities=19% Similarity=0.227 Sum_probs=145.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.++.+|+.||||+++.... .......+.+|+++++.++|||| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i--------v~~~~~~~~~~~~~lv~E~ 82 (364)
T cd05599 11 RGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWV--------VKLYYSFQDENYLYLIMEY 82 (364)
T ss_pred ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC--------cceEEEEEcCCeEEEEECC
Confidence 46778999999999999999999986533 23344567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.... ..+ ....+..++.|++.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~~g~L~~~l~~~-~~l---~~~~~~~~~~qi~~aL~~lH~~~----------------ivH~Dlkp~NIl~~~~~~~kl 142 (364)
T cd05599 83 LPGGDMMTLLMKK-DTF---TEEETRFYIAETILAIDSIHKLG----------------YIHRDIKPDNLLLDAKGHIKL 142 (364)
T ss_pred CCCcHHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeccCCHHHeEECCCCCEEE
Confidence 9998 43332322 233 44445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC----------------------------------------CCccccCccccccccc-ccc-CCccee
Q psy6542 170 SDLGLACDFSKKK----------------------------------------PHASVESDCILHGYIK-KLG-GPFVSA 207 (334)
Q Consensus 170 ~DFGla~~~~~~~----------------------------------------~~~~~~t~~~~~~~v~-~~~-~~~~~~ 207 (334)
+|||++..+.... ....+||+.|++||+. ..+ +..+|+
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 222 (364)
T cd05599 143 SDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW 222 (364)
T ss_pred eecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeee
Confidence 9999997543221 1124689999999984 333 455667
Q ss_pred eh--hHHHHHcCCCCCCCCCC
Q psy6542 208 WQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 208 w~--~~~~~l~~~~~~~~~~~ 226 (334)
|+ ++.+.|..+.+||.+.+
T Consensus 223 wSlG~il~el~~G~~Pf~~~~ 243 (364)
T cd05599 223 WSLGVIMYEMLVGYPPFCSDN 243 (364)
T ss_pred ecchhHHHHhhcCCCCCCCCC
Confidence 77 44444456777887655
No 49
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=9.6e-30 Score=241.34 Aligned_cols=187 Identities=17% Similarity=0.156 Sum_probs=147.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+++.||+|++.+... .....+.+.+|+.+++.++|||| +++++++.+++.+|+||||
T Consensus 53 ~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i--------v~~~~~~~~~~~~~lv~Ey 124 (370)
T cd05621 53 RGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV--------VQLFCAFQDDKYLYMVMEY 124 (370)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE--------eeEEEEEEcCCEEEEEEcC
Confidence 57788999999999999999999976433 22234467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... .+ .......++.||+.||.|||+++ |+||||||+|||+++++.+||
T Consensus 125 ~~gg~L~~~l~~~--~~---~~~~~~~~~~qil~aL~~LH~~~----------------IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 125 MPGGDLVNLMSNY--DV---PEKWAKFYTAEVVLALDAIHSMG----------------LIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred CCCCcHHHHHHhc--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHEEECCCCCEEE
Confidence 9988 44333321 22 34445567779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC---CCccccCccccccccccc------cCCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK---PHASVESDCILHGYIKKL------GGPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 170 ~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~------~~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
+|||+|....... .....||+.|++||+... .+..+|+|+ ++|++ ..+.+||.+.+..
T Consensus 184 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel-l~G~~Pf~~~~~~ 253 (370)
T cd05621 184 ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM-LVGDTPFYADSLV 253 (370)
T ss_pred EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH-HhCCCCCCCCCHH
Confidence 9999998765432 235678999999998532 234667777 55565 4577788776643
No 50
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=4.4e-30 Score=235.06 Aligned_cols=187 Identities=16% Similarity=0.116 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+++.||+|.++...... ....+.+|+++++.++|||| +++++++.+.+.+|+||||+
T Consensus 15 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~lv~e~~ 85 (288)
T cd07871 15 EGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKNLKHANI--------VTLHDIIHTERCLTLVFEYL 85 (288)
T ss_pred cCCCEEEEEEEECCCCCEEEEEEecccccCC-cchhHHHHHHHHHhCCCCCE--------eeEEEEEcCCCeEEEEEeCC
Confidence 5677899999999999999999997654321 23356679999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
+|++........... ....+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 86 ~~~l~~~l~~~~~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivH~dlkp~Nil~~~~~~~kl~D 146 (288)
T cd07871 86 DSDLKQYLDNCGNLM---SMHNVKIFMFQLLRGLSYCHKRK----------------ILHRDLKPQNLLINEKGELKLAD 146 (288)
T ss_pred CcCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHEEECCCCCEEECc
Confidence 988533322221122 34455667779999999999999 99999999999999999999999
Q ss_pred cccccccCCCC--CCccccCcccccccccc--cc-CCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKK--PHASVESDCILHGYIKK--LG-GPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~-~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||+++...... .....+++.|++||+.. .. +..+|+|+ ++.+.+.++.+||.+.+
T Consensus 147 fG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 147 FGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred CcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99998654332 23346788999999743 22 44566666 44444455667876654
No 51
>KOG1989|consensus
Probab=99.97 E-value=1e-29 Score=250.76 Aligned_cols=189 Identities=14% Similarity=0.085 Sum_probs=152.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEee----cC---C
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTS----EP---N 82 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~----~~---~ 82 (334)
+.|++-.||+|.+...|..||+|.+-.. +....+...+|+++|++|+ |+|| |.++|... .+ -
T Consensus 46 AEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nI--------V~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 46 AEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNI--------VSYIDSSAINRSSNNGVW 115 (738)
T ss_pred ccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCce--------eeEeccccccccCCCcee
Confidence 4689999999999998899999998866 4445667889999999998 9999 99999322 11 3
Q ss_pred eEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 83 SHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 83 ~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
.++|.||||.|| .|++..+...++ .+..++.|++|+++|+.+||... |||||||||-||||
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~l---te~eVLkIf~dv~~AVa~mH~~~--------------pPiIHRDLKiENvL 178 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRL---TEDEVLKIFYDVCEAVAAMHYLK--------------PPIIHRDLKIENVL 178 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccC---ChHHHHHHHHHHHHHHHHHhcCC--------------CccchhhhhhhheE
Confidence 589999999965 677755443343 67888999999999999999987 88999999999999
Q ss_pred eCCCCCEEEEecccccccCCCC-----------CCccccCcccccccccccc-----CCcceeeh--hHHHHHcCCCCCC
Q psy6542 161 LDEHGHVRISDLGLACDFSKKK-----------PHASVESDCILHGYIKKLG-----GPFVSAWQ--TRYAKLFPNRLEL 222 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~~~~~~-----------~~~~~~t~~~~~~~v~~~~-----~~~~~~w~--~~~~~l~~~~~~~ 222 (334)
|+.+|+.||||||.|+...... .-...+|+.|-+|||.+.+ +.++|+|. |++|.|+...+||
T Consensus 179 ls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PF 258 (738)
T KOG1989|consen 179 LSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPF 258 (738)
T ss_pred EcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999998443222 1123568999999995433 55777777 8888888888898
Q ss_pred CCCC
Q psy6542 223 HPES 226 (334)
Q Consensus 223 ~~~~ 226 (334)
...+
T Consensus 259 e~sg 262 (738)
T KOG1989|consen 259 EESG 262 (738)
T ss_pred CcCc
Confidence 6543
No 52
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=1.5e-29 Score=235.25 Aligned_cols=228 Identities=15% Similarity=0.129 Sum_probs=164.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.+|+.||||++++... .......+..|.++++.+ +|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i--------~~~~~~~~~~~~~~lv~E 76 (321)
T cd05591 5 KGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFL--------TALHCCFQTKDRLFFVME 76 (321)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCc--------cceeeEEEcCCeEEEEEe
Confidence 57788999999999999999999986533 222334566788888865 79999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 77 ~~~~~~L~~~l~~~-~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDikp~Nill~~~~~~k 136 (321)
T cd05591 77 YVNGGDLMFQIQRS-RKF---DEPRSRFYAAEVTLALMFLHRHG----------------VIYRDLKLDNILLDAEGHCK 136 (321)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHeEECCCCCEE
Confidence 99988 43222221 223 33445567779999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++...... .....|++.|++||+.. .. ...+|+|+ ++|++ .++..||.+.+.....+.+......
T Consensus 137 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el-~tg~~Pf~~~~~~~~~~~i~~~~~~- 214 (321)
T cd05591 137 LADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEM-MAGQPPFEADNEDDLFESILHDDVL- 214 (321)
T ss_pred EeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHH-hcCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 99999998543222 33456899999999853 23 44567777 55555 5577788776644333333332221
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.. .+......+...+..+|..|+++.
T Consensus 215 ~p~~-~~~~~~~ll~~~L~~dp~~R~~~~ 242 (321)
T cd05591 215 YPVW-LSKEAVSILKAFMTKNPNKRLGCV 242 (321)
T ss_pred CCCC-CCHHHHHHHHHHhccCHHHcCCCC
Confidence 1211 122345667777788999998764
No 53
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=1e-29 Score=236.40 Aligned_cols=228 Identities=16% Similarity=0.167 Sum_probs=164.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+++.||||++++... .......+..|..++..+ +|||| +++++++.+.+.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i--------v~~~~~~~~~~~~~iv~E 76 (320)
T cd05590 5 KGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL--------TQLYCCFQTPDRLFFVME 76 (320)
T ss_pred eCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCch--------hceeeEEEcCCEEEEEEc
Confidence 57788999999999999999999986432 222334556788888776 69999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +...... ...+ .......++.|++.||.|||+++ |+||||||+|||+++++.+|
T Consensus 77 y~~~g~L~~~i~~-~~~l---~~~~~~~~~~ql~~~L~~lH~~~----------------ivH~dlkp~NIli~~~~~~k 136 (320)
T cd05590 77 FVNGGDLMFHIQK-SRRF---DEARARFYAAEITSALMFLHDKG----------------IIYRDLKLDNVLLDHEGHCK 136 (320)
T ss_pred CCCCchHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeCCCCHHHeEECCCCcEE
Confidence 99998 4322222 1233 34445567779999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... ......||+.|++||+.. ..+ ..+|+|+ ++|++ ..+..||.+.+.....+.+......
T Consensus 137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el-~~g~~Pf~~~~~~~~~~~i~~~~~~- 214 (320)
T cd05590 137 LADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEM-LCGHAPFEAENEDDLFEAILNDEVV- 214 (320)
T ss_pred EeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHH-hhCCCCCCCCCHHHHHHHHhcCCCC-
Confidence 9999999854322 234456899999999853 333 4556666 55555 4567788766543333333332221
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+ ...+....+.+...+..||..|+++.
T Consensus 215 ~~-~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 215 YP-TWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CC-CCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 22 11222445667777788999999873
No 54
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=3.9e-30 Score=234.73 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=146.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+++.||||+++.........+.+.+|+++++.++|||| +++++++..++.+|+||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07848 11 EGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI--------VELKEAFRRRGKLYLVFEYV 82 (287)
T ss_pred ccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccc--------cchhhhEecCCEEEEEEecC
Confidence 4677899999999999999999998765544455677889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ ++.+... ...+ ....+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 83 ~~~~l~~~~~~-~~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------i~H~dlkp~Nill~~~~~~kl~ 142 (287)
T cd07848 83 EKNMLELLEEM-PNGV---PPEKVRSYIYQLIKAIHWCHKND----------------IVHRDIKPENLLISHNDVLKLC 142 (287)
T ss_pred CCCHHHHHHhc-CCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEEcCCCcEEEe
Confidence 999 4433222 1222 44455667789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC---CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP---HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~---~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||+++....... ....|+..|++||+.. .. +..+|+|+ ++|++ ..+.+||.+.+
T Consensus 143 Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el-~~g~~pf~~~~ 205 (287)
T cd07848 143 DFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGEL-SDGQPLFPGES 205 (287)
T ss_pred eccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHH-HhCCCCCCCCC
Confidence 9999987654322 2346788999999842 23 44566666 55555 45667876654
No 55
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=1.3e-29 Score=240.77 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=143.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||+|.++.+|+.||||++.+... .....+.+.+|+++++.++|||| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--------v~~~~~~~~~~~~~lv~E~ 82 (377)
T cd05629 11 KGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWV--------VSLYYSFQDAQYLYLIMEF 82 (377)
T ss_pred ecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEEcCCeeEEEEeC
Confidence 46778999999999999999999976433 23344567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+... ...+ ....+..++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 83 ~~gg~L~~~l~~-~~~~---~~~~~~~~~~ql~~aL~~LH~~g----------------ivHrDlkp~NIll~~~~~~kl 142 (377)
T cd05629 83 LPGGDLMTMLIK-YDTF---SEDVTRFYMAECVLAIEAVHKLG----------------FIHRDIKPDNILIDRGGHIKL 142 (377)
T ss_pred CCCCcHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHEEECCCCCEEE
Confidence 9888 4333222 1233 33444556779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-------------------------------------------------CCccccCcccccccccc-
Q psy6542 170 SDLGLACDFSKKK-------------------------------------------------PHASVESDCILHGYIKK- 199 (334)
Q Consensus 170 ~DFGla~~~~~~~-------------------------------------------------~~~~~~t~~~~~~~v~~- 199 (334)
+|||+++.+.... ....+||+.|++||+..
T Consensus 143 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 222 (377)
T cd05629 143 SDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ 222 (377)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc
Confidence 9999996432110 01246899999999843
Q ss_pred ccC-Ccceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 200 LGG-PFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 200 ~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
..+ ..+|+|+ ++|++ .++.+||.+.+.
T Consensus 223 ~~~~~~~DiwSlGvil~el-ltG~~Pf~~~~~ 253 (377)
T cd05629 223 QGYGQECDWWSLGAIMFEC-LIGWPPFCSENS 253 (377)
T ss_pred CCCCCceeeEecchhhhhh-hcCCCCCCCCCH
Confidence 334 4566666 55555 567778876553
No 56
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=9.4e-30 Score=240.35 Aligned_cols=189 Identities=19% Similarity=0.222 Sum_probs=145.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.+++.+.||+|.++.+|+.||||+++.... .......+.+|+.++..++|++| +++++.+.+++.+|+|||
T Consensus 10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------v~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 10 GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWV--------VKMFYSFQDKRNLYLIME 81 (360)
T ss_pred eeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCE--------eeEEEEEEcCCEEEEEEe
Confidence 357788999999999999999999986432 23344577889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +..+.... ..+ ....+..++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 82 ~~~gg~L~~~l~~~-~~l---~~~~~~~~~~qi~~~L~~lH~~g----------------ivHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 82 FLPGGDMMTLLMKK-DTL---SEEATQFYIAETVLAIDAIHQLG----------------FIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred CCCCccHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEccCCCHHHEEECCCCCEE
Confidence 99998 43332221 223 34445566779999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC-------------------------------------CCccccCccccccccc-cccCC-cceeeh
Q psy6542 169 ISDLGLACDFSKKK-------------------------------------PHASVESDCILHGYIK-KLGGP-FVSAWQ 209 (334)
Q Consensus 169 l~DFGla~~~~~~~-------------------------------------~~~~~~t~~~~~~~v~-~~~~~-~~~~w~ 209 (334)
|+|||+++...... ....+||+.|++||+. ..+++ .+|+|+
T Consensus 142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 221 (360)
T cd05627 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (360)
T ss_pred EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence 99999987543211 1234689999999984 33444 455555
Q ss_pred ---hHHHHHcCCCCCCCCCCCC
Q psy6542 210 ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 210 ---~~~~~l~~~~~~~~~~~~~ 228 (334)
++|++ .++.+||.+.+..
T Consensus 222 lGvilyel-~tG~~Pf~~~~~~ 242 (360)
T cd05627 222 LGVIMYEM-LIGYPPFCSETPQ 242 (360)
T ss_pred ccceeeec-ccCCCCCCCCCHH
Confidence 55555 5567788766543
No 57
>KOG0696|consensus
Probab=99.97 E-value=8e-31 Score=238.84 Aligned_cols=230 Identities=15% Similarity=0.153 Sum_probs=182.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
++|.++|-+|..+.|.+.+|||+++++.. .+........|-++|....-|.. .++++..|++-+++|+||||
T Consensus 359 KGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppF-------L~qlHScFQTmDRLyFVMEy 431 (683)
T KOG0696|consen 359 KGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPF-------LVQLHSCFQTMDRLYFVMEY 431 (683)
T ss_pred cCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCch-------HHHHHHHhhhhhheeeEEEE
Confidence 58899999999999999999999998865 22233455668888888765542 39999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.||.......+.+.+.+..+ +.++.+|+-||-|||+++ ||.||||.+||+++.+|++||+
T Consensus 432 vnGGDLMyhiQQ~GkFKEp~A---vFYAaEiaigLFFLh~kg----------------IiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 432 VNGGDLMYHIQQVGKFKEPVA---VFYAAEIAIGLFFLHSKG----------------IIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred ecCchhhhHHHHhcccCCchh---hhhhHHHHHHhhhhhcCC----------------eeeeeccccceEeccCCceEee
Confidence 999944444555556644344 445569999999999999 9999999999999999999999
Q ss_pred ecccccc--cCCCCCCccccCccccccccc-cccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 171 DLGLACD--FSKKKPHASVESDCILHGYIK-KLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 171 DFGla~~--~~~~~~~~~~~t~~~~~~~v~-~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|||+++. +....+.++||||-|++||+. -.+|..+.||| ++||||+ +++||.|++.+..++.|.-...+ .|
T Consensus 493 DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla-GQpPFdGeDE~elF~aI~ehnvs-yP 570 (683)
T KOG0696|consen 493 DFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDELFQAIMEHNVS-YP 570 (683)
T ss_pred ecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHccCc-Cc
Confidence 9999984 444556789999999999984 46699999999 6666655 57799999998888887666554 44
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..++. .+.......+.+.|..|++|-
T Consensus 571 KslSk-EAv~ickg~ltK~P~kRLGcg 596 (683)
T KOG0696|consen 571 KSLSK-EAVAICKGLLTKHPGKRLGCG 596 (683)
T ss_pred ccccH-HHHHHHHHHhhcCCccccCCC
Confidence 44441 344445556688999999987
No 58
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=1.6e-29 Score=237.11 Aligned_cols=227 Identities=18% Similarity=0.161 Sum_probs=164.0
Q ss_pred CCCceEEEeceeCCCC-CcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLG-FPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~-~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.++ ..||+|.+.+... .....+.+.+|+++++.++|||| +++++++.+++.+|+|||
T Consensus 40 ~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I--------v~~~~~~~~~~~~~lv~E 111 (340)
T PTZ00426 40 TGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC--------VNLYGSFKDESYLYLVLE 111 (340)
T ss_pred ecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCC--------cceEEEEEeCCEEEEEEe
Confidence 5677899999877665 6899999976433 22334567789999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +..+.... ..+ .......++.|++.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 112 y~~~g~L~~~i~~~-~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 112 FVIGGEFFTFLRRN-KRF---PNDVGCFYAAQIVLIFEYLQSLN----------------IVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEccCCCHHHEEECCCCCEE
Confidence 99888 43332222 123 34445567789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|+|||+++..... .....||+.|++||+.. .. +..+|+|+ ++|+++ .+.+||.+.+.......+..... ..+
T Consensus 172 L~DFG~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-~G~~Pf~~~~~~~~~~~i~~~~~-~~p 248 (340)
T PTZ00426 172 MTDFGFAKVVDTR-TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL-VGCPPFYANEPLLIYQKILEGII-YFP 248 (340)
T ss_pred EecCCCCeecCCC-cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh-cCCCCCCCCCHHHHHHHHhcCCC-CCC
Confidence 9999999876543 34567899999999853 22 34556666 555554 56678876553322333322222 122
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.. .+......+...+..+|..|++..
T Consensus 249 ~~-~~~~~~~li~~~l~~dp~~R~~~~ 274 (340)
T PTZ00426 249 KF-LDNNCKHLMKKLLSHDLTKRYGNL 274 (340)
T ss_pred CC-CCHHHHHHHHHHcccCHHHcCCCC
Confidence 22 222445677777788999998643
No 59
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=1.2e-29 Score=241.03 Aligned_cols=186 Identities=17% Similarity=0.189 Sum_probs=142.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||+|.++.+|+.||||++.+... .......+.+|+++++.++|+|| +++++.+.+++.+|+||||
T Consensus 11 ~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i--------v~~~~~~~~~~~~~lv~E~ 82 (376)
T cd05598 11 IGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV--------VKLYYSFQDKDNLYFVMDY 82 (376)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc--------ceEEEEEEcCCEEEEEEeC
Confidence 56778999999999999999999975433 22234567789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+|+ +..+.... ..+ ....+..++.||+.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~~g~L~~~i~~~-~~~---~~~~~~~~~~qi~~al~~lH~~~----------------ivHrDlkp~Nill~~~~~ikL 142 (376)
T cd05598 83 IPGGDMMSLLIRL-GIF---EEDLARFYIAELTCAIESVHKMG----------------FIHRDIKPDNILIDRDGHIKL 142 (376)
T ss_pred CCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeCCCCHHHEEECCCCCEEE
Confidence 9988 43332322 122 33444556779999999999999 999999999999999999999
Q ss_pred EecccccccCCC---------------------------------------------CCCccccCccccccccc-cccC-
Q psy6542 170 SDLGLACDFSKK---------------------------------------------KPHASVESDCILHGYIK-KLGG- 202 (334)
Q Consensus 170 ~DFGla~~~~~~---------------------------------------------~~~~~~~t~~~~~~~v~-~~~~- 202 (334)
+|||+|..+... .....+||+.|++||+. ...+
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 222 (376)
T cd05598 143 TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT 222 (376)
T ss_pred EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC
Confidence 999998533100 01134689999999984 3334
Q ss_pred Ccceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 203 PFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 203 ~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
..+|+|+ ++|++ ..+..||.+.+
T Consensus 223 ~~~DiwSlGvilyel-l~G~~Pf~~~~ 248 (376)
T cd05598 223 QLCDWWSVGVILYEM-LVGQPPFLADT 248 (376)
T ss_pred cceeeeeccceeeeh-hhCCCCCCCCC
Confidence 4566666 55555 55677887665
No 60
>KOG4236|consensus
Probab=99.97 E-value=9.4e-30 Score=237.71 Aligned_cols=184 Identities=17% Similarity=0.257 Sum_probs=155.5
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCC
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSG 93 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g 93 (334)
-++-||-+.++.||+.||||+|.+.+....-...+.+|+.||+++.||.| |.+..-|++.+++++|||-+.|
T Consensus 576 QFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGi--------V~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 576 QFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGI--------VNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred cceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCe--------eEEEEeecCCceEEEEehhhcc
Confidence 46789999999999999999999888754455688899999999999999 9999999999999999999999
Q ss_pred C-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC---CCEEE
Q psy6542 94 P-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH---GHVRI 169 (334)
Q Consensus 94 ~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~---~~vkl 169 (334)
+ ++.+..+...++++...++++. ||+.||.|||.++ |+|.||||+|||+.+. -++||
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvt---QIL~ALr~LH~kn----------------IvHCDLKPENVLLas~~~FPQvKl 708 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVT---QILVALRYLHFKN----------------IVHCDLKPENVLLASASPFPQVKL 708 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHH---HHHHHHHHhhhcc----------------eeeccCCchheeeccCCCCCceee
Confidence 9 8888888888887766666655 9999999999999 9999999999999775 35999
Q ss_pred EecccccccCCCC-CCccccCccccccccc-cccCCc-ceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK-PHASVESDCILHGYIK-KLGGPF-VSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~-~~~~~~t~~~~~~~v~-~~~~~~-~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
||||+|+.++++. ..+..|||.|++||++ .+||.+ -|+|+ ++|.. ..+.+||.-+
T Consensus 709 CDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVs-LSGTFPFNEd 769 (888)
T KOG4236|consen 709 CDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVS-LSGTFPFNED 769 (888)
T ss_pred ccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEE-ecccccCCCc
Confidence 9999999998876 4667899999999995 556655 56666 44444 4566676443
No 61
>KOG0658|consensus
Probab=99.96 E-value=4.7e-30 Score=231.30 Aligned_cols=184 Identities=19% Similarity=0.151 Sum_probs=143.1
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--C---eEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--N---SHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~---~~~ 85 (334)
.+||++.||.|...++++.||||.+-.+..- -.+|+++|+.++|||| |++..+|... + .+.
T Consensus 33 G~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~HpNI--------V~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 33 GSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLDHPNI--------VRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred eecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcCCcCe--------eeEEEEEEecCCCchhHHH
Confidence 4689999999999999999999998865441 1249999999999999 9997777632 2 356
Q ss_pred EEEEccCCChhHHhhhh---hhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 86 IIGVRQSGPKDQISRSK---INRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~---~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
+||||++..+....++- ....+....+ -+..||.+||.|||+.+ |+||||||+|+|+|
T Consensus 99 lVleymP~tL~~~~r~~~~~~~~mp~~~iK---LYt~Qlfrgl~yLh~~~----------------IcHRDIKPqNlLvD 159 (364)
T KOG0658|consen 99 LVLEYMPETLYRVIRHYTRANQRMPLLEIK---LYTYQLFRGLAYLHSHG----------------ICHRDIKPQNLLVD 159 (364)
T ss_pred HHHHhchHHHHHHHHHHhhcCCCCceeeeH---HHHHHHHHHHHHHHhcC----------------cccCCCChheEEEc
Confidence 99999999965554532 1233333333 34559999999999999 99999999999999
Q ss_pred CC-CCEEEEecccccccCCCCCCc-cccCcccccccc---ccccCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 163 EH-GHVRISDLGLACDFSKKKPHA-SVESDCILHGYI---KKLGGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 163 ~~-~~vkl~DFGla~~~~~~~~~~-~~~t~~~~~~~v---~~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
.+ |.+||||||.|+.+..+.++. +.-|-+|-|||+ +..++..-|+|| |+.+.|.-+.+-|.|++.
T Consensus 160 ~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~ 231 (364)
T KOG0658|consen 160 PDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS 231 (364)
T ss_pred CCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH
Confidence 88 889999999999887776554 445889999998 345566677777 777777777777888764
No 62
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=2.1e-29 Score=234.47 Aligned_cols=228 Identities=16% Similarity=0.152 Sum_probs=160.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHH-HHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQE-IFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~-il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+|+.||||++.+... .....+.+..|.. +++.++|||| +++++.+.+++.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~i--------v~~~~~~~~~~~~~lv~e 76 (323)
T cd05575 5 KGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL--------VGLHYSFQTADKLYFVLD 76 (323)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCC--------CCeeEEEEeCCEEEEEEc
Confidence 47888999999999999999999986433 2222234444544 5688999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +...... ...+ .......++.||+.||.|||+++ |+||||||+|||+++++.+|
T Consensus 77 ~~~~g~L~~~l~~-~~~~---~~~~~~~~~~qi~~~l~~lH~~g----------------ivH~dikp~NIll~~~~~~k 136 (323)
T cd05575 77 YVNGGELFFHLQR-ERSF---PEPRARFYAAEIASALGYLHSLN----------------IIYRDLKPENILLDSQGHVV 136 (323)
T ss_pred CCCCCCHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeCCCCHHHeEECCCCcEE
Confidence 99998 4322222 1223 34445567789999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... .....+||+.|++||+.. .. ...+|+|+ ++|++ ..+..||.+.+.....+.+......
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el-l~g~~pf~~~~~~~~~~~i~~~~~~- 214 (323)
T cd05575 137 LTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEM-LYGLPPFYSRDTAEMYDNILNKPLR- 214 (323)
T ss_pred EeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhh-hcCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 9999999754322 233456899999999843 23 34566676 55555 5566788665432222222222211
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+... +....+.+...+..+|..|++..
T Consensus 215 ~~~~~-~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LKPNI-SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCC-CHHHHHHHHHHhhcCHHhCCCCC
Confidence 22222 22345667777788999998864
No 63
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=2.7e-29 Score=238.32 Aligned_cols=187 Identities=17% Similarity=0.154 Sum_probs=146.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+++.||||++.+... .......+.+|+.+++.++|||| +++++++.+++.+|+||||
T Consensus 53 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i--------v~~~~~~~~~~~~~lv~Ey 124 (370)
T cd05596 53 RGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI--------VQLHYAFQDDKYLYMVMEY 124 (370)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc--------ceEEEEEecCCEEEEEEcC
Confidence 47788999999999999999999986432 22233457789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|| +..+.... .+ .......++.|++.||.|||+++ |+||||||+|||+++++.+||
T Consensus 125 ~~gg~L~~~l~~~--~l---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDLkp~NILl~~~~~~kL 183 (370)
T cd05596 125 MPGGDLVNLMSNY--DI---PEKWARFYTAEVVLALDAIHSMG----------------FIHRDVKPDNMLLDKSGHLKL 183 (370)
T ss_pred CCCCcHHHHHHhc--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHEEEcCCCCEEE
Confidence 9988 54443321 22 33445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC---CCccccCccccccccccc------cCCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK---PHASVESDCILHGYIKKL------GGPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 170 ~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~------~~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
+|||++....... .....||+.|++||+... ....+|+|+ ++|++ ..+.+||.+.+..
T Consensus 184 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyel-ltG~~Pf~~~~~~ 253 (370)
T cd05596 184 ADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM-LVGDTPFYADSLV 253 (370)
T ss_pred EeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHH-HhCCCCcCCCCHH
Confidence 9999998765432 234578999999998432 234566666 55555 5577788776643
No 64
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=3.9e-29 Score=227.88 Aligned_cols=190 Identities=17% Similarity=0.150 Sum_probs=146.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+|+.||||.+...... ....+.+..|+++++.++|+|| +++++++..++.+|+||||
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i--------~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 3 KGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI--------VSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE--------eeeeEEEcCCCeEEEEEeC
Confidence 577889999999999999999999865432 2223456789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +.....................++.|++.||.|||+++ |+||||||+||++++++.++|
T Consensus 75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dlkp~Nili~~~~~~~l 138 (280)
T cd05608 75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR----------------IIYRDLKPENVLLDNDGNVRI 138 (280)
T ss_pred CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCCCEEE
Confidence 9988 54332221111122345556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....|++.|++||+.. ..+..+|+|+ ++|+++ .+..||...+
T Consensus 139 ~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~g~~pf~~~~ 201 (280)
T cd05608 139 SDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMI-AARGPFRARG 201 (280)
T ss_pred eeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCC
Confidence 99999987654432 3346789999999853 2244677777 555655 4666776544
No 65
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=3.3e-29 Score=237.76 Aligned_cols=187 Identities=17% Similarity=0.158 Sum_probs=146.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+++.||+|++.+... .....+.+.+|..+++.++|||| +++++++.+++.+|+||||
T Consensus 53 ~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i--------v~~~~~~~~~~~~~lv~Ey 124 (371)
T cd05622 53 RGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV--------VQLFYAFQDDRYLYMVMEY 124 (371)
T ss_pred ecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC--------CeEEEEEEcCCEEEEEEcC
Confidence 57788999999999999999999975432 22234467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... .+ .......++.||+.||.|||+++ |+||||||+|||+++++.+||
T Consensus 125 ~~gg~L~~~~~~~--~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 125 MPGGDLVNLMSNY--DV---PEKWARFYTAEVVLALDAIHSMG----------------FIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred CCCCcHHHHHHhc--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------EEeCCCCHHHEEECCCCCEEE
Confidence 9988 54443321 23 33444556779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC---CCccccCccccccccccc------cCCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK---PHASVESDCILHGYIKKL------GGPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 170 ~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~------~~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
+|||+++...... .....||+.|++||+... ....+|+|+ ++|+++ .+.+||.+.+..
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~~ 253 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSLV 253 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHH-hCCCCCCCCCHH
Confidence 9999998765432 235678999999998532 234566666 556655 567788776543
No 66
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=2.2e-29 Score=234.51 Aligned_cols=228 Identities=16% Similarity=0.110 Sum_probs=160.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHH-HHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQE-IFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~-il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+|+.||||++.+... .....+.+..|.. +++.++|||| +++++++..++.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~i--------v~~~~~~~~~~~~~lv~e 76 (325)
T cd05604 5 KGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFL--------VGLHYSFQTTEKLYFVLD 76 (325)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCC--------ccEEEEEecCCEEEEEEc
Confidence 57788999999999999999999986533 2222334444544 5788999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +...... ...+ ....+..++.||+.||.|||+.+ |+||||||+|||+++++.+|
T Consensus 77 ~~~~~~L~~~l~~-~~~~---~~~~~~~~~~qi~~al~~lH~~g----------------ivH~Dlkp~NIll~~~~~~k 136 (325)
T cd05604 77 FVNGGELFFHLQR-ERSF---PEPRARFYAAEIASALGYLHSIN----------------IVYRDLKPENILLDSQGHVV 136 (325)
T ss_pred CCCCCCHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCCHHHeEECCCCCEE
Confidence 99998 4222221 1223 44455567779999999999999 99999999999999999999
Q ss_pred EEecccccccCC--CCCCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSK--KKPHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~--~~~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++.... .......|++.|++||+... . ...+|+|+ ++|+++ .+..||.+.+.......+......
T Consensus 137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~G~~pf~~~~~~~~~~~~~~~~~~- 214 (325)
T cd05604 137 LTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML-YGLPPFYCRDVAEMYDNILHKPLV- 214 (325)
T ss_pred EeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhh-cCCCCCCCCCHHHHHHHHHcCCcc-
Confidence 999999975432 22344568999999998532 2 34566666 556654 566788766533222322222211
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...... ......+...+..+|..|++..
T Consensus 215 ~~~~~~-~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 215 LRPGAS-LTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred CCCCCC-HHHHHHHHHHhccCHHhcCCCC
Confidence 111211 1334566666678888888764
No 67
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=3.6e-29 Score=245.09 Aligned_cols=232 Identities=12% Similarity=0.082 Sum_probs=163.8
Q ss_pred CCCCceEEEeceeCCC-CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPL-GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~-~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.+++.+.||+|.+..+ ++.||+|.+..... .....+.+|+.+++.++|||| |++++++.+++.+|||||
T Consensus 76 g~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~--~~~~~~~~E~~~l~~l~Hpni--------v~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 76 GRNPTTAAFVATRGSDPKEKVVAKFVMLNDE--RQAAYARSELHCLAACDHFGI--------VKHFDDFKSDDKLLLIME 145 (478)
T ss_pred EeCCCcEEEEEEEcCCCCeEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCE--------eEEEEEEEECCEEEEEEE
Confidence 3688889999999888 88899998754432 233467789999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +.....................++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~----------------ivHrDlkp~NIll~~~~~~k 209 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK----------------MMHRDLKSANIFLMPTGIIK 209 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC----------------EEECCcCHHhEEECCCCcEE
Confidence 99988 54332222211122244555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC----CCccccCcccccccccc-ccCC-cceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccc
Q psy6542 169 ISDLGLACDFSKKK----PHASVESDCILHGYIKK-LGGP-FVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQI 239 (334)
Q Consensus 169 l~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~-~~~~-~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 239 (334)
|+|||+++.+.... ....+||+.|++||+.. ..++ .+|+|+ ++|+++ ++..||.+.+.......+.....
T Consensus 210 L~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~-tg~~Pf~~~~~~~~~~~~~~~~~ 288 (478)
T PTZ00267 210 LGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL-TLHRPFKGPSQREIMQQVLYGKY 288 (478)
T ss_pred EEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC
Confidence 99999998765432 23456899999999853 3344 456666 555554 56778766543222222222222
Q ss_pred cccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 240 EEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...+.... ......+..++..+|..|++..
T Consensus 289 ~~~~~~~s-~~~~~li~~~L~~dP~~Rps~~ 318 (478)
T PTZ00267 289 DPFPCPVS-SGMKALLDPLLSKNPALRPTTQ 318 (478)
T ss_pred CCCCccCC-HHHHHHHHHHhccChhhCcCHH
Confidence 22222222 1334566666677888887754
No 68
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=3.3e-29 Score=232.85 Aligned_cols=228 Identities=17% Similarity=0.124 Sum_probs=160.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHH-HHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQ-EIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~-~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.+..+|+.||||++.+... .....+.+..|. .+++.++|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~i--------v~~~~~~~~~~~~~lv~e 76 (321)
T cd05603 5 KGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFL--------VGLHYSFQTAEKLYFVLD 76 (321)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCc--------cceeeEEEcCCEEEEEEc
Confidence 47788999999999999999999986543 222233444454 46889999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +...... ...+ .......++.||+.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 77 ~~~~~~L~~~l~~-~~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------ivH~Dlkp~NIll~~~~~~k 136 (321)
T cd05603 77 YVNGGELFFHLQR-ERCF---LEPRARFYAAEVASAIGYLHSLN----------------IIYRDLKPENILLDSQGHVV 136 (321)
T ss_pred CCCCCCHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeccCCHHHeEECCCCCEE
Confidence 99998 4222222 1223 33444556779999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... .....+|++.|++||+.. .. ...+|+|+ ++|++ ..+..||.+.+.....+.+.... ..
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el-~~g~~pf~~~~~~~~~~~i~~~~-~~ 214 (321)
T cd05603 137 LTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEM-LYGLPPFYSRDVSQMYDNILHKP-LQ 214 (321)
T ss_pred EccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhh-hcCCCCCCCCCHHHHHHHHhcCC-CC
Confidence 9999999854222 234456899999999843 22 34566677 55555 55677887765332223222221 12
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.... ....+.+...+..+|..|++..
T Consensus 215 ~~~~~~-~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKT-VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCC-HHHHHHHHHHccCCHhhcCCCC
Confidence 222222 2345677777788999998754
No 69
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=2.4e-29 Score=233.45 Aligned_cols=228 Identities=18% Similarity=0.177 Sum_probs=161.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++...||+|.+..+++.||||+++.... .....+.+..|..++.. .+|||| +++++++..++.+|+|||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i--------~~~~~~~~~~~~~~lv~e 76 (316)
T cd05592 5 KGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL--------THLFCTFQTKEHLFFVME 76 (316)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCc--------cceeeEEEcCCEEEEEEc
Confidence 47788999999999999999999986532 22223344556667665 589999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 77 ~~~gg~L~~~~~~~-~~~---~~~~~~~~~~qi~~al~~LH~~~----------------ivH~dlkp~Nill~~~~~~k 136 (316)
T cd05592 77 YLNGGDLMFHIQSS-GRF---DEARARFYAAEIICGLQFLHKKG----------------IIYRDLKLDNVLLDKDGHIK 136 (316)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EEeCCCCHHHeEECCCCCEE
Confidence 99988 43332221 223 44445567789999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... .....+||+.|++||+.. ..+..+|+|+ ++|+++ .+..||.+.+.......+.... ..
T Consensus 137 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell-~G~~Pf~~~~~~~~~~~i~~~~-~~ 214 (316)
T cd05592 137 IADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEML-IGQSPFHGEDEDELFDSILNDR-PH 214 (316)
T ss_pred EccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCC-CC
Confidence 9999999864332 234457899999999843 2345667777 556665 4677887665332222222211 11
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.. .+.....++...+..+|..|++..
T Consensus 215 ~~~~-~~~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 215 FPRW-ISKEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred CCCC-CCHHHHHHHHHHccCCHHHcCCCh
Confidence 2212 222345667777788899988754
No 70
>KOG1026|consensus
Probab=99.96 E-value=3.6e-30 Score=253.18 Aligned_cols=243 Identities=15% Similarity=0.064 Sum_probs=188.2
Q ss_pred CCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
.+-+++||+|+... +.+.||||.++.... ....+.|++|++++..|+|||| |++++++..++.+||
T Consensus 496 egaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H~nI--------VrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 496 EGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQHPNI--------VRLLGVCREGDPLCM 566 (774)
T ss_pred CchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccCCCe--------EEEEEEEccCCeeEE
Confidence 34567899998754 446799999996654 3367789999999999999999 999999999999999
Q ss_pred EEEccCCC-h-hHHhhhhhhh---------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC
Q psy6542 87 IGVRQSGP-K-DQISRSKINR---------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK 155 (334)
Q Consensus 87 vmEy~~g~-l-~~l~~~~~~~---------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK 155 (334)
|+|||..| + +++..+.... .+++....++.|+.||+.|+.||-++. ++||||-
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~----------------FVHRDLA 630 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH----------------FVHRDLA 630 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc----------------ccccchh
Confidence 99999888 4 3343321110 122566778899999999999999999 9999999
Q ss_pred CCceeeCCCCCEEEEecccccccCCCCCCccc----cCcccccccc--ccccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 156 PANILLDEHGHVRISDLGLACDFSKKKPHASV----ESDCILHGYI--KKLGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 156 p~NiLl~~~~~vkl~DFGla~~~~~~~~~~~~----~t~~~~~~~v--~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
..|+|++++-.|||+||||++..-........ =...+||||. ....++.+|+|+ ++||.+..+..|+++.+
T Consensus 631 TRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 631 TRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred hhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 99999999999999999999976555433222 2578899996 466688999999 99999999999999888
Q ss_pred CCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch--hHHHH
Q psy6542 227 GQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC--SQELL 304 (334)
Q Consensus 227 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~--~~~lL 304 (334)
++..-+.+...++ +.|+ ...|.++.++|+.||...+..+.+. ....|
T Consensus 711 n~EVIe~i~~g~l---------------------------L~~P----e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L 759 (774)
T KOG1026|consen 711 NQEVIECIRAGQL---------------------------LSCP----ENCPTEVYSLMLECWNENPKRRPSFKEIHSRL 759 (774)
T ss_pred hHHHHHHHHcCCc---------------------------ccCC----CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 6544444333333 3333 5677888999999999876555544 66667
Q ss_pred HHHHHH
Q psy6542 305 GSMARK 310 (334)
Q Consensus 305 ~~l~~~ 310 (334)
+++...
T Consensus 760 ~~~~~~ 765 (774)
T KOG1026|consen 760 QAWAQA 765 (774)
T ss_pred HHHHhc
Confidence 766554
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=6e-29 Score=232.13 Aligned_cols=228 Identities=16% Similarity=0.166 Sum_probs=163.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.+++.||||++++... +......+..|..++..+ +|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~I--------v~~~~~~~~~~~~~lv~e 76 (329)
T cd05588 5 RGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFL--------VGLHSCFQTESRLFFVIE 76 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCC--------CceEEEEEcCCEEEEEEe
Confidence 57788999999999999999999986543 223345677899999988 79999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +...... ...+ ....+..++.|++.||.|||+++ ++||||||+|||+++++.+|
T Consensus 77 ~~~~g~L~~~~~~-~~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nili~~~~~~k 136 (329)
T cd05588 77 FVSGGDLMFHMQR-QRKL---PEEHARFYSAEISLALNFLHERG----------------IIYRDLKLDNVLLDAEGHIK 136 (329)
T ss_pred CCCCCCHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHeEECCCCCEE
Confidence 99998 4322221 1233 44555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCC--CCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCC---------ccc
Q psy6542 169 ISDLGLACDFSK--KKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQS---------KPE 232 (334)
Q Consensus 169 l~DFGla~~~~~--~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~---------~~~ 232 (334)
|+|||+++.... ......+||+.|++||+.. .. +..+|+|+ ++|++ .++..||...+... ..+
T Consensus 137 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el-~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 137 LTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM-MAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred ECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHH-HHCCCCcccccccccccccchHHHHH
Confidence 999999975322 2234467899999999853 23 34566676 55555 45677875432211 111
Q ss_pred chhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 233 LIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.... ...+.... ......+...+..+|..|+++.
T Consensus 216 ~~~~~~-~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~ 251 (329)
T cd05588 216 VILEKQ-IRIPRSLS-VKASSVLKGFLNKDPKERLGCH 251 (329)
T ss_pred HHHcCC-CCCCCCCC-HHHHHHHHHHhccCHHHcCCCC
Confidence 111111 12222222 2345667777788999999864
No 72
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=1.7e-29 Score=235.63 Aligned_cols=229 Identities=17% Similarity=0.136 Sum_probs=162.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc---CCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL---RNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l---~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+++...||+|.++.+|+.||||++.+... ..........|..++..+ +|||| +++++++.+++.+|+|
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i--------~~~~~~~~~~~~~~lv 74 (330)
T cd05586 3 KGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFI--------VGLKFSFQTDSDLYLV 74 (330)
T ss_pred CCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcC--------cceEEEEecCCeEEEE
Confidence 47788999999999999999999975432 112223445567777665 69999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.|+ +...... ...+ ....+..++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 75 ~e~~~~g~L~~~l~~-~~~~---~~~~~~~~~~qil~al~~LH~~~----------------ivHrDlkp~Nili~~~~~ 134 (330)
T cd05586 75 TDYMSGGELFWHLQK-EGRF---SEDRAKFYIAELVLALEHLHKYD----------------IVYRDLKPENILLDATGH 134 (330)
T ss_pred EcCCCCChHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEeccCCHHHeEECCCCC
Confidence 9999988 4322222 1233 44555667779999999999999 999999999999999999
Q ss_pred EEEEecccccccCCC--CCCccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 167 VRISDLGLACDFSKK--KPHASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 167 vkl~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
+||+|||+++..... .....+||..|++||+.. . ....+|+|+ ++|++ .++..||.+.........+....
T Consensus 135 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~el-ltG~~Pf~~~~~~~~~~~i~~~~ 213 (330)
T cd05586 135 IALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEM-CCGWSPFYAEDTQQMYRNIAFGK 213 (330)
T ss_pred EEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEe-ccCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999754332 234567899999999753 2 245677777 55555 45667887665333222222222
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
. ..+....+......+...+..+|..|+...
T Consensus 214 ~-~~~~~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 214 V-RFPKNVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred C-CCCCccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 2 122222222445677777788999998654
No 73
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.96 E-value=1.8e-29 Score=230.64 Aligned_cols=189 Identities=17% Similarity=0.152 Sum_probs=139.9
Q ss_pred CCCceEEEeceeCC-CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc---CCCCcccccccceeeEEEEee-----cCC
Q psy6542 12 RVSKWRVKPPSLKP-LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL---RNEPFKKCVLLFKMNLYKVTS-----EPN 82 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l---~h~~i~~~~~~~~v~~~~~~~-----~~~ 82 (334)
+++...||+|.+.. +|+.||||.++...........+.+|+.+++.+ +|||| +++++++. .+.
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpni--------v~~~~~~~~~~~~~~~ 82 (290)
T cd07862 11 EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV--------VRLFDVCTVSRTDRET 82 (290)
T ss_pred cCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCc--------ceEEEEEecccCCCCC
Confidence 57788999999864 578899999986654333334455677777765 69999 99999885 345
Q ss_pred eEEEEEEccCCChhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 83 SHYIIGVRQSGPKDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 83 ~~~ivmEy~~g~l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
.+++||||+++++..+... ....+ ....+..++.|++.||.|||+++ |+||||||+|||+
T Consensus 83 ~~~lv~e~~~~~l~~~~~~~~~~~~---~~~~~~~i~~qi~~aL~~lH~~~----------------iiH~dlkp~Nil~ 143 (290)
T cd07862 83 KLTLVFEHVDQDLTTYLDKVPEPGV---PTETIKDMMFQLLRGLDFLHSHR----------------VVHRDLKPQNILV 143 (290)
T ss_pred cEEEEEccCCCCHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeeCCCCHHHEEE
Confidence 6999999999884333222 21122 44556677889999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCCC-CCccccCcccccccccc--ccCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 162 DEHGHVRISDLGLACDFSKKK-PHASVESDCILHGYIKK--LGGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~--~~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
+.++.+||+|||+++...... .....|++.|++||+.. .....+|+|+ ++.+.++++.+||.+.+.
T Consensus 144 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~ 214 (290)
T cd07862 144 TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 214 (290)
T ss_pred cCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH
Confidence 999999999999998665443 23456789999999842 2344667777 444444567778876653
No 74
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=3.4e-29 Score=233.95 Aligned_cols=185 Identities=16% Similarity=0.169 Sum_probs=145.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.+..+|+.||||++++... .....+.+.+|+++++.++|||| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------v~~~~~~~~~~~~~lv~e~ 82 (333)
T cd05600 11 QGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL--------VKLLYAFQDDEYLYLAMEY 82 (333)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC--------ccEEEEEEcCCEEEEEEeC
Confidence 56778999999999999999999986543 22234567789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... ..+ .......++.|++.||.|||+++ |+||||||+|||+++++.+||
T Consensus 83 ~~g~~L~~~l~~~-~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nil~~~~~~~kL 142 (333)
T cd05600 83 VPGGDFRTLLNNL-GVL---SEDHARFYMAEMFEAVDALHELG----------------YIHRDLKPENFLIDASGHIKL 142 (333)
T ss_pred CCCCCHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCCHHHEEECCCCCEEE
Confidence 9988 54433321 122 34445567779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||+++.... ......|++.|++||+.. .. ...+|+|+ ++|++ ..+.+||.+.+
T Consensus 143 ~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el-l~g~~pf~~~~ 202 (333)
T cd05600 143 TDFGLSKGIVT-YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEF-LCGFPPFSGST 202 (333)
T ss_pred EeCcCCccccc-ccCCcccCccccChhHhcCCCCCCccceecchHHHhhh-hhCCCCCCCCC
Confidence 99999986654 344567899999999843 23 44566676 55555 45667876654
No 75
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=1.6e-28 Score=229.22 Aligned_cols=228 Identities=16% Similarity=0.197 Sum_probs=162.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+++.||+|++++... +....+.+.+|..++..+ +|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i--------v~~~~~~~~~~~~~lv~E 76 (329)
T cd05618 5 RGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL--------VGLHSCFQTESRLFFVIE 76 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcC--------CceeeEEEeCCEEEEEEe
Confidence 57788999999999999999999987543 333445677888888776 89999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +...... ...+ .......++.|++.||.|||+++ |+||||||+||+++.++.+|
T Consensus 77 ~~~~~~L~~~~~~-~~~l---~~~~~~~i~~qi~~~l~~lH~~~----------------ivH~Dikp~Nili~~~~~~k 136 (329)
T cd05618 77 YVNGGDLMFHMQR-QRKL---PEEHARFYSAEISLALNYLHERG----------------IIYRDLKLDNVLLDSEGHIK 136 (329)
T ss_pred CCCCCCHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeeCCCCHHHEEECCCCCEE
Confidence 99988 4322222 1233 44555667779999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcc---------c
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKP---------E 232 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~---------~ 232 (334)
|+|||+++..... ......||..|++||+.. .. +..+|+|+ ++|+++ ++..||......... +
T Consensus 137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05618 137 LTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYLFQ 215 (329)
T ss_pred EeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHh-hCCCCCccCCCcCCcccccHHHHHH
Confidence 9999999854322 233457899999999853 22 44677777 555555 466677532211111 1
Q ss_pred chhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 233 LIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.... ..++.... ......+...+..||..|+++.
T Consensus 216 ~i~~~~-~~~p~~~~-~~~~~ll~~~L~~dP~~R~~~~ 251 (329)
T cd05618 216 VILEKQ-IRIPRSLS-VKAASVLKSFLNKDPKERLGCH 251 (329)
T ss_pred HHhcCC-CCCCCCCC-HHHHHHHHHHhcCCHHHcCCCC
Confidence 111111 12232222 1334566667788999998864
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=6.2e-29 Score=231.48 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=159.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHH-HHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYI-QEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E-~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.+++.||+|++.+... .......+..| ..+++.++|||| +++++++.+++.+|+|||
T Consensus 5 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~I--------v~~~~~~~~~~~~~lv~e 76 (325)
T cd05602 5 KGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL--------VGLHFSFQTADKLYFVLD 76 (325)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCC--------CceeEEEEcCCeEEEEEe
Confidence 57788999999999999999999986433 11122233334 445788999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +....... ..+ ....+..++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 77 ~~~~~~L~~~~~~~-~~~---~~~~~~~~~~qi~~~L~~lH~~g----------------iiHrDlkp~Nili~~~~~~k 136 (325)
T cd05602 77 YINGGELFYHLQRE-RCF---LEPRARFYAAEIASALGYLHSLN----------------IVYRDLKPENILLDSQGHIV 136 (325)
T ss_pred CCCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHeEECCCCCEE
Confidence 99998 43332221 223 23344456779999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc-ccC-Ccceeeh--hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK-LGG-PFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
|+|||+++..... .....+||+.|++||+.. ..+ ..+|+|+ ++.+.|..+.+||.+.+.......+..... ..
T Consensus 137 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~ 215 (325)
T cd05602 137 LTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QL 215 (325)
T ss_pred EccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-CC
Confidence 9999999854322 234457899999999843 233 4566666 444444566778876553322222222211 11
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..... ......+...+..+|..|++..
T Consensus 216 ~~~~~-~~~~~li~~~l~~~p~~R~~~~ 242 (325)
T cd05602 216 KPNIT-NSARHLLEGLLQKDRTKRLGAK 242 (325)
T ss_pred CCCCC-HHHHHHHHHHcccCHHHCCCCC
Confidence 21222 2345667777788999998865
No 77
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=3.8e-29 Score=230.44 Aligned_cols=185 Identities=15% Similarity=0.106 Sum_probs=142.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+|+.||||+++...... ....+.+|+++++.++|||| +++++++.+++.+|+||||+
T Consensus 15 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~lv~e~~ 85 (303)
T cd07869 15 EGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANI--------VLLHDIIHTKETLTLVFEYV 85 (303)
T ss_pred ecCCEEEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCc--------CeEEEEEecCCeEEEEEECC
Confidence 4677899999999999999999998654322 22346679999999999999 99999999999999999999
Q ss_pred CCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
++++ +.+... ...+ ....+..++.|++.||.|||+++ |+||||||+|||+++++.+||+
T Consensus 86 ~~~l~~~~~~~-~~~~---~~~~~~~~~~qi~~al~~lH~~~----------------ivH~dlkp~Nill~~~~~~kl~ 145 (303)
T cd07869 86 HTDLCQYMDKH-PGGL---HPENVKLFLFQLLRGLSYIHQRY----------------ILHRDLKPQNLLISDTGELKLA 145 (303)
T ss_pred CcCHHHHHHhC-CCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEEC
Confidence 9884 344322 2223 34445667789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||+++...... .....++..|++||+.. .. ...+|+|+ ++|++ .++..||.+..
T Consensus 146 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l-~~g~~pf~~~~ 208 (303)
T cd07869 146 DFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEM-IQGVAAFPGMK 208 (303)
T ss_pred CCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCc
Confidence 999997543322 23356788999999742 23 34566677 45555 55666876543
No 78
>KOG0612|consensus
Probab=99.96 E-value=1.3e-30 Score=261.15 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=177.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
||.++.|.+++++.|++.||+|++++-.. .......|..|-.||..-+.+-| |+++-+|++++++|+||||
T Consensus 85 rGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wi--------v~LhyAFQD~~~LYlVMdY 156 (1317)
T KOG0612|consen 85 RGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWI--------VQLHYAFQDERYLYLVMDY 156 (1317)
T ss_pred ccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHH--------HHHHHHhcCccceEEEEec
Confidence 78899999999999999999999997443 23334578899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|| +--+ .++...+++..+.++ +.+|+.||+-||+.| +|||||||+|||+|..|++||
T Consensus 157 ~pGGDlltL-lSk~~~~pE~~ArFY---~aEiVlAldslH~mg----------------yVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 157 MPGGDLLTL-LSKFDRLPEDWARFY---TAEIVLALDSLHSMG----------------YVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred ccCchHHHH-HhhcCCChHHHHHHH---HHHHHHHHHHHHhcc----------------ceeccCCcceeEecccCcEee
Confidence 9999 3222 222224544444444 459999999999999 999999999999999999999
Q ss_pred EecccccccCCCC---CCccccCcccccccccc------ccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhc
Q psy6542 170 SDLGLACDFSKKK---PHASVESDCILHGYIKK------LGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFM 236 (334)
Q Consensus 170 ~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~------~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~ 236 (334)
+|||.|-.+..+. +.+.+|||-|.+||++. ..|....||| ++|||++| .+|||+++....+..|+.
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG-~TPFYadslveTY~KIm~ 295 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYG-ETPFYADSLVETYGKIMN 295 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcC-CCcchHHHHHHHHHHHhc
Confidence 9999998887554 45568999999999842 3378899999 77888665 569999999988887766
Q ss_pred c-cccccccccccHhHHHHHHHhhccCchhhcC
Q psy6542 237 D-QIEEVSQDLITVKGEQCVQLKLTRDTRIVLT 268 (334)
Q Consensus 237 ~-~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~ 268 (334)
. ....+|.+..-......++..+..+|..|++
T Consensus 296 hk~~l~FP~~~~VSeeakdLI~~ll~~~e~RLg 328 (1317)
T KOG0612|consen 296 HKESLSFPDETDVSEEAKDLIEALLCDREVRLG 328 (1317)
T ss_pred hhhhcCCCcccccCHHHHHHHHHHhcChhhhcc
Confidence 6 3445562222113344455555566666776
No 79
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=5.3e-29 Score=237.07 Aligned_cols=186 Identities=16% Similarity=0.179 Sum_probs=143.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+++.||||++..... .......+.+|+++++.++|+|| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~i--------v~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 11 IGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWV--------VKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCe--------eeeEEEEecCCEEEEEEec
Confidence 57888999999999999999999986543 33345578889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... ..+ .+.....++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 83 ~~gg~L~~~l~~~-~~~---~e~~~~~~~~qi~~aL~~LH~~g----------------ivHrDlKp~Nili~~~~~~kL 142 (381)
T cd05626 83 IPGGDMMSLLIRM-EVF---PEVLARFYIAELTLAIESVHKMG----------------FIHRDIKPDNILIDLDGHIKL 142 (381)
T ss_pred CCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeecCCcHHHEEECCCCCEEE
Confidence 9988 43332221 233 33344455669999999999999 999999999999999999999
Q ss_pred EecccccccCCC-------------------------------------------------CCCccccCccccccccc-c
Q psy6542 170 SDLGLACDFSKK-------------------------------------------------KPHASVESDCILHGYIK-K 199 (334)
Q Consensus 170 ~DFGla~~~~~~-------------------------------------------------~~~~~~~t~~~~~~~v~-~ 199 (334)
+|||+++.+... ...+..||+.|++||+. .
T Consensus 143 ~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (381)
T cd05626 143 TDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR 222 (381)
T ss_pred eeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC
Confidence 999998643110 01234689999999984 3
Q ss_pred ccC-Ccceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 200 LGG-PFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 200 ~~~-~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
..+ ..+|+|+ ++|++ .++.+||.+..
T Consensus 223 ~~~~~~~DiwSlG~il~el-ltG~~Pf~~~~ 252 (381)
T cd05626 223 KGYTQLCDWWSVGVILFEM-LVGQPPFLAPT 252 (381)
T ss_pred CCCCCccceeehhhHHHHH-HhCCCCCcCCC
Confidence 334 4566666 45555 55667886654
No 80
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=5.1e-29 Score=231.98 Aligned_cols=228 Identities=15% Similarity=0.126 Sum_probs=161.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCC-cccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEP-FKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~-i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++.+.||+|.++.+++.||||++++... .....+.+..|.+++..++|++ | +++++++.+++.+|+|||
T Consensus 10 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i--------~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 10 KGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFL--------TQLHSCFQTMDRLYFVME 81 (324)
T ss_pred eccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCce--------eeeEEEEEcCCEEEEEEc
Confidence 57788999999999999999999986533 2223446677999999998765 6 889999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ .......++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 82 ~~~~g~L~~~~~~~-~~~---~~~~~~~~~~qi~~al~~lH~~~----------------ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 82 YVNGGDLMYHIQQV-GKF---KEPHAVFYAAEIAIGLFFLHSKG----------------IIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHeEEcCCCCEE
Confidence 99988 43332221 123 33445667789999999999999 99999999999999999999
Q ss_pred EEecccccccC--CCCCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFS--KKKPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~--~~~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++... .......+||+.|++||+.. ..+ ..+|+|+ ++|+++ ++..||.+.+.......+..... .
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-tG~~pf~~~~~~~~~~~i~~~~~-~ 219 (324)
T cd05587 142 IADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQPPFDGEDEDELFQSIMEHNV-S 219 (324)
T ss_pred EeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHcCCC-C
Confidence 99999997542 22234457899999999853 233 4556666 556655 57778876653322222222211 1
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.... ....+.+...+..+|..|++..
T Consensus 220 ~~~~~~-~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 220 YPKSLS-KEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred CCCCCC-HHHHHHHHHHhhcCHHHcCCCC
Confidence 222222 1334556666678999998763
No 81
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=1.7e-28 Score=223.42 Aligned_cols=187 Identities=19% Similarity=0.166 Sum_probs=143.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+|+.||+|.+...... ....+.+..|++++++++|||| +++++++.+++.+|+||||
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--------~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 3 KGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFI--------VNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcE--------EEEEEEEecCCeEEEEEec
Confidence 567889999999999999999999754431 1223345569999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +........ .........+.++.|++.||.|||+.+ |+||||||+||++++++.++|
T Consensus 75 ~~g~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~----------------ivH~dikp~Nili~~~~~~~l 136 (277)
T cd05607 75 MNGGDLKYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSMD----------------IVYRDMKPENVLLDDQGNCRL 136 (277)
T ss_pred CCCCCHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC----------------EEEccCChHhEEEcCCCCEEE
Confidence 9988 433322211 111245555677789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC-CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++........ ....|+..|++||+.. ..+..+|+|+ ++|++++ +..||...
T Consensus 137 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~-g~~p~~~~ 197 (277)
T cd05607 137 SDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA-GRTPFKDH 197 (277)
T ss_pred eeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh-CCCCCCCC
Confidence 99999987655432 2346788999999842 2345677777 5666655 66677554
No 82
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=3.9e-29 Score=232.07 Aligned_cols=228 Identities=18% Similarity=0.156 Sum_probs=161.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.+|+.||||.+++... ..........|..++.. ++|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i--------~~~~~~~~~~~~~~lv~E 76 (316)
T cd05620 5 KGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFL--------THLYCTFQTKEHLFFVME 76 (316)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCc--------cCeeEEEEeCCEEEEEEC
Confidence 56788999999999999999999986432 11223345567777775 589999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 77 ~~~~g~L~~~i~~~-~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------ivHrDlkp~Nil~~~~~~~k 136 (316)
T cd05620 77 FLNGGDLMFHIQDK-GRF---DLYRATFYAAEIVCGLQFLHSKG----------------IIYRDLKLDNVMLDRDGHIK 136 (316)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHeEECCCCCEE
Confidence 99988 43322221 123 34445566779999999999999 99999999999999999999
Q ss_pred EEecccccccC--CCCCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFS--KKKPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~--~~~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++... .......+||..|++||+.. ..+ ..+|+|+ ++|+++ .+..||.+.+.....+.+.... ..
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~-~g~~Pf~~~~~~~~~~~~~~~~-~~ 214 (316)
T cd05620 137 IADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEML-IGQSPFHGDDEDELFESIRVDT-PH 214 (316)
T ss_pred eCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCC-CC
Confidence 99999997532 22234567899999999853 234 4566666 556665 4677887665433333222221 11
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.. ........+...+..||..|++..
T Consensus 215 ~~~~-~~~~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 215 YPRW-ITKESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred CCCC-CCHHHHHHHHHHccCCHHHcCCCh
Confidence 2211 222345566677778999998753
No 83
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=6.4e-29 Score=231.21 Aligned_cols=229 Identities=14% Similarity=0.109 Sum_probs=162.8
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
.+++.+.||+|.++.+++.||||++++... ..........|..++..+. |++| +++++++.+.+.+|+||
T Consensus 9 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i--------~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFL--------TQLHSCFQTMDRLYFVM 80 (323)
T ss_pred eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeE--------eeEEEEEecCCEEEEEE
Confidence 357788999999999999999999986543 2223345566888888775 6777 89999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ +...... ...+ ....+..++.|++.||.|||+++ |+||||||+|||+++++.+
T Consensus 81 E~~~~g~L~~~~~~-~~~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDlkp~Nill~~~~~~ 140 (323)
T cd05616 81 EYVNGGDLMYQIQQ-VGRF---KEPHAVFYAAEIAIGLFFLHSKG----------------IIYRDLKLDNVMLDSEGHI 140 (323)
T ss_pred cCCCCCCHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EEecCCCHHHeEECCCCcE
Confidence 999988 4322222 1223 34455667789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCC--CCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccc
Q psy6542 168 RISDLGLACDFSKK--KPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIE 240 (334)
Q Consensus 168 kl~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 240 (334)
||+|||+++..... .....+||+.|++||+.. ..+ ..+|+|+ ++|+++ ++..||.+.+.......+.....
T Consensus 141 kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-tg~~Pf~~~~~~~~~~~i~~~~~- 218 (323)
T cd05616 141 KIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIMEHNV- 218 (323)
T ss_pred EEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC-
Confidence 99999999854322 234467899999999853 334 4556666 556655 57778876654333333322221
Q ss_pred ccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 241 EVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 241 ~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..+.... ......+...+..+|..|+++.
T Consensus 219 ~~p~~~s-~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 219 AYPKSMS-KEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred CCCCcCC-HHHHHHHHHHcccCHHhcCCCC
Confidence 1222222 2344566667788999999864
No 84
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=1.7e-28 Score=228.90 Aligned_cols=229 Identities=14% Similarity=0.169 Sum_probs=164.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+++.||||++++... +....+.+.+|..++..+ +|||| +++++++.+.+.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i--------~~~~~~~~~~~~~~lv~e 76 (327)
T cd05617 5 RGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFL--------VGLHSCFQTTSRLFLVIE 76 (327)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCE--------eeEEEEEEeCCEEEEEEe
Confidence 57788999999999999999999987543 233445677899999888 69999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ ....+..++.||+.||.|||+++ |+||||||+|||+++++.+|
T Consensus 77 ~~~~~~L~~~~~~~-~~l---~~~~~~~~~~qi~~al~~lH~~~----------------ivHrDlkp~Nili~~~~~~k 136 (327)
T cd05617 77 YVNGGDLMFHMQRQ-RKL---PEEHARFYAAEICIALNFLHERG----------------IIYRDLKLDNVLLDADGHIK 136 (327)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHEEEeCCCCEE
Confidence 99988 43322221 233 44555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCC--CCCCccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCCCCCCc---ccch---h
Q psy6542 169 ISDLGLACDFSK--KKPHASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPESGQSK---PELI---F 235 (334)
Q Consensus 169 l~DFGla~~~~~--~~~~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~~~~---~~~i---~ 235 (334)
|+|||+++.... ......+||+.|++||+.. ..+ ..+|+|+ ++|+++ ++..||........ .+.+ .
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-~g~~pf~~~~~~~~~~~~~~~~~~~ 215 (327)
T cd05617 137 LTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM-AGRSPFDIITDNPDMNTEDYLFQVI 215 (327)
T ss_pred EeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHH-hCCCCCCccCCCcccccHHHHHHHH
Confidence 999999985322 2234467899999999843 334 4566666 556665 46678865432211 1111 1
Q ss_pred cccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 236 MDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.......+.. .+......+...+..||..|+++.
T Consensus 216 ~~~~~~~p~~-~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 216 LEKPIRIPRF-LSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HhCCCCCCCC-CCHHHHHHHHHHhccCHHHcCCCC
Confidence 1111122222 223456677777788999999864
No 85
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=5.3e-29 Score=231.23 Aligned_cols=228 Identities=17% Similarity=0.126 Sum_probs=160.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.+..+++.||||+++.... ..........|..+++. ++|||| +++++++.+++.+|+|||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i--------v~~~~~~~~~~~~~lv~e 76 (316)
T cd05619 5 KGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL--------THLYCTFQTKENLFFVME 76 (316)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcC--------cceEEEEEeCCEEEEEEe
Confidence 56788999999999999999999986532 11122345567777775 599999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 77 y~~~g~L~~~l~~~-~~~---~~~~~~~~~~qi~~al~~LH~~~----------------ivHrdikp~Nil~~~~~~~k 136 (316)
T cd05619 77 YLNGGDLMFHIQSC-HKF---DLPRATFYAAEIICGLQFLHSKG----------------IVYRDLKLDNILLDTDGHIK 136 (316)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEeCCCCHHHEEECCCCCEE
Confidence 99988 43332221 122 34444567789999999999999 99999999999999999999
Q ss_pred EEecccccccCC--CCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSK--KKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~--~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++.... .......||..|++||+.. .. +..+|+|+ ++|+++ .+..||.+.+.....+.+..... .
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~-~G~~pf~~~~~~~~~~~i~~~~~-~ 214 (316)
T cd05619 137 IADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEML-IGQSPFHGHDEEELFQSIRMDNP-C 214 (316)
T ss_pred EccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC-C
Confidence 999999975432 2234456899999999843 23 44566666 556655 56678876553322222222211 1
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.. .+....+.+...+..+|..|++..
T Consensus 215 ~~~~-~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 215 YPRW-LTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred CCcc-CCHHHHHHHHHHhccCHhhcCCCh
Confidence 1211 222344566677788999998764
No 86
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=8.4e-29 Score=230.51 Aligned_cols=227 Identities=17% Similarity=0.193 Sum_probs=160.4
Q ss_pred CCCceEEEecee---CCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSL---KPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~---~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++.+.||+|++ ..+++.||||+++.... .......+.+|+++++.++|||| +++++++..++.+|+
T Consensus 6 ~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--------v~~~~~~~~~~~~~l 77 (323)
T cd05584 6 KGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI--------VDLIYAFQTGGKLYL 77 (323)
T ss_pred ecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCch--------hceeeEEecCCeEEE
Confidence 467778888876 46899999999986432 22233456789999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
||||+.|+ +....... ..+ ....+..++.|++.||.|||+++ |+||||||+|||++.++
T Consensus 78 v~e~~~~~~L~~~~~~~-~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nil~~~~~ 137 (323)
T cd05584 78 ILEYLSGGELFMHLERE-GIF---MEDTACFYLSEISLALEHLHQQG----------------IIYRDLKPENILLDAQG 137 (323)
T ss_pred EEeCCCCchHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHeEECCCC
Confidence 99999998 32222221 122 23344456679999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 166 HVRISDLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
.+||+|||+++...... .....|++.|++||+... ....+|+|+ ++|++ ..+..||.+.......+.+....
T Consensus 138 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el-l~G~~pf~~~~~~~~~~~~~~~~ 216 (323)
T cd05584 138 HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDM-LTGAPPFTAENRKKTIDKILKGK 216 (323)
T ss_pred CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHH-hcCCCCCCCCCHHHHHHHHHcCC
Confidence 99999999997543322 344568999999998532 244677777 55555 55677886655322222222222
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
. ..+.... ....+.+...+..+|..|+..
T Consensus 217 ~-~~~~~~~-~~~~~li~~~l~~~p~~R~~~ 245 (323)
T cd05584 217 L-NLPPYLT-PEARDLLKKLLKRNPSSRLGA 245 (323)
T ss_pred C-CCCCCCC-HHHHHHHHHHcccCHhHcCCC
Confidence 1 2222222 234566777778899999853
No 87
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=3.7e-29 Score=232.25 Aligned_cols=228 Identities=17% Similarity=0.155 Sum_probs=162.6
Q ss_pred CCCceEEEecee---CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSL---KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~---~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+++...||++++ +.+|+.||||++............+..|++++++++|||| +++++++.+++.+|+||
T Consensus 6 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~lv~ 77 (318)
T cd05582 6 QGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI--------VKLHYAFQTEGKLYLIL 77 (318)
T ss_pred eCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCc--------ccEEEEEEcCCEEEEEE
Confidence 356677887765 5789999999998654433334456789999999999999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||+.|+ +...... ...+ ....+..++.||+.||.|||+.+ |+||||||+||++++++.+
T Consensus 78 e~~~~~~L~~~l~~-~~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dlkp~Nil~~~~~~~ 137 (318)
T cd05582 78 DFLRGGDLFTRLSK-EVMF---TEEDVKFYLAELALALDHLHSLG----------------IIYRDLKPENILLDEEGHI 137 (318)
T ss_pred cCCCCCcHHHHHHH-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EecCCCCHHHeEECCCCcE
Confidence 999988 3222221 1122 45556677789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccc
Q psy6542 168 RISDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIE 240 (334)
Q Consensus 168 kl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 240 (334)
||+|||+++...... .....|++.|++||+.. .. ...+|+|+ ++|+++ ++..||.+.+.......+.... .
T Consensus 138 kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-tg~~p~~~~~~~~~~~~i~~~~-~ 215 (318)
T cd05582 138 KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML-TGSLPFQGKDRKETMTMILKAK-L 215 (318)
T ss_pred EEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeec-cCCCCCCCCCHHHHHHHHHcCC-C
Confidence 999999998654432 33456899999999853 23 44677777 556654 5677886654322222222211 1
Q ss_pred ccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 241 EVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 241 ~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..+.... ......+...+..||..|++..
T Consensus 216 ~~p~~~~-~~~~~li~~~l~~~P~~R~~a~ 244 (318)
T cd05582 216 GMPQFLS-PEAQSLLRALFKRNPANRLGAG 244 (318)
T ss_pred CCCCCCC-HHHHHHHHHHhhcCHhHcCCCC
Confidence 1222222 2344566777778999998865
No 88
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=8e-29 Score=233.85 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC------eEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN------SHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~------~~~ 85 (334)
.++...||++.+..+|+.||||.+..........+.+.+|+.+++.++|||| +++++++...+ .+|
T Consensus 31 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~~~~~ 102 (359)
T cd07876 31 SGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI--------ISLLNVFTPQKSLEEFQDVY 102 (359)
T ss_pred cCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCE--------eeeeeeeccCCCccccceeE
Confidence 5677899999999999999999998665444455667789999999999999 99999987443 579
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||||+++++...... .+ ....+..++.|++.||.|||+++ |+||||||+||+++.++
T Consensus 103 lv~e~~~~~l~~~~~~---~~---~~~~~~~~~~qi~~~L~~LH~~~----------------ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 103 LVMELMDANLCQVIHM---EL---DHERMSYLLYQMLCGIKHLHSAG----------------IIHRDLKPSNIVVKSDC 160 (359)
T ss_pred EEEeCCCcCHHHHHhc---cC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHEEECCCC
Confidence 9999999985333221 12 33445567789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCC-CCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKK-PHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.+||+|||+++...... .....||..|++||+.. . ....+|+|+ ++|++ .++.+||.+.+
T Consensus 161 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el-~tg~~pf~~~~ 226 (359)
T cd07876 161 TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL-VKGSVIFQGTD 226 (359)
T ss_pred CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHH-HhCCCCCCCCC
Confidence 99999999998654433 23456789999999853 2 344567777 45555 55677887654
No 89
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=4.7e-29 Score=234.13 Aligned_cols=187 Identities=17% Similarity=0.201 Sum_probs=147.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.+..+|+.||||++++... .......+.+|+++++.++|+|| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 82 (350)
T cd05573 11 RGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI--------VKLYYSFQDEEHLYLVMEY 82 (350)
T ss_pred eCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc--------cchhhheecCCeEEEEEcC
Confidence 57788999999999999999999986543 22344567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.... ..+ .......++.|++.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~~~~L~~~l~~~-~~l---~~~~~~~i~~qi~~aL~~LH~~g----------------iiH~Dlkp~NIll~~~~~~kL 142 (350)
T cd05573 83 MPGGDLMNLLIRK-DVF---PEETARFYIAELVLALDSVHKLG----------------FIHRDIKPDNILIDADGHIKL 142 (350)
T ss_pred CCCCCHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHeEECCCCCEEe
Confidence 9887 43332222 233 44555667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-------------------------------CCccccCcccccccccc--ccCCcceeeh--hHHHH
Q psy6542 170 SDLGLACDFSKKK-------------------------------PHASVESDCILHGYIKK--LGGPFVSAWQ--TRYAK 214 (334)
Q Consensus 170 ~DFGla~~~~~~~-------------------------------~~~~~~t~~~~~~~v~~--~~~~~~~~w~--~~~~~ 214 (334)
+|||++....... .....||+.|++||+.. .....+|+|+ ++++.
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 143 ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 9999998665443 23456889999999843 2345677777 44444
Q ss_pred HcCCCCCCCCCC
Q psy6542 215 LFPNRLELHPES 226 (334)
Q Consensus 215 l~~~~~~~~~~~ 226 (334)
|..+..||.+.+
T Consensus 223 ll~g~~Pf~~~~ 234 (350)
T cd05573 223 MLYGFPPFYSDT 234 (350)
T ss_pred hccCCCCCCCCC
Confidence 556777887665
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=5.1e-28 Score=225.99 Aligned_cols=185 Identities=14% Similarity=0.177 Sum_probs=147.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||++.++.+|..||+|.+..... ......+.+|+++++.++|||| +++++++..++.+|+||||
T Consensus 14 g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 14 GAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYI--------VGFYGAFYSDGEISICMEH 84 (331)
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCC--------CeEEEEEEECCEEEEEeec
Confidence 457888999999999999999999986433 3345678889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSA-LNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|+ +..+.... ..+ ....+..++.|++.||.|||++ + |+||||||+|||+++++.+|
T Consensus 85 ~~~~~L~~~l~~~-~~~---~~~~~~~~~~~i~~~l~~lH~~~~----------------ivH~dlkp~Nil~~~~~~~k 144 (331)
T cd06649 85 MDGGSLDQVLKEA-KRI---PEEILGKVSIAVLRGLAYLREKHQ----------------IMHRDVKPSNILVNSRGEIK 144 (331)
T ss_pred CCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHhhcCC----------------EEcCCCChhhEEEcCCCcEE
Confidence 9988 54443322 122 4455667778999999999985 5 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+|||++............|+..|++||+... .+..+|+|+ ++|+++ .+..||...
T Consensus 145 l~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-tg~~p~~~~ 205 (331)
T cd06649 145 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA-IGRYPIPPP 205 (331)
T ss_pred EccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCC
Confidence 99999998776655556678999999998532 344567777 556654 566677543
No 91
>KOG0577|consensus
Probab=99.96 E-value=6.5e-30 Score=241.45 Aligned_cols=229 Identities=15% Similarity=0.047 Sum_probs=171.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
-||++-||-|++..+.+.||||.+..... ....-+.+..|+..|++++|||+ |.+.++|-.....|+||||
T Consensus 36 HGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt--------ieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 36 HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT--------IEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred CCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc--------ccccceeeccchHHHHHHH
Confidence 47889999999999999999999986544 22233467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|-|. .|.+--++ +.+ .+-.+..|+.+.+.||.|||+.+ .||||||.-|||+++.|.|||
T Consensus 108 ClGSAsDlleVhk-Kpl---qEvEIAAi~~gaL~gLaYLHS~~----------------~IHRDiKAGNILLse~g~VKL 167 (948)
T KOG0577|consen 108 CLGSASDLLEVHK-KPL---QEVEIAAITHGALQGLAYLHSHN----------------RIHRDIKAGNILLSEPGLVKL 167 (948)
T ss_pred HhccHHHHHHHHh-ccc---hHHHHHHHHHHHHHHHHHHHHhh----------------HHhhhccccceEecCCCeeee
Confidence 9999 55443332 233 34445667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCccccccccc-----cccCCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIK-----KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~-----~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||.|....+ .++++|||++|+|||. ..+..+.|+|+ +.-..++-..+|.+.-+..++.--|......++
T Consensus 168 aDFGSAsi~~P--AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL 245 (948)
T KOG0577|consen 168 ADFGSASIMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL 245 (948)
T ss_pred ccccchhhcCc--hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC
Confidence 99999976554 4578999999999982 23355778888 333455777778766654433222333333344
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...-|...=..++..++.+-|..|.+++
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse 273 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSE 273 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHH
Confidence 4444443334566777777777777765
No 92
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=9.6e-29 Score=230.14 Aligned_cols=227 Identities=17% Similarity=0.150 Sum_probs=160.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHH---HhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIF---NHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il---~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+++.+.||+|.+..+|+.||||++++... .....+.+.+|.+++ +.++|||| +++++++.+++.+|+|
T Consensus 9 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i--------~~~~~~~~~~~~~~lv 80 (324)
T cd05589 9 RGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFL--------VNLFACFQTEDHVCFV 80 (324)
T ss_pred ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCCh--------hceeeEEEcCCEEEEE
Confidence 47788999999999999999999986532 222334556666654 56789999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||++|+ +...... ..+ .......++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 81 ~E~~~~~~L~~~~~~--~~l---~~~~~~~~~~qi~~al~~lH~~~----------------ivHrdlkp~Nill~~~~~ 139 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVF---SEPRAVFYAACVVLGLQYLHENK----------------IVYRDLKLDNLLLDTEGF 139 (324)
T ss_pred EcCCCCCcHHHHhhc--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEecCCCHHHeEECCCCc
Confidence 9999998 4332221 123 44455667789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCC--CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccc
Q psy6542 167 VRISDLGLACDFSKK--KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQI 239 (334)
Q Consensus 167 vkl~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 239 (334)
+||+|||+++..... .....+|++.|++||+.. .. ...+|+|+ ++|+++ .+..||.+.+.......+.....
T Consensus 140 ~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~G~~pf~~~~~~~~~~~i~~~~~ 218 (324)
T cd05589 140 VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML-VGESPFPGDDEEEVFDSIVNDEV 218 (324)
T ss_pred EEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC
Confidence 999999998754322 233467899999999853 23 34566666 556665 56678766543222222222211
Q ss_pred cccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 240 EEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
. .+... +......+..++..||..|++..
T Consensus 219 ~-~p~~~-~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 219 R-YPRFL-SREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred C-CCCCC-CHHHHHHHHHHhhcCHhHcCCCC
Confidence 1 22122 22345677777788999998643
No 93
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=9.5e-29 Score=230.19 Aligned_cols=228 Identities=14% Similarity=0.120 Sum_probs=162.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCC-CCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRN-EPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h-~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|.++.+|+.||||++++... .....+.+..|..+++.+.| ++| +++++++.+.+.+|+|||
T Consensus 10 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i--------~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 10 KGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFL--------TQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCch--------hheeeEEecCCEEEEEEc
Confidence 47788999999999999999999986533 22233456778999988876 456 789999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +....... ..+ .....+.++.|++.||.|||+++ |+||||||+|||+++++.+|
T Consensus 82 y~~~g~L~~~i~~~-~~l---~~~~~~~i~~qi~~al~~lH~~~----------------ivHrDikp~Nill~~~~~ik 141 (323)
T cd05615 82 YVNGGDLMYHIQQV-GKF---KEPQAVFYAAEISVGLFFLHRRG----------------IIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred CCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHeEECCCCCEE
Confidence 99988 43332221 223 44555677789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++...... .....||+.|++||+.. .. +..+|+|+ ++|+++ ++.+||.+.+.....+.+..... .
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell-tG~~pf~~~~~~~~~~~i~~~~~-~ 219 (323)
T cd05615 142 IADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDEDELFQSIMEHNV-S 219 (323)
T ss_pred EeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCC-C
Confidence 99999998643322 33456899999999853 23 34566666 556655 57778876653323333322222 1
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.... ....+.+...+..+|..|++..
T Consensus 220 ~p~~~~-~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 220 YPKSLS-KEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCccCC-HHHHHHHHHHcccCHhhCCCCC
Confidence 222222 2344566666788999999864
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=7.9e-29 Score=231.10 Aligned_cols=188 Identities=16% Similarity=0.201 Sum_probs=146.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+|+.||||+++.... .....+.+.+|+.+++.++|+|| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 82 (330)
T cd05601 11 RGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWI--------PQLQYAFQDKDNLYLVMEY 82 (330)
T ss_pred eccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC--------cceeeEEecCCeEEEEECC
Confidence 56778999999999999999999986543 33345567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.......+ ....+..++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 83 ~~~~~L~~~l~~~~~~l---~~~~~~~~~~qi~~aL~~lH~~~----------------i~H~Dlkp~NIll~~~~~~kL 143 (330)
T cd05601 83 QPGGDLLSLLNRYEDQF---DEDMAQFYLAELVLAIHSVHQMG----------------YVHRDIKPENVLIDRTGHIKL 143 (330)
T ss_pred CCCCCHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEcccCchHheEECCCCCEEe
Confidence 9888 444433322233 34445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC---CccccCcccccccccc-------cc-CCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP---HASVESDCILHGYIKK-------LG-GPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 170 ~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~-------~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
+|||++........ ....||+.|++||+.. .. +..+|+|+ ++|++ ..+..||...+.
T Consensus 144 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el-~~g~~Pf~~~~~ 214 (330)
T cd05601 144 ADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM-IYGRSPFHEGTS 214 (330)
T ss_pred ccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeee-ccCCCCCCCCCH
Confidence 99999987654432 2346889999999843 22 34567777 45555 556778866543
No 95
>KOG0662|consensus
Probab=99.96 E-value=3.9e-29 Score=205.50 Aligned_cols=187 Identities=18% Similarity=0.158 Sum_probs=152.1
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+--+-|++|++++|++.||+|.++.+..++.+-....+|+.+++.++|.|| |+++++...++.+-+|+|||+
T Consensus 13 gtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkni--------vrl~dvlhsdkkltlvfe~cd 84 (292)
T KOG0662|consen 13 GTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--------VRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_pred CcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcce--------eehhhhhccCceeEEeHHHhh
Confidence 445689999999999999999999988877777778889999999999999 999999999999999999999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
.++.....+-.+.. ..+.+..++.|++.||.|+|+++ ++||||||+|.||+.+|.+|++||
T Consensus 85 qdlkkyfdslng~~---d~~~~rsfmlqllrgl~fchshn----------------vlhrdlkpqnllin~ngelkladf 145 (292)
T KOG0662|consen 85 QDLKKYFDSLNGDL---DPEIVRSFMLQLLRGLGFCHSHN----------------VLHRDLKPQNLLINRNGELKLADF 145 (292)
T ss_pred HHHHHHHHhcCCcC---CHHHHHHHHHHHHhhhhhhhhhh----------------hhhccCCcceEEeccCCcEEeccc
Confidence 98544434333344 34444555669999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCc--cccCcccccccc---ccccCCcceeeh--hHHHHHc-CCCCCCCCCC
Q psy6542 173 GLACDFSKKKPHA--SVESDCILHGYI---KKLGGPFVSAWQ--TRYAKLF-PNRLELHPES 226 (334)
Q Consensus 173 Gla~~~~~~~~~~--~~~t~~~~~~~v---~~~~~~~~~~w~--~~~~~l~-~~~~~~~~~~ 226 (334)
|+|+.++-....- -.-|.+|.||.+ .+.+.+.-|+|+ |+++.+. .+++-|.|.+
T Consensus 146 glarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d 207 (292)
T KOG0662|consen 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_pred chhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence 9999988775332 234788999998 456677778888 7776665 4555444443
No 96
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=2.3e-28 Score=230.31 Aligned_cols=179 Identities=15% Similarity=0.141 Sum_probs=141.2
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||+|.+..+|+.||||++..... ....+.+.+|+++++.++|+|| +++++++..++.+|+||||
T Consensus 83 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 83 GSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNV--------VKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred cCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCc--------ceeeeEeccCCeEEEEEec
Confidence 457788999999999999999999975443 3345678899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +... .......+..++.||+.||.|||+++ |+||||||+|||+++++.+||
T Consensus 154 ~~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~~----------------ivHrDlkp~NIll~~~~~~kL 209 (353)
T PLN00034 154 MDGGSLEGT--------HIADEQFLADVARQILSGIAYLHRRH----------------IVHRDIKPSNLLINSAKNVKI 209 (353)
T ss_pred CCCCccccc--------ccCCHHHHHHHHHHHHHHHHHHHHCC----------------EeecCCCHHHEEEcCCCCEEE
Confidence 9998 3211 11133445667889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCccccccccccc------c-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKKL------G-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~------~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+|||+++.+.... .....|+..|++||+... . ...+|+|+ ++|+++ .+..||.
T Consensus 210 ~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~-~g~~pf~ 274 (353)
T PLN00034 210 ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY-LGRFPFG 274 (353)
T ss_pred cccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH-hCCCCCC
Confidence 9999998765432 234568999999997421 1 22566666 556655 4556664
No 97
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=2e-28 Score=229.09 Aligned_cols=244 Identities=16% Similarity=0.063 Sum_probs=165.2
Q ss_pred CCCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecC-Ce
Q psy6542 11 SRVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEP-NS 83 (334)
Q Consensus 11 ~~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~-~~ 83 (334)
..++...||+|.+ ..++..||||+++...... ..+.+.+|+.+++.+ +|||| +++++++... +.
T Consensus 16 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~~h~ni--------v~~~~~~~~~~~~ 86 (338)
T cd05102 16 GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATAS-EHKALMSELKILIHIGNHLNV--------VNLLGACTKPNGP 86 (338)
T ss_pred ccCCcceEEEEEEeccCCcccchhhheeccccccchH-HHHHHHHHHHHHHHhccCcce--------eeEEeEecCCCCc
Confidence 4678889999974 3556789999998544322 345678899999999 89999 9999988754 56
Q ss_pred EEEEEEccCCC-h-hHHhhhhhhh--------------------------------------------------------
Q psy6542 84 HYIIGVRQSGP-K-DQISRSKINR-------------------------------------------------------- 105 (334)
Q Consensus 84 ~~ivmEy~~g~-l-~~l~~~~~~~-------------------------------------------------------- 105 (334)
+|+||||++|| + +++.......
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 89999999998 4 3332211000
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC-
Q psy6542 106 -YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 183 (334)
Q Consensus 106 -~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~- 183 (334)
........++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~----------------ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~ 230 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASRK----------------CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 230 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC----------------EECCCCccceEEEcCCCcEEEeecccccccccCcch
Confidence 011234456677889999999999999 99999999999999999999999999986543322
Q ss_pred ---CccccCccccccccc-ccc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccccccccccHhHHHHH
Q psy6542 184 ---HASVESDCILHGYIK-KLG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCV 255 (334)
Q Consensus 184 ---~~~~~t~~~~~~~v~-~~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i 255 (334)
....++..|++||+. ... +..+|+|+ ++|+++..+..||.+.... +. +
T Consensus 231 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~---~~---------------------~ 286 (338)
T cd05102 231 VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN---EE---------------------F 286 (338)
T ss_pred hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc---HH---------------------H
Confidence 122345779999974 333 44566666 7778877677787553311 00 0
Q ss_pred HHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHHHh
Q psy6542 256 QLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMARKA 311 (334)
Q Consensus 256 ~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~~~ 311 (334)
...+..... .. .....++.+.+ +...|...+|..|| +.++++.+.+..
T Consensus 287 ~~~~~~~~~--~~----~~~~~~~~l~~--li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 287 CQRLKDGTR--MR----APENATPEIYR--IMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHhcCCC--CC----CCCCCCHHHHH--HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001101000 00 01223334445 77778888888888 888888777643
No 98
>KOG0599|consensus
Probab=99.96 E-value=1.2e-29 Score=220.45 Aligned_cols=228 Identities=18% Similarity=0.149 Sum_probs=166.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc------chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH------ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~------~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
|+.+--|-.+-+++||+.+|+|++..... .........+|++||+++ .||+| +++.|+|+++..+
T Consensus 27 rgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~I--------I~l~D~yes~sF~ 98 (411)
T KOG0599|consen 27 RGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYI--------IDLQDVYESDAFV 98 (411)
T ss_pred ccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcE--------EEeeeeccCcchh
Confidence 34445567788899999999999976543 233445667899999997 69999 9999999999999
Q ss_pred EEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 85 YIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 85 ~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
++|+|.|+-| +|++... -.+ +++....++.|+..|++|||.++ |+||||||+|||++
T Consensus 99 FlVFdl~prGELFDyLts~--Vtl---SEK~tR~iMrqlfegVeylHa~~----------------IVHRDLKpENILld 157 (411)
T KOG0599|consen 99 FLVFDLMPRGELFDYLTSK--VTL---SEKETRRIMRQLFEGVEYLHARN----------------IVHRDLKPENILLD 157 (411)
T ss_pred hhhhhhcccchHHHHhhhh--eee---cHHHHHHHHHHHHHHHHHHHHhh----------------hhhcccChhheeec
Confidence 9999999988 5555332 234 34444566679999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCCC-CccccCccccccccc-------cccCC-cceeeh---hHHHHHcCCCCCCCCCCCCCc
Q psy6542 163 EHGHVRISDLGLACDFSKKKP-HASVESDCILHGYIK-------KLGGP-FVSAWQ---TRYAKLFPNRLELHPESGQSK 230 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~-------~~~~~-~~~~w~---~~~~~l~~~~~~~~~~~~~~~ 230 (334)
++.++||+|||+|+.+..+.. ...||||.|++||.. ..||. ..|.|+ ++|.++++..+.|+... .-.
T Consensus 158 dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-mlM 236 (411)
T KOG0599|consen 158 DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-MLM 236 (411)
T ss_pred cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-HHH
Confidence 999999999999998888764 457999999999972 23455 456666 56666665554433322 111
Q ss_pred ccchhcccccccccccccH---hHHHHHHHhhccCchhhcCCC
Q psy6542 231 PELIFMDQIEEVSQDLITV---KGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~p~~r~~~~ 270 (334)
...|+. .-+.+.+..|.. ..++.|...+.-||..|++..
T Consensus 237 LR~Ime-GkyqF~speWadis~~~KdLIsrlLqVdp~~Ritak 278 (411)
T KOG0599|consen 237 LRMIME-GKYQFRSPEWADISATVKDLISRLLQVDPTKRITAK 278 (411)
T ss_pred HHHHHh-cccccCCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence 112222 223344444443 456677788888999998864
No 99
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=1.2e-28 Score=228.93 Aligned_cols=227 Identities=15% Similarity=0.144 Sum_probs=162.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|.++.+++.||||++++... .......+..|.++++.+ +|||| +++++++.+.+.+|+|||
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i--------~~~~~~~~~~~~~~lv~e 76 (318)
T cd05570 5 KGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL--------TQLHSCFQTKDRLFFVME 76 (318)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCc--------cceeeEEEcCCEEEEEEc
Confidence 46778999999999999999999986543 222334566788899887 69999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +....... ..+ .......++.|++.||.|||+.+ |+||||||+||++++++.+|
T Consensus 77 ~~~~~~L~~~~~~~-~~l---~~~~~~~~~~qi~~~l~~LH~~~----------------ivH~dlkp~Nill~~~~~~k 136 (318)
T cd05570 77 YVNGGDLMFHIQRS-GRF---DEPRARFYAAEIVLGLQFLHERG----------------IIYRDLKLDNVLLDSEGHIK 136 (318)
T ss_pred CCCCCCHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEccCCCHHHeEECCCCcEE
Confidence 99988 43332221 223 44555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCCC--CCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 169 ISDLGLACDFSKK--KPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 169 l~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
|+|||+++..... .....+|++.|++||+.. ..+..+|+|+ ++|++ ..+..||.+.+.......+..... .
T Consensus 137 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l-~~G~~pf~~~~~~~~~~~i~~~~~-~ 214 (318)
T cd05570 137 IADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEM-LAGQSPFEGDDEDELFQSILEDEV-R 214 (318)
T ss_pred ecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHH-hhCCCCCCCCCHHHHHHHHHcCCC-C
Confidence 9999999753222 233456899999999853 2345677777 55555 456778876653322222222221 1
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
.+.. .+....+.+...+..||..|++.
T Consensus 215 ~~~~-~~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 215 YPRW-LSKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred CCCc-CCHHHHHHHHHHccCCHHHcCCC
Confidence 2211 12234456666667889999886
No 100
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.4e-28 Score=235.00 Aligned_cols=175 Identities=14% Similarity=0.046 Sum_probs=137.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..+++.||||... ...+.+|+++++.++|||| +++++++..+...++||||+
T Consensus 102 ~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnI--------v~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 102 PGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSI--------IQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCC--------CCEeEEEEECCeeEEEEecC
Confidence 5788899999999999999999654 2345679999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.+++....... ..+ ....++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 166 ~~~L~~~l~~~-~~l---~~~~~~~i~~qi~~aL~ylH~~~----------------IvHrDiKP~NIll~~~~~vkL~D 225 (391)
T PHA03212 166 KTDLYCYLAAK-RNI---AICDILAIERSVLRAIQYLHENR----------------IIHRDIKAENIFINHPGDVCLGD 225 (391)
T ss_pred CCCHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCChHhEEEcCCCCEEEEe
Confidence 88743322221 122 34456677889999999999999 99999999999999999999999
Q ss_pred cccccccCCC---CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCC
Q psy6542 172 LGLACDFSKK---KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 172 FGla~~~~~~---~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
||+|+..... ......||+.|++||+.. .. +..+|+|+ ++|+++.+..+.|
T Consensus 226 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 226 FGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred CCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 9999753322 223457899999999853 23 44566666 6677766555433
No 101
>KOG0604|consensus
Probab=99.96 E-value=2.9e-29 Score=220.55 Aligned_cols=223 Identities=14% Similarity=0.071 Sum_probs=162.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeec----CCeEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSE----PNSHYII 87 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~----~~~~~iv 87 (334)
+..++|-.|.++.||+.+|+|++. ......+|+++.=+. .|||| |.+.++|+. ...+.||
T Consensus 73 GinGkV~~C~~k~T~ekfALKvL~-------Ds~KARrEVeLHw~~s~h~~i--------V~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 73 GINGKVVQCVHKRTQEKFALKVLL-------DSPKARREVELHWMASGHPHI--------VSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred ccCCceEEEEeccchhhhHHHHHh-------cCHHHHhHhhhhhhhcCCCce--------EEeehhhhhhccCceeeEee
Confidence 456799999999999999999998 233445689885554 69999 999999873 3568999
Q ss_pred EEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-
Q psy6542 88 GVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH- 164 (334)
Q Consensus 88 mEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~- 164 (334)
||+++|| +..+..+....|.+ +.+..|+.||+.|+.|||+.+ |.||||||+|+|....
T Consensus 138 mE~meGGeLfsriq~~g~~afTE---rea~eI~~qI~~Av~~lH~~n----------------IAHRDlKpENLLyt~t~ 198 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDRGDQAFTE---REASEIMKQIGLAVRYLHSMN----------------IAHRDLKPENLLYTTTS 198 (400)
T ss_pred eecccchHHHHHHHHcccccchH---HHHHHHHHHHHHHHHHHHhcc----------------hhhccCChhheeeecCC
Confidence 9999999 55555554445644 444556669999999999999 9999999999999654
Q ss_pred --CCEEEEecccccccCCCC-CCccccCccccccccc-cccCCccee-eh--hHHHHHcCCCCCCCCCCCCCc-ccc---
Q psy6542 165 --GHVRISDLGLACDFSKKK-PHASVESDCILHGYIK-KLGGPFVSA-WQ--TRYAKLFPNRLELHPESGQSK-PEL--- 233 (334)
Q Consensus 165 --~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~-~~~~~~~~~-w~--~~~~~l~~~~~~~~~~~~~~~-~~~--- 233 (334)
..+||+|||+|+...... ..+.|-||+|.+||++ ...|..+.| |+ ++.+.+.++-+||++...... ++.
T Consensus 199 ~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~r 278 (400)
T KOG0604|consen 199 PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRR 278 (400)
T ss_pred CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhH
Confidence 569999999998766433 4556678889999885 344666655 44 555556677778888765432 322
Q ss_pred hhcccccccccccccH---hHHHHHHHhhccCchhhcCCC
Q psy6542 234 IFMDQIEEVSQDLITV---KGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 234 i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~p~~r~~~~ 270 (334)
|.. ..+++|..-|+. ..++.|...+..+|..|++-.
T Consensus 279 I~~-gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~ 317 (400)
T KOG0604|consen 279 IRT-GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIE 317 (400)
T ss_pred hhc-cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHH
Confidence 222 334566666655 234456666677999999854
No 102
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=1.1e-28 Score=234.13 Aligned_cols=187 Identities=17% Similarity=0.152 Sum_probs=144.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-----eEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN-----SHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~-----~~~i 86 (334)
+++...||++.+..+|+.||||.+..........+.+.+|+++++.++|+|| +++++++...+ .+|+
T Consensus 10 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 10 YGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV--------LSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred eCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCc--------CCHhheecCCCccccceEEE
Confidence 5778899999999999999999997654443445678889999999999999 99999998776 7999
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||||+.+++....... ..+ ....+..++.||+.||.|||+.+ ++||||||+|||+++++.
T Consensus 82 v~e~~~~~l~~~~~~~-~~l---~~~~~~~~~~qi~~aL~~LH~~~----------------ivH~dlkp~Nili~~~~~ 141 (372)
T cd07853 82 VTELMQSDLHKIIVSP-QPL---SSDHVKVFLYQILRGLKYLHSAG----------------ILHRDIKPGNLLVNSNCV 141 (372)
T ss_pred EeeccccCHHHHHhcC-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeCCCCChHHEEECCCCC
Confidence 9999998853332221 122 44556677789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC---CccccCccccccccccc--c-CCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP---HASVESDCILHGYIKKL--G-GPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~~--~-~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
+||+|||+++....... ....++..|++||+... . ...+|+|+ ++++.|.++.+||.+.+
T Consensus 142 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 142 LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred EEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 99999999986543322 22356888999997532 2 34566666 44444456777887665
No 103
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=1e-28 Score=232.77 Aligned_cols=185 Identities=17% Similarity=0.125 Sum_probs=143.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~ 84 (334)
.+++...||+|.+..+++.||||.+..........+.+.+|+.+++.++|||| +++++++... ..+
T Consensus 26 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~~~~ 97 (355)
T cd07874 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI--------ISLLNVFTPQKSLEEFQDV 97 (355)
T ss_pred eecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCch--------hceeeeeecccccccccee
Confidence 35778899999999999999999998765544455677789999999999999 9999988643 357
Q ss_pred EEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 85 YIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
|+||||+++++...... .+ ....+..++.|++.||.|||+++ |+||||||+|||++++
T Consensus 98 ~lv~e~~~~~l~~~~~~---~l---~~~~~~~~~~qi~~aL~~LH~~g----------------ivHrDikp~Nill~~~ 155 (355)
T cd07874 98 YLVMELMDANLCQVIQM---EL---DHERMSYLLYQMLCGIKHLHSAG----------------IIHRDLKPSNIVVKSD 155 (355)
T ss_pred EEEhhhhcccHHHHHhh---cC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCChHHEEECCC
Confidence 99999999985332222 12 34445667789999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCC-CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKP-HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.+||+|||+++....... ....||..|++||+.. .. ...+|+|+ ++|++ ..+..||.+.+
T Consensus 156 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el-~~g~~pf~~~~ 222 (355)
T cd07874 156 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM-VRHKILFPGRD 222 (355)
T ss_pred CCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHH-HhCCCCCCCCC
Confidence 9999999999987655432 3456789999999843 23 44566677 45555 55666776654
No 104
>KOG0584|consensus
Probab=99.96 E-value=1.2e-29 Score=241.87 Aligned_cols=182 Identities=15% Similarity=0.121 Sum_probs=152.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe--EEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS--HYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~--~~iv 87 (334)
||.+=.||+|.+..+|..||--.++-... .....++|..|+.+|+.|+|||| |++|+++.+... +-+|
T Consensus 50 rGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NI--------irfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 50 RGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNI--------IRFYDSWVDTDNKTINFI 121 (632)
T ss_pred cccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCce--------eeeeeheecCCCceeeee
Confidence 66677999999999999998766654443 44456789999999999999999 999999997655 8889
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-C
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH-G 165 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~-~ 165 (334)
+|++.+| +.... +++.....+.+..|+.||+.||.|||++. |||||||||.+||+|+.+ |
T Consensus 122 TEL~TSGtLr~Y~----kk~~~vn~kaik~W~RQILkGL~yLHs~~--------------PPIIHRDLKCDNIFinG~~G 183 (632)
T KOG0584|consen 122 TELFTSGTLREYR----KKHRRVNIKAIKSWCRQILKGLVYLHSQD--------------PPIIHRDLKCDNIFVNGNLG 183 (632)
T ss_pred eecccCCcHHHHH----HHhccCCHHHHHHHHHHHHHHhhhhhcCC--------------CCccccccccceEEEcCCcC
Confidence 9999888 42221 22233356677899999999999999998 889999999999999876 9
Q ss_pred CEEEEecccccccCCCCCCccccCccccccccccccCCcceeeh----hHHHHHcCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHASVESDCILHGYIKKLGGPFVSAWQ----TRYAKLFPNR 219 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~~~~~~~~w~----~~~~~l~~~~ 219 (334)
.|||+|+|||+...........|||.+|+||+....|....|++ |+.||.+++-
T Consensus 184 ~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eY 241 (632)
T KOG0584|consen 184 EVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEY 241 (632)
T ss_pred ceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccC
Confidence 99999999999999998888999999999999998888777776 8888866554
No 105
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=5.1e-28 Score=221.08 Aligned_cols=188 Identities=17% Similarity=0.160 Sum_probs=145.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.+..+++.||||.+...... ......+.+|+.+++.++|||| +++++.+.+++.+|+||||
T Consensus 10 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 10 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV--------VSLAYAYETKDALCLVLTL 81 (285)
T ss_pred cCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCE--------eeeeeeecCCCeEEEEEec
Confidence 567789999999999999999999865432 2233456789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +......... .......+..++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nil~~~~~~~~l 143 (285)
T cd05605 82 MNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHRER----------------IVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred cCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHHCC----------------cEecCCCHHHEEECCCCCEEE
Confidence 9988 4433222111 12245556677789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC-CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....|+..|++||+.. .. +..+|+|+ ++|+++. +..||.+..
T Consensus 144 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~-g~~pf~~~~ 205 (285)
T cd05605 144 SDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE-GKSPFRQRK 205 (285)
T ss_pred eeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH-CCCCCCCCc
Confidence 99999987644332 3456789999999843 22 34566666 5666655 667887654
No 106
>KOG0986|consensus
Probab=99.96 E-value=2.4e-29 Score=231.56 Aligned_cols=232 Identities=19% Similarity=0.216 Sum_probs=175.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
-|++.+.|+-+..+.||+.+|.|.+.+.+.. ..-.....+|-+||.+++.+.| |.+-.+|++.+.+|+||.
T Consensus 194 GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~Fi--------VslaYAfeTkd~LClVLt 265 (591)
T KOG0986|consen 194 GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFI--------VSLAYAFETKDALCLVLT 265 (591)
T ss_pred ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcE--------EEEeeeecCCCceEEEEE
Confidence 3788999999999999999999999877652 2233355689999999999988 999999999999999999
Q ss_pred ccCCC-hhH-HhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 90 RQSGP-KDQ-ISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 90 y~~g~-l~~-l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
.|+|| +.+ |.......+++ ..++.++.||+.||++||..+ ||.|||||+|||+|++|+|
T Consensus 266 lMNGGDLkfHiyn~g~~gF~e---~ra~FYAAEi~cGLehlH~~~----------------iVYRDLKPeNILLDd~Ghv 326 (591)
T KOG0986|consen 266 LMNGGDLKFHIYNHGNPGFDE---QRARFYAAEIICGLEHLHRRR----------------IVYRDLKPENILLDDHGHV 326 (591)
T ss_pred eecCCceeEEeeccCCCCCch---HHHHHHHHHHHhhHHHHHhcc----------------eeeccCChhheeeccCCCe
Confidence 99999 322 22222235544 444555669999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCCCcc-ccCcccccccccc-ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcc-cc--hhcccc
Q psy6542 168 RISDLGLACDFSKKKPHAS-VESDCILHGYIKK-LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKP-EL--IFMDQI 239 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~-~~t~~~~~~~v~~-~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~-~~--i~~~~~ 239 (334)
+|+|+|||..+..+.+... .||..||+|||.. ..|+++.||| |+.+.|.-++.||.....-... ++ .+....
T Consensus 327 RISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~ 406 (591)
T KOG0986|consen 327 RISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP 406 (591)
T ss_pred EeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch
Confidence 9999999999999888766 8999999999954 4499999999 4444445556677554322222 11 122222
Q ss_pred cccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 240 EEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
-..+..|++ ..+......+.+||..|++|.
T Consensus 407 ~ey~~kFS~-eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 407 EEYSDKFSE-EAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hhcccccCH-HHHHHHHHHHccCHHHhccCC
Confidence 223345553 344445556688999999996
No 107
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96 E-value=3.7e-28 Score=226.95 Aligned_cols=187 Identities=18% Similarity=0.184 Sum_probs=145.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+++.||||++.+... .....+.+.+|..+++.++|+|| +++++++.+++.+|+||||
T Consensus 11 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 82 (331)
T cd05597 11 RGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI--------TNLHYAFQDENNLYLVMDY 82 (331)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC--------CceEEEEecCCeEEEEEec
Confidence 57778999999999999999999985432 33344567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.......+ ....+..++.||+.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~g~~L~~~l~~~~~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nill~~~~~~kl 143 (331)
T cd05597 83 YVGGDLLTLLSKFEDRL---PEDMARFYLAEMVLAIDSVHQLG----------------YVHRDIKPDNVLLDKNGHIRL 143 (331)
T ss_pred CCCCcHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eEECCCCHHHEEECCCCCEEE
Confidence 9888 443333222233 33445566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC---CccccCcccccccccc------c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP---HASVESDCILHGYIKK------L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~------~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++..+..... ....||+.|++||+.. . .+..+|+|+ ++|+++ .+..||.+.+
T Consensus 144 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~-~g~~Pf~~~~ 212 (331)
T cd05597 144 ADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML-YGETPFYAES 212 (331)
T ss_pred EECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh-hCCCCCCCCC
Confidence 99999986654332 2246899999999853 1 234567777 555655 5677887655
No 108
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.9e-28 Score=239.34 Aligned_cols=233 Identities=13% Similarity=0.050 Sum_probs=163.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC--------e
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN--------S 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~--------~ 83 (334)
+++...||+|.+..+|+.||||++............+.+|+.++..++|+|+ +++++.+...+ .
T Consensus 42 ~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~i--------v~~~~~~~~~~~~~~~~~~~ 113 (496)
T PTZ00283 42 SGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSI--------VKCHEDFAKKDPRNPENVLM 113 (496)
T ss_pred cCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcE--------EEeecceecccccCcccceE
Confidence 4677899999999999999999998766554555678889999999999999 88887765322 3
Q ss_pred EEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 84 HYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
+++||||+.|| +..................+..++.|++.||.|||+++ |+||||||+|||++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~----------------IiHrDLKP~NILl~ 177 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH----------------MIHRDIKSANILLC 177 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------EecCCCCHHHEEEe
Confidence 78999999988 43333322222223355566777889999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCC----CCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccc
Q psy6542 163 EHGHVRISDLGLACDFSKK----KPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPEL 233 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~----~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~ 233 (334)
+++.+||+|||+++.+... .....+||+.|++||+... .+..+|+|+ ++|+++. +..||.+.+.......
T Consensus 178 ~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt-G~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 178 SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT-LKRPFDGENMEEVMHK 256 (496)
T ss_pred CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHH
Confidence 9999999999999865432 2344678999999998543 244566677 5566655 6668866543222222
Q ss_pred hhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 234 IFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
+........+.... ..-...+...+..+|..|++..
T Consensus 257 ~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~RPs~~ 292 (496)
T PTZ00283 257 TLAGRYDPLPPSIS-PEMQEIVTALLSSDPKRRPSSS 292 (496)
T ss_pred HhcCCCCCCCCCCC-HHHHHHHHHHcccChhhCcCHH
Confidence 22222222222222 1334455556667888877643
No 109
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=5.9e-28 Score=225.39 Aligned_cols=228 Identities=15% Similarity=0.174 Sum_probs=159.2
Q ss_pred CCCceEEEecee---CCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSL---KPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~---~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
+++...||++++ ..+|+.||+|++.+... .....+.+..|+++++.++ |++| +++++++..++.+|
T Consensus 10 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i--------~~~~~~~~~~~~~~ 81 (332)
T cd05614 10 TGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL--------VTLHYAFQTEAKLH 81 (332)
T ss_pred ecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCc--------ccEEEEEecCCEEE
Confidence 466677887765 46899999999986432 2223456778999999995 8999 99999999999999
Q ss_pred EEEEccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 86 IIGVRQSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 86 ivmEy~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+||||+.|+ + +.+... ..+ ....+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 82 lv~e~~~~g~L~~~l~~~--~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------ivHrDlkp~Nili~~ 140 (332)
T cd05614 82 LILDYVSGGEMFTHLYQR--DNF---SEDEVRFYSGEIILALEHLHKLG----------------IVYRDIKLENILLDS 140 (332)
T ss_pred EEEeCCCCCcHHHHHHHc--CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------cEecCCCHHHeEECC
Confidence 999999998 4 333222 123 34455667789999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCC---CCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccch
Q psy6542 164 HGHVRISDLGLACDFSKKK---PHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELI 234 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i 234 (334)
++.+||+|||+++...... .....||..|++||+... . +..+|+|+ ++|++ .++..||...........+
T Consensus 141 ~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el-ltg~~pf~~~~~~~~~~~~ 219 (332)
T cd05614 141 EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFEL-LTGASPFTLEGERNTQSEV 219 (332)
T ss_pred CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhh-hcCCCCCCCCCCCCCHHHH
Confidence 9999999999998654332 234578999999998532 2 34567777 55555 5566677654432222111
Q ss_pred hcc---cccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 235 FMD---QIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 235 ~~~---~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
... .....+. ..+......+..++..||..|++..
T Consensus 220 ~~~~~~~~~~~~~-~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 220 SRRILKCDPPFPS-FIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred HHHHhcCCCCCCC-CCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 111 1111111 1222345667777788999998643
No 110
>PHA02988 hypothetical protein; Provisional
Probab=99.96 E-value=3.4e-28 Score=222.36 Aligned_cols=235 Identities=8% Similarity=0.014 Sum_probs=165.7
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec----CCeEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE----PNSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~----~~~~~ 85 (334)
..++.+.||+|.. +|+.||||.++.... .....+.+.+|+.+|++++|||| +++++++.+ ...++
T Consensus 29 ~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI--------v~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 29 KENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNI--------LKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCE--------EEEeeeEEecccCCCceE
Confidence 3678899999987 689999999987644 33345678899999999999999 999999876 35789
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSA-LNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+||||++|| +..+.... ..+ .....+.++.|++.||.|||+. + ++||||||+|||+++
T Consensus 99 lv~Ey~~~g~L~~~l~~~-~~~---~~~~~~~i~~~i~~~l~~lH~~~~----------------~~Hrdlkp~nill~~ 158 (283)
T PHA02988 99 LILEYCTRGYLREVLDKE-KDL---SFKTKLDMAIDCCKGLYNLYKYTN----------------KPYKNLTSVSFLVTE 158 (283)
T ss_pred EEEEeCCCCcHHHHHhhC-CCC---ChhHHHHHHHHHHHHHHHHHhcCC----------------CCCCcCChhhEEECC
Confidence 999999998 54443322 122 3445567788999999999984 6 889999999999999
Q ss_pred CCCEEEEecccccccCCCCCCccccCcccccccccc----ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhc
Q psy6542 164 HGHVRISDLGLACDFSKKKPHASVESDCILHGYIKK----LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFM 236 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~----~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~ 236 (334)
++.+||+|||+++..... .....++..|++||+.. ..+..+|+|+ ++|++++ +..||.+.+.....
T Consensus 159 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~-g~~Pf~~~~~~~~~----- 231 (283)
T PHA02988 159 NYKLKIICHGLEKILSSP-PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT-GKIPFENLTTKEIY----- 231 (283)
T ss_pred CCcEEEcccchHhhhccc-cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH-CCCCCCCCCHHHHH-----
Confidence 999999999999866543 23455788999999853 2344666677 6677666 56676543211000
Q ss_pred ccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 237 DQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
..+. ..... . . .....++.+.+ +...|.+.+|..|| +.++++.+..
T Consensus 232 ----------------~~i~---~~~~~--~--~--~~~~~~~~l~~--li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 232 ----------------DLII---NKNNS--L--K--LPLDCPLEIKC--IVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred ----------------HHHH---hcCCC--C--C--CCCcCcHHHHH--HHHHHhcCCcccCcCHHHHHHHHHH
Confidence 0000 11100 0 0 01133445555 66777777888888 8888877765
No 111
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=2.7e-28 Score=225.41 Aligned_cols=186 Identities=16% Similarity=0.103 Sum_probs=142.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.++.+++.||||.++...... ....+.+|+++++.++|||| +++++++..++..|+||||+
T Consensus 16 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 86 (309)
T cd07872 16 EGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANI--------VTLHDIVHTDKSLTLVFEYL 86 (309)
T ss_pred ccCCEEEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCc--------ceEEEEEeeCCeEEEEEeCC
Confidence 4677899999999999999999998654422 23346679999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
++++..........+ ....+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|
T Consensus 87 ~~~l~~~~~~~~~~~---~~~~~~~~~~qi~~aL~~lH~~~----------------ivH~dlkp~Nill~~~~~~kl~D 147 (309)
T cd07872 87 DKDLKQYMDDCGNIM---SMHNVKIFLYQILRGLAYCHRRK----------------VLHRDLKPQNLLINERGELKLAD 147 (309)
T ss_pred CCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEECc
Confidence 988433322221122 34445567779999999999999 99999999999999999999999
Q ss_pred cccccccCCCC--CCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKK--PHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~--~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
||+++...... .....++..|++||+... ....+|+|+ ++|+++ ++.+||.+.+
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-tg~~pf~~~~ 209 (309)
T cd07872 148 FGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMA-SGRPLFPGST 209 (309)
T ss_pred cccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 99998654332 223456889999997432 234566676 555554 5667876654
No 112
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=4.9e-28 Score=228.89 Aligned_cols=185 Identities=17% Similarity=0.112 Sum_probs=143.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ 85 (334)
+++.+.||+|.+..+++.||||.+..........+.+.+|+.+++.++|||| +++++++... ..+|
T Consensus 34 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------i~~~~~~~~~~~~~~~~~~~ 105 (364)
T cd07875 34 SGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI--------IGLLNVFTPQKSLEEFQDVY 105 (364)
T ss_pred cCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCc--------cccceeecccccccccCeEE
Confidence 5777899999999999999999998655444445667789999999999999 9999887643 3579
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||||+++++...... .+ ....+..++.|++.||.|||+++ |+||||||+||+++.++
T Consensus 106 lv~e~~~~~l~~~~~~---~~---~~~~~~~~~~qi~~aL~~LH~~~----------------ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 106 IVMELMDANLCQVIQM---EL---DHERMSYLLYQMLCGIKHLHSAG----------------IIHRDLKPSNIVVKSDC 163 (364)
T ss_pred EEEeCCCCCHHHHHHh---cC---CHHHHHHHHHHHHHHHHHHhhCC----------------eecCCCCHHHEEECCCC
Confidence 9999999985333222 12 33445667789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCC-CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKP-HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
.+||+|||+++....... ....+|..|++||+.. .. ...+|+|+ ++|++ ..+..||.+.+.
T Consensus 164 ~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el-l~g~~pf~~~~~ 230 (364)
T cd07875 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM-IKGGVLFPGTDH 230 (364)
T ss_pred cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHH-HhCCCCCCCCCH
Confidence 999999999987655432 3456789999999843 23 44567777 55555 556678876653
No 113
>KOG0608|consensus
Probab=99.96 E-value=2.2e-28 Score=232.71 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=167.7
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
-++.|.++....|...||+|.|++... ...-..+...|-+||....++-| |++|..|++.+.+|+||||+.
T Consensus 641 AFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WV--------VrLyySFQDkdnLYFVMdYIP 712 (1034)
T KOG0608|consen 641 AFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWV--------VRLYYSFQDKDNLYFVMDYIP 712 (1034)
T ss_pred ccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcce--------EEEEEEeccCCceEEEEeccC
Confidence 467999999999999999999997654 22233467789999999999999 999999999999999999999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
||.-.-+.-+.+-|.+..+.+++. ++..|+++.|..| +|||||||+|||||.+|++||+||
T Consensus 713 GGDmMSLLIrmgIFeE~LARFYIA---EltcAiesVHkmG----------------FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 713 GGDMMSLLIRMGIFEEDLARFYIA---ELTCAIESVHKMG----------------FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred CccHHHHHHHhccCHHHHHHHHHH---HHHHHHHHHHhcc----------------ceecccCccceEEccCCceeeeec
Confidence 993222233344565555555554 9999999999999 999999999999999999999999
Q ss_pred ccccccC--CC------------------------------------------CCCccccCcccccccc-ccccCCccee
Q psy6542 173 GLACDFS--KK------------------------------------------KPHASVESDCILHGYI-KKLGGPFVSA 207 (334)
Q Consensus 173 Gla~~~~--~~------------------------------------------~~~~~~~t~~~~~~~v-~~~~~~~~~~ 207 (334)
|||.-+. .+ ..+...||+.|++||| .+.||+...|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9997440 00 0134578999999998 5788999999
Q ss_pred eh----hHHHHHcCCCCCCCCCCCCCc-ccchhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 208 WQ----TRYAKLFPNRLELHPESGQSK-PELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 208 w~----~~~~~l~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
|| ++|+|++ +++||........ ..++-+.....++..-........++..+-.++..|++..
T Consensus 854 wws~gvil~em~~-g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkn 920 (1034)
T KOG0608|consen 854 WWSVGVILYEMLV-GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKN 920 (1034)
T ss_pred hhHhhHHHHHHhh-CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhccc
Confidence 99 6777766 5668877664433 3344444444333222211222223344455677777654
No 114
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=2.7e-27 Score=221.32 Aligned_cols=184 Identities=14% Similarity=0.175 Sum_probs=144.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.++.+|..||+|.+..... ......+.+|+++++.++|+|| +++++++.+++.+|+||||+
T Consensus 15 ~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 15 AGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYI--------VGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred CCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcc--------cceeEEEEECCEEEEEEecC
Confidence 46778999999999999999999886533 2344568889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSA-LNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.|+ +..+.... ... ....+..++.|++.||.|||+. + ++||||||+|||+++++.+||
T Consensus 86 ~~~~L~~~l~~~-~~~---~~~~~~~~~~~l~~~l~~lH~~~~----------------ivH~dlkp~Nili~~~~~~kL 145 (333)
T cd06650 86 DGGSLDQVLKKA-GRI---PEQILGKVSIAVIKGLTYLREKHK----------------IMHRDVKPSNILVNSRGEIKL 145 (333)
T ss_pred CCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhcCC----------------EEecCCChhhEEEcCCCCEEE
Confidence 987 54433321 122 4455567778999999999974 6 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++............|+..|++||+... .+..+|+|+ ++|+++ .+..||...
T Consensus 146 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~-~g~~p~~~~ 205 (333)
T cd06650 146 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA-IGRYPIPPP 205 (333)
T ss_pred eeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCc
Confidence 9999998765554555678899999998532 244566666 555655 456676544
No 115
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=2.7e-28 Score=222.51 Aligned_cols=188 Identities=16% Similarity=0.141 Sum_probs=140.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc---CCCCcccccccceeeEEEEeec-----CCe
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL---RNEPFKKCVLLFKMNLYKVTSE-----PNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l---~h~~i~~~~~~~~v~~~~~~~~-----~~~ 83 (334)
+++.+.||+|.++.+|+.||||.++.............+|+++++.+ +|||| +++++++.. ...
T Consensus 10 ~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni--------~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 10 VGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNI--------VRLMDVCATSRTDRETK 81 (288)
T ss_pred ecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCe--------eeeeeeeccccCCCCce
Confidence 57788999999999999999999986544333333455677777665 79999 999998764 345
Q ss_pred EEEEEEccCCChhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 84 HYIIGVRQSGPKDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 84 ~~ivmEy~~g~l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
+++||||+.+++..+... ....+ ....+..++.|++.||.|||+++ ++||||||+||+++
T Consensus 82 ~~lv~e~~~~~l~~~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~~~----------------ivH~dikp~Nili~ 142 (288)
T cd07863 82 VTLVFEHVDQDLRTYLDKVPPPGL---PAETIKDLMRQFLRGLDFLHANC----------------IVHRDLKPENILVT 142 (288)
T ss_pred EEEEEcccccCHHHHHHhcCCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEC
Confidence 899999999884333222 21122 45556677889999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCCC-CccccCcccccccccc-c-cCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 163 EHGHVRISDLGLACDFSKKKP-HASVESDCILHGYIKK-L-GGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~-~-~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
+++.+||+|||+++....... ....++..|++||+.. . ....+|+|+ ++.+.+.++.++|.+..
T Consensus 143 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~ 211 (288)
T cd07863 143 SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 211 (288)
T ss_pred CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence 999999999999987654432 3346788999999853 2 245667777 44444457777775543
No 116
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=8.1e-28 Score=224.66 Aligned_cols=188 Identities=17% Similarity=0.161 Sum_probs=145.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||++.++.+++.||||++.+... .......+.+|..++..++|++| +++++++.+++.+|+||||
T Consensus 11 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~l~~~~~~~~~~~lv~Ey 82 (331)
T cd05624 11 RGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWI--------TTLHYAFQDENYLYLVMDY 82 (331)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCE--------eeEEEEEEcCCEEEEEEeC
Confidence 57788999999999999999999986432 23334457789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|| +..+.......+ .......++.|++.||.|||+++ |+||||||+|||++.++.+||
T Consensus 83 ~~gg~L~~~l~~~~~~l---~~~~~~~~~~qi~~~L~~lH~~~----------------iiHrDlkp~Nill~~~~~~kl 143 (331)
T cd05624 83 YVGGDLLTLLSKFEDRL---PEDMARFYIAEMVLAIHSIHQLH----------------YVHRDIKPDNVLLDMNGHIRL 143 (331)
T ss_pred CCCCcHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeeccCchHHEEEcCCCCEEE
Confidence 9988 544433322233 33344556779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC---CccccCccccccccccc-------cCCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP---HASVESDCILHGYIKKL-------GGPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 170 ~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~~-------~~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
+|||++........ ....|++.|++||+... ....+|+|+ ++|++ .++..||.+.+.
T Consensus 144 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el-l~g~~Pf~~~~~ 213 (331)
T cd05624 144 ADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM-LYGETPFYAESL 213 (331)
T ss_pred EeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh-hhCCCCccCCCH
Confidence 99999987654432 23468999999998532 234567777 55555 556778876653
No 117
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=9.7e-28 Score=232.57 Aligned_cols=185 Identities=14% Similarity=0.070 Sum_probs=137.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--------CCe
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--------PNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--------~~~ 83 (334)
+|+.+.||+|.+..+++.||||.+..... ...+|+.+++.++|||| |++++++.. ...
T Consensus 76 ~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~ni--------v~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 76 NGSFGVVYEAICIDTSEKVAIKKVLQDPQ------YKNRELLIMKNLNHINI--------IFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHhcCCCCC--------cceeeeEeecccccCCCceE
Confidence 57788999999999999999998864322 23469999999999999 998887642 235
Q ss_pred EEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 84 HYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 84 ~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+++||||+++++..+...............+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~----------------IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF----------------ICHRDLKPQNLLIDP 205 (440)
T ss_pred EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------EecCCcCHHHEEEcC
Confidence 7899999999843322221111122345556677789999999999999 999999999999997
Q ss_pred CC-CEEEEecccccccCCCC-CCccccCcccccccccc--ccC-Ccceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 164 HG-HVRISDLGLACDFSKKK-PHASVESDCILHGYIKK--LGG-PFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 164 ~~-~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~--~~~-~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
++ .+||+|||+|+.+.... .....||+.|++||+.. ..+ ..+|+|+ ++|++ .++.+||.+.+.
T Consensus 206 ~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el-ltG~~pf~~~~~ 276 (440)
T PTZ00036 206 NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEM-ILGYPIFSGQSS 276 (440)
T ss_pred CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCCh
Confidence 65 69999999998765433 33456789999999742 234 4566666 55555 556778877653
No 118
>KOG0695|consensus
Probab=99.95 E-value=1.3e-28 Score=219.52 Aligned_cols=230 Identities=15% Similarity=0.191 Sum_probs=180.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
|+|--+|.+++.+.|.+.+|+|++++.-. ++..-.+.+.|-.++.+. +||.+ |-++..|++..++++|.|
T Consensus 260 rgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pfl--------vglhscfqtesrlffvie 331 (593)
T KOG0695|consen 260 RGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFL--------VGLHSCFQTESRLFFVIE 331 (593)
T ss_pred CcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeE--------EehhhhhcccceEEEEEE
Confidence 56667999999999999999999997644 444556788898888775 58888 999999999999999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|++||.-.++..+-+.+++..+.++- .+|+.||+|||++| ||.||||.+|+|++..|++||
T Consensus 332 yv~ggdlmfhmqrqrklpeeharfys---~ei~lal~flh~rg----------------iiyrdlkldnvlldaeghikl 392 (593)
T KOG0695|consen 332 YVNGGDLMFHMQRQRKLPEEHARFYS---AEICLALNFLHERG----------------IIYRDLKLDNVLLDAEGHIKL 392 (593)
T ss_pred EecCcceeeehhhhhcCcHHHhhhhh---HHHHHHHHHHhhcC----------------eeeeeccccceEEccCCceee
Confidence 99999444444444556555555544 49999999999999 999999999999999999999
Q ss_pred EecccccccCCC--CCCccccCcccccccccc-ccCCcceeeh----hHHHHHcCCCCCCCCCC--------CCCcccch
Q psy6542 170 SDLGLACDFSKK--KPHASVESDCILHGYIKK-LGGPFVSAWQ----TRYAKLFPNRLELHPES--------GQSKPELI 234 (334)
Q Consensus 170 ~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~-~~~~~~~~w~----~~~~~l~~~~~~~~~~~--------~~~~~~~i 234 (334)
+|+|.|+.-... .+.++||||.|.+||++. ..|.++.||| +++|||++.. ||..-. .++.+++|
T Consensus 393 tdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrs-pfdivgm~n~d~ntedylfqvi 471 (593)
T KOG0695|consen 393 TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS-PFDIVGMDNPDMNTEDYLFQVI 471 (593)
T ss_pred cccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCC-CcceecCCCcccchhHHHHHHH
Confidence 999999854333 356789999999999864 5599999999 6788877655 664332 22355666
Q ss_pred hcccccccccccccHhHHHHHHHhhccCchhhcCCCc
Q psy6542 235 FMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPV 271 (334)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~ 271 (334)
+-.++. +|..++ +++...+...+.+||..|++|..
T Consensus 472 lekqir-iprsls-vkas~vlkgflnkdp~erlgc~~ 506 (593)
T KOG0695|consen 472 LEKQIR-IPRSLS-VKASHVLKGFLNKDPKERLGCRP 506 (593)
T ss_pred hhhccc-ccceee-hhhHHHHHHhhcCCcHHhcCCCc
Confidence 555554 554444 35667788888999999999983
No 119
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=5.8e-28 Score=222.24 Aligned_cols=186 Identities=18% Similarity=0.130 Sum_probs=143.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|.++.+++.||||.++...... ....+.+|+.+++.++|||| +++++++.+++.+|+||||+
T Consensus 16 ~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nI--------~~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 16 EGTYATVYKGRSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANI--------VTLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred cCcCEEEEEEEEcCCCcEEEEEEEecccccC-chhHHHHHHHHHHhcCCCCc--------ceEEEEEecCCeEEEEEecc
Confidence 4677899999999999999999998654322 23356679999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
++++..........+ ....+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|
T Consensus 87 ~~~l~~~l~~~~~~~---~~~~~~~~~~qi~~aL~~lH~~~----------------i~H~dlkp~Nil~~~~~~~kl~d 147 (301)
T cd07873 87 DKDLKQYLDDCGNSI---NMHNVKLFLFQLLRGLNYCHRRK----------------VLHRDLKPQNLLINERGELKLAD 147 (301)
T ss_pred ccCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeCCCCCHHHEEECCCCcEEECc
Confidence 988543333222222 34556677789999999999999 99999999999999999999999
Q ss_pred cccccccCCCCC--CccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKKP--HASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
||++........ ....++..|++||+... . ...+|+|+ ++|+++ ++.+||.+.+
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~-tg~~~f~~~~ 209 (301)
T cd07873 148 FGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMS-TGRPLFPGST 209 (301)
T ss_pred CcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 999986543322 23456788999997432 2 33566666 556654 5677876554
No 120
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=6.9e-28 Score=219.35 Aligned_cols=189 Identities=19% Similarity=0.154 Sum_probs=145.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++...||+|.++.+|+.||||.++....+....+.+.+|+.+++.++|||+ +++++++.+++.+|+||||
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 9 GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI--------VCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred cccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCE--------eeeEEEEeeCCeEEEEEec
Confidence 34677899999999999999999998655444344567789999999999999 9999999999999999999
Q ss_pred cCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.+++ +.+..... ........++.++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 81 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~----------------i~H~dl~p~nil~~~~~~~~l 142 (285)
T cd07861 81 LSMDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSRR----------------VLHRDLKPQNLLIDNKGVIKL 142 (285)
T ss_pred CCCCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhCC----------------eeecCCCHHHEEEcCCCcEEE
Confidence 99874 33322111 112245556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....+++.|++||+.. . ....+|+|+ ++|+++ ++.+||.+..
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~-tg~~~~~~~~ 206 (285)
T cd07861 143 ADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMA-TKKPLFHGDS 206 (285)
T ss_pred CcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHH-HCCCCCCCCC
Confidence 99999986543322 2234578899999742 2 244677777 555555 4567776544
No 121
>KOG1187|consensus
Probab=99.95 E-value=1.1e-27 Score=225.30 Aligned_cols=181 Identities=15% Similarity=0.088 Sum_probs=143.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-eEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN-SHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~-~~~ivmEy 90 (334)
+++.+.||++..... +.||||.+....... .+.|.+|++++.+++|||+ |+++++|.+.+ ..++|+||
T Consensus 85 ~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nl--------v~LlGyC~e~~~~~~LVYEy 153 (361)
T KOG1187|consen 85 EGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNL--------VKLLGYCLEGGEHRLLVYEY 153 (361)
T ss_pred cCCCeEEEEEEECCC-CEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCc--------ccEEEEEecCCceEEEEEEc
Confidence 467889999998874 899999877655432 3459999999999999999 99999999988 49999999
Q ss_pred cCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.+| + +++.... .. ......-+.|+.+++.||.|||+.. .||||||||||+|||+|.+...|
T Consensus 154 m~nGsL~d~L~~~~-~~--~L~W~~R~kIa~g~A~gL~yLH~~~-------------~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 154 MPNGSLEDHLHGKK-GE--PLDWETRLKIALGAARGLAYLHEGC-------------PPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred cCCCCHHHHhCCCC-CC--CCCHHHHHHHHHHHHHHHHHHccCC-------------CCCEecCCCCHHHeeECCCCCEE
Confidence 9988 5 4443322 21 3366677889999999999999975 46799999999999999999999
Q ss_pred EEecccccccCC-CCCCc-c-ccCccccccccccc--cCCcceeeh---hHHHHHcCCC
Q psy6542 169 ISDLGLACDFSK-KKPHA-S-VESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNR 219 (334)
Q Consensus 169 l~DFGla~~~~~-~~~~~-~-~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~ 219 (334)
|+|||+|+.... ..... . .||..|++||.... -+.++|+++ ++.|++.+..
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~ 276 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRK 276 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCc
Confidence 999999976654 33222 2 78999999987543 356788888 5557766553
No 122
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=2.7e-27 Score=218.04 Aligned_cols=188 Identities=13% Similarity=0.085 Sum_probs=138.1
Q ss_pred CCCceEEEeceeC----------------CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEE
Q psy6542 12 RVSKWRVKPPSLK----------------PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLY 75 (334)
Q Consensus 12 ~~~~~~V~~a~~~----------------~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~ 75 (334)
+++...||+|.+. .++..||||.++.... ....+.+.+|++++++++|||| ++++
T Consensus 15 ~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni--------v~~~ 85 (304)
T cd05096 15 EGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNI--------IRLL 85 (304)
T ss_pred ccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCe--------eEEE
Confidence 5788899998753 3445799999986543 2345578889999999999999 9999
Q ss_pred EEeecCCeEEEEEEccCCC-hhHHhhh-hhh--------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhh
Q psy6542 76 KVTSEPNSHYIIGVRQSGP-KDQISRS-KIN--------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIA 139 (334)
Q Consensus 76 ~~~~~~~~~~ivmEy~~g~-l~~l~~~-~~~--------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~ 139 (334)
+++.+.+..|+||||+.++ +..+... ... ..........+.++.||+.||.|||+.+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~------- 158 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN------- 158 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-------
Confidence 9999999999999999887 4333222 110 0111234556778889999999999999
Q ss_pred hhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-c-cCCcceeeh---h
Q psy6542 140 IFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-L-GGPFVSAWQ---T 210 (334)
Q Consensus 140 ~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~ 210 (334)
|+||||||+|||+++++.+||+|||+++.+..... ....++..|++||+.. . .++.+|+|+ +
T Consensus 159 ---------ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 229 (304)
T cd05096 159 ---------FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT 229 (304)
T ss_pred ---------ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence 99999999999999999999999999986644322 1223467789999743 2 244566666 6
Q ss_pred HHHHHcC-CCCCCCC
Q psy6542 211 RYAKLFP-NRLELHP 224 (334)
Q Consensus 211 ~~~~l~~-~~~~~~~ 224 (334)
+|+++.. +..||..
T Consensus 230 l~el~~~~~~~p~~~ 244 (304)
T cd05096 230 LWEILMLCKEQPYGE 244 (304)
T ss_pred HHHHHHccCCCCCCc
Confidence 6776643 4455543
No 123
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=3.6e-28 Score=221.27 Aligned_cols=187 Identities=17% Similarity=0.120 Sum_probs=145.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||+|.++.+|+.||+|.++...........+.+|+++++.++|||+ +++++++.+.+.+|+||||+
T Consensus 10 ~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 10 EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--------VRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCe--------eeHHHHhccCCceEEEEecC
Confidence 4677899999999999999999998655443344567789999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
++++.......... .....++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|
T Consensus 82 ~~~l~~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~~~----------------i~H~dl~~~nil~~~~~~~~l~d 142 (284)
T cd07839 82 DQDLKKYFDSCNGD---IDPEIVKSFMFQLLKGLAFCHSHN----------------VLHRDLKPQNLLINKNGELKLAD 142 (284)
T ss_pred CCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------EecCCCCHHHEEEcCCCcEEECc
Confidence 98843332221122 355566777889999999999999 99999999999999999999999
Q ss_pred cccccccCCCCC--CccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 172 LGLACDFSKKKP--HASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 172 FGla~~~~~~~~--~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
||+++....... ....++..|++||+... ....+|+|+ ++|+++.++.+++.+.
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~ 204 (284)
T cd07839 143 FGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 204 (284)
T ss_pred cchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 999986654322 23346788999997422 245667777 6777777666555443
No 124
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=1.5e-27 Score=222.33 Aligned_cols=186 Identities=12% Similarity=0.084 Sum_probs=142.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
++.+.||++.++.+|+.||||.+............+.+|+++++.++|||| +++++++.+++.+|+||||++
T Consensus 11 ~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpni--------v~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 11 EDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNI--------VPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred cceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCe--------eeEEEEEEECCEEEEEEeccC
Confidence 367899999999999999999998766555566678889999999999999 999999999999999999999
Q ss_pred CC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 93 GP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 93 g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
++ + +.+.......+ ....+..++.|++.||.|||+++ |+||||||+|||++.++.++++
T Consensus 83 ~~~l~~~~~~~~~~~l---~~~~~~~i~~qi~~~L~~LH~~~----------------iiH~dlkp~Nil~~~~~~~~l~ 143 (327)
T cd08227 83 YGSAKDLICTHFMDGM---SELAIAYILQGVLKALDYIHHMG----------------YVHRSVKASHILISVDGKVYLS 143 (327)
T ss_pred CCcHHHHHHhhccCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EecCCCChhhEEEecCCcEEEc
Confidence 88 4 33332222223 44555677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC---------CCccccCccccccccccc---cC-Ccceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK---------PHASVESDCILHGYIKKL---GG-PFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~---------~~~~~~t~~~~~~~v~~~---~~-~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||.+....... .....++..|++||+... .+ ..+|+|+ ++|++ ..+..||...+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el-~~g~~pf~~~~ 214 (327)
T cd08227 144 GLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACEL-ANGHVPFKDMP 214 (327)
T ss_pred ccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHH-HHCCCCCCCcc
Confidence 998765432211 112345667899998532 23 4566666 55555 45666776543
No 125
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.95 E-value=4e-28 Score=227.51 Aligned_cols=184 Identities=18% Similarity=0.170 Sum_probs=142.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ 85 (334)
+++...||+|.+..+++.||||.+..........+.+.+|+++++.++|||| +++++++... ..+|
T Consensus 25 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07878 25 SGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV--------IGLLDVFTPATSIENFNEVY 96 (343)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCch--------hhhhhhhcccccccccCcEE
Confidence 5678899999999999999999998654433344567789999999999999 9998887643 4579
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
++||++.+.+..+.... .+ ....+..++.|++.||.|||+++ |+||||||+||++++++
T Consensus 97 ~~~~~~~~~l~~~~~~~--~l---~~~~~~~i~~qi~~aL~~LH~~~----------------ivHrdikp~Nil~~~~~ 155 (343)
T cd07878 97 LVTNLMGADLNNIVKCQ--KL---SDEHVQFLIYQLLRGLKYIHSAG----------------IIHRDLKPSNVAVNEDC 155 (343)
T ss_pred EEeecCCCCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecccCChhhEEECCCC
Confidence 99999977765543321 23 44556677789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.+||+|||+++..... .....||..|++||+... ....+|+|+ ++|++ ..+..||.+..
T Consensus 156 ~~kl~Dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el-~~g~~pf~~~~ 220 (343)
T cd07878 156 ELRILDFGLARQADDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL-LKGKALFPGND 220 (343)
T ss_pred CEEEcCCccceecCCC-cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHH-HHCCCCCCCCC
Confidence 9999999999876543 334568899999998532 234566676 45555 45666775543
No 126
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=4.7e-27 Score=213.63 Aligned_cols=186 Identities=14% Similarity=0.158 Sum_probs=139.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHH-HHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEI-FNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~i-l~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||++.++.+|+.||||.++......... .+..|..+ ++.++|||+ +++++++..++.+|++|||
T Consensus 11 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~i--------v~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 11 RGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQK-RLLMDLDISMRSVDCPYT--------VTFYGALFREGDVWICMEV 81 (283)
T ss_pred ccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHH-HHHHHHHHHHHHcCCCCe--------eeeeEEEecCCcEEEEhhh
Confidence 4677799999999999999999998765433222 34445554 677899999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSA-LNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|++..+...............++.++.|++.||.|||++ + ++||||||+||+++.++.+||
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~----------------i~h~dlkp~nil~~~~~~~kl 145 (283)
T cd06617 82 MDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS----------------VIHRDVKPSNVLINRNGQVKL 145 (283)
T ss_pred hcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----------------eecCCCCHHHEEECCCCCEEE
Confidence 99885444333222222335666778888999999999997 7 999999999999999999999
Q ss_pred EecccccccCCCCCC-ccccCcccccccccc-----cc-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPH-ASVESDCILHGYIKK-----LG-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 170 ~DFGla~~~~~~~~~-~~~~t~~~~~~~v~~-----~~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+|||+++........ ...++..|++||+.. .. +..+|.|+ ++|+++. +..||.
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~ 208 (283)
T cd06617 146 CDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT-GRFPYD 208 (283)
T ss_pred eecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh-CCCCCC
Confidence 999999876544322 245778899999742 22 34566666 5556554 566663
No 127
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95 E-value=2.6e-27 Score=225.11 Aligned_cols=242 Identities=11% Similarity=0.010 Sum_probs=166.4
Q ss_pred CCCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeE
Q psy6542 11 SRVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
-+++...||+|.. ..++..||||+++...... ..+.+.+|+++++.+ +|||| +++++++.+++..
T Consensus 44 G~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~~Ei~il~~l~~HpnI--------v~l~~~~~~~~~~ 114 (375)
T cd05104 44 GAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLT-EREALMSELKVLSYLGNHINI--------VNLLGACTVGGPT 114 (375)
T ss_pred cCCccceEEEEEEeccccCccceeEEEEeccCCcCcH-HHHHHHHHHHHHHHhcCCcce--------eeeeeeeccCCcc
Confidence 3677889998863 5678899999997554322 345678899999999 89999 9999999999999
Q ss_pred EEEEEccCCC-h-hHHhhhhhhh---------------------------------------------------------
Q psy6542 85 YIIGVRQSGP-K-DQISRSKINR--------------------------------------------------------- 105 (334)
Q Consensus 85 ~ivmEy~~g~-l-~~l~~~~~~~--------------------------------------------------------- 105 (334)
|+|||||+|| + +++.......
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999998 3 3443211000
Q ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 106 -------------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 106 -------------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
........++.++.||+.||.|||+++ |+||||||+|||+++++.+||+||
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~Dlkp~Nill~~~~~~kl~Df 258 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN----------------CIHRDLAARNILLTHGRITKICDF 258 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCchhhEEEECCCcEEEecC
Confidence 001234556778889999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCc----cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 173 GLACDFSKKKPHA----SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 173 Gla~~~~~~~~~~----~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|+++......... ..++..|++||+.. .. +..+|+|+ ++|+++..+..||.......
T Consensus 259 G~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------------- 324 (375)
T cd05104 259 GLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------------- 324 (375)
T ss_pred ccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--------------
Confidence 9998665443221 22345689999843 23 44566666 77787776777764432110
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
++...+...- +.. .....+.++.+ +..+|...+|..|| +.++++.+.+
T Consensus 325 ----------~~~~~~~~~~--~~~----~~~~~~~~l~~--li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 325 ----------KFYKMIKEGY--RML----SPECAPSEMYD--IMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----------HHHHHHHhCc--cCC----CCCCCCHHHHH--HHHHHccCChhHCcCHHHHHHHHHh
Confidence 0111111000 000 00112233344 88888889999999 8888888765
No 128
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=2.6e-27 Score=225.00 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=139.6
Q ss_pred CCCceEEEeceeCCC-----CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSLKPL-----GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~-----~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
+++...||+|.+..+ +..||||.++...... ....+.+|+++++.+ +|+|| |++++++.+++.+|
T Consensus 48 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~il~~l~~h~nI--------v~~~~~~~~~~~~~ 118 (374)
T cd05106 48 AGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD-EREALMSELKILSHLGQHKNI--------VNLLGACTHGGPVL 118 (374)
T ss_pred CCCcccEEEEEEecCCcccccceeEEEeccCCCCHH-HHHHHHHHHHHHHhhccCCce--------eeEeeEecCCCCeE
Confidence 567789999886544 4579999998655432 345677899999999 89999 99999999999999
Q ss_pred EEEEccCCC-h-hHHhhhhhh-----------------------------------------------------------
Q psy6542 86 IIGVRQSGP-K-DQISRSKIN----------------------------------------------------------- 104 (334)
Q Consensus 86 ivmEy~~g~-l-~~l~~~~~~----------------------------------------------------------- 104 (334)
+|||||.+| + +++......
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 999999988 3 333221100
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccccc
Q psy6542 105 ------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDF 178 (334)
Q Consensus 105 ------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~ 178 (334)
.........++.++.|++.||.|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g----------------iiHrDLkp~Nil~~~~~~~kL~DfGla~~~ 262 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN----------------CIHRDVAARNVLLTDGRVAKICDFGLARDI 262 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC----------------EEeccCchheEEEeCCCeEEEeeceeeeec
Confidence 0001234556788899999999999999 999999999999999999999999999866
Q ss_pred CCCCCCc----cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 179 SKKKPHA----SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 179 ~~~~~~~----~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
....... ..++..|++||+.. .. +..+|+|+ ++|+++..+..||..
T Consensus 263 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 263 MNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred cCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 5443222 22345689999742 33 44556666 667777667777654
No 129
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=5.5e-27 Score=214.25 Aligned_cols=188 Identities=17% Similarity=0.156 Sum_probs=143.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||++.+..+++.||+|.+..... .......+.+|+++++.++|+|+ +.+++.+..++.+|++|||
T Consensus 10 ~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i--------~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 10 KGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFV--------VNLAYAYETKDALCLVLTI 81 (285)
T ss_pred cCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCc--------eeEEEEEecCCEEEEEEEe
Confidence 36678999999999999999999986543 22233456779999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +........ ........+..++.|++.||.|||+.+ |+||||||+||++++++.++|
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~----------------iiH~dikp~Nili~~~~~~kl 143 (285)
T cd05632 82 MNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHREN----------------TVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred ccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeecCCCHHHEEECCCCCEEE
Confidence 9988 433322211 112355566677789999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK-PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++....... .....|+..|++||+.. .. ...+|.|+ ++|+++ .+..||.+..
T Consensus 144 ~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~P~~~~~ 205 (285)
T cd05632 144 SDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI-EGQSPFRGRK 205 (285)
T ss_pred ecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999997654332 23456789999999842 23 34556666 555554 5677876544
No 130
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95 E-value=2.1e-27 Score=216.08 Aligned_cols=240 Identities=14% Similarity=0.049 Sum_probs=168.0
Q ss_pred CCCceEEEeceeCCCC-----CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLG-----FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~-----~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++.+.||+|.....+ ..||+|.++.... ......+.+|+++++.++|||| +++++++...+..|+
T Consensus 15 ~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i--------~~~~~~~~~~~~~~~ 85 (283)
T cd05048 15 EGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNI--------VCLLGVCTKEQPTCM 85 (283)
T ss_pred CccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCccc--------ceEEEEEcCCCceEE
Confidence 5778899999876655 7899999875443 3345568889999999999999 999999999999999
Q ss_pred EEEccCCC-h-hHHhhhhhhhh-----------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 87 IGVRQSGP-K-DQISRSKINRY-----------HKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 87 vmEy~~g~-l-~~l~~~~~~~~-----------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
+|||++++ + +++........ .......++.++.|++.||.|||+++ ++|||
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~----------------i~H~d 149 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH----------------FVHRD 149 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccc
Confidence 99999987 4 34433211000 12244556778889999999999999 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccCCCC----CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+||++++++.++|+|||+++...... .....++..|++||... ..+..+|+|+ ++|+++..+..||.+
T Consensus 150 lkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 150 LAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred cccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999998653332 12234567899999743 2244566677 677777657777765
Q ss_pred CCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHH
Q psy6542 225 ESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQEL 303 (334)
Q Consensus 225 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~l 303 (334)
.+... +...+.... ..+.....+.++.. +..+|.+.+|..|| +.++
T Consensus 230 ~~~~~-------------------------~~~~i~~~~------~~~~~~~~~~~~~~--l~~~c~~~~p~~Rp~~~~i 276 (283)
T cd05048 230 FSNQE-------------------------VIEMIRSRQ------LLPCPEDCPARVYA--LMIECWNEIPARRPRFKDI 276 (283)
T ss_pred CCHHH-------------------------HHHHHHcCC------cCCCcccCCHHHHH--HHHHHccCChhhCcCHHHH
Confidence 43111 111111000 00011233445555 77778888888889 8888
Q ss_pred HHHHHH
Q psy6542 304 LGSMAR 309 (334)
Q Consensus 304 L~~l~~ 309 (334)
+++|..
T Consensus 277 ~~~l~~ 282 (283)
T cd05048 277 HTRLRS 282 (283)
T ss_pred HHHHhc
Confidence 887753
No 131
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=3.2e-27 Score=220.70 Aligned_cols=188 Identities=18% Similarity=0.172 Sum_probs=144.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||++.++.+++.||+|++.+... .......+.+|..++..++|++| +++++++.+++.+|+||||
T Consensus 11 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~ey 82 (332)
T cd05623 11 RGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWI--------TTLHYAFQDENNLYLVMDY 82 (332)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCE--------eeEEEEEecCCEEEEEEec
Confidence 46778999999999999999999975432 22233457789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|| +..+.......+ .......++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 83 ~~~g~L~~~l~~~~~~l---~~~~~~~~~~qi~~al~~lH~~~----------------iiHrDlkp~Nili~~~~~~kL 143 (332)
T cd05623 83 YVGGDLLTLLSKFEDRL---PEDMARFYLAEMVIAIDSVHQLH----------------YVHRDIKPDNILMDMNGHIRL 143 (332)
T ss_pred cCCCcHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eEecCCCHHHEEECCCCCEEE
Confidence 9988 443333222233 33444566779999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC---CccccCcccccccccc-------ccCCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP---HASVESDCILHGYIKK-------LGGPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 170 ~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~-------~~~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
+|||++........ ....||+.|++||+.. .....+|+|+ ++|++ ..+..||.+.+.
T Consensus 144 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~el-l~g~~Pf~~~~~ 213 (332)
T cd05623 144 ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEM-LYGETPFYAESL 213 (332)
T ss_pred eecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHH-hcCCCCCCCCCH
Confidence 99999976543322 2356899999999853 1244567777 55565 556778876653
No 132
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=9.4e-27 Score=212.81 Aligned_cols=187 Identities=17% Similarity=0.177 Sum_probs=144.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.+..+++.||||.+.+... .......+.+|+.+++.++|+++ +.+++.+.+++.+|+||||
T Consensus 10 ~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i--------~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 10 KGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFV--------VSLAYAYETKDALCLVLTL 81 (285)
T ss_pred cCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCe--------eeeeEEEecCCEEEEEEEe
Confidence 46778999999999999999999986543 22233456779999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhh-hhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISR-SKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~-~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.|+ +..... .....+ .....+.++.|++.||.|||+.+ |+||||||+||++++++.++
T Consensus 82 ~~g~~L~~~l~~~~~~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------iiH~dikp~Nil~~~~~~~~ 142 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGF---EEGRAVFYAAEICCGLEDLHQER----------------IVYRDLKPENILLDDHGHIR 142 (285)
T ss_pred cCCCcHHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EEeCCCCHHHEEECCCCCEE
Confidence 9887 543322 221122 44555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC-CccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP-HASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++........ ....|+..|++||+... .+..+|+|+ ++|+++. +.+||....
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~-g~~Pf~~~~ 205 (285)
T cd05630 143 ISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPFQQRK 205 (285)
T ss_pred EeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh-CCCCCCCCC
Confidence 999999976544332 23467899999998532 244567777 5566554 677876543
No 133
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=3e-27 Score=242.16 Aligned_cols=196 Identities=16% Similarity=0.126 Sum_probs=144.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~ivmE 89 (334)
+++...||+|.++.++..||+|++............+..|+.+++.|+|||| |+++++|.. ++.+|||||
T Consensus 23 ~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNI--------Vrl~d~f~de~~~~lyIVME 94 (1021)
T PTZ00266 23 NGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNI--------VRYIDRFLNKANQKLYILME 94 (1021)
T ss_pred cCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCc--------CeEEEEEEecCCCEEEEEEe
Confidence 4677899999999999999999998766555556678889999999999999 999998853 467999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-----
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE----- 163 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~----- 163 (334)
|++++ +..++..............++.|+.||+.||.|||+.+.. ....+|+||||||+|||++.
T Consensus 95 Y~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~---------~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 95 FCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDG---------PNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccc---------cccCCceeccCcHHHeEeecCcccc
Confidence 99987 5443332222222346667788889999999999985310 00122999999999999964
Q ss_pred ------------CCCEEEEecccccccCCCC-CCccccCcccccccccc---c-cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 164 ------------HGHVRISDLGLACDFSKKK-PHASVESDCILHGYIKK---L-GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 164 ------------~~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~---~-~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
.+.+||+|||++..+.... .....||+.|++||+.. . ..+.+|+|+ ++|++ +++..||.
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL-LTGk~PF~ 244 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL-CSGKTPFH 244 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH-HHCCCCCC
Confidence 2448999999998765443 23456899999999852 2 234566676 55555 45666775
Q ss_pred CC
Q psy6542 224 PE 225 (334)
Q Consensus 224 ~~ 225 (334)
..
T Consensus 245 ~~ 246 (1021)
T PTZ00266 245 KA 246 (1021)
T ss_pred cC
Confidence 43
No 134
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=8.8e-27 Score=212.07 Aligned_cols=179 Identities=15% Similarity=0.132 Sum_probs=143.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..+++.||||.+..... ....+.+.+|++++++++|||| +++++.+..++..++||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 11 HGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYI--------IGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCe--------eeEEEEEEECCEEEEEEecC
Confidence 56677999999999999999999976533 2244568889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ ++.. ... ....+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+
T Consensus 82 ~~~~l~~~-----~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dlkp~Nill~~~~~~~l~ 137 (279)
T cd06619 82 DGGSLDVY-----RKI---PEHVLGRIAVAVVKGLTYLWSLK----------------ILHRDVKPSNMLVNTRGQVKLC 137 (279)
T ss_pred CCCChHHh-----hcC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeeCCCCHHHEEECCCCCEEEe
Confidence 998 4222 112 33445567789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++............++..|++||+.. . .+..+|+|+ ++|+++. +..||..
T Consensus 138 dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~-g~~pf~~ 195 (279)
T cd06619 138 DFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELAL-GRFPYPQ 195 (279)
T ss_pred eCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHh-CCCCchh
Confidence 99999877665555667889999999843 2 244566666 5566554 6667644
No 135
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.95 E-value=4.8e-27 Score=239.55 Aligned_cols=190 Identities=17% Similarity=0.121 Sum_probs=145.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.+++.+.||+|.+..+|+.||||+++.... .....+++.+|+++++.++|||| +++++++.+++..|+|||
T Consensus 11 GkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNI--------Vkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 11 GKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGI--------VPVYSICSDGDPVYYTMP 82 (932)
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCc--------CeEEEEEeeCCEEEEEEE
Confidence 367888999999999999999999986543 34456678899999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhh--hhh-----hHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 90 RQSGP-KDQISRSKI--NRY-----HKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 90 y~~g~-l~~l~~~~~--~~~-----~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
|++|+ +..+..... ... .......++.++.||+.||.|||+++ |+||||||+|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G----------------IIHRDLKPeNILL 146 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG----------------VLHRDLKPDNILL 146 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCchheEEE
Confidence 99998 444333211 011 11123456778889999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCCC--------------------CCccccCcccccccccc-cc-CCcceeeh---hHHHHHc
Q psy6542 162 DEHGHVRISDLGLACDFSKKK--------------------PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLF 216 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~~--------------------~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~ 216 (334)
+.++.++|+|||+++...... .....||+.|++||+.. .. +..+|+|+ ++|+++
T Consensus 147 d~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL- 225 (932)
T PRK13184 147 GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML- 225 (932)
T ss_pred cCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH-
Confidence 999999999999998652110 11246899999999843 23 44566666 555654
Q ss_pred CCCCCCCCC
Q psy6542 217 PNRLELHPE 225 (334)
Q Consensus 217 ~~~~~~~~~ 225 (334)
++..||...
T Consensus 226 TG~~PF~~~ 234 (932)
T PRK13184 226 TLSFPYRRK 234 (932)
T ss_pred HCCCCCCCc
Confidence 456677553
No 136
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=7.1e-27 Score=209.05 Aligned_cols=188 Identities=15% Similarity=0.105 Sum_probs=146.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||+|.++.+|+.||+|.+............+.+|+++++.++|||+ +++++++.+++.+|+||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 10 KGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI--------IRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCe--------ehheeeeccCCEEEEEEEeC
Confidence 4678899999999999999999998665545556678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +..+..... .........+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+
T Consensus 82 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~----------------i~h~dl~~~nili~~~~~~~l~ 143 (256)
T cd08529 82 ENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSKK----------------ILHRDIKSLNLFLDAYDNVKIG 143 (256)
T ss_pred CCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCcceEEEeCCCCEEEc
Confidence 887 433323211 112345566777889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||+++....... ....|++.|++||+.... ...+|+|+ ++++++ ++..||...+
T Consensus 144 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~ 205 (256)
T cd08529 144 DLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECC-TGKHPFDANN 205 (256)
T ss_pred ccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999987655432 234678889999985322 44566666 555554 4666765443
No 137
>KOG0193|consensus
Probab=99.95 E-value=4.3e-27 Score=223.43 Aligned_cols=184 Identities=17% Similarity=0.091 Sum_probs=146.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
-+|+++.||+|+... .||||++......+...+.|.+|+.++++-+|.|| +-|.+++..+.. .||+-+
T Consensus 401 GsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NI--------lLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 401 GSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENI--------LLFMGACMNPPL-AIITQW 468 (678)
T ss_pred ccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhh--------eeeehhhcCCce-eeeehh
Confidence 467888999999876 89999999988877788899999999999999999 999999987776 999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+|. +...+.-.. ........+.|+.||+.|+.|||.++ |||||||..||++.+++.|||
T Consensus 469 CeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK~----------------IIHrDLKSnNIFl~~~~kVkI 529 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAKN----------------IIHRDLKSNNIFLHEDLKVKI 529 (678)
T ss_pred ccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhhh----------------hhhhhccccceEEccCCcEEE
Confidence 9999 322212111 33356667888999999999999999 999999999999999999999
Q ss_pred Eecccccc----cCCCCCCccccCccccccccc----cccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACD----FSKKKPHASVESDCILHGYIK----KLGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~----~~~~~~~~~~~t~~~~~~~v~----~~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+||||+.. ....+.....|..+||+||+. ..+|++.+|.+ ++++.|.++.+||.+.
T Consensus 530 gDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~ 596 (678)
T KOG0193|consen 530 GDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ 596 (678)
T ss_pred ecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC
Confidence 99999963 233344566788999999984 34466555555 5555555566677643
No 138
>KOG0614|consensus
Probab=99.95 E-value=4.7e-29 Score=232.20 Aligned_cols=246 Identities=15% Similarity=0.172 Sum_probs=193.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++++||-++........+|+|++++... +..-..+...|-.||..++.|.| |++|..|.+..++|+.||-|
T Consensus 431 GgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fI--------vrLYrTfrd~kyvYmLmEaC 502 (732)
T KOG0614|consen 431 GGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFI--------VRLYRTFRDSKYVYMLMEAC 502 (732)
T ss_pred CccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHH--------HHHHHHhccchhhhhhHHhh
Confidence 6788999998887777799999998765 44445577789999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
=||.-+-..++.++|.+....++.. .++.|++|||.++ ||.|||||+|++++.+|-+||.|
T Consensus 503 lGGElWTiLrdRg~Fdd~tarF~~a---cv~EAfeYLH~k~----------------iIYRDLKPENllLd~~Gy~KLVD 563 (732)
T KOG0614|consen 503 LGGELWTILRDRGSFDDYTARFYVA---CVLEAFEYLHRKG----------------IIYRDLKPENLLLDNRGYLKLVD 563 (732)
T ss_pred cCchhhhhhhhcCCcccchhhhhHH---HHHHHHHHHHhcC----------------ceeccCChhheeeccCCceEEee
Confidence 9995565566677887777776655 8999999999999 99999999999999999999999
Q ss_pred cccccccCCCC-CCccccCcccccccc-ccccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc-ccccccc
Q psy6542 172 LGLACDFSKKK-PHASVESDCILHGYI-KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ-IEEVSQD 245 (334)
Q Consensus 172 FGla~~~~~~~-~~~~~~t~~~~~~~v-~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~ 245 (334)
||+|+.+..+. +.++||||.|.+||+ +..|+..+.|+| ++.+.+..+.+||++.+....+++|+.+. ....|..
T Consensus 564 FGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~ 643 (732)
T KOG0614|consen 564 FGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRR 643 (732)
T ss_pred hhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccc
Confidence 99999887765 677999999999997 688888888877 55566677888999999888888877663 2333422
Q ss_pred cccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhc
Q psy6542 246 LITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSL 293 (334)
Q Consensus 246 ~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~ 293 (334)
.+-+....+...-...|..|++.. ...+.++--+.|+...
T Consensus 644 -I~k~a~~Lik~LCr~~P~ERLG~~-------~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 644 -ITKTATDLIKKLCRDNPTERLGYQ-------KGGINDIKKHRWFEGF 683 (732)
T ss_pred -cchhHHHHHHHHHhcCcHhhhccc-------cCChHHHHhhhhhhcC
Confidence 222333333333355799999865 2334555555665543
No 139
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.95 E-value=8.1e-27 Score=216.04 Aligned_cols=187 Identities=19% Similarity=0.162 Sum_probs=136.7
Q ss_pred CCCceEEEeceeC--CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEEEE
Q psy6542 12 RVSKWRVKPPSLK--PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~--~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~iv 87 (334)
+++...||+|.++ .+++.||||.+...... ..+.+|+++++.++|||| +++++++.. +..+|++
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 11 RGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNV--------ISLQKVFLSHADRKVWLL 78 (317)
T ss_pred cCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCC--------cceeeeEecCCCcEEEEE
Confidence 5677899999976 47889999999754332 335679999999999999 999998864 4678999
Q ss_pred EEccCCChhHHhh-hhh----hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee-
Q psy6542 88 GVRQSGPKDQISR-SKI----NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL- 161 (334)
Q Consensus 88 mEy~~g~l~~l~~-~~~----~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl- 161 (334)
|||+.+++..+.. ... ..........+..++.|++.||.|||+++ |+||||||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~----------------ivHrDlkp~Nil~~ 142 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW----------------VLHRDLKPANILVM 142 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC----------------EEcCCCCHHHEEEe
Confidence 9999998433322 111 01112345556677889999999999999 9999999999999
Q ss_pred ---CCCCCEEEEecccccccCCCC-----CCccccCcccccccccc--ccCC-cceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 162 ---DEHGHVRISDLGLACDFSKKK-----PHASVESDCILHGYIKK--LGGP-FVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 162 ---~~~~~vkl~DFGla~~~~~~~-----~~~~~~t~~~~~~~v~~--~~~~-~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
+.++.+||+|||+|+...... .....+|+.|++||+.. ..++ .+|+|+ ++.+.+.++.+||.+..
T Consensus 143 ~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 456789999999998765432 22356788999999753 2244 566666 44444455667776554
No 140
>KOG0196|consensus
Probab=99.95 E-value=5.3e-28 Score=234.74 Aligned_cols=261 Identities=14% Similarity=0.079 Sum_probs=195.0
Q ss_pred CCceEEEeceeCCCCC---cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 13 VSKWRVKPPSLKPLGF---PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~---~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+.++.|+.++.+..|+ .||||.|+....++ .+..|..|+.||-++.|||| +++-++.+....+.||+|
T Consensus 640 GEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek-qrrdFL~EAsIMGQFdHPNI--------IrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 640 GEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK-QRRDFLSEASIMGQFDHPNI--------IRLEGVVTKSKPVMIITE 710 (996)
T ss_pred ccccceecccccCCCCcceeEEEeeeccCccHH-HHhhhhhhhhhcccCCCCcE--------EEEEEEEecCceeEEEhh
Confidence 4567899999887774 58999999766554 34578889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||++| +|.+++....++ ...++..+++.|+.|+.||-+.+ ++||||...|||+|.+-.+|
T Consensus 711 yMENGsLDsFLR~~DGqf---tviQLVgMLrGIAsGMkYLsdm~----------------YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQF---TVIQLVGMLRGIASGMKYLSDMN----------------YVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred hhhCCcHHHHHhhcCCce---EeehHHHHHHHHHHHhHHHhhcC----------------chhhhhhhhheeeccceEEE
Confidence 99999 777666655566 44556677789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCcc--cc---Ccccccccc--ccccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 169 ISDLGLACDFSKKKPHAS--VE---SDCILHGYI--KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~--~~---t~~~~~~~v--~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
++||||+|.+.++....+ .| ...+++||. ..+.++.+|+|| ++||.|..+.-
T Consensus 772 VsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGER------------------ 833 (996)
T KOG0196|consen 772 VSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER------------------ 833 (996)
T ss_pred eccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCC------------------
Confidence 999999997766653222 22 367888986 355577777777 66666643322
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch--hHHHHHHHHHHhCCC--
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC--SQELLGSMARKAGKI-- 314 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~--~~~lL~~l~~~~~~~-- 314 (334)
.+|+. +.+.+...+..+ .|+. ....+|..|..+|+-||.+++..+.+. ....|++|-+.+...
T Consensus 834 ------PYWdm-SNQdVIkaIe~g--yRLP----pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~ 900 (996)
T KOG0196|consen 834 ------PYWDM-SNQDVIKAIEQG--YRLP----PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKT 900 (996)
T ss_pred ------ccccc-chHHHHHHHHhc--cCCC----CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcc
Confidence 22221 233444444221 2233 347788999999999999887766666 777889998877644
Q ss_pred CCCccccccccccccccC
Q psy6542 315 YGTTDREKNSILGTRTAN 332 (334)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~ 332 (334)
-+......+.+|.+++.+
T Consensus 901 ~~~~~~r~s~~lld~~~~ 918 (996)
T KOG0196|consen 901 IAPESPRPSQPLLDRSGS 918 (996)
T ss_pred cCCCCCCCcccccCCCCC
Confidence 445555666677665544
No 141
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95 E-value=7.4e-27 Score=211.10 Aligned_cols=187 Identities=10% Similarity=0.017 Sum_probs=141.9
Q ss_pred CCCCceEEEeceeC---CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLK---PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~---~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
..++.+.||+|..+ ..+..||+|.++..... .....+.+|+.++++++|||| +++++++..++..|+|
T Consensus 14 g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv 84 (266)
T cd05064 14 GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-KQRRGFLAEALTLGQFDHSNI--------VRLEGVITRGNTMMIV 84 (266)
T ss_pred cccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-HHHHHHHHHHHHHhcCCCCCc--------CeEEEEEecCCCcEEE
Confidence 35677889998765 56779999999865432 234567889999999999999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||++|+ ++.+.......+ ....++.++.|++.||.|||+++ ++||||||+||+++.++.
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l---~~~~~~~~~~~i~~al~~lH~~~----------------iiH~dikp~nili~~~~~ 145 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQL---VAGQLMGMLPGLASGMKYLSEMG----------------YVHKGLAAHKVLVNSDLV 145 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeeccccHhhEEEcCCCc
Confidence 9999998 544433322222 45556778889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC---CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP---HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
++++|||++........ ....++..|++||+.. .. +..+|+|+ ++|+++..+..||...
T Consensus 146 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 146 CKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred EEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 99999998765433221 1223356789999742 23 44667777 6677777677777543
No 142
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95 E-value=1e-26 Score=209.73 Aligned_cols=188 Identities=18% Similarity=0.133 Sum_probs=143.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|.++.+++.||||.++.... +......+.+|+++++.++|||+ +++++++.+++.+|++|||
T Consensus 12 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08228 12 RGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV--------IKYLDSFIEDNELNIVLEL 83 (267)
T ss_pred cCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcce--------eeeeeeEEECCeEEEEEEe
Confidence 46677899999999999999999876443 44455577889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++++ +..+................+.++.|++.||.|||+++ ++|+||||+||+++.++.++|
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~dl~~~nil~~~~~~~~l 147 (267)
T cd08228 84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR----------------VMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC----------------eeCCCCCHHHEEEcCCCCEEE
Confidence 9987 44333221111122245556777889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||++........ ....++..|++||... .....+|+|+ ++|+++. +..||..
T Consensus 148 ~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~p~~~ 208 (267)
T cd08228 148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYG 208 (267)
T ss_pred CccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhc-CCCCCcc
Confidence 99999987654432 2345778899999743 2244567777 5566655 4555543
No 143
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.4e-26 Score=224.84 Aligned_cols=176 Identities=13% Similarity=0.044 Sum_probs=137.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..+++.||||... ...+.+|++++++++|+|| |++++++..++..|+||||+
T Consensus 179 ~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnI--------v~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 179 PGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAV--------LALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred cCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCC--------CcEEEEEEECCEEEEEEEcc
Confidence 4677899999999999999999643 1234579999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.+++.......... .....++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 243 ~~~L~~~l~~~~~~---l~~~~~~~i~~qi~~aL~yLH~~g----------------IvHrDLKP~NILl~~~~~vkL~D 303 (461)
T PHA03211 243 RSDLYTYLGARLRP---LGLAQVTAVARQLLSAIDYIHGEG----------------IIHRDIKTENVLVNGPEDICLGD 303 (461)
T ss_pred CCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------EEECcCCHHHEEECCCCCEEEcc
Confidence 88743332222222 355666778889999999999999 99999999999999999999999
Q ss_pred cccccccCCCC----CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCC
Q psy6542 172 LGLACDFSKKK----PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 172 FGla~~~~~~~----~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
||+++...... .....||..|++||+.. .. ...+|+|+ ++|+++.+....|
T Consensus 304 FGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 304 FGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 99998654332 12346899999999843 22 44566666 7777776555443
No 144
>KOG0667|consensus
Probab=99.95 E-value=3e-27 Score=226.96 Aligned_cols=190 Identities=17% Similarity=0.143 Sum_probs=152.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
++++++|-+|++..||+.||||+++.... ...+...|+.||..|+ |.+- .-..+|+++++|...+++|||+|.
T Consensus 196 kGtFGQVvk~~d~~T~e~VAIKIiKN~k~---f~~Q~~~Ei~iL~~ln~~d~~---~~~n~Vrm~d~F~fr~HlciVfEL 269 (586)
T KOG0667|consen 196 KGSFGQVVKAYDHKTGEIVAIKIIKNKKR---FLRQAQIEIRILELLNKHDPD---DKYNIVRMLDYFYFRNHLCIVFEL 269 (586)
T ss_pred ccccceeEEEEecCCCcEEEEEeeccChH---HHHHHHHHHHHHHHHhccCCC---CCeeEEEeeeccccccceeeeehh
Confidence 67889999999999999999999996543 4456667999999998 4321 112239999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC--CCE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH--GHV 167 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~--~~v 167 (334)
++-+ .++++.++-.. .....+..++.||+.||.+||+.+ |||.||||+||||.+. ..|
T Consensus 270 L~~NLYellK~n~f~G---lsl~~ir~~~~Qil~~L~~L~~l~----------------IIHcDLKPENILL~~~~r~~v 330 (586)
T KOG0667|consen 270 LSTNLYELLKNNKFRG---LSLPLVRKFAQQILTALLFLHELG----------------IIHCDLKPENILLKDPKRSRI 330 (586)
T ss_pred hhhhHHHHHHhcCCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eeeccCChhheeeccCCcCce
Confidence 9999 56665554444 456666677779999999999999 9999999999999765 469
Q ss_pred EEEecccccccCCCCCCccccCcccccccc-ccccCC-cceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHASVESDCILHGYI-KKLGGP-FVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~~~t~~~~~~~v-~~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
||+|||+|+...+... +++.+-.|-+||| +...|. .-|+|| |+.+.|+.|.+-|.|++.
T Consensus 331 KVIDFGSSc~~~q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 331 KVIDFGSSCFESQRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred eEEecccccccCCcce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 9999999998887765 7788899999998 455555 566677 888888888877777763
No 145
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=8.4e-27 Score=210.71 Aligned_cols=188 Identities=11% Similarity=-0.015 Sum_probs=136.1
Q ss_pred CCCceEEEeceeC--CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLK--PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~--~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||+|... .....+|+|.+..... ......+.+|+++++.++|+|| +++++.+.+.+.+|+|||
T Consensus 5 ~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~ni--------i~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 5 NGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNV--------LQCLGQCIESIPYLLVLE 75 (269)
T ss_pred ccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCc--------ceEEEEECCCCceEEEEE
Confidence 5677789988643 3455788887764432 2334567789999999999999 999999999999999999
Q ss_pred ccCCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 90 RQSGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 90 y~~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|++++ +. ++...............+..++.|++.||.|||+++ |+||||||+||++++++.+
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~----------------ivH~dlkp~Nill~~~~~~ 139 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD----------------FIHSDLALRNCQLTADLSV 139 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC----------------EecccccHhheEecCCCcE
Confidence 99987 43 333322111111234456677889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCC----CCccccCcccccccccc--------cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK----PHASVESDCILHGYIKK--------LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 168 kl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~--------~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
||+|||++....... .....++..|++||+.. .. ...+|+|+ ++|+++..+..||..
T Consensus 140 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (269)
T cd05042 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPD 212 (269)
T ss_pred EEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCc
Confidence 999999987543321 11223456689999742 12 33566666 778877767777643
No 146
>KOG0574|consensus
Probab=99.95 E-value=1.4e-28 Score=216.36 Aligned_cols=227 Identities=12% Similarity=0.096 Sum_probs=163.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+|-+.||+|.++++|+.||||.+..... .+.+..|++||++++.+++ |++|+.|..+..+|||||||
T Consensus 43 EGSYGSV~KAIH~EsG~v~AIK~VPV~sD----LQEIIKEISIMQQC~S~yV--------VKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 43 EGSYGSVHKAIHRESGHVLAIKKVPVDTD----LQEIIKEISIMQQCKSKYV--------VKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred CCcchHHHHHHHhccCcEEEEEecCccch----HHHHHHHHHHHHHcCCchh--------hhhhhhhccCCceEeehhhc
Confidence 46677899999999999999999875443 3455669999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
..| ...+.+.+.+.+.+. .+..++...+.||+|||... -||||||..|||++-+|..||+
T Consensus 111 GAGSiSDI~R~R~K~L~E~---EIs~iL~~TLKGL~YLH~~~----------------KIHRDIKAGNILLNT~G~AKLA 171 (502)
T KOG0574|consen 111 GAGSISDIMRARRKPLSEQ---EISAVLRDTLKGLQYLHDLK----------------KIHRDIKAGNILLNTDGIAKLA 171 (502)
T ss_pred CCCcHHHHHHHhcCCccHH---HHHHHHHHHHhHHHHHHHHH----------------HHHhhcccccEEEcccchhhhh
Confidence 988 333435444555443 44455569999999999998 8999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccc-cccCC-cceeeh--hHHHHHcCCCCCCCCCCCCCcccchhcccccccc-
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIK-KLGGP-FVSAWQ--TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS- 243 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~-~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 243 (334)
|||.|-.+.+.. .++..|||.+|+|||. ..+|. .+|+|+ +....|+.+++|+.......+.-.+-.....++.
T Consensus 172 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~K 251 (502)
T KOG0574|consen 172 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKK 251 (502)
T ss_pred hccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCC
Confidence 999998876654 5678899999999985 45555 566666 3344447777787555433222222111111111
Q ss_pred cccccHhHHHHHHHhhccCchhhcCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
+..|...=.+++..++.+.|..|-+.
T Consensus 252 PE~WS~~F~DFi~~CLiK~PE~R~TA 277 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRSCLIKKPEERKTA 277 (502)
T ss_pred hHhhhhHHHHHHHHHhcCCHHHHHHH
Confidence 11222222345666666666666553
No 147
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=6.2e-27 Score=221.02 Aligned_cols=178 Identities=12% Similarity=0.024 Sum_probs=140.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..+++.||+|+.... ....|+.+++.++|+|| +++++++.+++..|+||||+
T Consensus 76 ~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 76 PGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSV--------IRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred CCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCC--------cChhheEEeCCeeEEEEEcc
Confidence 577889999999999999999975432 22359999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.|++..........+ ....++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 140 ~~~l~~~l~~~~~~~---~~~~~~~i~~qi~~aL~~LH~~~----------------ivHrDlkp~Nill~~~~~~kl~D 200 (357)
T PHA03209 140 SSDLYTYLTKRSRPL---PIDQALIIEKQILEGLRYLHAQR----------------IIHRDVKTENIFINDVDQVCIGD 200 (357)
T ss_pred CCcHHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEEec
Confidence 988433323222223 45556677889999999999999 99999999999999999999999
Q ss_pred cccccccCCCC-CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 172 LGLACDFSKKK-PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 172 FGla~~~~~~~-~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
||+++...... .....||..|++||+.. .. ...+|+|+ ++|+++.++.++|..
T Consensus 201 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~ 259 (357)
T PHA03209 201 LGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFED 259 (357)
T ss_pred CccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccC
Confidence 99997543332 33456889999999853 22 44566666 778888777766544
No 148
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=1.1e-26 Score=207.90 Aligned_cols=184 Identities=15% Similarity=0.078 Sum_probs=139.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+|+.||+|.+..... ......+.+|+++++.++|||| +++++++.+.+.+|+||||+
T Consensus 5 ~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 75 (252)
T cd05084 5 RGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNI--------VRLIGVCTQKQPIYIVMELV 75 (252)
T ss_pred cccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEcCCCCeEEEEeec
Confidence 45667999999999999999998875432 3344568889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +........... .....+.++.|++.||.|||+++ ++||||||+||+++.++.+||+
T Consensus 76 ~~~~L~~~~~~~~~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------i~H~dl~p~nil~~~~~~~kl~ 136 (252)
T cd05084 76 QGGDFLTFLRTEGPRL---KVKELIQMVENAAAGMEYLESKH----------------CIHRDLAARNCLVTEKNVLKIS 136 (252)
T ss_pred cCCcHHHHHHhCCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------ccccccchheEEEcCCCcEEEC
Confidence 887 433323221122 44556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCcc----ccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHAS----VESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 171 DFGla~~~~~~~~~~~----~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|||++........... ..+..|++||.... ....+|+|+ ++|+++..+.+||.
T Consensus 137 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~ 198 (252)
T cd05084 137 DFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYA 198 (252)
T ss_pred ccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 9999986543321111 11345888987432 244566666 67777766776664
No 149
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.95 E-value=1.5e-26 Score=207.24 Aligned_cols=184 Identities=14% Similarity=0.121 Sum_probs=143.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.++.+++.||+|.++..... ...+.+.+|+.+++.++|+|+ +++++++.+++.+|++|||+
T Consensus 10 ~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 10 EGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNI--------VAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred ccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCc--------ceEEEEEEECCEEEEEEeeC
Confidence 567789999999999999999999765432 234567789999999999999 99999999999999999999
Q ss_pred CCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ + +.+.......+ .....+.++.|++.||.|||+++ ++|+||||+||++++++.+++
T Consensus 81 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~~i~~al~~lH~~~----------------i~H~dl~p~nili~~~~~~~l 141 (255)
T cd08219 81 DGGDLMQKIKLQRGKLF---PEDTILQWFVQMCLGVQHIHEKR----------------VLHRDIKSKNIFLTQNGKVKL 141 (255)
T ss_pred CCCcHHHHHHhccCCCC---CHHHHHHHHHHHHHHHHHHhhCC----------------cccCCCCcceEEECCCCcEEE
Confidence 987 3 33322221122 45556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||+++...... .....++..|++||+... ..+.+|+|+ ++|++ ..+..||..
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l-~~g~~p~~~ 202 (255)
T cd08219 142 GDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL-CTLKHPFQA 202 (255)
T ss_pred cccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheeh-hhccCCCCC
Confidence 9999998665433 233567888999998532 244566676 44555 445667654
No 150
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.95 E-value=9.7e-27 Score=210.37 Aligned_cols=241 Identities=12% Similarity=0.004 Sum_probs=163.9
Q ss_pred CCCceEEEeceeCCCCC--cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------Ce
Q psy6542 12 RVSKWRVKPPSLKPLGF--PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~--~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~ 83 (334)
+++...||++....++. .||+|.++.........+.+..|+++++.++|+|| +++++++... ..
T Consensus 9 ~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 9 EGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV--------MRLIGVCLQTVESEGYPS 80 (272)
T ss_pred cccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEccCCcccCCCC
Confidence 46777999999988776 58999998765444455678889999999999999 9999876432 35
Q ss_pred EEEEEEccCCC-hh-HHhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 84 HYIIGVRQSGP-KD-QISRSKIN-RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 84 ~~ivmEy~~g~-l~-~l~~~~~~-~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
.+++|||+.++ +. ++...... ..........+.++.|++.||.|||+++ |+||||||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlkp~Nil 144 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS----------------FIHRDLAARNCM 144 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC----------------eeccccchhheE
Confidence 78999999987 43 33222111 1112345556777889999999999999 999999999999
Q ss_pred eCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcc
Q psy6542 161 LDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKP 231 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~ 231 (334)
+++++.+||+|||+++....... ....+++.|++|+... .. ++.+|+|+ ++|+++.++.+||.+.......
T Consensus 145 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 224 (272)
T cd05075 145 LNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY 224 (272)
T ss_pred EcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999987654321 1223456788888743 33 44556666 7778777677777543211000
Q ss_pred cchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 232 ELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
..+..... . +..+..+..+.+ +..+|...+|..|+ +.++++.|..
T Consensus 225 -------------------------~~~~~~~~--~----~~~~~~~~~~~~--li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 225 -------------------------DYLRQGNR--L----KQPPDCLDGLYS--LMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred -------------------------HHHHcCCC--C----CCCCCCCHHHHH--HHHHHcCCCcccCcCHHHHHHHHHh
Confidence 00101000 0 011222333444 77788888888888 8888887764
No 151
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=1.8e-26 Score=213.97 Aligned_cols=183 Identities=16% Similarity=0.081 Sum_probs=136.8
Q ss_pred CCCceEEEeceeCCCCCc----EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFP----IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~----vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+++...||+|....+++. ||||.++.... ....+.+.+|+.+++.++|||| +++++++..+ ..+++
T Consensus 17 ~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni--------v~~~g~~~~~-~~~~v 86 (316)
T cd05108 17 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHV--------CRLLGICLTS-TVQLI 86 (316)
T ss_pred cCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCC--------CeEEEEEcCC-Cceee
Confidence 466779999988776665 89999875432 3345578889999999999999 9999998764 56799
Q ss_pred EEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 88 GVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 88 mEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||+.+| .+.+.... .. ......+.++.|++.||.|||+++ |+||||||+|||+++++
T Consensus 87 ~e~~~~g~l~~~l~~~~-~~---~~~~~~~~~~~qi~~~L~~LH~~~----------------iiH~dlkp~Nill~~~~ 146 (316)
T cd05108 87 TQLMPFGCLLDYVREHK-DN---IGSQYLLNWCVQIAKGMNYLEERR----------------LVHRDLAARNVLVKTPQ 146 (316)
T ss_pred eecCCCCCHHHHHHhcc-cc---CCHHHHHHHHHHHHHHHHHHHhcC----------------eeccccchhheEecCCC
Confidence 9999888 34443221 12 244556778889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCC----ccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPH----ASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~----~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.+||+|||+++........ ...++..|++||+.. .. ...+|+|+ ++|++++.+..||.+
T Consensus 147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999876544321 122355788898743 33 44566666 677777657777644
No 152
>KOG4721|consensus
Probab=99.95 E-value=1.3e-27 Score=225.24 Aligned_cols=170 Identities=15% Similarity=0.115 Sum_probs=140.4
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+.++-||+++.+ ++.||||.++..+ ..+++-|++|+|||| +.|.+++.+--.+|||||||.
T Consensus 135 GaQGAVF~Grl~--netVAVKKV~elk---------ETdIKHLRkLkH~NI--------I~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 135 GAQGAVFLGRLH--NETVAVKKVRELK---------ETDIKHLRKLKHPNI--------ITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred Ccccceeeeecc--CceehhHHHhhhh---------hhhHHHHHhccCcce--------eeEeeeecCCceeEEeeeccc
Confidence 456678888754 5899999877322 237888999999999 999999999999999999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.| +.-+++.. .......++.|..+|+.|++|||.+. |||||||.-||||+.+..|||+|
T Consensus 196 ~GqL~~VLka~----~~itp~llv~Wsk~IA~GM~YLH~hK----------------IIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 196 QGQLYEVLKAG----RPITPSLLVDWSKGIAGGMNYLHLHK----------------IIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred cccHHHHHhcc----CccCHHHHHHHHHHhhhhhHHHHHhh----------------HhhhccCCCceEeeccceEEecc
Confidence 98 54444433 23356667888999999999999999 99999999999999999999999
Q ss_pred cccccccCCCC-CCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCC
Q psy6542 172 LGLACDFSKKK-PHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 172 FGla~~~~~~~-~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~ 221 (334)
||.++.+.... ..+++||..+|+|||.+. + ..+.|+|+ ++||||+++.+.
T Consensus 256 FGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPY 311 (904)
T KOG4721|consen 256 FGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPY 311 (904)
T ss_pred ccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCc
Confidence 99999876664 356889999999999543 3 66888888 899999887753
No 153
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95 E-value=1.8e-26 Score=206.38 Aligned_cols=238 Identities=16% Similarity=0.063 Sum_probs=172.5
Q ss_pred CCCceEEEeceeCCC---CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPL---GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~---~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+++.+.||+|.+... +..||||.++...... ..+.+.+|+++++.++|+|+ +++++++.+++.+++||
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~ 75 (262)
T cd00192 5 EGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNV--------VRLLGVCTEEEPLYLVL 75 (262)
T ss_pred cCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCCh--------heeeeeecCCCceEEEE
Confidence 567789999999876 9999999998765543 45678889999999999999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhh-----hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 89 VRQSGP-KDQISRSKINR-----YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~-----~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
||+.|+ +.......... .........+.++.|++.||.|||+++ ++||||||+||+++
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~----------------i~H~di~p~nili~ 139 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK----------------FVHRDLAARNCLVG 139 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC----------------cccCccCcceEEEC
Confidence 999777 44333332100 123356667788889999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCC----CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccc
Q psy6542 163 EHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPEL 233 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~ 233 (334)
+++.++|+|||++....... .....++..|++||.... ....+|+|+ ++|+++..+..||...+...
T Consensus 140 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---- 215 (262)
T cd00192 140 EDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---- 215 (262)
T ss_pred CCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH----
Confidence 99999999999998776542 333456788999997432 345677777 66777776677765442100
Q ss_pred hhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHH
Q psy6542 234 IFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSM 307 (334)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l 307 (334)
+...+.. ....+.....++.+.+ +..++...+|..|+ +.++++++
T Consensus 216 ---------------------~~~~~~~------~~~~~~~~~~~~~~~~--li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 216 ---------------------VLEYLRK------GYRLPKPEYCPDELYE--LMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred ---------------------HHHHHHc------CCCCCCCccCChHHHH--HHHHHccCCcccCcCHHHHHHhh
Confidence 0011100 0000112233444555 77788888888888 88887765
No 154
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=3.8e-26 Score=211.08 Aligned_cols=185 Identities=13% Similarity=0.167 Sum_probs=144.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+|..||+|.+..... ......+.+|+++++.++|||| +++++++.+++.+|+||||+
T Consensus 11 ~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 11 AGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYI--------VGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCC--------CeEEEEEeeCCEEEEEeecc
Confidence 45667999999999999999999875432 3344567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ +..+.... ..+ .......++.|++.||.|||+ .+ ++||||||+|||+++++.+||
T Consensus 82 ~~~~L~~~l~~~-~~~---~~~~~~~~~~~i~~~l~~lH~~~~----------------i~H~dl~p~nil~~~~~~~~l 141 (308)
T cd06615 82 DGGSLDQVLKKA-GRI---PENILGKISIAVLRGLTYLREKHK----------------IMHRDVKPSNILVNSRGEIKL 141 (308)
T ss_pred CCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhhCC----------------EEECCCChHHEEEecCCcEEE
Confidence 987 54333322 222 445566778899999999997 57 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++............++..|++||+... ....+|+|+ ++|+++ .+..||.+..
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~-~g~~p~~~~~ 202 (308)
T cd06615 142 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMA-IGRYPIPPPD 202 (308)
T ss_pred ccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHH-hCCCCCCCcc
Confidence 9999998765555556678889999998532 234566666 555554 5566765443
No 155
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94 E-value=7.2e-27 Score=212.59 Aligned_cols=187 Identities=18% Similarity=0.140 Sum_probs=144.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.+..+|+.||||.+..........+.+.+|+.+++.++|||+ +++++++..++.+|+||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 10 EGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYV--------VKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred cCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCC--------cceeeEEecCCeeEEEeccc
Confidence 4566789999999999999999998766544455678889999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.+++..+.......+ ....++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|
T Consensus 82 ~~~L~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~ni~~~~~~~~~l~d 142 (286)
T cd07832 82 PSDLSEVLRDEERPL---PEAQVKSYMRMLLKGVAYMHANG----------------IMHRDLKPANLLISADGVLKIAD 142 (286)
T ss_pred CCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCcCHHHEEEcCCCcEEEee
Confidence 444543333222223 44556677889999999999999 99999999999999999999999
Q ss_pred cccccccCCCC---CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKK---PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~---~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
||++....... .....++..|++||+.. .. ...+|+|+ ++|+++++ .++|.+.+
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~ 205 (286)
T cd07832 143 FGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG-SPLFPGEN 205 (286)
T ss_pred eeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC-CcCcCCCC
Confidence 99998775543 23345788899999842 22 44566666 55565554 66665544
No 156
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=3.1e-26 Score=208.72 Aligned_cols=229 Identities=23% Similarity=0.229 Sum_probs=155.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHH---HhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIF---NHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il---~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.++.+.||++.+..+|+.||||.+.+.... ......+.+|..++ ...+|||+ +.+++++..++.+|+|
T Consensus 4 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--------~~~~~~~~~~~~~~lv 75 (279)
T cd05633 4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--------VCMTYAFHTPDKLCFI 75 (279)
T ss_pred cCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcE--------eEEEEEEecCCeEEEE
Confidence 467789999999999999999999865442 11222333444433 34579999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.|+ +....... ..+ ....+..++.|++.||.|||+.+ ++||||||+|||+++++.
T Consensus 76 ~e~~~~~~L~~~i~~~-~~l---~~~~~~~i~~qi~~al~~lH~~~----------------ivH~dikp~Nil~~~~~~ 135 (279)
T cd05633 76 LDLMNGGDLHYHLSQH-GVF---SEKEMRFYATEIILGLEHMHNRF----------------VVYRDLKPANILLDEHGH 135 (279)
T ss_pred EecCCCCCHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------cCCCCCCHHHEEECCCCC
Confidence 9999988 43332221 122 44555677789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhc--cc
Q psy6542 167 VRISDLGLACDFSKKKPHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFM--DQ 238 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~--~~ 238 (334)
++|+|||++............|+..|++||+.. .. ...+|+|+ ++|++ .++..||.............. ..
T Consensus 136 ~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l-~~g~~pf~~~~~~~~~~~~~~~~~~ 214 (279)
T cd05633 136 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKL-LRGHSPFRQHKTKDKHEIDRMTLTV 214 (279)
T ss_pred EEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHH-HhCCCCcCCCCCcCHHHHHHHhhcC
Confidence 999999999876655555567889999999853 22 44567777 45555 556667765432211111000 00
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
....+.... ......+...+..+|..|.++.
T Consensus 215 ~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~ 245 (279)
T cd05633 215 NVELPDSFS-PELKSLLEGLLQRDVSKRLGCL 245 (279)
T ss_pred CcCCccccC-HHHHHHHHHHhcCCHHHhcCCC
Confidence 001111111 1234455666667787777655
No 157
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94 E-value=1.1e-26 Score=212.78 Aligned_cols=188 Identities=16% Similarity=0.123 Sum_probs=145.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivm 88 (334)
..++.+.||+|.++.+++.||||.++...........+.+|+++++.++|||| +++++++..+ +.+|+||
T Consensus 14 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni--------~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 14 EEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI--------VTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred cCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE--------EEEEEEEEecCCCcEEEEe
Confidence 35667899999999999999999998665544444566789999999999999 9999998877 8899999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||+++++..+....... ......+.++.|++.||.|||+.+ ++|+||||+||++++++.++
T Consensus 86 e~~~~~L~~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~----------------i~H~dl~p~nili~~~~~~~ 146 (293)
T cd07843 86 EYVEHDLKSLMETMKQP---FLQSEVKCLMLQLLSGVAHLHDNW----------------ILHRDLKTSNLLLNNRGILK 146 (293)
T ss_pred hhcCcCHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eeeccCCHHHEEECCCCcEE
Confidence 99998754443332222 245556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++....... .....++..|++||+... ....+|.|+ ++|++ ..+.+||.+.+
T Consensus 147 l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l-~~g~~~f~~~~ 211 (293)
T cd07843 147 ICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAEL-LTKKPLFPGKS 211 (293)
T ss_pred EeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHH-HhCCCCCCCCC
Confidence 99999998765542 223456788999997432 244567777 55555 45566776654
No 158
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=3.2e-26 Score=208.75 Aligned_cols=187 Identities=14% Similarity=0.186 Sum_probs=143.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+|+.||+|.++....+ .....+.+|+++++.++|+|| +++++.+..++.+|+||||+
T Consensus 11 ~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 11 KGNYGSVYKVLHRPTGVTMAMKEIRLELDE-SKFNQIIMELDILHKAVSPYI--------VDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred ccCCeEEEEEEEcCCCcEEEEEEeecccCH-HHHHHHHHHHHHHHhcCCCcH--------HhhhhheecCCeEEEEEeec
Confidence 467789999999999999999999754332 233567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ ++.+...... ........+..++.|++.||.|||+ .+ ++||||||+||++++++.++|
T Consensus 82 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~----------------i~H~dl~p~nil~~~~~~~~l 144 (286)
T cd06622 82 DAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKEEHN----------------IIHRDVKPTNVLVNGNGQVKL 144 (286)
T ss_pred CCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------EeeCCCCHHHEEECCCCCEEE
Confidence 998 5444333210 1122455566777899999999997 47 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccccc--------CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKKLG--------GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~~--------~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++..+.........++..|++||+.... ...+|+|+ ++|++ ..+..||...
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l-~~g~~pf~~~ 210 (286)
T cd06622 145 CDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM-ALGRYPYPPE 210 (286)
T ss_pred eecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH-HhCCCCCCCc
Confidence 99999987765555556678889999974221 33566666 55555 4566677543
No 159
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=2.4e-26 Score=210.33 Aligned_cols=227 Identities=20% Similarity=0.192 Sum_probs=162.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||++.+..+++.||||.+..... .......+.+|+++++.++|||| +++++++..++.+|+||||
T Consensus 11 ~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~ 82 (290)
T cd05580 11 TGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFL--------VNLYGSFQDDSNLYLVMEY 82 (290)
T ss_pred cCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCc--------cceeeEEEcCCeEEEEEec
Confidence 46778999999999999999999986543 22334567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +....... ..+ .......++.|++.||.|||+.+ ++|+||+|+||+++.++.+||
T Consensus 83 ~~~~~L~~~~~~~-~~l---~~~~~~~~~~qil~~l~~lH~~~----------------i~H~dl~p~nili~~~~~~kl 142 (290)
T cd05580 83 VPGGELFSHLRKS-GRF---PEPVARFYAAQVVLALEYLHSLD----------------IVYRDLKPENLLLDSDGYIKI 142 (290)
T ss_pred CCCCCHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EecCCCCHHHEEECCCCCEEE
Confidence 9777 43332222 223 44555667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccccc
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQ 244 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (334)
+|||++...... .....+++.|++||... .. ...+|+|+ ++|+++. +..||...+.....+.+.... ...+.
T Consensus 143 ~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~-~~~~~ 219 (290)
T cd05580 143 TDFGFAKRVKGR-TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA-GYPPFFDDNPIQIYEKILEGK-VRFPS 219 (290)
T ss_pred eeCCCccccCCC-CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-ccCCc
Confidence 999999876555 34456788899999742 22 44567777 5566654 666776554222222222111 11222
Q ss_pred ccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 245 DLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 245 ~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.. +......+..++..+|..|+...
T Consensus 220 ~~-~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 220 FF-SPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred cC-CHHHHHHHHHHccCCHHHccCcc
Confidence 22 22334556666667787776543
No 160
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=5e-26 Score=207.22 Aligned_cols=229 Identities=23% Similarity=0.231 Sum_probs=156.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHH---HHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYI---QEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E---~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.++.+.||+|.+..+++.||||.+.+.... ......+..| .++++...||+| +.+++++.+++.+|+|
T Consensus 4 ~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~v 75 (278)
T cd05606 4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--------VCMSYAFHTPDKLSFI 75 (278)
T ss_pred cCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcE--------eeeeeeeecCCEEEEE
Confidence 466789999999999999999999875432 1111122233 344555789999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.|+ +....... ..+ ....+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 76 ~e~~~g~~L~~~l~~~-~~l---~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~di~p~nili~~~~~ 135 (278)
T cd05606 76 LDLMNGGDLHYHLSQH-GVF---SEAEMRFYAAEIILGLEHMHNRF----------------VVYRDLKPANILLDEHGH 135 (278)
T ss_pred EecCCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EEcCCCCHHHEEECCCCC
Confidence 9999988 54333222 122 44556677789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccc--hhccc
Q psy6542 167 VRISDLGLACDFSKKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPEL--IFMDQ 238 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~--i~~~~ 238 (334)
++|+|||++..+.........|+..|++||+... ....+|+|+ ++|+++ ++..||........... .....
T Consensus 136 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~~~ 214 (278)
T cd05606 136 VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPFRQHKTKDKHEIDRMTLTM 214 (278)
T ss_pred EEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHH-hCCCCCCCCCccchHHHHHHhhcc
Confidence 9999999998776655566778999999998532 234566777 555554 56778765532111111 11111
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
....+... +....+.+...+..+|..|+.+.
T Consensus 215 ~~~~~~~~-s~~~~~li~~~l~~~p~~R~~~~ 245 (278)
T cd05606 215 AVELPDSF-SPELRSLLEGLLQRDVNRRLGCL 245 (278)
T ss_pred CCCCCCcC-CHHHHHHHHHHhhcCHHhccCCC
Confidence 11111111 12344556666667777777544
No 161
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94 E-value=3.6e-26 Score=206.73 Aligned_cols=188 Identities=12% Similarity=0.007 Sum_probs=139.1
Q ss_pred CCCceEEEeceeC--CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLK--PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~--~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++.+.||+|... .++..+|+|.++...... ....+.+|+.+++.++|||| +++++.+.+...+++|||
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 5 NGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ-EQMKFLEEAQPYRSLQHSNL--------LQCLGQCTEVTPYLLVME 75 (269)
T ss_pred ccCCceEEEEEEcCCCCceEEEEEecCCCCChH-HHHHHHHHHHHHHhCCCCCE--------eeEEEEEcCCCCcEEEEE
Confidence 5778899999754 466789999988655422 33467789999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 90 RQSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 90 y~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|++|+ +..+... ............+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~----------------i~H~dlkp~nil~~~~~~~ 139 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN----------------FIHSDLALRNCLLTADLTV 139 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC----------------EeccccCcceEEEcCCCcE
Confidence 99987 4333222 2111111234455567789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCC----CCccccCccccccccccc---------cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK----PHASVESDCILHGYIKKL---------GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 168 kl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~~---------~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
||+|||+++...... .....++..|++||+... ....+|+|+ ++|+++..+..||..
T Consensus 140 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 212 (269)
T cd05087 140 KIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRH 212 (269)
T ss_pred EECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 999999997543332 122345677899998532 134566676 667776657777643
No 162
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=4.4e-26 Score=210.39 Aligned_cols=184 Identities=16% Similarity=0.048 Sum_probs=143.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||++.+..+|+.||||.+..... .....+.+.+|+++++.++|||+ +++++++.+++..|+||||
T Consensus 25 ~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni--------v~~~~~~~~~~~~~lv~e~ 96 (307)
T cd06607 25 HGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNT--------IEYKGCYLREHTAWLVMEY 96 (307)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCE--------EEEEEEEEeCCeEEEEHHh
Confidence 46778999999999999999999975543 33344567889999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.|++..+........ ....+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+
T Consensus 97 ~~g~l~~~~~~~~~~l---~~~~~~~~~~ql~~~L~~LH~~~----------------i~H~dl~p~nIl~~~~~~~kL~ 157 (307)
T cd06607 97 CLGSASDILEVHKKPL---QEVEIAAICHGALQGLAYLHSHE----------------RIHRDIKAGNILLTEPGTVKLA 157 (307)
T ss_pred hCCCHHHHHHHcccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ceecCCCcccEEECCCCCEEEe
Confidence 9988433333222222 44556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++...... ....++..|++||+.. .....+|+|+ ++|+++. +..||...
T Consensus 158 dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t-g~~p~~~~ 217 (307)
T cd06607 158 DFGSASLVSPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNM 217 (307)
T ss_pred ecCcceecCCC--CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc-CCCCCCCc
Confidence 99999765433 2345678899999742 2244667777 5566654 56666544
No 163
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94 E-value=8e-27 Score=212.29 Aligned_cols=186 Identities=17% Similarity=0.178 Sum_probs=144.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+|+.||+|.+..........+.+.+|+++++.++|+|+ +++++++..++.+++||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~~v~e~~ 82 (286)
T cd07847 11 EGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL--------VNLIEVFRRKRKLHLVFEYC 82 (286)
T ss_pred ccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE--------eeeeeEEeeCCEEEEEEecc
Confidence 4556799999999999999999987654433344567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ ++.+.... .. ........++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 83 ~~~~l~~~~~~~-~~---~~~~~~~~~~~ql~~~l~~LH~~~----------------i~H~dl~p~nil~~~~~~~~l~ 142 (286)
T cd07847 83 DHTVLNELEKNP-RG---VPEHLIKKIIWQTLQAVNFCHKHN----------------CIHRDVKPENILITKQGQIKLC 142 (286)
T ss_pred CccHHHHHHhCC-CC---CCHHHHHHHHHHHHHHHHHHHHCC----------------ceecCCChhhEEEcCCCcEEEC
Confidence 998 44443221 12 245566677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++....... .....++..|++||+.. .. ...+|+|+ ++|+++ .+.+||.+.+
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~-~g~~p~~~~~ 205 (286)
T cd07847 143 DFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELL-TGQPLWPGKS 205 (286)
T ss_pred ccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHH-hCCCCCCCCC
Confidence 999998765543 22345678889999743 22 34566666 555554 4667876554
No 164
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=1.5e-26 Score=221.04 Aligned_cols=181 Identities=14% Similarity=0.085 Sum_probs=138.4
Q ss_pred CCCCceEEEeceeC--CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLK--PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~--~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
.+++...||+|... .++..||+|.+... +...+|+++++.++|||| +++++++...+.+|+||
T Consensus 101 g~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~i--------v~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 101 TPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAI--------INLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCc--------cceeeeEeeCCEEEEEe
Confidence 35777899998754 56788999988743 234569999999999999 99999999999999999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||+.+++...... ...+ ....++.++.||+.||.|||+++ |+||||||+|||++.++.++
T Consensus 166 e~~~~~l~~~l~~-~~~l---~~~~~~~i~~ql~~aL~~LH~~g----------------ivHrDlkp~Nill~~~~~~~ 225 (392)
T PHA03207 166 PKYKCDLFTYVDR-SGPL---PLEQAITIQRRLLEALAYLHGRG----------------IIHRDVKTENIFLDEPENAV 225 (392)
T ss_pred hhcCCCHHHHHHh-cCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCCHHHEEEcCCCCEE
Confidence 9999884332221 1222 45556777889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC----CccccCccccccccccc-cC-Ccceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP----HASVESDCILHGYIKKL-GG-PFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 169 l~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~~-~~-~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
|+|||+++....... ....||..|++||+... .+ ..+|+|+ ++|++++ +..||.+...
T Consensus 226 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~-g~~pf~~~~~ 292 (392)
T PHA03207 226 LGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV-KNVTLFGKQV 292 (392)
T ss_pred EccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCC
Confidence 999999986654332 23568999999998532 23 4566666 5566655 5557766553
No 165
>KOG0579|consensus
Probab=99.94 E-value=6.9e-28 Score=229.25 Aligned_cols=228 Identities=15% Similarity=0.071 Sum_probs=163.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
|-+++||+|.+++|+...|-|+|.....+ ....+.-|++||..++||+| |++++.|...+.+||..|||.
T Consensus 43 GAFGKVyKA~nket~~lAAaKvIetkseE--ELEDylVEIeILa~CdHP~i--------vkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 43 GAFGKVYKAVNKETKLLAAAKVIETKSEE--ELEDYLVEIEILAECDHPVI--------VKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred ccchhhhhhhcccchhhhhhhhhcccchh--HHhhhhhhhhhhhcCCChHH--------HHHHHHHhccCceEEEEeecC
Confidence 45779999999999999999999865543 34456679999999999999 999999999999999999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
|| -|.+...-.+.+ .+..+..+++|++.||.|||+++ |||||||..|||+.-+|.++|+|
T Consensus 113 GGAVDaimlEL~r~L---tE~QIqvvc~q~ldALn~LHs~~----------------iIHRDLKAGNiL~TldGdirLAD 173 (1187)
T KOG0579|consen 113 GGAVDAIMLELGRVL---TEDQIQVVCYQVLDALNWLHSQN----------------IIHRDLKAGNILLTLDGDIRLAD 173 (1187)
T ss_pred CchHhHHHHHhcccc---chHHHHHHHHHHHHHHHHHhhcc----------------hhhhhccccceEEEecCcEeeec
Confidence 99 555544333333 55566677889999999999999 99999999999999999999999
Q ss_pred cccccccCCCC--CCccccCcccccccc------ccccCC-cceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccc
Q psy6542 172 LGLACDFSKKK--PHASVESDCILHGYI------KKLGGP-FVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQI 239 (334)
Q Consensus 172 FGla~~~~~~~--~~~~~~t~~~~~~~v------~~~~~~-~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 239 (334)
||.+....... ..++.|||+||+|+| .+.+|. .+|+|+ ++.+| +-..+|.+-.+.....-.+.....
T Consensus 174 FGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEM-AqiEPPHhelnpMRVllKiaKSeP 252 (1187)
T KOG0579|consen 174 FGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEM-AQIEPPHHELNPMRVLLKIAKSEP 252 (1187)
T ss_pred ccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHH-hccCCCccccchHHHHHHHhhcCC
Confidence 99987655443 467899999999998 456666 456666 44455 444555544432211111111111
Q ss_pred ccccc-ccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 240 EEVSQ-DLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 240 ~~~~~-~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.++.. .-|...=.+.+..++.++|..|.+..
T Consensus 253 PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aa 284 (1187)
T KOG0579|consen 253 PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAA 284 (1187)
T ss_pred CcccCcchhhhHHHHHHHHHHhcCCccCCCHH
Confidence 11111 11111223456666677777776654
No 166
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=3.1e-26 Score=205.80 Aligned_cols=185 Identities=11% Similarity=0.070 Sum_probs=139.8
Q ss_pred CCCceEEEece--eCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPS--LKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~--~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++...||+|. .+.++..||+|+++....+....+.+.+|+.+++.++|||| +++++++. ++..++|||
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~-~~~~~lv~e 75 (257)
T cd05116 5 SGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI--------VRMIGICE-AESWMLVME 75 (257)
T ss_pred CcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEc-CCCcEEEEe
Confidence 45667899985 45778999999998666555566778899999999999999 99999875 456799999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++++ +..+.... ..+ .....+.++.|++.||.|||+++ ++||||||+||++++++.+|
T Consensus 76 ~~~~~~L~~~l~~~-~~~---~~~~~~~i~~qi~~al~~lH~~~----------------i~H~dlkp~nill~~~~~~k 135 (257)
T cd05116 76 LAELGPLNKFLQKN-KHV---TEKNITELVHQVSMGMKYLEETN----------------FVHRDLAARNVLLVTQHYAK 135 (257)
T ss_pred cCCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeecccchhhEEEcCCCeEE
Confidence 99988 54332221 122 44556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCC-----ccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPH-----ASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 169 l~DFGla~~~~~~~~~-----~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+|||+++........ ...++..|++||.... . ...+|+|+ ++|+++..+..||.+.
T Consensus 136 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 202 (257)
T cd05116 136 ISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM 202 (257)
T ss_pred ECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999876544321 1223467889997432 2 34566666 6677776577776543
No 167
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94 E-value=4.5e-26 Score=204.87 Aligned_cols=184 Identities=17% Similarity=0.173 Sum_probs=140.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc---hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE---SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~---~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
.++...||+|.+..+++.||+|.+...... ....+.+.+|++++++++|||| +++++++.+++.+|+||
T Consensus 12 ~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 12 QGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI--------VQYYGCLRDDETLSIFM 83 (263)
T ss_pred CCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe--------eeeEEEEccCCeEEEEE
Confidence 345668999999999999999999865432 2223467889999999999999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ +....... ..+ .......++.|++.||.|||+.+ ++||||||+||++++++.+
T Consensus 84 e~~~~~~l~~~~~~~-~~~---~~~~~~~~~~~l~~~l~~lH~~~----------------i~H~dl~p~nilv~~~~~~ 143 (263)
T cd06625 84 EYMPGGSVKDQLKAY-GAL---TETVTRKYTRQILEGVEYLHSNM----------------IVHRDIKGANILRDSAGNV 143 (263)
T ss_pred EECCCCcHHHHHHHh-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCCCE
Confidence 999988 43332221 122 34445667789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCC-----CccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKP-----HASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 168 kl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|+|||+++....... ....++..|++||+... ....+|+|+ ++|+++. +..||..
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~ 209 (263)
T cd06625 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT-EKPPWAE 209 (263)
T ss_pred EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh-CCCCccc
Confidence 9999999976543221 23456788999998432 245667777 5666654 5566643
No 168
>KOG4250|consensus
Probab=99.94 E-value=3.4e-27 Score=227.78 Aligned_cols=193 Identities=19% Similarity=0.212 Sum_probs=148.6
Q ss_pred cCCCCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-----
Q psy6542 8 PRESRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN----- 82 (334)
Q Consensus 8 ~~~~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~----- 82 (334)
.+=-.|....||++++++||..||||.+++.... ....+..+|+++|++|+|+|| |+++++-++..
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~-r~~e~~~~EieilkKLnh~NI--------Vk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL-RPRERWCREIEILKKLNHPNI--------VKLFDIEETKFLGLVT 89 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhccc-chHHHHHHHHHHHHHcCchhh--------hhhcccCCccccCccc
Confidence 3334677889999999999999999999976642 234466779999999999999 99999987654
Q ss_pred -eEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 83 -SHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 83 -~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
...+|||||.|| +.......-+. ..+++..++.++..++.||.|||+++ |+||||||.||+
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~-~GLpE~e~l~lL~d~~~al~~LrEn~----------------IvHRDlKP~NIv 152 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENA-YGLPESEFLDLLSDLVSALRHLRENG----------------IVHRDLKPGNIV 152 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccc-cCCCHHHHHHHHHHHHHHHHHHHHcC----------------ceeccCCCCcEE
Confidence 468999999999 54444443322 22356667778889999999999999 999999999999
Q ss_pred e--CCCCC--EEEEecccccccCCCCC-CccccCcccccccccc--ccCCccee-eh---hHHHHHcCCCCCCCCCCC
Q psy6542 161 L--DEHGH--VRISDLGLACDFSKKKP-HASVESDCILHGYIKK--LGGPFVSA-WQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 161 l--~~~~~--vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~--~~~~~~~~-w~---~~~~~l~~~~~~~~~~~~ 227 (334)
+ ..+|+ .||+|||.|+.+.+... .+..||..|.+|++.. ..|+...| || ++|++ ++|..||-....
T Consensus 153 l~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~c-aTG~lPF~p~~~ 229 (732)
T KOG4250|consen 153 LQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYEC-ATGELPFIPFGG 229 (732)
T ss_pred EeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHH-hccCCCCCcCCC
Confidence 8 33344 69999999999888765 4567999999999965 45665544 55 55666 555667755543
No 169
>KOG0666|consensus
Probab=99.94 E-value=1.8e-27 Score=210.28 Aligned_cols=191 Identities=20% Similarity=0.170 Sum_probs=147.6
Q ss_pred CCCceEEEeceeCCCCC----cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-CCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGF----PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-PNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~----~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-~~~~~i 86 (334)
|+--++||+|..++++- .+|||.++..+....+.....+|+.+++.++|||+ +.+-.+|-. +..+|+
T Consensus 34 ~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nv--------i~Lv~Vfl~~d~~v~l 105 (438)
T KOG0666|consen 34 RGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNV--------ISLVKVFLSHDKKVWL 105 (438)
T ss_pred ccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcc--------hhHHHHHhccCceEEE
Confidence 45556999997776654 78999999887766677788899999999999999 888888776 788999
Q ss_pred EEEccCCChhHHhh-hhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-
Q psy6542 87 IGVRQSGPKDQISR-SKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH- 164 (334)
Q Consensus 87 vmEy~~g~l~~l~~-~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~- 164 (334)
++||.+.++-.++. +....-...+..-+..++.||+.|+.|||++= |+||||||+|||+..+
T Consensus 106 ~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW----------------vlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 106 LFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW----------------VLHRDLKPANILVMGDG 169 (438)
T ss_pred EehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh----------------eeeccCCcceEEEeccC
Confidence 99999999544433 32222223344445567779999999999998 9999999999999877
Q ss_pred ---CCEEEEecccccccCCCCC-----CccccCcccccccccc--ccCCcc-eeeh--hHHHHHcCCCCCCCCCC
Q psy6542 165 ---GHVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--LGGPFV-SAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 ---~~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~~~~~~-~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
|.|||+|||+||.+...-. ....-|.+|-+||++. .-|+++ |+|+ |+|+.|.+-.+-|.+..
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 9999999999998866532 2234588999999842 335555 4555 88888888777776654
No 170
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=3.8e-26 Score=205.91 Aligned_cols=235 Identities=12% Similarity=0.030 Sum_probs=164.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|..+.+++.||+|.+..... ....+.+|+++++.++|+|| +++++++..++.++++|||+
T Consensus 16 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 16 GGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNL--------VQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred CcccceEEEEEEecCCceEEEEEecCCch---HHHHHHHHHHHHHhCCCCCh--------hheEEEEcCCCCcEEEEEeC
Confidence 56677999999999999999999875432 23457789999999999999 99999999999999999999
Q ss_pred CCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.++ +. ++..... ........+.++.|++.||.|||+++ ++||||||+||++++++.+||
T Consensus 85 ~~~~L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~dlkp~nil~~~~~~~kl 145 (263)
T cd05052 85 TYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYLEKKN----------------FIHRDLAARNCLVGENHLVKV 145 (263)
T ss_pred CCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCC----------------EeecccCcceEEEcCCCcEEe
Confidence 887 43 3322221 11244455677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCc---cccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccc
Q psy6542 170 SDLGLACDFSKKKPHA---SVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEE 241 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~---~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (334)
+|||++.......... ..++..|++||... ...+.+|+|+ ++|+++..+..||.+.......
T Consensus 146 ~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~---------- 215 (263)
T cd05052 146 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---------- 215 (263)
T ss_pred CCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH----------
Confidence 9999998765543222 12245688999742 2244567777 6677766577776443211000
Q ss_pred cccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 242 VSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 242 ~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
..+.... ..+.....++.+.. +...|...+|..|+ +.++++.+..
T Consensus 216 ---------------~~~~~~~------~~~~~~~~~~~~~~--li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 216 ---------------ELLEKGY------RMERPEGCPPKVYE--LMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred ---------------HHHHCCC------CCCCCCCCCHHHHH--HHHHHccCCcccCCCHHHHHHHHHh
Confidence 0010000 00111233444555 77777888888888 7777776653
No 171
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=4.7e-26 Score=204.00 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=141.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-CCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-PNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-~~~~~ivmEy 90 (334)
+++...||++.++.+++.||+|.+..........+.+.+|+++++.++|+|+ +++++.+.. ++.+|++|||
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 10 KGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI--------VAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCe--------eeeeeeecCCCCEEEEEecc
Confidence 4677899999999999999999998765544455678889999999999999 999988764 4578999999
Q ss_pred cCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|+ + +++.......+ .....+.++.|++.||.|||+.+ ++||||||+||+++.++.++
T Consensus 82 ~~~~~l~~~l~~~~~~~l---~~~~~~~~~~~l~~~l~~lH~~~----------------i~H~di~p~nil~~~~~~~~ 142 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLL---PENQVVEWFVQIAMALQYLHEKH----------------ILHRDLKTQNVFLTRTNIIK 142 (257)
T ss_pred cCCCcHHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCchhEEEecCCcEE
Confidence 9987 4 33432221122 45566777889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|+|||++....... .....+++.|++||+.... +..+|+|+ ++|+++. +..||.
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~~~~ 203 (257)
T cd08223 143 VGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT-LKHAFN 203 (257)
T ss_pred EecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHc-CCCCCC
Confidence 99999998664332 2334578889999985332 44566666 5566655 445654
No 172
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94 E-value=1.5e-26 Score=211.89 Aligned_cols=188 Identities=17% Similarity=0.145 Sum_probs=141.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++.+.||++.++.+|+.||||.++...........+.+|+++++.++|||+ +++++++.+++.+|+||||
T Consensus 11 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 11 GEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI--------VRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred cCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCE--------eeEEEEEecCCeEEEEEec
Confidence 45778899999999999999999987654433344567789999999999999 9999999999999999999
Q ss_pred cCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CCCEE
Q psy6542 91 QSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HGHVR 168 (334)
Q Consensus 91 ~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~~vk 168 (334)
+++++ +.+....... .....+..++.||+.||.|||+++ ++||||||+||+++. ++.+|
T Consensus 83 ~~~~l~~~~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~----------------i~H~dl~p~nill~~~~~~~k 143 (294)
T PLN00009 83 LDLDLKKHMDSSPDFA---KNPRLIKTYLYQILRGIAYCHSHR----------------VLHRDLKPQNLLIDRRTNALK 143 (294)
T ss_pred ccccHHHHHHhCCCCC---cCHHHHHHHHHHHHHHHHHHHhCC----------------eeCCCCCcceEEEECCCCEEE
Confidence 98874 3332222111 244555667789999999999999 999999999999985 45799
Q ss_pred EEecccccccCCCCC--CccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP--HASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++........ ....++..|++||+... . ...+|+|+ ++|++ +++.+||....
T Consensus 144 l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l-~tg~~pf~~~~ 208 (294)
T PLN00009 144 LADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEM-VNQKPLFPGDS 208 (294)
T ss_pred EcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCC
Confidence 999999986544322 22345788999997432 2 34566666 45555 45677776543
No 173
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=8.6e-27 Score=212.18 Aligned_cols=188 Identities=19% Similarity=0.169 Sum_probs=144.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++.+.||+|.++.+|+.||||.++...........+.+|++++++++|||| +++++++.+++..|+||||
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 9 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--------VKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred cCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCC--------cchhhhcccCCcEEEEeec
Confidence 45778899999999999999999998655443344567789999999999999 9999999999999999999
Q ss_pred cCCChh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPKD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.+++. .+....... .....++.++.|++.||.|||+.+ ++||||+|+||++++++.+||
T Consensus 81 ~~~~l~~~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lh~~~----------------i~H~~l~p~nill~~~~~~~l 141 (284)
T cd07860 81 LHQDLKKFMDASPLSG---IPLPLIKSYLFQLLQGLAFCHSHR----------------VLHRDLKPQNLLINTEGAIKL 141 (284)
T ss_pred cccCHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEE
Confidence 987743 332222122 245566777889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....++..|++||+... . ...+|+|+ ++|++++ +..||.+.+
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t-g~~p~~~~~ 205 (284)
T cd07860 142 ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 205 (284)
T ss_pred eeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCC
Confidence 99999986654322 22345778999997432 2 34566666 5566655 455765543
No 174
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=4.2e-26 Score=207.78 Aligned_cols=189 Identities=13% Similarity=0.043 Sum_probs=141.0
Q ss_pred CCCceEEEecee----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSL----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+++...||+|.. ..++..||+|.++..... .....+.+|+++++.++|||| +++++++..++..|+|
T Consensus 15 ~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~lv 85 (283)
T cd05090 15 ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-QQWGEFQQEASLMAELHHPNI--------VCLLGVVTQEQPVCML 85 (283)
T ss_pred ccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-HHHHHHHHHHHHHhhCCCCCe--------eeEEEEEecCCceEEE
Confidence 466778999884 456788999999854432 233567889999999999999 9999999999999999
Q ss_pred EEccCCC-hh-HHhhhhhh------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 88 GVRQSGP-KD-QISRSKIN------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 88 mEy~~g~-l~-~l~~~~~~------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
|||+.++ +. ++...... .........++.++.|++.||.|||+++ ++|||
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~----------------i~H~d 149 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF----------------FVHKD 149 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC----------------eehhc
Confidence 9999987 43 33221100 0112345556778889999999999999 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccCCCC----CCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+||++++++.+||+|||+++...... .....++..|++||... . .+..+|+|+ ++|+++..+.+||.+
T Consensus 150 lkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05090 150 LAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYG 229 (283)
T ss_pred cccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999998664332 12233456789999753 2 244566666 677777667777655
Q ss_pred C
Q psy6542 225 E 225 (334)
Q Consensus 225 ~ 225 (334)
.
T Consensus 230 ~ 230 (283)
T cd05090 230 F 230 (283)
T ss_pred C
Confidence 4
No 175
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=7e-26 Score=204.55 Aligned_cols=242 Identities=11% Similarity=0.011 Sum_probs=164.3
Q ss_pred CCCCceEEEeceeCC---CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe----
Q psy6542 11 SRVSKWRVKPPSLKP---LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS---- 83 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~---~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~---- 83 (334)
.+++...||.|.... ++..||||.++...........+.+|+++++.++|||| +++++++.+...
T Consensus 8 g~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~ 79 (273)
T cd05035 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNV--------MKLIGVCFEASSLQKI 79 (273)
T ss_pred CcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCe--------eeEEeeeccCCccccC
Confidence 457788999998765 45889999998755544445568889999999999999 999998875543
Q ss_pred --EEEEEEccCCC-hhHHhhh-hhh-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCc
Q psy6542 84 --HYIIGVRQSGP-KDQISRS-KIN-RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPAN 158 (334)
Q Consensus 84 --~~ivmEy~~g~-l~~l~~~-~~~-~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~N 158 (334)
.+++|||+.++ +..+... ... ..........+.++.|++.||.|||+++ ++||||||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~----------------i~H~dlkp~N 143 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN----------------FIHRDLAARN 143 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccccchhe
Confidence 79999999988 4333222 111 1112355566777889999999999999 9999999999
Q ss_pred eeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCC
Q psy6542 159 ILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQS 229 (334)
Q Consensus 159 iLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~ 229 (334)
|++++++.+||+|||+++....... .....+..|++||+.. .. ...+|+|+ ++|+++..+.+||.+.....
T Consensus 144 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~ 223 (273)
T cd05035 144 CMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE 223 (273)
T ss_pred EEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999999986644321 1122345678888742 33 34566666 67777776777765433110
Q ss_pred cccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHH
Q psy6542 230 KPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMA 308 (334)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~ 308 (334)
+...+.... ........+..+.+ +...+...+|..|+ +.++++.+.
T Consensus 224 -------------------------~~~~~~~~~------~~~~~~~~~~~~~~--li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 224 -------------------------IYDYLRHGN------RLKQPEDCLDELYD--LMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred -------------------------HHHHHHcCC------CCCCCcCCCHHHHH--HHHHHcCCChhhCcCHHHHHHHHH
Confidence 001110000 00011223333444 77778888888888 777777765
Q ss_pred H
Q psy6542 309 R 309 (334)
Q Consensus 309 ~ 309 (334)
.
T Consensus 271 ~ 271 (273)
T cd05035 271 N 271 (273)
T ss_pred h
Confidence 4
No 176
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=2.1e-26 Score=211.94 Aligned_cols=187 Identities=17% Similarity=0.139 Sum_probs=141.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC--------e
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN--------S 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~--------~ 83 (334)
+++.+.||+|.+..+++.||||.+............+.+|++++++++|||| +++++++.... .
T Consensus 22 ~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 22 QGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV--------VNLIEICRTKATPYNRYKGS 93 (310)
T ss_pred cCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCc--------cceEEEEecccccccCCCce
Confidence 4677899999999999999999997655433334456679999999999999 99999877543 4
Q ss_pred EEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 84 HYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 84 ~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
.|+||||+.+++..........+ ....++.++.|++.||.|||+++ ++|+||||+||+++.
T Consensus 94 ~~lv~e~~~~~l~~~l~~~~~~~---~~~~~~~i~~qi~~al~~lH~~~----------------i~H~dl~p~nil~~~ 154 (310)
T cd07865 94 FYLVFEFCEHDLAGLLSNKNVKF---TLSEIKKVMKMLLNGLYYIHRNK----------------ILHRDMKAANILITK 154 (310)
T ss_pred EEEEEcCCCcCHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHEEECC
Confidence 69999999988544333322122 45556677889999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCCC------CccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKKP------HASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~~------~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
++.+||+|||++........ ....++..|++||+... ..+.+|+|+ ++|+++ ++.+||.+.+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~-t~~~~~~~~~ 228 (310)
T cd07865 155 DGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW-TRSPIMQGNT 228 (310)
T ss_pred CCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH-hCCCCCCCCC
Confidence 99999999999986643321 12345778999997432 245677777 556655 5667776554
No 177
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=3.6e-26 Score=208.95 Aligned_cols=248 Identities=11% Similarity=0.023 Sum_probs=169.0
Q ss_pred CCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++...||+|.++ ..+..||+|.+...... .....+.+|+.+++.++|||| +++++++.+++..|+
T Consensus 16 ~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~l 86 (288)
T cd05061 16 QGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHV--------VRLLGVVSKGQPTLV 86 (288)
T ss_pred CCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCe--------eeEEEEEcCCCCcEE
Confidence 4666789998755 23568999998754432 233457789999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhh------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 87 IGVRQSGP-KDQISRSKIN------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
||||+.|+ +......... .........+..++.|++.||.|||+++ |+||||||+||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~----------------i~H~dikp~ni 150 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK----------------FVHRDLAARNC 150 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------CcCCCCChheE
Confidence 99999988 4333332110 0122234456677889999999999999 99999999999
Q ss_pred eeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCc
Q psy6542 160 LLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSK 230 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~ 230 (334)
++++++.++|+|||+++....... ....++..|++||... ..+..+|+|+ ++|+++..+..||.+....
T Consensus 151 li~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-- 228 (288)
T cd05061 151 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-- 228 (288)
T ss_pred EEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999986543321 1123356788999743 2355677777 6677776667776443210
Q ss_pred ccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 231 PELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
+ +........ ..+.....++.+.+ +..++...+|..|+ +.++++.+.+
T Consensus 229 ----------------------~-~~~~~~~~~------~~~~~~~~~~~~~~--li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 229 ----------------------Q-VLKFVMDGG------YLDQPDNCPERVTD--LMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred ----------------------H-HHHHHHcCC------CCCCCCCCCHHHHH--HHHHHcCCChhHCcCHHHHHHHHHh
Confidence 0 000000000 00001122334455 88899999999999 8888888888
Q ss_pred HhCCCCCC
Q psy6542 310 KAGKIYGT 317 (334)
Q Consensus 310 ~~~~~~~~ 317 (334)
....-|..
T Consensus 278 ~~~~~~~~ 285 (288)
T cd05061 278 DLHPSFPE 285 (288)
T ss_pred hcCCCCCC
Confidence 76555544
No 178
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=1.6e-26 Score=213.37 Aligned_cols=188 Identities=16% Similarity=0.143 Sum_probs=141.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivm 88 (334)
.+++.+.||+|.++.+|+.||||.++...........+.+|+.++++++|+|+ +++++++.+. +.+|+||
T Consensus 16 g~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~lv~ 87 (309)
T cd07845 16 GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI--------VELKEVVVGKHLDSIFLVM 87 (309)
T ss_pred eecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCC--------cceEEEEecCCCCeEEEEE
Confidence 46778899999999999999999998654433333345679999999999999 9999998754 5689999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||+++++..+.......+ .....+.++.|++.||.|||+.+ ++||||||+||++++++.+|
T Consensus 88 e~~~~~l~~~l~~~~~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dl~p~nil~~~~~~~k 148 (309)
T cd07845 88 EYCEQDLASLLDNMPTPF---SESQVKCLMLQLLRGLQYLHENF----------------IIHRDLKVSNLLLTDKGCLK 148 (309)
T ss_pred ecCCCCHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEECCCCCEE
Confidence 999988533333221222 44556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC--CccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP--HASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++........ ....++..|++||+.. .. ...+|+|+ ++|+++ .+.+||.+.+
T Consensus 149 L~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~-~g~~~f~~~~ 213 (309)
T cd07845 149 IADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELL-AHKPLLPGKS 213 (309)
T ss_pred ECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 999999987654321 2223467799999753 22 44566666 555554 4666775544
No 179
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=5.6e-26 Score=206.24 Aligned_cols=189 Identities=12% Similarity=0.028 Sum_probs=141.1
Q ss_pred CCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++...||+|.+. .++..||||.++..... ...+.+.+|+++++.++|+|| +++++++..+...|+
T Consensus 15 ~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~l 85 (280)
T cd05049 15 EGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENI--------VKFYGVCTEGDPPIM 85 (280)
T ss_pred ccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCc--------hheeeEEecCCCeEE
Confidence 4677799999875 44688999998765432 245678899999999999999 999999999999999
Q ss_pred EEEccCCC-h-hHHhhhhh---------hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC
Q psy6542 87 IGVRQSGP-K-DQISRSKI---------NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK 155 (334)
Q Consensus 87 vmEy~~g~-l-~~l~~~~~---------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK 155 (334)
||||+.|+ + +++..... ..........+..++.|++.||.|||+++ ++|||||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~----------------i~h~dlk 149 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH----------------FVHRDLA 149 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC----------------eeccccc
Confidence 99999988 4 33322210 01112345556777889999999999999 9999999
Q ss_pred CCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 156 PANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 156 p~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+||+++.++.+||+|||+++....... ....++..|++||+.. .. ++.+|+|+ ++|+++..+..||...
T Consensus 150 p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 150 TRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred cceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999986533321 2223467799999743 22 44566666 6677766566676543
No 180
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=5.9e-26 Score=207.58 Aligned_cols=189 Identities=14% Similarity=0.082 Sum_probs=140.6
Q ss_pred CCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++..+||++.+ ..++..||+|.+.... ....+.+.+|++++++++|||+ +++++++..++.+|+
T Consensus 15 ~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~l 84 (288)
T cd05093 15 EGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHI--------VKFYGVCVEGDPLIM 84 (288)
T ss_pred CcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEecCCccEE
Confidence 566778888875 3456779999987543 2345568889999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhh---------hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKI---------NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKP 156 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~---------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp 156 (334)
||||+.++ +..+..... ...........+.++.|++.||.|||+++ ++||||||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~----------------i~H~dlkp 148 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH----------------FVHRDLAT 148 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeecccCc
Confidence 99999988 433322211 01112355667778889999999999999 99999999
Q ss_pred CceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 157 ANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 157 ~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+||++++++.+||+|||+++....... ....++..|++||+.. .. +..+|+|+ ++|+++..+.+||....
T Consensus 149 ~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~ 227 (288)
T cd05093 149 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 227 (288)
T ss_pred ceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999986543321 1223456789999753 22 44577777 66777665777765443
No 181
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=3.7e-26 Score=210.67 Aligned_cols=246 Identities=13% Similarity=0.047 Sum_probs=165.4
Q ss_pred CCCCceEEEeceeCCCCCcE--EEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPI--QIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~v--AIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++...||+|.++.++..+ |+|.++... .......+.+|++++.++ +|+|| +++++++.+++.+|+|
T Consensus 16 g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~i--------v~~~~~~~~~~~~~lv 86 (303)
T cd05088 16 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNI--------INLLGACEHRGYLYLA 86 (303)
T ss_pred cCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCc--------ceEEEEECCCCCceEE
Confidence 35677899999998888654 777665432 233445677899999999 89999 9999999999999999
Q ss_pred EEccCCC-h-hHHhhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC
Q psy6542 88 GVRQSGP-K-DQISRSKIN-----------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL 154 (334)
Q Consensus 88 mEy~~g~-l-~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl 154 (334)
|||++|+ + +++...... .........++.++.|++.||.|||+++ ++||||
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g----------------i~H~dl 150 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ----------------FIHRDL 150 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC----------------cccccc
Confidence 9999887 4 333222110 0012345566778889999999999999 999999
Q ss_pred CCCceeeCCCCCEEEEecccccccCCCCCC-ccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 155 KPANILLDEHGHVRISDLGLACDFSKKKPH-ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 155 Kp~NiLl~~~~~vkl~DFGla~~~~~~~~~-~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
||+|||+++++.+||+|||++......... ...++..|++||... ..++.+|+|+ ++|+++..+.+||.+.+..
T Consensus 151 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 151 AARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred chheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence 999999999999999999999743222111 112345688898742 2345677777 6777776577777544321
Q ss_pred CcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHH
Q psy6542 229 SKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSM 307 (334)
Q Consensus 229 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l 307 (334)
...+ .+.... +.. .....++.+.+ +...|...+|..|+ +.+++..+
T Consensus 231 ~~~~-------------------------~~~~~~--~~~----~~~~~~~~~~~--li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 231 ELYE-------------------------KLPQGY--RLE----KPLNCDDEVYD--LMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred HHHH-------------------------HHhcCC--cCC----CCCCCCHHHHH--HHHHHcCCChhhCcCHHHHHHHH
Confidence 1000 000000 000 01122333444 77778888888888 88888877
Q ss_pred HHHhCCC
Q psy6542 308 ARKAGKI 314 (334)
Q Consensus 308 ~~~~~~~ 314 (334)
.+....+
T Consensus 278 ~~~~~~~ 284 (303)
T cd05088 278 NRMLEER 284 (303)
T ss_pred HHHHHhh
Confidence 6654433
No 182
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=6e-26 Score=207.67 Aligned_cols=242 Identities=13% Similarity=0.069 Sum_probs=166.0
Q ss_pred CCCCceEEEeceeCCCC-----CcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeE
Q psy6542 11 SRVSKWRVKPPSLKPLG-----FPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~-----~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
.+++.+.||++..+..+ ..||+|.+.....+. ....+.+|+++++++ +|+|| +++++++.+++.+
T Consensus 21 g~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~E~~~l~~l~~h~~i--------~~~~~~~~~~~~~ 91 (293)
T cd05053 21 GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHKNI--------INLLGVCTQEGPL 91 (293)
T ss_pred cccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH-HHHHHHHHHHHHHhhcCCCCe--------eeEEEEEcCCCCe
Confidence 45777899999876543 789999998654433 334677899999999 89999 9999999999999
Q ss_pred EEEEEccCCC-hhHHhhhhh------------hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEe
Q psy6542 85 YIIGVRQSGP-KDQISRSKI------------NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHF 151 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~------------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiH 151 (334)
|++|||+.++ +..+..... ..........++.++.|++.||.|||+.+ |+|
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~----------------ivH 155 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK----------------CIH 155 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC----------------ccc
Confidence 9999999888 433332210 11122345666778889999999999999 999
Q ss_pred eCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCccccccccc-cc-cCCcceeeh---hHHHHHcCCCCCC
Q psy6542 152 RDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIK-KL-GGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 152 rDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~-~~-~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
|||||+||++++++.+||+|||+++....... ....++..|++||+. .. .+..+|+|+ ++|+++..+..||
T Consensus 156 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 235 (293)
T cd05053 156 RDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235 (293)
T ss_pred cccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCC
Confidence 99999999999999999999999987654322 112234678999974 22 344667777 6667766566666
Q ss_pred CCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hH
Q psy6542 223 HPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQ 301 (334)
Q Consensus 223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~ 301 (334)
.+....... ..+..... .. .....+..+.+ +...|...+|..|+ +.
T Consensus 236 ~~~~~~~~~-------------------------~~~~~~~~--~~----~~~~~~~~~~~--li~~~l~~~p~~Rps~~ 282 (293)
T cd05053 236 PGIPVEELF-------------------------KLLKEGYR--ME----KPQNCTQELYH--LMRDCWHEVPSQRPTFK 282 (293)
T ss_pred CCCCHHHHH-------------------------HHHHcCCc--CC----CCCCCCHHHHH--HHHHHcccCcccCcCHH
Confidence 443211000 00100000 00 01122233344 77778888888888 89
Q ss_pred HHHHHHHHH
Q psy6542 302 ELLGSMARK 310 (334)
Q Consensus 302 ~lL~~l~~~ 310 (334)
++++.+...
T Consensus 283 eil~~l~~~ 291 (293)
T cd05053 283 QLVEDLDRM 291 (293)
T ss_pred HHHHHHHHh
Confidence 999888753
No 183
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=1.7e-26 Score=227.29 Aligned_cols=190 Identities=17% Similarity=0.104 Sum_probs=135.9
Q ss_pred CCCceEEEeceeCCCC-CcEEEEEee---------------CCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEE
Q psy6542 12 RVSKWRVKPPSLKPLG-FPIQIGMLR---------------HRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLY 75 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~-~~vAIK~l~---------------~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~ 75 (334)
+|+.+.||+|..+... ..+++|.+. ...........+.+|+++++.++|||| ++++
T Consensus 158 ~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI--------v~l~ 229 (501)
T PHA03210 158 AGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI--------LKIE 229 (501)
T ss_pred CCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc--------CcEe
Confidence 6788899998765432 222333111 111122344567889999999999999 9999
Q ss_pred EEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC
Q psy6542 76 KVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL 154 (334)
Q Consensus 76 ~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl 154 (334)
+++.+++..|+|||++.++ ++++..................++.||+.||.|||+++ |+||||
T Consensus 230 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g----------------IiHrDL 293 (501)
T PHA03210 230 EILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK----------------LIHRDI 293 (501)
T ss_pred EEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC----------------eecCCC
Confidence 9999999999999999888 44443322211111123345567889999999999999 999999
Q ss_pred CCCceeeCCCCCEEEEecccccccCCCCC---CccccCcccccccccc-ccCC-cceeeh---hHHHHHcCCCCCCCCC
Q psy6542 155 KPANILLDEHGHVRISDLGLACDFSKKKP---HASVESDCILHGYIKK-LGGP-FVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 155 Kp~NiLl~~~~~vkl~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~-~~~~-~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
||+|||++.++.+||+|||+++.+..... ....||..|++||+.. ..++ .+|+|+ ++|+++.++.+|+...
T Consensus 294 KP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 294 KLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred CHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 99999999999999999999987755432 2356899999999853 3344 455566 7788877766665443
No 184
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.94 E-value=5.1e-26 Score=205.07 Aligned_cols=188 Identities=19% Similarity=0.179 Sum_probs=144.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||++.++.+|..||||.+..... +......+.+|+.+++.++|+|| +++++++..++.++++|||
T Consensus 12 ~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08229 12 RGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV--------IKYYASFIEDNELNIVLEL 83 (267)
T ss_pred ccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCch--------hhhhheeEeCCeEEEEEEe
Confidence 46677899999999999999999876443 33345577889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+................+.++.|++.||.|||+++ ++|+||||+||+++.++.++|
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~dl~p~nili~~~~~~~l 147 (267)
T cd08229 84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR----------------VMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEEcCCCCEEE
Confidence 9987 54433321111122355566778889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||++........ ....++..|++||... .. ...+|.|+ ++|++++ +..||.+
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~ 208 (267)
T cd08229 148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYG 208 (267)
T ss_pred CcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh-CCCCccc
Confidence 99999986654432 3346788899999742 23 33556666 5566654 5556644
No 185
>KOG0596|consensus
Probab=99.94 E-value=8.1e-27 Score=219.36 Aligned_cols=229 Identities=16% Similarity=0.125 Sum_probs=168.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+|++=+||++..-. .+.||+|.+.....+......+.+|+.+|.+|+ |.+| |++||+-..++.+||||||
T Consensus 371 ~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~I--------IqL~DYEv~d~~lYmvmE~ 441 (677)
T KOG0596|consen 371 SGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKI--------IQLYDYEVTDGYLYMVMEC 441 (677)
T ss_pred CCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceE--------EEEeeeeccCceEEEEeec
Confidence 57777999998766 667888888877777778889999999999997 7788 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
-+.++..++..+.........+++|. |++.++.++|.+| |||-||||+|+|+-+ |.+||+
T Consensus 442 Gd~DL~kiL~k~~~~~~~~~lk~ywk---qML~aV~~IH~~g----------------IVHSDLKPANFLlVk-G~LKLI 501 (677)
T KOG0596|consen 442 GDIDLNKILKKKKSIDPDWFLKFYWK---QMLLAVKTIHQHG----------------IVHSDLKPANFLLVK-GRLKLI 501 (677)
T ss_pred ccccHHHHHHhccCCCchHHHHHHHH---HHHHHHHHHHHhc----------------eeecCCCcccEEEEe-eeEEee
Confidence 99998887776554444445555665 9999999999999 999999999999976 789999
Q ss_pred ecccccccCCCCC----CccccCccccccccc-----c--------ccCCcceeeh--hHHHHHcCCCCCCCCCCCCCc-
Q psy6542 171 DLGLACDFSKKKP----HASVESDCILHGYIK-----K--------LGGPFVSAWQ--TRYAKLFPNRLELHPESGQSK- 230 (334)
Q Consensus 171 DFGla~~~~~~~~----~~~~~t~~~~~~~v~-----~--------~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~- 230 (334)
|||+|..+..+.+ .+.+||..||+||.. . ..++++|+|+ |+.+.|..+.+||..-.....
T Consensus 502 DFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aK 581 (677)
T KOG0596|consen 502 DFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAK 581 (677)
T ss_pred eechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHH
Confidence 9999998877764 356899999999962 1 1256899999 777777778888744321111
Q ss_pred ccchhcccc-cccccccccHh-HHHHHHHhhccCchhhcCCC
Q psy6542 231 PELIFMDQI-EEVSQDLITVK-GEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 231 ~~~i~~~~~-~~~~~~~~~~~-~~~~i~~~~~~~p~~r~~~~ 270 (334)
...|+.-.. -+++ +....+ .-.....++.+||.+|.+++
T Consensus 582 l~aI~~P~~~Iefp-~~~~~~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 582 LHAITDPNHEIEFP-DIPENDELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred HHhhcCCCcccccc-CCCCchHHHHHHHHHHhcCcccCCCcH
Confidence 111111100 0011 111111 33445556677888888876
No 186
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1e-25 Score=203.22 Aligned_cols=182 Identities=14% Similarity=0.118 Sum_probs=141.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..+++.||+|.++..... ....+.+|+.+++.++|||| +++++++..++.+|+||||+
T Consensus 19 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~~~~l~h~~i--------i~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 19 SGTYGDVYKARNVNTGELAAIKVIKLEPGE--DFAVVQQEIIMMKDCKHSNI--------VAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCe--------eeEEEEEEeCCEEEEEEecc
Confidence 577789999999999999999999865432 22356789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+.... ..+ .....+.++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 89 ~~~~L~~~~~~~-~~~---~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlkp~nili~~~~~~~l~ 148 (267)
T cd06645 89 GGGSLQDIYHVT-GPL---SESQIAYVSRETLQGLYYLHSKG----------------KMHRDIKGANILLTDNGHVKLA 148 (267)
T ss_pred CCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEEC
Confidence 987 54433221 123 45556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc----c-cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK----L-GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~----~-~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++....... .....|+..|++||+.. . ....+|.|+ ++|++ +.+..||..
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l-~~~~~p~~~ 211 (267)
T cd06645 149 DFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL-AELQPPMFD 211 (267)
T ss_pred cceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHH-hcCCCCccc
Confidence 999997664432 23346788999999742 2 234566666 45554 555556543
No 187
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.94 E-value=1.1e-25 Score=202.54 Aligned_cols=188 Identities=16% Similarity=0.134 Sum_probs=143.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.+..+|+.||+|.++.... +....+.+.+|++++++++|+|+ +++++++.+++..++||||
T Consensus 12 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 83 (267)
T cd08224 12 KGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV--------IKYLASFIENNELNIVLEL 83 (267)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe--------eeeeeeeecCCeEEEEEec
Confidence 56778999999999999999999986443 33345678889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+................+.++.|++.||.|||+.+ ++||||||+||+++.++.++|
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~dl~p~nil~~~~~~~~l 147 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR----------------IMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC----------------EecCCcChhhEEECCCCcEEE
Confidence 9987 54333321111112245566788889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc-ccCC-cceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK-LGGP-FVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~~~-~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||++....... .....++..|++||+.. ..++ .+|+|+ ++|+++. +..||..
T Consensus 148 ~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~ 208 (267)
T cd08224 148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYG 208 (267)
T ss_pred eccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH-CCCCccc
Confidence 9999998664432 23345778889999743 3333 556666 5566655 4556544
No 188
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.94 E-value=8.7e-26 Score=204.34 Aligned_cols=188 Identities=10% Similarity=-0.026 Sum_probs=136.3
Q ss_pred CCCceEEEeceeCCC--CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPL--GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~--~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
+++...||++..... ...+++|.++..... ...+.+.+|+.+++.++|||| +++++.+.+...+|+|||
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i--------v~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 5 NGWFGKVLLSEIYTDTGVARVVVKELKANASS-KEQNEFLQQGDPYRILQHPNI--------LQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred CCcCceEEEEEEEcCCCcceEEEEEecCCCCh-HHHHHHHHHHHHHhccCCcch--------hheEEEecCCCccEEEEe
Confidence 467789999875432 334667776654332 235578889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++++ +..................+..++.|++.||.|||+.+ ++||||||+|||++.++.++
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~----------------i~H~dikp~nil~~~~~~~~ 139 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN----------------FLHSDLALRNCFLTSDLTVK 139 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCccceEEEcCCccEE
Confidence 99987 43332322111222344556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCC----CCCccccCccccccccccc--------c-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 169 ISDLGLACDFSKK----KPHASVESDCILHGYIKKL--------G-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 169 l~DFGla~~~~~~----~~~~~~~t~~~~~~~v~~~--------~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|+|||++...... ......++..|++||+... . +..+|+|+ ++|+++.++..||..
T Consensus 140 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 211 (268)
T cd05086 140 VGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSH 211 (268)
T ss_pred ecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Confidence 9999998643221 1223456778999997421 1 23455566 778887777777644
No 189
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=6.8e-26 Score=203.21 Aligned_cols=189 Identities=19% Similarity=0.173 Sum_probs=145.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee--cCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS--EPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~--~~~~~~ivmE 89 (334)
.++.+.||+|.+..+|+.||+|.+..........+.+..|+++++.++|+|+ +++++.+. .+..+|++||
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 10 KGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI--------VRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred cCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcc--------ceeeeeeecCCCCEEEEEeh
Confidence 4678899999999999999999998765555556678889999999999999 99998776 3467899999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh-----cCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCH-----SALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH-----~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
|++++ +..+...............++.++.|++.||.||| +.+ ++|+||||+||++++
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~----------------i~h~dl~p~nili~~ 145 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT----------------VLHRDLKPANIFLDA 145 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc----------------ceecCCCHHHEEEec
Confidence 99887 54433332212223355667788889999999999 777 999999999999999
Q ss_pred CCCEEEEecccccccCCCC--CCccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKK--PHASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
++.+||+|||++....... .....++..|++||+.... +..+|.|+ ++|+++ ++..||...
T Consensus 146 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~ 213 (265)
T cd08217 146 NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC-ALSPPFTAR 213 (265)
T ss_pred CCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH-HCCCcccCc
Confidence 9999999999998776544 2344678889999984322 34566676 555654 556666443
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=8.5e-26 Score=205.27 Aligned_cols=187 Identities=19% Similarity=0.215 Sum_probs=143.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.+..+|+.||+|++.+... .......+..|+++++.++|||+ +++++++..++.+|+||||
T Consensus 3 ~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 3 KGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFI--------VSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCE--------eeeeeEEecCCeEEEEEec
Confidence 45677999999999999999999986543 22234456779999999999999 9999999999999999999
Q ss_pred cCCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++|+ +. .+.......+ ....++.++.|++.||.|||+.+ ++||||+|+||++++++.++
T Consensus 75 ~~~~~L~~~l~~~~~~~~---~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~di~p~Nil~~~~~~~~ 135 (277)
T cd05577 75 MNGGDLKYHIYNVGEPGF---PEARAIFYAAQIICGLEHLHQRR----------------IVYRDLKPENVLLDDHGNVR 135 (277)
T ss_pred CCCCcHHHHHHHcCcCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHEEECCCCCEE
Confidence 9987 43 3322221122 44555667789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC-CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK-PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++....... .....++..|++||+.. .....+|+|+ ++|+++ ++..||....
T Consensus 136 l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~ 198 (277)
T cd05577 136 ISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI-AGRSPFRQRK 198 (277)
T ss_pred EccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHh-hCCCCCCCCc
Confidence 99999998654432 23345677899999843 2244567777 555654 5677775544
No 191
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.94 E-value=5.3e-26 Score=205.26 Aligned_cols=186 Identities=13% Similarity=0.042 Sum_probs=140.0
Q ss_pred CCCCceEEEeceeCCCCC---cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGF---PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~---~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++.+.||+|..+.++. .||||.++..... ...+.+..|+++++.++|+|+ +++++++.+.+..|+|
T Consensus 14 g~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv 84 (268)
T cd05063 14 GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-KQRQDFLSEASIMGQFSHHNI--------IRLEGVVTKFKPAMII 84 (268)
T ss_pred cCCCCccEEEEEEecCCCCceEEEEEeccccCCH-HHHHHHHHHHHHHhcCCCCCe--------eEEEEEEccCCCcEEE
Confidence 456778999999887665 6999998765432 234567789999999999999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||++++ ++.........+ .....+.++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~---~~~~~~~~~~~l~~al~~lH~~~----------------i~H~dlkp~Nili~~~~~ 145 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEF---SSYQLVGMLRGIAAGMKYLSDMN----------------YVHRDLAARNILVNSNLE 145 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccccchhhEEEcCCCc
Confidence 9999988 544333221222 44455677789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCcc-----ccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKPHAS-----VESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~~-----~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+||+|||++........... ..+..|++||+.. .....+|+|+ ++|+++..+..||..
T Consensus 146 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 146 CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred EEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999986654332211 1234688999743 2244566666 667777667777644
No 192
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.94 E-value=7.5e-26 Score=209.33 Aligned_cols=186 Identities=18% Similarity=0.133 Sum_probs=136.9
Q ss_pred CCCceEEEeceeCC--CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee--cCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKP--LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS--EPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~--~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~--~~~~~~iv 87 (334)
.++.+.||+|..+. ++..||+|.+..... ...+.+|+++++.++|||| +++++++. .+..+|+|
T Consensus 11 ~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 11 RGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNV--------IALQKVFLSHSDRKVWLL 78 (317)
T ss_pred cCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCe--------eeEEEEEeccCCCeEEEE
Confidence 46778999999664 678999999875433 2345679999999999999 99999885 45678999
Q ss_pred EEccCCCh-hHHhhhhh----hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee-
Q psy6542 88 GVRQSGPK-DQISRSKI----NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL- 161 (334)
Q Consensus 88 mEy~~g~l-~~l~~~~~----~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl- 161 (334)
|||+.+++ +.+..... ..........+..++.|++.||.|||+.+ |+||||||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~----------------ivH~Dlkp~Nil~~ 142 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW----------------VLHRDLKPANILVM 142 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC----------------EEcCCCCHHHEEEc
Confidence 99999984 33322111 01112345556677889999999999999 9999999999999
Q ss_pred ---CCCCCEEEEecccccccCCCC-----CCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 162 ---DEHGHVRISDLGLACDFSKKK-----PHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 162 ---~~~~~vkl~DFGla~~~~~~~-----~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.++.+||+|||+++...... .....+|+.|++||+... . ...+|+|+ ++|+++ ++.+||....
T Consensus 143 ~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~-tg~~~f~~~~ 220 (317)
T cd07867 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQ 220 (317)
T ss_pred cCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHH-hCCCCccccc
Confidence 556789999999998765432 123457889999998532 2 34566676 555655 4566776544
No 193
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94 E-value=1.5e-25 Score=204.07 Aligned_cols=185 Identities=14% Similarity=0.099 Sum_probs=141.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..++..+|+|.+..... ...+.+.+|+++++.++|||+ +++++++..++..|+||||+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------i~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 15 DGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNI--------VKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred cCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCe--------eeEEEEEeeCCEEEEEEEec
Confidence 46678999999999999999999975443 234567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ ++.+.......+ .......++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 85 ~~~~l~~~~~~~~~~l---~~~~~~~~~~qi~~~L~~LH~~~----------------i~H~dlkp~nili~~~~~~kl~ 145 (282)
T cd06643 85 AGGAVDAVMLELERPL---TEPQIRVVCKQTLEALNYLHENK----------------IIHRDLKAGNILFTLDGDIKLA 145 (282)
T ss_pred CCCcHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCCcccEEEccCCCEEEc
Confidence 988 443322221222 44556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc------cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK------LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~------~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++....... .....++..|++||+.. .. ...+|+|+ ++|++ +.+.+||...+
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el-~~g~~p~~~~~ 212 (282)
T cd06643 146 DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AQIEPPHHELN 212 (282)
T ss_pred cccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH-ccCCCCccccC
Confidence 999997654332 23356788999999742 11 23566666 45554 55666765543
No 194
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=1.2e-25 Score=201.45 Aligned_cols=185 Identities=14% Similarity=0.103 Sum_probs=143.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..+++.|++|.+..........+.+.+|++++++++|+|| +++++++.+.+.++++|||+
T Consensus 10 ~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 10 KGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI--------IAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe--------eEEEeEEecCCeEEEEEEec
Confidence 3456689999999999999999998766544455677889999999999999 99999999999999999999
Q ss_pred CCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ +. .+.......+ .......++.|++.||.|||+.+ ++|+||||+||++++++.+||
T Consensus 82 ~~~~L~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~dl~p~ni~~~~~~~~kl 142 (256)
T cd08221 82 NGGTLYDKIVRQKGQLF---EEEMVLWYLFQIVSAVSYIHKAG----------------ILHRDIKTLNIFLTKAGLIKL 142 (256)
T ss_pred CCCcHHHHHHhccccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------ccccCCChHhEEEeCCCCEEE
Confidence 987 43 3322211122 44556677789999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||++....... .....+++.|++||+... ....+|+|+ ++|+++.+ ..||..
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g-~~~~~~ 203 (256)
T cd08221 143 GDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTL-KRTFDA 203 (256)
T ss_pred CcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHC-CCCCCC
Confidence 9999998664443 234567889999997432 234566666 56666554 445533
No 195
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94 E-value=8.6e-26 Score=203.78 Aligned_cols=238 Identities=12% Similarity=0.046 Sum_probs=165.3
Q ss_pred CCCCceEEEeceeCCC---CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPL---GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~---~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++...||+|..+.+ ...||||.++.... ....+.+.+|+.+++.++|||| +++++++.+++..|++
T Consensus 13 g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~iv 83 (266)
T cd05033 13 GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNI--------IRLEGVVTKSRPVMII 83 (266)
T ss_pred cCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCc--------ceEeEEEecCCceEEE
Confidence 4677789999988654 56899999876543 3344567889999999999999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.|+ ++.........+ .....+.++.|++.||.|||+++ |+|+||||+||++++++.
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~Lh~~~----------------i~H~di~p~nili~~~~~ 144 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKF---TVGQLVGMLRGIASGMKYLSEMN----------------YVHRDLAARNILVNSNLV 144 (266)
T ss_pred EEcCCCCCHHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCcceEEEcCCCC
Confidence 9999987 443333222222 45556778889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcc
Q psy6542 167 VRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMD 237 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 237 (334)
++|+|||+++....... ....++..|++||... .....+|+|+ ++|+++..+..||........
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~------- 217 (266)
T cd05033 145 CKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV------- 217 (266)
T ss_pred EEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH-------
Confidence 99999999997752211 1122356788898743 2244566666 667777656666532211000
Q ss_pred cccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 238 QIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 238 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
...+.... . . +.....+..+.+ +..+|...+|..|| +.++++.+.+
T Consensus 218 --------------~~~~~~~~-~-----~----~~~~~~~~~l~~--li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 218 --------------IKAVEDGY-R-----L----PPPMDCPSALYQ--LMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred --------------HHHHHcCC-C-----C----CCCCCCCHHHHH--HHHHHcCCCcccCcCHHHHHHHHHh
Confidence 01111000 0 0 111223344444 88888888999999 8888887765
No 196
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94 E-value=1.5e-26 Score=207.18 Aligned_cols=184 Identities=20% Similarity=0.238 Sum_probs=145.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.|+...||++.++.+++.||+|.+..............+|+.+++.++|||| +++++++.+.+.+++||||+
T Consensus 9 ~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i--------~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 9 SGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI--------VQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB--------CHEEEEEEESSEEEEEEEEE
T ss_pred eCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccc--------cccccccccccccccccccc
Confidence 4677899999999999999999999887655444455569999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+.. ....+ ....++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+
T Consensus 81 ~~~~L~~~l~-~~~~~---~~~~~~~~~~qi~~~L~~Lh~~~----------------i~H~dikp~NIl~~~~~~~~l~ 140 (260)
T PF00069_consen 81 PGGSLQDYLQ-KNKPL---SEEEILKIAYQILEALAYLHSKG----------------IVHRDIKPENILLDENGEVKLI 140 (260)
T ss_dssp TTEBHHHHHH-HHSSB---BHHHHHHHHHHHHHHHHHHHHTT----------------EEESSBSGGGEEESTTSEEEES
T ss_pred cccccccccc-ccccc---ccccccccccccccccccccccc----------------cccccccccccccccccccccc
Confidence 996 543333 12223 45556777889999999999999 9999999999999999999999
Q ss_pred eccccccc--CCCCCCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDF--SKKKPHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~--~~~~~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++... .........++..|++||+.. .. +..+|+|+ ++|+++.+ ..||..
T Consensus 141 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~-~~p~~~ 201 (260)
T PF00069_consen 141 DFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTG-KLPFEE 201 (260)
T ss_dssp SGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHS-SSSSTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc
Confidence 99999853 222334456789999999855 33 44556666 55666554 445543
No 197
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=8.7e-26 Score=202.74 Aligned_cols=182 Identities=15% Similarity=0.119 Sum_probs=137.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++.++ ++..+|||.+...... ...+.+|+++++.++|||| +++++++...+..|+||||+
T Consensus 14 ~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 14 SGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNL--------VQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred cCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCE--------EEEEEEEcCCCceEEEEecC
Confidence 4566789999876 4778999998754432 2346679999999999999 99999999999999999999
Q ss_pred CCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ + +++.... . .......+.++.|++.||.|||+.+ ++||||||+||++++++.+||
T Consensus 82 ~~~~L~~~l~~~~-~---~~~~~~~~~i~~qi~~~l~~lH~~~----------------i~H~dl~p~ni~i~~~~~~kl 141 (256)
T cd05059 82 ANGCLLNYLRERK-G---KLGTEWLLDMCSDVCEAMEYLESNG----------------FIHRDLAARNCLVGEDNVVKV 141 (256)
T ss_pred CCCCHHHHHHhcc-c---CCCHHHHHHHHHHHHHHHHHHHHCC----------------cccccccHhhEEECCCCcEEE
Confidence 888 4 3333222 1 2245556777889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCcccc---Ccccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVE---SDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~---t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||+++...........+ +..|++||+.. .. ...+|+|+ ++|+++..+.+||...
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 142 SDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred CCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 9999998665443222222 34688999743 23 34566666 6777776677777543
No 198
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94 E-value=1.1e-25 Score=215.53 Aligned_cols=189 Identities=16% Similarity=0.081 Sum_probs=139.5
Q ss_pred CCCCceEEEeceeCCC-----CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeE
Q psy6542 11 SRVSKWRVKPPSLKPL-----GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~-----~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
-+++.+.||+|.+..+ +..||||+++.... ....+.+.+|+++++.+. |||| +++++++.+.+.+
T Consensus 46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnI--------v~l~~~~~~~~~~ 116 (400)
T cd05105 46 GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNI--------VNLLGACTKSGPI 116 (400)
T ss_pred cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCe--------eeEEEEEccCCce
Confidence 3677889999986533 45699999976543 223457888999999996 9999 9999999999999
Q ss_pred EEEEEccCCC-h-hHHhhhhhhh---------------------------------------------------------
Q psy6542 85 YIIGVRQSGP-K-DQISRSKINR--------------------------------------------------------- 105 (334)
Q Consensus 85 ~ivmEy~~g~-l-~~l~~~~~~~--------------------------------------------------------- 105 (334)
|||||||+|| + +++.......
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 9999999988 3 3333221100
Q ss_pred ----------------------------------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEe
Q psy6542 106 ----------------------------------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHF 151 (334)
Q Consensus 106 ----------------------------------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiH 151 (334)
........++.++.|++.||.|||+.+ |+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~----------------ivH 260 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN----------------CVH 260 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeC
Confidence 001233445678889999999999999 999
Q ss_pred eCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCC
Q psy6542 152 RDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 152 rDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
|||||+|||+++++.+||+|||+++....... ....++..|++||+.. .. ...+|+|+ ++|+++..+..||
T Consensus 261 ~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~ 340 (400)
T cd05105 261 RDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY 340 (400)
T ss_pred CCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 99999999999999999999999986644322 2234567799999743 23 44566666 6777776666666
Q ss_pred CC
Q psy6542 223 HP 224 (334)
Q Consensus 223 ~~ 224 (334)
..
T Consensus 341 ~~ 342 (400)
T cd05105 341 PG 342 (400)
T ss_pred cc
Confidence 43
No 199
>KOG2052|consensus
Probab=99.94 E-value=5.9e-27 Score=215.46 Aligned_cols=175 Identities=19% Similarity=0.309 Sum_probs=142.2
Q ss_pred eeecCCCCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHh--cCCCCcccccccceeeEEEEeecC-
Q psy6542 5 RRRPRESRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNH--LRNEPFKKCVLLFKMNLYKVTSEP- 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~--l~h~~i~~~~~~~~v~~~~~~~~~- 81 (334)
|-|++|+|.++|+ |+.||||++....+.+ +.+|.+|++. |+|+|| ..|..+-..+
T Consensus 221 kGRyGEVwrG~wr---------Ge~VAVKiF~srdE~S-----WfrEtEIYqTvmLRHENI--------LgFIaaD~~~~ 278 (513)
T KOG2052|consen 221 KGRFGEVWRGRWR---------GEDVAVKIFSSRDERS-----WFRETEIYQTVMLRHENI--------LGFIAADNKDN 278 (513)
T ss_pred Cccccceeecccc---------CCceEEEEecccchhh-----hhhHHHHHHHHHhccchh--------hhhhhccccCC
Confidence 4699999999999 9999999999665533 3448888775 899999 6666554322
Q ss_pred ---CeEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCC
Q psy6542 82 ---NSHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKP 156 (334)
Q Consensus 82 ---~~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp 156 (334)
..+|+|++|-+.| .|++.+... ....++.++..+++||.+||.. ||+|+++|.|.|||||.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~tv------~~~~ml~LalS~AsGLaHLH~e--------I~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRNTV------TTEGMLKLALSIASGLAHLHME--------IVGTQGKPAIAHRDLKS 344 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhccC------CHHHHHHHHHHHhhhHHHHHHH--------HhcCCCCchhhcccccc
Confidence 3599999999888 677755432 5667788899999999999986 89999999999999999
Q ss_pred CceeeCCCCCEEEEecccccccCCCC------CCccccCcccccccccccc--------CCcceeeh---hHHHHH
Q psy6542 157 ANILLDEHGHVRISDLGLACDFSKKK------PHASVESDCILHGYIKKLG--------GPFVSAWQ---TRYAKL 215 (334)
Q Consensus 157 ~NiLl~~~~~vkl~DFGla~~~~~~~------~~~~~~t~~~~~~~v~~~~--------~~~~~~w~---~~~~~l 215 (334)
.|||+.++|.+.|+|+|||....+.. .+..+||..||+||+++.. |..+|+|+ ++||..
T Consensus 345 KNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia 420 (513)
T KOG2052|consen 345 KNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA 420 (513)
T ss_pred ccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999998766553 3556899999999995432 56788888 667765
No 200
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=9e-26 Score=203.98 Aligned_cols=187 Identities=13% Similarity=0.048 Sum_probs=141.7
Q ss_pred CCCCCceEEEeceeCCCCC---cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 10 ESRVSKWRVKPPSLKPLGF---PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 10 ~~~~~~~~V~~a~~~~~~~---~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
-.+++.+.||+|..+.++. .||||.+..... ....+.+..|+++++.++|||| +++++++.+++.+++
T Consensus 12 lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni--------~~~~~~~~~~~~~~l 82 (269)
T cd05065 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNI--------IHLEGVVTKSRPVMI 82 (269)
T ss_pred ecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCcCc--------ceEEEEECCCCceEE
Confidence 3567788999999987765 599999876433 3345678889999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
||||++|+ ++.+.......+ .....+.++.|++.||.|||+++ ++||||||+||+++.++
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~---~~~~~~~i~~~l~~al~~lH~~g----------------~~H~dl~p~nili~~~~ 143 (269)
T cd05065 83 ITEFMENGALDSFLRQNDGQF---TVIQLVGMLRGIAAGMKYLSEMN----------------YVHRDLAARNILVNSNL 143 (269)
T ss_pred EEecCCCCcHHHHHhhCCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeecccChheEEEcCCC
Confidence 99999987 544433322222 44556677889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCC----ccc---cCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPH----ASV---ESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~----~~~---~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.+||+|||++......... ... .+..|++||... .....+|+|+ ++|+++..+..||..
T Consensus 144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence 9999999999765443211 111 134688898743 2244677777 667777656667644
No 201
>KOG1151|consensus
Probab=99.94 E-value=4.1e-26 Score=209.77 Aligned_cols=184 Identities=17% Similarity=0.143 Sum_probs=147.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-----chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee-cCCeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-----ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS-EPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-----~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~-~~~~~~ 85 (334)
|+++-.||+|.+...+.-||+|+-..... .....++..+|..|.+.|.||.| |++||+|. +.+.+|
T Consensus 473 rGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRI--------VKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 473 RGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRI--------VKLYDYFSLDTDSFC 544 (775)
T ss_pred cccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCccee--------eeeeeeeeeccccce
Confidence 67777999999999999999998766554 23345688899999999999999 99999998 567899
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
-|+|||+|+ +|+.+... +.. .++.+..|+.||+.||.||.+.. |||||=||||.|||+-+.
T Consensus 545 TVLEYceGNDLDFYLKQh-klm---SEKEARSIiMQiVnAL~YLNEik--------------pPIIHYDLKPgNILLv~G 606 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQH-KLM---SEKEARSIIMQIVNALKYLNEIK--------------PPIIHYDLKPGNILLVNG 606 (775)
T ss_pred eeeeecCCCchhHHHHhh-hhh---hHHHHHHHHHHHHHHHHHHhccC--------------CCeeeeccCCccEEEecC
Confidence 999999998 77764432 233 34445566779999999999987 889999999999999554
Q ss_pred ---CCEEEEecccccccCCCCC---------CccccCccccccccc------cccCCcceeeh---hHHHHHcCCCCCC
Q psy6542 165 ---GHVRISDLGLACDFSKKKP---------HASVESDCILHGYIK------KLGGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 165 ---~~vkl~DFGla~~~~~~~~---------~~~~~t~~~~~~~v~------~~~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
|.+||+||||++.+..+.. ....||.+|+|||.. +..+.+.|+|+ ++|.++++.. ||
T Consensus 607 tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrK-PF 684 (775)
T KOG1151|consen 607 TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRK-PF 684 (775)
T ss_pred cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCC-CC
Confidence 7799999999998866542 335679999999962 23366889999 7777777665 54
No 202
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94 E-value=1.9e-25 Score=206.98 Aligned_cols=186 Identities=15% Similarity=0.074 Sum_probs=143.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
..++.+.||+|.+..+|+.||||.+..... .....+.+.+|+++++.++|||+ +++++++.+++..|+|||
T Consensus 30 g~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 30 GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT--------IEYKGCYLKEHTAWLVME 101 (313)
T ss_pred ccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC--------ccEEEEEEeCCEEEEEEe
Confidence 456778999999999999999999986544 33334567789999999999999 999999999999999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+.|++..+....... ......+.++.|++.||.|||+.+ ++||||||+||++++++.+||
T Consensus 102 ~~~~~l~~~l~~~~~~---l~~~~~~~~~~qi~~al~~LH~~g----------------i~H~dl~p~nili~~~~~~kL 162 (313)
T cd06633 102 YCLGSASDLLEVHKKP---LQEVEIAAITHGALQGLAYLHSHN----------------MIHRDIKAGNILLTEPGQVKL 162 (313)
T ss_pred cCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCChhhEEECCCCCEEE
Confidence 9988843333322222 244555667889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++..... .....|+..|++||+.. .....+|+|+ ++|++ ..+..||....
T Consensus 163 ~dfg~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el-~~g~~p~~~~~ 224 (313)
T cd06633 163 ADFGSASKSSP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-AERKPPLFNMN 224 (313)
T ss_pred eecCCCcccCC--CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHH-HhCCCCCCCCC
Confidence 99999864332 23456788899999742 2244567777 55555 45666765544
No 203
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94 E-value=4.6e-26 Score=204.49 Aligned_cols=187 Identities=18% Similarity=0.169 Sum_probs=146.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
..++...||+|.+..+++.||+|.+.+... .....+.+.+|++++++++|||| +++++.+.+++.+|+|||
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 9 GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL--------VNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh--------HHHHHhhcCCCeEEEEEe
Confidence 346677999999999999999999987554 32455678889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +....... .. .....+..++.|++.||.|||+.+ ++|+||+|+||++++++.++
T Consensus 81 ~~~~~~L~~~l~~~-~~---l~~~~~~~~~~~i~~~l~~lh~~~----------------i~h~dl~~~nil~~~~~~~~ 140 (258)
T cd05578 81 LLLGGDLRYHLSQK-VK---FSEEQVKFWICEIVLALEYLHSKG----------------IIHRDIKPDNILLDEQGHVH 140 (258)
T ss_pred CCCCCCHHHHHHhc-CC---cCHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHeEEcCCCCEE
Confidence 99998 43332222 12 244556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC-CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK-PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++....... .....++..|++||+.. .....+|.|+ ++|+++ .+..||...+
T Consensus 141 l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~ 203 (258)
T cd05578 141 ITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL-RGKRPYRGHS 203 (258)
T ss_pred EeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH-hCCCCCCCCC
Confidence 99999998765542 33456778899999742 2355677777 556655 4566766554
No 204
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94 E-value=1e-25 Score=208.52 Aligned_cols=187 Identities=21% Similarity=0.195 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.+..+++.||||.+...... ....+.+..|+++++.++|+|| +++++.+.+++..|+||||
T Consensus 11 ~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 11 KGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL--------PTLYASFQTETYLCLVMDY 82 (316)
T ss_pred CCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc--------hhheeeeecCCEEEEEEEe
Confidence 456679999999999999999999876553 2345578889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.|+ +..+... ....+ .......++.|++.||.|||+.+ ++|+||||+||+++.++.++
T Consensus 83 ~~~~~L~~~~~~~~~~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dlkp~Nili~~~~~~~ 143 (316)
T cd05574 83 CPGGELFRLLQRQPGKCL---SEEVARFYAAEVLLALEYLHLLG----------------IVYRDLKPENILLHESGHIM 143 (316)
T ss_pred cCCCCHHHHHHhCCCCcc---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCChHHeEEcCCCCEE
Confidence 9987 4333332 11223 44445567779999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCC-------------------------------CccccCcccccccccc-cc-CCcceeeh---hHH
Q psy6542 169 ISDLGLACDFSKKKP-------------------------------HASVESDCILHGYIKK-LG-GPFVSAWQ---TRY 212 (334)
Q Consensus 169 l~DFGla~~~~~~~~-------------------------------~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~ 212 (334)
|+|||++........ ....|+..|++||+.. .. +..+|+|+ ++|
T Consensus 144 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~ 223 (316)
T cd05574 144 LSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLY 223 (316)
T ss_pred EeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHH
Confidence 999999875533211 1235677899999853 22 34566666 555
Q ss_pred HHHcCCCCCCCCCC
Q psy6542 213 AKLFPNRLELHPES 226 (334)
Q Consensus 213 ~~l~~~~~~~~~~~ 226 (334)
+++ .+..||.+.+
T Consensus 224 ~l~-~g~~pf~~~~ 236 (316)
T cd05574 224 EML-YGTTPFKGSN 236 (316)
T ss_pred HHh-hCCCCCCCCc
Confidence 554 5666776554
No 205
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.94 E-value=1.4e-25 Score=200.40 Aligned_cols=185 Identities=15% Similarity=0.059 Sum_probs=140.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|.+.. ++.||+|.++..... ...+.+.+|++++++++|+|| +++++++.+.+..|+||||+
T Consensus 5 ~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~ 74 (251)
T cd05041 5 KGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNI--------VKLIGVCVQKQPIYIVMELV 74 (251)
T ss_pred cCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCe--------EEEEEEEecCCCeEEEEEcC
Confidence 46778999999988 999999998865443 344578889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +......... ......++.++.|++.||.|||+++ ++||||||+||+++.++.++|+
T Consensus 75 ~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~~----------------i~h~di~p~nili~~~~~~~l~ 135 (251)
T cd05041 75 PGGSLLTFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESKN----------------CIHRDLAARNCLVGENNVLKIS 135 (251)
T ss_pred CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC----------------EehhhcCcceEEEcCCCcEEEe
Confidence 888 4333222211 2245556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC----ccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH----ASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~----~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++......... ....+..|++||+.. .. ...+|.|+ ++|+++.++..||...
T Consensus 136 d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~ 199 (251)
T cd05041 136 DFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGM 199 (251)
T ss_pred eccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccC
Confidence 99999865432211 112245688899743 22 34555566 6677776677776544
No 206
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94 E-value=4.5e-26 Score=214.65 Aligned_cols=184 Identities=17% Similarity=0.123 Sum_probs=140.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ 85 (334)
+++...||+|.+..+|+.||||.+.+...+....+.+.+|+.+++.++|+|| +++++++..+ ...|
T Consensus 26 ~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~~ 97 (353)
T cd07850 26 SGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI--------IGLLNVFTPQKSLEEFQDVY 97 (353)
T ss_pred cCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCC--------cceeeeeccCCCccccCcEE
Confidence 4677899999999999999999987654433344566789999999999999 9999988644 3579
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||||+.+++....... + ....+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 98 lv~e~~~~~l~~~~~~~---l---~~~~~~~~~~ql~~aL~~LH~~g----------------i~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 98 LVMELMDANLCQVIQMD---L---DHERMSYLLYQMLCGIKHLHSAG----------------IIHRDLKPSNIVVKSDC 155 (353)
T ss_pred EEEeccCCCHHHHHhhc---C---CHHHHHHHHHHHHHHHHHHHhCC----------------eeeCCCCHHHEEECCCC
Confidence 99999998843322211 2 34445567789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCC-CccccCccccccccc-ccc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKP-HASVESDCILHGYIK-KLG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~-~~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.+||+|||+++....... ....++..|++||+. ... ...+|+|+ ++|+++ .+..||.+.+
T Consensus 156 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~-~g~~pf~~~~ 221 (353)
T cd07850 156 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-RGTVLFPGTD 221 (353)
T ss_pred CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHH-HCCCCCCCCC
Confidence 999999999987655432 334568889999974 223 44566666 555555 5666776554
No 207
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94 E-value=2.4e-26 Score=209.15 Aligned_cols=189 Identities=20% Similarity=0.156 Sum_probs=144.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++.+.||+|.++.+|..||||++............+.+|+++++.++|||+ +++++++.+++..|++|||
T Consensus 8 ~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--------v~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 8 GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI--------VRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred cCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc--------cCHhheeccCCeEEEEEec
Confidence 45678899999999999999999998665433344567789999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++.+..+...... ........+.++.|++.||.|||+++ ++||||+|+||++++++.++|+
T Consensus 80 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~~----------------~~H~dl~p~nil~~~~~~~~l~ 141 (283)
T cd07835 80 LDLDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSHR----------------VLHRDLKPQNLLIDREGALKLA 141 (283)
T ss_pred cCcCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC----------------eeCCCCCHHHEEEcCCCcEEEe
Confidence 98774333222110 12355666778889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++........ ....++..|++||+... . ...+|+|+ ++|+++ ++.+||.+.+
T Consensus 142 df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~ 204 (283)
T cd07835 142 DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMV-NRRPLFPGDS 204 (283)
T ss_pred ecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999986543322 22345778999997432 2 34566677 555554 5566775544
No 208
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94 E-value=1.1e-25 Score=204.60 Aligned_cols=184 Identities=17% Similarity=0.118 Sum_probs=142.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+++.||+|.++.... ...+.+.+|+++++.++|+|+ +++++++..++.+|+||||+
T Consensus 15 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 15 DGAFGKVYKAQHKETGLFAAAKIIQIESE--EELEDFMVEIDILSECKHPNI--------VGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred CCCCceEEEEEEcCCCcEEEEEEEeeCCH--HHHHHHHHHHHHHHhCCCCce--------eEEEEEEecCCeEEEEeecc
Confidence 46677999999999999999999975432 234567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ ++.+.......+ ....+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+
T Consensus 85 ~~~~L~~~~~~~~~~l---~~~~~~~~~~ql~~~l~~lh~~~----------------i~h~dl~p~nili~~~~~~~l~ 145 (280)
T cd06611 85 DGGALDSIMLELERGL---TEPQIRYVCRQMLEALNFLHSHK----------------VIHRDLKAGNILLTLDGDVKLA 145 (280)
T ss_pred CCCcHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCChhhEEECCCCCEEEc
Confidence 998 544433322223 44555677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc------cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK------LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~------~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++....... .....+++.|++||+.. .. ...+|+|+ ++|++ ..+.+||...
T Consensus 146 d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l-~~g~~p~~~~ 211 (280)
T cd06611 146 DFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL-AQMEPPHHEL 211 (280)
T ss_pred cCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHH-HhCCCCcccC
Confidence 999987654332 23345788899999742 11 23566666 45555 5566676544
No 209
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=2e-25 Score=207.06 Aligned_cols=185 Identities=15% Similarity=0.055 Sum_probs=142.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
..++...||++.+..+|..||||.+..... .....+.+..|+++++.++|+|+ +++++++.+++..|+|||
T Consensus 34 g~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 34 GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNS--------IEYKGCYLREHTAWLVME 105 (317)
T ss_pred ccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCE--------EEEEEEEeeCCeEEEEEe
Confidence 456778999999999999999999986543 33344567889999999999999 999999999999999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+.|++..+....... .....+..++.|++.||.|||+.+ |+||||+|+||++++++.++|
T Consensus 106 ~~~g~l~~~~~~~~~~---l~~~~~~~i~~~i~~~l~~lH~~~----------------i~H~dL~p~Nil~~~~~~~kl 166 (317)
T cd06635 106 YCLGSASDLLEVHKKP---LQEVEIAAITHGALQGLAYLHSHN----------------MIHRDIKAGNILLTEPGQVKL 166 (317)
T ss_pred CCCCCHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCcccEEECCCCCEEE
Confidence 9998843332222222 244555667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++...... ....++..|++||... .....+|+|+ ++|+++ .+.+||...
T Consensus 167 ~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~-~g~~p~~~~ 227 (317)
T cd06635 167 ADFGSASIASPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNM 227 (317)
T ss_pred ecCCCccccCCc--ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH-hCCCCCCCc
Confidence 999998755432 3346788899999742 2244566666 555554 456666443
No 210
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=3.8e-26 Score=209.03 Aligned_cols=190 Identities=18% Similarity=0.144 Sum_probs=141.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCe-----EE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNS-----HY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~-----~~ 85 (334)
+++...||+|.+..+|+.||||.++...........+.+|+.+++.++ |+|| +++++++...+. +|
T Consensus 11 ~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i--------~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 11 EGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYI--------VRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCc--------cceeeeEeecCCCCCceEE
Confidence 566789999999999999999998765443334456778999999996 5999 999999887655 89
Q ss_pred EEEEccCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-
Q psy6542 86 IIGVRQSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE- 163 (334)
Q Consensus 86 ivmEy~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~- 163 (334)
+||||+++++ +++................+.++.||+.||.|||+++ ++||||||+||+++.
T Consensus 83 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~----------------i~H~dl~~~nil~~~~ 146 (295)
T cd07837 83 LVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG----------------VMHRDLKPQNLLVDKQ 146 (295)
T ss_pred EEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCChHHEEEecC
Confidence 9999999884 3333222110112355666777889999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCCC--CccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKKP--HASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
++.+||+|||+++....... ....+++.|++||+.. .. ...+|+|+ ++|+++ ++..||.+.+
T Consensus 147 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~~~~~~~ 216 (295)
T cd07837 147 KGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS-RKQPLFPGDS 216 (295)
T ss_pred CCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH-cCCCCCCCCC
Confidence 88999999999986543322 2234577899999742 22 44566666 556655 4566776544
No 211
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1e-25 Score=205.98 Aligned_cols=186 Identities=17% Similarity=0.125 Sum_probs=140.0
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++...||+|.++.+|+.||||.+....... ....+.+|+++++.++|+|| +++++++.+++..|+||||
T Consensus 14 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 14 GEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANI--------VTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred eecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcce--------eeEEEEEecCCeEEEEEec
Confidence 34677799999999999999999998654321 22345679999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.+++..+.......+ ....+..++.|++.||.|||+++ ++||||||+||++++++.+||+
T Consensus 85 ~~~~L~~~~~~~~~~~---~~~~~~~~~~ql~~al~~lH~~~----------------i~H~dl~p~nil~~~~~~~kl~ 145 (291)
T cd07844 85 LDTDLKQYMDDCGGGL---SMHNVRLFLFQLLRGLAYCHQRR----------------VLHRDLKPQNLLISERGELKLA 145 (291)
T ss_pred CCCCHHHHHHhCCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecccCCHHHEEEcCCCCEEEC
Confidence 9987543323221222 44556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||+++...... .....++..|++||+.. .. ...+|+|+ ++|+++. +..||.+.
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~-g~~~~~~~ 207 (291)
T cd07844 146 DFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMAT-GRPLFPGS 207 (291)
T ss_pred ccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHh-CCCCCCCC
Confidence 999997543222 12234577889999743 22 34566666 5566554 56666443
No 212
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.94 E-value=7.3e-26 Score=209.02 Aligned_cols=192 Identities=21% Similarity=0.134 Sum_probs=144.9
Q ss_pred CCCCceEEEeceeCC--CCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEE
Q psy6542 11 SRVSKWRVKPPSLKP--LGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~--~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ 85 (334)
..++...||+|.++. +++.||||.+..... .......+.+|+.+++.++|||| +++++++.+. +.+|
T Consensus 9 g~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENV--------VSLVEVFLEHADKSVY 80 (316)
T ss_pred ccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCc--------cceEEEEeCCCCceEE
Confidence 356788999999998 899999999987542 22234556779999999999999 9999999987 8899
Q ss_pred EEEEccCCChh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-
Q psy6542 86 IIGVRQSGPKD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE- 163 (334)
Q Consensus 86 ivmEy~~g~l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~- 163 (334)
+||||+++++. .+...............+..++.|++.||.|||+.+ ++||||||+||+++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~----------------i~h~dlkp~Nil~~~~ 144 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW----------------VLHRDLKPANILVMGE 144 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC----------------EeeCCCCHHHEEEcCC
Confidence 99999998843 332222111113355666777889999999999999 999999999999999
Q ss_pred ---CCCEEEEecccccccCCCCC-----CccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 164 ---HGHVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 164 ---~~~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
++.+||+|||+++....... ....++..|++||+.. . ....+|+|+ ++|++ ..+.+||.+...
T Consensus 145 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l-~~~~~~~~~~~~ 221 (316)
T cd07842 145 GPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL-LTLEPIFKGREA 221 (316)
T ss_pred CCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHH-HhcCCCCcCCcc
Confidence 89999999999986644322 2335678899999743 2 244567777 44554 556778876654
No 213
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=1.7e-25 Score=203.20 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=142.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.+..++..||||++...... ...+.+.+|+.+++.++|+|| +++++++.+++.+|+||||+
T Consensus 14 ~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 14 KGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV--------TKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred cCCCeEEEEEEEccCCEEEEEEEEeccccH-HHHHHHHHHHHHHHhCCCCCE--------eeEEEEEEECCEEEEEEecC
Confidence 456779999999999999999998865432 234578889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+... ..+ .......++.|++.||.|||+.+ ++|+||+|+||++++++.++|+
T Consensus 85 ~~~~L~~~i~~--~~l---~~~~~~~~~~~l~~~l~~lh~~~----------------ivH~dl~p~Nil~~~~~~~~l~ 143 (277)
T cd06640 85 GGGSALDLLRA--GPF---DEFQIATMLKEILKGLDYLHSEK----------------KIHRDIKAANVLLSEQGDVKLA 143 (277)
T ss_pred CCCcHHHHHhc--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------ccCcCCChhhEEEcCCCCEEEc
Confidence 998 3332222 122 33445667789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++....... .....++..|++||+.. .....+|.|+ ++|+++ ++.+||....
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~-tg~~p~~~~~ 205 (277)
T cd06640 144 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA-KGEPPNSDMH 205 (277)
T ss_pred ccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHH-HCCCCCCCcC
Confidence 999998665433 22335677889999843 2244566666 556654 5666765443
No 214
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.9e-25 Score=201.52 Aligned_cols=181 Identities=13% Similarity=0.098 Sum_probs=139.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.++.+|+.||||++....... ...+.+|+.+++.++|||| +++++++..++.+|+||||+
T Consensus 19 ~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~--~~~~~~e~~~l~~~~h~~i--------i~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 19 SGTYGDVYKARNLHTGELAAVKIIKLEPGDD--FSLIQQEIFMVKECKHCNI--------VAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred cCCCeEEEEEEECCCCeEEEEEEEecCccch--HHHHHHHHHHHHhcCCCCe--------eeeeEEEEeCCEEEEEEeCC
Confidence 4667799999999999999999997554322 2356789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+.... ..+ .......++.|++.||.|||+.+ |+||||||+||++++++.++|+
T Consensus 89 ~~~~L~~~~~~~-~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dl~p~nill~~~~~~~l~ 148 (267)
T cd06646 89 GGGSLQDIYHVT-GPL---SELQIAYVCRETLQGLAYLHSKG----------------KMHRDIKGANILLTDNGDVKLA 148 (267)
T ss_pred CCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCCHHHEEECCCCCEEEC
Confidence 987 44332221 122 44555677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc----c-cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK----L-GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~----~-~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|||++....... .....++..|++||+.. . ....+|+|+ ++|+++. +..|+.
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~-g~~p~~ 210 (267)
T cd06646 149 DFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE-LQPPMF 210 (267)
T ss_pred cCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh-CCCCcc
Confidence 999998664332 23346788899999742 1 133566666 5666655 455654
No 215
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=2.6e-26 Score=210.55 Aligned_cols=188 Identities=16% Similarity=0.134 Sum_probs=144.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcc---hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHE---SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~---~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
..++.+.||+|.+..+|+.||||.++..... ......+..|+++++.++|+|| +++++++.+++.+|+|
T Consensus 9 g~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~lv 80 (298)
T cd07841 9 GEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNI--------IGLLDVFGHKSNINLV 80 (298)
T ss_pred eeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCC--------hhhhheeecCCEEEEE
Confidence 3567789999999999999999999876543 3344566789999999999999 9999999999999999
Q ss_pred EEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 88 GVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 88 mEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|||+.|.+..+...... ......++.++.|++.||.|||+++ ++|+||||+||+++.++.+
T Consensus 81 ~e~~~~~L~~~i~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~----------------i~H~dl~p~nill~~~~~~ 141 (298)
T cd07841 81 FEFMETDLEKVIKDKSI---VLTPADIKSYMLMTLRGLEYLHSNW----------------ILHRDLKPNNLLIASDGVL 141 (298)
T ss_pred EcccCCCHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHhCC----------------eeecCCChhhEEEcCCCCE
Confidence 99995555444333211 2245556677889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCC--CccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKP--HASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 168 kl~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|+|||+++....... ....++..|++||... .. ...+|+|+ ++|+++.+ .++|.+.+
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g-~~~~~~~~ 207 (298)
T cd07841 142 KLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR-VPFLPGDS 207 (298)
T ss_pred EEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC-CccccCCc
Confidence 9999999987655432 2234567789999742 22 34566666 56666554 66666544
No 216
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=7.6e-26 Score=205.98 Aligned_cols=239 Identities=13% Similarity=-0.013 Sum_probs=164.1
Q ss_pred CCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
.++...||+|.... .++.||||.++.... ......+.+|+.+++.++|||| +++++++.+.+..++
T Consensus 15 ~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i--------v~~~~~~~~~~~~~~ 85 (283)
T cd05091 15 EDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNI--------VCLLGVVTKEQPLSM 85 (283)
T ss_pred CCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCc--------CeEEEEEcCCCceEE
Confidence 35667899998754 468899999985543 2345568889999999999999 999999999999999
Q ss_pred EEEccCCC-hh-HHhhhhh-----------hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 87 IGVRQSGP-KD-QISRSKI-----------NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 87 vmEy~~g~-l~-~l~~~~~-----------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
++||+.++ +. ++..... ..........++.++.|++.||.|||+++ ++|||
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g----------------i~H~d 149 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH----------------VVHKD 149 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC----------------ccccc
Confidence 99999887 43 3321110 00011244456677889999999999999 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+||++++++.+||+|||+++....... ....+++.|++||... .....+|+|+ ++|+++..+..||.+
T Consensus 150 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 229 (283)
T cd05091 150 LATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 229 (283)
T ss_pred cchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999986644332 2233467899999743 2244566666 777887767777654
Q ss_pred CCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHH
Q psy6542 225 ESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQEL 303 (334)
Q Consensus 225 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~l 303 (334)
....... ..+...+. .. .....+..+.. +...|.+.+|..|| +.++
T Consensus 230 ~~~~~~~-------------------------~~i~~~~~--~~----~~~~~~~~~~~--li~~cl~~~p~~RP~~~~i 276 (283)
T cd05091 230 YSNQDVI-------------------------EMIRNRQV--LP----CPDDCPAWVYT--LMLECWNEFPSRRPRFKDI 276 (283)
T ss_pred CCHHHHH-------------------------HHHHcCCc--CC----CCCCCCHHHHH--HHHHHhCCCcccCCCHHHH
Confidence 3211000 11100000 00 01223344444 77778888888888 8888
Q ss_pred HHHHH
Q psy6542 304 LGSMA 308 (334)
Q Consensus 304 L~~l~ 308 (334)
+.+|+
T Consensus 277 ~~~l~ 281 (283)
T cd05091 277 HSRLR 281 (283)
T ss_pred HHHhh
Confidence 87765
No 217
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=9.9e-26 Score=204.71 Aligned_cols=190 Identities=13% Similarity=0.045 Sum_probs=139.5
Q ss_pred CCCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 11 SRVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.+++...||+|.++ .++..||||.+..... ......+.+|+.+++.++|||| +++++++.+++..+
T Consensus 15 g~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i--------v~~~~~~~~~~~~~ 85 (277)
T cd05062 15 GQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHV--------VRLLGVVSQGQPTL 85 (277)
T ss_pred ccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCe--------eeEEEEEcCCCCeE
Confidence 35667789988764 3467899999865432 2234567889999999999999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhhhh------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCc
Q psy6542 86 IIGVRQSGP-KDQISRSKINR------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPAN 158 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~N 158 (334)
+||||+.++ ++.+....... ........++.++.|++.||.|||+.+ ++||||||+|
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~----------------~vH~dlkp~N 149 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK----------------FVHRDLAARN 149 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCcchhe
Confidence 999999987 54433321111 011234556677889999999999999 9999999999
Q ss_pred eeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 159 ILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 159 iLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|++++++.++|+|||+++....... ....++..|++||+.. ..+..+|+|+ ++|+++..+..||.+.
T Consensus 150 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~ 225 (277)
T cd05062 150 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM 225 (277)
T ss_pred EEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999986543321 1223466789999743 2344566677 6777777666676443
No 218
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=1.2e-25 Score=203.66 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=140.7
Q ss_pred CCCceEEEeceeCCC-----CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKPL-----GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~-----~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++...||++..+.. +..||||.+....... ....+.+|+++++.++|+|| +++++++..++..|+
T Consensus 16 ~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~~ 86 (277)
T cd05032 16 QGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR-ERIEFLNEASVMKEFNCHHV--------VRLLGVVSTGQPTLV 86 (277)
T ss_pred CCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH-HHHHHHHHHHHHHhCCCCce--------eEEEEEEcCCCCcEE
Confidence 466778999887654 4889999987554322 33467789999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhhh------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 87 IGVRQSGP-KDQISRSKINR------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
||||++++ +..+....... ........++.++.|++.||.|||+.+ ++||||||+||
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~di~p~ni 150 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK----------------FVHRDLAARNC 150 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------ccccccChheE
Confidence 99999877 54433321110 011234556778889999999999999 99999999999
Q ss_pred eeCCCCCEEEEecccccccCCCC----CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 160 LLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+++.++.+||+|||+++...... .....++..|++||... .....+|+|+ ++|+++..+..||.+.
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 225 (277)
T cd05032 151 MVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL 225 (277)
T ss_pred EEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC
Confidence 99999999999999998654432 12234567789999743 3345677777 6667666567676543
No 219
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=3.7e-26 Score=207.83 Aligned_cols=188 Identities=16% Similarity=0.142 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|.+..+|+.||||.++...... ....+.+|+++++.++|+|+ +++++++.+.+..|+||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 10 EGTYATVYKGRNRTTGEIVALKEIHLDAEEG-TPSTAIREISLMKELKHENI--------VRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred cCCceEEEEEEECCCCeEEEEEEeccccccc-chHHHHHHHHHHHhhcCCCE--------eeeeeeEeeCCcEEEEEecC
Confidence 4567899999999999999999998654422 23355679999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
.|++..+...... ...........++.|++.||.|||+.+ ++||||||+||++++++.++|+|
T Consensus 81 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~----------------i~h~dl~p~ni~~~~~~~~~l~d 143 (284)
T cd07836 81 DKDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENR----------------VLHRDLKPQNLLINKRGELKLAD 143 (284)
T ss_pred CccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCC----------------eeeCCCCHHHEEECCCCcEEEee
Confidence 9884333222111 112355556777889999999999999 99999999999999999999999
Q ss_pred cccccccCCCCC--CccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKKP--HASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
||++........ ....++..|++||+... . ...+|.|+ ++|+++. +..||.+.+
T Consensus 144 ~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~~~~~~~ 205 (284)
T cd07836 144 FGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT-GRPLFPGTN 205 (284)
T ss_pred cchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCC
Confidence 999986644322 23345788999997422 2 34566666 5555554 566776654
No 220
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94 E-value=2.8e-25 Score=203.38 Aligned_cols=184 Identities=16% Similarity=0.084 Sum_probs=141.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..+++.||+|.+.... ....+.+.+|+++++.++|+|+ +++++.+..++.+|+||||+
T Consensus 22 ~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 22 DGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYI--------VKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred CCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcE--------eeeEEEEEeCCeEEEEEecC
Confidence 4677899999999999999999997543 2345567889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ ++.+.......+ ....+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 92 ~~~~l~~~~~~~~~~l---~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~dlkp~Nili~~~~~~kl~ 152 (292)
T cd06644 92 PGGAVDAIMLELDRGL---TEPQIQVICRQMLEALQYLHSMK----------------IIHRDLKAGNVLLTLDGDIKLA 152 (292)
T ss_pred CCCcHHHHHHhhcCCC---CHHHHHHHHHHHHHHHHHHhcCC----------------eeecCCCcceEEEcCCCCEEEc
Confidence 998 443322222222 44556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc------ccCC-cceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK------LGGP-FVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~------~~~~-~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++....... .....++..|++||+.. ..++ .+|+|+ ++|+++ ++.+||...
T Consensus 153 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~~ 218 (292)
T cd06644 153 DFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHEL 218 (292)
T ss_pred cCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh-cCCCCCccc
Confidence 999987643332 23345778899999742 1123 456666 555654 556666443
No 221
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.5e-25 Score=204.31 Aligned_cols=185 Identities=14% Similarity=0.135 Sum_probs=145.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.+..+|+.||+|++..... ....+.+.+|+++++.++|||| +++++++...+.+|+||||+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 15 AGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYI--------VSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCc--------ceEeeeEecCCEEEEEEecC
Confidence 56788999999999999999999875443 3345678899999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ ++.+.... ..+ ....+..++.|++.||.|||+ .+ ++||||||+||++++++.++|
T Consensus 86 ~~~~L~~~~~~~-~~~---~~~~~~~~~~~i~~~l~~LH~~~~----------------i~H~dl~p~nil~~~~~~~~l 145 (284)
T cd06620 86 DCGSLDRIYKKG-GPI---PVEILGKIAVAVVEGLTYLYNVHR----------------IMHRDIKPSNILVNSRGQIKL 145 (284)
T ss_pred CCCCHHHHHHhc-cCC---CHHHHHHHHHHHHHHHHHHHHhcC----------------eeccCCCHHHEEECCCCcEEE
Confidence 988 54433221 122 445556777899999999997 57 999999999999999999999
Q ss_pred EecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++............|+..|++||+.. .. ...+|+|+ ++|++ .++..||....
T Consensus 146 ~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l-~tg~~p~~~~~ 206 (284)
T cd06620 146 CDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIEL-ALGKFPFAFSN 206 (284)
T ss_pred ccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHH-HhCCCCCcccc
Confidence 999999766544445567888999999743 22 34566666 45555 55666776544
No 222
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=1.7e-25 Score=201.37 Aligned_cols=185 Identities=15% Similarity=0.090 Sum_probs=137.1
Q ss_pred CCCceEEEeceeC--CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLK--PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~--~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++...||+|... .++..||+|++..... ....+.+.+|+.++++++|+|| +++++++. .+..++|||
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------i~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 5 SGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYI--------VRMIGVCE-AEALMLVME 74 (257)
T ss_pred CCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCe--------EEEEEEEc-CCCeEEEEE
Confidence 4567789988764 4566799999975533 3345678889999999999999 99999875 457899999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +..+....... .....++.++.|++.||.|||+++ ++||||||+||+++.++.+|
T Consensus 75 ~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlkp~nil~~~~~~~k 135 (257)
T cd05115 75 MASGGPLNKFLSGKKDE---ITVSNVVELMHQVSMGMKYLEGKN----------------FVHRDLAARNVLLVNQHYAK 135 (257)
T ss_pred eCCCCCHHHHHHhCCCC---CCHHHHHHHHHHHHHHHHHHHhcC----------------eeecccchheEEEcCCCcEE
Confidence 99888 54333322222 245666778889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCC---c--cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPH---A--SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 169 l~DFGla~~~~~~~~~---~--~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+|||++......... . ..++..|++||... .. +..+|+|+ ++|+++..+..||...
T Consensus 136 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 136 ISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred eccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 9999999865443211 1 12245789999743 22 44567777 6777776677776543
No 223
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=1.9e-26 Score=215.49 Aligned_cols=187 Identities=19% Similarity=0.194 Sum_probs=142.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec----CCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE----PNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~----~~~~~iv 87 (334)
.++.+.||++.++.+|+.||+|.+..........+.+.+|+.+++.++|||| +++++++.. ...+|+|
T Consensus 15 ~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 15 SGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI--------IAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred cCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCc--------cCHHHhccccCCCCceEEEE
Confidence 4677899999999999999999998655433445667789999999999999 998887763 3568999
Q ss_pred EEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 88 GVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 88 mEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|||+.|++..+.... .. .....+..++.|++.||.|||+++ ++||||||+||++++++.+
T Consensus 87 ~e~~~~~l~~~~~~~-~~---~~~~~~~~i~~qi~~aL~~LH~~~----------------ivH~dlkp~Nil~~~~~~~ 146 (334)
T cd07855 87 MDLMESDLHHIIHSD-QP---LTEEHIRYFLYQLLRGLKYIHSAN----------------VIHRDLKPSNLLVNEDCEL 146 (334)
T ss_pred EehhhhhHHHHhccC-CC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEEcCCCcE
Confidence 999988754443322 12 245556677789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCC------CccccCcccccccccc---ccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKP------HASVESDCILHGYIKK---LGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 168 kl~DFGla~~~~~~~~------~~~~~t~~~~~~~v~~---~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||+|||++........ ....++..|++||+.. .....+|+|+ ++++.+..+..||.+.+
T Consensus 147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 147 RIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred EecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 9999999986543321 2345788899999742 2244566676 44444466777886654
No 224
>KOG4645|consensus
Probab=99.94 E-value=1.5e-27 Score=241.99 Aligned_cols=223 Identities=17% Similarity=0.201 Sum_probs=162.5
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP 94 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~ 94 (334)
.++||-|.+..||...|+|.++-...+....+...+|..++..++|||+ |++|++-...+..+|.||||+||
T Consensus 1248 fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNl--------V~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1248 FGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNL--------VRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred eeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccc--------cccCceeecHHHHHHHHHHhccC
Confidence 4699999999999999999998777666667788899999999999999 99999999999999999999999
Q ss_pred -hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecc
Q psy6542 95 -KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLG 173 (334)
Q Consensus 95 -l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFG 173 (334)
+..+..+.. -. ++.-...+..|++.|+.|||+.| ||||||||+||+++.+|.+|++|||
T Consensus 1320 sLa~ll~~gr-i~---dE~vt~vyt~qll~gla~LH~~g----------------IVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1320 SLASLLEHGR-IE---DEMVTRVYTKQLLEGLAYLHEHG----------------IVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred cHHHHHHhcc-hh---hhhHHHHHHHHHHHHHHHHHhcC----------------ceecCCCccceeeecCCcEEeeccc
Confidence 555544431 11 22222334469999999999999 9999999999999999999999999
Q ss_pred cccccCCCC------CCccccCcccccccc----cccc-CCcceeeh--hHHHHHcCCCCCCCCCCCCCcccchh---cc
Q psy6542 174 LACDFSKKK------PHASVESDCILHGYI----KKLG-GPFVSAWQ--TRYAKLFPNRLELHPESGQSKPELIF---MD 237 (334)
Q Consensus 174 la~~~~~~~------~~~~~~t~~~~~~~v----~~~~-~~~~~~w~--~~~~~l~~~~~~~~~~~~~~~~~~i~---~~ 237 (334)
.|....... .....||+.||+||+ ...| ....|+|+ |+.-.|.+|+-||.-.+.. +.++. .+
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--~aIMy~V~~g 1457 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--WAIMYHVAAG 1457 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--hHHHhHHhcc
Confidence 998665442 245689999999998 2344 44555666 5544445555566554432 22221 12
Q ss_pred cccccccccccHhHHHHHHHhhccCchhhcC
Q psy6542 238 QIEEVSQDLITVKGEQCVQLKLTRDTRIVLT 268 (334)
Q Consensus 238 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~ 268 (334)
....+|..++ ..|++++..++..||..|.+
T Consensus 1458 h~Pq~P~~ls-~~g~dFle~Cl~~dP~~Rw~ 1487 (1509)
T KOG4645|consen 1458 HKPQIPERLS-SEGRDFLEHCLEQDPKMRWT 1487 (1509)
T ss_pred CCCCCchhhh-HhHHHHHHHHHhcCchhhhH
Confidence 2233333322 25666666666666666533
No 225
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=1.5e-25 Score=201.53 Aligned_cols=186 Identities=18% Similarity=0.155 Sum_probs=145.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||+|.+..+++.||||++.+... .....+.+.+|+.+++.++|||| +++++++.+++.+|++|||
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 3 VGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI--------VKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCE--------eeeeeeEEcCCccEEEEec
Confidence 35567899999999999999999987654 33355678899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +....... .. ........++.|++.||.|||+++ ++|+||+|+||++++++.++|
T Consensus 75 ~~~~~L~~~l~~~-~~---l~~~~~~~~~~~i~~~l~~lH~~~----------------~~h~dl~~~nilv~~~~~~~l 134 (262)
T cd05572 75 CLGGELWTILRDR-GL---FDEYTARFYIACVVLAFEYLHNRG----------------IIYRDLKPENLLLDSNGYVKL 134 (262)
T ss_pred CCCCcHHHHHhhc-CC---CCHHHHHHHHHHHHHHHHHHhhCC----------------cccCCCCHHHEEEcCCCCEEE
Confidence 9887 43332222 12 244555667789999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK-PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++....... .....+++.|++||+.. .....+|.|+ ++|+++ .+..||....
T Consensus 135 ~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~ 196 (262)
T cd05572 135 VDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL-TGRPPFGEDD 196 (262)
T ss_pred eeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH-hCCCCcCCCC
Confidence 9999998775542 23346788899999743 2245567777 556665 4566765544
No 226
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94 E-value=1.6e-25 Score=201.85 Aligned_cols=184 Identities=15% Similarity=0.116 Sum_probs=140.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc-------hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE-------SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~-------~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
.++.+.||+|.+..+++.||+|.+...... ....+.+.+|+++++.++|||| +++++++.+.+..
T Consensus 10 ~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~ 81 (267)
T cd06628 10 SGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI--------VQYLGSSLDADHL 81 (267)
T ss_pred cCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe--------eeEEEEEEeCCcc
Confidence 367889999999999999999998765431 1233567889999999999999 9999999999999
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+++|||++|+ +..+.... ..+ ....+..++.|++.||.|||+.+ ++||||+|+||++++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~l---~~~~~~~~~~~l~~~l~~lH~~~----------------ivH~di~p~nil~~~ 141 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY-GAF---EETLVRNFVRQILKGLNYLHNRG----------------IIHRDIKGANILVDN 141 (267)
T ss_pred EEEEEecCCCCHHHHHHhc-cCc---cHHHHHHHHHHHHHHHHHHHhcC----------------cccccCCHHHEEEcC
Confidence 9999999887 44333321 122 34455567789999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCC--------CCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKK--------PHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~--------~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++.++|+|||+++...... .....|+..|++||.... . ...+|+|+ ++|+++. +..||..
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~ 214 (267)
T cd06628 142 KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT-GKHPFPD 214 (267)
T ss_pred CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh-CCCCCCC
Confidence 9999999999998665321 112346778899997432 2 34566666 5556554 6667644
No 227
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=1.8e-25 Score=200.54 Aligned_cols=184 Identities=12% Similarity=0.113 Sum_probs=138.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++..+. +..+|+|.+...... ...+.+|+++++.++|||| +++++++..++.+|+||||+
T Consensus 14 ~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 14 SGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKL--------VQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred CCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCc--------eeEEEEEccCCCEEEEEEcC
Confidence 46667899998765 568999998754432 2356779999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +.......... ......+.++.|++.||.|||+++ ++||||||+||++++++.+||+
T Consensus 82 ~~~~L~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~ni~i~~~~~~kl~ 142 (256)
T cd05114 82 ENGCLLNYLRQRQGK---LSKDMLLSMCQDVCEGMEYLERNS----------------FIHRDLAARNCLVSSTGVVKVS 142 (256)
T ss_pred CCCcHHHHHHhCccC---CCHHHHHHHHHHHHHHHHHHHHCC----------------ccccccCcceEEEcCCCeEEEC
Confidence 988 43332221112 244556777889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCc---cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHA---SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~~~---~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||+++......... ..++..|++||+.. .. ...+|+|+ ++|++++.+..||...+
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~ 206 (256)
T cd05114 143 DFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206 (256)
T ss_pred CCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 999998654333221 22345789999743 22 44566666 67777765777775443
No 228
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.94 E-value=2.6e-26 Score=209.13 Aligned_cols=186 Identities=19% Similarity=0.207 Sum_probs=145.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+++.||||.++.........+.+.+|+++++.++|+|| +++++++..++.+|+||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~iv~e~~ 82 (288)
T cd07833 11 EGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI--------VNLKEAFRRKGRLYLVFEYV 82 (288)
T ss_pred ccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe--------eehhheEEECCEEEEEEecC
Confidence 4567789999999999999999998665544456678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ ++.+.... ..+ ....++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+
T Consensus 83 ~~~~l~~~~~~~-~~~---~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~dl~~~ni~~~~~~~~kl~ 142 (288)
T cd07833 83 ERTLLELLEASP-GGL---PPDAVRSYIWQLLQAIAYCHSHN----------------IIHRDIKPENILVSESGVLKLC 142 (288)
T ss_pred CCCHHHHHHhcC-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHeEECCCCCEEEE
Confidence 998 43332221 222 45556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC---CCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK---PHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++....... .....++..|++||+... . ...+|+|+ ++|++ ..+.+||.+.+
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l-~~g~~~~~~~~ 206 (288)
T cd07833 143 DFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAEL-LDGEPLFPGDS 206 (288)
T ss_pred eeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHH-HhCCCCCCCCC
Confidence 999998765543 223456788999998422 2 34566676 45555 55666775543
No 229
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94 E-value=1.8e-25 Score=200.93 Aligned_cols=182 Identities=15% Similarity=0.087 Sum_probs=137.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||+|... +++.||+|.+..... ..+.+.+|+.+++.++|+|| +++++.+..++..|++|||+
T Consensus 16 ~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 16 AGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKL--------VRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred CcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCe--------eeEEEEEcCCCCcEEEEecC
Confidence 4667789999865 467899999875433 24567889999999999999 99999999999999999999
Q ss_pred CCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.|+ +. ++....... ......+.++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~~~L~~~l~~~~~~~---~~~~~~~~~~~~l~~~l~~LH~~~----------------i~H~dl~p~nili~~~~~~~l 144 (261)
T cd05072 84 AKGSLLDFLKSDEGGK---VLLPKLIDFSAQIAEGMAYIERKN----------------YIHRDLRAANVLVSESLMCKI 144 (261)
T ss_pred CCCcHHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eeccccchhhEEecCCCcEEE
Confidence 887 43 332222112 244456677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCC---ccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPH---ASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~~~---~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||+++........ ...++..|++||.... ....+|+|+ ++|+++..+..||..
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 145 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred CCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 999999876543321 2233567899987432 234566666 667776657777644
No 230
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=3.5e-25 Score=200.85 Aligned_cols=185 Identities=16% Similarity=0.153 Sum_probs=143.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC---CCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR---NEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~---h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++...||+|.+..+|+.||||.++...... ....+.+|+++++.++ |||+ +++++++..+..+|+|
T Consensus 10 ~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~v--------i~~~~~~~~~~~~~lv 80 (277)
T cd06917 10 GRGAYGAVYRGKHVPTGRVVALKIINLDTPDD-DVSDIQREVALLSQLRQSQPPNI--------TKYYGSYLKGPRLWII 80 (277)
T ss_pred eccCCceEEEEEEcCCCcEEEEEEecCCCCch-hHHHHHHHHHHHHHhccCCCCCe--------eeEeeeeeeCCEEEEE
Confidence 35677899999999999999999997654322 3346778999999997 9999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.|+ +..+.... .......+.++.|++.||.|||+.+ ++|+||+|+||++++++.
T Consensus 81 ~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~~----------------i~H~dl~p~ni~i~~~~~ 139 (277)
T cd06917 81 MEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKVG----------------VIHRDIKAANILVTNTGN 139 (277)
T ss_pred EecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhCC----------------cccCCcCHHHEEEcCCCC
Confidence 9999888 44333221 2245566677889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCC--CCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKK--PHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 167 vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
++|+|||++....... .....|+..|++||.... . ...+|+|+ ++|+++. +..||.+..
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~-g~~p~~~~~ 206 (277)
T cd06917 140 VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT-GNPPYSDVD 206 (277)
T ss_pred EEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHh-CCCCCCCCC
Confidence 9999999998665443 233467888999997532 2 34566666 5566655 666775543
No 231
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94 E-value=1.5e-25 Score=202.45 Aligned_cols=185 Identities=14% Similarity=0.070 Sum_probs=138.6
Q ss_pred CCCceEEEeceeCCCCC---cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGF---PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~---~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
++..+.||+|.++.++. .||+|.++....+ ...+.+..|+.+++.++|||| +++++++..++..|+||
T Consensus 14 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 14 AGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNI--------IHLEGVVTKSKPVMIVT 84 (267)
T ss_pred ccCCCceEEEEEecCCCCceEEEEEECCCCCCH-HHHHHHHHHHHHHHhCCCCCc--------ceEEEEEecCCccEEEE
Confidence 45567899998875544 7999998764432 234578889999999999999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ +..+.......+ .....+.++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 85 e~~~~~~L~~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lH~~~----------------i~h~dlkp~nili~~~~~~ 145 (267)
T cd05066 85 EYMENGSLDAFLRKHDGQF---TVIQLVGMLRGIASGMKYLSDMG----------------YVHRDLAARNILVNSNLVC 145 (267)
T ss_pred EcCCCCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeehhhchhcEEECCCCeE
Confidence 999987 443333222222 44556677889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCCCc-----cccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHA-----SVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~-----~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|+|||++.......... ..++..|++||... .....+|+|+ ++|+++..+..||..
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 146 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred EeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence 999999998765433211 11245688888753 2344666676 667767656667644
No 232
>KOG0607|consensus
Probab=99.94 E-value=2e-26 Score=204.35 Aligned_cols=221 Identities=15% Similarity=0.193 Sum_probs=162.0
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEccCCC-
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP- 94 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~- 94 (334)
+|--|.+..||+.+|||++.+... ..+.+..+|++++.+++ |+|| +++.++|+++..+|+|||-+.||
T Consensus 93 sVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~ni--------lqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 93 SVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNI--------LQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred eeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccH--------HHHHHHhcccceEEEEEecccCch
Confidence 788899999999999999998743 34567888999999985 9999 99999999999999999999999
Q ss_pred -hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC---EEEE
Q psy6542 95 -KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH---VRIS 170 (334)
Q Consensus 95 -l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~---vkl~ 170 (334)
+.+|..+. .+.+..+..+.. .|+.||.|||++| |.||||||+|||-.+.++ ||||
T Consensus 163 lLshI~~~~--~F~E~EAs~vvk---dia~aLdFlH~kg----------------IAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 163 LLSHIQKRK--HFNEREASRVVK---DIASALDFLHTKG----------------IAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred HHHHHHHhh--hccHHHHHHHHH---HHHHHHHHHhhcC----------------cccccCCccceeecCCCCcCceeee
Confidence 66665544 566655555544 9999999999999 999999999999976654 8999
Q ss_pred ecccccccCCC---------CCCccccCccccccccc------cccCCccee-eh--hHHHHHcCCCCCCCCCCCCC---
Q psy6542 171 DLGLACDFSKK---------KPHASVESDCILHGYIK------KLGGPFVSA-WQ--TRYAKLFPNRLELHPESGQS--- 229 (334)
Q Consensus 171 DFGla~~~~~~---------~~~~~~~t~~~~~~~v~------~~~~~~~~~-w~--~~~~~l~~~~~~~~~~~~~~--- 229 (334)
||.|+...... ...+.+|+..||+|||- ...|.+..| |+ ++.+.|..+-+||.|.-...
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 99998643221 12456788899999982 233666555 55 45555566677887654311
Q ss_pred ------------cccchhcccccccccccccH---hHHHHHHHhhccCchhhcCC
Q psy6542 230 ------------KPELIFMDQIEEVSQDLITV---KGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 230 ------------~~~~i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~p~~r~~~ 269 (334)
.++.| .+..+++|..-|-- ..++.+...+.+|+..|+..
T Consensus 302 drGe~Cr~CQ~~LFesI-QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESI-QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred cCCCccHHHHHHHHHHH-hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh
Confidence 22222 23344455444432 44556666677888877764
No 233
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=1.8e-25 Score=205.39 Aligned_cols=184 Identities=14% Similarity=0.155 Sum_probs=143.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||++.+..+++.||||.+....... ...+.+|+.+++.++|+|+ +++++.+..+...|+||||
T Consensus 29 g~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~e~~~l~~~~h~~v--------~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI--------VNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cCCCCeEEEEEEECCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhCCCCCE--------eeEEEEEEeCCEEEEeecc
Confidence 45677899999999999999999998655432 3557789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.... .+ .....+.++.|++.||.|||+.+ |+||||||+||+++.++.++|
T Consensus 99 ~~~~~L~~~~~~~--~~---~~~~~~~i~~ql~~aL~~LH~~g----------------i~H~dLkp~Nill~~~~~~kl 157 (296)
T cd06654 99 LAGGSLTDVVTET--CM---DEGQIAAVCRECLQALEFLHSNQ----------------VIHRDIKSDNILLGMDGSVKL 157 (296)
T ss_pred cCCCCHHHHHHhc--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEEcCCCCEEE
Confidence 9988 44333221 12 34455677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++....... .....+++.|++||.... .+..+|+|+ ++|++ ..+..||....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l-~~g~~pf~~~~ 220 (296)
T cd06654 158 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM-IEGEPPYLNEN 220 (296)
T ss_pred CccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHH-HhCCCCCCCCC
Confidence 9999998654432 223467888999997432 245667777 45555 55666775543
No 234
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94 E-value=1.8e-25 Score=204.61 Aligned_cols=189 Identities=12% Similarity=0.035 Sum_probs=140.4
Q ss_pred CCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++.+.||++... .++..||+|.++.... ...+.+.+|+++++.++|+|| +++++++..++..++
T Consensus 15 ~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~l 84 (291)
T cd05094 15 EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHI--------VKFYGVCGDGDPLIM 84 (291)
T ss_pred ccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCc--------ceEEEEEccCCceEE
Confidence 3567889988753 4566799999874433 233567889999999999999 999999999999999
Q ss_pred EEEccCCC-hh-HHhhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 87 IGVRQSGP-KD-QISRSKIN-----------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 87 vmEy~~g~-l~-~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
||||++|+ +. ++...... ..........+.++.||+.||.|||+++ ++|||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~----------------i~H~d 148 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH----------------FVHRD 148 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeecc
Confidence 99999887 43 33222100 0011245566788889999999999999 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+||++++++.++|+|||+++....... ....++..|++||... .. ...+|+|+ ++|+++..+..||..
T Consensus 149 lkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 228 (291)
T cd05094 149 LATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 228 (291)
T ss_pred cCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999986544321 2234567899999742 22 44577777 667776657777655
Q ss_pred CC
Q psy6542 225 ES 226 (334)
Q Consensus 225 ~~ 226 (334)
.+
T Consensus 229 ~~ 230 (291)
T cd05094 229 LS 230 (291)
T ss_pred CC
Confidence 43
No 235
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=5.5e-25 Score=200.66 Aligned_cols=251 Identities=15% Similarity=0.073 Sum_probs=164.6
Q ss_pred CCCceEEEece----eCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEE
Q psy6542 12 RVSKWRVKPPS----LKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~----~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ 85 (334)
+++...||+|. .+.++..||+|.++...... ....+.+|+++++.++|||+ +++++++... ..++
T Consensus 14 ~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 14 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN-HIADLKKEIEILRNLYHENI--------VKYKGICTEDGGNGIK 84 (284)
T ss_pred CCCceeEEEEEEccCCCCccceEEEEEcCccccHH-HHHHHHHHHHHHHhCCCCCe--------eeeeeEEecCCCCceE
Confidence 45666898886 46789999999987654332 34568899999999999999 9999988865 5689
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||++|+ +..+....... ......+.++.|++.||.|||+++ ++||||||+||+++.+
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~---~~~~~~~~i~~~i~~aL~~lH~~g----------------i~H~dlkp~Nil~~~~ 145 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQICKGMDYLGSRQ----------------YVHRDLAARNVLVESE 145 (284)
T ss_pred EEEEccCCCCHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eeecccchheEEEcCC
Confidence 999999888 54443322112 244555677889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCC-----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccch
Q psy6542 165 GHVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELI 234 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i 234 (334)
+.++|+|||+++....... ....++..|++||+.. ..+..+|+|+ ++|++++... +..... ..
T Consensus 146 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~-~~~~~~------~~ 218 (284)
T cd05079 146 HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCD-SESSPM------TL 218 (284)
T ss_pred CCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCC-CCcccc------ch
Confidence 9999999999986654321 2234566788999743 2345677777 6667665332 211110 00
Q ss_pred hcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 235 FMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
......+...... .......+.. ....+.....+..+.+ +...|...+|..|+ +.++++.+..
T Consensus 219 ~~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~--li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 219 FLKMIGPTHGQMT----VTRLVRVLEE------GKRLPRPPNCPEEVYQ--LMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred hhhhccccccccc----HHHHHHHHHc------CccCCCCCCCCHHHHH--HHHHHccCCcccCcCHHHHHHHHHh
Confidence 0111100000111 0011111111 0011112334444445 88889999999999 8888888764
No 236
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=1.4e-25 Score=201.52 Aligned_cols=234 Identities=13% Similarity=0.025 Sum_probs=164.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++. +..||+|.+...... ....+..|+++++.++|+|| +++++++.+.+.+|+||||+
T Consensus 16 ~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 16 SGYFGEVWEGLWKN-RVRVAIKILKSDDLL--KQQDFQKEVQALKRLRHKHL--------ISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred cCCCccEEEeEecC-CCcEEEEeccccchh--hHHHHHHHHHHHhcCCCcch--------hheeeeEecCCCeEEEEeec
Confidence 46677999999988 999999998865432 23457789999999999999 99999999999999999999
Q ss_pred CCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+++ +. ++.......+ .....+.++.|++.||.|||+++ ++||||||+||++++++.+||
T Consensus 85 ~~~~L~~~~~~~~~~~~---~~~~~~~~~~~i~~al~~lH~~~----------------i~h~dl~~~nilv~~~~~~kl 145 (261)
T cd05148 85 EKGSLLAFLRSPEGQVL---PVASLIDMACQVAEGMAYLEEQN----------------SIHRDLAARNILVGEDLVCKV 145 (261)
T ss_pred ccCCHHHHHhcCCCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccccCcceEEEcCCceEEE
Confidence 987 43 3332222222 44556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccc
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEV 242 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (334)
+|||++........ ....++..|++||+.. .. ...+|+|+ ++|+++..+..||.+.+.......+
T Consensus 146 ~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~-------- 217 (261)
T cd05148 146 ADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-------- 217 (261)
T ss_pred ccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH--------
Confidence 99999987654432 2223456788999743 23 34556666 6667766678787554311111100
Q ss_pred ccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHH
Q psy6542 243 SQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMA 308 (334)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~ 308 (334)
... .+. +.....+.++.+ +..+|...+|..|| +.++++.|.
T Consensus 218 -----------------~~~--~~~----~~~~~~~~~~~~--~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 218 -----------------TAG--YRM----PCPAKCPQEIYK--IMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred -----------------HhC--CcC----CCCCCCCHHHHH--HHHHHcCCCchhCcCHHHHHHHHh
Confidence 000 001 111233344444 77788888888888 777777664
No 237
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=7.8e-26 Score=202.81 Aligned_cols=186 Identities=17% Similarity=0.168 Sum_probs=142.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||++.+..+|+.||+|++..... .....+.+.+|+++++.++|||+ +++++.+..++..|++|||
T Consensus 3 ~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 3 KGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV--------VKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch--------hHHHHheecCcEEEEEEec
Confidence 46778999999999999999999976544 23345578889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.... .. ......+.++.|++.||.|||+.+ ++|+||+|+||++++++.++|
T Consensus 75 ~~~~~L~~~l~~~-~~---~~~~~~~~i~~qi~~~L~~lH~~~----------------i~H~di~~~nil~~~~~~~~l 134 (265)
T cd05579 75 LPGGDLASLLENV-GS---LDEDVARIYIAEIVLALEYLHSNG----------------IIHRDLKPDNILIDSNGHLKL 134 (265)
T ss_pred CCCCcHHHHHHHc-CC---CCHHHHHHHHHHHHHHHHHHHHcC----------------eecCCCCHHHeEEcCCCCEEE
Confidence 9887 54443322 12 245556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCC----------CCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKK----------KPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~----------~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++...... ......++..|++||+... ....+|+|+ ++|++ ..+..||....
T Consensus 135 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l-~~g~~p~~~~~ 205 (265)
T cd05579 135 TDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEF-LVGIPPFHGET 205 (265)
T ss_pred EecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHH-HhCCCCCCCCC
Confidence 999998855433 1223456778899997432 233556666 45555 44566665443
No 238
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93 E-value=2.5e-25 Score=201.17 Aligned_cols=182 Identities=12% Similarity=0.119 Sum_probs=136.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecC------Ce
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEP------NS 83 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~------~~ 83 (334)
..++.+.||+|..+.+++.||||.+...... ...+..|+.+++.+ +|+|+ +++++++... ..
T Consensus 15 g~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i--------~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 15 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNI--------ATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred eecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCe--------eeEeeEEeecCCCCCCcE
Confidence 4567889999999999999999999765432 23566799999998 69999 9999998742 46
Q ss_pred EEEEEEccCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 84 HYIIGVRQSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
+|++|||+.++ +..+... ....+ .......++.|++.||.|||+++ |+||||||+||++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l---~~~~~~~~~~qi~~~l~~LH~~~----------------ivh~dl~~~nili 144 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTL---KEEWIAYICREILRGLSHLHQHK----------------VIHRDIKGQNVLL 144 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------CccCCCCHHHEEE
Confidence 89999999987 4333232 21222 34445667789999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCC--CCCccccCcccccccccc------ccCC-cceeeh---hHHHHHcCCCCCCC
Q psy6542 162 DEHGHVRISDLGLACDFSKK--KPHASVESDCILHGYIKK------LGGP-FVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~------~~~~-~~~~w~---~~~~~l~~~~~~~~ 223 (334)
++++.++|+|||++...... ......|+..|++||+.. ..++ .+|+|+ ++|+++. +..||.
T Consensus 145 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~-g~~p~~ 217 (272)
T cd06637 145 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPPLC 217 (272)
T ss_pred CCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh-CCCCcc
Confidence 99999999999999865433 233456788999999842 2233 466666 5666655 455653
No 239
>KOG0194|consensus
Probab=99.93 E-value=3.3e-26 Score=218.02 Aligned_cols=187 Identities=15% Similarity=0.039 Sum_probs=142.9
Q ss_pred CCCceEEEeceeCCCCC---c-EEEEEeeCCC-cchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGF---P-IQIGMLRHRP-HESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~---~-vAIK~l~~~~-~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+|-++.||++..+..+. . ||||..+... ......+.+.+|+++|++++|||| |++||+.....++||
T Consensus 167 eGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV--------Vr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 167 EGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV--------VRFYGVAVLEEPLML 238 (474)
T ss_pred cccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE--------EEEEEEEcCCCccEE
Confidence 46677899888876433 3 8999999643 345566788999999999999999 999999999999999
Q ss_pred EEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 87 IGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 87 vmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
|||+|.|| .+++..... .. ....-+.++++.+.||+|||+++ +|||||-..|+|++.+
T Consensus 239 vmEl~~gGsL~~~L~k~~~-~v---~~~ek~~~~~~AA~Gl~YLh~k~----------------~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKK-SL---PTLEKLRFCYDAARGLEYLHSKN----------------CIHRDIAARNCLYSKK 298 (474)
T ss_pred EEEecCCCcHHHHHHhCCC-CC---CHHHHHHHHHHHHhHHHHHHHCC----------------CcchhHhHHHheecCC
Confidence 99999999 455544331 12 34444567789999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCCCc-cc-cCcccccccccccc-C-Ccceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKPHA-SV-ESDCILHGYIKKLG-G-PFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~~~-~~-~t~~~~~~~v~~~~-~-~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.+||+||||++.-....... .. -...|++||....+ | ..+|+|+ ++||.+..+..||.+..
T Consensus 299 ~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~ 367 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK 367 (474)
T ss_pred CeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC
Confidence 999999999998654222111 11 24678889975433 4 5666666 67777776666776655
No 240
>KOG0669|consensus
Probab=99.93 E-value=7.7e-28 Score=207.16 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=144.3
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--------CCeEEE
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--------PNSHYI 86 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--------~~~~~i 86 (334)
...|++|+++.+|+.||+|.+-........-....+|+.+|+.|+|+|+ +.+...+.+ ...+|+
T Consensus 30 fgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv--------~nliEic~tk~Tp~~r~r~t~yl 101 (376)
T KOG0669|consen 30 FGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENV--------VNLIEICRTKATPTNRDRATFYL 101 (376)
T ss_pred HHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhH--------HHHHHHHhhccCCcccccceeee
Confidence 3479999999999999999876544433334445669999999999998 655544432 235899
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||++|+.++.-+......+++....+.++. ++.+||.|+|... |+|||+|++|+||+.+|.
T Consensus 102 Vf~~cehDLaGlLsn~~vr~sls~Ikk~Mk---~Lm~GL~~iHr~k----------------ilHRDmKaaNvLIt~dgi 162 (376)
T KOG0669|consen 102 VFDFCEHDLAGLLSNRKVRFSLSEIKKVMK---GLMNGLYYIHRNK----------------ILHRDMKAANVLITKDGI 162 (376)
T ss_pred eHHHhhhhHHHHhcCccccccHHHHHHHHH---HHHHHHHHHHHhh----------------HHhhcccHhhEEEcCCce
Confidence 999999997777676666776656655555 9999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCcc------ccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKPHAS------VESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESGQS 229 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~~------~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~~~ 229 (334)
+||+|||+|+.+........ .-|.+|.+||.. +.++++-|+|. |+...|+++.+-+.+.+...
T Consensus 163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq 236 (376)
T KOG0669|consen 163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ 236 (376)
T ss_pred EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH
Confidence 99999999987765543222 238899999974 23344555555 88888888888887777543
No 241
>KOG1035|consensus
Probab=99.93 E-value=3.1e-26 Score=231.46 Aligned_cols=178 Identities=20% Similarity=0.172 Sum_probs=138.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-----------
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE----------- 80 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~----------- 80 (334)
||+.+.||+++++-+|+.||||.|.... .........+|+.++++|+|||| |++|..+.+
T Consensus 489 kGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNV--------VRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 489 KGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNV--------VRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred CCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcce--------eeeehhhhccCCcccccccc
Confidence 7899999999999999999999999887 44455667789999999999999 666654410
Q ss_pred --------------------------------------------------------------------------------
Q psy6542 81 -------------------------------------------------------------------------------- 80 (334)
Q Consensus 81 -------------------------------------------------------------------------------- 80 (334)
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence
Q ss_pred --------------------C--------CeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy6542 81 --------------------P--------NSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSA 131 (334)
Q Consensus 81 --------------------~--------~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~ 131 (334)
. ..+||-||||+.. +..++.... .. .....+|.++.||+.||.|+|++
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-~~--~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-FN--SQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-cc--hhhHHHHHHHHHHHHHHHHHHhC
Confidence 0 2369999999999 444444322 11 15677899999999999999999
Q ss_pred CCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccC-------------------CC-CCCccccCcc
Q psy6542 132 LNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFS-------------------KK-KPHASVESDC 191 (334)
Q Consensus 132 ~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~-------------------~~-~~~~~~~t~~ 191 (334)
| ||||||||.||++++++.|||+|||+|+... .. ...+..||..
T Consensus 717 g----------------iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTal 780 (1351)
T KOG1035|consen 717 G----------------IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTAL 780 (1351)
T ss_pred c----------------eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceee
Confidence 9 9999999999999999999999999998621 00 1234578999
Q ss_pred cccccccc--c--cCC-cceeeh---hHHHHHcC
Q psy6542 192 ILHGYIKK--L--GGP-FVSAWQ---TRYAKLFP 217 (334)
Q Consensus 192 ~~~~~v~~--~--~~~-~~~~w~---~~~~~l~~ 217 (334)
|++||+.. . .|. +.|+.+ ++|||+.+
T Consensus 781 YvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 781 YVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred eecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence 99999832 1 244 455555 66777664
No 242
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.93 E-value=4.9e-26 Score=213.02 Aligned_cols=186 Identities=21% Similarity=0.168 Sum_probs=141.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-----CeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-----NSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-----~~~~i 86 (334)
+++...||+|.+..+|+.||||.++.........+.+.+|+.+++.++|+|| +++++++... ..+|+
T Consensus 15 ~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--------~~~~~~~~~~~~~~~~~~~l 86 (337)
T cd07858 15 RGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENV--------IAIKDIMPPPHREAFNDVYI 86 (337)
T ss_pred cCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCc--------cchHHheecccccccCcEEE
Confidence 4667899999999999999999998654433334566789999999999999 9999887644 35899
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||||+.+++....... ..+ .......++.|++.||.|||+++ ++||||||+||+++.++.
T Consensus 87 v~e~~~~~L~~~~~~~-~~l---~~~~~~~i~~qi~~aL~~LH~~~----------------i~H~dlkp~Nil~~~~~~ 146 (337)
T cd07858 87 VYELMDTDLHQIIRSS-QTL---SDDHCQYFLYQLLRGLKYIHSAN----------------VLHRDLKPSNLLLNANCD 146 (337)
T ss_pred EEeCCCCCHHHHHhcC-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EecCCCCHHHEEEcCCCC
Confidence 9999988754332221 222 45556677889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCC--CCccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKK--PHASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 167 vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+||+|||+++...... .....++..|++||+.. .....+|+|+ ++|++ .++.+||.+.+
T Consensus 147 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l-~~g~~pf~~~~ 213 (337)
T cd07858 147 LKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAEL-LGRKPLFPGKD 213 (337)
T ss_pred EEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHH-HcCCCCCCCCC
Confidence 9999999998664432 23345678899999743 2345666666 45555 56677776543
No 243
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=2.1e-25 Score=200.24 Aligned_cols=235 Identities=11% Similarity=0.024 Sum_probs=163.2
Q ss_pred CCCceEEEeceeCCCC---CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLG---FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~---~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+++.+.||+|....++ ..||+|.+...... ...+.+.+|+++++.++|+|+ +++++++. .+.+++||
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~-~~~~~~v~ 74 (257)
T cd05060 5 HGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCI--------VRLIGVCK-GEPLMLVM 74 (257)
T ss_pred ccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCe--------eeEEEEEc-CCceEEEE
Confidence 4778899999876655 78999999866554 344567889999999999999 99999876 45689999
Q ss_pred EccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 89 VRQSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 89 Ey~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||+.++ + +++.... .......+.++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 75 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~~~----------------i~H~di~p~nili~~~~~ 133 (257)
T cd05060 75 ELAPLGPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLESKH----------------FVHRDLAARNVLLVNRHQ 133 (257)
T ss_pred EeCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcC----------------eeccCcccceEEEcCCCc
Confidence 999887 4 3332222 2245566778889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCc-----cccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhc
Q psy6542 167 VRISDLGLACDFSKKKPHA-----SVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFM 236 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~-----~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~ 236 (334)
+||+|||+++......... ..++..|++||... .....+|+|+ ++|+++..+.+||...+.. +.
T Consensus 134 ~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~--- 207 (257)
T cd05060 134 AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EV--- 207 (257)
T ss_pred EEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HH---
Confidence 9999999998665443211 11234688898743 2244667777 6677766577776433210 00
Q ss_pred ccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHHH
Q psy6542 237 DQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMARK 310 (334)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~~ 310 (334)
........ +. +.....+..+.+ +..+|...+|..|| +.++++.+.+.
T Consensus 208 ------------------~~~~~~~~---~~----~~~~~~~~~l~~--li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 208 ------------------IAMLESGE---RL----PRPEECPQEIYS--IMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ------------------HHHHHcCC---cC----CCCCCCCHHHHH--HHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 00000000 00 111233344445 77888888899999 77777777653
No 244
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93 E-value=2.9e-25 Score=199.26 Aligned_cols=185 Identities=14% Similarity=0.108 Sum_probs=144.1
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++.+.||+|.+..+++.+|+|.+.....+ ..+.+.+|+++++.++|||+ +++++++.+++.+|++|||
T Consensus 12 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 12 GSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNI--------VAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCCh--------hceEEEEEeCCEEEEEEeC
Confidence 4677889999999999999999999865443 34567889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.......+ ....++.++.|++.||.|||+.+ ++|+||||+||++++++.++|
T Consensus 82 ~~~~~l~~~~~~~~~~l---~~~~~~~~~~ql~~~l~~lh~~~----------------i~h~dl~p~ni~i~~~~~~~l 142 (262)
T cd06613 82 CGGGSLQDIYQVTRGPL---SELQIAYVCRETLKGLAYLHETG----------------KIHRDIKGANILLTEDGDVKL 142 (262)
T ss_pred CCCCcHHHHHHhhccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------ceecCCChhhEEECCCCCEEE
Confidence 9988 544433221233 44556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++....... .....++..|++||+.. .....+|+|+ ++|+++ ++.+||...
T Consensus 143 ~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~-tg~~p~~~~ 207 (262)
T cd06613 143 ADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELA-ELQPPMFDL 207 (262)
T ss_pred CccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHH-hCCCCCCCC
Confidence 9999998665432 23345778899999742 2234566666 555554 456666543
No 245
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.93 E-value=1.5e-25 Score=204.88 Aligned_cols=185 Identities=15% Similarity=0.087 Sum_probs=140.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.++.+|+.||||.+.....+. ....+.+|+++++.++|+|| +++++++..++..|+||||+
T Consensus 15 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~e~~~l~~l~h~ni--------~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 15 EGSYATVYKGISRINGQLVALKVISMKTEEG-VPFTAIREASLLKGLKHANI--------VLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred ecCCEEEEEEEEcCCCcEEEEEEecccCcCC-CcHHHHHHHHHHHhcCCCCE--------eEEEEEEecCCeEEEEEecc
Confidence 4566799999999999999999997654322 23355679999999999999 99999999999999999999
Q ss_pred CCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.+++ +.+.... ... .......++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 86 ~~~l~~~~~~~~-~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------i~H~dlkp~Nil~~~~~~~~l~ 145 (291)
T cd07870 86 HTDLAQYMIQHP-GGL---HPYNVRLFMFQLLRGLAYIHGQH----------------ILHRDLKPQNLLISYLGELKLA 145 (291)
T ss_pred cCCHHHHHHhCC-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCChHHEEEcCCCcEEEe
Confidence 8774 3332221 122 23344566779999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||+++...... .....++..|++||+... . ...+|+|+ ++|+++ ++..||.+.+
T Consensus 146 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~-~g~~~f~~~~ 208 (291)
T cd07870 146 DFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML-QGQPAFPGVS 208 (291)
T ss_pred ccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCch
Confidence 999998543322 233446788999997532 2 34566677 555554 5666776544
No 246
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93 E-value=9.9e-26 Score=205.84 Aligned_cols=240 Identities=10% Similarity=-0.012 Sum_probs=164.0
Q ss_pred CCCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 11 SRVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.+++...||+|.+. .++..||||.++.... ....+.+.+|+.++++++|||+ +++++++.+++.+|
T Consensus 14 g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i--------v~~~~~~~~~~~~~ 84 (288)
T cd05050 14 GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNI--------VKLLGVCAVGKPMC 84 (288)
T ss_pred cccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCch--------heEEEEEcCCCccE
Confidence 35677899999875 3788999999875433 3344568889999999999999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhhh------------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKIN------------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSV 146 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~------------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~ 146 (334)
++|||+.++ +......... ..........+.++.|++.||.|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-------------- 150 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-------------- 150 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--------------
Confidence 999999987 4333221110 0112244556778889999999999999
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcC
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFP 217 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~ 217 (334)
++||||||+||++++++.++|+|||++........ .....+..|++||+.. .. ...+|+|+ ++|+++..
T Consensus 151 --i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~ 228 (288)
T cd05050 151 --FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 228 (288)
T ss_pred --eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999986543321 1122345688898742 22 44566677 66776655
Q ss_pred CCCCCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhccccc
Q psy6542 218 NRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAH 297 (334)
Q Consensus 218 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 297 (334)
+..||.+.+.. + .+ ..+... .... .....+.++.+ +..||...+|..
T Consensus 229 ~~~p~~~~~~~---~---------------------~~-~~~~~~--~~~~----~~~~~~~~l~~--li~~~l~~~p~~ 275 (288)
T cd05050 229 GMQPYYGMAHE---E---------------------VI-YYVRDG--NVLS----CPDNCPLELYN--LMRLCWSKLPSD 275 (288)
T ss_pred CCCCCCCCCHH---H---------------------HH-HHHhcC--CCCC----CCCCCCHHHHH--HHHHHcccCccc
Confidence 65565433210 0 00 011000 0001 11223344455 888999999999
Q ss_pred ch-hHHHHHHHH
Q psy6542 298 KC-SQELLGSMA 308 (334)
Q Consensus 298 r~-~~~lL~~l~ 308 (334)
|+ +.++++.+.
T Consensus 276 Rpt~~el~~~l~ 287 (288)
T cd05050 276 RPSFASINRILQ 287 (288)
T ss_pred CCCHHHHHHHhh
Confidence 99 777777664
No 247
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=2.6e-25 Score=200.11 Aligned_cols=184 Identities=15% Similarity=0.058 Sum_probs=138.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.... ++.||||.++..... .+.+.+|+++++.++|+|+ +++++++..++..|++|||+
T Consensus 16 ~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 16 AGQFGEVWEGLWNN-TTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKL--------IQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred ccCCccEEEEEecC-CeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCc--------cceeEEEecCCCeeeeeecc
Confidence 45566899988654 578999999865432 3457789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +......... ..........++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 84 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~Nil~~~~~~~~l~ 145 (261)
T cd05068 84 KYGSLLEYLQGGAG--RALKLPQLIDMAAQVASGMAYLEAQN----------------YIHRDLAARNVLVGENNICKVA 145 (261)
T ss_pred cCCcHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeeccCCcceEEEcCCCCEEEC
Confidence 776 4333222110 11244556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCcccc---Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVE---SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~---t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||+++...........+ +..|++||+.. .....+|+|+ ++|+++..+..||.+.
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 208 (261)
T cd05068 146 DFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM 208 (261)
T ss_pred CcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 999998776443322222 34688999743 2244677777 6777777677777543
No 248
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93 E-value=2.5e-25 Score=202.33 Aligned_cols=185 Identities=15% Similarity=0.061 Sum_probs=137.1
Q ss_pred CCCCceEEEeceeCCCCCc----EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFP----IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~----vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
..++...||+|....+|.. ||+|+++.... ....+.+.+|+.+++.++|+|| +++++++... ..++
T Consensus 16 g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~-~~~l 85 (279)
T cd05109 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYV--------CRLLGICLTS-TVQL 85 (279)
T ss_pred CCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCC--------ceEEEEEcCC-CcEE
Confidence 4577889999998877774 89999875443 2334567889999999999999 9999988754 5789
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||+++| +..........+ .....+.++.|++.||.|||+++ ++||||||+|||+++++
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~---~~~~~~~~~~qi~~~L~~lH~~~----------------iiH~dlkp~Nil~~~~~ 146 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRI---GSQDLLNWCVQIAKGMSYLEEVR----------------LVHRDLAARNVLVKSPN 146 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccccccceEEEcCCC
Confidence 99999888 333322211122 44566777889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCC----ccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPH----ASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~----~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.+||+|||+++........ ...++..|++||... ..+ ..+|+|+ ++|+++..+..||..
T Consensus 147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999877544321 122356789999742 333 3556666 667777667777643
No 249
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93 E-value=4.2e-25 Score=201.27 Aligned_cols=185 Identities=15% Similarity=0.140 Sum_probs=137.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEee-----cCCeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTS-----EPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~-----~~~~~~ 85 (334)
+++...||+|.++.+++.||+|+++.... ....+.+|+.+++.+ +|||+ +++++++. .++.+|
T Consensus 28 ~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i--------~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 28 KGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNV--------VKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCe--------eeeeeeeeecccCCCCeEE
Confidence 55677999999999999999999875432 224566799999999 69999 99999874 446799
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||++|+ +..+...............+..++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlkp~nili~~~ 160 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK----------------TIHRDVKGNNILLTTE 160 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC----------------ccccCCCHHhEEECCC
Confidence 999999988 54433322211122345556677889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCC--CCccccCcccccccccc------cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKK--PHASVESDCILHGYIKK------LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~------~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+.++|+|||+++...... .....|+..|++||+.. .. ...+|+|+ ++|++ .++..|+..
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el-~~g~~p~~~ 231 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL-GDGDPPLAD 231 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHH-hcCCCCCCC
Confidence 999999999998664432 23346788999999742 12 33556666 44554 555656543
No 250
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.93 E-value=3e-25 Score=207.99 Aligned_cols=188 Identities=19% Similarity=0.064 Sum_probs=136.8
Q ss_pred CCCceEEEeceeC-----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeec-CCeE
Q psy6542 12 RVSKWRVKPPSLK-----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSE-PNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~-----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~-~~~~ 84 (334)
.++...||+|... .+++.||+|.++...... ..+.+..|+++++++ +|+|| +++++++.. +..+
T Consensus 17 ~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~-~~~~~~~E~~~~~~l~~h~ni--------v~~~~~~~~~~~~~ 87 (337)
T cd05054 17 RGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATAS-EYKALMTELKILIHIGHHLNV--------VNLLGACTKPGGPL 87 (337)
T ss_pred cCcCceEEeccccccccccccceeeeeeccCCCCHH-HHHHHHHHHHHHHhhccCcch--------hheeeeEecCCCCE
Confidence 4678899999744 456899999998554332 334567799999999 89999 999998764 4678
Q ss_pred EEEEEccCCC-hhHHhhhhhhh---------------------------------------------------------h
Q psy6542 85 YIIGVRQSGP-KDQISRSKINR---------------------------------------------------------Y 106 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~---------------------------------------------------------~ 106 (334)
+++|||++|+ ++.++...... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 9999999998 44332221100 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC---
Q psy6542 107 HKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP--- 183 (334)
Q Consensus 107 ~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~--- 183 (334)
.......+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++.+.....
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~----------------ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~ 231 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK----------------CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR 231 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh
Confidence 12245556778889999999999999 99999999999999999999999999987643321
Q ss_pred -CccccCccccccccc-cccC-Ccceeeh---hHHHHHcCCCCCCCC
Q psy6542 184 -HASVESDCILHGYIK-KLGG-PFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 184 -~~~~~t~~~~~~~v~-~~~~-~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
....++..|++||+. ...+ +.+|+|+ ++|+++..+..||.+
T Consensus 232 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 232 KGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred ccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 122345679999974 3334 4555565 666766657777654
No 251
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=2.7e-25 Score=204.98 Aligned_cols=186 Identities=12% Similarity=0.065 Sum_probs=141.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++...||++.++.+++.||||.+..... .......+.+|+++++.++|||| +++++.+..++.+|+||||
T Consensus 11 ~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 11 NGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV--------VSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred cCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe--------eeeEEEEecCCEEEEEEec
Confidence 46667899999999999999999986543 22334567789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+.... ... .......++.|++.||.|||+.+ ++||||||+||+++.++.++|
T Consensus 83 ~~g~~L~~~l~~~-~~~---~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~NIll~~~~~~~l 142 (305)
T cd05609 83 VEGGDCATLLKNI-GAL---PVDMARMYFAETVLALEYLHNYG----------------IVHRDLKPDNLLITSMGHIKL 142 (305)
T ss_pred CCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCchHHEEECCCCCEEE
Confidence 9988 54443332 122 44555667779999999999999 999999999999999999999
Q ss_pred EecccccccCCCC-----------------CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK-----------------PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~-----------------~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||+++...... .....++..|++||... ..+..+|+|+ ++|+++ ++..||.+..
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~-~g~~pf~~~~ 220 (305)
T cd05609 143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL-VGCVPFFGDT 220 (305)
T ss_pred eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999987421110 11234577788998742 3355677777 566655 4555765543
No 252
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=3.2e-25 Score=203.83 Aligned_cols=184 Identities=14% Similarity=0.161 Sum_probs=143.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||++.+..+|+.||||.+...... ..+.+.+|+.+++.++|||+ +++++++..++.+|+||||
T Consensus 28 g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 28 GQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNI--------VNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCce--------eeeeeeEecCceEEEEEEe
Confidence 3566779999999999999999999754432 23467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|+ +..+.... .+ ....+..++.|++.||.|||+.+ ++||||||+||+++.++.++|
T Consensus 98 ~~~~~L~~~~~~~--~l---~~~~~~~i~~~l~~al~~LH~~~----------------i~H~dL~p~Nili~~~~~~kl 156 (296)
T cd06655 98 LAGGSLTDVVTET--CM---DEAQIAAVCRECLQALEFLHANQ----------------VIHRDIKSDNVLLGMDGSVKL 156 (296)
T ss_pred cCCCcHHHHHHhc--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCCCEEE
Confidence 9988 54433321 22 44556677789999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....++..|++||... . ....+|+|+ ++|++++ +..||.+.+
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~llt-g~~pf~~~~ 219 (296)
T cd06655 157 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNEN 219 (296)
T ss_pred ccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Confidence 99999986654432 2345788899999743 2 245567777 5556554 566775543
No 253
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=2.6e-25 Score=199.86 Aligned_cols=184 Identities=16% Similarity=0.157 Sum_probs=136.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHH-HHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEI-FNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~i-l~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++...||+|.+..+|+.||||.+++... .......+..|..+ ....+|+|+ +++++++..++.+|+|||
T Consensus 6 ~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i--------~~~~~~~~~~~~~~lv~e 77 (260)
T cd05611 6 KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYV--------AKLYYSFQSKDYLYLVME 77 (260)
T ss_pred cCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCe--------eeeeeeEEcCCeEEEEEe
Confidence 45677999999999999999999976543 11122233445444 445689999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|++|+ +..+.... .. ........++.|++.||.|||+.+ ++||||+|+||++++++.++
T Consensus 78 ~~~~~~L~~~l~~~-~~---~~~~~~~~i~~qi~~aL~~lH~~~----------------i~H~dl~p~nil~~~~~~~~ 137 (260)
T cd05611 78 YLNGGDCASLIKTL-GG---LPEDWAKQYIAEVVLGVEDLHQRG----------------IIHRDIKPENLLIDQTGHLK 137 (260)
T ss_pred ccCCCCHHHHHHHc-CC---CCHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHeEECCCCcEE
Confidence 99988 54443321 12 245556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++..... .....++..|++||.... . +..+|+|+ ++|++ ..+..||....
T Consensus 138 l~dfg~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l-~~g~~p~~~~~ 197 (260)
T cd05611 138 LTDFGLSRNGLE--NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEF-LFGYPPFHAET 197 (260)
T ss_pred Eeecccceeccc--cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHH-HHCCCCCCCCC
Confidence 999999986544 223457788899997432 2 34555565 55555 45667775443
No 254
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=2.3e-25 Score=203.80 Aligned_cols=244 Identities=11% Similarity=0.013 Sum_probs=165.6
Q ss_pred CCCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 11 SRVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
..++...||+|.+.. ....||+|.+....... ....+.+|+++++.++|||| +++++.+..++..|
T Consensus 9 g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~ 79 (290)
T cd05045 9 GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS-ELRDLLSEFNLLKQVNHPHV--------IKLYGACSQDGPLL 79 (290)
T ss_pred cCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH-HHHHHHHHHHHHhhCCCCCE--------eeEEEEEecCCCcE
Confidence 456777899988653 33578999887654422 33568889999999999999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhhh--------------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcC
Q psy6542 86 IIGVRQSGP-KDQISRSKIN--------------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTL 144 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~--------------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~ 144 (334)
++|||+.|+ +..+...... .........++.++.|++.||.|||+.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------ 147 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK------------ 147 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC------------
Confidence 999999988 4333221100 0112345567788889999999999999
Q ss_pred CCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCccccccccc-cc-cCCcceeeh---hHHHHH
Q psy6542 145 SVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIK-KL-GGPFVSAWQ---TRYAKL 215 (334)
Q Consensus 145 ~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~-~~-~~~~~~~w~---~~~~~l 215 (334)
++||||||+||++++++.+||+|||+++....... ....++..|++||.. .. ....+|+|+ ++|+++
T Consensus 148 ----ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 223 (290)
T cd05045 148 ----LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223 (290)
T ss_pred ----eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999986543321 222345678888863 22 344567777 667776
Q ss_pred cCCCCCCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhccc
Q psy6542 216 FPNRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRS 295 (334)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 295 (334)
..+.+||.+.... . +....... .+.. .....+..+.+ +..+|...+|
T Consensus 224 t~g~~p~~~~~~~----------------~---------~~~~~~~~--~~~~----~~~~~~~~~~~--~i~~cl~~~P 270 (290)
T cd05045 224 TLGGNPYPGIAPE----------------R---------LFNLLKTG--YRME----RPENCSEEMYN--LMLTCWKQEP 270 (290)
T ss_pred hcCCCCCCCCCHH----------------H---------HHHHHhCC--CCCC----CCCCCCHHHHH--HHHHHccCCc
Confidence 6577776443210 0 00000000 0000 01122333444 7888888899
Q ss_pred ccch-hHHHHHHHHHHhC
Q psy6542 296 AHKC-SQELLGSMARKAG 312 (334)
Q Consensus 296 ~~r~-~~~lL~~l~~~~~ 312 (334)
..|+ ..++++.+.+..+
T Consensus 271 ~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 271 DKRPTFADISKELEKMMV 288 (290)
T ss_pred ccCCCHHHHHHHHHHHHh
Confidence 9999 7788777776543
No 255
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=6.1e-25 Score=202.02 Aligned_cols=183 Identities=14% Similarity=0.159 Sum_probs=141.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+|+.||||.+...... ....+.+|+.+++.++|+|+ +++++++..++.+|+||||+
T Consensus 29 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 29 QGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNI--------VNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCE--------eeEEEEEecCCEEEEeeccc
Confidence 456679999999999999999999865443 23457789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.... .. ....+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 99 ~~~~L~~~~~~~--~~---~~~~~~~~~~~l~~~L~~LH~~~----------------i~H~dL~p~Nili~~~~~~~l~ 157 (297)
T cd06656 99 AGGSLTDVVTET--CM---DEGQIAAVCRECLQALDFLHSNQ----------------VIHRDIKSDNILLGMDGSVKLT 157 (297)
T ss_pred CCCCHHHHHHhC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCCCEEEC
Confidence 988 43332221 12 34455677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++........ ....+++.|++||... .. ...+|+|+ ++|++ +.+..||.+.+
T Consensus 158 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l-~tg~~pf~~~~ 219 (297)
T cd06656 158 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM-VEGEPPYLNEN 219 (297)
T ss_pred cCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCC
Confidence 9999986544432 2345788899999743 22 34566676 44554 55677776544
No 256
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=5.3e-25 Score=196.81 Aligned_cols=187 Identities=17% Similarity=0.093 Sum_probs=143.8
Q ss_pred CCCCceEEEeceeCCCC----CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 11 SRVSKWRVKPPSLKPLG----FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~----~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
.+++.+.||++.+..++ ..||+|.++...... ..+.+..|+++++.++|+|+ +++++++.+.+..|+
T Consensus 8 g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~ 78 (258)
T smart00219 8 GEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNI--------VKLLGVCTEEEPLMI 78 (258)
T ss_pred ccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCch--------heEEEEEcCCCeeEE
Confidence 35778899999998877 999999997654432 44578889999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||++|+ +..+....... .......+.++.|++.||.|||+.+ ++||||||+||++++++
T Consensus 79 i~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~----------------~~h~dl~~~nil~~~~~ 140 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLESKN----------------FIHRDLAARNCLVGENL 140 (258)
T ss_pred EEeccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhcCC----------------eeecccccceEEEccCC
Confidence 99999887 43332222111 0355666778889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCCc---cccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHA---SVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~---~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.++|+|||+++......... ..++..|++||... .....+|+|+ ++|+++..+.+||..
T Consensus 141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~ 207 (258)
T smart00219 141 VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG 207 (258)
T ss_pred eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999998665542211 22567889998752 2344566677 566776667777654
No 257
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93 E-value=4.5e-25 Score=199.94 Aligned_cols=183 Identities=17% Similarity=0.107 Sum_probs=143.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|.+..+|+.||||.+....... ....+.+|+++++.++|+|+ +++++++.++..+|+|+||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 11 KGSFGEVYKAIDKRTNQVVAIKVIDLEEAED-EIEDIQQEIQFLSQCRSPYI--------TKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred CCCCeEEEEEEECCCCeEEEEEEeeccccch-HHHHHHHHHHHHHHcCCCCe--------eeeeEEEEECCeEEEEEEee
Confidence 5678899999999999999999998654322 33457789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +....... .......+.++.|++.||.|||+++ ++|+||+|+||++++++.++|+
T Consensus 82 ~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~~----------------i~h~dl~p~ni~i~~~~~~~l~ 140 (274)
T cd06609 82 GGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEEG----------------KIHRDIKAANILLSEEGDVKLA 140 (274)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHEEECCCCCEEEc
Confidence 988 43322221 2245556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||+++...... .....++..|++||.... ....+|+|+ ++|+++ ++.+||...
T Consensus 141 d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~-tg~~p~~~~ 201 (274)
T cd06609 141 DFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA-KGEPPLSDL 201 (274)
T ss_pred ccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH-hCCCCcccC
Confidence 999998776542 234567788999997432 244566666 555554 567777543
No 258
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=9.5e-26 Score=208.49 Aligned_cols=188 Identities=13% Similarity=0.083 Sum_probs=142.7
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
..++...||++.+..+|+.||||+++.........+.+.+|+++++.++|+|| +++++++..++..|++|||
T Consensus 9 ~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 9 CFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNI--------LPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred hhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcch--------hhhhheeecCCeEEEEEec
Confidence 33455678888888999999999998764444455678899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++++ ++.+... ....+ .......++.|++.||.|||+++ |+||||||+||+++.++.+|
T Consensus 81 ~~~~~l~~~l~~~~~~~~---~~~~~~~~~~~l~~~L~~LH~~~----------------ivH~dlk~~Nili~~~~~~k 141 (314)
T cd08216 81 MAYGSCEDLLKTHFPEGL---PELAIAFILKDVLNALDYIHSKG----------------FIHRSVKASHILLSGDGKVV 141 (314)
T ss_pred cCCCCHHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCcceEEEecCCceE
Confidence 9988 4333332 22222 34445567789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC---------CCccccCccccccccccc---c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK---------PHASVESDCILHGYIKKL---G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~---------~~~~~~t~~~~~~~v~~~---~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||.+....... .....++..|++||+... + .+.+|+|+ ++|++ ..+.+||....
T Consensus 142 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el-~~g~~pf~~~~ 214 (314)
T cd08216 142 LSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACEL-ANGHVPFKDMP 214 (314)
T ss_pred EecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHH-HhCCCCCCCCC
Confidence 99999987553221 122345677899998432 2 34567776 55565 55777876543
No 259
>PTZ00284 protein kinase; Provisional
Probab=99.93 E-value=8.9e-26 Score=220.54 Aligned_cols=188 Identities=18% Similarity=0.197 Sum_probs=134.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-CeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-NSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-~~~~ivmEy 90 (334)
+++...||+|.+..+++.||||+++.... .......|+++++.++|.++.. ...++++++++..+ +.+|+|||+
T Consensus 139 ~G~fg~V~~a~~~~~~~~vAvK~i~~~~~---~~~~~~~e~~~l~~l~~~~~~~--~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 139 EGTFGKVVEAWDRKRKEYCAVKIVRNVPK---YTRDAKIEIQFMEKVRQADPAD--RFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred eccCEEEEEEEEcCCCeEEEEEEEecchh---hHHHHHHHHHHHHHHhhcCccc--CcceeeeEEEEEcCCceEEEEEec
Confidence 56778999999999999999999975322 2234456888888887765311 11128888888754 579999999
Q ss_pred cCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC---
Q psy6542 91 QSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG--- 165 (334)
Q Consensus 91 ~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~--- 165 (334)
+.+++ +++... ..+ ....+..++.||+.||.|||+ .+ |+||||||+|||++.++
T Consensus 214 ~g~~l~~~l~~~--~~l---~~~~~~~i~~qi~~aL~yLH~~~g----------------IiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 214 YGPCLLDWIMKH--GPF---SHRHLAQIIFQTGVALDYFHTELH----------------LMHTDLKPENILMETSDTVV 272 (467)
T ss_pred cCCCHHHHHHHc--CCC---CHHHHHHHHHHHHHHHHHHHhcCC----------------eecCCCCHHHEEEecCCccc
Confidence 97774 444332 123 344556677899999999997 58 99999999999998765
Q ss_pred -------------CEEEEecccccccCCCCCCccccCcccccccccc-ccCCc-ceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 166 -------------HVRISDLGLACDFSKKKPHASVESDCILHGYIKK-LGGPF-VSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 166 -------------~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~~~~-~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
.+||+|||++...... ....+||..|++||+.. ..+.. +|+|+ ++|++ ..+.+||.+.+.
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~-~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el-ltG~~pf~~~~~ 350 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHS-RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL-YTGKLLYDTHDN 350 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccc-cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCCh
Confidence 4999999998654332 33467899999999843 33444 55555 45555 557788876653
No 260
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=2.7e-25 Score=199.21 Aligned_cols=185 Identities=16% Similarity=0.130 Sum_probs=141.1
Q ss_pred CCCCceEEEeceeCC-CCC--cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKP-LGF--PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~-~~~--~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++...||+|.+.. .++ .||||.++..... ...+.+.+|++++++++|||| +++++++.+ +.+++|
T Consensus 4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~-~~~~~v 73 (257)
T cd05040 4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENL--------IRLYGVVLT-HPLMMV 73 (257)
T ss_pred CccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCc--------cceeEEEcC-CeEEEE
Confidence 357788999998765 333 6899999876654 456678899999999999999 999999988 889999
Q ss_pred EEccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 88 GVRQSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 88 mEy~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
|||++++ + +.+..... .......++.++.|++.||.|||+++ ++||||||+||+++.++
T Consensus 74 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~----------------i~H~di~p~nil~~~~~ 134 (257)
T cd05040 74 TELAPLGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESKR----------------FIHRDLAARNILLASDD 134 (257)
T ss_pred EEecCCCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCC----------------ccccccCcccEEEecCC
Confidence 9999887 4 33322221 22356667778889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCC-----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.+||+|||+++.+..... ....++..|++||... .....+|+|+ ++|+++..+..||..
T Consensus 135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 135 KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999999987654321 1234567789999743 3344567777 667776646667543
No 261
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93 E-value=2.6e-25 Score=204.30 Aligned_cols=190 Identities=13% Similarity=0.048 Sum_probs=139.3
Q ss_pred CCCCceEEEeceeCCCCCc--EEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFP--IQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~--vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
..++..+||+|..+.++.. +|+|.++.... ....+.+.+|++++.++ +|||| +++++++...+.+|++
T Consensus 11 g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~i--------v~~~~~~~~~~~~~lv 81 (297)
T cd05089 11 GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS-ENDHRDFAGELEVLCKLGHHPNI--------INLLGACENRGYLYIA 81 (297)
T ss_pred cCCCcceEEEEEecCCCCcceeEEEEccccCC-HHHHHHHHHHHHHHHhhcCCCch--------hheEEEEccCCcceEE
Confidence 3577889999999887764 68888874332 22345678899999999 79999 9999999999999999
Q ss_pred EEccCCC-h-hHHhhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC
Q psy6542 88 GVRQSGP-K-DQISRSKINR-----------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL 154 (334)
Q Consensus 88 mEy~~g~-l-~~l~~~~~~~-----------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl 154 (334)
|||++++ + +++....... .........+.++.|++.||.|||+++ ++||||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~----------------ivH~dl 145 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ----------------FIHRDL 145 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCcC
Confidence 9999887 4 3443321100 012345566778889999999999999 999999
Q ss_pred CCCceeeCCCCCEEEEecccccccCCCCCCc-cccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 155 KPANILLDEHGHVRISDLGLACDFSKKKPHA-SVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 155 Kp~NiLl~~~~~vkl~DFGla~~~~~~~~~~-~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
||+|||++.++.+||+|||++.......... ...+..|++||+.. . .+..+|+|+ ++|+++..+.+||.+.
T Consensus 146 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~ 222 (297)
T cd05089 146 AARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM 222 (297)
T ss_pred CcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999987543222211 12245688998743 2 245667777 6777776577777543
No 262
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93 E-value=4.1e-25 Score=203.73 Aligned_cols=187 Identities=16% Similarity=0.037 Sum_probs=139.4
Q ss_pred CCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
+++...||++.+ ..++..||||.++..... ...+.+.+|+++++++ +|+|| +++++++..++.+|
T Consensus 45 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i--------v~~~~~~~~~~~~~ 115 (302)
T cd05055 45 AGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS-SEREALMSELKIMSHLGNHENI--------VNLLGACTIGGPIL 115 (302)
T ss_pred ccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh-HHHHHHHHHHHHHHhccCCCCc--------ceEEEEEecCCceE
Confidence 366678998864 445668999998865432 2345778899999999 79999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||+.++ +..+....... .......+.++.|++.||.|||+++ ++|+||||+|||++.+
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~----------------ivH~dlkp~Nil~~~~ 177 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRES--FLTLEDLLSFSYQVAKGMAFLASKN----------------CIHRDLAARNVLLTHG 177 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHCC----------------eehhhhccceEEEcCC
Confidence 999999987 43333321111 1245556677889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCCC----ccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKPH----ASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~~----~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+.++|+|||+++........ ...++..|++||+... ....+|+|+ ++|+++..+..||.+.
T Consensus 178 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~ 247 (302)
T cd05055 178 KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGM 247 (302)
T ss_pred CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence 99999999999866443221 2234677899997432 244566676 6677766577776543
No 263
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.93 E-value=3.8e-25 Score=200.90 Aligned_cols=181 Identities=15% Similarity=0.109 Sum_probs=141.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+....||+|.+..+++.||||.+....... ..+.+.+|+++++.++|||| +++++++..++.+|+||||+
T Consensus 14 ~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 14 KGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYI--------TRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred CCCCeeEEEEEEcCCCeEEEEEEeccccchH-HHHHHHHHHHHHHcCCCCcc--------HhhhcccccCCceEEEEEcc
Confidence 4667899999999999999999988554333 34578889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+... ..+ ....+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+
T Consensus 85 ~~~~L~~~~~~--~~~---~~~~~~~~~~~i~~~l~~lH~~~----------------ivH~dl~p~ni~i~~~~~~~l~ 143 (277)
T cd06642 85 GGGSALDLLKP--GPL---EETYIATILREILKGLDYLHSER----------------KIHRDIKAANVLLSEQGDVKLA 143 (277)
T ss_pred CCCcHHHHhhc--CCC---CHHHHHHHHHHHHHHHHHHhcCC----------------eeccCCChheEEEeCCCCEEEc
Confidence 988 4333221 122 44555677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|||++........ ....++..|++||.... ....+|+|+ ++|+++ ++..|+.
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-tg~~p~~ 202 (277)
T cd06642 144 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA-KGEPPNS 202 (277)
T ss_pred cccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHH-hCCCCCc
Confidence 9999986654332 23456788999997432 244677777 666665 4566654
No 264
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=5e-25 Score=201.75 Aligned_cols=186 Identities=12% Similarity=0.050 Sum_probs=139.2
Q ss_pred CCCceEEEeceeCCCC----------------CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEE
Q psy6542 12 RVSKWRVKPPSLKPLG----------------FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLY 75 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~----------------~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~ 75 (334)
+++.+.||+|.+..++ ..||+|.+...... ...+.+.+|+++++.++|||+ ++++
T Consensus 15 ~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~ 85 (296)
T cd05051 15 EGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNI--------ARLL 85 (296)
T ss_pred CCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCE--------eEEE
Confidence 5677789998877654 56899998865443 345578889999999999999 9999
Q ss_pred EEeecCCeEEEEEEccCCC-hhHHhhhhh-h------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCC
Q psy6542 76 KVTSEPNSHYIIGVRQSGP-KDQISRSKI-N------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVP 147 (334)
Q Consensus 76 ~~~~~~~~~~ivmEy~~g~-l~~l~~~~~-~------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~ 147 (334)
+++..++..+++|||+.++ +..+..... . .........++.++.|++.||.|||+.+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--------------- 150 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--------------- 150 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---------------
Confidence 9999999999999999887 433322211 0 0113356667778889999999999999
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcC-
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFP- 217 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~- 217 (334)
++||||||+||++++++.++|+|||+++....... ....++..|++||... .....+|+|+ ++|+++..
T Consensus 151 -i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 151 -FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred -ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 99999999999999999999999999986544321 1233466799999743 3355677777 66776653
Q ss_pred CCCCC
Q psy6542 218 NRLEL 222 (334)
Q Consensus 218 ~~~~~ 222 (334)
+..||
T Consensus 230 ~~~p~ 234 (296)
T cd05051 230 REQPY 234 (296)
T ss_pred CCCCC
Confidence 44454
No 265
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=2.3e-25 Score=199.75 Aligned_cols=232 Identities=16% Similarity=0.092 Sum_probs=162.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|... |+.||||.++.... ..+++.+|+.+++.++|+|+ +++++++.+.+..|+||||+
T Consensus 16 ~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 16 KGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNL--------VQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred cCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcce--------eeeEEEEcCCCCeEEEEEec
Confidence 4566799998764 78999999985543 35678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+...... ..........++.|++.||.|||+++ ++||||||+||+++.++.++|+
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~----------------i~H~di~p~Nili~~~~~~~l~ 144 (256)
T cd05039 83 AKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEKN----------------FVHRDLAARNVLVSEDLVAKVS 144 (256)
T ss_pred CCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC----------------ccchhcccceEEEeCCCCEEEc
Confidence 976 4433332211 12245556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccccccccc
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQD 245 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (334)
|||+++....... ....+..|++||... .....+|+|+ ++|+++..+..||...+..
T Consensus 145 d~g~~~~~~~~~~-~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------------- 206 (256)
T cd05039 145 DFGLAKEASQGQD-SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----------------- 206 (256)
T ss_pred ccccccccccccc-cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----------------
Confidence 9999987744333 223355688888643 2244567777 6677776577776332210
Q ss_pred cccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHH
Q psy6542 246 LITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMA 308 (334)
Q Consensus 246 ~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~ 308 (334)
.+......+. +. . .....++.+.+ +..++...+|..|+ +.++++.+.
T Consensus 207 --------~~~~~~~~~~--~~--~--~~~~~~~~~~~--li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 207 --------DVVPHVEKGY--RM--E--APEGCPPEVYK--VMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred --------HHHHHHhcCC--CC--C--CccCCCHHHHH--HHHHHhccChhhCcCHHHHHHHHh
Confidence 0011111110 00 0 11223444555 77788888888888 888877764
No 266
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.93 E-value=3.3e-25 Score=199.16 Aligned_cols=182 Identities=16% Similarity=0.127 Sum_probs=137.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++.... +..||||.++..... ...+.+|+.++++++|||| +++++++.+++.+|+||||+
T Consensus 14 ~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 14 TGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKL--------VQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred CcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCe--------eeEEEEEccCCCcEEEEEcC
Confidence 45667899997765 557999998854432 2357789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+....... .....++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+
T Consensus 82 ~~~~l~~~i~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~nili~~~~~~kl~ 142 (256)
T cd05113 82 SNGCLLNYLREHGKR---FQPSQLLEMCKDVCEGMAYLESKQ----------------FIHRDLAARNCLVDDQGCVKVS 142 (256)
T ss_pred CCCcHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eeccccCcceEEEcCCCCEEEC
Confidence 887 43332322112 255566778889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCc---cccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHA---SVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~~~---~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+++......... ..++..|++||+.. .....+|+|+ ++|+++..+..||..
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 204 (256)
T cd05113 143 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER 204 (256)
T ss_pred CCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 999998664443222 22345689999853 2345677777 667776656667643
No 267
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=3.1e-25 Score=198.76 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=137.1
Q ss_pred CCCceEEEeceeCCCC----------CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC
Q psy6542 12 RVSKWRVKPPSLKPLG----------FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP 81 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~----------~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~ 81 (334)
+++...||++.+..++ ..||+|.+...... ...+.+|+.+++.++|||| +++++++..
T Consensus 5 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~- 72 (259)
T cd05037 5 QGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHL--------VKLYGVCVR- 72 (259)
T ss_pred ccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcch--------hheeeEEec-
Confidence 5677899999998877 45788877644322 4677889999999999999 999999887
Q ss_pred CeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 82 NSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 82 ~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
+..++||||+.++ ++.+.......+ .....+.++.|++.||.|||+++ |+||||||+||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~dlkp~Nil 133 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNV---SLHWKLDVAKQLASALHYLEDKK----------------LVHGNVCGKNIL 133 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCC---CHHHHHHHHHHHHHHHHHHhhCC----------------eecccCccceEE
Confidence 7789999999998 544433322122 44456677889999999999999 999999999999
Q ss_pred eCCCC-------CEEEEecccccccCCCCCCccccCccccccccccc----cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 161 LDEHG-------HVRISDLGLACDFSKKKPHASVESDCILHGYIKKL----GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 161 l~~~~-------~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~----~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
++.++ .+||+|||++...... ....++..|++||+... ....+|+|+ ++|++++++..|+...
T Consensus 134 l~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 134 VARYGLNEGYVPFIKLSDPGIPITVLSR--EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred EecCccccCCceeEEeCCCCcccccccc--cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 99888 7999999999866542 22345567889997432 244566676 6777777666665443
No 268
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93 E-value=1.9e-25 Score=201.02 Aligned_cols=186 Identities=17% Similarity=0.213 Sum_probs=144.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||++.++.+++.||+|.+.....+ ...+.+.+|+++++.++|||| +++++++..++.+|++|||
T Consensus 10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 10 GAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYI--------VGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCch--------hhhheeeecCCEEEEEEEe
Confidence 3467778999999999999999999876543 345567789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.|+ +..+.......+ .......++.|++.||.|||+ .+ ++|+||||+||++++++.++
T Consensus 81 ~~~~~L~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~~----------------i~H~dl~~~ni~~~~~~~~~ 141 (265)
T cd06605 81 MDGGSLDKILKEVQGRI---PERILGKIAVAVLKGLTYLHEKHK----------------IIHRDVKPSNILVNSRGQIK 141 (265)
T ss_pred cCCCcHHHHHHHccCCC---CHHHHHHHHHHHHHHHHHHcCCCC----------------eecCCCCHHHEEECCCCCEE
Confidence 9977 544433221222 445556778899999999999 88 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+|||++............++..|++||... .. ...+|+|+ ++|+++ .+..||...
T Consensus 142 l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~-~g~~p~~~~ 202 (265)
T cd06605 142 LCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELA-TGRFPYPPE 202 (265)
T ss_pred EeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCcc
Confidence 9999999866544443466788899999742 22 34566666 455554 556666544
No 269
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=4.1e-25 Score=203.56 Aligned_cols=188 Identities=15% Similarity=0.084 Sum_probs=138.1
Q ss_pred CCCceEEEeceeC-------CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCe
Q psy6542 12 RVSKWRVKPPSLK-------PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~-------~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~ 83 (334)
.++.+.||+|... ..+..||+|.+...... ...+.+.+|+.+++.+ +|||| +++++++...+.
T Consensus 25 ~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i--------~~~~~~~~~~~~ 95 (304)
T cd05101 25 EGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHKNI--------INLLGACTQDGP 95 (304)
T ss_pred ccCCceEEEEEEeccCCCCCCcceeEEeeecccccch-HHHHHHHHHHHHHHhhccCCCc--------hheeEEEecCCc
Confidence 5778899999742 34567999998754332 2345678899999999 89999 999999999999
Q ss_pred EEEEEEccCCC-hhHHhhhhhh-h-----------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEE
Q psy6542 84 HYIIGVRQSGP-KDQISRSKIN-R-----------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLH 150 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~~~~-~-----------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ii 150 (334)
.|++|||+.++ +..+...... . ........++.++.|++.||.|||+++ ++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g----------------iv 159 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK----------------CI 159 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC----------------ee
Confidence 99999999887 4433222110 0 012244556777889999999999999 99
Q ss_pred eeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCC
Q psy6542 151 FRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 151 HrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~ 221 (334)
||||||+||+++.++.+||+|||+++....... ....++..|++||+.. .. ...+|+|+ ++|+++..+..|
T Consensus 160 H~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 239 (304)
T cd05101 160 HRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239 (304)
T ss_pred ecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999987654321 2223456789999743 22 34566666 677777656666
Q ss_pred CCC
Q psy6542 222 LHP 224 (334)
Q Consensus 222 ~~~ 224 (334)
|.+
T Consensus 240 ~~~ 242 (304)
T cd05101 240 YPG 242 (304)
T ss_pred ccc
Confidence 533
No 270
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93 E-value=4.1e-26 Score=207.77 Aligned_cols=187 Identities=21% Similarity=0.213 Sum_probs=144.8
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||+|.++.+|+.||+|.+..........+.+.+|+++++.++|||| +++++++.+++..|+||||
T Consensus 10 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 10 GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL--------VNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch--------hhHHHhcccCCeEEEEEec
Confidence 34667799999999999999999987655544455677889999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++++ ++.+.... ..+ .......++.|++.||.|||+.+ ++|+||+|+||++++++.++|
T Consensus 82 ~~~~~l~~~~~~~-~~~---~~~~~~~~~~~i~~~l~~LH~~~----------------i~h~~l~p~ni~~~~~~~~~l 141 (286)
T cd07846 82 VDHTVLDDLEKYP-NGL---DESRVRKYLFQILRGIEFCHSHN----------------IIHRDIKPENILVSQSGVVKL 141 (286)
T ss_pred CCccHHHHHHhcc-CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCCHHHEEECCCCcEEE
Confidence 9998 44432221 122 45556777889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....++..|++||+... ....+|+|+ ++|+++. +.++|.+.+
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~ 205 (286)
T cd07846 142 CDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT-GEPLFPGDS 205 (286)
T ss_pred EeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHc-CCCCCCCCc
Confidence 99999986544322 23456788999997432 234566676 5566655 466665443
No 271
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93 E-value=2.5e-25 Score=202.17 Aligned_cols=240 Identities=14% Similarity=0.068 Sum_probs=165.8
Q ss_pred CCCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 11 SRVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.+++...||+|.+.. ++..||+|.+...... .....+.+|+.+++.++|+|| +++++++.+.+..|
T Consensus 15 g~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~ 85 (277)
T cd05036 15 GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE-QDESDFLMEALIMSKFNHQNI--------VRLIGVSFERLPRF 85 (277)
T ss_pred CCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH-HHHHHHHHHHHHHHhCCCCCE--------eeEEEEEccCCCcE
Confidence 456777999999987 7889999988754432 233467789999999999999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhh-h--hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 86 IIGVRQSGP-KDQISRSKI-N--RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~-~--~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
+||||+.|+ +..+..... . ..........+.++.||+.||.|||+++ ++||||||+||++
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~----------------ivH~dlkp~nil~ 149 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH----------------FIHRDIAARNCLL 149 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------EeecccchheEEE
Confidence 999999887 443322221 1 1112355666778889999999999999 9999999999999
Q ss_pred CCCC---CEEEEecccccccCCCCCC----ccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCC
Q psy6542 162 DEHG---HVRISDLGLACDFSKKKPH----ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQS 229 (334)
Q Consensus 162 ~~~~---~vkl~DFGla~~~~~~~~~----~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~ 229 (334)
+.++ .+||+|||+++........ ....+..|++||+.. .....+|+|+ ++|+++..+..||.+.+...
T Consensus 150 ~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~ 229 (277)
T cd05036 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE 229 (277)
T ss_pred eccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 8765 5899999999876433221 112245689999742 3345667777 67777776887875543110
Q ss_pred cccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHH
Q psy6542 230 KPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMA 308 (334)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~ 308 (334)
+......... . ......+..+.+ +...|...+|..|+ +.++++++.
T Consensus 230 -------------------------~~~~~~~~~~--~----~~~~~~~~~~~~--~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 -------------------------VMEFVTGGGR--L----DPPKGCPGPVYR--IMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -------------------------HHHHHHcCCc--C----CCCCCCCHHHHH--HHHHHcCCCcccCcCHHHHHHHhh
Confidence 0001100000 0 011223344444 77788888888888 888888764
No 272
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=4.4e-25 Score=204.47 Aligned_cols=242 Identities=12% Similarity=0.036 Sum_probs=162.4
Q ss_pred CCCceEEEeceeC-------CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCe
Q psy6542 12 RVSKWRVKPPSLK-------PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~-------~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~ 83 (334)
.++.+.||+|.+. ..+..||+|.++...... ....+..|+++++.+ +|||| +++++++..++.
T Consensus 22 ~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~~h~~i--------v~~~~~~~~~~~ 92 (314)
T cd05099 22 EGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK-DLADLISEMELMKLIGKHKNI--------INLLGVCTQEGP 92 (314)
T ss_pred CCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH-HHHHHHHHHHHHHhccCCCCe--------eeEEEEEccCCc
Confidence 4667799998763 335579999988544322 344577899999999 69999 999999999999
Q ss_pred EEEEEEccCCC-hhHHhhhhhh------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEE
Q psy6542 84 HYIIGVRQSGP-KDQISRSKIN------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLH 150 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~~~~------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ii 150 (334)
+|++|||+.++ +..+...... ............++.|++.||.|||+++ ++
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g----------------i~ 156 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR----------------CI 156 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC----------------ee
Confidence 99999999988 4433322110 0112345556677889999999999999 99
Q ss_pred eeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCC
Q psy6542 151 FRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 151 HrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~ 221 (334)
||||||+||+++.++.+||+|||+++....... ....++..|++||+.. ..+ ..+|+|+ ++|+++..+..|
T Consensus 157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p 236 (314)
T cd05099 157 HRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236 (314)
T ss_pred eccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999986643221 1122345789999743 333 3556666 677777766767
Q ss_pred CCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-h
Q psy6542 222 LHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-S 300 (334)
Q Consensus 222 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~ 300 (334)
|.+.......+ .+.... +. . .....+.++.. +...|...+|..|+ +
T Consensus 237 ~~~~~~~~~~~-------------------------~~~~~~--~~--~--~~~~~~~~l~~--li~~cl~~~p~~Rps~ 283 (314)
T cd05099 237 YPGIPVEELFK-------------------------LLREGH--RM--D--KPSNCTHELYM--LMRECWHAVPTQRPTF 283 (314)
T ss_pred CCCCCHHHHHH-------------------------HHHcCC--CC--C--CCCCCCHHHHH--HHHHHcCCCcccCcCH
Confidence 64432111110 000000 00 0 01122233334 77888888888888 7
Q ss_pred HHHHHHHHHHh
Q psy6542 301 QELLGSMARKA 311 (334)
Q Consensus 301 ~~lL~~l~~~~ 311 (334)
.++++.+.+..
T Consensus 284 ~~ll~~l~~~~ 294 (314)
T cd05099 284 KQLVEALDKVL 294 (314)
T ss_pred HHHHHHHHHHH
Confidence 77877776654
No 273
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93 E-value=2.4e-25 Score=204.43 Aligned_cols=187 Identities=17% Similarity=0.199 Sum_probs=142.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC---------
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN--------- 82 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~--------- 82 (334)
.++.+.||+|.++.+|+.||||.++...........+.+|+++++.++|||+ +++++++.+..
T Consensus 17 ~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i--------~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 17 EGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI--------VNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred ccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCe--------eeeeheecCcchhhhccccC
Confidence 4678899999999999999999998665433344466789999999999999 99999887654
Q ss_pred -eEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 83 -SHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 83 -~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
.+|+||||+++++.......... .....++.++.|++.||.|||+.+ |+||||||+||++
T Consensus 89 ~~~~lv~e~~~~~l~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~----------------i~H~dl~p~nili 149 (302)
T cd07864 89 GAFYLVFEYMDHDLMGLLESGLVH---FSEDHIKSFMKQLLEGLNYCHKKN----------------FLHRDIKCSNILL 149 (302)
T ss_pred CcEEEEEcccCccHHHHHhcCCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEE
Confidence 79999999999843332322212 255666778889999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCCCC---CccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 162 DEHGHVRISDLGLACDFSKKKP---HASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
++++.+||+|||++........ ....++..|++||+.. . ....+|+|+ ++|+++ .+.+||...+
T Consensus 150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~-~g~~~~~~~~ 222 (302)
T cd07864 150 NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF-TKKPIFQANQ 222 (302)
T ss_pred CCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999999999999986654432 1223467789999743 2 244566666 555554 5677776544
No 274
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=6.8e-25 Score=195.86 Aligned_cols=184 Identities=14% Similarity=0.074 Sum_probs=138.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++... ++..||+|.++.... ......+.+|+++++.++|||| +++++++...+..++||||+
T Consensus 5 ~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~~ 74 (250)
T cd05085 5 KGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNI--------VKLIGVCTQRQPIYIVMELV 74 (250)
T ss_pred CCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCc--------CeEEEEEecCCccEEEEECC
Confidence 4667799999865 688999999876543 2334467889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +.......... ......+.++.|++.||.|+|+++ ++||||||+||++++++.+||+
T Consensus 75 ~~~~L~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~----------------~~H~dl~p~nili~~~~~~~l~ 135 (250)
T cd05085 75 PGGDFLSFLRKKKDE---LKTKQLVKFALDAAAGMAYLESKN----------------CIHRDLAARNCLVGENNVLKIS 135 (250)
T ss_pred CCCcHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eeecccChheEEEcCCCeEEEC
Confidence 988 43332222112 245556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC---ccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH---ASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~~---~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++......... ...++..|++||+...+ ...+|+|+ ++|+++..+..||.+
T Consensus 136 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 136 DFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred CCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999765443211 12234568899974322 34566666 667776657777644
No 275
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=5.1e-25 Score=197.33 Aligned_cols=184 Identities=14% Similarity=0.136 Sum_probs=142.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+|+.||||.+..........+.+.+|+++++.++|||| +++++++.+.+..|+||||+
T Consensus 10 ~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 10 EGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI--------VQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe--------eeeEeeecCCCeEEEEEecC
Confidence 4567799999999999999999998654434445577889999999999999 99999999999999999999
Q ss_pred CCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.|+ + +.+....... ......+.++.|++.||.|||+++ ++|+||+|+||+++.++.++|
T Consensus 82 ~~~~l~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~~l~~~nil~~~~~~~~l 142 (256)
T cd08218 82 EGGDLYKKINAQRGVL---FPEDQILDWFVQICLALKHVHDRK----------------ILHRDIKSQNIFLTKDGTIKL 142 (256)
T ss_pred CCCcHHHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------EecCCCCHHHEEEcCCCCEEE
Confidence 887 3 3332222111 244556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC--CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP--HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 170 ~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+|||++........ ....|+..|++||+.. .....+|.|+ ++|+++ .+..||.
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~-~g~~~~~ 202 (256)
T cd08218 143 GDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMC-TLKHAFE 202 (256)
T ss_pred eeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHH-cCCCCcc
Confidence 99999986654432 2234677899999843 2244677777 555555 4555653
No 276
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93 E-value=9.5e-25 Score=198.87 Aligned_cols=180 Identities=17% Similarity=0.052 Sum_probs=132.8
Q ss_pred CCCceEEEece----eCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEE
Q psy6542 12 RVSKWRVKPPS----LKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~----~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~ 85 (334)
+++...||++. ...++..||+|.++..... .....+.+|+++++.++|||| +++++++.. +..+|
T Consensus 14 ~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 14 EGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-QNTSGWKKEINILKTLYHENI--------VKYKGCCSEQGGKGLQ 84 (283)
T ss_pred cCCCcEEEEeeEccccCCCCceEEEEEeccccCh-HHHHHHHHHHHHHHhCCCCCE--------eeEEEEEecCCCceEE
Confidence 56677886653 5567889999999865332 234567789999999999999 999998764 34689
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
++|||++++ +....... . ......+.++.|++.||.|||+++ ++||||||+||+++++
T Consensus 85 lv~e~~~~~~l~~~~~~~--~---l~~~~~~~i~~~l~~~l~~lH~~~----------------i~H~dlkp~Nili~~~ 143 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH--K---LNLAQLLLFAQQICEGMAYLHSQH----------------YIHRDLAARNVLLDND 143 (283)
T ss_pred EEecCCCCCCHHHHHHHc--C---CCHHHHHHHHHHHHHHHHHHHHCC----------------eeccccChheEEEcCC
Confidence 999999988 43332221 2 255566778889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCC-----CccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
+.++|+|||+++....... ....++..|++||... . ....+|+|+ ++|+++++ ..|+
T Consensus 144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg-~~p~ 210 (283)
T cd05080 144 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH-CDSK 210 (283)
T ss_pred CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC-CCCC
Confidence 9999999999986654322 1223456688899743 2 244566666 66666654 4454
No 277
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.93 E-value=8e-25 Score=195.74 Aligned_cols=184 Identities=20% Similarity=0.173 Sum_probs=142.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|.+..+++.||||.+..........+.+.+|+++++.++|||+ +++++.+..++.+++||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 10 RGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI--------IEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCch--------hheeeeEecCCEEEEEEecC
Confidence 4567899999999999999999998765544456678899999999999999 99999999999999999999
Q ss_pred CCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CEE
Q psy6542 92 SGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HVR 168 (334)
Q Consensus 92 ~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~vk 168 (334)
+|+ +. .+.......+ ....++.++.|++.||.|||+++ ++|+||||+||++++++ .+|
T Consensus 82 ~~~~L~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~lh~~~----------------i~h~dl~~~nil~~~~~~~~~ 142 (256)
T cd08220 82 PGGTLAEYIQKRCNSLL---DEDTILHFFVQILLALHHVHTKL----------------ILHRDLKTQNILLDKHKMVVK 142 (256)
T ss_pred CCCCHHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCCCEEE
Confidence 987 43 3322221122 44556677789999999999999 99999999999998654 579
Q ss_pred EEecccccccCCCCC-CccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP-HASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 169 l~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|+|||++........ ....++..|++||+... .+..+|+|+ ++|+++.+ ..||.
T Consensus 143 l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~ 202 (256)
T cd08220 143 IGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASL-KRAFE 202 (256)
T ss_pred EccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhC-CCCcc
Confidence 999999987655432 33457888999998532 244566676 55666554 44553
No 278
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=3.9e-25 Score=202.89 Aligned_cols=247 Identities=12% Similarity=0.016 Sum_probs=161.7
Q ss_pred CCCCceEEEeceeCC----------------CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeE
Q psy6542 11 SRVSKWRVKPPSLKP----------------LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNL 74 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~----------------~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~ 74 (334)
.+++...||++.+.. ++..||+|+++.... ......+.+|+++++.++|+|| +++
T Consensus 14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i--------~~~ 84 (296)
T cd05095 14 GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNI--------IRL 84 (296)
T ss_pred cCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCc--------ceE
Confidence 356777899885433 455799999985533 3344578889999999999999 999
Q ss_pred EEEeecCCeEEEEEEccCCC-hhHHhhhhh-hh------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCC
Q psy6542 75 YKVTSEPNSHYIIGVRQSGP-KDQISRSKI-NR------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSV 146 (334)
Q Consensus 75 ~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~-~~------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~ 146 (334)
++++..++..|+||||+.++ +..+..... .. ........++.++.|++.||.|||+.+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-------------- 150 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-------------- 150 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--------------
Confidence 99999999999999999887 433322211 10 011234456778889999999999999
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCCCc----cccCcccccccccc-cc-CCcceeeh---hHHHHHcC
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFP 217 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~~~----~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~ 217 (334)
++||||||+||++++++.++|+|||+++.+....... ..++..|++||+.. .. +..+|+|+ ++|+++..
T Consensus 151 --i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~ 228 (296)
T cd05095 151 --FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTL 228 (296)
T ss_pred --eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999998664433211 22345678888632 22 44566676 67777652
Q ss_pred -CCCCCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccc
Q psy6542 218 -NRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSA 296 (334)
Q Consensus 218 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 296 (334)
+..||...+.. +.+. ......... . .....+.....++.+.+ +..+|...+|.
T Consensus 229 ~~~~p~~~~~~~---~~~~---------------~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~--li~~cl~~~p~ 282 (296)
T cd05095 229 CKEQPYSQLSDE---QVIE---------------NTGEFFRDQ-G-----RQVYLPKPALCPDSLYK--LMLSCWRRNAK 282 (296)
T ss_pred CCCCCccccChH---HHHH---------------HHHHHHhhc-c-----ccccCCCCCCCCHHHHH--HHHHHcCCCcc
Confidence 55565443211 1000 000000000 0 00001111223344445 88888899999
Q ss_pred cch-hHHHHHHHH
Q psy6542 297 HKC-SQELLGSMA 308 (334)
Q Consensus 297 ~r~-~~~lL~~l~ 308 (334)
.|+ +.++++.|.
T Consensus 283 ~Rp~~~~i~~~l~ 295 (296)
T cd05095 283 ERPSFQEIHATLL 295 (296)
T ss_pred cCCCHHHHHHHHh
Confidence 999 777777664
No 279
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=7.8e-25 Score=200.07 Aligned_cols=189 Identities=20% Similarity=0.204 Sum_probs=142.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~ivm 88 (334)
..++...||++.+..+++.||+|.+...... .....+.+|+++++.++|||| +++++++.+ ++.+|+||
T Consensus 10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYI--------VKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCe--------eeeeeEEEccCCCeEEEEE
Confidence 4577789999999999999999999865443 344567889999999999999 999998864 45789999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ +..+..................++.|++.||.|||+.+ ++|+||+|+||+++.++.+
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~----------------i~H~dl~~~nil~~~~~~~ 144 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK----------------IIHRDIKPSNILLTRKGQV 144 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEEecCCeE
Confidence 999987 43332221111122345556777889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|+|||++............++..|++||... .. +..+|+|+ ++|++ .++..||...
T Consensus 145 ~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l-~~g~~p~~~~ 206 (287)
T cd06621 145 KLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV-AQNRFPFPPE 206 (287)
T ss_pred EEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHH-HhCCCCCCcc
Confidence 99999999866554444455677889999743 22 44566666 45555 4566676554
No 280
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=6.5e-25 Score=202.85 Aligned_cols=183 Identities=15% Similarity=0.058 Sum_probs=141.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||++.++.+++.||||.+..... .....+.+.+|+++++.++|+|+ +++++++..++..|+||||
T Consensus 25 ~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 25 HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT--------IQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred eCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCc--------ccEEEEEEcCCeeEEEEEc
Confidence 46678999999999999999999976433 33344567789999999999999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.|++..+.......+ ....+..++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 97 ~~~~l~~~~~~~~~~l---~~~~~~~~~~~l~~~l~~LH~~~----------------i~H~dl~p~nil~~~~~~~kl~ 157 (308)
T cd06634 97 CLGSASDLLEVHKKPL---QEVEIAAVTHGALQGLAYLHSHN----------------MIHRDVKAGNILLSEPGLVKLG 157 (308)
T ss_pred cCCCHHHHHHHcCCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHhEEECCCCcEEEC
Confidence 9887543333222222 44555677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++...... ....++..|++||... .....+|+|+ ++|++ ..+..||..
T Consensus 158 dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el-~~g~~p~~~ 216 (308)
T cd06634 158 DFGSASIMAPA--NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-AERKPPLFN 216 (308)
T ss_pred CcccceeecCc--ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHH-HcCCCCCcc
Confidence 99999765443 2345778899999742 2244566666 55555 455656544
No 281
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.93 E-value=4.7e-25 Score=211.14 Aligned_cols=187 Identities=17% Similarity=0.101 Sum_probs=138.9
Q ss_pred CCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
+++...||+|.+ ..++..||||+++...... ..+.+.+|++++..+. |||| |++++++.+++.+|
T Consensus 47 ~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~~E~~~l~~l~~H~ni--------v~~~~~~~~~~~~~ 117 (401)
T cd05107 47 SGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS-EKQALMSELKIMSHLGPHLNI--------VNLLGACTKGGPIY 117 (401)
T ss_pred CCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh-HHHHHHHHHHHHHhcCCCCCe--------EEEEEEEccCCCcE
Confidence 467789999985 4466789999998654432 3346788999999997 9999 99999999999999
Q ss_pred EEEEccCCC--hhHHhhhhhh-----------------------------------------------------------
Q psy6542 86 IIGVRQSGP--KDQISRSKIN----------------------------------------------------------- 104 (334)
Q Consensus 86 ivmEy~~g~--l~~l~~~~~~----------------------------------------------------------- 104 (334)
+||||++|| .+++......
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 999999998 3444332100
Q ss_pred ----------------------------------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEE
Q psy6542 105 ----------------------------------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLH 150 (334)
Q Consensus 105 ----------------------------------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ii 150 (334)
.........++.++.|++.||.|||+.+ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~----------------iv 261 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN----------------CV 261 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------cC
Confidence 0001123345677889999999999999 99
Q ss_pred eeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCC
Q psy6542 151 FRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 151 HrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~ 221 (334)
||||||+|||+++++.+||+|||+++....... ....++..|++||... .. .+.+|+|+ ++|+++..+..|
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999986543321 2234567789999743 22 44566666 777887756666
Q ss_pred CC
Q psy6542 222 LH 223 (334)
Q Consensus 222 ~~ 223 (334)
|.
T Consensus 342 ~~ 343 (401)
T cd05107 342 YP 343 (401)
T ss_pred CC
Confidence 53
No 282
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=5.4e-25 Score=199.25 Aligned_cols=189 Identities=12% Similarity=0.043 Sum_probs=138.3
Q ss_pred CCCceEEEeceeCCCCCc--EEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFP--IQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~--vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
.++...||+|..+.++.. +|+|.++.... ....+.+.+|+++++++ +|||| +++++++...+.+|+||
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i--------v~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 5 EGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNI--------INLLGACEHRGYLYLAI 75 (270)
T ss_pred CCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCe--------eeEEEEEecCCCceEEE
Confidence 467789999999988864 58888874332 23345677899999999 79999 99999999999999999
Q ss_pred EccCCC-h-hHHhhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC
Q psy6542 89 VRQSGP-K-DQISRSKIN-----------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK 155 (334)
Q Consensus 89 Ey~~g~-l-~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK 155 (334)
||+.++ + +++...... ..........+.++.|++.||.|||+.+ ++|||||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~----------------i~H~dik 139 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ----------------FIHRDLA 139 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC----------------Eeecccc
Confidence 999887 4 333322110 0111245556778889999999999999 9999999
Q ss_pred CCceeeCCCCCEEEEecccccccCCCCCCc-cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 156 PANILLDEHGHVRISDLGLACDFSKKKPHA-SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 156 p~NiLl~~~~~vkl~DFGla~~~~~~~~~~-~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|+||++++++.+||+|||++.......... ...+..|++||+.. .. ...+|+|+ ++|+++..+..||.+.
T Consensus 140 p~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 215 (270)
T cd05047 140 ARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 215 (270)
T ss_pred cceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 999999999999999999986433221111 22345688999742 23 34566666 6777776677777543
No 283
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=1.6e-25 Score=205.52 Aligned_cols=181 Identities=17% Similarity=0.189 Sum_probs=141.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..++..||||.+..... ...+.+.+|+.+++.++|+|+ +++++.+..++..|+||||+
T Consensus 32 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------i~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 32 EGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENV--------VDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcH--------HHHHHheecCCeEEEEEeCC
Confidence 56778999999999999999999875432 234567889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.... .+ .....+.++.||+.||.|||+++ ++||||||+||++++++.++|+
T Consensus 102 ~~~~L~~~~~~~--~l---~~~~~~~~~~qi~~~l~~LH~~~----------------ivH~dlkp~Nill~~~~~~kL~ 160 (292)
T cd06658 102 EGGALTDIVTHT--RM---NEEQIATVCLSVLRALSYLHNQG----------------VIHRDIKSDSILLTSDGRIKLS 160 (292)
T ss_pred CCCcHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeecCCCHHHEEEcCCCCEEEc
Confidence 988 43333221 22 34556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++........ ....++..|++||+.. ..+..+|+|+ ++|+++. +..||..
T Consensus 161 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~ 220 (292)
T cd06658 161 DFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPYFN 220 (292)
T ss_pred cCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Confidence 9999976543322 3345788899999842 2345677777 6677665 5556654
No 284
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=8e-25 Score=195.28 Aligned_cols=187 Identities=17% Similarity=0.144 Sum_probs=146.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.+..++..||+|.+..........+.+.+|+++++.++|+|+ +++++.+..++..++||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~--------~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 10 KGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI--------IKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred cCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh--------hheEEEEecCCEEEEEEEec
Confidence 5788999999999999999999998766655566678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +.....................++.|++.||.|||+.+ ++|+||+|+||++++++.++|+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~----------------~~H~dl~~~nil~~~~~~~~l~ 145 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK----------------ILHRDIKPQNIFLTSNGLVKLG 145 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC----------------EecccCChHHeEEcCCCcEEEC
Confidence 987 43333332111122355666778889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|||++....... .....+++.|++||... . ....+|+|+ ++++++ .+..||.
T Consensus 146 d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~-~g~~p~~ 204 (258)
T cd08215 146 DFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC-TLKHPFE 204 (258)
T ss_pred CccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHH-cCCCCCC
Confidence 999998765553 23346788899999742 2 244566666 556665 4555653
No 285
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=3.6e-25 Score=206.82 Aligned_cols=243 Identities=11% Similarity=0.029 Sum_probs=162.8
Q ss_pred CCCCceEEEeceeCCC-------CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCC
Q psy6542 11 SRVSKWRVKPPSLKPL-------GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPN 82 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~-------~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~ 82 (334)
..++.+.||+|.+... +..||+|.++..... ...+.+.+|+++++++ +|||| +++++++..++
T Consensus 21 g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i--------v~~~~~~~~~~ 91 (334)
T cd05100 21 GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNI--------INLLGACTQDG 91 (334)
T ss_pred ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-HHHHHHHHHHHHHHhhcCCCCe--------eeeeEEEccCC
Confidence 4567788999976432 346899988754332 2345678899999999 79999 99999999999
Q ss_pred eEEEEEEccCCC-hh-HHhhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcE
Q psy6542 83 SHYIIGVRQSGP-KD-QISRSKIN-----------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCL 149 (334)
Q Consensus 83 ~~~ivmEy~~g~-l~-~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~i 149 (334)
.+|++|||+.++ +. ++...... ..........+.++.|++.||.|||+++ +
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g----------------i 155 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK----------------C 155 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC----------------e
Confidence 999999999887 43 33221100 0112244556677889999999999999 9
Q ss_pred EeeCCCCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCC
Q psy6542 150 HFRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRL 220 (334)
Q Consensus 150 iHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~ 220 (334)
+||||||+||+++.++.+||+|||+++....... ....++..|++||+.. . ....+|+|+ ++|+++..+..
T Consensus 156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~ 235 (334)
T cd05100 156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS 235 (334)
T ss_pred eccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999986654321 1122345789999743 2 344566666 66777765666
Q ss_pred CCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-
Q psy6542 221 ELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC- 299 (334)
Q Consensus 221 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~- 299 (334)
||.+.+.... ...+... ...+ .....+..+.. +...|...+|..|+
T Consensus 236 p~~~~~~~~~-------------------------~~~~~~~----~~~~--~~~~~~~~l~~--li~~cl~~~p~~Rps 282 (334)
T cd05100 236 PYPGIPVEEL-------------------------FKLLKEG----HRMD--KPANCTHELYM--IMRECWHAVPSQRPT 282 (334)
T ss_pred CCCCCCHHHH-------------------------HHHHHcC----CCCC--CCCCCCHHHHH--HHHHHcccChhhCcC
Confidence 6643321100 0000000 0000 11122233344 66777778888888
Q ss_pred hHHHHHHHHHHh
Q psy6542 300 SQELLGSMARKA 311 (334)
Q Consensus 300 ~~~lL~~l~~~~ 311 (334)
+.++++.+.+..
T Consensus 283 ~~ell~~l~~~~ 294 (334)
T cd05100 283 FKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHHHHh
Confidence 888888887654
No 286
>KOG4279|consensus
Probab=99.93 E-value=3.2e-26 Score=219.84 Aligned_cols=229 Identities=15% Similarity=0.110 Sum_probs=170.6
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+--+-||.|++..|....|||.+.... ++..+-+.+|+.+.++|+|.|| |++.+.+.+++.+-|.||-++
T Consensus 586 GTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNI--------VrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 586 GTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNI--------VRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred CceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhH--------HHHhhccCCCCeEEEEeecCC
Confidence 344689999999999999999998443 3456788899999999999999 999999999999999999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CCCEEEE
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HGHVRIS 170 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~~vkl~ 170 (334)
|| +..+.+++-+.+.. .+..+-.+..||+.||.|||++. |+|||||-+|+|++- .|.+||+
T Consensus 656 GGSLSsLLrskWGPlKD-NEstm~fYtkQILeGLkYLHen~----------------IVHRDIKGDNVLvNTySGvlKIS 718 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGPLKD-NESTMNFYTKQILEGLKYLHENK----------------IVHRDIKGDNVLVNTYSGVLKIS 718 (1226)
T ss_pred CCcHHHHHHhccCCCcc-chhHHHHHHHHHHHHhhhhhhcc----------------eeeccccCCcEEEeeccceEEec
Confidence 99 66666665444411 23333344569999999999999 999999999999975 5889999
Q ss_pred ecccccccCCCC--CCccccCccccccccccc---cC-Ccceeeh--hHHHHHcCCCCCCCCCCCCC--cccchhccccc
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKKL---GG-PFVSAWQ--TRYAKLFPNRLELHPESGQS--KPELIFMDQIE 240 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~---~~-~~~~~w~--~~~~~l~~~~~~~~~~~~~~--~~~~i~~~~~~ 240 (334)
|||.++.+..-. +.++.||..||+||+.+. || ..+|+|+ |....|+++++||.-..... -+.+=+.....
T Consensus 719 DFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP 798 (1226)
T KOG4279|consen 719 DFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHP 798 (1226)
T ss_pred ccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCC
Confidence 999998664433 567889999999999543 34 4566677 66666788999997665321 12222223333
Q ss_pred ccccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 241 EVSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 241 ~~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
++|..++- ..+.+|...+..+|..|...
T Consensus 799 ~iPeelsa-eak~FilrcFepd~~~R~sA 826 (1226)
T KOG4279|consen 799 PIPEELSA-EAKNFILRCFEPDPCDRPSA 826 (1226)
T ss_pred CCcHHHHH-HHHHHHHHHcCCCcccCccH
Confidence 44433331 45566777777777766654
No 287
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93 E-value=1.3e-25 Score=203.86 Aligned_cols=184 Identities=14% Similarity=0.109 Sum_probs=138.6
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecC--CeEEEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEP--NSHYIIGV 89 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~--~~~~ivmE 89 (334)
++...||++.++.+++.||||.++....+... .....|+.++..+. |+|+ +++++++.++ +.+++|||
T Consensus 10 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~-~~~~~e~~~l~~l~~h~~i--------~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ-VNNLREIQALRRLSPHPNI--------LRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred cccceEEEEEEcCCCcEEEEEEehhccCCchh-hhHHHHHHHHhhcCCCCCc--------cceEEEEecCCCCcEEEEEe
Confidence 56679999999999999999998865432222 23346888888885 9999 9999999977 88999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|++|++..........+ ....++.++.|++.||.|||+.+ ++||||||+||++++ +.+||
T Consensus 81 ~~~~~l~~~l~~~~~~~---~~~~~~~~~~qi~~~L~~LH~~~----------------i~H~dl~p~ni~l~~-~~~kl 140 (282)
T cd07831 81 LMDMNLYELIKGRKRPL---PEKRVKSYMYQLLKSLDHMHRNG----------------IFHRDIKPENILIKD-DILKL 140 (282)
T ss_pred cCCccHHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ceecccCHHHEEEcC-CCeEE
Confidence 99988433223221222 45556677789999999999999 999999999999999 99999
Q ss_pred EecccccccCCCCC-CccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||+++....... ....++..|++||+.. . ....+|+|+ ++|++ +++.+||.+.+
T Consensus 141 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el-~~~~~p~~~~~ 203 (282)
T cd07831 141 ADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEI-LSLFPLFPGTN 203 (282)
T ss_pred EecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHH-HcCCcCCCCCC
Confidence 99999987654433 2345688899999632 2 244566666 45555 45677876654
No 288
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93 E-value=2.3e-25 Score=204.91 Aligned_cols=183 Identities=17% Similarity=0.175 Sum_probs=142.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||+|.+..+++.||||.+...... ..+.+.+|+.+++.++|||+ +++++++..++..|+||||
T Consensus 30 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i--------~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 30 GEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNV--------VEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred CCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCch--------hhhhhheeeCCeEEEEEec
Confidence 3567789999999999999999999754432 23457789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
++|+ +..+... ..+ ....++.++.|++.||.|||+.+ ++||||||+||+++.++.+||
T Consensus 100 ~~~~~L~~~~~~--~~~---~~~~~~~~~~qi~~~L~~LH~~~----------------ivH~dl~p~Nill~~~~~~kL 158 (297)
T cd06659 100 LQGGALTDIVSQ--TRL---NEEQIATVCESVLQALCYLHSQG----------------VIHRDIKSDSILLTLDGRVKL 158 (297)
T ss_pred CCCCCHHHHHhh--cCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHeEEccCCcEEE
Confidence 9988 4443322 122 44556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC--CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++....... .....++..|++||+.. .....+|+|+ ++|+++. +..||...
T Consensus 159 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~ 220 (297)
T cd06659 159 SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD-GEPPYFSD 220 (297)
T ss_pred eechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Confidence 9999998654432 23356788999999853 2344567777 5666654 56676543
No 289
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93 E-value=8.7e-25 Score=197.10 Aligned_cols=184 Identities=20% Similarity=0.217 Sum_probs=138.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~i 86 (334)
.++...||++.+..+|..||||.+..... .....+.+.+|+++++.++|||| +++++++.+. ..+|+
T Consensus 12 ~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 12 QGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERI--------VQYYGCLRDPMERTLSI 83 (265)
T ss_pred cCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCe--------eeEEeEeccCCCceEEE
Confidence 35667999999999999999999875432 22334577889999999999999 9999988753 56899
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||++|+ +....... ... .......++.|++.||.|||+.+ ++|+||||+||++++++
T Consensus 84 v~e~~~~~~L~~~l~~~-~~~---~~~~~~~~~~~l~~~l~~lH~~~----------------i~H~dl~p~nil~~~~~ 143 (265)
T cd06652 84 FMEHMPGGSIKDQLKSY-GAL---TENVTRKYTRQILEGVSYLHSNM----------------IVHRDIKGANILRDSVG 143 (265)
T ss_pred EEEecCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EecCCCCHHHEEecCCC
Confidence 99999987 43332221 122 33445667789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCC-----CCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKK-----KPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~-----~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.++|+|||+++..... ......++..|++||+.. .. ...+|+|+ ++|+++ .+..||..
T Consensus 144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~ 211 (265)
T cd06652 144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML-TEKPPWAE 211 (265)
T ss_pred CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh-hCCCCCCc
Confidence 9999999999865332 122345788899999843 22 34566666 566665 45667643
No 290
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93 E-value=1.4e-25 Score=203.71 Aligned_cols=186 Identities=19% Similarity=0.171 Sum_probs=144.9
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
++.+.||+|.+..+|+.+|+|.++...........+.+|+++++.++|+|+ +++++++..++.+|+||||++
T Consensus 10 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI--------IKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred CCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCc--------chHHHhhccCCCEEEEEeccC
Confidence 556789999999999999999998665543445677789999999999999 999999999999999999999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
+++........... .......++.|++.||.|||+.+ ++|+||||+||++++++.++|+||
T Consensus 82 ~~l~~~l~~~~~~~---~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~dl~p~nili~~~~~~~l~df 142 (283)
T cd05118 82 TDLYKLIKDRQRGL---PESLIKSYLYQLLQGLAFCHSHG----------------ILHRDLKPENLLINTEGVLKLADF 142 (283)
T ss_pred CCHHHHHHhhcccC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCcCHHHEEECCCCcEEEeee
Confidence 88544433322222 44556677789999999999999 999999999999999999999999
Q ss_pred ccccccCCCC--CCccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 173 GLACDFSKKK--PHASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 173 Gla~~~~~~~--~~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|++....... .....++..|++||+.. .....+|.|+ ++|+++ ++..+|.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~-tg~~~~~~~~ 203 (283)
T cd05118 143 GLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELL-SRRPLFPGKS 203 (283)
T ss_pred eeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9998775543 12234677889999742 2344667777 455554 5567776554
No 291
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=8.2e-25 Score=196.27 Aligned_cols=178 Identities=15% Similarity=0.161 Sum_probs=132.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee-cCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS-EPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~-~~~~~~ivmEy 90 (334)
+++...||++... |..||+|.++... ..+.+.+|+.+++.++|+|+ +++++++. .++..|++|||
T Consensus 16 ~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 16 KGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNL--------VQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred ccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCe--------eeEEEEEEcCCCceEEEEEC
Confidence 4555689988654 7889999987433 23467789999999999999 99998754 55679999999
Q ss_pred cCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
++++ + +++..... ........+.++.|++.||.|||+++ ++||||||+||++++++.+|
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlkp~nil~~~~~~~k 142 (256)
T cd05082 82 MAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEANN----------------FVHRDLAARNVLVSEDNVAK 142 (256)
T ss_pred CCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC----------------EeccccchheEEEcCCCcEE
Confidence 9987 4 33322221 11245556677889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCCCCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
|+|||++........ ...++..|++||+... . ...+|+|+ ++|+++..+.+||.
T Consensus 143 l~dfg~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 143 VSDFGLTKEASSTQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred ecCCccceeccccCC-CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999986544332 2334567899997432 2 34566666 66777665777754
No 292
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=1.5e-25 Score=203.68 Aligned_cols=188 Identities=18% Similarity=0.173 Sum_probs=145.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivm 88 (334)
..++.+.||+|.+..+|+.||+|.+..........+.+.+|+++++.++|+|+ +++++++... +..|+||
T Consensus 8 ~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 8 GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI--------VRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred ccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCe--------eeheeeEecCCCCcEEEEe
Confidence 34678899999999999999999999765433344567789999999999999 9999999987 8899999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||+++++..+...... .......+.++.|++.||.|||+.+ ++|+||||+||++++++.++
T Consensus 80 e~~~~~l~~~~~~~~~---~~~~~~~~~i~~~i~~al~~LH~~~----------------~~h~dl~p~nil~~~~~~~~ 140 (287)
T cd07840 80 EYMDHDLTGLLDSPEV---KFTESQIKCYMKQLLEGLQYLHSNG----------------ILHRDIKGSNILINNDGVLK 140 (287)
T ss_pred ccccccHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCC----------------ceeccCcHHHeEEcCCCCEE
Confidence 9999885444333211 2255566778889999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC---CCccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK---PHASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++....... .....++..|++||... .....+|+|+ ++|+++. +..||....
T Consensus 141 l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t-~~~p~~~~~ 206 (287)
T cd07840 141 LADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL-GKPIFQGST 206 (287)
T ss_pred EccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHh-CCCCCCCCC
Confidence 99999998775553 22234577899999632 2244566676 5566654 566765544
No 293
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93 E-value=9.9e-25 Score=198.53 Aligned_cols=184 Identities=10% Similarity=0.098 Sum_probs=137.8
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEee------cCCe
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTS------EPNS 83 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~------~~~~ 83 (334)
..++.+.||+|.+..+++.||+|++..... ....+..|+.+++.+ +|+|+ +++++++. .++.
T Consensus 25 g~g~~~~v~~~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~~~~h~~i--------~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 25 GNGTYGQVYKGRHVKTGQLAAIKVMDVTED---EEEEIKLEINMLKKYSHHRNI--------ATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred ccCCCeEEEEEEEcCCCcEEEEEEEecChH---HHHHHHHHHHHHHHhcCCCcE--------EEEeeehhcccccCCCCE
Confidence 457888999999999999999999875432 223567799999988 69999 99999985 3467
Q ss_pred EEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 84 HYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
+|++|||+.++ +..+...... .......++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~----------------ivH~dl~~~nili~ 155 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAHK----------------VIHRDIKGQNVLLT 155 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEEC
Confidence 89999999987 4443332211 11234555667789999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCC--CCCccccCcccccccccc------ccC-Ccceeeh---hHHHHHcCCCCCCCC
Q psy6542 163 EHGHVRISDLGLACDFSKK--KPHASVESDCILHGYIKK------LGG-PFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~------~~~-~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+++.++|+|||++...... ......|+..|++||+.. ..+ ..+|.|+ ++|+++. +.+||..
T Consensus 156 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~-g~~p~~~ 228 (282)
T cd06636 156 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE-GAPPLCD 228 (282)
T ss_pred CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh-CCCCccc
Confidence 9999999999999865432 233456788999999742 123 3456666 5666655 5667644
No 294
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=3.8e-25 Score=197.72 Aligned_cols=189 Identities=15% Similarity=0.079 Sum_probs=146.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.++.+++.+|||.+............+.+|+++++.++|+|| +++++++.+++..|+||||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 10 KGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI--------ISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred CCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCc--------hhhhhhhccCCEEEEEehhc
Confidence 4677889999999999999999998765544445567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..................++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~----------------i~h~~l~~~ni~~~~~~~~kl~ 145 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK----------------ILHRDLKSANILLVANDLVKIG 145 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC----------------cccCCCCcceEEEecCCcEEEe
Confidence 887 44332321111122345556778889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++............++..|++||... .. ...+|+|+ ++|++ ..+..||...
T Consensus 146 d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l-~~g~~p~~~~ 204 (256)
T cd08530 146 DLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM-ATFAPPFEAR 204 (256)
T ss_pred eccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHH-HhCCCCCCCC
Confidence 99999877666555566788899999742 22 33566676 55555 5566676443
No 295
>KOG0983|consensus
Probab=99.93 E-value=8.6e-26 Score=196.58 Aligned_cols=187 Identities=14% Similarity=0.152 Sum_probs=149.8
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++.+.|++++.+.+|...|||.++...... ..+++...+.++.+.. .|.| |+-|++|..+..++|.||.|
T Consensus 103 GtcG~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyI--------V~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 103 GTCGQVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYI--------VQCFGYFITNTDVFICMELM 173 (391)
T ss_pred CCccceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCee--------eeeeeEEeeCchHHHHHHHH
Confidence 677899999999999999999999776543 4456777888776665 7888 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
....+.++..-...+ ++..+-.+.+.+++||.||-++. .|||||+||+|||+|..|.+|+||
T Consensus 174 s~C~ekLlkrik~pi---PE~ilGk~tva~v~AL~YLKeKH---------------~viHRDvKPSNILlDe~GniKlCD 235 (391)
T KOG0983|consen 174 STCAEKLLKRIKGPI---PERILGKMTVAIVKALYYLKEKH---------------GVIHRDVKPSNILLDERGNIKLCD 235 (391)
T ss_pred HHHHHHHHHHhcCCc---hHHhhhhhHHHHHHHHHHHHHhc---------------ceeecccCccceEEccCCCEEeec
Confidence 999777655543343 45555677789999999998754 199999999999999999999999
Q ss_pred cccccccCCCCCCc-cccCccccccccc-----cccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKKPHA-SVESDCILHGYIK-----KLGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~~~~-~~~t~~~~~~~v~-----~~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||++-.+.++..++ +.|-+.||+||-. ..+.-.+|+|+ +....++++..||.+..
T Consensus 236 FGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~ 298 (391)
T KOG0983|consen 236 FGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK 298 (391)
T ss_pred ccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC
Confidence 99998777666554 5678899999963 23345788899 44555577888887754
No 296
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=5.5e-25 Score=203.06 Aligned_cols=188 Identities=14% Similarity=0.051 Sum_probs=137.8
Q ss_pred CCCceEEEeceeCC-------CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCe
Q psy6542 12 RVSKWRVKPPSLKP-------LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-------~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~ 83 (334)
+++.+.||+|.+.. ++..||+|.++...... ....+.+|+++++.+ +|+|| +++++++..++.
T Consensus 28 ~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i--------~~~~~~~~~~~~ 98 (307)
T cd05098 28 EGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHKNI--------INLLGACTQDGP 98 (307)
T ss_pred cCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH-HHHHHHHHHHHHHHhcCCCCE--------eeEEEEEecCCc
Confidence 56677999987643 34579999998653322 334577799999999 79999 999999999999
Q ss_pred EEEEEEccCCC-hh-HHhhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEE
Q psy6542 84 HYIIGVRQSGP-KD-QISRSKINR-----------YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLH 150 (334)
Q Consensus 84 ~~ivmEy~~g~-l~-~l~~~~~~~-----------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ii 150 (334)
+|+||||+.++ +. ++....... -........+.++.|++.||.|||+.+ ++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g----------------i~ 162 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK----------------CI 162 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC----------------cc
Confidence 99999999987 43 443221100 011344556778889999999999999 99
Q ss_pred eeCCCCCceeeCCCCCEEEEecccccccCCCC----CCccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCC
Q psy6542 151 FRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 151 HrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~ 221 (334)
||||||+||+++.++.+||+|||+++...... .....++..|++||+.. . ....+|+|+ ++|+++.++..|
T Consensus 163 H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p 242 (307)
T cd05098 163 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242 (307)
T ss_pred cccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999998664322 11122346789999743 2 244566666 677777767777
Q ss_pred CCC
Q psy6542 222 LHP 224 (334)
Q Consensus 222 ~~~ 224 (334)
|.+
T Consensus 243 ~~~ 245 (307)
T cd05098 243 YPG 245 (307)
T ss_pred CCc
Confidence 643
No 297
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.93 E-value=8.3e-25 Score=197.12 Aligned_cols=184 Identities=15% Similarity=0.168 Sum_probs=141.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc----chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH----ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~----~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
..++...||++.+..+++.||+|+++.... .....+.+.+|++++++++|+|+ +++++++.+++.+++
T Consensus 9 g~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~ 80 (268)
T cd06630 9 GTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI--------IRMLGATCEDSHFNL 80 (268)
T ss_pred cCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCce--------ehhhceeccCCeEEE
Confidence 456778999999999999999999986543 12245678889999999999999 999999999999999
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
||||+.|+ +..+.... ..+ .......++.|++.||.|||+++ ++||||||+||+++.++
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~---~~~~~~~~~~ql~~al~~LH~~~----------------i~H~~i~~~nil~~~~~ 140 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAF---KEAVIINYTEQLLRGLSYLHENQ----------------IIHRDVKGANLLIDSTG 140 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCC
Confidence 99999988 54443322 122 44556677889999999999999 99999999999998776
Q ss_pred -CEEEEecccccccCCCCC------CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 166 -HVRISDLGLACDFSKKKP------HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 166 -~vkl~DFGla~~~~~~~~------~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
.++|+|||++........ ....++..|++||+.. .....+|+|+ ++|+++. +..||.
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~ 209 (268)
T cd06630 141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT-AKPPWN 209 (268)
T ss_pred CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh-CCCCCC
Confidence 589999999986654321 2235677899999742 2244566677 5555554 556664
No 298
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93 E-value=4.5e-25 Score=206.38 Aligned_cols=185 Identities=17% Similarity=0.096 Sum_probs=138.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecC--CeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEP--NSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivm 88 (334)
+++...||+|.+..+|+.||||.+............+.+|+.+++++ +|+|| +++++++... ..+|+||
T Consensus 17 ~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni--------~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 17 KGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNI--------VKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred CCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCc--------cceeeeeccCCCceEEEEe
Confidence 46677999999999999999999875433333344566799999999 99999 9999988643 4689999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
||+++++....... .+ .......++.|++.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 89 e~~~~~L~~~~~~~--~~---~~~~~~~i~~qi~~~L~~LH~~~----------------i~H~dl~p~nill~~~~~~k 147 (337)
T cd07852 89 EYMETDLHAVIRAN--IL---EDVHKRYIMYQLLKALKYIHSGN----------------VIHRDLKPSNILLNSDCRVK 147 (337)
T ss_pred cccccCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEEcCCCcEE
Confidence 99998753332221 22 23344556779999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC-------CCccccCcccccccccc--c-cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKK-------PHASVESDCILHGYIKK--L-GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 169 l~DFGla~~~~~~~-------~~~~~~t~~~~~~~v~~--~-~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|+|||++....... .....|+..|++||+.. . ....+|+|+ ++|++ .++..||.+.+
T Consensus 148 l~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el-~tg~~pf~~~~ 217 (337)
T cd07852 148 LADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEM-LLGKPLFPGTS 217 (337)
T ss_pred EeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHH-HhCCCCCCCCC
Confidence 99999998654332 12245688899999642 2 234566676 45555 45677775544
No 299
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.93 E-value=5.3e-25 Score=197.91 Aligned_cols=185 Identities=15% Similarity=0.060 Sum_probs=134.3
Q ss_pred CCCCceEEEeceeCC---CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee-cCCeEEE
Q psy6542 11 SRVSKWRVKPPSLKP---LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS-EPNSHYI 86 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~---~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~-~~~~~~i 86 (334)
.+++...||+|.... .+..||||.+..... ....+.+.+|+.+++.++|||+ +++++++. .++..++
T Consensus 4 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~l 74 (262)
T cd05058 4 GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNV--------LSLLGICLPSEGSPLV 74 (262)
T ss_pred cccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCc--------ceEEEEeecCCCCcEE
Confidence 356777899988653 456799999864332 2234567789999999999999 99999765 4566899
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||+.++ +..+....... ......+.++.|++.||.|||+.+ ++||||||+|||+++++
T Consensus 75 v~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dlk~~nili~~~~ 135 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETHN---PTVKDLIGFGLQVAKGMEYLASKK----------------FVHRDLAARNCMLDESF 135 (262)
T ss_pred EEecCCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------ccccccCcceEEEcCCC
Confidence 99999887 44333322111 133445677789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCC------CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKK------PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~------~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
.+||+|||+++...... .....++..|++||... .. ...+|+|+ ++|+++.++.+||.
T Consensus 136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999998654321 11223466788999742 23 34566666 67777776776653
No 300
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.93 E-value=1.1e-24 Score=196.66 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=135.9
Q ss_pred CCCceEEEeceeCC------------CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee
Q psy6542 12 RVSKWRVKPPSLKP------------LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS 79 (334)
Q Consensus 12 ~~~~~~V~~a~~~~------------~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~ 79 (334)
++....||++.... ....||+|.+..... ...+.+.+|+.+++.++|||| +++++++.
T Consensus 5 ~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~l~~l~hp~i--------v~~~~~~~ 74 (262)
T cd05077 5 RGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR--DISLAFFETASMMRQVSHKHI--------VLLYGVCV 74 (262)
T ss_pred cCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh--hHHHHHHHHHHHHHhCCCCCE--------eeEEEEEe
Confidence 46677899887432 234589998765432 244567789999999999999 99999999
Q ss_pred cCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCc
Q psy6542 80 EPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPAN 158 (334)
Q Consensus 80 ~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~N 158 (334)
++...++||||++++ ++.+.......+ .....+.++.||+.||.|||+++ |+||||||+|
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~~~----------------ivH~dlkp~N 135 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKSDVL---TTPWKFKVAKQLASALSYLEDKD----------------LVHGNVCTKN 135 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHhhhCC----------------eECCCCCccc
Confidence 988999999999988 554433322222 44456778889999999999999 9999999999
Q ss_pred eeeCCCCC-------EEEEecccccccCCCCCCccccCcccccccccc--ccC-Ccceeeh---hHHHHHcCCCCCCCC
Q psy6542 159 ILLDEHGH-------VRISDLGLACDFSKKKPHASVESDCILHGYIKK--LGG-PFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 159 iLl~~~~~-------vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~--~~~-~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
||++.++. ++++|||++....... ...++..|++||... ..+ ..+|+|+ ++|++++++..|+..
T Consensus 136 ill~~~~~~~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (262)
T cd05077 136 ILLAREGIDGECGPFIKLSDPGIPITVLSRQ--ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKD 212 (262)
T ss_pred EEEecCCccCCCCceeEeCCCCCCccccCcc--cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99987664 8999999987554332 234677799999753 223 3566666 778887777777644
No 301
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.93 E-value=7.8e-25 Score=205.51 Aligned_cols=188 Identities=18% Similarity=0.067 Sum_probs=135.4
Q ss_pred CCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeec-CCeE
Q psy6542 12 RVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSE-PNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~-~~~~ 84 (334)
+++...||+|.+ ..+++.||||.++...... ....+.+|+.++..+ +|||| +++++++.. ++.+
T Consensus 17 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~~h~ni--------v~~~~~~~~~~~~~ 87 (343)
T cd05103 17 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV--------VNLLGACTKPGGPL 87 (343)
T ss_pred CCccceEEEEeeccCCccccceeEEEEEeccCCChH-HHHHHHHHHHHHHhccCCccH--------hhhcceeecCCCce
Confidence 567789999974 4678899999998654322 234677899999999 68999 999988764 4578
Q ss_pred EEEEEccCCC-hhHHhhhhhhh----------------------------------------------------------
Q psy6542 85 YIIGVRQSGP-KDQISRSKINR---------------------------------------------------------- 105 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~---------------------------------------------------------- 105 (334)
+++||||+|| +..+.......
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 9999999998 43332221100
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCC
Q psy6542 106 -----YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSK 180 (334)
Q Consensus 106 -----~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~ 180 (334)
...........++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~----------------i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~ 231 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK----------------CIHRDLAARNILLSENNVVKICDFGLARDIYK 231 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCccCeEEEcCCCcEEEEeccccccccc
Confidence 001234455677889999999999999 99999999999999999999999999986543
Q ss_pred CCCC----ccccCccccccccc-ccc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 181 KKPH----ASVESDCILHGYIK-KLG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 181 ~~~~----~~~~t~~~~~~~v~-~~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.... ...++..|++||+. ... ...+|+|+ ++|+++..+..||..
T Consensus 232 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 284 (343)
T cd05103 232 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 284 (343)
T ss_pred CcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 3221 12235668999974 233 44566666 667777666666543
No 302
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=6.2e-25 Score=199.68 Aligned_cols=167 Identities=14% Similarity=0.094 Sum_probs=125.1
Q ss_pred CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhh
Q psy6542 28 FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRY 106 (334)
Q Consensus 28 ~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~ 106 (334)
..||+|++..... .....+.+|+++++.++|||| +++++++.+++..|+||||++|+ ++.+.......+
T Consensus 45 ~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~ni--------v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~ 114 (274)
T cd05076 45 LRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHL--------AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRV 114 (274)
T ss_pred eeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCe--------eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCC
Confidence 4689998864332 234567789999999999999 99999999999999999999999 555544322223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-------CEEEEecccccccC
Q psy6542 107 HKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-------HVRISDLGLACDFS 179 (334)
Q Consensus 107 ~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-------~vkl~DFGla~~~~ 179 (334)
.....+.++.|++.||.|||+++ |+||||||+|||+++.+ .+|++|||++....
T Consensus 115 ---~~~~~~~i~~qi~~~l~~lH~~~----------------iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~ 175 (274)
T cd05076 115 ---PVAWKITVAQQLASALSYLEDKN----------------LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTAL 175 (274)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHcCC----------------ccCCCCCcccEEEeccCcccCccceeeecCCccccccc
Confidence 34455677889999999999999 99999999999997653 38999999986543
Q ss_pred CCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 180 KKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 180 ~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
... ...++..|++||.... ..+.+|+|+ ++|++++++..||...
T Consensus 176 ~~~--~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 225 (274)
T cd05076 176 SRE--ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER 225 (274)
T ss_pred ccc--ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 322 2245667889996432 245667777 6778777777776543
No 303
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93 E-value=1.3e-24 Score=195.22 Aligned_cols=185 Identities=18% Similarity=0.204 Sum_probs=145.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.+..+++.||+|.++.........+.+.+|+++++.++|+|| +++++++...+.+++|+||+
T Consensus 10 ~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 10 GGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL--------VKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred cCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh--------hheeeeEecCCEEEEEEecC
Confidence 4677899999999999999999998776654456678899999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+.... ... .......++.|++.||.|||+.+ ++|+||+|+||++++++.+||+
T Consensus 82 ~~~~L~~~~~~~-~~~---~~~~~~~i~~~i~~~l~~lh~~~----------------i~H~dl~~~nil~~~~~~~kl~ 141 (264)
T cd06626 82 SGGTLEELLEHG-RIL---DEHVIRVYTLQLLEGLAYLHSHG----------------IVHRDIKPANIFLDHNGVIKLG 141 (264)
T ss_pred CCCcHHHHHhhc-CCC---ChHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCCCEEEc
Confidence 988 44333322 112 34455667789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC------ccccCccccccccccc-----cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH------ASVESDCILHGYIKKL-----GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~------~~~~t~~~~~~~v~~~-----~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++......... ...++..|++||+... ....+|+|+ ++|+++. +..||...
T Consensus 142 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~-g~~pf~~~ 209 (264)
T cd06626 142 DFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT-GKRPWSEL 209 (264)
T ss_pred ccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh-CCCCccCC
Confidence 99999876544321 2346788999997432 234566666 5566654 56676543
No 304
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.93 E-value=1.1e-24 Score=198.49 Aligned_cols=185 Identities=13% Similarity=0.021 Sum_probs=135.3
Q ss_pred CCCceEEEeceeCCCCCc----EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFP----IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~----vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+++...||+|....+|.. ||+|.+..... ......+..|+.+++.++|||| +++++++. +...+++
T Consensus 17 ~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~i--------v~~~~~~~-~~~~~~i 86 (279)
T cd05111 17 SGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYI--------VRLLGICP-GASLQLV 86 (279)
T ss_pred ccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCc--------ceEEEEEC-CCccEEE
Confidence 577779999999888875 66666643222 2233466778889999999999 99999875 4557889
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.++ +..........+ .......++.|++.||.|||+++ ++||||||+|||++.++.
T Consensus 87 ~e~~~~gsL~~~l~~~~~~~---~~~~~~~i~~qi~~~l~~lH~~~----------------iiH~dlkp~nili~~~~~ 147 (279)
T cd05111 87 TQLSPLGSLLDHVRQHRDSL---DPQRLLNWCVQIAKGMYYLEEHR----------------MVHRNLAARNILLKSDSI 147 (279)
T ss_pred EEeCCCCcHHHHHHhcccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------EeccccCcceEEEcCCCc
Confidence 9999887 433322222222 44566778889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+||+|||+++....... ....++..|++||... ..+..+|+|+ ++|+++..+..||.+.
T Consensus 148 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~ 215 (279)
T cd05111 148 VQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM 215 (279)
T ss_pred EEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999986643321 1233466788999753 2344667777 6777776677776544
No 305
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=8.4e-25 Score=196.79 Aligned_cols=183 Identities=15% Similarity=0.060 Sum_probs=134.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|.+..++ .||+|.+..... ..+.+.+|+++++.++|+|+ +++++++. .+..|++|||+
T Consensus 16 ~g~~~~v~~~~~~~~~-~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 16 QGCFGEVWMGTWNGTT-KVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKL--------VPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred CcCCCeEEEEEEcCCc-eEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCe--------eeEEEEEc-CCCcEEEEEcC
Confidence 3566689999887654 599999875443 23457789999999999999 99998875 45689999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+...... ........+.++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~----------------i~H~dl~~~Nill~~~~~~~l~ 144 (260)
T cd05069 83 GKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERMN----------------YIHRDLRAANILVGDNLVCKIA 144 (260)
T ss_pred CCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCC----------------EeecccCcceEEEcCCCeEEEC
Confidence 987 4333222111 11244555677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC---ccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH---ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~---~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||+++........ ...++..|++||... .....+|+|+ ++|++++.+.+||.+.
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 207 (260)
T cd05069 145 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207 (260)
T ss_pred CCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999866443221 223456688899743 2244566677 6777777677787543
No 306
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93 E-value=1e-24 Score=199.08 Aligned_cols=187 Identities=14% Similarity=0.131 Sum_probs=141.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||++.+..+|+.||||.+...... .....+.+|+.++.++. |+|| +++++++..++..+++|||
T Consensus 14 ~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~i--------v~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 14 RGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYI--------VKFYGALFREGDCWICMEL 84 (288)
T ss_pred CCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCE--------eeeeeEEecCCcEEEEEec
Confidence 577789999999999999999999865543 23456788999999996 9999 9999999999999999999
Q ss_pred cCCChhHHhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 91 QSGPKDQISRSK-INRYHKKLRKCFIRRTVQLLEPVHTCHSA-LNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 91 ~~g~l~~l~~~~-~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
+.+++..+.... ...........+..++.|++.||.|||+. + ++||||||+||++++++.++
T Consensus 85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~----------------i~H~dlkp~Nil~~~~~~~k 148 (288)
T cd06616 85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK----------------IIHRDVKPSNILLDRNGNIK 148 (288)
T ss_pred ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC----------------eeccCCCHHHEEEccCCcEE
Confidence 988743322211 00111224555667788999999999975 7 99999999999999999999
Q ss_pred EEecccccccCCCCC-CccccCccccccccccc-----cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP-HASVESDCILHGYIKKL-----GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 169 l~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~~-----~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|+|||+++....... ....++..|++||+... ..+.+|+|+ ++|+++ .+.+||..
T Consensus 149 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~ 212 (288)
T cd06616 149 LCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVA-TGKFPYPK 212 (288)
T ss_pred EeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHH-hCCCCchh
Confidence 999999986544332 33457788999998432 244566676 556655 46667643
No 307
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=1.2e-24 Score=199.70 Aligned_cols=189 Identities=15% Similarity=0.081 Sum_probs=137.8
Q ss_pred CCCCceEEEeceeCCCC--------------CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEE
Q psy6542 11 SRVSKWRVKPPSLKPLG--------------FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYK 76 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~--------------~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~ 76 (334)
.+++...||+|.+..++ ..||||.++.... ......+.+|++++++++|+|+ +++++
T Consensus 14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i--------~~~~~ 84 (295)
T cd05097 14 GEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNI--------IRLLG 84 (295)
T ss_pred CCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCc--------CeEEE
Confidence 46777899999876543 3489999986543 2344568889999999999999 99999
Q ss_pred EeecCCeEEEEEEccCCC-hhHHhhh-hhh-------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCC
Q psy6542 77 VTSEPNSHYIIGVRQSGP-KDQISRS-KIN-------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVP 147 (334)
Q Consensus 77 ~~~~~~~~~ivmEy~~g~-l~~l~~~-~~~-------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~ 147 (334)
++..++..|+||||+.|+ +..+... ... ..........+.++.|++.||.|||+.+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--------------- 149 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--------------- 149 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---------------
Confidence 999999999999999988 4333221 110 0012245566778889999999999999
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEecccccccCCCCCC----ccccCcccccccccc--ccCCcceeeh---hHHHHHcC-
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFP- 217 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~~----~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~- 217 (334)
++||||||+||++++++.+||+|||++......... ...++..|++||+.. ..+..+|+|+ ++|+++..
T Consensus 150 -i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~ 228 (295)
T cd05097 150 -FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLC 228 (295)
T ss_pred -eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999865433221 122356788998743 2345666676 56666642
Q ss_pred CCCCCCC
Q psy6542 218 NRLELHP 224 (334)
Q Consensus 218 ~~~~~~~ 224 (334)
+..||..
T Consensus 229 ~~~p~~~ 235 (295)
T cd05097 229 KEQPYSL 235 (295)
T ss_pred CCCCCcc
Confidence 3445433
No 308
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=8.6e-25 Score=196.26 Aligned_cols=185 Identities=16% Similarity=0.152 Sum_probs=145.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.+..+|+.||||.+...... ...+.+.+|+++++.++|+|+ +++++++..++.+|+||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 11 QGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYV--------VKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred ecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCe--------eeEEEEEccCCeEEEEEEec
Confidence 456779999999999999999999866543 345678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+|+ +..+.... ........+.++.|++.||.|||+ .+ ++||||+|+||++++++.++|
T Consensus 82 ~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~~----------------~~H~~l~~~ni~~~~~~~~~l 141 (264)
T cd06623 82 DGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKRH----------------IIHRDIKPSNLLINSKGEVKI 141 (264)
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccCC----------------CccCCCCHHHEEECCCCCEEE
Confidence 977 54433322 222555666778899999999999 99 999999999999999999999
Q ss_pred EecccccccCCCCCC--ccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPH--ASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~--~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++......... ...++..|++||..... +..+|.|+ ++|++++ +..||....
T Consensus 142 ~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~t-g~~p~~~~~ 204 (264)
T cd06623 142 ADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECAL-GKFPFLPPG 204 (264)
T ss_pred ccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccc
Confidence 999999877554433 34567889999974322 34566666 5566654 566664443
No 309
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=1.2e-24 Score=196.33 Aligned_cols=185 Identities=12% Similarity=0.120 Sum_probs=138.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCC------eE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPN------SH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~------~~ 84 (334)
.++.+.||+|.++.+++.||+|++..... ....+.+|+++++.+ +|+|| +++++++.... .+
T Consensus 16 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i--------~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 16 EGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNI--------ATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred CCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCCh--------heEEEEEEecCCCCcceEE
Confidence 45667899999999999999999886543 234677899999998 69999 99999997544 48
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
|+||||++++ +..+...............+..++.|++.||.|||+.+ ++|+||+|+||+++.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~----------------i~H~~l~p~ni~~~~ 148 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK----------------VIHRDIKGQNILLTK 148 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------cccCCCCHHHEEEcc
Confidence 9999999987 43332321101112245556677789999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCC--CCccccCccccccccccc-------cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKK--PHASVESDCILHGYIKKL-------GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~-------~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++.++|+|||++....... .....++..|++||+... ....+|+|+ ++|++ .++.+||..
T Consensus 149 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l-~~g~~p~~~ 220 (275)
T cd06608 149 NAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIEL-ADGKPPLCD 220 (275)
T ss_pred CCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHH-HhCCCCccc
Confidence 9999999999997654332 234557888999997421 133567777 44555 556777643
No 310
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=1e-24 Score=195.17 Aligned_cols=183 Identities=16% Similarity=0.093 Sum_probs=142.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+++.++||+|.+..++..||||.+..... .....+.+.+|+++++.++|+|+ +++++++.+++.+|++|
T Consensus 10 ~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 10 SGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI--------VQYLGTEREEDNLYIFL 81 (258)
T ss_pred ecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc--------hheeeeEecCCeEEEEE
Confidence 56778999999999999999999976543 23345678889999999999999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ ++.+.... ..........++.|++.||.|||+.+ ++|+||+|+||+++.++.+
T Consensus 82 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~~~ni~~~~~~~~ 141 (258)
T cd06632 82 ELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLHDRN----------------TVHRDIKGANILVDTNGVV 141 (258)
T ss_pred EecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCCCE
Confidence 999987 44332221 12244555667789999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCC-CCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK-PHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 168 kl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
||+|||++....... .....++..|++||.... ....+|.|+ ++|+++. +..||.
T Consensus 142 kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~-g~~pf~ 203 (258)
T cd06632 142 KLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT-GKPPWS 203 (258)
T ss_pred EEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh-CCCCcc
Confidence 999999998665443 334557888999997432 234566666 5555554 555653
No 311
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93 E-value=1.1e-24 Score=196.27 Aligned_cols=183 Identities=15% Similarity=0.137 Sum_probs=139.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc----chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH----ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~----~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.++.+.||+|.. .+|+.+|||.++.... .......+.+|+++++.++|+|| +++++++.+++.+|++
T Consensus 10 ~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv 80 (265)
T cd06631 10 KGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI--------VQYLGTCLDDNTISIF 80 (265)
T ss_pred ccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE--------eeEeeEeecCCeEEEE
Confidence 466779999976 4789999999986543 22233568889999999999999 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||++|+ ++.+.... ..+ ....+..++.|++.||.|||+.+ ++|+||+|+||++++++.
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dl~p~nil~~~~~~ 140 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPL---PEPVFCKYTKQILDGVAYLHNNC----------------VVHRDIKGNNVMLMPNGI 140 (265)
T ss_pred EecCCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCcCHHhEEECCCCe
Confidence 9999988 54443322 122 44555567789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCC--------CCCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKK--------KPHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 167 vkl~DFGla~~~~~~--------~~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++|+|||++...... ......|+..|++||+... . ...+|+|+ ++|++ ..+.+||..
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l-~~g~~p~~~ 210 (265)
T cd06631 141 IKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM-ATGKPPLAS 210 (265)
T ss_pred EEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH-HhCCCcccc
Confidence 999999999865321 1123457888999998532 2 45666777 45555 556667644
No 312
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93 E-value=1.5e-25 Score=210.22 Aligned_cols=183 Identities=19% Similarity=0.149 Sum_probs=139.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ 85 (334)
.++.+.||+|.++.+|+.||||.+............+.+|+++++.++|||| +++++++... ..+|
T Consensus 25 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~~~~~ 96 (342)
T cd07879 25 SGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV--------IGLLDVFTSAVSGDEFQDFY 96 (342)
T ss_pred ecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCc--------cchhheecccccCCCCceEE
Confidence 3677899999999999999999998654433345567889999999999999 9999988754 3469
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||||+.+.+..+... .+ ....+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 97 lv~e~~~~~l~~~~~~---~~---~~~~~~~~~~qi~~aL~~LH~~~----------------i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 97 LVMPYMQTDLQKIMGH---PL---SEDKVQYLVYQMLCGLKYIHSAG----------------IIHRDLKPGNLAVNEDC 154 (342)
T ss_pred EEecccccCHHHHHcC---CC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCHHHEEECCCC
Confidence 9999998765333211 22 34445567789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.+||+|||+++..... .....++..|++||+... ....+|+|+ ++|+++ .+..||.+.+
T Consensus 155 ~~kL~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~-~g~~pf~~~~ 219 (342)
T cd07879 155 ELKILDFGLARHADAE-MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKD 219 (342)
T ss_pred CEEEeeCCCCcCCCCC-CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999999999865433 233456788999997432 244566666 555554 5677887654
No 313
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93 E-value=1.3e-24 Score=196.45 Aligned_cols=239 Identities=11% Similarity=0.031 Sum_probs=164.5
Q ss_pred CCCCceEEEeceeCCC---CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPL---GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~---~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++.+.||+|.+..+ ...||||....... ....+.+.+|+.+++.++|||| +++++++.+ +..|+|
T Consensus 15 g~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i--------~~~~~~~~~-~~~~lv 84 (270)
T cd05056 15 GEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHI--------VKLIGVITE-NPVWIV 84 (270)
T ss_pred CCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCch--------hceeEEEcC-CCcEEE
Confidence 3577789999987654 45789998875543 2344578889999999999999 999998865 557899
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.++ +..+....... ......+.++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 85 ~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~----------------~~H~dl~p~nili~~~~~ 145 (270)
T cd05056 85 MELAPLGELRSYLQVNKYS---LDLASLILYSYQLSTALAYLESKR----------------FVHRDIAARNVLVSSPDC 145 (270)
T ss_pred EEcCCCCcHHHHHHhCCCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eeccccChheEEEecCCC
Confidence 9999887 44333322112 245556677789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCC---ccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 167 VRISDLGLACDFSKKKPH---ASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~---~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
++|+|||+++........ ...++..|++||... . ....+|+|+ ++|+++..+..||.+.+......
T Consensus 146 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~------ 219 (270)
T cd05056 146 VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG------ 219 (270)
T ss_pred eEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH------
Confidence 999999999866444221 122345688999742 2 244677777 66777766777775443110000
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHHHh
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMARKA 311 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~~~ 311 (334)
.+.+.. +. +..+..++.+.+ +..++...+|..|+ +.++++++....
T Consensus 220 -------------------~~~~~~--~~----~~~~~~~~~~~~--li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 220 -------------------RIENGE--RL----PMPPNCPPTLYS--LMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred -------------------HHHcCC--cC----CCCCCCCHHHHH--HHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000 00 111233444445 77788888888888 888888877643
No 314
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=5e-25 Score=200.38 Aligned_cols=188 Identities=19% Similarity=0.139 Sum_probs=141.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc---CCCCcccccccceeeEEEEeecCCe----
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL---RNEPFKKCVLLFKMNLYKVTSEPNS---- 83 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l---~h~~i~~~~~~~~v~~~~~~~~~~~---- 83 (334)
..++...||++.++.+++.||||.++...........+.+|+.+++++ +|+|+ +++++++...+.
T Consensus 8 ~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i--------~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 8 GEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNI--------VRLLDVCHGPRTDREL 79 (287)
T ss_pred cccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCc--------ceEEEEEeeccCCCCc
Confidence 356677999999999999999999986655433445566788887766 59999 999999987766
Q ss_pred -EEEEEEccCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 84 -HYIIGVRQSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 84 -~~ivmEy~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
++++|||+.+.+ +++.......+ .....+.++.|++.||.|||+.+ ++|+||+|+||++
T Consensus 80 ~~~l~~e~~~~~l~~~l~~~~~~~l---~~~~~~~~~~~i~~al~~LH~~~----------------i~h~~l~~~nili 140 (287)
T cd07838 80 KLTLVFEHVDQDLATYLSKCPKPGL---PPETIKDLMRQLLRGVDFLHSHR----------------IVHRDLKPQNILV 140 (287)
T ss_pred eeEEEehhcccCHHHHHHHccCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeeccCChhhEEE
Confidence 999999999874 33322221122 45566777889999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCCCC-CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 162 DEHGHVRISDLGLACDFSKKKP-HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.++.++|+|||++........ ....++..|++||+.. .....+|.|+ ++|+++ ++.+||.+.+
T Consensus 141 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~-~~~~~~~~~~ 210 (287)
T cd07838 141 TSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTS 210 (287)
T ss_pred ccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHH-hCCCcccCCC
Confidence 9999999999999987654432 2334677889999743 2244566666 555554 5577776554
No 315
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=1.1e-24 Score=198.34 Aligned_cols=187 Identities=11% Similarity=0.030 Sum_probs=138.7
Q ss_pred CCCceEEEecee-----CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSL-----KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~-----~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++...||++.. ..++..+|+|.+..... .....+.+|+++++.++|+|| +++++++.+++..|+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~l 84 (280)
T cd05092 15 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--SARQDFQREAELLTVLQHQHI--------VRFYGVCTEGRPLLM 84 (280)
T ss_pred CccCCeEEEeEEecCCCCCCceEEEEEecCcCCH--HHHHHHHHHHHHHhcCCCCCC--------ceEEEEEecCCceEE
Confidence 366778998864 34677899998875432 344578889999999999999 999999999999999
Q ss_pred EEEccCCC-hh-HHhhhhhh----------hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC
Q psy6542 87 IGVRQSGP-KD-QISRSKIN----------RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL 154 (334)
Q Consensus 87 vmEy~~g~-l~-~l~~~~~~----------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl 154 (334)
+|||+.++ +. ++...... ..........+.++.|++.||.|||+++ ++||||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~----------------i~H~dl 148 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH----------------FVHRDL 148 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC----------------eecccc
Confidence 99999887 43 33222100 0011245566778889999999999999 999999
Q ss_pred CCCceeeCCCCCEEEEecccccccCCCCC----CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 155 KPANILLDEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 155 Kp~NiLl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
||+||++++++.+||+|||+++....... ....++..|++||+.. .. ...+|+|+ ++|+++..+.+||..
T Consensus 149 kp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 227 (280)
T cd05092 149 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ 227 (280)
T ss_pred cHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999999999986543321 1223356789999743 22 44567777 667777667777644
No 316
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.93 E-value=3e-24 Score=195.54 Aligned_cols=179 Identities=14% Similarity=0.072 Sum_probs=131.4
Q ss_pred CCCCceEEEece----eCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeE
Q psy6542 11 SRVSKWRVKPPS----LKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~----~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~ 84 (334)
.+++...||++. +..++..||||.+..... ...+.+.+|+++++.++|||| +++++++.. ...+
T Consensus 13 g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~~ 82 (284)
T cd05081 13 GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNI--------VKYKGVCYSAGRRNL 82 (284)
T ss_pred cCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCe--------eEEEEEEccCCCCce
Confidence 345667899887 456899999999875432 234567889999999999999 999988653 3568
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
++||||++|+ +..+....... ......+.++.|++.||.|||+++ ++||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~---l~~~~~~~~~~~l~~aL~~LH~~~----------------i~H~dlkp~nili~~ 143 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRER---LDHRKLLLYASQICKGMEYLGSKR----------------YVHRDLATRNILVES 143 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcC---CCHHHHHHHHHHHHHHHHHHHHCC----------------ceeccCCHhhEEECC
Confidence 9999999887 54332221112 245556677789999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCCCC-----ccccCcccccccccc--ccCCcceeeh---hHHHHHcCC
Q psy6542 164 HGHVRISDLGLACDFSKKKPH-----ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPN 218 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~~~-----~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~ 218 (334)
++.+||+|||+++........ ...++..|++||+.. ..+..+|+|+ ++|+++.+.
T Consensus 144 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~ 208 (284)
T cd05081 144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS 208 (284)
T ss_pred CCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcC
Confidence 999999999999876543321 112234578888743 2244566666 667776543
No 317
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=1.2e-25 Score=209.45 Aligned_cols=187 Identities=20% Similarity=0.198 Sum_probs=146.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-----eEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN-----SHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~-----~~~i 86 (334)
+++...||+|.+..+|+.||||.+.....+....+.+.+|+++++.++|+|| +++++++...+ .+|+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 10 SGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI--------IGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred CCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcch--------hhhhhhhcccCcccccceEE
Confidence 4667799999999999999999998765444556678889999999999999 99999988765 7899
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
+|||+++++..+.... .......++.++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 82 v~e~~~~~l~~~l~~~----~~l~~~~~~~i~~~l~~~l~~LH~~g----------------i~H~dlkp~nili~~~~~ 141 (330)
T cd07834 82 VTELMETDLHKVIKSP----QPLTDDHIQYFLYQILRGLKYLHSAN----------------VIHRDLKPSNILVNSNCD 141 (330)
T ss_pred EecchhhhHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCCC
Confidence 9999998753332222 12245556677889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCC-----CCccccCcccccccccc---ccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKK-----PHASVESDCILHGYIKK---LGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 167 vkl~DFGla~~~~~~~-----~~~~~~t~~~~~~~v~~---~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
++|+|||++....... .....++..|++||+.. .....+|+|+ ++...++++.+||.+.+
T Consensus 142 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~ 211 (330)
T cd07834 142 LKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211 (330)
T ss_pred EEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence 9999999998765543 23345678899999842 2344567777 44444566777887665
No 318
>KOG1095|consensus
Probab=99.93 E-value=6.4e-25 Score=223.19 Aligned_cols=232 Identities=14% Similarity=0.071 Sum_probs=174.0
Q ss_pred CCCceEEEeceeCCCCCc-----EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFP-----IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~-----vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
++-++.||.|........ ||||.+++..... ....|.+|..+|++++|||| |++.+++.+....+|
T Consensus 702 ~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~-~~~~Fl~Ea~~m~~f~HpNi--------v~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 702 KGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQ-EVSDFLKEALLMSKFDHPNI--------VSLIGVCLDSGPPLI 772 (1025)
T ss_pred cccccceEEEEEecCCCCccceEEEEEeccccCCHH-HHHHHHHHHHHHhcCCCcce--------eeEEEeecCCCCcEE
Confidence 466789999988755544 8999998766543 44578889999999999999 999999999999999
Q ss_pred EEEccCCC--hhHHhhhhhhh--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 87 IGVRQSGP--KDQISRSKINR--YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 87 vmEy~~g~--l~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
++|||.|| +.++...+... .+.+....++.++.||+.|+.||++++ +|||||...|+|++
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~----------------fvHRDLAaRNCLL~ 836 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH----------------FVHRDLAARNCLLD 836 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC----------------CcCcchhhhheeec
Confidence 99999999 45554443222 234467778899999999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCCCCcccc----Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccc
Q psy6542 163 EHGHVRISDLGLACDFSKKKPHASVE----SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPEL 233 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~~~~~~~----t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~ 233 (334)
.+..|||+|||+|+.+.........+ ...+||||... ..++++|+|+ ++||.+.-+..||...+.. ++
T Consensus 837 ~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~---~v 913 (1025)
T KOG1095|consen 837 ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF---EV 913 (1025)
T ss_pred ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH---HH
Confidence 99999999999999554443322222 36789999854 3367888888 9999999999997655521 11
Q ss_pred hhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch
Q psy6542 234 IFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC 299 (334)
Q Consensus 234 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~ 299 (334)
+ ...+ + +..+++.+.+|..+..+|..||...+..+...
T Consensus 914 ~---------------------~~~~-~------ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F 951 (1025)
T KOG1095|consen 914 L---------------------LDVL-E------GGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSF 951 (1025)
T ss_pred H---------------------HHHH-h------CCccCCCCCCChHHHHHHHHHccCChhhCccH
Confidence 1 1111 1 11333457778888998888887765444433
No 319
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=1e-24 Score=196.66 Aligned_cols=183 Identities=15% Similarity=0.077 Sum_probs=135.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.+..++ .||||.++..... .+.+.+|+++++.++|+|| +++++++. .+..|+||||+
T Consensus 16 ~g~~~~v~~~~~~~~~-~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i--------~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 16 QGCFGEVWMGTWNGTT-RVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKL--------VQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred CCCCCcEEEEEecCCc-eEEEEecccCccC---HHHHHHHHHHHHhCCCCCc--------ceEEEEEC-CCCcEEEEEcC
Confidence 3566689999887654 5999999864432 2457789999999999999 99998875 45679999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+...... ........+.++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~----------------i~H~dl~p~Nill~~~~~~~L~ 144 (262)
T cd05071 83 SKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERMN----------------YVHRDLRAANILVGENLVCKVA 144 (262)
T ss_pred CCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHCC----------------ccccccCcccEEEcCCCcEEec
Confidence 987 4333222111 11244556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC---ccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH---ASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~---~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||+++........ ...++..|++||+.. .. ...+|+|+ ++|++++++.+||.+.
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~ 207 (262)
T cd05071 145 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 207 (262)
T ss_pred cCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999866544321 223456789999743 22 44566666 6777777677776543
No 320
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93 E-value=1.9e-24 Score=195.18 Aligned_cols=184 Identities=17% Similarity=0.169 Sum_probs=137.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~i 86 (334)
.++.+.||+|.+..+|..||+|.+..... .....+.+.+|+.+++.++|||| +++++++.+ ++.+++
T Consensus 12 ~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 12 QGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI--------VQYYGCLRDRAEKTLTI 83 (266)
T ss_pred CCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCe--------eeEEEEEEcCCCCEEEE
Confidence 35677999999999999999999876543 22334567889999999999999 999998875 467899
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||++++ +....... ..+ .....+.++.|++.||.|||+.+ ++||||||+||++++++
T Consensus 84 ~~e~~~~~~L~~~l~~~-~~l---~~~~~~~~~~qi~~~l~~LH~~~----------------i~H~~l~p~nil~~~~~ 143 (266)
T cd06651 84 FMEYMPGGSVKDQLKAY-GAL---TESVTRKYTRQILEGMSYLHSNM----------------IVHRDIKGANILRDSAG 143 (266)
T ss_pred EEeCCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeeCCCCHHHEEECCCC
Confidence 99999887 43332221 122 34445567789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCC-----CCccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKK-----PHASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~-----~~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.++|+|||+++...... .....++..|++||..... +..+|+|+ ++|+++. +..||..
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~-g~~pf~~ 211 (266)
T cd06651 144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAE 211 (266)
T ss_pred CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH-CCCCccc
Confidence 99999999998653321 1224467889999974322 34566676 5566554 5666643
No 321
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=3e-24 Score=195.05 Aligned_cols=182 Identities=16% Similarity=0.110 Sum_probs=140.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..+++.||||.+...... ...+.+.+|+.+++.++|||| +++++++..++.+|+||||+
T Consensus 14 ~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 14 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV--------TKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred ecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCE--------eEEEEEEEeCCeEEEEEEeC
Confidence 467789999999999999999998754432 234567889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.... . ........++.|++.|+.|||+.+ ++|+||||+||++++++.++|+
T Consensus 85 ~~~~l~~~i~~~--~---~~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~dl~p~Ni~i~~~~~~~l~ 143 (277)
T cd06641 85 GGGSALDLLEPG--P---LDETQIATILREILKGLDYLHSEK----------------KIHRDIKAANVLLSEHGEVKLA 143 (277)
T ss_pred CCCcHHHHHhcC--C---CCHHHHHHHHHHHHHHHHHHccCC----------------eecCCCCHHhEEECCCCCEEEe
Confidence 988 43332221 2 244555677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++....... .....++..|++||.... ....+|.|+ ++|++ .++.+||..
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l-~~g~~p~~~ 203 (277)
T cd06641 144 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-AKGEPPHSE 203 (277)
T ss_pred ecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHH-HcCCCCCCc
Confidence 999997664432 223456778899997432 244566666 45555 456667643
No 322
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93 E-value=2.3e-24 Score=195.98 Aligned_cols=185 Identities=15% Similarity=0.066 Sum_probs=136.9
Q ss_pred CCCceEEEeceeCCCCC----cEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGF----PIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~----~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.++...||+|..+.+|. .||+|.+..... ......+.+|+.+++.++|+|+ +++++++.. ...++|
T Consensus 17 ~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~-~~~~~v 86 (279)
T cd05057 17 SGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHV--------VRLLGICLS-SQVQLI 86 (279)
T ss_pred CCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCc--------ceEEEEEec-CceEEE
Confidence 46677999999887765 589998876544 3344567789999999999999 999999887 788999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|||+.++ +.......... .....++.++.|++.||.|||+++ ++||||||+||++++++.
T Consensus 87 ~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~----------------i~H~di~p~nil~~~~~~ 147 (279)
T cd05057 87 TQLMPLGCLLDYVRNHKDN---IGSQYLLNWCVQIAKGMSYLEEKR----------------LVHRDLAARNVLVKTPQH 147 (279)
T ss_pred EecCCCCcHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHhCC----------------EEecccCcceEEEcCCCe
Confidence 9999888 43332222112 245566778889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCc----cccCcccccccccc-ccC-Ccceeeh---hHHHHHcCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKPHA----SVESDCILHGYIKK-LGG-PFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~----~~~t~~~~~~~v~~-~~~-~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+||+|||+++......... ..++..|++||... ..+ ..+|.|+ ++|+++..+..||.+.
T Consensus 148 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 148 VKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred EEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999998765433211 11245688888743 333 3556666 5566665467776543
No 323
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=1.4e-24 Score=195.17 Aligned_cols=183 Identities=15% Similarity=0.045 Sum_probs=135.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||+|... .+..||+|.++..... ...+.+|+.++++++|+|+ +++++++. .+..|++|||+
T Consensus 16 ~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i--------~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 16 NGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKL--------VQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred cccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCce--------EEEEeEEC-CCCcEEEEEec
Confidence 4666789999766 5677999999865442 2357789999999999999 99998875 45689999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+..... ...........++.|++.||.|||+++ ++||||||+||++++++.++|+
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~----------------i~H~di~p~Nili~~~~~~~l~ 144 (260)
T cd05070 83 SKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMN----------------YIHRDLRSANILVGDGLVCKIA 144 (260)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCccceEEEeCCceEEeC
Confidence 887 433322211 112245556777889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC---ccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH---ASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~---~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++......... ...++..|++||+.. .....+|+|+ ++|++++.+.+||.+.
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~ 207 (260)
T cd05070 145 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207 (260)
T ss_pred CceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 99999866543321 122345689999742 2344667777 6777777677777543
No 324
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=4.1e-25 Score=199.22 Aligned_cols=183 Identities=20% Similarity=0.218 Sum_probs=136.7
Q ss_pred CCceEEEeceeC----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 13 VSKWRVKPPSLK----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 13 ~~~~~V~~a~~~----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
|+++.||+|... ..+..|+||.++.... ....+.+.+|++++++++|||| +++++++...+.+++||
T Consensus 10 G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni--------~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 10 GSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS-EEEEEEFLNEIQILRKLRHPNI--------VKLYGFCIENEPLFLVM 80 (259)
T ss_dssp ESSEEEEEEEEESTTTSSEEEEEEEEESTTSS-HHHHHHHHHHHHHHHTHSBTTB--------E-EEEEEESSSSEEEEE
T ss_pred CCCcEEEEEEEEcccCCCCEEEEEEEeccccc-cccceeeeeccccccccccccc--------ccccccccccccccccc
Confidence 566789998887 6678899999965333 3345678889999999999999 99999999888899999
Q ss_pred EccCCC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 89 VRQSGP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 89 Ey~~g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
||+.+| ++ ++.......+ .....+.|+.|++.||.|||+++ ++|+||+++||++++++.
T Consensus 81 e~~~~g~L~~~L~~~~~~~~---~~~~~~~i~~~i~~~l~~Lh~~~----------------iiH~~l~~~nill~~~~~ 141 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPL---SEQQRLSIAIQIAEALSYLHSNN----------------IIHGNLSPSNILLDSNGQ 141 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTS---BHHHHHHHHHHHHHHHHHHHHTT----------------EEEST-SGGGEEEETTTE
T ss_pred cccccccccccccccccccc---ccccccccccccccccccccccc----------------cccccccccccccccccc
Confidence 999977 44 4433312233 45566788889999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+||+|||++........ ........|++||... .....+|+|+ ++||++..+..|+.
T Consensus 142 ~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~ 207 (259)
T PF07714_consen 142 VKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFS 207 (259)
T ss_dssp EEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999987733221 2223456788998843 2355777777 77888776666653
No 325
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.93 E-value=1.9e-24 Score=194.31 Aligned_cols=183 Identities=16% Similarity=0.098 Sum_probs=136.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||+|..+. ++.||+|.+...... ...+.+|+.+++.++|+|+ +++++++. .+.+|++|||+
T Consensus 16 ~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i--------~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 16 AGQFGEVWMGYYNG-HTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRL--------VRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred cCccceEEeeecCC-CceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCe--------eeEEEEEc-cCCcEEEEEcC
Confidence 46677999998654 788999999865542 2357789999999999999 99998874 56789999999
Q ss_pred CCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.++ + +.+.......+ .....+.++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 83 ~~~~L~~~~~~~~~~~~---~~~~~~~i~~~i~~al~~LH~~~----------------i~H~dl~p~ni~i~~~~~~~l 143 (260)
T cd05067 83 ENGSLVDFLKTPEGIKL---TINKLIDMAAQIAEGMAFIERKN----------------YIHRDLRAANILVSETLCCKI 143 (260)
T ss_pred CCCCHHHHHHhcCCCCC---CHHHHHHHHHHHHHHHHHHhcCC----------------eecccccHHhEEEcCCCCEEE
Confidence 887 4 33322221122 44556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCC---ccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPH---ASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~---~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++......... ...++..|++||+.... +..+|+|+ ++|+++..+.+||.+.+
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 144 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred ccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999876533221 22345678999975322 34566666 66777765787875543
No 326
>KOG1094|consensus
Probab=99.93 E-value=2.2e-25 Score=210.70 Aligned_cols=176 Identities=13% Similarity=0.066 Sum_probs=143.5
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+-++.|.+|.-.. +..||+|.++...... ..+.|..|+++|.+|+|||| |.+++++..++.+++||||++
T Consensus 549 GqFGEVhLCeveg-~lkVAVK~Lr~~a~~~-~r~~F~kEIkiLsqLkhPNI--------veLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 549 GQFGEVHLCEVEG-PLKVAVKILRPDATKN-ARNDFLKEIKILSRLKHPNI--------VELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred cccceeEEEEecC-ceEEEEeecCcccchh-HHHHHHHHHHHHhccCCCCe--------eEEEeeeecCCchHHHHHHHh
Confidence 4566888887555 7899999999877644 35678899999999999999 999999999999999999999
Q ss_pred CC-hh-HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 93 GP-KD-QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 93 g~-l~-~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+| +. ++..+.. . .......+.|+.||++|+.||.+-+ ++||||.+.|+|++.++++||+
T Consensus 619 nGDLnqFl~ahea-p--t~~t~~~vsi~tqiasgmaYLes~n----------------fVHrd~a~rNcLv~~e~~iKia 679 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL-P--TAETAPGVSICTQIASGMAYLESLN----------------FVHRDLATRNCLVDGEFTIKIA 679 (807)
T ss_pred cCcHHHHHHhccC-c--ccccchhHHHHHHHHHHHHHHHhhc----------------hhhccccccceeecCcccEEec
Confidence 88 43 4433322 1 1355566789999999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCcccc----Ccccccccc--ccccCCcceeeh---hHHHHHcC
Q psy6542 171 DLGLACDFSKKKPHASVE----SDCILHGYI--KKLGGPFVSAWQ---TRYAKLFP 217 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~----t~~~~~~~v--~~~~~~~~~~w~---~~~~~l~~ 217 (334)
|||.++.+-.+......| ...||++|. ..+.++.+|+|. ++||++..
T Consensus 680 dfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~ 735 (807)
T KOG1094|consen 680 DFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFML 735 (807)
T ss_pred CcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHH
Confidence 999999877766544433 467888885 455577888888 88888753
No 327
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.92 E-value=4.5e-24 Score=191.89 Aligned_cols=187 Identities=15% Similarity=0.113 Sum_probs=143.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++....++..||||++....... ..+.+.+|+++++.++|+|+ +++++.+..++..|+||||+
T Consensus 11 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 11 VGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNV--------VKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCE--------EEEEEEEeeCCEEEEEEecc
Confidence 4667899999999999999999998655433 44578889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+...... ........+..++.|++.||.|||+.+ ++||||||+||++++++.++|+
T Consensus 82 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~----------------i~h~~l~p~ni~~~~~~~~~l~ 144 (267)
T cd06610 82 SGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG----------------QIHRDIKAGNILLGEDGSVKIA 144 (267)
T ss_pred CCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHhEEEcCCCCEEEc
Confidence 988 4333332211 112245556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC------CccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP------HASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~------~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++........ ....|+..|++||+... ....+|.|+ ++|+++ ++..||...
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~-~g~~p~~~~ 210 (267)
T cd06610 145 DFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA-TGAAPYSKY 210 (267)
T ss_pred ccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH-hCCCCcccc
Confidence 9999986654432 23457888999997432 234566666 555555 466676543
No 328
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.92 E-value=4.1e-24 Score=193.04 Aligned_cols=184 Identities=18% Similarity=0.140 Sum_probs=140.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++.+..++..||+|.+..... ...+.+.+|+.+++.++|+|| +++++++..++.+++||||+
T Consensus 18 ~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 18 KGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNI--------VQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred cCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCe--------eeeeeeeccCCEEEEEEecC
Confidence 57788999999999999999999875443 234578889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~~vkl 169 (334)
.|+ +............ .....+..++.|++.||.|||+++ |+||||||+||+++. ++.++|
T Consensus 88 ~~~~L~~~l~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~~----------------i~h~dl~p~nil~~~~~~~~~l 150 (268)
T cd06624 88 PGGSLSALLRSKWGPLK-DNEQTIIFYTKQILEGLKYLHDNQ----------------IVHRDIKGDNVLVNTYSGVVKI 150 (268)
T ss_pred CCCCHHHHHHHhcccCC-CcHHHHHHHHHHHHHHHHHHHHCC----------------EeecCCCHHHEEEcCCCCeEEE
Confidence 987 5443333211110 133445566779999999999999 999999999999976 678999
Q ss_pred EecccccccCCCC--CCccccCccccccccccc----cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIKKL----GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~----~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+|||++....... .....++..|++||+... ....+|+|+ ++|+++. +..||.
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~-g~~p~~ 212 (268)
T cd06624 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT-GKPPFI 212 (268)
T ss_pred ecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh-CCCCCc
Confidence 9999997654322 223356788999997432 245677777 5666655 556654
No 329
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.92 E-value=2.7e-24 Score=196.61 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=137.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecC-----CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEP-----NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~-----~~~~ 85 (334)
.++...||++.++.+++.||+|++..... ....+.+|+.+++.+ +|||+ +++++++... +.+|
T Consensus 32 ~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni--------~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 32 KGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNV--------VKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCe--------EEEEEEEEeccccCCCeeE
Confidence 45567999999999999999999975432 234566799999998 89999 9999998743 4689
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||++|+ +..+...............++.++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~----------------ivH~dlkp~nili~~~ 164 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR----------------IIHRDVKGNNILLTTE 164 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHEEEcCC
Confidence 999999987 43333221111122245556777889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCC--CCccccCccccccccccc-------cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKK--PHASVESDCILHGYIKKL-------GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~~-------~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+.+||+|||++....... .....++..|++||+... .+..+|+|+ ++|+++ .+.+||..
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~-~g~~p~~~ 235 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG-DGDPPLFD 235 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh-hCCCCCCC
Confidence 999999999998654432 233467888999997422 234566666 555554 56667644
No 330
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.92 E-value=2.2e-25 Score=205.24 Aligned_cols=188 Identities=19% Similarity=0.177 Sum_probs=139.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--------CCe
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--------PNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--------~~~ 83 (334)
.++...||+|.++.+++.||||.+............+.+|+++++.++|||| +++++++.+ ...
T Consensus 18 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~~~~ 89 (311)
T cd07866 18 EGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNV--------VPLIDMAVERPDKSKRKRGS 89 (311)
T ss_pred cCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCc--------cchhhheecccccccccCce
Confidence 4667899999999999999999997655433334456789999999999999 888887653 335
Q ss_pred EEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 84 HYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 84 ~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+|+||||+.+++..........+ ....+..++.|++.||.|||+.+ ++||||||+||++++
T Consensus 90 ~~lv~~~~~~~l~~~~~~~~~~~---~~~~~~~i~~~l~~al~~lH~~~----------------i~H~dl~p~nil~~~ 150 (311)
T cd07866 90 VYMVTPYMDHDLSGLLENPSVKL---TESQIKCYMLQLLEGINYLHENH----------------ILHRDIKAANILIDN 150 (311)
T ss_pred EEEEEecCCcCHHHHHhccccCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEECC
Confidence 79999999988433323221223 45556677789999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCCC-------------CccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKKP-------------HASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~~-------------~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++.++|+|||+++....... ....+++.|++||+... ....+|+|+ ++|++ ..+.+||.+
T Consensus 151 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el-~~g~~~~~~ 229 (311)
T cd07866 151 QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEM-FTRRPILQG 229 (311)
T ss_pred CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHH-HhCCCCCCC
Confidence 99999999999986543321 11245677999997422 244567777 45555 556777766
Q ss_pred CCC
Q psy6542 225 ESG 227 (334)
Q Consensus 225 ~~~ 227 (334)
.+.
T Consensus 230 ~~~ 232 (311)
T cd07866 230 KSD 232 (311)
T ss_pred CCH
Confidence 553
No 331
>KOG4257|consensus
Probab=99.92 E-value=6.3e-25 Score=208.95 Aligned_cols=227 Identities=11% Similarity=0.058 Sum_probs=169.7
Q ss_pred CCceEEEeceeCC----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 13 VSKWRVKPPSLKP----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 13 ~~~~~V~~a~~~~----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
|.++-||++.... ..-.||||..+.+...+. .+.|..|..+|++++|||| |++.+++. .+..||||
T Consensus 400 GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphI--------ikLIGv~~-e~P~Wivm 469 (974)
T KOG4257|consen 400 GQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHI--------IKLIGVCV-EQPMWIVM 469 (974)
T ss_pred CcccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcch--------hheeeeee-ccceeEEE
Confidence 5667889887643 345589999988766443 5678889999999999999 99999995 56899999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|++.-| +.......... +....+..+++||+.||.|||+.+ ++||||...|||+.+..+|
T Consensus 470 EL~~~GELr~yLq~nk~s---L~l~tL~ly~~Qi~talaYLeSkr----------------fVHRDIAaRNiLVsSp~CV 530 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDS---LPLRTLTLYCYQICTALAYLESKR----------------FVHRDIAARNILVSSPQCV 530 (974)
T ss_pred ecccchhHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHhhc----------------hhhhhhhhhheeecCccee
Confidence 999988 53333332222 255666778899999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCC-Ccccc--Cccccccccc--cccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhcccc
Q psy6542 168 RISDLGLACDFSKKKP-HASVE--SDCILHGYIK--KLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQI 239 (334)
Q Consensus 168 kl~DFGla~~~~~~~~-~~~~~--t~~~~~~~v~--~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 239 (334)
||+||||+|.+..... ..+.| ..-+|+||-. +..++.+|+|- |+||.+..|.-||.+-.+. ++|
T Consensus 531 KLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs---DVI----- 602 (974)
T KOG4257|consen 531 KLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS---DVI----- 602 (974)
T ss_pred eecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---ceE-----
Confidence 9999999998766653 33334 5677888863 44466667776 9999999999998876532 111
Q ss_pred cccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch
Q psy6542 240 EEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC 299 (334)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~ 299 (334)
..+ +-..|+.+| +.+||.+..++-+||.-++..+.+.
T Consensus 603 -----------------~~i--EnGeRlP~P----~nCPp~LYslmskcWayeP~kRPrf 639 (974)
T KOG4257|consen 603 -----------------GHI--ENGERLPCP----PNCPPALYSLMSKCWAYEPSKRPRF 639 (974)
T ss_pred -----------------EEe--cCCCCCCCC----CCCChHHHHHHHHHhccCcccCCcH
Confidence 001 011235555 7888999998888888776555554
No 332
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=1.1e-24 Score=196.91 Aligned_cols=241 Identities=15% Similarity=0.038 Sum_probs=160.7
Q ss_pred CCCceEEEeceeC---CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC------
Q psy6542 12 RVSKWRVKPPSLK---PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN------ 82 (334)
Q Consensus 12 ~~~~~~V~~a~~~---~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~------ 82 (334)
+++...||+|..+ .+++.||||++..........+.+.+|+++++.++|||+ +++++++...+
T Consensus 9 ~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 9 KGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNV--------IKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCc--------ceEEEEEccCCCCCccc
Confidence 4566688888754 468899999998765544445667889999999999999 99999886432
Q ss_pred eEEEEEEccCCC-hh-HHhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 83 SHYIIGVRQSGP-KD-QISRSKIN-RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 83 ~~~ivmEy~~g~-l~-~l~~~~~~-~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
..++++||+.++ +. ++...... ..........+.++.|++.||.|||+.+ |+||||||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dikp~ni 144 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN----------------FIHRDLAARNC 144 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------EeecccchhhE
Confidence 247888999887 43 33222111 1112345556778889999999999999 99999999999
Q ss_pred eeCCCCCEEEEecccccccCCCC----CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCc
Q psy6542 160 LLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSK 230 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~ 230 (334)
++++++.+||+|||+++...... .....+++.|++|+... .. ...+|+|+ ++|+++..+.+||.+......
T Consensus 145 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 145 MLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred EEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH
Confidence 99999999999999998664432 12223345677888642 22 44566666 667776657777654321100
Q ss_pred ccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 231 PELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
... +.. .. .....+..+..+.. +..+|.+.+|..|+ +.++++.+..
T Consensus 225 ~~~---------------------~~~---~~-------~~~~~~~~~~~~~~--l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 225 YNY---------------------LIK---GN-------RLKQPPDCLEDVYE--LMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHH---------------------HHc---CC-------cCCCCCCCCHHHHH--HHHHHcCCChhhCcCHHHHHHHHHh
Confidence 000 000 00 00011122333344 77788888888888 8888877754
No 333
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.92 E-value=4.5e-25 Score=198.41 Aligned_cols=181 Identities=12% Similarity=0.048 Sum_probs=135.1
Q ss_pred CCCceEEEeceeCCCCCc-------EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeE
Q psy6542 12 RVSKWRVKPPSLKPLGFP-------IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~-------vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
+++...||+|.++.++.. ||+|.+.... ....+.+.+|+.+++.++|||+ +++++++..++..
T Consensus 5 ~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~i--------v~~~~~~~~~~~~ 74 (258)
T cd05078 5 QGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHL--------VLNYGVCVCGDES 74 (258)
T ss_pred cccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCCh--------hheeeEEEeCCCc
Confidence 466778999988765544 8999886433 2234567789999999999999 9999999998999
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
++||||+++| ++.+.......+ .....+.++.|++.||.|||+++ |+||||||+||+++.
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~qi~~~l~~lH~~~----------------iiH~dlkp~nili~~ 135 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKNLI---NISWKLEVAKQLAWALHFLEDKG----------------LTHGNVCAKNVLLIR 135 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCCCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCccceEEEec
Confidence 9999999998 544433322122 34445677889999999999999 999999999999987
Q ss_pred CCC--------EEEEecccccccCCCCCCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 164 HGH--------VRISDLGLACDFSKKKPHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 164 ~~~--------vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
++. ++++|||++...... ....++..|++||+... . ...+|+|+ ++|+++.+..+|+.
T Consensus 136 ~~~~~~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~ 207 (258)
T cd05078 136 EEDRKTGNPPFIKLSDPGISITVLPK--EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS 207 (258)
T ss_pred ccccccCCCceEEecccccccccCCc--hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChh
Confidence 765 699999998755432 23456778999998543 2 33566666 66777666555543
No 334
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.92 E-value=2.3e-24 Score=193.99 Aligned_cols=183 Identities=14% Similarity=0.053 Sum_probs=135.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++.... +..||+|.++.... ....+.+|+++++.++|+|| +++++++.+ ...|++|||+
T Consensus 16 ~g~~~~vy~~~~~~-~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 16 AGQFGEVWMATYNK-HTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKL--------VKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred CccceEEEEEEecC-CccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCc--------ceEEEEEcC-CCeEEEEEeC
Confidence 56678999997554 66799999875432 23467789999999999999 999999887 7789999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+..... .........+.++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~----------------i~H~dl~p~ni~i~~~~~~~l~ 144 (260)
T cd05073 83 AKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN----------------YIHRDLRAANILVSASLVCKIA 144 (260)
T ss_pred CCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhCC----------------ccccccCcceEEEcCCCcEEEC
Confidence 887 433323211 111244456677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCC---ccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPH---ASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~---~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++......... ...++..|++||+... ....+|.|+ ++|++++++.+||.+.
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 207 (260)
T cd05073 145 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 207 (260)
T ss_pred CCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC
Confidence 99999866543221 1223456889997532 244566677 6677766678787544
No 335
>KOG2345|consensus
Probab=99.92 E-value=3.4e-25 Score=190.41 Aligned_cols=242 Identities=16% Similarity=0.088 Sum_probs=167.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-----CCeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-----PNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-----~~~~~i 86 (334)
.++.-.||++.+..++..+|+|.+.....+ ..+..++|++..++++|||+ ++++++... ....||
T Consensus 31 eGGfsfv~LV~~~s~~~~YAlKkI~c~~~~--~~e~~~rEid~~rkf~s~~v--------l~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 31 EGGFSFVDLVKGLSTGHLYALKKILCHSQE--DIEEALREIDNHRKFNSPNV--------LRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred CCCceeeeeecccCcccchhhheeeccchH--HHHHHHHHHHHHHhhCCcch--------HHHHHHHHHhhccCceeEEE
Confidence 466778999999999999999999876643 33456779999999999999 666554432 234899
Q ss_pred EEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 87 IGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 87 vmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
++.|...| .|.+...+.+. ...++..++.|+.++++||.+||+.. ||+.||||||+|||++++
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~iL~if~gic~gL~~lH~~~--------------~~yAH~DiKP~NILls~~ 165 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKG-NFVSEAQILWIFLGICRGLEALHEKE--------------PPYAHRDIKPANILLSDS 165 (302)
T ss_pred EeehhccccHHHHHHHHhhcC-CccCHHHHHHHHHHHHHHHHHHhccC--------------CcccccCCCcceeEecCC
Confidence 99976555 66665555433 33467778899999999999999998 679999999999999999
Q ss_pred CCEEEEecccccccCCCCCC-----------ccccCcccccccccc-----ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKPH-----------ASVESDCILHGYIKK-----LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~~-----------~~~~t~~~~~~~v~~-----~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+..++.|||.++...-.... .-.-|..|.+||+.. .-+.+.|+|+ ++|++|++..+.....
T Consensus 166 ~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~ 245 (302)
T KOG2345|consen 166 GLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY 245 (302)
T ss_pred CceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh
Confidence 99999999999855322110 112267788999842 2256788888 8899988877422111
Q ss_pred CCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHH
Q psy6542 226 SGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELL 304 (334)
Q Consensus 226 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL 304 (334)
....+-.+.+.. ++.... .....+..+.+ ++.|+.+.+|..|| +.+++
T Consensus 246 ~~GgSlaLAv~n-------------------------~q~s~P----~~~~yse~l~~--lik~mlqvdP~qRP~i~~ll 294 (302)
T KOG2345|consen 246 QQGGSLALAVQN-------------------------AQISIP----NSSRYSEALHQ--LIKSMLQVDPNQRPTIPELL 294 (302)
T ss_pred hcCCeEEEeeec-------------------------cccccC----CCCCccHHHHH--HHHHHhcCCcccCCCHHHHH
Confidence 111111111000 000011 11123334444 88999999999999 88888
Q ss_pred HHHHH
Q psy6542 305 GSMAR 309 (334)
Q Consensus 305 ~~l~~ 309 (334)
.++..
T Consensus 295 ~~~d~ 299 (302)
T KOG2345|consen 295 SKLDD 299 (302)
T ss_pred HHHHh
Confidence 77754
No 336
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92 E-value=3.1e-25 Score=207.46 Aligned_cols=183 Identities=20% Similarity=0.239 Sum_probs=137.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-----CeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-----NSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-----~~~~i 86 (334)
.++...||++.+..+|+.||||.++.... ......+.+|+.+++.++|+|| +++++++... ...|+
T Consensus 15 ~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni--------v~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 15 EGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENI--------IGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCc--------CchhheeecccccccceEEE
Confidence 35677999999999999999999975332 2234556789999999999999 9998876643 35899
Q ss_pred EEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 87 IGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 87 vmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
+|||+.+++..+.... .+ ....+..++.|++.||.|||+.+ |+||||||+||++++++.
T Consensus 86 v~e~~~~~l~~~~~~~--~l---~~~~~~~i~~ql~~aL~~LH~~~----------------ivH~dlkp~Nill~~~~~ 144 (336)
T cd07849 86 VQELMETDLYKLIKTQ--HL---SNDHIQYFLYQILRGLKYIHSAN----------------VLHRDLKPSNLLLNTNCD 144 (336)
T ss_pred EehhcccCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHEEECCCCC
Confidence 9999998754332221 23 34455667789999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCC-----CccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 167 VRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+||+|||++........ ....|+..|++||+.. .. +..+|+|+ ++|+++. +..||.+.
T Consensus 145 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~-G~~~f~~~ 213 (336)
T cd07849 145 LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLS-NRPLFPGK 213 (336)
T ss_pred EEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCC
Confidence 99999999986543321 2245688899999732 22 44566676 5666655 56677554
No 337
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92 E-value=9.4e-25 Score=195.42 Aligned_cols=185 Identities=14% Similarity=0.131 Sum_probs=141.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||++..+.+|..||+|.+..........+.+.+|+++++.++|+|+ +++++.+.+++.+|+|+||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i--------~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 10 EGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI--------VTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred CCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh--------hhhhheeccCCeEEEEEecC
Confidence 4677899999999999999999998754433344567789999999999999 99999999999999999999
Q ss_pred CCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC-EE
Q psy6542 92 SGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH-VR 168 (334)
Q Consensus 92 ~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~-vk 168 (334)
.|+ + +.+....... ........++.|++.||.|||+.+ ++|+||||+||++++++. +|
T Consensus 82 ~~~~L~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~~----------------i~H~dl~~~nil~~~~~~~~~ 142 (257)
T cd08225 82 DGGDLMKRINRQRGVL---FSEDQILSWFVQISLGLKHIHDRK----------------ILHRDIKSQNIFLSKNGMVAK 142 (257)
T ss_pred CCCcHHHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHHCC----------------cccccCCHHHEEEcCCCCeEE
Confidence 887 3 3332222111 245556777889999999999999 999999999999998864 69
Q ss_pred EEecccccccCCCCC--CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKP--HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 169 l~DFGla~~~~~~~~--~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|+|||++........ ....|++.|++||+.. .....+|+|+ ++++++ ++..||.+
T Consensus 143 l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~ 204 (257)
T cd08225 143 LGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC-TLKHPFEG 204 (257)
T ss_pred ecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCC
Confidence 999999987654432 2235788899999743 2345677777 555654 45556543
No 338
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=4.5e-24 Score=189.47 Aligned_cols=184 Identities=17% Similarity=0.165 Sum_probs=144.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+++.|++|++..... ...+.+.+|+++++.++|+|+ +++++.+..++..+++|||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 10 KGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNI--------VKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred cCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCE--------eEEEEEEecCCeEEEEEecC
Confidence 45678999999999999999999986554 244577889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+....... ........++.|++.||.|||+++ ++|+||+|+||++++++.++|+
T Consensus 80 ~~~~L~~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~----------------i~h~dl~p~ni~i~~~~~~~l~ 140 (253)
T cd05122 80 SGGSLKDLLKSTNQT---LTESQIAYVCKELLKGLEYLHSNG----------------IIHRDIKAANILLTSDGEVKLI 140 (253)
T ss_pred CCCcHHHHHhhcCCC---CCHHHHHHHHHHHHHHHHHhhcCC----------------EecCCCCHHHEEEccCCeEEEe
Confidence 977 54443332122 245556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC-CCccccCcccccccccccc--CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK-PHASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~-~~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++....... .....++..|++||..... ...+|+|+ ++|+++. +..||...
T Consensus 141 d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~ 200 (253)
T cd05122 141 DFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE-GKPPYSEL 200 (253)
T ss_pred eccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh-CCCCCCCC
Confidence 999998776654 3445678889999975322 34566666 5566554 55566443
No 339
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.92 E-value=1.4e-24 Score=194.56 Aligned_cols=182 Identities=12% Similarity=0.068 Sum_probs=136.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++.... +..+|+|.++..... ...+.+|+++++.++|||+ +++++++......|+||||+
T Consensus 14 ~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 14 SGQFGLVWLGYWLE-KRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKL--------VQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred CcccceEEEEEEeC-CCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCe--------eeEEEEEccCCceEEEEEcC
Confidence 35556899998754 778999998755442 2356779999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +..........+ ....++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 82 ~~~~L~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~----------------i~h~dl~p~ni~i~~~~~~~l~ 142 (256)
T cd05112 82 EHGCLSDYLRAQRGKF---SQETLLGMCLDVCEGMAYLESSN----------------VIHRDLAARNCLVGENQVVKVS 142 (256)
T ss_pred CCCcHHHHHHhCccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccccccceEEEcCCCeEEEC
Confidence 988 443333221122 44556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCc---cccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHA---SVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~~~---~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||+++......... ..++..|++||+.. .. ...+|+|+ ++|+++..+..||..
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 204 (256)
T cd05112 143 DFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYEN 204 (256)
T ss_pred CCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 999998664433221 22345788999743 22 33566666 677777667777644
No 340
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.92 E-value=2.7e-24 Score=192.33 Aligned_cols=181 Identities=15% Similarity=0.149 Sum_probs=141.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.+....||++....+++.||+|.++.... .+.+.+|+++++.++|+|+ +++++.+.++..+|++|||+
T Consensus 13 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i--------~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 13 EGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYI--------VKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred CCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcE--------eeeeeeeecCCcEEEEEecC
Confidence 45677999999999999999999875432 5678889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +..+.......+ .......++.|++.||.|||+.+ ++|+||+|+||++++++.++|+
T Consensus 81 ~~~~L~~~l~~~~~~l---~~~~~~~~~~~l~~~l~~lh~~~----------------i~H~dl~~~ni~~~~~~~~~l~ 141 (256)
T cd06612 81 GAGSVSDIMKITNKTL---TEEEIAAILYQTLKGLEYLHSNK----------------KIHRDIKAGNILLNEEGQAKLA 141 (256)
T ss_pred CCCcHHHHHHhCccCC---CHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCCcceEEECCCCcEEEc
Confidence 988 443333222222 44556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++....... .....++..|++||+.. .. ...+|+|+ ++|+++ ++..||..
T Consensus 142 dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~-~g~~p~~~ 201 (256)
T cd06612 142 DFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMA-EGKPPYSD 201 (256)
T ss_pred ccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHH-hCCCCCCC
Confidence 999998765443 23345678899999742 22 34566676 566655 45666644
No 341
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.92 E-value=8.7e-25 Score=205.37 Aligned_cols=184 Identities=19% Similarity=0.188 Sum_probs=139.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ 85 (334)
+++...||++.+..+|+.||||.+..........+.+.+|+++++.++|+|| +++++++... +.+|
T Consensus 27 ~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~~ 98 (345)
T cd07877 27 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV--------IGLLDVFTPARSLEEFNDVY 98 (345)
T ss_pred ecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcc--------cceeeeeeecccccccccEE
Confidence 4667799999999999999999998654433334567789999999999999 9999888643 3478
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
++++++.+.+..+.... .+ ....+..++.|++.||.|||+.+ |+||||||+||++++++
T Consensus 99 lv~~~~~~~L~~~~~~~--~l---~~~~~~~i~~qi~~aL~~LH~~~----------------ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 99 LVTHLMGADLNNIVKCQ--KL---TDDHVQFLIYQILRGLKYIHSAD----------------IIHRDLKPSNLAVNEDC 157 (345)
T ss_pred EEehhcccCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCChHHEEEcCCC
Confidence 99999877665443322 23 34445667789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCCccccCccccccccccc--c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHASVESDCILHGYIKKL--G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~--~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.+||+|||+++..... .....++..|++||+... . ...+|+|+ ++|+++ .+..||.+.+
T Consensus 158 ~~kl~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~-~g~~pf~~~~ 222 (345)
T cd07877 158 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTD 222 (345)
T ss_pred CEEEeccccccccccc-ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999999999865433 233456888999997432 2 34566666 555654 4566775543
No 342
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.92 E-value=2.9e-24 Score=194.32 Aligned_cols=183 Identities=17% Similarity=0.109 Sum_probs=138.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc--------chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH--------ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~--------~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~ 83 (334)
.++.++||+|.+..+|+.||||.++.... .....+.+..|+++++.++|+|+ +++++++..++.
T Consensus 11 ~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~ 82 (272)
T cd06629 11 KGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNI--------VQYLGFETTEEY 82 (272)
T ss_pred ccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCc--------ceEEEEeccCCc
Confidence 45677999999999999999999875322 11123467789999999999999 999999999999
Q ss_pred EEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 84 HYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 84 ~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
+++||||+.|+ +....... ..+ .......++.|++.||.|||+++ ++||||+|+||+++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~-~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dl~~~nil~~ 142 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY-GRF---EEQLVRFFTEQVLEGLAYLHSKG----------------ILHRDLKADNLLVD 142 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc-cCC---CHHHHHHHHHHHHHHHHHHhhCC----------------eeecCCChhhEEEc
Confidence 99999999988 44332322 222 33445566779999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCC----CCccccCccccccccccc----cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 163 EHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKKL----GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~~----~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
.++.++|+|||+++...... .....++..|++||+... ....+|.|+ ++|+++. +..||.
T Consensus 143 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~ 213 (272)
T cd06629 143 ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA-GRRPWS 213 (272)
T ss_pred CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh-CCCCCc
Confidence 99999999999998654321 223456788999997432 234556666 5666655 555653
No 343
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=9.6e-25 Score=196.97 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=139.0
Q ss_pred CCCceEEEeceeCCCC------CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSLKPLG------FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~------~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.++.+.||++..+.++ +.||||.+....... ....+.+|+++++.++|||| +++++++..++..|
T Consensus 5 ~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~ 75 (269)
T cd05044 5 SGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQ-EKKEFLKEAHLMSNFNHPNI--------VKLLGVCLLNEPQY 75 (269)
T ss_pred cccceeEEeeeecccccCcccceeehhhhhhcccchh-hHHHHHHHHHHHHhcCCCCe--------eeEeeeecCCCCeE
Confidence 4667789999887554 789999987543222 34467789999999999999 99999999999999
Q ss_pred EEEEccCCC-h-hHHhhhhhhh--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 86 IIGVRQSGP-K-DQISRSKINR--YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 86 ivmEy~~g~-l-~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
+||||++|+ + +++....... .........+.++.|++.||.|||+.+ ++|+||||+||++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~----------------i~H~dl~p~nil~ 139 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH----------------FIHRDLAARNCLV 139 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCChheEEE
Confidence 999999987 4 3443222111 111245566778889999999999999 9999999999999
Q ss_pred CCCC-----CEEEEecccccccCCCCC----CccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 162 DEHG-----HVRISDLGLACDFSKKKP----HASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 162 ~~~~-----~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++++ .++|+|||+++....... ....++..|++||+... ....+|+|+ ++|+++..+..||..
T Consensus 140 ~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 140 SEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred ecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence 9887 899999999986543321 12233567888997432 245667777 777777656667643
No 344
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=2.4e-24 Score=195.20 Aligned_cols=188 Identities=15% Similarity=0.093 Sum_probs=138.8
Q ss_pred CCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
+++.+.||+|..+. +.+.||+|.+..... ....+.+.+|++++++++|+|+ +++++++.+.+..|+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~l 85 (275)
T cd05046 15 RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNV--------VRLLGLCREAEPHYM 85 (275)
T ss_pred ccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcce--------eeeEEEECCCCcceE
Confidence 46778999999764 456799998875443 2245568889999999999999 999999999899999
Q ss_pred EEEccCCC-hhHHhhhhhhh-----hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 87 IGVRQSGP-KDQISRSKINR-----YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~-----~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
||||++++ +..+....... ...........++.|++.||.|||+.+ ++||||||+||+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~----------------i~H~dlkp~Nil 149 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR----------------FVHRDLAARNCL 149 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC----------------cccCcCccceEE
Confidence 99999987 54333322100 002355556677889999999999999 999999999999
Q ss_pred eCCCCCEEEEecccccccCCCC---CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 161 LDEHGHVRISDLGLACDFSKKK---PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++.++.++++|||++....... .....++..|++||... .. ...+|+|+ ++|+++..+..||..
T Consensus 150 i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~ 221 (275)
T cd05046 150 VSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG 221 (275)
T ss_pred EeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999987543322 12234466789999743 22 34566666 667776666667643
No 345
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92 E-value=1.5e-24 Score=202.49 Aligned_cols=186 Identities=18% Similarity=0.132 Sum_probs=141.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchH------------HhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESR------------VAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS 79 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~------------~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~ 79 (334)
.++.+.||+|.++.+++.||||.++....... ....+.+|+++++.++|+|| +++++++.
T Consensus 19 ~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~ 90 (335)
T PTZ00024 19 EGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI--------MGLVDVYV 90 (335)
T ss_pred CCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce--------eeeeEEEe
Confidence 47778999999999999999999976543210 11246689999999999999 99999999
Q ss_pred cCCeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 80 EPNSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 80 ~~~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
.++..|+||||+.|++....... .. ........++.|++.||.|||+.+ ++|+||||+||
T Consensus 91 ~~~~~~lv~e~~~~~l~~~l~~~-~~---~~~~~~~~~~~ql~~aL~~LH~~~----------------i~H~dl~~~ni 150 (335)
T PTZ00024 91 EGDFINLVMDIMASDLKKVVDRK-IR---LTESQVKCILLQILNGLNVLHKWY----------------FMHRDLSPANI 150 (335)
T ss_pred cCCcEEEEEeccccCHHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eecccccHHHe
Confidence 99999999999998854433322 12 244556677889999999999999 99999999999
Q ss_pred eeCCCCCEEEEecccccccCCC--------------C--CCccccCccccccccccc---cCCcceeeh---hHHHHHcC
Q psy6542 160 LLDEHGHVRISDLGLACDFSKK--------------K--PHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFP 217 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~--------------~--~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~ 217 (334)
+++.++.++|+|||++...... . .....++..|++||+... ....+|.|+ ++|+++.
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t- 229 (335)
T PTZ00024 151 FINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT- 229 (335)
T ss_pred EECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh-
Confidence 9999999999999999866511 1 112235678899997532 234566666 5566655
Q ss_pred CCCCCCCCC
Q psy6542 218 NRLELHPES 226 (334)
Q Consensus 218 ~~~~~~~~~ 226 (334)
+.+||.+..
T Consensus 230 g~~p~~~~~ 238 (335)
T PTZ00024 230 GKPLFPGEN 238 (335)
T ss_pred CCCCCCCCC
Confidence 777876655
No 346
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=2e-24 Score=193.97 Aligned_cols=183 Identities=17% Similarity=0.084 Sum_probs=138.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||+|.+.. ++.||||.+...... .+.+.+|+++++.++|+|+ +++++++.++...++||||+
T Consensus 16 ~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 16 AGQFGEVWMGTWNG-TTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKL--------VQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred cCcceEEEEEEEcC-CceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCE--------eeeeeeeecCCceEEEEecc
Confidence 46677999998764 578999999865442 2457789999999999999 99999999889999999999
Q ss_pred CCC-hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 92 SGP-KDQISRS-KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~-~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
.++ +...... ....+ .......++.|++.||.|||+++ ++|+||||+||++++++.++|
T Consensus 84 ~~~~L~~~i~~~~~~~~---~~~~~~~~~~~i~~al~~lh~~~----------------i~h~di~p~nili~~~~~~~l 144 (261)
T cd05034 84 SKGSLLDFLKSGEGKKL---RLPQLVDMAAQIAEGMAYLESRN----------------YIHRDLAARNILVGENLVCKI 144 (261)
T ss_pred CCCCHHHHHhccccCCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCcchheEEEcCCCCEEE
Confidence 887 4333222 21122 44556677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCCC---ccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPH---ASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 170 ~DFGla~~~~~~~~~---~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|||++..+...... ....+..|++||.... ....+|+|+ ++|++++.+..||.+.
T Consensus 145 ~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 208 (261)
T cd05034 145 ADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM 208 (261)
T ss_pred CccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999876543211 1223457888997532 244566677 6677777677787543
No 347
>KOG4278|consensus
Probab=99.92 E-value=2.7e-25 Score=211.32 Aligned_cols=222 Identities=14% Similarity=0.085 Sum_probs=169.8
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC--
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-- 94 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-- 94 (334)
.||.+.-++-.-.||||.++.+.. ....|..|+.+|+.++|||+ |+++++|...-.+|||+|||..|
T Consensus 282 eVYeGvWKkyslTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNL--------VqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 282 EVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNL--------VQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred ceeeeeeeccceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccH--------HHHhhhhccCCCeEEEEecccCccH
Confidence 455555555577899999997665 33467789999999999999 99999999999999999998777
Q ss_pred hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccc
Q psy6542 95 KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGL 174 (334)
Q Consensus 95 l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGl 174 (334)
+|++..+... +...-.++.++.||.+|+.||..++ +|||||...|+|+..+..||++||||
T Consensus 351 LdYLRecnr~---ev~avvLlyMAtQIsSaMeYLEkkn----------------FIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 351 LDYLRECNRS---EVPAVVLLYMATQISSAMEYLEKKN----------------FIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred HHHHHHhchh---hcchhHHHHHHHHHHHHHHHHHHhh----------------hhhhhhhhhhccccccceEEeeccch
Confidence 7888666532 2244556677889999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCcccc---Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccccccccccc
Q psy6542 175 ACDFSKKKPHASVE---SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDL 246 (334)
Q Consensus 175 a~~~~~~~~~~~~~---t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 246 (334)
++.+..+......| ..-+++||-+. ....++|+|. ++||....+..||.|.+..
T Consensus 412 sRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS------------------ 473 (1157)
T KOG4278|consen 412 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------ 473 (1157)
T ss_pred hhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH------------------
Confidence 99998887665555 45678888643 3356788888 8899988888776554311
Q ss_pred ccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch
Q psy6542 247 ITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC 299 (334)
Q Consensus 247 ~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~ 299 (334)
.+...+.+ ..|+..+ .++++.+.++|..||..++.++.+.
T Consensus 474 -------qVY~LLEk--gyRM~~P----eGCPpkVYeLMraCW~WsPsDRPsF 513 (1157)
T KOG4278|consen 474 -------QVYGLLEK--GYRMDGP----EGCPPKVYELMRACWNWSPSDRPSF 513 (1157)
T ss_pred -------HHHHHHhc--cccccCC----CCCCHHHHHHHHHHhcCCcccCccH
Confidence 11122222 1223333 6788999999999999887666555
No 348
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.92 E-value=9.1e-25 Score=203.87 Aligned_cols=184 Identities=20% Similarity=0.156 Sum_probs=139.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-CCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-PNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-~~~~~ivmEy 90 (334)
+++...||+|.++.+|+.||||.+.+........+.+..|+++++.++|||+ +++++++.. .+..|++|||
T Consensus 20 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni--------v~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 20 MGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENI--------ISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred ccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCe--------eeEeeeEecCCCcEEEEeeh
Confidence 4667799999999999999999987654433345667789999999999999 999999875 5678999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+.+++..+.... .+ .......++.|++.||.|||+.+ ++||||+|+||++++++.++|+
T Consensus 92 ~~~~L~~~~~~~--~~---~~~~~~~~~~ql~~aL~~LH~~~----------------iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 92 LGTDLHRLLTSR--PL---EKQFIQYFLYQILRGLKYVHSAG----------------VVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred hccCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHEeECCCCCEEeC
Confidence 987754443321 22 33344456779999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++...... .....++..|++||.... ....+|+|+ ++|+++ ++.+||.+..
T Consensus 151 dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~-tg~~~f~~~~ 210 (328)
T cd07856 151 DFGLARIQDPQ-MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML-EGKPLFPGKD 210 (328)
T ss_pred ccccccccCCC-cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH-hCCCCCCCCC
Confidence 99999865432 233456778999997432 244566666 455554 5666775543
No 349
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=5e-24 Score=190.05 Aligned_cols=184 Identities=17% Similarity=0.129 Sum_probs=144.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..+++.||+|.+............+.+|+++++.++|+|+ +++++++.+++.+|++|||+
T Consensus 10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 10 RGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI--------VKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCc--------cEEEEEEEeCCEEEEEEecC
Confidence 4677899999999999999999998776544455678899999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.... ........+.++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 82 ~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~~----------------i~H~dl~p~ni~i~~~~~~~l~ 141 (254)
T cd06627 82 ENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQG----------------VIHRDIKAANILTTKDGVVKLA 141 (254)
T ss_pred CCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhCC----------------cccCCCCHHHEEECCCCCEEEe
Confidence 987 43332222 22355556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCcccccccccccc-C-Ccceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKKLG-G-PFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~~-~-~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++........ ....++..|++||..... . ..+|+|+ ++|+++ .+..||..
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~-~g~~p~~~ 201 (254)
T cd06627 142 DFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL-TGNPPYYD 201 (254)
T ss_pred ccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH-hCCCCCCC
Confidence 9999987655443 334568889999974322 3 3455555 556655 45566543
No 350
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.92 E-value=6.7e-25 Score=205.97 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=140.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC------eEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN------SHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~------~~~ 85 (334)
.+....||++.+..+|..||||.+..........+.+.+|+++++.++|||| +++++++..+. .++
T Consensus 25 ~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07880 25 SGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV--------IGLLDVFTPDLSLDRFHDFY 96 (343)
T ss_pred ecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc--------cceeeeecCCccccccceEE
Confidence 4566789999999999999999997654444455677889999999999999 99999987553 469
Q ss_pred EEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 86 IIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 86 ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+||||+.+.+..+.... .+ ....+..++.|++.||.|||+.+ |+||||||+||++++++
T Consensus 97 lv~e~~~~~l~~~~~~~--~l---~~~~~~~i~~qi~~al~~LH~~g----------------i~H~dlkp~Nill~~~~ 155 (343)
T cd07880 97 LVMPFMGTDLGKLMKHE--KL---SEDRIQFLVYQMLKGLKYIHAAG----------------IIHRDLKPGNLAVNEDC 155 (343)
T ss_pred EEEecCCCCHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCC
Confidence 99999966654443321 22 44556677889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCCCccccCccccccccccc---cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHASVESDCILHGYIKKL---GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
.++|+|||++...... .....++..|++||+... .+..+|.|+ ++|++ ..+.+||.+..
T Consensus 156 ~~kl~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l-~~g~~pf~~~~ 220 (343)
T cd07880 156 ELKILDFGLARQTDSE-MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEM-LTGKPLFKGHD 220 (343)
T ss_pred CEEEeecccccccccC-ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHH-HhCCCCCCCCC
Confidence 9999999999865443 233456788999997432 234566666 45555 45666776544
No 351
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.92 E-value=7.8e-25 Score=204.43 Aligned_cols=186 Identities=20% Similarity=0.180 Sum_probs=138.5
Q ss_pred CCCceEEEeceeCCC--CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeec----CCeE
Q psy6542 12 RVSKWRVKPPSLKPL--GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSE----PNSH 84 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~--~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~----~~~~ 84 (334)
+++...||++.+..+ +..||||.+..........+.+.+|+++++.+ +|||| +++++.... ...+
T Consensus 10 ~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i--------v~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 10 QGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNI--------TCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCh--------heeeeeeeeccccCCcE
Confidence 466789999999988 99999999886444333456677899999999 59999 999886542 2468
Q ss_pred EEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 85 YIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
|++|||+++++....... ..+ ....+..++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 82 ~~~~e~~~~~L~~~l~~~-~~~---~~~~~~~~~~qi~~aL~~LH~~g----------------ivH~dlkp~Nili~~~ 141 (332)
T cd07857 82 YLYEELMEADLHQIIRSG-QPL---TDAHFQSFIYQILCGLKYIHSAN----------------VLHRDLKPGNLLVNAD 141 (332)
T ss_pred EEEEecccCCHHHHHhcC-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHHHeEEcCC
Confidence 999999998854443321 122 44555677789999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCC------CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKK------PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~------~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.+||+|||+++...... .....|+..|++||+.. .. ...+|+|+ ++|+++ ++.+||.+.+
T Consensus 142 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~-~g~~pf~~~~ 214 (332)
T cd07857 142 CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKD 214 (332)
T ss_pred CCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCcCCCCCC
Confidence 999999999998654322 12346788899999743 22 34556666 555554 5666776544
No 352
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.92 E-value=4.2e-24 Score=195.31 Aligned_cols=184 Identities=17% Similarity=0.213 Sum_probs=137.8
Q ss_pred CCCceEEEeceeC---CCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSLK---PLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~---~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.++...||+|.+. .+|..||+|+++.... .....+.+.+|+++++.+ +|+|| +.+++.+..++.+|
T Consensus 10 ~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i--------~~~~~~~~~~~~~~ 81 (290)
T cd05613 10 TGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL--------VTLHYAFQTDTKLH 81 (290)
T ss_pred cCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCCh--------hceeeEeecCCeEE
Confidence 3455678877764 5899999999986443 223445677899999999 58999 99999999999999
Q ss_pred EEEEccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 86 IIGVRQSGP-K-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 86 ivmEy~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+||||++|+ + +++... ..+ ....+..++.|++.||.|||+.+ ++||||||+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~--~~l---~~~~~~~~~~qi~~al~~lH~~~----------------i~H~dl~p~nil~~~ 140 (290)
T cd05613 82 LILDYINGGELFTHLSQR--ERF---KEQEVQIYSGEIVLALEHLHKLG----------------IIYRDIKLENILLDS 140 (290)
T ss_pred EEEecCCCCcHHHHHHHc--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHeEECC
Confidence 999999988 3 333222 122 34555666779999999999999 999999999999999
Q ss_pred CCCEEEEecccccccCCCC---CCccccCccccccccccc---c-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 164 HGHVRISDLGLACDFSKKK---PHASVESDCILHGYIKKL---G-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 164 ~~~vkl~DFGla~~~~~~~---~~~~~~t~~~~~~~v~~~---~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
++.+||+|||++....... .....|+..|++||.... . ....|+|+ ++|+++ .+..||...
T Consensus 141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll-~g~~p~~~~ 211 (290)
T cd05613 141 NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELL-TGASPFTVD 211 (290)
T ss_pred CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHh-cCCCCCCcC
Confidence 9999999999998664432 223457888999998532 2 34566666 556665 466676543
No 353
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92 E-value=2.5e-24 Score=198.39 Aligned_cols=186 Identities=14% Similarity=0.062 Sum_probs=136.8
Q ss_pred CCCCceEEEeceeCCCCCc----EEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFP----IQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYI 86 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~----vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~i 86 (334)
.+++...||++.+..+|.. ||+|.+...... .....+.+|+.+++.++|||| +++++++..+ ..++
T Consensus 16 g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~l~h~ni--------v~~~~~~~~~-~~~~ 85 (303)
T cd05110 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP-KANVEFMDEALIMASMDHPHL--------VRLLGVCLSP-TIQL 85 (303)
T ss_pred ccCCCccEEEEEEecCCCcceeeEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCc--------ccEEEEEcCC-Ccee
Confidence 3566779999999888874 688888754432 233457789999999999999 9999988754 4678
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
++||+.+| +.......... .....++.++.|++.||.|||+++ |+||||||+||++++++
T Consensus 86 v~e~~~~g~l~~~~~~~~~~---~~~~~~~~~~~qi~~~L~~LH~~~----------------ivH~dikp~Nill~~~~ 146 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDN---IGSQLLLNWCVQIAKGMMYLEERR----------------LVHRDLAARNVLVKSPN 146 (303)
T ss_pred eehhcCCCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHhhcC----------------eeccccccceeeecCCC
Confidence 99999887 43322221111 244556777889999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCCC----CccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKP----HASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
.+||+|||+++....... ....++..|++||+.. .....+|+|+ ++|+++..+..||.+.
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~ 215 (303)
T cd05110 147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 215 (303)
T ss_pred ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999986654322 1223356788888743 2244677777 6778777666676443
No 354
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92 E-value=4.8e-24 Score=192.53 Aligned_cols=187 Identities=19% Similarity=0.118 Sum_probs=138.6
Q ss_pred CCCceEEEeceeCC-CCCcEEEEEeeCCCc--------chHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecC
Q psy6542 12 RVSKWRVKPPSLKP-LGFPIQIGMLRHRPH--------ESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEP 81 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-~~~~vAIK~l~~~~~--------~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~ 81 (334)
.+....||++.++. +++.+|+|.+..... .......+.+|+.++.+ ++|+|+ +++++++.++
T Consensus 10 ~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i--------~~~~~~~~~~ 81 (269)
T cd08528 10 SGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNI--------VRYYKTFLEN 81 (269)
T ss_pred CCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCe--------eeEEeeEccC
Confidence 45677999999988 789999999875321 22233456678887765 899999 9999999999
Q ss_pred CeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 82 NSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 82 ~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
+.+|++|||++|+ +..+................+.++.|++.||.|||+ .+ ++|+||||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~----------------i~H~dl~~~ni 145 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR----------------IVHRDLTPNNI 145 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc----------------eeecCCCHHHE
Confidence 9999999999987 433322211111223455667788899999999996 67 99999999999
Q ss_pred eeCCCCCEEEEecccccccCCCC-CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCC
Q psy6542 160 LLDEHGHVRISDLGLACDFSKKK-PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~~-~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
++++++.++|+|||++....... .....++..|++||+... ..+.+|+|+ ++|+++. +.+||.
T Consensus 146 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~-g~~p~~ 214 (269)
T cd08528 146 MLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT-LQPPFY 214 (269)
T ss_pred EECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh-CCCccc
Confidence 99999999999999998665543 234457888999998532 245677777 5666655 466654
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.92 E-value=2.2e-24 Score=200.99 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=140.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+++...||+|.+..+|+.||||++..........+.+.+|+.+++.++|||| +++++++..++.+|+||||
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~ni--------v~~~~~~~~~~~~~~v~e~ 80 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNI--------MTSWTVFTTGSWLWVISPF 80 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc--------ceEeeeEecCCceEEEEec
Confidence 45677799999999999999999998765544455688899999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.++ +..+...... .......+..++.|++.||.|||+++ ++||||||+||++++++.+++
T Consensus 81 ~~~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~----------------ivHrDlkp~Nill~~~~~~~~ 142 (328)
T cd08226 81 MAYGSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQNG----------------YIHRNIKASHILISGDGLVSL 142 (328)
T ss_pred ccCCCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEeCCCcEEE
Confidence 9987 4333232111 11245555677889999999999999 999999999999999999999
Q ss_pred EecccccccCCCC---------CCccccCccccccccccc---c-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKK---------PHASVESDCILHGYIKKL---G-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~---------~~~~~~t~~~~~~~v~~~---~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||.+....... .....++..|++||+... + ...+|+|+ ++|++ +.+.+||....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el-~~g~~p~~~~~ 214 (328)
T cd08226 143 SGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACEL-ATGRVPFQDML 214 (328)
T ss_pred echHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHH-HhCCCCCCCcC
Confidence 9998654332211 111223456889998532 2 34566666 55555 45666775543
No 356
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=6.6e-24 Score=193.93 Aligned_cols=181 Identities=17% Similarity=0.187 Sum_probs=140.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..+++.||||.+...... ..+.+.+|+.+++.++|||+ +++++++..++..|+++||+
T Consensus 29 ~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~~~h~~v--------v~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 29 EGSTGIVCIATDKSTGRQVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHPNI--------VEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred cCCCeEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHHcCCCCh--------heEEEEEEcCCeEEEEEecc
Confidence 467789999999999999999998754332 23457789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +..+... ..+ .......++.|++.||.|||+++ ++||||+|+||+++.++.++|+
T Consensus 99 ~~~~L~~~~~~--~~~---~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~dl~p~Nil~~~~~~~~l~ 157 (285)
T cd06648 99 EGGALTDIVTH--TRM---NEEQIATVCLAVLKALSFLHAQG----------------VIHRDIKSDSILLTSDGRVKLS 157 (285)
T ss_pred CCCCHHHHHHh--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCChhhEEEcCCCcEEEc
Confidence 887 5443332 122 44455677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++........ ....|++.|++||+... . ...+|+|+ ++|+++. +..||..
T Consensus 158 d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~-g~~p~~~ 217 (285)
T cd06648 158 DFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD-GEPPYFN 217 (285)
T ss_pred ccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHh-CCCCCcC
Confidence 9999876544322 23457889999998532 2 34566666 6666655 5556644
No 357
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.92 E-value=2.9e-24 Score=195.25 Aligned_cols=189 Identities=9% Similarity=0.024 Sum_probs=139.6
Q ss_pred CCCceEEEeceeCC----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-CCeEEE
Q psy6542 12 RVSKWRVKPPSLKP----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-PNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-~~~~~i 86 (334)
+++.+.||+|.+.. ++..||+|.++.... ......+.+|+.+++.++|+|+ +++++++.. +...++
T Consensus 16 ~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni--------~~~~~~~~~~~~~~~~ 86 (280)
T cd05043 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS-EIQVTLLLQESCLLYGLSHQNI--------LPILHVCIEDGEPPFV 86 (280)
T ss_pred ccCCceEEEEEEecCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHHhCCCCCC--------CeEEEEEecCCCCCEE
Confidence 56777999999876 468899999875433 3334567889999999999999 999998765 577899
Q ss_pred EEEccCCC-hh-HHhhhhhhh---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 87 IGVRQSGP-KD-QISRSKINR---YHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 87 vmEy~~g~-l~-~l~~~~~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
++||+.++ +. ++....... .........+.++.|++.||.|||+.+ ++||||||+||++
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------i~H~di~p~nil~ 150 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG----------------VIHKDIAARNCVI 150 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC----------------EeecccCHhhEEE
Confidence 99999877 43 332221110 022355666778889999999999999 9999999999999
Q ss_pred CCCCCEEEEecccccccCCCCC----CccccCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 162 DEHGHVRISDLGLACDFSKKKP----HASVESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 162 ~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
++++.+||+|||+++.+..+.. ....++..|++||+.. . ....+|+|+ ++|+++..+.+||...
T Consensus 151 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 223 (280)
T cd05043 151 DEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI 223 (280)
T ss_pred cCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence 9999999999999986644321 1223456689999742 2 244667777 6677766577777543
No 358
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.92 E-value=3.1e-24 Score=190.84 Aligned_cols=170 Identities=14% Similarity=0.090 Sum_probs=130.1
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+...+||++.++.+|+.||+|.++.... ..+|...+....|||+ +++++++.+++.+|+||||+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i--------~~~~~~~~~~~~~~lv~e~~~ 68 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNM--------VCLHKYIVSEDSVFLVLQHAE 68 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCce--------eehhhheecCCeEEEEEecCC
Confidence 6678999999999999999999986432 2235555566779999 999999999999999999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
|+ +....... .. .....+..++.|++.||.|||+++ ++||||||+||+++.++.++++|
T Consensus 69 ~~~L~~~l~~~-~~---l~~~~~~~~~~ql~~~l~~lH~~~----------------i~H~dlkp~Nil~~~~~~~~l~d 128 (237)
T cd05576 69 GGKLWSHISKF-LN---IPEECVKRWAAEMVVALDALHREG----------------IVCRDLNPNNILLDDRGHIQLTY 128 (237)
T ss_pred CCCHHHHHHHh-cC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHEEEcCCCCEEEec
Confidence 88 43332222 12 245556777889999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCC
Q psy6542 172 LGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPN 218 (334)
Q Consensus 172 FGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~ 218 (334)
||++....... ....++..|++||... .. +..+|.|+ ++|+++.+.
T Consensus 129 f~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~ 179 (237)
T cd05576 129 FSRWSEVEDSC-DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGK 179 (237)
T ss_pred ccchhcccccc-ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCc
Confidence 99987665432 2334566789999743 22 34566666 667766644
No 359
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=6e-24 Score=195.05 Aligned_cols=184 Identities=15% Similarity=0.144 Sum_probs=137.8
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.++.+.||+|.+..+++.||||.++...... ..+.+..|+.++.+.. |+|| +++++++.++..+|++|||
T Consensus 25 ~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~v~e~ 95 (296)
T cd06618 25 SGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYI--------VKCYGYFITDSDVFICMEL 95 (296)
T ss_pred ccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCch--------HhhheeeecCCeEEEEeec
Confidence 4677899999999999999999998654432 2334555777666664 9999 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.+.+..+.......+ .......++.|++.||.|||+ .+ |+||||+|+||++++++.+||
T Consensus 96 ~~~~l~~l~~~~~~~l---~~~~~~~i~~~i~~~l~~lH~~~~----------------i~H~dl~p~nill~~~~~~kL 156 (296)
T cd06618 96 MSTCLDKLLKRIQGPI---PEDILGKMTVAIVKALHYLKEKHG----------------VIHRDVKPSNILLDASGNVKL 156 (296)
T ss_pred cCcCHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHhhCC----------------EecCCCcHHHEEEcCCCCEEE
Confidence 9887555544322222 444556778899999999997 57 999999999999999999999
Q ss_pred EecccccccCCCCC-CccccCccccccccccc------cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKKL------GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~~------~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+|||++..+..... ....++..|++||.... ....+|+|+ ++|+++. +..||..
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~ 220 (296)
T cd06618 157 CDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT-GQFPYKN 220 (296)
T ss_pred CccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh-CCCCCCc
Confidence 99999986654432 22346778899997432 234566666 5666655 6667643
No 360
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.92 E-value=7e-24 Score=191.20 Aligned_cols=184 Identities=19% Similarity=0.210 Sum_probs=137.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~i 86 (334)
.++...||+|.+..+|+.||+|.+..... .......+.+|++++++++|+|| +++++.+.+. +.+++
T Consensus 12 ~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 12 RGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI--------VQYYGCLRDPEEKKLSI 83 (264)
T ss_pred cCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCc--------ceEEEEEEcCCCCEEEE
Confidence 46677999999999999999999864322 23344578889999999999999 9999988754 56899
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG 165 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~ 165 (334)
+|||+.|+ +....... ..+ .......++.|++.||.|||+.+ ++|+||||+||+++.++
T Consensus 84 v~e~~~~~~L~~~~~~~-~~l---~~~~~~~~~~~i~~al~~LH~~~----------------i~H~dl~p~ni~i~~~~ 143 (264)
T cd06653 84 FVEYMPGGSIKDQLKAY-GAL---TENVTRRYTRQILQGVSYLHSNM----------------IVHRDIKGANILRDSAG 143 (264)
T ss_pred EEEeCCCCcHHHHHHHc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EecCCCCHHHEEEcCCC
Confidence 99999887 43332221 122 34455677789999999999999 99999999999999999
Q ss_pred CEEEEecccccccCCCC-----CCccccCccccccccccc-c-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKK-----PHASVESDCILHGYIKKL-G-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~-----~~~~~~t~~~~~~~v~~~-~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.++|+|||+++...... .....++..|++||+... . ...+|.|+ ++|+++ .+..||..
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~ 211 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML-TEKPPWAE 211 (264)
T ss_pred CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH-hCCCCCCc
Confidence 99999999998653321 123457788999997432 2 34455565 555555 46667643
No 361
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=1.1e-23 Score=191.38 Aligned_cols=251 Identities=16% Similarity=0.068 Sum_probs=161.9
Q ss_pred CCCceEEEeceeC----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeec--CCeEE
Q psy6542 12 RVSKWRVKPPSLK----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE--PNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~--~~~~~ 85 (334)
+++...||++... .+++.||||.++..... ...+.+.+|+++++.++|+|| +++++++.. +...+
T Consensus 14 ~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i--------~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 14 EGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENI--------VKYKGVCEKPGGRSLR 84 (284)
T ss_pred cCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCCh--------heEEeeeecCCCCceE
Confidence 4667799999854 45899999999865543 345678899999999999999 999998876 56799
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
++|||++++ ++.+...... .......+.++.|++.||.|||+.+ ++||||||+||+++.+
T Consensus 85 lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~~----------------i~H~dl~p~nil~~~~ 145 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQR----------------YIHRDLAARNILVESE 145 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHhEEEcCC
Confidence 999999887 4333232211 2345556677889999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCCC-----ccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCCCCCcccch
Q psy6542 165 GHVRISDLGLACDFSKKKPH-----ASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELI 234 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~~-----~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i 234 (334)
+.++|+|||++......... ...++..|++|+... .. ...+|+|+ ++|+++ .+..|+....... .. +
T Consensus 146 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~-tg~~p~~~~~~~~-~~-~ 222 (284)
T cd05038 146 DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF-TYGDPSQSPPAEF-LR-M 222 (284)
T ss_pred CCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee-ccCCCcccccchh-cc-c
Confidence 99999999999876533211 122344577788632 23 33556666 455554 4445543322110 00 0
Q ss_pred hcccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch-hHHHHHHHHH
Q psy6542 235 FMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC-SQELLGSMAR 309 (334)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~-~~~lL~~l~~ 309 (334)
... ..+.. ....+...+..+. +.. .....+..+.. +..+|...+|..|+ +.++++.+.+
T Consensus 223 ~~~-----~~~~~---~~~~~~~~~~~~~--~~~----~~~~~~~~~~~--li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 223 IGI-----AQGQM---IVTRLLELLKEGE--RLP----RPPSCPDEVYD--LMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred ccc-----ccccc---cHHHHHHHHHcCC--cCC----CCccCCHHHHH--HHHHHhccChhhCCCHHHHHHHHhh
Confidence 000 00100 0111222221111 111 11223334444 77888888999999 8888877754
No 362
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92 E-value=3.8e-24 Score=196.38 Aligned_cols=182 Identities=18% Similarity=0.204 Sum_probs=141.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++...||++..+.+|+.||||.+..... .....+.+|+.+++.++|+|+ +++++.+..++..|+||||+
T Consensus 30 ~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i--------v~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 30 EGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENV--------VEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred CCCCeEEEEEEEcCCCeEEEEEEecccch--hHHHHHHHHHHHHHhcCCcch--------hheeeEEEeCCEEEEEEecC
Confidence 46668999999999999999999864332 234567889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++ +..+.... .+ .......++.|++.||.|||+.+ ++|+||||+||+++.++.++|+
T Consensus 100 ~~~~L~~~~~~~--~~---~~~~~~~~~~ql~~~l~~lH~~g----------------ivH~dl~p~Nilv~~~~~~~l~ 158 (292)
T cd06657 100 EGGALTDIVTHT--RM---NEEQIAAVCLAVLKALSVLHAQG----------------VIHRDIKSDSILLTHDGRVKLS 158 (292)
T ss_pred CCCcHHHHHhcC--CC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHEEECCCCCEEEc
Confidence 998 54443221 22 34455677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++....... .....++..|++||... ..+..+|.|+ ++|++ ..+.+||.+.
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el-~tg~~p~~~~ 219 (292)
T cd06657 159 DFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM-VDGEPPYFNE 219 (292)
T ss_pred ccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHH-HhCCCCCCCC
Confidence 999987654432 22345778899999743 2244567777 55555 4566676543
No 363
>KOG0984|consensus
Probab=99.92 E-value=3.7e-25 Score=185.62 Aligned_cols=186 Identities=16% Similarity=0.156 Sum_probs=145.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
|+.-+.|-+.++..+|+..|+|.++..-... ..+++..|+.+... ...|.+ |.||+.+.....+||.||.
T Consensus 56 rGayG~vekmrh~~sg~imAvKri~~tvn~q-~q~r~L~dldi~~r~~~CPf~--------V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 56 RGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ-EQKRLLMDLDIIMRTVDCPFT--------VHFYGALFREGDVWICMEL 126 (282)
T ss_pred CCccchhhheeeccCCeEEEEeeehhhcChH-HHHHHHHhhhhhccCCCCCeE--------EEeehhhhccccEEEeHHH
Confidence 4555688888999999999999999765533 44566678887544 467777 9999999999999999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
|+.++|.+...-...-.-.++..+-.|+..+..||.|||++-+ +||||+||+|||+|.+|+||+|
T Consensus 127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~---------------vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS---------------VIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh---------------hhhccCCcceEEEccCCcEEEc
Confidence 9999877766655444444666677889999999999999863 9999999999999999999999
Q ss_pred ecccccccCCCCCCc-cccCcccccccc-----ccccCC-cceeeh---hHHHHHcCCCCCC
Q psy6542 171 DLGLACDFSKKKPHA-SVESDCILHGYI-----KKLGGP-FVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 171 DFGla~~~~~~~~~~-~~~t~~~~~~~v-----~~~~~~-~~~~w~---~~~~~l~~~~~~~ 222 (334)
|||++-.+.++...+ ..|...||+||. ...+|. ++|+|| +++|+ +..+.|+
T Consensus 192 DFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiEl-A~lr~PY 252 (282)
T KOG0984|consen 192 DFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEM-AILRFPY 252 (282)
T ss_pred ccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhh-hhccccc
Confidence 999998877776555 567778999986 233444 777788 44454 5556564
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92 E-value=4.9e-25 Score=206.84 Aligned_cols=185 Identities=19% Similarity=0.177 Sum_probs=141.1
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCe------E
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNS------H 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~------~ 84 (334)
..++.+.||+|.+..+++.||||.+..........+.+.+|+.+++.++|+|+ +++++++..++. +
T Consensus 24 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--------v~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07851 24 GSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV--------IGLLDVFTPASSLEDFQDV 95 (343)
T ss_pred ccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCH--------HHHHHHhhccccccccccE
Confidence 35677899999999999999999987654433344567789999999999999 888887765544 8
Q ss_pred EEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 85 YIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
|+||||+.+.+..+... ..+ ....+..++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 96 ~lv~e~~~~~L~~~~~~--~~l---~~~~~~~~~~ql~~aL~~LH~~g----------------i~H~dlkp~Nill~~~ 154 (343)
T cd07851 96 YLVTHLMGADLNNIVKC--QKL---SDDHIQFLVYQILRGLKYIHSAG----------------IIHRDLKPSNIAVNED 154 (343)
T ss_pred EEEEecCCCCHHHHHhc--CCC---CHHHHHHHHHHHHHHHHHHHHCC----------------eecCCCCHHHeEECCC
Confidence 99999997775443332 123 44455677789999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCCCccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKPHASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+.++|+|||++...... .....++..|++||+.. ..+..+|+|+ ++|+++ ++..||.+..
T Consensus 155 ~~~kL~dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell-tg~~pf~~~~ 220 (343)
T cd07851 155 CELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGKTLFPGSD 220 (343)
T ss_pred CCEEEcccccccccccc-ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCC
Confidence 99999999999876543 33345678899999743 2244566676 555554 4566775543
No 365
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92 E-value=1.4e-23 Score=191.50 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=140.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..++..||+|++..... ..+.+.+|+++++.++|+|+ +++++.+..++..|++|||+
T Consensus 29 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 29 EGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNI--------VDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred CCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCe--------eEEEEEEEECCEEEEEEecc
Confidence 45678999999999999999999986543 34567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+...... .......+.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+
T Consensus 98 ~~~~L~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~lH~~g----------------i~H~dl~p~ni~i~~~~~~~l~ 158 (286)
T cd06614 98 DGGSLTDIITQNFV---RMNEPQIAYVCREVLQGLEYLHSQN----------------VIHRDIKSDNILLSKDGSVKLA 158 (286)
T ss_pred CCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhCC----------------eeeCCCChhhEEEcCCCCEEEC
Confidence 977 5444333211 2244556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC--CCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK--PHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~--~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++....... .....++..|++||+.. .....+|+|+ ++|+++ ++..||..
T Consensus 159 d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~-~g~~p~~~ 218 (286)
T cd06614 159 DFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA-EGEPPYLR 218 (286)
T ss_pred ccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH-hCCCCCCC
Confidence 999987654432 12334677899999742 2245667777 555554 55656543
No 366
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=9.4e-25 Score=198.09 Aligned_cols=187 Identities=18% Similarity=0.161 Sum_probs=144.9
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++....||+|.+..+++.||+|.+..........+.+..|+++++.++|+|+ +++++++.+.+.+++||||+
T Consensus 9 ~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 9 EGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI--------VKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred ccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCH--------HHHHhhhhcCCceEEEecCc
Confidence 4567899999999999999999998765444445667789999999999999 99999999999999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
++++..+...... .........++.|++.||.|||+.+ ++||||+|+||++++++.++|+|
T Consensus 81 ~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~----------------i~H~~l~~~ni~~~~~~~~~l~d 141 (282)
T cd07829 81 DMDLKKYLDKRPG---PLSPNLIKSIMYQLLRGLAYCHSHR----------------ILHRDLKPQNILINRDGVLKLAD 141 (282)
T ss_pred CcCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCChheEEEcCCCCEEEec
Confidence 9885443333211 2345566677789999999999999 99999999999999999999999
Q ss_pred cccccccCCCCC--CccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 172 LGLACDFSKKKP--HASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~~~~~~--~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
||+++....... ....++..|++||+.. .....+|+|+ ++|+++. +.+||.+..
T Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~-~~~~~~~~~ 203 (282)
T cd07829 142 FGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT-GKPLFPGDS 203 (282)
T ss_pred CCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh-CCCCCCCcc
Confidence 999987654432 2233467789999742 2344566666 5556555 466775544
No 367
>KOG0603|consensus
Probab=99.91 E-value=2.7e-24 Score=205.96 Aligned_cols=217 Identities=17% Similarity=0.137 Sum_probs=159.7
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+|.--|..+.+..+++..|+|++.+... ...+|+.++.. -+|||| +++++++.++...|+|||++
T Consensus 333 gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~ni--------v~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 333 GSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNI--------VKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred CCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcc--------eeecceecCCceeeeeehhc
Confidence 3445677899999999999999997632 22346655555 479999 99999999999999999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee-CCCCCEE
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL-DEHGHVR 168 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl-~~~~~vk 168 (334)
.|+ ++.+.... . .......|+.||+.|+.|||+++ ++||||||+|||+ ++.++++
T Consensus 399 ~g~ell~ri~~~~--~----~~~e~~~w~~~lv~Av~~LH~~g----------------vvhRDLkp~NIL~~~~~g~lr 456 (612)
T KOG0603|consen 399 DGGELLRRIRSKP--E----FCSEASQWAAELVSAVDYLHEQG----------------VVHRDLKPGNILLDGSAGHLR 456 (612)
T ss_pred cccHHHHHHHhcc--h----hHHHHHHHHHHHHHHHHHHHhcC----------------eeecCCChhheeecCCCCcEE
Confidence 999 44443322 1 22445578889999999999999 9999999999999 6899999
Q ss_pred EEecccccccCCCCCCccccCccccccccc-cccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccc
Q psy6542 169 ISDLGLACDFSKKKPHASVESDCILHGYIK-KLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVS 243 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~~t~~~~~~~v~-~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 243 (334)
|+|||.++..... ..+.+=|..|.+||+. ..+|+.+.||| ++|+||+ |.+||...... .++........+.
T Consensus 457 ltyFG~a~~~~~~-~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~-G~tp~~~~P~~--~ei~~~i~~~~~s 532 (612)
T KOG0603|consen 457 LTYFGFWSELERS-CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT-GRTLFAAHPAG--IEIHTRIQMPKFS 532 (612)
T ss_pred EEEechhhhCchh-hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh-CCCccccCCch--HHHHHhhcCCccc
Confidence 9999999987776 3333456778899984 56799999999 5566655 55577666544 1222111221111
Q ss_pred cccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 244 QDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.......++.+...+..||..|++..
T Consensus 533 -~~vS~~AKdLl~~LL~~dP~~Rl~~~ 558 (612)
T KOG0603|consen 533 -ECVSDEAKDLLQQLLQVDPALRLGAD 558 (612)
T ss_pred -cccCHHHHHHHHHhccCChhhCcChh
Confidence 22223567788888888999999865
No 368
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.91 E-value=1.1e-23 Score=190.77 Aligned_cols=177 Identities=14% Similarity=0.120 Sum_probs=132.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHh-cCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNH-LRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~-l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
..++...||++.++.+|..+|+|.+....... .|+.+... .+|||+ +++++.+..++.+|+|||
T Consensus 25 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~i--------v~~~~~~~~~~~~~iv~e 89 (267)
T PHA03390 25 IDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNF--------IKLYYSVTTLKGHVLIMD 89 (267)
T ss_pred cCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCE--------EEEEEEEecCCeeEEEEE
Confidence 45677899999999999999999988543211 13333332 279999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HV 167 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~v 167 (334)
|++|+ +..+.... ..+ ....+..++.|++.||.|||+.+ ++||||||+||+++.++ .+
T Consensus 90 ~~~~~~L~~~l~~~-~~l---~~~~~~~~~~qi~~~l~~lH~~~----------------i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 90 YIKDGDLFDLLKKE-GKL---SEAEVKKIIRQLVEALNDLHKHN----------------IIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred cCCCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------eeeCCCCHHHEEEeCCCCeE
Confidence 99887 44333322 122 45556677889999999999999 99999999999999998 99
Q ss_pred EEEecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|+|||+++...... ...++..|++||+.. .. .+.+|+|+ ++|+++. +..||...
T Consensus 150 ~l~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~-g~~p~~~~ 209 (267)
T PHA03390 150 YLCDYGLCKIIGTPS--CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT-GKHPFKED 209 (267)
T ss_pred EEecCccceecCCCc--cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHH-CCCCCCCC
Confidence 999999998665432 345788899999853 23 34556666 5566554 56677543
No 369
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.91 E-value=6.2e-24 Score=189.32 Aligned_cols=186 Identities=19% Similarity=0.214 Sum_probs=143.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+.||++.+..+++.||+|.++.... .......+..|+++++.++|+|+ +++++.+..++.+|+||||
T Consensus 3 ~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 3 KGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFI--------VKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcH--------HHHHHHeecCCeeEEEEec
Confidence 46778999999999999999999987654 22234467789999999999999 9999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.++ +....... .. ........++.|++.||.|||+.+ ++|+||+|+||++++++.++|
T Consensus 75 ~~~~~L~~~l~~~-~~---l~~~~~~~~~~qi~~~l~~lh~~~----------------~~H~~l~p~ni~~~~~~~~~l 134 (250)
T cd05123 75 APGGELFSHLSKE-GR---FSEERARFYAAEIVLALEYLHSLG----------------IIYRDLKPENILLDADGHIKL 134 (250)
T ss_pred CCCCcHHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHHCC----------------ceecCCCcceEEEcCCCcEEE
Confidence 9766 43222221 12 245556677789999999999999 999999999999999999999
Q ss_pred EecccccccCCC--CCCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKK--KPHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~--~~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++...... ......++..|++||.... ....+|.|+ ++|+++. +..||...+
T Consensus 135 ~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~ 197 (250)
T cd05123 135 TDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT-GKPPFYAED 197 (250)
T ss_pred eecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCCC
Confidence 999999876553 2344566788999997432 244566666 5566655 666765443
No 370
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91 E-value=1.6e-23 Score=192.26 Aligned_cols=183 Identities=14% Similarity=0.158 Sum_probs=140.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++.+..++..||+|.+...... ..+.+.+|+.+++.++|||+ +++++++..++..|+||||+
T Consensus 29 ~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i--------~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 29 QGASGTVYTAIDVATGQEVAIKQMNLQQQP--KKELIINEILVMRENKHPNI--------VNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEeccccch--HHHHHHHHHHHHhhcCCCCe--------eehhheeeeCCcEEEEEecC
Confidence 466789999999999999999998644332 23567789999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.... .+ ....+..++.|++.||.|||+++ ++||||||+||+++.++.++|+
T Consensus 99 ~~~~L~~~~~~~--~l---~~~~~~~i~~~l~~al~~LH~~g----------------i~H~dL~p~Nili~~~~~~kL~ 157 (293)
T cd06647 99 AGGSLTDVVTET--CM---DEGQIAAVCRECLQALEFLHSNQ----------------VIHRDIKSDNILLGMDGSVKLT 157 (293)
T ss_pred CCCcHHHHHhhc--CC---CHHHHHHHHHHHHHHHHHHHhCC----------------EeeccCCHHHEEEcCCCCEEEc
Confidence 988 43332221 12 33445567789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCC--CccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKP--HASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 171 DFGla~~~~~~~~--~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
|||++........ ....++..|++||+.. .. ...+|+|+ ++|+++ .+..||...+
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll-~g~~pf~~~~ 219 (293)
T cd06647 158 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV-EGEPPYLNEN 219 (293)
T ss_pred cCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCC
Confidence 9999876554432 2345778899999743 22 34566666 555555 5666775544
No 371
>KOG0587|consensus
Probab=99.91 E-value=9.5e-24 Score=207.74 Aligned_cols=183 Identities=14% Similarity=0.148 Sum_probs=143.2
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEee-----cCCeE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTS-----EPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~-----~~~~~ 84 (334)
..|.-.+||+++++.+|+.+|||++......+ .....|.+|++.+ .|||+ +.+|++|. .++.+
T Consensus 28 g~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv--------~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 28 GNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNV--------ATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred eeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCc--------ceEEEEEEEecCCCCCeE
Confidence 34555699999999999999999998876622 2334588888876 58999 99999987 35789
Q ss_pred EEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 85 YIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 85 ~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
|+|||||.|| .|.++.-...+. .+..++-|+.+++.||.+||.+. ++|||+|-.|||++
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl---~E~~IaYI~re~lrgl~HLH~nk----------------viHRDikG~NiLLT 157 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRL---KEEWIAYILREILRGLAHLHNNK----------------VIHRDIKGQNVLLT 157 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccch---hhHHHHHHHHHHHHHHHHHhhcc----------------eeeecccCceEEEe
Confidence 9999999999 666655443333 45556677889999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCC--CCccccCccccccccc------cccCC-cceeeh---hHHHHHcCCCCCCCC
Q psy6542 163 EHGHVRISDLGLACDFSKKK--PHASVESDCILHGYIK------KLGGP-FVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~------~~~~~-~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
.++.|||+|||.+..+..+. ..++.|||++|+|||. ...|. ..|.|+ +..|+ ..+.+|+..
T Consensus 158 ~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEl-adG~PPl~D 230 (953)
T KOG0587|consen 158 ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEM-AEGAPPLCD 230 (953)
T ss_pred ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehh-cCCCCCccC
Confidence 99999999999999887765 5678899999999982 22233 566677 44444 556666543
No 372
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.91 E-value=1.3e-23 Score=188.31 Aligned_cols=180 Identities=17% Similarity=0.075 Sum_probs=133.3
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++. .+++.||+|.++... ....+.+|+.+++.++|||+ +++++++..+ ..|++|||+
T Consensus 16 ~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i--------~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 16 EGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNL--------VRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred cCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCc--------CeEEEEEcCC-CcEEEEECC
Confidence 45666888875 578899999987533 23467789999999999999 9999998755 479999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.|+ +..+...... ........+.++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 81 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~----------------~~H~dl~p~nili~~~~~~kl~ 142 (254)
T cd05083 81 SKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESKK----------------LVHRDLAARNILVSEDGVAKVS 142 (254)
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccccCcceEEEcCCCcEEEC
Confidence 987 4433332211 11244556677889999999999999 9999999999999999999999
Q ss_pred ecccccccCCCCCCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
|||++........ ....+..|++||... .. ....|+|+ ++|+++..+.+||...
T Consensus 143 Dfg~~~~~~~~~~-~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 143 DFGLARVGSMGVD-NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred CCccceeccccCC-CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 9999976543322 223356788898743 22 34566666 6777777677777543
No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91 E-value=1.6e-24 Score=203.27 Aligned_cols=184 Identities=17% Similarity=0.151 Sum_probs=135.4
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC----------
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP---------- 81 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~---------- 81 (334)
.++.+.||+|.++.+|+.||||.+...... ..+.+.+|+++++.++|||+ +++++++...
T Consensus 15 ~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~--~~~~~~~Ei~~l~~l~h~~i--------~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 15 CGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ--SVKHALREIKIIRRLDHDNI--------VKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred CCCCEEEEEEEECCCCcEEEEEEEecCCCc--hHHHHHHHHHHHHhcCCCcc--------hhhHhhhccccccccccccc
Confidence 467789999999999999999998765432 33567789999999999999 8888766543
Q ss_pred ----CeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCC
Q psy6542 82 ----NSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPA 157 (334)
Q Consensus 82 ----~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~ 157 (334)
..+|+||||+++++...... ..+ ....+..++.||+.||.|||+.+ ++||||||+
T Consensus 85 ~~~~~~~~lv~e~~~~~L~~~~~~--~~l---~~~~~~~~~~qi~~aL~~LH~~g----------------ivH~dikp~ 143 (342)
T cd07854 85 LTELNSVYIVQEYMETDLANVLEQ--GPL---SEEHARLFMYQLLRGLKYIHSAN----------------VLHRDLKPA 143 (342)
T ss_pred ccccceEEEEeecccccHHHHHHc--CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------cccCCCCHH
Confidence 46899999999874333221 122 34455667789999999999999 999999999
Q ss_pred ceeeCCC-CCEEEEecccccccCCCCC-----CccccCcccccccccc--c-cCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 158 NILLDEH-GHVRISDLGLACDFSKKKP-----HASVESDCILHGYIKK--L-GGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 158 NiLl~~~-~~vkl~DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~--~-~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||+++.+ +.+||+|||+++....... ....++..|++||+.. . ....+|+|+ ++++.++.+..||.+..
T Consensus 144 Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~ 223 (342)
T cd07854 144 NVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH 223 (342)
T ss_pred HEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999854 5689999999986543321 1234677899999642 2 234677777 44444455666776554
No 374
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.91 E-value=2.4e-23 Score=185.49 Aligned_cols=186 Identities=18% Similarity=0.134 Sum_probs=147.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivm 88 (334)
.+++.+.||+|.+..+++.|++|++..........+.+.+|++++++++|+|| +++++.+.+. +.++++|
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--------~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 9 GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI--------VRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCE--------eeEEEEEecCCCCeEEEEE
Confidence 46788999999999999999999998766544456678889999999999999 9999999988 8999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||++|+ +..+..... .+ .....+.++.|++.||.|||+.+ ++|+||+|+||+++.++.+
T Consensus 81 e~~~~~~L~~~~~~~~-~~---~~~~~~~~~~~l~~~l~~lh~~~----------------~~h~dl~p~ni~i~~~~~~ 140 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KL---PEPVIRKYTRQILEGLAYLHSNG----------------IVHRDIKGANILVDSDGVV 140 (260)
T ss_pred EecCCCcHHHHHHHcC-CC---CHHHHHHHHHHHHHHHHHHHHCC----------------ccccCCCHHHEEEcCCCCE
Confidence 999777 443333221 22 44556677889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCC----CCccccCccccccccccc--cCCcceeeh---hHHHHHcCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK----PHASVESDCILHGYIKKL--GGPFVSAWQ---TRYAKLFPNRLELHPE 225 (334)
Q Consensus 168 kl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~~--~~~~~~~w~---~~~~~l~~~~~~~~~~ 225 (334)
+|+|||.+....... .....++..|++||.... ....+|+|+ ++|+++. +..||...
T Consensus 141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~ 206 (260)
T cd06606 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT-GKPPWSEL 206 (260)
T ss_pred EEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Confidence 999999998776654 344567888999997533 344677777 5566655 55566443
No 375
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91 E-value=4.7e-24 Score=193.12 Aligned_cols=187 Identities=21% Similarity=0.234 Sum_probs=143.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
..++.+.||++....+|+.||||++..... .....+.+.+|.++++.++ |+|| +++++++..++.+++||
T Consensus 10 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i--------~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 10 GEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI--------IKLYYTFQDEENLYFVL 81 (280)
T ss_pred cCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCc--------hhHHHHhcCCceEEEEE
Confidence 456788999999999999999999986443 2233456778999999999 9999 99999999999999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||+.|+ +..+.... . .......+.++.|++.||.|||+.+ ++|+||+|+||+++.++.+
T Consensus 82 e~~~~~~L~~~l~~~-~---~l~~~~~~~i~~ql~~~l~~Lh~~~----------------~~H~dl~~~ni~i~~~~~~ 141 (280)
T cd05581 82 EYAPNGELLQYIRKY-G---SLDEKCTRFYAAEILLALEYLHSKG----------------IIHRDLKPENILLDKDMHI 141 (280)
T ss_pred cCCCCCcHHHHHHHc-C---CCCHHHHHHHHHHHHHHHHHHHHCC----------------eeecCCCHHHeEECCCCCE
Confidence 999777 53333322 1 2355566777889999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCC----------------------CccccCcccccccccccc--CCcceeeh---hHHHHHcCCCC
Q psy6542 168 RISDLGLACDFSKKKP----------------------HASVESDCILHGYIKKLG--GPFVSAWQ---TRYAKLFPNRL 220 (334)
Q Consensus 168 kl~DFGla~~~~~~~~----------------------~~~~~t~~~~~~~v~~~~--~~~~~~w~---~~~~~l~~~~~ 220 (334)
+|+|||++........ ....++..|++||+.... ...+|+|+ ++++++ .+..
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~-~g~~ 220 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML-TGKP 220 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH-hCCC
Confidence 9999999986644321 223456788899974322 34577777 455554 4666
Q ss_pred CCCCCC
Q psy6542 221 ELHPES 226 (334)
Q Consensus 221 ~~~~~~ 226 (334)
||...+
T Consensus 221 p~~~~~ 226 (280)
T cd05581 221 PFRGSN 226 (280)
T ss_pred CCCCcc
Confidence 766544
No 376
>KOG1006|consensus
Probab=99.91 E-value=1.6e-25 Score=194.16 Aligned_cols=191 Identities=15% Similarity=0.163 Sum_probs=146.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHH-HHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEI-FNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~i-l~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++.+-|++-.++++|+..|||.|+....+. ..+++..|.+. ++.-+.||| |++|++....+..||.||+
T Consensus 74 ~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~I--------VkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 74 NGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNI--------VKFYGALFSEGDCWICMEL 144 (361)
T ss_pred CCcchhhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHH--------HHHhhhhhcCCceeeeHHH
Confidence 6778899999999999999999999887644 34566667775 556678999 9999999999999999999
Q ss_pred cCCChhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPKDQISRSKI-NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l~~l~~~~~-~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
|+-++|.+...-. ...+..++..+..|....+.||+||-+.-+ |||||+||+|||++..|.|||
T Consensus 145 Md~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk---------------iIHRDvKPSNILldr~G~vKL 209 (361)
T KOG1006|consen 145 MDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK---------------IIHRDVKPSNILLDRHGDVKL 209 (361)
T ss_pred HhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh---------------hhhccCChhheEEecCCCEee
Confidence 9999776544322 122344555566777788999999987543 999999999999999999999
Q ss_pred EecccccccCCCCCCc-cccCcccccccc---ccccC-Ccceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKPHA-SVESDCILHGYI---KKLGG-PFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~~~-~~~t~~~~~~~v---~~~~~-~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||||+|-.+..+...+ ..|-..||+||- ...|| -.+|+|| +..+..+++.+|+.+.+
T Consensus 210 CDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~ 273 (361)
T KOG1006|consen 210 CDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD 273 (361)
T ss_pred ecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH
Confidence 9999998776665433 456667888885 23344 4788888 33344477788876655
No 377
>KOG0664|consensus
Probab=99.91 E-value=7.5e-26 Score=196.98 Aligned_cols=187 Identities=15% Similarity=0.172 Sum_probs=147.6
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-----CeEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-----NSHYII 87 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-----~~~~iv 87 (334)
+-++-||-+.+..+|+.||+|.+......-...+++.+|..++..++|.|+ ....|..+-. +.+|++
T Consensus 64 GAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNV--------LSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 64 GAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV--------LSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred cceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccH--------HHHHHhcCCCCchHHHHHHHH
Confidence 446789999999999999999987665555566788899999999999999 7777776633 247899
Q ss_pred EEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 88 GVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 88 mEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
+|++..+++.++-+.- .+ ...-+.-+++||++||.|||+.+ |+||||||.|.|+++++.+
T Consensus 136 TELmQSDLHKIIVSPQ-~L---s~DHvKVFlYQILRGLKYLHsA~----------------ILHRDIKPGNLLVNSNCvL 195 (449)
T KOG0664|consen 136 TELMQSDLHKIIVSPQ-AL---TPDHVKVFVYQILRGLKYLHTAN----------------ILHRDIKPGNLLVNSNCIL 195 (449)
T ss_pred HHHHHhhhhheeccCC-CC---CcchhhhhHHHHHhhhHHHhhcc----------------hhhccCCCccEEeccCceE
Confidence 9999999877655431 23 22333344569999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCCCcc---ccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHAS---VESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~---~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
||||||||+....+..... .-|.+|-+||++ ..++...|+|+ |++..+.+.+.-|...+.
T Consensus 196 KICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 196 KICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred EecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 9999999998877654332 238899999983 44455677777 999998988887776664
No 378
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91 E-value=7.5e-24 Score=192.54 Aligned_cols=186 Identities=18% Similarity=0.128 Sum_probs=141.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+++...||+|....+++.||||.+........ .....+|+..++.++ |+|+ +++++++.+++..|+||||
T Consensus 9 ~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~e~~~l~~~~~h~~i--------~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 9 DGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNEHPNI--------VKLKEVFRENDELYFVFEY 79 (283)
T ss_pred cCCceEEEEEEECCCCcEEEEEEehhhccchh-HHHHHHHHHHHHhccCCCCc--------hhHHHHhhcCCcEEEEEec
Confidence 46678999999999999999999876543211 123346899999999 9999 9999999999999999999
Q ss_pred cCCCh-hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 91 QSGPK-DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 91 ~~g~l-~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
+.|.+ +.+...... ......++.++.|++.+|.|||+++ ++|+||+|+||++++++.++|
T Consensus 80 ~~~~l~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~~----------------i~H~dl~~~ni~i~~~~~~~l 140 (283)
T cd07830 80 MEGNLYQLMKDRKGK---PFSESVIRSIIYQILQGLAHIHKHG----------------FFHRDLKPENLLVSGPEVVKI 140 (283)
T ss_pred CCCCHHHHHHhcccc---cCCHHHHHHHHHHHHHHHHHHHHCC----------------cccCCCChhhEEEcCCCCEEE
Confidence 96664 333222211 2245556777889999999999999 999999999999999999999
Q ss_pred EecccccccCCCCC-CccccCcccccccccc---ccCCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 170 SDLGLACDFSKKKP-HASVESDCILHGYIKK---LGGPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 170 ~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~---~~~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|||++........ ....++..|++||+.. .....+|.|+ ++++++. +.+||.+.+
T Consensus 141 ~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~-g~~~~~~~~ 203 (283)
T cd07830 141 ADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT-LRPLFPGSS 203 (283)
T ss_pred eecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh-CCCccCCCC
Confidence 99999987655433 2345678899999742 2245677777 5566655 566775554
No 379
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.90 E-value=6e-23 Score=188.54 Aligned_cols=186 Identities=11% Similarity=-0.032 Sum_probs=128.3
Q ss_pred CCCceEEEeceeCCC---CCcEEEEEeeCCCcchHHh---------hhHHHHHHHHHhcCCCCcccccccceeeEEEEee
Q psy6542 12 RVSKWRVKPPSLKPL---GFPIQIGMLRHRPHESRVA---------KWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS 79 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~---~~~vAIK~l~~~~~~~~~~---------~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~ 79 (334)
.++.+.||+|.+..+ +..+|+|+........... .....+...+..+.|+++ +++++.+.
T Consensus 22 ~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i--------~~~~~~~~ 93 (294)
T PHA02882 22 CGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI--------PKYYGCGS 93 (294)
T ss_pred cCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC--------CcEEEeee
Confidence 477889999999888 7778888754333211000 111223344566789999 99998766
Q ss_pred cCC----eEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC
Q psy6542 80 EPN----SHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK 155 (334)
Q Consensus 80 ~~~----~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK 155 (334)
... ..+++||++...+..+.... ... ....+..++.|++.||.|||+++ |+|||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~i~~qi~~~l~~lH~~~----------------iiHrDiK 153 (294)
T PHA02882 94 FKRCRMYYRFILLEKLVENTKEIFKRI-KCK---NKKLIKNIMKDMLTTLEYIHEHG----------------ISHGDIK 153 (294)
T ss_pred EecCCceEEEEEEehhccCHHHHHHhh-ccC---CHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCC
Confidence 443 45788998877643332221 112 34446678889999999999999 9999999
Q ss_pred CCceeeCCCCCEEEEecccccccCCCC---------CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCC
Q psy6542 156 PANILLDEHGHVRISDLGLACDFSKKK---------PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 156 p~NiLl~~~~~vkl~DFGla~~~~~~~---------~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~ 221 (334)
|+|||++.++.++|+|||+|+.+.... .....||+.|++|++.. .. +..+|+|+ ++|++ .++.+|
T Consensus 154 p~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el-~~g~~P 232 (294)
T PHA02882 154 PENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW-AGIKLP 232 (294)
T ss_pred HHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH-HhCCCC
Confidence 999999999999999999998664221 12346899999999843 22 44566666 55665 556788
Q ss_pred CCCCC
Q psy6542 222 LHPES 226 (334)
Q Consensus 222 ~~~~~ 226 (334)
|.+.+
T Consensus 233 ~~~~~ 237 (294)
T PHA02882 233 WKGFG 237 (294)
T ss_pred CCccc
Confidence 86654
No 380
>KOG0665|consensus
Probab=99.90 E-value=2.5e-24 Score=191.10 Aligned_cols=182 Identities=19% Similarity=0.170 Sum_probs=145.7
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC------CeEEEEEEc
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP------NSHYIIGVR 90 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~------~~~~ivmEy 90 (334)
-|-.|.+.-++++||||.+..........++..+|..++..+.|+|| ++++.+|.-. ...|+||||
T Consensus 31 ~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~ni--------i~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 31 IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNI--------ISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccce--------eeeeeccCccccHHHHHhHHHHHHh
Confidence 57788889999999999998776655566778899999999999999 9999999733 357999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+++++..... .+..-..+-.+++|++.|+.|||+.+ |+||||||+||+++.++.+||.
T Consensus 103 m~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~~----------------IihRdLkPsnivv~~~~~lKi~ 160 (369)
T KOG0665|consen 103 MDANLCQVIL------MELDHETISYILYQMLCGIKHLHSAG----------------IIHRDLKPSNIVVNSDCTLKIL 160 (369)
T ss_pred hhhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhcc----------------eeecccCcccceecchhheeec
Confidence 9999544333 22244555667789999999999999 9999999999999999999999
Q ss_pred ecccccccCCC-CCCccccCccccccccc-cccCC-cceeeh--hHHHHHcCCCCCCCCCCCC
Q psy6542 171 DLGLACDFSKK-KPHASVESDCILHGYIK-KLGGP-FVSAWQ--TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 171 DFGla~~~~~~-~~~~~~~t~~~~~~~v~-~~~~~-~~~~w~--~~~~~l~~~~~~~~~~~~~ 228 (334)
|||+|+....+ ....+..+-+|-+||+. ..+|. ..|+|+ |+...|..+..-|.|....
T Consensus 161 dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~i 223 (369)
T KOG0665|consen 161 DFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHI 223 (369)
T ss_pred cchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHH
Confidence 99999988777 34446678888889973 44455 566666 7777777777777776643
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.90 E-value=5.7e-23 Score=187.61 Aligned_cols=184 Identities=15% Similarity=0.140 Sum_probs=136.4
Q ss_pred CCCceEEEecee---CCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSL---KPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~---~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
.++...||++.+ ..+++.||||.+++... .....+.+.+|++++..+ +|||+ +++++.+..+..+|
T Consensus 10 ~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i--------~~~~~~~~~~~~~~ 81 (288)
T cd05583 10 TGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL--------VTLHYAFQTDTKLH 81 (288)
T ss_pred cCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcch--------hhhheeeecCCEEE
Confidence 345567887764 46789999999986433 223445677899999999 59999 99999999999999
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||+.|+ +....... ..+ ....+..++.|++.||.|||+.+ ++||||||.||+++.+
T Consensus 82 lv~e~~~~~~L~~~~~~~-~~~---~~~~~~~~~~ql~~~l~~lH~~~----------------~~H~dl~p~nil~~~~ 141 (288)
T cd05583 82 LILDYVNGGELFTHLYQR-EHF---TESEVRVYIAEIVLALDHLHQLG----------------IIYRDIKLENILLDSE 141 (288)
T ss_pred EEEecCCCCcHHHHHhhc-CCc---CHHHHHHHHHHHHHHHHHHHHCC----------------eeccCCCHHHeEECCC
Confidence 999999987 32222211 122 34455667779999999999999 9999999999999999
Q ss_pred CCEEEEecccccccCCCCC---CccccCccccccccccc----cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 165 GHVRISDLGLACDFSKKKP---HASVESDCILHGYIKKL----GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~---~~~~~t~~~~~~~v~~~----~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+.++|+|||+++.+..... ....++..|++||.... ....+|+|+ ++|+++. +..||..
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~ 210 (288)
T cd05583 142 GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT-GASPFTV 210 (288)
T ss_pred CCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHh-CCCCccc
Confidence 9999999999986544322 23457888999997432 244567776 5566654 6666643
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.89 E-value=1.2e-22 Score=206.25 Aligned_cols=159 Identities=14% Similarity=0.159 Sum_probs=129.2
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.+++.+.||+|.+..+++.||||+++.... .......+..|+.+++.++|||| +++++++...+.+|||||
T Consensus 13 G~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I--------v~~~~~~~~~~~~~lVmE 84 (669)
T cd05610 13 SRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI--------VHLYYSLQSANNVYLVME 84 (669)
T ss_pred ecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc--------CeEEEEEEECCEEEEEEe
Confidence 467888999999999999999999986544 34445678889999999999999 999999999999999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVR 168 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vk 168 (334)
|+.|+ +..++... ..+ ....++.++.||+.||.|||.++ |+||||||+|||++.++.+|
T Consensus 85 y~~g~~L~~li~~~-~~l---~~~~~~~i~~qil~aL~yLH~~g----------------IiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 85 YLIGGDVKSLLHIY-GYF---DEEMAVKYISEVALALDYLHRHG----------------IIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred CCCCCCHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC----------------EEeCCccHHHEEEcCCCCEE
Confidence 99887 54333221 122 33445677789999999999999 99999999999999999999
Q ss_pred EEecccccccCCCC--CCccccCcccccccc
Q psy6542 169 ISDLGLACDFSKKK--PHASVESDCILHGYI 197 (334)
Q Consensus 169 l~DFGla~~~~~~~--~~~~~~t~~~~~~~v 197 (334)
|+|||+++...... .....+|+.|++|+.
T Consensus 145 L~DFGls~~~~~~~~~~~~~~~t~~~~~pe~ 175 (669)
T cd05610 145 LTDFGLSKVTLNRELNMMDILTTPSMAKPKN 175 (669)
T ss_pred EEeCCCCccccCCcccccccccCccccCccc
Confidence 99999998765443 233456777887775
No 383
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.89 E-value=7.3e-23 Score=183.88 Aligned_cols=186 Identities=17% Similarity=0.114 Sum_probs=136.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+++...||++.+..++..+++|+++.... .......+..|+.+++.++|||+ +++++.+.++...++||
T Consensus 10 ~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--------~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 10 KGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAI--------VKFHASFLERDAFCIIT 81 (260)
T ss_pred CCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcH--------HHHHHHHhcCCceEEEE
Confidence 56778999999998888888888875432 22223356679999999999999 99999999899999999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||+.++ ++.+................+.++.|++.||.|||+.+ ++|+||||+||++++ +.+
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~----------------i~h~~l~~~nili~~-~~~ 144 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR----------------ILHRDLKAKNIFLKN-NLL 144 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC----------------ccccCCChhheEeec-CCE
Confidence 999987 54433321111123355566777889999999999999 999999999999975 569
Q ss_pred EEEecccccccCCCC--CCccccCcccccccccc-cc-CCcceeeh---hHHHHHcCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK--PHASVESDCILHGYIKK-LG-GPFVSAWQ---TRYAKLFPNRLELH 223 (334)
Q Consensus 168 kl~DFGla~~~~~~~--~~~~~~t~~~~~~~v~~-~~-~~~~~~w~---~~~~~l~~~~~~~~ 223 (334)
+|+|||++....... .....++..|++||... .. ...+|+|+ ++|+++. +..||.
T Consensus 145 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~-~~~~~~ 206 (260)
T cd08222 145 KIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC-LAHAFE 206 (260)
T ss_pred eecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Confidence 999999998664432 22345678899999742 22 34566666 5556554 444553
No 384
>KOG1152|consensus
Probab=99.89 E-value=1.4e-23 Score=198.45 Aligned_cols=166 Identities=17% Similarity=0.160 Sum_probs=135.5
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCc--chHHhh----hHHHHHHHHHhcC---CCCcccccccceeeEEEEeecCCeEE
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPH--ESRVAK----WRPYIQEIFNHLR---NEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~--~~~~~~----~~~~E~~il~~l~---h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
-++|++|.+++.+..|.||.|++.+. +..++. -..-|++||..++ |+|| +++.++|++++++|
T Consensus 574 yGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI--------lKlLdfFEddd~yy 645 (772)
T KOG1152|consen 574 YGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI--------LKLLDFFEDDDYYY 645 (772)
T ss_pred cceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch--------hhhhheeecCCeeE
Confidence 45999999999999999999998764 222221 3345999999998 9999 99999999999999
Q ss_pred EEEEccCCC---hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 86 IIGVRQSGP---KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 86 ivmEy~~g~---l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
|+||-...| +|++-... +..+ ...-.|+.|++.|+.+||+.+ |||||||-+|++++
T Consensus 646 l~te~hg~gIDLFd~IE~kp--~m~E---~eAk~IFkQV~agi~hlh~~~----------------ivhrdikdenvivd 704 (772)
T KOG1152|consen 646 LETEVHGEGIDLFDFIEFKP--RMDE---PEAKLIFKQVVAGIKHLHDQG----------------IVHRDIKDENVIVD 704 (772)
T ss_pred EEecCCCCCcchhhhhhccC--ccch---HHHHHHHHHHHhccccccccC----------------ceecccccccEEEe
Confidence 999977666 44443322 3333 333445669999999999999 99999999999999
Q ss_pred CCCCEEEEecccccccCCCCCCccccCcccccccccc---ccCCcceeeh
Q psy6542 163 EHGHVRISDLGLACDFSKKKPHASVESDCILHGYIKK---LGGPFVSAWQ 209 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~---~~~~~~~~w~ 209 (334)
.+|.+||+|||.|....++.-..+.||.-|++||++. +-+...|+|.
T Consensus 705 ~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwa 754 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWA 754 (772)
T ss_pred cCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhh
Confidence 9999999999999988888888899999999999953 2355667777
No 385
>KOG0199|consensus
Probab=99.88 E-value=1.5e-22 Score=195.01 Aligned_cols=228 Identities=16% Similarity=0.119 Sum_probs=168.3
Q ss_pred CCCceEEEeceeCC-CC--CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 12 RVSKWRVKPPSLKP-LG--FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-~~--~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
.++++-|+.+.-+. .| ..||||.++...... ....|.+|+.+|.+|+|+|+ +++|++..+ ....|||
T Consensus 120 ~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hl--------iRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 120 EGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHL--------IRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred CcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcce--------eEEeeeecc-chhhHHh
Confidence 35677777776543 33 357999999887754 45578899999999999999 999999987 7899999
Q ss_pred EccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC
Q psy6542 89 VRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH 166 (334)
Q Consensus 89 Ey~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~ 166 (334)
|++.+| ++.+.......+ ....+-.++.||+.|+.||..++ +|||||-..|+|+.....
T Consensus 190 ELaplGSLldrLrka~~~~l---lv~~Lcdya~QiA~aM~YLeskr----------------lvHRDLAARNlllasprt 250 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAIL---LVSRLCDYAMQIAKAMQYLESKR----------------LVHRDLAARNLLLASPRT 250 (1039)
T ss_pred hhcccchHHHHHhhccccce---eHHHHHHHHHHHHHHHHHHhhhh----------------hhhhhhhhhhheecccce
Confidence 999999 666655232233 44555567779999999999999 999999999999999999
Q ss_pred EEEEecccccccCCCCCCcccc-----Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhc
Q psy6542 167 VRISDLGLACDFSKKKPHASVE-----SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFM 236 (334)
Q Consensus 167 vkl~DFGla~~~~~~~~~~~~~-----t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~ 236 (334)
|||+||||.+.+.........+ ...+++||.++ ..+..+|+|. ++|||+.++.-||.|.+. .+
T Consensus 251 VKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g---~q---- 323 (1039)
T KOG0199|consen 251 VKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG---IQ---- 323 (1039)
T ss_pred eeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH---HH----
Confidence 9999999999887665432222 35567888643 3355677777 999999999988877652 11
Q ss_pred ccccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccch
Q psy6542 237 DQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHKC 299 (334)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~ 299 (334)
|...+ |-..|+..+ +.++..+..++..||.-...++..+
T Consensus 324 ------------------IL~~i--D~~erLpRP----k~csedIY~imk~cWah~paDRptF 362 (1039)
T KOG0199|consen 324 ------------------ILKNI--DAGERLPRP----KYCSEDIYQIMKNCWAHNPADRPTF 362 (1039)
T ss_pred ------------------HHHhc--cccccCCCC----CCChHHHHHHHHHhccCCccccccH
Confidence 11111 122233333 6667788888899998776655555
No 386
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.88 E-value=8.9e-22 Score=208.24 Aligned_cols=173 Identities=11% Similarity=0.083 Sum_probs=129.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.+.||+|..+.+|..||||.+...... ...|++++++++|||| |++++++.+++..|+||||+
T Consensus 700 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnI--------v~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 700 RGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNI--------VKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred cCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCc--------ceEEEEEEcCCCCEEEEeCC
Confidence 567789999999999999999998743321 1236889999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
+|+ +..+.. .+ .......++.|++.||.|||.... ++|+||||||+||+++.++..++.
T Consensus 766 ~~g~L~~~l~----~l---~~~~~~~i~~~ia~~L~yLH~~~~-------------~~iiH~dlkp~Nil~~~~~~~~~~ 825 (968)
T PLN00113 766 EGKNLSEVLR----NL---SWERRRKIAIGIAKALRFLHCRCS-------------PAVVVGNLSPEKIIIDGKDEPHLR 825 (968)
T ss_pred CCCcHHHHHh----cC---CHHHHHHHHHHHHHHHHHhccCCC-------------CCeecCCCCHHhEEECCCCceEEE
Confidence 988 543332 12 334456778899999999995421 229999999999999999888775
Q ss_pred ecccccccCCCCCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCC
Q psy6542 171 DLGLACDFSKKKPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 171 DFGla~~~~~~~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
||.+...... ....++..|++||+.. ....++|+|+ ++||++. +..||
T Consensus 826 -~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t-g~~p~ 878 (968)
T PLN00113 826 -LSLPGLLCTD--TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT-GKSPA 878 (968)
T ss_pred -eccccccccC--CCccccccccCcccccCCCCCcccchhhHHHHHHHHHh-CCCCC
Confidence 7766543322 2235788999999853 2345677777 6667655 45565
No 387
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=6e-22 Score=185.66 Aligned_cols=147 Identities=14% Similarity=0.070 Sum_probs=111.4
Q ss_pred CCCceEEEeceeCC-CCCcEEEEEeeCCCc---chHHhhhHHHHHHHHHhcCCCCccccccccee-eEEEEeecCCeEEE
Q psy6542 12 RVSKWRVKPPSLKP-LGFPIQIGMLRHRPH---ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKM-NLYKVTSEPNSHYI 86 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-~~~~vAIK~l~~~~~---~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v-~~~~~~~~~~~~~i 86 (334)
+++...||+|.++. +++.||||.+..... .......+.+|+++|+.++|+|+ + .+++. +..|+
T Consensus 28 ~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~i--------v~~l~~~----~~~~L 95 (365)
T PRK09188 28 RDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGV--------VPQLLAT----GKDGL 95 (365)
T ss_pred ecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCC--------CcEEEEc----CCcEE
Confidence 67888999999886 788889998764321 23345678899999999999998 6 45543 45799
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC-CCCceeeCCC
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL-KPANILLDEH 164 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl-Kp~NiLl~~~ 164 (334)
||||++|+ +... . .. .. ..++.|++.+|.|||+++ |+|||| ||+|||++.+
T Consensus 96 VmE~~~G~~L~~~-~----~~---~~---~~~~~~i~~aL~~lH~~g----------------IiHrDL~KP~NILv~~~ 148 (365)
T PRK09188 96 VRGWTEGVPLHLA-R----PH---GD---PAWFRSAHRALRDLHRAG----------------ITHNDLAKPQNWLMGPD 148 (365)
T ss_pred EEEccCCCCHHHh-C----cc---ch---HHHHHHHHHHHHHHHHCC----------------CeeCCCCCcceEEEcCC
Confidence 99999998 4311 1 00 11 245569999999999999 999999 9999999999
Q ss_pred CCEEEEecccccccCCCCC----------CccccCcccccccc
Q psy6542 165 GHVRISDLGLACDFSKKKP----------HASVESDCILHGYI 197 (334)
Q Consensus 165 ~~vkl~DFGla~~~~~~~~----------~~~~~t~~~~~~~v 197 (334)
+.+||+|||+|+.+..... ....++..|++||+
T Consensus 149 ~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~ 191 (365)
T PRK09188 149 GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDA 191 (365)
T ss_pred CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCccc
Confidence 9999999999996654431 22345666777776
No 388
>KOG0576|consensus
Probab=99.88 E-value=1.6e-23 Score=200.86 Aligned_cols=227 Identities=14% Similarity=0.057 Sum_probs=161.7
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+.-+-||+|+++.+++..|+|+++....++ .+-.++|+-+++.++|||| |.+|+.+-..+.+||.||||.
T Consensus 26 gTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~ni--------vay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 26 GTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNI--------VAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred CcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcCh--------HHHHhhhhhhcCcEEEEEecC
Confidence 344589999999999999999999887754 3456779999999999999 999999999999999999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
|| ++.+.. .-..+ .+.++...+.+.+.||.|||+.+ -+|||||-+|||+++.|.||++|
T Consensus 96 ggslQdiy~-~Tgpl---selqiayvcRetl~gl~ylhs~g----------------k~hRdiKGanilltd~gDvklaD 155 (829)
T KOG0576|consen 96 GGSLQDIYH-VTGPL---SELQIAYVCRETLQGLKYLHSQG----------------KIHRDIKGANILLTDEGDVKLAD 155 (829)
T ss_pred CCcccceee-ecccc---hhHHHHHHHhhhhccchhhhcCC----------------cccccccccceeecccCceeecc
Confidence 99 433312 12233 44445566779999999999999 89999999999999999999999
Q ss_pred cccccccCCCC--CCccccCcccccccc----ccccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhccccc-
Q psy6542 172 LGLACDFSKKK--PHASVESDCILHGYI----KKLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIE- 240 (334)
Q Consensus 172 FGla~~~~~~~--~~~~~~t~~~~~~~v----~~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~- 240 (334)
||.+..+.... ..++.||+++|+||| ...+|....|+| ...++ .--++|.+........-++....+-
T Consensus 156 fgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel-~eLqpplfdlhpmr~l~LmTkS~~qp 234 (829)
T KOG0576|consen 156 FGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIEL-GELQPPLFDLHPMRALFLMTKSGFQP 234 (829)
T ss_pred cCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhh-hhcCCcccccchHHHHHHhhccCCCC
Confidence 99998776654 467899999999998 356677666666 22232 3333343332211111111111110
Q ss_pred --ccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 241 --EVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 241 --~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
-.....|...-...+...+.++|+.|.+.+
T Consensus 235 p~lkDk~kws~~fh~fvK~altknpKkRptae 266 (829)
T KOG0576|consen 235 PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAE 266 (829)
T ss_pred CcccCCccchHHHHHHHHHHhcCCCccCCChh
Confidence 011122222234567777788888888876
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.88 E-value=8e-22 Score=173.61 Aligned_cols=180 Identities=22% Similarity=0.247 Sum_probs=140.8
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP 94 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~ 94 (334)
...||+|....+|+.||+|++........ .+.+.+|+++++.++|+|+ +++++.+..+...+++|||++++
T Consensus 2 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i--------~~~~~~~~~~~~~~l~~e~~~~~ 72 (244)
T smart00220 2 FGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNI--------VRLYDVFEDEDKLYLVMEYCDGG 72 (244)
T ss_pred ceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcH--------HHHHhheeeCCEEEEEEeCCCCC
Confidence 46899999999999999999987655332 5678889999999999999 99999999989999999999996
Q ss_pred -hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecc
Q psy6542 95 -KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLG 173 (334)
Q Consensus 95 -l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFG 173 (334)
+..+..... . ......+.++.|++.++.|||+.+ ++|+||+|+||++++++.++|+|||
T Consensus 73 ~L~~~~~~~~-~---~~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~~i~~~ni~~~~~~~~~l~d~~ 132 (244)
T smart00220 73 DLFDLLKKRG-R---LSEDEARFYARQILSALEYLHSNG----------------IIHRDLKPENILLDEDGHVKLADFG 132 (244)
T ss_pred CHHHHHHhcc-C---CCHHHHHHHHHHHHHHHHHHHHcC----------------eecCCcCHHHeEECCCCcEEEcccc
Confidence 543322221 1 345566778889999999999999 9999999999999999999999999
Q ss_pred cccccCCC-CCCccccCcccccccccc--ccCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 174 LACDFSKK-KPHASVESDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 174 la~~~~~~-~~~~~~~t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
++...... ......++..|++||... .....+|+|+ ++++++. +..||..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~-~~~p~~~ 188 (244)
T smart00220 133 LARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLT-GKPPFPG 188 (244)
T ss_pred ceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Confidence 99877654 233455678889999753 2344566666 5555554 5556543
No 390
>KOG3653|consensus
Probab=99.88 E-value=7.6e-22 Score=183.11 Aligned_cols=178 Identities=14% Similarity=0.140 Sum_probs=138.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHh--cCCCCcccccccceeeEEEEeecCC----eE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNH--LRNEPFKKCVLLFKMNLYKVTSEPN----SH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~--l~h~~i~~~~~~~~v~~~~~~~~~~----~~ 84 (334)
.|+..+.||+|.... +.||||++.. ...+.+++|-+|++. ++|+|| ++|+++-.... .+
T Consensus 219 ~~Grfg~V~KaqL~~--~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nI--------l~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 219 GRGRFGCVWKAQLDN--RLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENI--------LQFIGAEKRGTADRMEY 283 (534)
T ss_pred hcCccceeehhhccC--ceeEEEecCH-----HHHHHHHhHHHHHhccCccchhH--------HHhhchhccCCccccce
Confidence 367788999997655 9999999873 244578889999886 789999 99998877554 79
Q ss_pred EEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeC
Q psy6542 85 YIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLD 162 (334)
Q Consensus 85 ~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~ 162 (334)
++|+||.+.| -++++.+-+ ......+++..+++||.|||+.-. +.-.-+|+|+|||||.+|||+.
T Consensus 284 wLVt~fh~kGsL~dyL~~nti------sw~~~cria~SmarGLa~LHee~p-------~~d~~Kp~IaHRDlkSkNVLvK 350 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANTI------SWNSLCRIAESMARGLAHLHEELP-------RGDHHKPPIAHRDLKSKNVLVK 350 (534)
T ss_pred eEEeeeccCCcHHHHHHhccc------cHHHHHHHHHHHHHHHHHhcccCC-------cCCCCCCccccccccccceEEc
Confidence 9999998877 455544432 444456777899999999999752 4456789999999999999999
Q ss_pred CCCCEEEEecccccccCCCC----CCccccCccccccccccccCC--------cceeeh---hHHHHHc
Q psy6542 163 EHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIKKLGGP--------FVSAWQ---TRYAKLF 216 (334)
Q Consensus 163 ~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~~~~~~--------~~~~w~---~~~~~l~ 216 (334)
+|+++.|+|||||..+..+. .....||..||+||++..... ..|+.+ ++||++.
T Consensus 351 ~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~S 419 (534)
T KOG3653|consen 351 NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIAS 419 (534)
T ss_pred cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999876554 345678999999999543322 345555 6777764
No 391
>KOG1025|consensus
Probab=99.87 E-value=1.4e-22 Score=198.02 Aligned_cols=238 Identities=16% Similarity=0.120 Sum_probs=171.8
Q ss_pred CceEEEeceeCCC----CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 14 SKWRVKPPSLKPL----GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 14 ~~~~V~~a~~~~~----~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
-++.||++..... +.+||||++....... ..+.+..|+-+|..++|||+ +++.+++.... +-||++
T Consensus 708 AfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~-~s~e~LdeAl~masldHpnl--------~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 708 AFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK-ASIELLDEALRMASLDHPNL--------LRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred cceeEEeeeEecCCceecceeEEEEeeccCCch-hhHHHHHHHHHHhcCCCchH--------HHHhhhcccch-HHHHHH
Confidence 3567777765443 4567999988766533 34567889999999999999 99999987655 789999
Q ss_pred ccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 90 RQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 90 y~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|+++| +|++..++ .....+.++.|++||++||.|||++. ++||||-..|+|+.+-.+|
T Consensus 778 ~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~qr----------------lVHrdLaaRNVLVksP~hv 837 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEEQR----------------LVHRDLAARNVLVKSPNHV 837 (1177)
T ss_pred hcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhcc----------------hhhhhhhhhheeecCCCeE
Confidence 99999 77776654 33356677899999999999999999 9999999999999999999
Q ss_pred EEEecccccccCCCCCCccccCcccccccc------ccccCCcceeeh---hHHHHHcCCCCCCCCCCCCCcccchhccc
Q psy6542 168 RISDLGLACDFSKKKPHASVESDCILHGYI------KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQSKPELIFMDQ 238 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~~~t~~~~~~~v------~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 238 (334)
||.|||+|+.+..+..........++.+++ .......+|+|+ .+||+|+.+.-|+.+.+..+.++++
T Consensus 838 kitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll---- 913 (1177)
T KOG1025|consen 838 KITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL---- 913 (1177)
T ss_pred EEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH----
Confidence 999999999887765433322223444444 234456788888 9999999988888776633222211
Q ss_pred ccccccccccHhHHHHHHHhhccCchhhcCCCcccCCCCCCCCChhhHHHhhhhccccc--chhHHHHHHHHHHhC
Q psy6542 239 IEEVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAH--KCSQELLGSMARKAG 312 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--r~~~~lL~~l~~~~~ 312 (334)
+ .+..+++.+..+.++..+++.||+.....+. +...+-..+|.+.+.
T Consensus 914 ----------------------e-----~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 914 ----------------------E-----KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred ----------------------h-----ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 1 1112334577778888888999987643333 334444555555443
No 392
>KOG0671|consensus
Probab=99.87 E-value=7.4e-22 Score=179.02 Aligned_cols=282 Identities=16% Similarity=0.108 Sum_probs=185.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCC--CCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRN--EPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h--~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+-+++|-.+++.+++..||||+++.... ......-|+++++++.+ |+- ..-+|++.++|+-.++.|||+|.
T Consensus 100 GtFGkV~ec~D~~~~~~vAlKIik~V~k---YreAa~iEi~vLqki~~~DP~g----~~rcv~m~~wFdyrghiCivfel 172 (415)
T KOG0671|consen 100 GTFGKVVECWDRETKEHVALKIIKNVDK---YREAALIEIEVLQKINESDPNG----KFRCVQMRDWFDYRGHICIVFEL 172 (415)
T ss_pred CcccceEEEeecCCCceehHHHHHHHHH---HhhHHHHHHHHHHHHHhcCCCC----ceEEEeeehhhhccCceEEEEec
Confidence 5567999999999999999999995443 22234459999999842 331 11248999999999999999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC------
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE------ 163 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~------ 163 (334)
++-+ .|++..+....+ +...+..+..|++.++.|||+.+ ++|-||||+|||+.+
T Consensus 173 lG~S~~dFlk~N~y~~f---pi~~ir~m~~QL~~sv~fLh~~k----------------l~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 173 LGLSTFDFLKENNYIPF---PIDHIRHMGYQLLESVAFLHDLK----------------LTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred cChhHHHHhccCCcccc---chHHHHHHHHHHHHHHHHHHhcc----------------eeecCCChheEEEeccceEEE
Confidence 9866 788877655555 55666677789999999999999 999999999999932
Q ss_pred --------------CCCEEEEecccccccCCCCCCccccCcccccccc-cccc-CCcceeeh--hHHHHHcCCCCCCCCC
Q psy6542 164 --------------HGHVRISDLGLACDFSKKKPHASVESDCILHGYI-KKLG-GPFVSAWQ--TRYAKLFPNRLELHPE 225 (334)
Q Consensus 164 --------------~~~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v-~~~~-~~~~~~w~--~~~~~l~~~~~~~~~~ 225 (334)
+..++|+|||.|+...+.. .+...|-.|-+||| +..| +.+.|+|| |+...+++|..-|+..
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 2458999999998766665 34556888999998 5666 45677777 4444445555556666
Q ss_pred CCCCcccchhccccc-ccccccccHhHHHHHHHhhccCchhhcCCCcccCCC----CCCCCChhhHHHhhhhcccccchh
Q psy6542 226 SGQSKPELIFMDQIE-EVSQDLITVKGEQCVQLKLTRDTRIVLTNPVSQIKG----PFPHVDEIGLKEWSLSLRSAHKCS 300 (334)
Q Consensus 226 ~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~r~~ 300 (334)
.+ .-++.+++.+. ++|..+..- .. -.....++ ++.-+--..++ +...-.- +...+..-+......
T Consensus 313 en--~EHLaMMerIlGp~P~~mi~r--~~-~~Kyf~~~---rldw~e~~~~~~~k~v~~~ckp--l~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 313 EN--LEHLAMMERILGPIPSRMIKK--TR-KEKYFRRG---RLDWPEVSSKGKSKYVFEPCKP--LKKYMLQDDLEHVQL 382 (415)
T ss_pred Cc--HHHHHHHHHhhCCCcHHHhhh--hh-hHhhhhcc---cccCccccccccchhhhcCCcc--HHHHhccCcHHHhHH
Confidence 63 33344444443 333333310 00 11111111 11100000000 0000011 222334444555558
Q ss_pred HHHHHHHHHHhCCCCCCcccccccccccccc
Q psy6542 301 QELLGSMARKAGKIYGTTDREKNSILGTRTA 331 (334)
Q Consensus 301 ~~lL~~l~~~~~~~~~~~~~~~~~~~~~~~~ 331 (334)
.++|+.|......++-+..|.-.+|++++..
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 8889999998888899999999999988754
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.85 E-value=3.6e-21 Score=191.45 Aligned_cols=160 Identities=17% Similarity=0.100 Sum_probs=103.8
Q ss_pred CCCceEEEeceeCCC----CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEE--eecCCeEE
Q psy6542 12 RVSKWRVKPPSLKPL----GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKV--TSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~----~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~--~~~~~~~~ 85 (334)
+++.+.||+|.+..+ +..||||.+....... ....| .+....+.++.... ..++.. ...+..++
T Consensus 142 ~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e----~~~~e--~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 211 (566)
T PLN03225 142 EGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE----IWMNE--RVRRACPNSCADFV----YGFLEPVSSKKEDEYW 211 (566)
T ss_pred eCCCeEEEEEEEcCCccccCcEEEEEEecccchhH----HHHHH--HHHhhchhhHHHHH----HhhhcccccccCCceE
Confidence 578889999999999 9999999886433211 11111 11222222220000 111111 24567799
Q ss_pred EEEEccCCC-hhHHhhhhhhhh----------------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCc
Q psy6542 86 IIGVRQSGP-KDQISRSKINRY----------------HKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPC 148 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~----------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ 148 (334)
+||||++++ +..+.......+ .......+..++.|++.||.|||+++
T Consensus 212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---------------- 275 (566)
T PLN03225 212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---------------- 275 (566)
T ss_pred EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC----------------
Confidence 999999988 433322211000 01112334567889999999999999
Q ss_pred EEeeCCCCCceeeCC-CCCEEEEecccccccCCCC---CCccccCcccccccc
Q psy6542 149 LHFRDLKPANILLDE-HGHVRISDLGLACDFSKKK---PHASVESDCILHGYI 197 (334)
Q Consensus 149 iiHrDlKp~NiLl~~-~~~vkl~DFGla~~~~~~~---~~~~~~t~~~~~~~v 197 (334)
|+||||||+|||++. ++.+||+|||+|+.+.... .....+++.|++||.
T Consensus 276 IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~ 328 (566)
T PLN03225 276 IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQ 328 (566)
T ss_pred EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHH
Confidence 999999999999986 5789999999998654332 344677899999995
No 394
>KOG1027|consensus
Probab=99.85 E-value=9.3e-22 Score=192.96 Aligned_cols=218 Identities=15% Similarity=0.127 Sum_probs=149.8
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEccCCCh
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGPK 95 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~l 95 (334)
-||.+.. .|+.||||.+-... ....++|++.|+.-+ |||| |++|+.-.+.+..||..|.|...+
T Consensus 525 ~Vf~G~y--e~R~VAVKrll~e~-----~~~A~rEi~lL~eSD~H~Nv--------iRyyc~E~d~qF~YIalELC~~sL 589 (903)
T KOG1027|consen 525 VVFRGVY--EGREVAVKRLLEEF-----FDFAQREIQLLQESDEHPNV--------IRYYCSEQDRQFLYIALELCACSL 589 (903)
T ss_pred EEEEEee--CCceehHHHHhhHh-----HHHHHHHHHHHHhccCCCce--------EEEEeeccCCceEEEEehHhhhhH
Confidence 5666654 35799999876433 335567999999884 9999 999999999999999999999996
Q ss_pred hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC---CC--CEEEE
Q psy6542 96 DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE---HG--HVRIS 170 (334)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~---~~--~vkl~ 170 (334)
+.+................+..+.|++.||.+||+.+ |+||||||+||||+. ++ .++|+
T Consensus 590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~----------------iVHRDLkPQNILI~~~~~~~~~ra~iS 653 (903)
T KOG1027|consen 590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK----------------IVHRDLKPQNILISVPSADGTLRAKIS 653 (903)
T ss_pred HHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc----------------cccccCCCceEEEEccCCCcceeEEec
Confidence 6555543111111111234556679999999999999 999999999999976 34 47999
Q ss_pred ecccccccCCCCC-----CccccCcccccccccccc--CCcceeeh--h-HHHHHcCCCCCCCCCCCCCcccchhcc---
Q psy6542 171 DLGLACDFSKKKP-----HASVESDCILHGYIKKLG--GPFVSAWQ--T-RYAKLFPNRLELHPESGQSKPELIFMD--- 237 (334)
Q Consensus 171 DFGla~~~~~~~~-----~~~~~t~~~~~~~v~~~~--~~~~~~w~--~-~~~~l~~~~~~~~~~~~~~~~~~i~~~--- 237 (334)
|||+|+.+..+.. ....||..+.+||++... ....|+.+ | +|+.+.++.-|| |.+...-..++...
T Consensus 654 DfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpF-Gd~~~R~~NIl~~~~~L 732 (903)
T KOG1027|consen 654 DFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPF-GDSLERQANILTGNYTL 732 (903)
T ss_pred ccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCC-CchHHhhhhhhcCccce
Confidence 9999998876653 345679999999985433 34566666 4 455566777777 33322211221111
Q ss_pred -cccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 238 -QIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 238 -~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
.+.+.. +....+.|..++..+|..|.+..
T Consensus 733 ~~L~~~~----d~eA~dLI~~ml~~dP~~RPsa~ 762 (903)
T KOG1027|consen 733 VHLEPLP----DCEAKDLISRMLNPDPQLRPSAT 762 (903)
T ss_pred eeeccCc----hHHHHHHHHHhcCCCcccCCCHH
Confidence 111111 11355667777778888888765
No 395
>KOG0200|consensus
Probab=99.85 E-value=5.1e-21 Score=192.02 Aligned_cols=187 Identities=14% Similarity=0.100 Sum_probs=144.6
Q ss_pred CCceEEEeceeC----C---CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeE
Q psy6542 13 VSKWRVKPPSLK----P---LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 13 ~~~~~V~~a~~~----~---~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
+..++|++|... . ....||||.++....+ ...+.+..|+++|+.+. |+|| +.+.+++.+.+.+
T Consensus 307 g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~ni--------v~llG~~t~~~~~ 377 (609)
T KOG0200|consen 307 GAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNI--------VNLLGACTQDGPL 377 (609)
T ss_pred ccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcch--------hhheeeeccCCce
Confidence 455678777643 1 2567999999987776 45678889999999985 9999 9999999999999
Q ss_pred EEEEEccCCC--hhHHhhhh---------hhhhh--HHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEe
Q psy6542 85 YIIGVRQSGP--KDQISRSK---------INRYH--KKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHF 151 (334)
Q Consensus 85 ~ivmEy~~g~--l~~l~~~~---------~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiH 151 (334)
++|+||+..| ++++...+ ..... ......++.++.||+.|++||++.. ++|
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~----------------~vH 441 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP----------------CVH 441 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC----------------ccc
Confidence 9999999888 45554443 00111 1456667888999999999999999 999
Q ss_pred eCCCCCceeeCCCCCEEEEecccccccCCCCCCc---ccc--Ccccccccccc--ccCCcceeeh---hHHHHHcCCCCC
Q psy6542 152 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHA---SVE--SDCILHGYIKK--LGGPFVSAWQ---TRYAKLFPNRLE 221 (334)
Q Consensus 152 rDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~~~---~~~--t~~~~~~~v~~--~~~~~~~~w~---~~~~~l~~~~~~ 221 (334)
|||-..|||+.++..+||+|||+|+......... ..+ ...+|+||... ..+..+|+|+ ++||++..+..|
T Consensus 442 RDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 442 RDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred hhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999999654443222 121 24488898743 3456788888 999999988888
Q ss_pred CCC
Q psy6542 222 LHP 224 (334)
Q Consensus 222 ~~~ 224 (334)
+.+
T Consensus 522 Yp~ 524 (609)
T KOG0200|consen 522 YPG 524 (609)
T ss_pred CCC
Confidence 644
No 396
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=3.3e-21 Score=166.00 Aligned_cols=138 Identities=12% Similarity=0.057 Sum_probs=99.0
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchH------------------------HhhhHHHHHHHHHhcCCCCccccc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESR------------------------VAKWRPYIQEIFNHLRNEPFKKCV 67 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~------------------------~~~~~~~E~~il~~l~h~~i~~~~ 67 (334)
.++...||+|.+. +|+.||||+++....... .......|+++++.+.++++
T Consensus 7 ~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v---- 81 (190)
T cd05147 7 TGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI---- 81 (190)
T ss_pred cccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC----
Confidence 5788899999997 899999999987532110 01233459999999998876
Q ss_pred ccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh-hcCCCCCchhhhhhcCC
Q psy6542 68 LLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTC-HSALNKNPLIAIFLTLS 145 (334)
Q Consensus 68 ~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yL-H~~~~~~~~~~~~~~~~ 145 (334)
...+.+... ..+|||||++|+ +....... ..+ +...+..++.|++.+|.|+ |+.+
T Consensus 82 ----~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~---~~~~~~~i~~qi~~~L~~l~H~~g------------- 138 (190)
T cd05147 82 ----PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APL---SESKARELYLQVIQIMRILYQDCR------------- 138 (190)
T ss_pred ----CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCC---CHHHHHHHHHHHHHHHHHHHHhCC-------------
Confidence 222222222 238999999987 32221111 122 3455677788999999999 6888
Q ss_pred CCcEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 146 VPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 146 ~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
|+||||||+|||++ ++.++|+|||+|......
T Consensus 139 ---iiHrDlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 139 ---LVHADLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred ---cccCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 99999999999998 478999999999755443
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.85 E-value=2e-20 Score=163.41 Aligned_cols=184 Identities=23% Similarity=0.235 Sum_probs=142.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++...||++.+..+++.+|||.+...... ...+.+.+|++.++.++|+|+ +++++.+...+..++++||+
T Consensus 9 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i--------~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 9 EGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNI--------VKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred cCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCCh--------hhheeeeecCCceEEEEecc
Confidence 456779999999999999999999865543 234577889999999999999 99999999889999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.++ +..+....... ........++.|++.++.|||+.+ ++|+|++|+||+++.++.++|+
T Consensus 80 ~~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~~----------------i~h~di~~~ni~v~~~~~~~l~ 140 (225)
T smart00221 80 EGGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSLG----------------IVHRDLKPENILLGMDGLVKLA 140 (225)
T ss_pred CCCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhCC----------------eecCCCCHHHEEEcCCCCEEEe
Confidence 996 44333322111 245556677789999999999999 9999999999999999999999
Q ss_pred ecccccccCCCC---CCccccCcccccccccc--cc-CCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 171 DLGLACDFSKKK---PHASVESDCILHGYIKK--LG-GPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 171 DFGla~~~~~~~---~~~~~~t~~~~~~~v~~--~~-~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
|||++....... .....++..+++|++.. .. ...+|.|+ ++++++. +.+||..
T Consensus 141 d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~-g~~pf~~ 202 (225)
T smart00221 141 DFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW-GPEPFSG 202 (225)
T ss_pred eCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH-CCCCccc
Confidence 999998775542 23455677889999752 22 33455555 5566655 7888866
No 398
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=1.8e-20 Score=161.44 Aligned_cols=138 Identities=13% Similarity=0.033 Sum_probs=101.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcc------------------------hHHhhhHHHHHHHHHhcCCCCccccc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHE------------------------SRVAKWRPYIQEIFNHLRNEPFKKCV 67 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~------------------------~~~~~~~~~E~~il~~l~h~~i~~~~ 67 (334)
.++..+||+|.+. +|+.||||+++..... ......+..|.+.+.++.|+++
T Consensus 7 ~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i---- 81 (190)
T cd05145 7 TGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV---- 81 (190)
T ss_pred cCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC----
Confidence 5788899999988 8999999999976321 0012234679999999999987
Q ss_pred ccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCC
Q psy6542 68 LLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLS 145 (334)
Q Consensus 68 ~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~ 145 (334)
.....+... ..|+||||++|+ +....... ... .......++.|++.+|.++|+ .+
T Consensus 82 ----~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-~~~---~~~~~~~i~~~l~~~l~~lH~~~g------------- 138 (190)
T cd05145 82 ----PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-VPL---EEEEAEELYEQVVEQMRRLYQEAG------------- 138 (190)
T ss_pred ----CCceEEEec--CCEEEEEEecCCCchhhhhhh-ccC---CHHHHHHHHHHHHHHHHHHHHhCC-------------
Confidence 333222222 248999999987 32211111 122 334456677899999999999 99
Q ss_pred CCcEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 146 VPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 146 ~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
|+||||||+||+++ ++.++|+|||+|+.....
T Consensus 139 ---ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 139 ---LVHGDLSEYNILYH-DGKPYIIDVSQAVELDHP 170 (190)
T ss_pred ---EecCCCChhhEEEE-CCCEEEEEcccceecCCC
Confidence 99999999999998 789999999999876554
No 399
>KOG0668|consensus
Probab=99.83 E-value=1.2e-20 Score=160.98 Aligned_cols=253 Identities=18% Similarity=0.162 Sum_probs=165.1
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCC--eEEEEEEccCC
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPN--SHYIIGVRQSG 93 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~--~~~ivmEy~~g 93 (334)
.|+-+.+..+++.+.||++++.+ .+.+.+|+.||+.|+ |||| ++++++..++. ...+|+||+++
T Consensus 53 EVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NI--------i~L~DiV~Dp~SktpaLiFE~v~n 119 (338)
T KOG0668|consen 53 EVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNI--------IKLLDIVKDPESKTPSLIFEYVNN 119 (338)
T ss_pred hHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCe--------eehhhhhcCccccCchhHhhhhcc
Confidence 68889999999999999999544 345677999999997 9999 99999998764 46799999998
Q ss_pred C-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-CCEEEEe
Q psy6542 94 P-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH-GHVRISD 171 (334)
Q Consensus 94 ~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~-~~vkl~D 171 (334)
. +..+ -. .+.... +..++.|++.||.|||+.| |+|||+||.|++||.. ..++|+|
T Consensus 120 ~Dfk~l-y~---tl~d~d---IryY~~elLkALdyCHS~G----------------ImHRDVKPhNvmIdh~~rkLrlID 176 (338)
T KOG0668|consen 120 TDFKQL-YP---TLTDYD---IRYYIYELLKALDYCHSMG----------------IMHRDVKPHNVMIDHELRKLRLID 176 (338)
T ss_pred ccHHHH-hh---hhchhh---HHHHHHHHHHHHhHHHhcC----------------cccccCCcceeeechhhceeeeee
Confidence 7 3222 11 222223 3344569999999999999 9999999999999876 4599999
Q ss_pred cccccccCCCCCCc-cccCcccccccccc--ccCC-cceeeh--hHHHHH-cCCCCCCCCCCCCCcccchhccccccccc
Q psy6542 172 LGLACDFSKKKPHA-SVESDCILHGYIKK--LGGP-FVSAWQ--TRYAKL-FPNRLELHPESGQSKPELIFMDQIEEVSQ 244 (334)
Q Consensus 172 FGla~~~~~~~~~~-~~~t~~~~~~~v~~--~~~~-~~~~w~--~~~~~l-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (334)
+|||.....+...+ ...+-++-.||++- ..|. .-|.|| |+++-| +-..+.|+|.++ .-+++....+.+
T Consensus 177 WGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN--~DQLVkIakVLG--- 251 (338)
T KOG0668|consen 177 WGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVKIAKVLG--- 251 (338)
T ss_pred cchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC--HHHHHHHHHHhC---
Confidence 99999887776433 34456667788742 2244 456676 555444 455555666663 223322222221
Q ss_pred ccccHhHHHHHHHhh-----ccCchhhcCCCcccCCCCCCCCChhhHHHhhhhcccccc----h-hHHHHHHHHHHhCCC
Q psy6542 245 DLITVKGEQCVQLKL-----TRDTRIVLTNPVSQIKGPFPHVDEIGLKEWSLSLRSAHK----C-SQELLGSMARKAGKI 314 (334)
Q Consensus 245 ~~~~~~~~~~i~~~~-----~~~p~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r----~-~~~lL~~l~~~~~~~ 314 (334)
..-+...+ .-||...- + +..-.-+.|..-..+..+ + +.++|+.+.+..++.
T Consensus 252 -------t~el~~Yl~KY~i~Ldp~~~~---------i---~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqe 312 (338)
T KOG0668|consen 252 -------TDELYAYLNKYQIDLDPQFED---------I---LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQE 312 (338)
T ss_pred -------hHHHHHHHHHHccCCChhHhh---------H---hhccccccHHHhCCccccccCChHHHHHHHHHHhhcccc
Confidence 11111111 11111100 0 000012234333322222 3 889999999999998
Q ss_pred CCCcccccccccccc
Q psy6542 315 YGTTDREKNSILGTR 329 (334)
Q Consensus 315 ~~~~~~~~~~~~~~~ 329 (334)
+-+++|.-.+|.+.+
T Consensus 313 RlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 313 RLTAKEAMAHPYFAP 327 (338)
T ss_pred ccchHHHhcCchHHH
Confidence 888888777776643
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.83 E-value=4.1e-19 Score=152.26 Aligned_cols=159 Identities=24% Similarity=0.283 Sum_probs=128.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
.++.+.||++....+|+.+++|++....... ..+.+.+|+++++.++|+++ +++++++......+++|||+
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i--------~~~~~~~~~~~~~~~~~e~~ 73 (215)
T cd00180 3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNI--------VKLYGVFEDENHLYLVMEYC 73 (215)
T ss_pred cCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCe--------eeEeeeeecCCeEEEEEecC
Confidence 4678899999999999999999998665432 34567889999999999999 99999999999999999999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-CCCEEE
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE-HGHVRI 169 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~-~~~vkl 169 (334)
.|+ +..+..... ........+.++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|
T Consensus 74 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~----------------~~H~dl~~~ni~~~~~~~~~~l 134 (215)
T cd00180 74 EGGSLKDLLKENE---GKLSEDEILRILLQILEGLEYLHSNG----------------IIHRDLKPENILLDSDNGKVKL 134 (215)
T ss_pred CCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHhhEEEeCCCCcEEE
Confidence 966 544433221 12245556677889999999999999 999999999999999 899999
Q ss_pred EecccccccCCCC--CCccccCccccccccc
Q psy6542 170 SDLGLACDFSKKK--PHASVESDCILHGYIK 198 (334)
Q Consensus 170 ~DFGla~~~~~~~--~~~~~~t~~~~~~~v~ 198 (334)
+|||.+....... .....+...|++|+..
T Consensus 135 ~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 165 (215)
T cd00180 135 ADFGLSKLLTSDKSLLKTIVGTPAYMAPEVL 165 (215)
T ss_pred ecCCceEEccCCcchhhcccCCCCccChhHh
Confidence 9999998776653 3334456777888764
No 401
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.4e-19 Score=176.64 Aligned_cols=169 Identities=13% Similarity=0.064 Sum_probs=112.9
Q ss_pred CCCCceEEEecee----------------CCCCCcEEEEEeeCCCcch------------HHhhhHHHHHHHHHhcCCCC
Q psy6542 11 SRVSKWRVKPPSL----------------KPLGFPIQIGMLRHRPHES------------RVAKWRPYIQEIFNHLRNEP 62 (334)
Q Consensus 11 ~~~~~~~V~~a~~----------------~~~~~~vAIK~l~~~~~~~------------~~~~~~~~E~~il~~l~h~~ 62 (334)
-+++++.||++.. ...++.||||.+....... ........|+.++.+++|.+
T Consensus 154 G~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~ 233 (507)
T PLN03224 154 GGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNP 233 (507)
T ss_pred ecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhccc
Confidence 3578889999864 2345689999987543210 01122334777777887766
Q ss_pred cccccccceeeEEEEeec--------CCeEEEEEEccCCC-hhHHhhhhhhhh--------------------hHHHHHH
Q psy6542 63 FKKCVLLFKMNLYKVTSE--------PNSHYIIGVRQSGP-KDQISRSKINRY--------------------HKKLRKC 113 (334)
Q Consensus 63 i~~~~~~~~v~~~~~~~~--------~~~~~ivmEy~~g~-l~~l~~~~~~~~--------------------~~~~~~~ 113 (334)
+. ...++++.+++.. .+..|+||||++++ +..+.......+ .......
T Consensus 234 l~---~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~ 310 (507)
T PLN03224 234 IA---AASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINV 310 (507)
T ss_pred ch---hhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHH
Confidence 41 1222555555542 35689999999998 433322211111 0112344
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC---CccccCc
Q psy6542 114 FIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP---HASVESD 190 (334)
Q Consensus 114 ~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~---~~~~~t~ 190 (334)
+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....... ....+++
T Consensus 311 ~~~i~~ql~~aL~~lH~~~----------------ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp 374 (507)
T PLN03224 311 IKGVMRQVLTGLRKLHRIG----------------IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDP 374 (507)
T ss_pred HHHHHHHHHHHHHHHHHCC----------------eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCc
Confidence 5677889999999999999 99999999999999999999999999976544322 1223478
Q ss_pred cccccccc
Q psy6542 191 CILHGYIK 198 (334)
Q Consensus 191 ~~~~~~v~ 198 (334)
.|++||+.
T Consensus 375 ~Y~aPE~l 382 (507)
T PLN03224 375 RYSPPEEL 382 (507)
T ss_pred ceeChhhh
Confidence 89999973
No 402
>KOG1345|consensus
Probab=99.83 E-value=9.1e-21 Score=165.19 Aligned_cols=181 Identities=14% Similarity=0.069 Sum_probs=125.2
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEE-eecCCeEEEEEEc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKV-TSEPNSHYIIGVR 90 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~-~~~~~~~~ivmEy 90 (334)
|-++++.+|+++.+++.+++|.+..... ..+.|.+|...--.|. |.|| +.-|++ |++-+.+.++|||
T Consensus 35 G~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hI--------i~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 35 GRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHI--------IDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred cceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhh--------hHHHHHHhhcCceEEEeecc
Confidence 4457899999999999999999885443 3456777887655565 7788 777754 6677889999999
Q ss_pred cCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC--CCCE
Q psy6542 91 QSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE--HGHV 167 (334)
Q Consensus 91 ~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~--~~~v 167 (334)
++-| +..-.. .... .+.....++.|+++|+.|+|+++ ++|||||.+||||-. .-.|
T Consensus 104 aP~gdL~snv~--~~Gi---gE~~~K~v~~ql~SAi~fMHskn----------------lVHRdlK~eNiLif~~df~rv 162 (378)
T KOG1345|consen 104 APRGDLRSNVE--AAGI---GEANTKKVFAQLLSAIEFMHSKN----------------LVHRDLKAENILIFDADFYRV 162 (378)
T ss_pred CccchhhhhcC--cccc---cHHHHHHHHHHHHHHHHHhhccc----------------hhhcccccceEEEecCCccEE
Confidence 9888 411111 1233 33334455669999999999999 999999999999933 3469
Q ss_pred EEEecccccccCCCCCCccccCccccccccc---c----ccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKKPHASVESDCILHGYIK---K----LGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 168 kl~DFGla~~~~~~~~~~~~~t~~~~~~~v~---~----~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
||||||+.+..+...... .....|.+|++. . ...+..|+|. +++.+..+|.+||...+
T Consensus 163 KlcDFG~t~k~g~tV~~~-~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 163 KLCDFGLTRKVGTTVKYL-EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred EeeecccccccCceehhh-hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence 999999988665543221 124456666652 1 1245666666 55555566777876443
No 403
>KOG1164|consensus
Probab=99.76 E-value=1.4e-17 Score=155.17 Aligned_cols=187 Identities=14% Similarity=0.115 Sum_probs=135.4
Q ss_pred CCCCceEEEeceeCCCC-CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCC----CCcccccccceeeEEEEe-ecCCeE
Q psy6542 11 SRVSKWRVKPPSLKPLG-FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRN----EPFKKCVLLFKMNLYKVT-SEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~-~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h----~~i~~~~~~~~v~~~~~~-~~~~~~ 84 (334)
..++.+.||++.+..++ ..+|+|+......... ..+..|..++..+.+ +++ ..+++.+ ..+...
T Consensus 27 G~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~--------~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 27 GEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHF--------PKLLDHGRSTEDFN 96 (322)
T ss_pred cccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCC--------CEEEEeccCCCcee
Confidence 35678899999998875 6889999886543211 145569999998873 467 8899999 578889
Q ss_pred EEEEEccCCChhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGPKDQISRSKI-NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~-~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
||||+.+..++..+..... +.+ .....+.++.|++.+|.++|+.| ++||||||+|++++.
T Consensus 97 ~iVM~l~G~sL~dl~~~~~~~~f---s~~T~l~ia~q~l~~l~~lH~~G----------------~iHRDiKp~N~~~g~ 157 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNPPGRF---SRKTVLRIAIQNLNALEDLHSKG----------------FIHRDIKPENFVVGQ 157 (322)
T ss_pred EEEEeccCccHHHHHHhCCCCCc---CHhHHHHHHHHHHHHHHHHHhcC----------------cccCCcCHHHeeecC
Confidence 9999999999766654332 344 56667788889999999999999 999999999999987
Q ss_pred C-----CCEEEEeccccc--ccCCCC----------CCccccCcccccccc-ccccCCcceeehhHHHHH---cCCCCCC
Q psy6542 164 H-----GHVRISDLGLAC--DFSKKK----------PHASVESDCILHGYI-KKLGGPFVSAWQTRYAKL---FPNRLEL 222 (334)
Q Consensus 164 ~-----~~vkl~DFGla~--~~~~~~----------~~~~~~t~~~~~~~v-~~~~~~~~~~w~~~~~~l---~~~~~~~ 222 (334)
. ..+.|.|||+|+ .+.... ...+.||..|+++.+ ....-...||+|++++++ ..+.+||
T Consensus 158 ~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 158 SSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred CCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 5 358999999999 321111 123447888888776 344455667766333333 3344777
Q ss_pred CCCC
Q psy6542 223 HPES 226 (334)
Q Consensus 223 ~~~~ 226 (334)
.+..
T Consensus 238 ~~~~ 241 (322)
T KOG1164|consen 238 EALE 241 (322)
T ss_pred cccc
Confidence 4444
No 404
>KOG0670|consensus
Probab=99.75 E-value=1.5e-18 Score=162.85 Aligned_cols=188 Identities=17% Similarity=0.158 Sum_probs=133.9
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCChh
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGPKD 96 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~l~ 96 (334)
-|-.|.+..-|+.||||+|+.+.. +.+.=+.|++||++|....=..- .-|+++|-.|...+++|||+|-+.-++.
T Consensus 447 ~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk--~Hclrl~r~F~hknHLClVFE~LslNLR 521 (752)
T KOG0670|consen 447 TVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDK--FHCLRLFRHFKHKNHLCLVFEPLSLNLR 521 (752)
T ss_pred eeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhh--hHHHHHHHHhhhcceeEEEehhhhchHH
Confidence 456777888899999999997665 33333459999999874321000 0128899999999999999999888854
Q ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CEEEEecccc
Q psy6542 97 QISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HVRISDLGLA 175 (334)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~vkl~DFGla 175 (334)
-++..- +....+....+..++.|+..||..|-..+ |+|.||||+|||++... .+||||||.|
T Consensus 522 evLKKy-G~nvGL~ikaVRsYaqQLflALklLK~c~----------------vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 522 EVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLKKCG----------------VLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred HHHHHh-CcccceeehHHHHHHHHHHHHHHHHHhcC----------------eeecccCccceEeccCcceeeeccCccc
Confidence 443321 22223344445556679999999999999 99999999999999875 4799999999
Q ss_pred cccCCCCCCccccCcccccccc-ccccCC-cceeeh---hHHHHHcCCCCCCCCCCC
Q psy6542 176 CDFSKKKPHASVESDCILHGYI-KKLGGP-FVSAWQ---TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 176 ~~~~~~~~~~~~~t~~~~~~~v-~~~~~~-~~~~w~---~~~~~l~~~~~~~~~~~~ 227 (334)
-.........+.-+-.|-+||+ +...|. +-|.|+ |+||+ +++..-|.|..+
T Consensus 585 ~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYEl-YtGkIlFpG~TN 640 (752)
T KOG0670|consen 585 SFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYEL-YTGKILFPGRTN 640 (752)
T ss_pred cccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEe-eccceecCCCCc
Confidence 8776665555555667888887 555565 455666 55555 556655666653
No 405
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2.4e-17 Score=143.76 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=94.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-----CCCCcccccccceeeEEEEeecCC---e
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-----RNEPFKKCVLLFKMNLYKVTSEPN---S 83 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-----~h~~i~~~~~~~~v~~~~~~~~~~---~ 83 (334)
.|+...||. ++.++.. +||++...... ..+.+.+|+++++.+ .|||| +++|++++++. .
T Consensus 12 ~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nI--------vr~yg~~et~~g~g~ 78 (210)
T PRK10345 12 TGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGI--------PRYYGTVETDCGTGY 78 (210)
T ss_pred CCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCccc--------ceeeEEEEeCCCCeE
Confidence 577889995 7777766 69998864332 234678899999999 57999 99999999763 4
Q ss_pred EE-EEEEccC--CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHH-HHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCc
Q psy6542 84 HY-IIGVRQS--GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPV-HTCHSALNKNPLIAIFLTLSVPCLHFRDLKPAN 158 (334)
Q Consensus 84 ~~-ivmEy~~--g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L-~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~N 158 (334)
++ +||||+. ++ +..+.... .+.+. ..++.|++.++ .|||+++ |+||||||+|
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~--~~~e~-----~~~~~~~L~~l~~yLh~~~----------------IvhrDlKp~N 135 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC--RYEED-----VAQLRQLLKKLKRYLLDNR----------------IVTMELKPQN 135 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc--cccHh-----HHHHHHHHHHHHHHHHHCC----------------EeecCCCHHH
Confidence 34 7899943 55 55544332 23221 23455888888 9999999 9999999999
Q ss_pred eeeCCC----CCEEEEeccccc
Q psy6542 159 ILLDEH----GHVRISDLGLAC 176 (334)
Q Consensus 159 iLl~~~----~~vkl~DFGla~ 176 (334)
||++.. +.++|+||+-+.
T Consensus 136 ILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 136 ILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEeccCCCCCcEEEEECCCCc
Confidence 999743 379999955443
No 406
>KOG1163|consensus
Probab=99.74 E-value=9.7e-18 Score=144.18 Aligned_cols=184 Identities=13% Similarity=0.131 Sum_probs=132.8
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCC-cccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEP-FKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~-i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+|++-+|+|.+...|..||||+-+.... .-++..|..+...|+|.. | ..+..++.+..+-.+|||++
T Consensus 26 GSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~Gi--------P~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 26 GSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGI--------PHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred CchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCC--------chhhhhccccccceeeeecc
Confidence 5666789999999999999999875443 235667999999998754 6 77788888888999999999
Q ss_pred CCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC---CCEE
Q psy6542 92 SGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH---GHVR 168 (334)
Q Consensus 92 ~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~---~~vk 168 (334)
...++.+..-..+.+ ..+.++-++.|++.-++|+|.++ +|||||||+|+|+.-+ ..+.
T Consensus 94 GPsLEdLfnfC~R~f---tmkTvLMLaDQml~RiEyvH~r~----------------fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 94 GPSLEDLFNFCSRRF---TMKTVLMLADQMLSRIEYVHLRN----------------FIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred CccHHHHHHHHhhhh---hHHhHHHHHHHHHHHHHHHHhhc----------------cccccCCccceeeccccccceEE
Confidence 999766655555566 55666777889999999999999 9999999999999654 4589
Q ss_pred EEecccccccCCCCCCccc-----cCccccccccc-----cccCCcceee-hhHHHHHc--CCCCCCCCCCC
Q psy6542 169 ISDLGLACDFSKKKPHASV-----ESDCILHGYIK-----KLGGPFVSAW-QTRYAKLF--PNRLELHPESG 227 (334)
Q Consensus 169 l~DFGla~~~~~~~~~~~~-----~t~~~~~~~v~-----~~~~~~~~~w-~~~~~~l~--~~~~~~~~~~~ 227 (334)
++|||||+.+.+..+.... ....+++-|.+ ...-+..||- ++-|.+|+ -+.+||.+...
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred EEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 9999999977655432211 12233333331 1122334444 44444443 46778887754
No 407
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.73 E-value=1.3e-17 Score=146.30 Aligned_cols=131 Identities=11% Similarity=0.085 Sum_probs=98.6
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhh------HHHHHHHHHhcCCCCcccccccceeeEEEEeec----
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKW------RPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE---- 80 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~------~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~---- 80 (334)
.++..+||++.. ++..+|||+++.... ....... +.+|+..+.++.|++| ....+++..
T Consensus 41 ~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI--------~~~~d~~~~~~~~ 110 (232)
T PRK10359 41 NIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGL--------ASLNDFYLLAERK 110 (232)
T ss_pred CCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCC--------CcceEeeeecccc
Confidence 477889999755 477899999986554 2222223 5789999999999999 666665442
Q ss_pred ----CCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC
Q psy6542 81 ----PNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK 155 (334)
Q Consensus 81 ----~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK 155 (334)
.+..++||||++|. +..+. .. .. ....+++.+|..+|+.+ ++|||+|
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~-----~~---~~----~~~~~i~~~l~~lH~~g----------------i~H~Dik 162 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMP-----EI---SE----DVKAKIKASIESLHQHG----------------MVSGDPH 162 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhh-----hc---cH----HHHHHHHHHHHHHHHcC----------------CccCCCC
Confidence 34689999999998 42221 11 11 12349999999999999 9999999
Q ss_pred CCceeeCCCCCEEEEecccccccCCC
Q psy6542 156 PANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 156 p~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
|+||+++++| ++|+|||........
T Consensus 163 p~Nili~~~g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 163 KGNFIVSKNG-LRIIDLSGKRCTAQR 187 (232)
T ss_pred hHHEEEeCCC-EEEEECCCcccccch
Confidence 9999999988 999999988765433
No 408
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=6.9e-17 Score=139.24 Aligned_cols=129 Identities=15% Similarity=-0.006 Sum_probs=98.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhcCC-CCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHLRN-EPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l~h-~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+|.++..|+.+.. .+..++.+.+..... .......+.+|+++|++|.| +++ ++++++ +..|++
T Consensus 11 ~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~v--------P~ll~~----~~~~lv 76 (218)
T PRK12274 11 KSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRT--------PRLLHW----DGRHLD 76 (218)
T ss_pred cCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCC--------CEEEEE----cCEEEE
Confidence 5778889997765 577888887776554 22233357889999999965 668 888875 457999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCC-CCCceeeCCCC
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDL-KPANILLDEHG 165 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDl-Kp~NiLl~~~~ 165 (334)
|||+.|. +.... .. .. ..++.|++.+|.++|++| |+|||| ||+|||++.++
T Consensus 77 meyI~G~~L~~~~-------~~-~~---~~~~~qi~~~L~~lH~~G----------------IvHrDL~kp~NILv~~~g 129 (218)
T PRK12274 77 RSYLAGAAMYQRP-------PR-GD---LAYFRAARRLLQQLHRCG----------------VAHNDLAKEANWLVQEDG 129 (218)
T ss_pred EeeecCccHHhhh-------hh-hh---HHHHHHHHHHHHHHHHCc----------------CccCCCCCcceEEEcCCC
Confidence 9999988 42110 00 11 234559999999999999 999999 79999999999
Q ss_pred CEEEEecccccccCC
Q psy6542 166 HVRISDLGLACDFSK 180 (334)
Q Consensus 166 ~vkl~DFGla~~~~~ 180 (334)
.++|+|||+|.....
T Consensus 130 ~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 130 SPAVIDFQLAVRGNP 144 (218)
T ss_pred CEEEEECCCceecCC
Confidence 999999999985443
No 409
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.70 E-value=9.5e-18 Score=173.96 Aligned_cols=131 Identities=8% Similarity=-0.018 Sum_probs=87.0
Q ss_pred eeEEEEee-------cCCeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcC
Q psy6542 72 MNLYKVTS-------EPNSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTL 144 (334)
Q Consensus 72 v~~~~~~~-------~~~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~ 144 (334)
.++++++. ....++.+|||+++++..++...... .....++.++.||+.||.|||+++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~---~~~~~~~~i~~qi~~al~~lH~~g------------ 100 (793)
T PLN00181 36 RSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRS---VDAFECFHVFRQIVEIVNAAHSQG------------ 100 (793)
T ss_pred HHhhcccCCccccccccchhhhhhccCCccHHHHHhccccc---ccHHHHHHHHHHHHHHHHHHHhCC------------
Confidence 67777762 33467888999988865444332222 355556677889999999999999
Q ss_pred CCCcEEeeCCCCCceeeCCC-------------------CCEEEEecccccccCCCC------------------CCccc
Q psy6542 145 SVPCLHFRDLKPANILLDEH-------------------GHVRISDLGLACDFSKKK------------------PHASV 187 (334)
Q Consensus 145 ~~~~iiHrDlKp~NiLl~~~-------------------~~vkl~DFGla~~~~~~~------------------~~~~~ 187 (334)
|+||||||+|||++.. +.+|++|||+++...... .....
T Consensus 101 ----IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (793)
T PLN00181 101 ----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAM 176 (793)
T ss_pred ----eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccC
Confidence 9999999999999654 445666666665321100 01135
Q ss_pred cCcccccccccc-c-cCCcceeeh---hHHHHHcCCCCCC
Q psy6542 188 ESDCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 188 ~t~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
||+.|++||+.. . .+..+|+|+ ++||++. +.+|+
T Consensus 177 gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~-~~~~~ 215 (793)
T PLN00181 177 EMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC-PVSSR 215 (793)
T ss_pred CCcceEChhhhccCCCCchhhhhhHHHHHHHHhh-CCCch
Confidence 788899999842 2 345677777 6666654 44443
No 410
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=1.7e-16 Score=141.36 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=98.9
Q ss_pred CCCceEEEece-eCCCCCcEEEEEeeCCCcc----------------------hHHhhhHHHHHHHHHhcCCCCcccccc
Q psy6542 12 RVSKWRVKPPS-LKPLGFPIQIGMLRHRPHE----------------------SRVAKWRPYIQEIFNHLRNEPFKKCVL 68 (334)
Q Consensus 12 ~~~~~~V~~a~-~~~~~~~vAIK~l~~~~~~----------------------~~~~~~~~~E~~il~~l~h~~i~~~~~ 68 (334)
.++...||+|. +..+|+.||||+++....+ ......+..|+++++.+.+..+
T Consensus 38 ~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i----- 112 (237)
T smart00090 38 TGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGV----- 112 (237)
T ss_pred cCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 45677999998 7789999999999865321 0012345689999999986432
Q ss_pred cceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCC
Q psy6542 69 LFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVP 147 (334)
Q Consensus 69 ~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~ 147 (334)
...+.++. ...++||||++|+ +....... ... .......++.|++.+|.+||+.+.
T Consensus 113 -~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~---~~~~~~~i~~qi~~~l~~LH~~g~-------------- 169 (237)
T smart00090 113 -PVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEP---EEEEEFELYDDILEEMRKLYKEGE-------------- 169 (237)
T ss_pred -CCCeeeEe----cCceEEEEEecCCccccccccc-CCc---chHHHHHHHHHHHHHHHHHHhcCC--------------
Confidence 00344432 2358999999997 32221111 111 233345667799999999999862
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
++||||||+||+++ ++.++|+|||+|......
T Consensus 170 -iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 170 -LVHGDLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred -EEeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 99999999999999 789999999998755544
No 411
>KOG1165|consensus
Probab=99.70 E-value=3e-16 Score=140.62 Aligned_cols=186 Identities=15% Similarity=0.108 Sum_probs=140.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
.+|++-++.+.+.-+|++||||.-...... -++..|....+.|. .+.| .+.|-+...+.+-.+|||+
T Consensus 38 eGsFG~lf~G~Nl~nne~VAIKfEPrkS~A----PQLrdEYr~YKlL~g~~GI--------P~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 38 EGSFGVLFLGKNLYNNEPVAIKFEPRKSEA----PQLRDEYRTYKLLGGTEGI--------PQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred cCcceeeecccccccCceEEEEeccccCCc----chHHHHHHHHHHHcCCCCC--------Cceeeeccccchhhhhhhh
Confidence 478889999999999999999987654442 24556888888886 4678 8999899888889999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-----
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG----- 165 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~----- 165 (334)
+...++.+..-..+.| ..+.++.++.|++.-++|+|++. +|.|||||+|+||...+
T Consensus 106 LGPSLEDLFD~CgR~F---SvKTV~miA~Qmi~rie~vH~k~----------------LIYRDIKPdNFLIGrp~~k~~n 166 (449)
T KOG1165|consen 106 LGPSLEDLFDLCGRRF---SVKTVAMIAKQMITRIEYVHEKD----------------LIYRDIKPDNFLIGRPGTKDAN 166 (449)
T ss_pred hCcCHHHHHHHhcCcc---cHHhHHHHHHHHHHHHHHHHhcc----------------eeecccCccceeecCCCCCCCc
Confidence 9999777767666777 55666677789999999999999 99999999999997643
Q ss_pred CEEEEecccccccCCCCCCcc-----ccCcccccccc-----ccccCCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 166 HVRISDLGLACDFSKKKPHAS-----VESDCILHGYI-----KKLGGPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 166 ~vkl~DFGla~~~~~~~~~~~-----~~t~~~~~~~v-----~~~~~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
.+.++|||+|+...+..+... ..+..+++-|+ +...-+..||.- =+|.|+.-+.+||.|....
T Consensus 167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 489999999998866543211 12344444554 223334556655 4456666788899887654
No 412
>KOG1167|consensus
Probab=99.69 E-value=6.8e-17 Score=148.58 Aligned_cols=181 Identities=14% Similarity=0.091 Sum_probs=134.1
Q ss_pred CCCceEEEeceeCC---CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 12 RVSKWRVKPPSLKP---LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 12 ~~~~~~V~~a~~~~---~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
.+++--||+|.+.. ....||+|.+....... +..+|+++|..+. +.|| +++.+.+..++...+|
T Consensus 46 eGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----ri~~El~~L~~~gG~~ni--------~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 46 EGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----RILNELEMLYRLGGSDNI--------IKLNGCFRNNDQVAIV 113 (418)
T ss_pred ccchhhhhhhhHhhhccccceEeeeecccccCch----HHHHHHHHHHHhccchhh--------hcchhhhccCCeeEEE
Confidence 35556788888887 88899999999777643 3567999999986 6778 9999999999999999
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-C
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH-G 165 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~-~ 165 (334)
|||.++. ...+... + ....+..++..++.||.++|.+| |||||+||.|+|.+.. +
T Consensus 114 lp~~~H~~f~~l~~~----l---~~~~i~~Yl~~ll~Al~~~h~~G----------------IvHRDiKpsNFL~n~~t~ 170 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYRS----L---SLAEIRWYLRNLLKALAHLHKNG----------------IVHRDIKPSNFLYNRRTQ 170 (418)
T ss_pred ecccCccCHHHHHhc----C---CHHHHHHHHHHHHHHhhhhhccC----------------ccccCCCccccccccccC
Confidence 9999998 4333222 2 23344455669999999999999 9999999999999887 5
Q ss_pred CEEEEeccccccc-----------------CC--CC---------------------------CCccccCcccccccccc
Q psy6542 166 HVRISDLGLACDF-----------------SK--KK---------------------------PHASVESDCILHGYIKK 199 (334)
Q Consensus 166 ~vkl~DFGla~~~-----------------~~--~~---------------------------~~~~~~t~~~~~~~v~~ 199 (334)
.-.|+|||||... .. +. .....||+.+-+||++.
T Consensus 171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~ 250 (418)
T KOG1167|consen 171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF 250 (418)
T ss_pred CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh
Confidence 5789999999721 00 00 01235677778888853
Q ss_pred ---ccCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 200 ---LGGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 200 ---~~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
..++..|+|+ +++-.+.+...||+-..+
T Consensus 251 k~~~QttaiDiws~GVI~Lslls~~~PFf~a~d 283 (418)
T KOG1167|consen 251 RCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKD 283 (418)
T ss_pred hccCcCCccceeeccceeehhhccccccccCcc
Confidence 3467889999 444455566666655443
No 413
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=3.7e-16 Score=136.40 Aligned_cols=132 Identities=18% Similarity=0.129 Sum_probs=100.9
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc------chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH------ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~------~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
..++...||+|.. +|..|+||+...... .......+.+|++++..+.|+++ .....++...+..
T Consensus 5 ~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--------~~p~~~~~~~~~~ 74 (211)
T PRK14879 5 KRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGV--------NVPAVYFVDPENF 74 (211)
T ss_pred ccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCC--------CCCeEEEEeCCCC
Confidence 3577889999986 678899998765432 11123467789999999999987 5555555566778
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+++|||++|+ +..+.... . . ....++.+++.+|.++|+.+ ++|+|++|+||+++
T Consensus 75 ~lv~e~~~G~~L~~~~~~~----~---~-~~~~i~~~i~~~l~~lH~~~----------------i~H~Dl~p~Nil~~- 129 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN----G---M-EELELSREIGRLVGKLHSAG----------------IIHGDLTTSNMILS- 129 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc----c---H-HHHHHHHHHHHHHHHHHhCC----------------cccCCCCcccEEEE-
Confidence 9999999988 43332211 1 1 44566779999999999999 99999999999999
Q ss_pred CCCEEEEecccccc
Q psy6542 164 HGHVRISDLGLACD 177 (334)
Q Consensus 164 ~~~vkl~DFGla~~ 177 (334)
++.++|+|||+++.
T Consensus 130 ~~~~~liDf~~a~~ 143 (211)
T PRK14879 130 GGKIYLIDFGLAEF 143 (211)
T ss_pred CCCEEEEECCcccC
Confidence 78899999999865
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.69 E-value=9.2e-16 Score=139.27 Aligned_cols=187 Identities=19% Similarity=0.187 Sum_probs=139.2
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchH-HhhhHHHHHHHHHhcCCC-CcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESR-VAKWRPYIQEIFNHLRNE-PFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~-~~~~~~~E~~il~~l~h~-~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.++...||++.+. ..+|+|.+........ ....+.+|..++..+.|+ ++ +.+++.+......+++++
T Consensus 10 ~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 10 EGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI--------VKLYDFFQDEGSLYLVME 78 (384)
T ss_pred CCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcce--------eeEEEEEecCCEEEEEEe
Confidence 4556889999888 7899999998766442 566788899999999999 69 999999988888999999
Q ss_pred ccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CE
Q psy6542 90 RQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HV 167 (334)
Q Consensus 90 y~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~v 167 (334)
|+.|+ +..+....... ..........++.|++.++.|+|+.+ ++|||+||+||+++..+ .+
T Consensus 79 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~----------------~~hrd~kp~nil~~~~~~~~ 141 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG----------------IIHRDIKPENILLDRDGRVV 141 (384)
T ss_pred cCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC----------------eeccCCCHHHeeecCCCCeE
Confidence 99998 43222221100 12244455566779999999999999 99999999999999998 69
Q ss_pred EEEecccccccCCCC--------CCccccCccccccccccc----cCC-cceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKKK--------PHASVESDCILHGYIKKL----GGP-FVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 168 kl~DFGla~~~~~~~--------~~~~~~t~~~~~~~v~~~----~~~-~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
+++|||+++.+.... .....|+..|++|+.... .+. ..|.|+ +....+..+..|+....
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 142 KLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215 (384)
T ss_pred EEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999998665443 245678999999997532 344 555554 34444555565655544
No 415
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.8e-16 Score=136.15 Aligned_cols=135 Identities=15% Similarity=0.009 Sum_probs=98.7
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcch--------------------HHhhhHHHHHHHHHhcCCCCcccccccc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHES--------------------RVAKWRPYIQEIFNHLRNEPFKKCVLLF 70 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~--------------------~~~~~~~~E~~il~~l~h~~i~~~~~~~ 70 (334)
..++.++||++... +|+.||||+++...... ........|..++..+.|+++ .
T Consensus 24 ~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i------~ 96 (198)
T cd05144 24 GVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF------P 96 (198)
T ss_pred ccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC------C
Confidence 46777899999875 79999999987643100 011235678999999988753 0
Q ss_pred eeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcE
Q psy6542 71 KMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCL 149 (334)
Q Consensus 71 ~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~i 149 (334)
+...++ ....++||||++|+ +..+... .....++.+++.++.++|+.+ +
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~g----------------i 146 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHG----------------I 146 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCC----------------C
Confidence 144443 24568999999998 4322110 112345569999999999999 9
Q ss_pred EeeCCCCCceeeCCCCCEEEEecccccccCCCC
Q psy6542 150 HFRDLKPANILLDEHGHVRISDLGLACDFSKKK 182 (334)
Q Consensus 150 iHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~ 182 (334)
+||||||+||+++.++.++|+|||+|.......
T Consensus 147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~ 179 (198)
T cd05144 147 IHGDLSEFNILVDDDEKIYIIDWPQMVSTDHPN 179 (198)
T ss_pred CcCCCCcccEEEcCCCcEEEEECCccccCCCcc
Confidence 999999999999999999999999997666543
No 416
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=5.6e-16 Score=134.05 Aligned_cols=130 Identities=13% Similarity=0.079 Sum_probs=96.4
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc--c----hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH--E----SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~--~----~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
.+++.+.||++. .+|..|++|....... + .....++.+|+++++.++|+++ ....-++...+..
T Consensus 3 g~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--------~~p~~~~~~~~~~ 72 (199)
T TIGR03724 3 AKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV--------NTPVVYDVDPDNK 72 (199)
T ss_pred CCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC--------CCCEEEEEECCCC
Confidence 367889999998 4678999999664332 1 1123467789999999999875 3222233455667
Q ss_pred EEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 85 YIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 85 ~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
++||||++|+ +..+.... .. .++.|++.+|.+||+.+ ++|+|++|+||+++
T Consensus 73 ~lv~e~~~g~~l~~~~~~~-------~~----~~~~~i~~~l~~lH~~g----------------i~H~Dl~~~Nil~~- 124 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEG-------ND----ELLREIGRLVGKLHKAG----------------IVHGDLTTSNIIVR- 124 (199)
T ss_pred EEEEEEECCccHHHHHhhc-------HH----HHHHHHHHHHHHHHHCC----------------eecCCCCcceEEEE-
Confidence 8999999988 32221111 00 45669999999999999 99999999999999
Q ss_pred CCCEEEEeccccccc
Q psy6542 164 HGHVRISDLGLACDF 178 (334)
Q Consensus 164 ~~~vkl~DFGla~~~ 178 (334)
++.++++|||+++..
T Consensus 125 ~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 125 DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCcEEEEECCCCcCC
Confidence 789999999998753
No 417
>KOG0603|consensus
Probab=99.67 E-value=1.7e-17 Score=159.60 Aligned_cols=214 Identities=16% Similarity=0.171 Sum_probs=158.8
Q ss_pred eceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEccCCChhHH
Q psy6542 20 PPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGPKDQI 98 (334)
Q Consensus 20 ~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~l~~l 98 (334)
++.....|..+|+|++++.........+...|-.++..++ ||.+ |+++..++.+..+|++++|..|+..+.
T Consensus 15 k~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~--------v~lhyafqt~~kl~l~ld~~rgg~lft 86 (612)
T KOG0603|consen 15 KAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFL--------VKLHYAFQTDGKLYLILDFLRGGDLFT 86 (612)
T ss_pred HhccccccchhhhhcccccccccccccccccHHHHHhhccCCCce--------eeeeeeeccccchhHhhhhcccchhhh
Confidence 4445678899999999988763333446667899999998 8889 999999999999999999999984444
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccccc
Q psy6542 99 SRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDF 178 (334)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~ 178 (334)
.......+.+...+.+.. +++.+++.+|+.+ ++|||+|++||+++.+|++++.|||+.+..
T Consensus 87 ~l~~~~~f~~~~~~~~~a---elaLald~lh~l~----------------iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 87 RLSKEVMFDELDVAFYLA---ELALALDHLHKLG----------------IAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred ccccCCchHHHHHHHHHH---HHHHHHhhcchhH----------------HHHhcccccceeecccCccccCCchhhhHh
Confidence 344444555555555544 9999999999999 999999999999999999999999999976
Q ss_pred CCCCCCccccCccccccccccccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccccccccHhHHHH
Q psy6542 179 SKKKPHASVESDCILHGYIKKLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQC 254 (334)
Q Consensus 179 ~~~~~~~~~~t~~~~~~~v~~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 254 (334)
-..... |||..||+||+.. ++..+.||| +.|+++. +..||.++ ....|....+ ..+..++. .+...
T Consensus 148 v~~~~~--cgt~eymApEI~~-gh~~a~D~ws~gvl~fellt-g~~pf~~~----~~~~Il~~~~-~~p~~l~~-~a~~~ 217 (612)
T KOG0603|consen 148 VKEKIA--CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLT-GTLPFGGD----TMKRILKAEL-EMPRELSA-EARSL 217 (612)
T ss_pred Hhhhhc--ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhh-CCCCCchH----HHHHHhhhcc-CCchhhhH-HHHHH
Confidence 555433 8999999999977 888899999 4677755 45566551 1222222122 23333332 34455
Q ss_pred HHHhhccCchhhcCCC
Q psy6542 255 VQLKLTRDTRIVLTNP 270 (334)
Q Consensus 255 i~~~~~~~p~~r~~~~ 270 (334)
+.....++|..|+...
T Consensus 218 ~~~l~~r~p~nrLg~~ 233 (612)
T KOG0603|consen 218 FRQLFKRNPENRLGAG 233 (612)
T ss_pred HHHHHhhCHHHHhccC
Confidence 5555577888888764
No 418
>KOG0590|consensus
Probab=99.64 E-value=7.8e-17 Score=160.54 Aligned_cols=182 Identities=20% Similarity=0.162 Sum_probs=128.9
Q ss_pred EEEeceeCCCCCcEEEEEee----CCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 17 RVKPPSLKPLGFPIQIGMLR----HRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~----~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
.|+.+.....+..++.|..+ ....+......+..|+.+-..++|+|+ +.....+.+....+-+||||+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~--------~e~l~~~~~~~~~~~~mE~~~ 404 (601)
T KOG0590|consen 333 SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNI--------IETLDIVQEIDGILQSMEYCP 404 (601)
T ss_pred ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCch--------hhhHHHHhhcccchhhhhccc
Confidence 46666666666666666554 222233333346778888999999998 665555555555555699999
Q ss_pred CChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 93 GPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 93 g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
+++--+.... ..+......+++. |++.|+.|+|+.| |.|||+||+|+++..+|.+||+||
T Consensus 405 ~Dlf~~~~~~-~~~~~~e~~c~fK---qL~~Gv~y~h~~G----------------iahrdlK~enll~~~~g~lki~Df 464 (601)
T KOG0590|consen 405 YDLFSLVMSN-GKLTPLEADCFFK---QLLRGVKYLHSMG----------------LAHRDLKLENLLVTENGILKIIDF 464 (601)
T ss_pred HHHHHHHhcc-cccchhhhhHHHH---HHHHHHHHHHhcC----------------ceeccCccccEEEecCCceEEeec
Confidence 9521122221 2445556666666 9999999999999 999999999999999999999999
Q ss_pred ccccccCCCC------CCccccCccccccccc---cccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 173 GLACDFSKKK------PHASVESDCILHGYIK---KLGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 173 Gla~~~~~~~------~~~~~~t~~~~~~~v~---~~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
|.+..+.... ....+|+..|++||+. .....+.|+|+ ++|..|..++.||....
T Consensus 465 g~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~ 529 (601)
T KOG0590|consen 465 GAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAK 529 (601)
T ss_pred CcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccc
Confidence 9998664433 3456788889999984 33355788888 56667777788876554
No 419
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=3.8e-15 Score=147.96 Aligned_cols=129 Identities=14% Similarity=0.079 Sum_probs=95.5
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCC--Cc----chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEE
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHR--PH----ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~--~~----~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ 85 (334)
+++...||++..... .+++|..... .. ......++.+|+++++.++|+++ +....+..+....+
T Consensus 343 ~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--------~~p~~~~~~~~~~~ 412 (535)
T PRK09605 343 KGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGV--------PTPVIYDVDPEEKT 412 (535)
T ss_pred cCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCC--------CeeEEEEEeCCCCE
Confidence 667789999876543 3444443221 11 11233567889999999999998 66666666667789
Q ss_pred EEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC
Q psy6542 86 IIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH 164 (334)
Q Consensus 86 ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~ 164 (334)
+||||++|+ +..... ....++.|++.+|.|||+.+ ++|||+||+|||+ ++
T Consensus 413 lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g----------------iiHrDlkp~NILl-~~ 463 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG----------------IVHGDLTTSNFIV-RD 463 (535)
T ss_pred EEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC----------------CccCCCChHHEEE-EC
Confidence 999999998 422211 12345669999999999999 9999999999999 67
Q ss_pred CCEEEEecccccccC
Q psy6542 165 GHVRISDLGLACDFS 179 (334)
Q Consensus 165 ~~vkl~DFGla~~~~ 179 (334)
+.++|+|||+++...
T Consensus 464 ~~~~liDFGla~~~~ 478 (535)
T PRK09605 464 DRLYLIDFGLGKYSD 478 (535)
T ss_pred CcEEEEeCcccccCC
Confidence 889999999997643
No 420
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=3.4e-15 Score=127.80 Aligned_cols=138 Identities=19% Similarity=0.100 Sum_probs=93.7
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhh----------------------hHHHHHHHHHhcCCCCcccccc
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAK----------------------WRPYIQEIFNHLRNEPFKKCVL 68 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~----------------------~~~~E~~il~~l~h~~i~~~~~ 68 (334)
..++...||+|.+. +|+.||||+++.......... ....|.+.+..+.+..+
T Consensus 6 g~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~----- 79 (187)
T cd05119 6 GTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV----- 79 (187)
T ss_pred ccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC-----
Confidence 35788899999987 799999999886543111111 11356666666655432
Q ss_pred cceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCC
Q psy6542 69 LFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSV 146 (334)
Q Consensus 69 ~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~ 146 (334)
.+.+.+.. ...++||||++|+ ........ ... ......++.|++.++.++|. .+
T Consensus 80 -~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~--~~~~~~~~~~~~~~l~~lh~~~~-------------- 135 (187)
T cd05119 80 -PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRL--LEDPEELYDQILELMRKLYREAG-------------- 135 (187)
T ss_pred -CCCceEec----CCCEEEEEEeCCCCccChhhhh---hhh--cccHHHHHHHHHHHHHHHhhccC--------------
Confidence 01344433 2358999999995 11100111 111 03345666799999999999 88
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
|+||||||+||+++ ++.++|+|||.+......
T Consensus 136 --ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~~ 167 (187)
T cd05119 136 --LVHGDLSEYNILVD-DGKVYIIDVPQAVEIDHP 167 (187)
T ss_pred --cCcCCCChhhEEEE-CCcEEEEECcccccccCc
Confidence 99999999999999 899999999999766553
No 421
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.59 E-value=1.3e-14 Score=129.46 Aligned_cols=133 Identities=16% Similarity=0.105 Sum_probs=92.5
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-----------chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-----------ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS 79 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-----------~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~ 79 (334)
.|++.|+|+.. +..++||....... +.....++.+|++++..|+|+++ .++..+++..
T Consensus 44 g~gtv~~v~~~-----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi------~vP~pl~~~~ 112 (239)
T PRK01723 44 GRGTTWFVQTP-----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGL------PVPRPIAARV 112 (239)
T ss_pred CCccEEEEEeC-----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCC------CCceeEeeee
Confidence 46677777664 67899998864221 11233567889999999999875 0144444433
Q ss_pred c-CC---eEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 80 E-PN---SHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 80 ~-~~---~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
. .. ..++||||++|+ +..+.... .+ ... .+.|++.+|.+||++| |+|||
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l---~~~----~~~~i~~~l~~lH~~G----------------I~HrD 167 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA--PL---SEE----QWQAIGQLIARFHDAG----------------VYHAD 167 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC--CC---CHH----HHHHHHHHHHHHHHCC----------------CCCCC
Confidence 2 22 235999999984 43332221 11 122 1348999999999999 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFS 179 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~ 179 (334)
|||+|||++.++.++|+|||.++...
T Consensus 168 lkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 168 LNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred CCchhEEEcCCCCEEEEECCCcccCC
Confidence 99999999999999999999987543
No 422
>KOG1290|consensus
Probab=99.56 E-value=1.2e-14 Score=135.94 Aligned_cols=126 Identities=13% Similarity=0.020 Sum_probs=95.5
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCC--CcccccccceeeEEEEee----cCCeEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNE--PFKKCVLLFKMNLYKVTS----EPNSHYI 86 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~--~i~~~~~~~~v~~~~~~~----~~~~~~i 86 (334)
+-+=-||+|++..+.+.||+|+.+...+ ..+....|+.+|++++.. +- ..--.+|+++|.|. .+.++||
T Consensus 89 GHFSTVWLawDtq~~r~VAlKVvKSAqh---YtEaAlDEIklL~~v~~~Dp~~--~~~~~VV~LlD~FkhsGpNG~HVCM 163 (590)
T KOG1290|consen 89 GHFSTVWLAWDTQNKRYVALKVVKSAQH---YTEAALDEIKLLQQVREGDPND--PGKKCVVQLLDHFKHSGPNGQHVCM 163 (590)
T ss_pred cccceeEEEeeccCCeEEEEEEEehhhH---HHHHHHHHHHHHHHHHhcCCCC--CCCceeeeeeccceecCCCCcEEEE
Confidence 3344799999999999999999997665 223344599999987521 11 00012399999988 4568999
Q ss_pred EEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 87 IGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 87 vmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
|+|++... +..|+.+..+.. +...+..|+.|++.||.|||.+. .|||-||||+|||+
T Consensus 164 VfEvLGdnLLklI~~s~YrGl---pl~~VK~I~~qvL~GLdYLH~ec---------------gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 164 VFEVLGDNLLKLIKYSNYRGL---PLSCVKEICRQVLTGLDYLHREC---------------GIIHTDLKPENVLL 221 (590)
T ss_pred EehhhhhHHHHHHHHhCCCCC---cHHHHHHHHHHHHHHHHHHHHhc---------------CccccCCCcceeee
Confidence 99999988 556666555444 66677788889999999999865 19999999999999
No 423
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=3.7e-14 Score=115.71 Aligned_cols=129 Identities=20% Similarity=0.115 Sum_probs=99.3
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCC--CcccccccceeeEEEEeecCCeEEEEE
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNE--PFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~--~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
..++...||++.... ..++||....... ...+.+|+.+++.++|. ++ ++++.+...++..|++|
T Consensus 7 ~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~--------p~~~~~~~~~~~~~~v~ 72 (155)
T cd05120 7 KGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPV--------PKVLASGESDGWSYLLM 72 (155)
T ss_pred ccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCC--------CeEEEEcCCCCccEEEE
Confidence 456677888888754 7899999875443 34577899999999874 67 88888888888899999
Q ss_pred EccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
||+.|+ +..+ .......++.+++.+|.++|.... +.++|+|++|+||++++.+.+
T Consensus 73 e~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~-------------~~i~H~Dl~~~Nil~~~~~~~ 128 (155)
T cd05120 73 EWIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPL-------------LVLCHGDLHPGNILVDDGKIL 128 (155)
T ss_pred EecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCc-------------eEEEecCCCcceEEEECCcEE
Confidence 999988 3211 111122345589999999998531 129999999999999998999
Q ss_pred EEEecccccc
Q psy6542 168 RISDLGLACD 177 (334)
Q Consensus 168 kl~DFGla~~ 177 (334)
+++|||+++.
T Consensus 129 ~l~Df~~~~~ 138 (155)
T cd05120 129 GIIDWEYAGY 138 (155)
T ss_pred EEEecccccC
Confidence 9999999864
No 424
>KOG4158|consensus
Probab=99.55 E-value=2.2e-14 Score=131.56 Aligned_cols=165 Identities=18% Similarity=0.139 Sum_probs=106.0
Q ss_pred CeEEEEEEccCCChhH-HhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 82 NSHYIIGVRQSGPKDQ-ISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 82 ~~~~ivmEy~~g~l~~-l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
..+|+||.-.+..+.. +..+. . ......-++.|+++|+.|||.+| |.|||+|.+|||
T Consensus 316 ~tlylvMkrY~~tLr~yl~~~~---~---s~r~~~~~laQlLEav~hL~~hg----------------vAhRDlKSDNiL 373 (598)
T KOG4158|consen 316 KTLYLVMKRYRQTLREYLWTRH---R---SYRTGRVILAQLLEAVTHLHKHG----------------VAHRDLKSDNIL 373 (598)
T ss_pred ceEEEehhcchhhHHHHHhcCC---C---chHHHHHHHHHHHHHHHHHHHcc----------------chhhcccccceE
Confidence 3579999866666432 32222 1 12222345679999999999999 999999999999
Q ss_pred e--CCCC--CEEEEecccccccCCCC--------CCccccCccccccccc--------cccCCcceeeh---hHHHHHcC
Q psy6542 161 L--DEHG--HVRISDLGLACDFSKKK--------PHASVESDCILHGYIK--------KLGGPFVSAWQ---TRYAKLFP 217 (334)
Q Consensus 161 l--~~~~--~vkl~DFGla~~~~~~~--------~~~~~~t~~~~~~~v~--------~~~~~~~~~w~---~~~~~l~~ 217 (334)
+ ++|+ .+.|+|||.|-.-.... ....-|..+.|+||+. ...|..+|.|. +.||. ++
T Consensus 374 ~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEI-fg 452 (598)
T KOG4158|consen 374 LELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEI-FG 452 (598)
T ss_pred EEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHH-hc
Confidence 9 4443 37899999885332211 1122346778999983 34478899999 66666 55
Q ss_pred CCCCCCCCCCCCcccc-hhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 218 NRLELHPESGQSKPEL-IFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 218 ~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
..-||++....-...- ....++...+ +..+....+.+...+.+||.+|....
T Consensus 453 ~~NPFY~rGem~L~~r~Yqe~qLPalp-~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 453 RSNPFYKRGEMLLDTRTYQESQLPALP-SRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred cCCcccccchheechhhhhhhhCCCCc-ccCChHHHHHHHHHhcCCccccCCcc
Confidence 6668888543221111 2222333333 44444567777778889999998865
No 425
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.47 E-value=4.3e-13 Score=121.39 Aligned_cols=201 Identities=15% Similarity=0.136 Sum_probs=112.1
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCC---CCc----ccccccce-eeE------E
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRN---EPF----KKCVLLFK-MNL------Y 75 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h---~~i----~~~~~~~~-v~~------~ 75 (334)
..++...||.+.+.+||+.+|+|+...... ....-+.+.+|.-....+.+ |.- -+.+.++. +++ +
T Consensus 21 ~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~ 100 (288)
T PF14531_consen 21 GKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFF 100 (288)
T ss_dssp EEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEE
T ss_pred ccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcce
Confidence 345677999999999999999999776554 22223344444433333332 110 01111111 111 1
Q ss_pred EEeecCC-----eEEEEEEccCCChhHHhhh---hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCC
Q psy6542 76 KVTSEPN-----SHYIIGVRQSGPKDQISRS---KINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVP 147 (334)
Q Consensus 76 ~~~~~~~-----~~~ivmEy~~g~l~~l~~~---~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~ 147 (334)
..-...+ ..+++|.-+.+++..+... ............-+.+..|++..+++||+.|
T Consensus 101 ~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--------------- 165 (288)
T PF14531_consen 101 ERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--------------- 165 (288)
T ss_dssp EECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---------------
T ss_pred ecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---------------
Confidence 1111111 2377888888885443221 1111111111222344579999999999999
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEecccccccCCCCCCccccCccccccccccc---------cCCc-ceeeh--hHHHHH
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVESDCILHGYIKKL---------GGPF-VSAWQ--TRYAKL 215 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~~~~~~v~~~---------~~~~-~~~w~--~~~~~l 215 (334)
++|+||||+|++++.+|.+.|+||+.....+..... ...+..+.|||+... .++. .|.|. ++.+.+
T Consensus 166 -lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 166 -LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp -EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred -eEecccceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 999999999999999999999999988766665443 333567889997422 1344 45555 666666
Q ss_pred cCCCCCCCCCCCC
Q psy6542 216 FPNRLELHPESGQ 228 (334)
Q Consensus 216 ~~~~~~~~~~~~~ 228 (334)
.++.+||......
T Consensus 244 WC~~lPf~~~~~~ 256 (288)
T PF14531_consen 244 WCGRLPFGLSSPE 256 (288)
T ss_dssp HHSS-STCCCGGG
T ss_pred HHccCCCCCCCcc
Confidence 7778888655433
No 426
>KOG0606|consensus
Probab=99.44 E-value=9.6e-14 Score=140.33 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=102.3
Q ss_pred HHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCC-----------------C
Q psy6542 120 QLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------K 182 (334)
Q Consensus 120 qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~-----------------~ 182 (334)
+++.+++|||+-+ |+|||+||+|.||..-|++|++|||+.+...+. .
T Consensus 151 dmvla~Eylh~yg----------------ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~ 214 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYG----------------IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQ 214 (1205)
T ss_pred hhhHHhHhhccCC----------------eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhh
Confidence 4588999999999 999999999999999999999999998744222 1
Q ss_pred CCccccCcccccccc-ccccCCcceeeh----hHHHHHcCCCCCCCCCCCCCcccchhcccccccccccccH-hHHHHHH
Q psy6542 183 PHASVESDCILHGYI-KKLGGPFVSAWQ----TRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDLITV-KGEQCVQ 256 (334)
Q Consensus 183 ~~~~~~t~~~~~~~v-~~~~~~~~~~w~----~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i~ 256 (334)
....+||+.|.+|+| ..+||.+..||| ++|+++.+ .+||+++....++..++.+.+.....+.... .....+.
T Consensus 215 dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVg-cvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~ 293 (1205)
T KOG0606|consen 215 DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG-CVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIE 293 (1205)
T ss_pred hccccCCccccChhhhhhhccCCCccHHHHHHHHHHHhee-eeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHH
Confidence 345689999999998 678899999999 56666554 5588898877778777777665333332222 4555666
Q ss_pred HhhccCchhhcCCC
Q psy6542 257 LKLTRDTRIVLTNP 270 (334)
Q Consensus 257 ~~~~~~p~~r~~~~ 270 (334)
..+..+|..|+...
T Consensus 294 ~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 294 QLLRQNPLCRLGTG 307 (1205)
T ss_pred HHHHhChHhhcccc
Confidence 66677888887754
No 427
>KOG1024|consensus
Probab=99.41 E-value=5.3e-13 Score=122.16 Aligned_cols=186 Identities=9% Similarity=0.049 Sum_probs=130.4
Q ss_pred CCCceEEEeceeCC-----CCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC-CeEE
Q psy6542 12 RVSKWRVKPPSLKP-----LGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP-NSHY 85 (334)
Q Consensus 12 ~~~~~~V~~a~~~~-----~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~-~~~~ 85 (334)
+|-+++||.+.-++ ..+.|-+|.++....+-. ...+..|.-++..+.|||+ ..+.++..++ ...+
T Consensus 294 EGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQ-v~~~L~es~lly~~sH~nl--------l~V~~V~ie~~~~P~ 364 (563)
T KOG1024|consen 294 EGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQ-VNLLLQESMLLYGASHPNL--------LSVLGVSIEDYATPF 364 (563)
T ss_pred cCchhheeeeeecccCCcchHHHHHHHHHHhcccHHH-HHHHHHHHHHHhcCcCCCc--------cceeEEEeeccCcce
Confidence 46778898884332 334566777765444322 2356778889999999999 8888877644 4566
Q ss_pred EEEEccCCC-h-hHHhhhhh---hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 86 IIGVRQSGP-K-DQISRSKI---NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 86 ivmEy~~g~-l-~~l~~~~~---~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
+++.++.-| + .++...+. +.-......++..++.|++.|+.|||..+ +||.||...|++
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~----------------ViHkDiAaRNCv 428 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG----------------VIHKDIAARNCV 428 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC----------------cccchhhhhcce
Confidence 667777665 3 33322211 11122244556778889999999999999 999999999999
Q ss_pred eCCCCCEEEEecccccccCCCCCCcc----ccCccccccccc--cccCCcceeeh---hHHHHHcCCCCCC
Q psy6542 161 LDEHGHVRISDLGLACDFSKKKPHAS----VESDCILHGYIK--KLGGPFVSAWQ---TRYAKLFPNRLEL 222 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~~~~~~~~~~----~~t~~~~~~~v~--~~~~~~~~~w~---~~~~~l~~~~~~~ 222 (334)
|++.-.|||+|=.|+|.+=....+.- .....+|++|.. ..+...+|+|+ ++||++..+..|+
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Py 499 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPY 499 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCc
Confidence 99999999999999996644432211 124567888863 44566777787 8999999988875
No 428
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.38 E-value=6.8e-13 Score=130.23 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=86.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcc--------------------------------hHHhhh------HHHHH
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHE--------------------------------SRVAKW------RPYIQ 52 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~--------------------------------~~~~~~------~~~E~ 52 (334)
..+|-.+||+|..+.+|+.||||++++.-.+ ....+. +.+|+
T Consensus 128 asaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea 207 (537)
T PRK04750 128 ASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREA 207 (537)
T ss_pred cCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence 3578889999999999999999999865210 011222 33344
Q ss_pred HHHHhcC----CCCcccccccceeeEEEEeec-CCeEEEEEEccCCC-hhHHhh-hhhh-hhhHHHHHHHHHHHHHHHHH
Q psy6542 53 EIFNHLR----NEPFKKCVLLFKMNLYKVTSE-PNSHYIIGVRQSGP-KDQISR-SKIN-RYHKKLRKCFIRRTVQLLEP 124 (334)
Q Consensus 53 ~il~~l~----h~~i~~~~~~~~v~~~~~~~~-~~~~~ivmEy~~g~-l~~l~~-~~~~-~~~~~~~~~~~~i~~qi~~~ 124 (334)
..+.+++ +.+. +.+-.++.+ ....++||||++|+ +..+.. ...+ .........+..++.|+.
T Consensus 208 ~N~~~~~~~f~~~~~--------v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-- 277 (537)
T PRK04750 208 ANASQLRRNFEDSDM--------LYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-- 277 (537)
T ss_pred HHHHHHHHHccCCCC--------eecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH--
Confidence 4444432 3333 333333332 34568999999998 322211 1111 011112222223334554
Q ss_pred HHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC----CEEEEecccccccCCC
Q psy6542 125 VHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG----HVRISDLGLACDFSKK 181 (334)
Q Consensus 125 L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~----~vkl~DFGla~~~~~~ 181 (334)
..| ++|+|+||.||+++.+| .++++|||++..++..
T Consensus 278 -----~~G----------------ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 278 -----RDG----------------FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -----hCC----------------eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 477 99999999999999988 9999999999877654
No 429
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=5.2e-12 Score=122.18 Aligned_cols=140 Identities=18% Similarity=0.155 Sum_probs=87.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchH--------------------------------Hhh------hHHHHHH
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESR--------------------------------VAK------WRPYIQE 53 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~--------------------------------~~~------~~~~E~~ 53 (334)
.+|-.+||+|..+ +|+.||||+.++.-.+.. ... .+.+|+.
T Consensus 127 saSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~ 205 (437)
T TIGR01982 127 AASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAA 205 (437)
T ss_pred eeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHH
Confidence 4677899999876 599999999986532100 000 2444555
Q ss_pred HHHhcC----CCCcccccccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHH-HHHH
Q psy6542 54 IFNHLR----NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLE-PVHT 127 (334)
Q Consensus 54 il~~l~----h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~-~L~y 127 (334)
.+..++ |.+- ..+.+.|..+ .+..++||||++|. +..+........ ... .++.+++. .+..
T Consensus 206 n~~~~~~~~~~~~~-----v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~---~ia~~~~~~~l~q 272 (437)
T TIGR01982 206 NASELGENFKNDPG-----VYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGL---DRK---ALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHhcCCCCC-----EEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCC---CHH---HHHHHHHHHHHHH
Confidence 555543 3332 0112333222 23468999999998 332222111111 111 22224444 4678
Q ss_pred hhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 128 CHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 128 LH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
+|..| ++|+|+||.||+++.++.++++|||++..+...
T Consensus 273 l~~~g----------------~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~ 310 (437)
T TIGR01982 273 VLRDG----------------FFHADLHPGNIFVLKDGKIIALDFGIVGRLSEE 310 (437)
T ss_pred HHhCC----------------ceeCCCCcccEEECCCCcEEEEeCCCeeECCHH
Confidence 89999 999999999999999999999999999877654
No 430
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.35 E-value=6.5e-12 Score=106.10 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCCCccccC
Q psy6542 110 LRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVES 189 (334)
Q Consensus 110 ~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~~~~~~t 189 (334)
.+..++.++.|++.||.|||+++ ||+|||++.++.+|+ ||+++...... ..|+
T Consensus 15 ~~~~~~~i~~qi~~~L~~lH~~~----------------------kp~Nil~~~~~~~~~--fG~~~~~~~~~---~~g~ 67 (176)
T smart00750 15 NEEEIWAVCLQCLRALRELHRQA----------------------KSGNILLTWDGLLKL--DGSVAFKTPEQ---SRVD 67 (176)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC----------------------CcccEeEcCccceee--ccceEeecccc---CCCc
Confidence 55667788889999999999872 999999999999999 99998765443 2578
Q ss_pred cccccccccc-c-cCCcceeeh---hHHHHHcCCCCCCCC
Q psy6542 190 DCILHGYIKK-L-GGPFVSAWQ---TRYAKLFPNRLELHP 224 (334)
Q Consensus 190 ~~~~~~~v~~-~-~~~~~~~w~---~~~~~l~~~~~~~~~ 224 (334)
+.|++||+.. . ....+|+|+ ++|++++ +..||..
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p~~~ 106 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALD-YELPYNE 106 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHh-CCCCccc
Confidence 9999999853 2 244667777 5666654 4556543
No 431
>KOG1166|consensus
Probab=99.32 E-value=2.8e-12 Score=131.46 Aligned_cols=155 Identities=16% Similarity=0.084 Sum_probs=107.7
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
+++.++||+|.+.. |+.||+|+-+...- ..|.--.+++.+|+ +-+ ...+..++.++...+..++|+||.
T Consensus 708 ~g~y~~vy~a~~~~-~~~~alK~e~P~~~-----WEfYI~~q~~~RLk-~~~----~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 708 EGSYGSVYVATHSN-GKLVALKVEKPPNP-----WEFYICLQVMERLK-PQM----LPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred cccceEEEEeecCC-CcEEEEEeecCCCc-----eeeeehHHHHHhhc-hhh----hcchHHHHHHHccCCcceeeeecc
Confidence 57888999999999 99999999886654 11222344566666 322 122266677777788889999999
Q ss_pred CCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC------
Q psy6542 92 SGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE------ 163 (334)
Q Consensus 92 ~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~------ 163 (334)
+.| +|.+...+ .-.+..++.+..|++.-++.||..+ |||+||||+|+||..
T Consensus 777 ~~Gtlld~~N~~~-----~m~e~lv~~~~~qml~ive~lH~~~----------------IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 777 PYGTLLDLINTNK-----VMDEYLVMFFSCQMLRIVEHLHAMG----------------IIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred ccccHHHhhccCC-----CCCchhhhHHHHHHHHHHHHHHhcc----------------eecccCCcceeEeecccCCCC
Confidence 988 55553221 1244556677789999999999999 999999999999943
Q ss_pred -CCCEEEEecccccccCCCCC----CccccCccccccccc
Q psy6542 164 -HGHVRISDLGLACDFSKKKP----HASVESDCILHGYIK 198 (334)
Q Consensus 164 -~~~vkl~DFGla~~~~~~~~----~~~~~t~~~~~~~v~ 198 (334)
...++|+|||-+-.+..-.. ....+|...-..||.
T Consensus 836 ~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~ 875 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMR 875 (974)
T ss_pred cccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHh
Confidence 23489999999864432221 223445555556663
No 432
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.27 E-value=2.4e-11 Score=101.95 Aligned_cols=127 Identities=14% Similarity=0.034 Sum_probs=86.9
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+...+||++... +..|++|+...... ....+..|+.+++.+.+.++ ..+++.... ...++||||++
T Consensus 9 G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~-------~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 9 GMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGI-------GPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred cccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCC-------CCceEEEeC--CCCeEEEEecC
Confidence 445677877654 77899998765432 12245679999999876654 145555443 23479999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
|. +... . . ... .+..+++.+|..||..+. ..+.++|+|++|.||+++ ++.++++|
T Consensus 75 G~~l~~~---~-----~-~~~---~~~~~l~~~l~~LH~~~~-----------~~~~~~HgD~~~~Nil~~-~~~~~liD 130 (170)
T cd05151 75 GSELLTE---D-----F-SDP---ENLEKIAKLLKKLHSSPL-----------PDLVPCHNDLLPGNFLLD-DGRLWLID 130 (170)
T ss_pred CCccccc---c-----c-cCH---HHHHHHHHHHHHHhCCCC-----------CCceeecCCCCcCcEEEE-CCeEEEEe
Confidence 98 3111 0 0 111 223489999999999861 123369999999999999 67899999
Q ss_pred cccccc
Q psy6542 172 LGLACD 177 (334)
Q Consensus 172 FGla~~ 177 (334)
||.+..
T Consensus 131 f~~a~~ 136 (170)
T cd05151 131 WEYAGM 136 (170)
T ss_pred cccccC
Confidence 999864
No 433
>KOG1240|consensus
Probab=99.26 E-value=1.5e-12 Score=132.15 Aligned_cols=216 Identities=18% Similarity=0.252 Sum_probs=137.7
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCc--chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPH--ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~--~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+-||.+|++.+ |. |.||++-+... +=+..++...|++ +..++|||. +.+-.+...+..-|||=+|..
T Consensus 36 FlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~--------lPfqk~~~t~kAAylvRqyvk 104 (1431)
T KOG1240|consen 36 FLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNC--------LPFQKVLVTDKAAYLVRQYVK 104 (1431)
T ss_pred hhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcc--------cchHHHHHhhHHHHHHHHHHh
Confidence 34677777776 55 89999776553 2112223344666 778899999 777777777778888999998
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEe
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISD 171 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~D 171 (334)
++ .|++..+ .|....++. .|+.|++.||.-+|..| |.|+|||.+|||+++=+.+.|+|
T Consensus 105 hnLyDRlSTR---PFL~~iEKk--WiaFQLL~al~qcH~~g----------------VcHGDIKsENILiTSWNW~~LtD 163 (1431)
T KOG1240|consen 105 HNLYDRLSTR---PFLVLIEKK--WIAFQLLKALSQCHKLG----------------VCHGDIKSENILITSWNWLYLTD 163 (1431)
T ss_pred hhhhhhhccc---hHHHHHHHH--HHHHHHHHHHHHHHHcC----------------ccccccccceEEEeeechhhhhc
Confidence 88 5555443 344444443 44569999999999999 99999999999999999999999
Q ss_pred ccccccc--CCCCC-------CccccCcccccccc--cccc-----------CCcceeeh--hH-HHHHcCCCCCCCCCC
Q psy6542 172 LGLACDF--SKKKP-------HASVESDCILHGYI--KKLG-----------GPFVSAWQ--TR-YAKLFPNRLELHPES 226 (334)
Q Consensus 172 FGla~~~--~~~~~-------~~~~~t~~~~~~~v--~~~~-----------~~~~~~w~--~~-~~~l~~~~~~~~~~~ 226 (334)
|..-+.. ..+.+ .+.....||.+||- ...+ .+..|+++ |+ .|++.-|+++|.-..
T Consensus 164 FAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ 243 (1431)
T KOG1240|consen 164 FASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ 243 (1431)
T ss_pred ccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH
Confidence 9987633 22221 12223578999985 1111 23455566 54 455555677662211
Q ss_pred -------CCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCCC
Q psy6542 227 -------GQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 227 -------~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
....++..+ +.+. +- .-+..+..++.+||..|+.++
T Consensus 244 L~aYr~~~~~~~e~~L-e~Ie----d~---~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 244 LLAYRSGNADDPEQLL-EKIE----DV---SLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred HHhHhccCccCHHHHH-HhCc----Cc---cHHHHHHHHHccCchhccCHH
Confidence 011111111 1111 11 123445555688999999887
No 434
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=2.3e-10 Score=98.47 Aligned_cols=133 Identities=12% Similarity=0.113 Sum_probs=89.1
Q ss_pred eEEEeceeCC------CCCcEEEEEeeCCCc-----------chH---------Hhh----hHHHHHHHHHhcCCCCccc
Q psy6542 16 WRVKPPSLKP------LGFPIQIGMLRHRPH-----------ESR---------VAK----WRPYIQEIFNHLRNEPFKK 65 (334)
Q Consensus 16 ~~V~~a~~~~------~~~~vAIK~l~~~~~-----------~~~---------~~~----~~~~E~~il~~l~h~~i~~ 65 (334)
-.||.|.... .+..+|||+.+.... +.+ ..+ +..+|+..|+++....+
T Consensus 11 a~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl~~~Gv-- 88 (197)
T cd05146 11 SVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRMQKAGI-- 88 (197)
T ss_pred eEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 4688887654 357999999875321 111 011 33489999999875433
Q ss_pred ccccceeeEEEEeecCCeEEEEEEccCCC-h--hHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh-hcCCCCCchhhhh
Q psy6542 66 CVLLFKMNLYKVTSEPNSHYIIGVRQSGP-K--DQISRSKINRYHKKLRKCFIRRTVQLLEPVHTC-HSALNKNPLIAIF 141 (334)
Q Consensus 66 ~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l--~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yL-H~~~~~~~~~~~~ 141 (334)
-+.+.+++ +..+|||||++|+ + ..+... .. .......+..|++.+|..+ |..+
T Consensus 89 ----~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~---~~~~~~~i~~~i~~~l~~l~H~~g--------- 145 (197)
T cd05146 89 ----PCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KL---NDEEMKNAYYQVLSMMKQLYKECN--------- 145 (197)
T ss_pred ----CCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---cc---CHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 01566654 4678999999875 1 111110 11 1122234456999999999 8898
Q ss_pred hcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 142 LTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 142 ~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
++|+||++.|||++ ++.+.|+|||-|......
T Consensus 146 -------lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 146 -------LVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred -------eecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence 99999999999997 478999999988766544
No 435
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=99.16 E-value=3.5e-12 Score=95.72 Aligned_cols=115 Identities=63% Similarity=1.033 Sum_probs=107.9
Q ss_pred ccccccccccccCCcceeehhHHHHHcCCCCCCCCCCCCCcccchhcccccccccccccHhHHHHHHHhhccCchhhcCC
Q psy6542 190 DCILHGYIKKLGGPFVSAWQTRYAKLFPNRLELHPESGQSKPELIFMDQIEEVSQDLITVKGEQCVQLKLTRDTRIVLTN 269 (334)
Q Consensus 190 ~~~~~~~v~~~~~~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~r~~~ 269 (334)
.+.+.+|+++.|+|+.+.|..-|..++++++.+++.+....+++++++++.++..++..+++..||...+..+++..+++
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~vlt~ 81 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIVLTN 81 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCCcEEEeehhhhcchhheeeccCceEEEEEcCCceEEEec
Confidence 35677899999999999999999999999999999998889999999999999989888899999999998899999999
Q ss_pred CcccCCCCCCCCChhhHHHhhhhcccccchhHHHHHHHHHHhCCCC
Q psy6542 270 PVSQIKGPFPHVDEIGLKEWSLSLRSAHKCSQELLGSMARKAGKIY 315 (334)
Q Consensus 270 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~lL~~l~~~~~~~~ 315 (334)
. +++++.+|..+.+..++.+++++++|.++++|.|
T Consensus 82 ~-----------d~i~l~qW~~elr~a~r~Sq~ll~~m~Kka~K~y 116 (116)
T cd01240 82 S-----------DEIELKQWKKELRDAHRESQQLLQRMPKKANKIY 116 (116)
T ss_pred C-----------CcHHHHHHHHHHHHHHHHHHHHHHHhHhhccCCC
Confidence 9 8999999999999999999999999999999876
No 436
>KOG0590|consensus
Probab=99.02 E-value=4.9e-11 Score=119.23 Aligned_cols=166 Identities=20% Similarity=0.226 Sum_probs=121.9
Q ss_pred EEEecee-CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEEEEccCCC
Q psy6542 17 RVKPPSL-KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP 94 (334)
Q Consensus 17 ~V~~a~~-~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~ 94 (334)
.|-.+.. ..+...+|.|.+.....+.....+...|..+-+.+. |.|+ +.+++...+.+..+++++|..|+
T Consensus 35 ~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~--------~~~~~~~~~~~~~~~~~~~s~g~ 106 (601)
T KOG0590|consen 35 SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNT--------VHMIEPSSSPRSYLLSLSYSDGG 106 (601)
T ss_pred hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccc--------cccCCccCCCcccccccCccccc
Confidence 3333433 234445677777766544445556667888888888 9999 99999999999999999998888
Q ss_pred --hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh-cCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCC-CEEEE
Q psy6542 95 --KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCH-SALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHG-HVRIS 170 (334)
Q Consensus 95 --l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH-~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~-~vkl~ 170 (334)
.+.+...............++. |+..++.|+| ..+ +.|||+||+|.+++..+ .+++.
T Consensus 107 ~~f~~i~~~~~~~~~~~~~~~~~~---ql~s~l~~~H~~~~----------------~~h~~ikP~n~~l~~s~~~l~~~ 167 (601)
T KOG0590|consen 107 SLFSKISHPDSTGTSSSSASRYLP---QLNSGLSYLHPENG----------------VTHRDIKPSNSLLDESGSALKIA 167 (601)
T ss_pred ccccccccCCccCCCCcchhhhhh---hhccCccccCcccc----------------cccCCCCCccchhccCCCcccCC
Confidence 2222122221333445555555 9999999999 888 99999999999999999 99999
Q ss_pred ecccccccCC-CCC----Ccccc-Ccccccccccc---ccCCcceeeh
Q psy6542 171 DLGLACDFSK-KKP----HASVE-SDCILHGYIKK---LGGPFVSAWQ 209 (334)
Q Consensus 171 DFGla~~~~~-~~~----~~~~~-t~~~~~~~v~~---~~~~~~~~w~ 209 (334)
|||+|..+.. ... ...+| ++.|++||+.. ...+..|.|+
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S 215 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWS 215 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccc
Confidence 9999997766 322 33567 88888898743 3366788888
No 437
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.02 E-value=4.3e-09 Score=90.09 Aligned_cols=131 Identities=20% Similarity=0.190 Sum_probs=80.1
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCc------------------------chHHhhhHHHHHHHHHhcCCCCccccccccee
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPH------------------------ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKM 72 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~------------------------~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v 72 (334)
.||.|...+ |..+|||+-+.... ......+..+|.+.|+.+..-++ .+.
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv------~vP 73 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGV------PVP 73 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-------SS-
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCc------cCC
Confidence 388888765 77999999875321 11123367789999999987642 016
Q ss_pred eEEEEeecCCeEEEEEEccC--CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHH-hhcCCCCCchhhhhhcCCCCc
Q psy6542 73 NLYKVTSEPNSHYIIGVRQS--GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHT-CHSALNKNPLIAIFLTLSVPC 148 (334)
Q Consensus 73 ~~~~~~~~~~~~~ivmEy~~--g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~y-LH~~~~~~~~~~~~~~~~~~~ 148 (334)
+.+++. ...|||||++ |. +..+...... ...... ++.+++..+.. +|..|
T Consensus 74 ~p~~~~----~~~ivME~I~~~G~~~~~l~~~~~~---~~~~~~---~~~~il~~~~~~~~~~g---------------- 127 (188)
T PF01163_consen 74 KPYDYN----RNVIVMEYIGEDGVPLPRLKDVDLS---PEEPKE---LLEEILEEIIKMLHKAG---------------- 127 (188)
T ss_dssp -EEEEE----TTEEEEE--EETTEEGGCHHHCGGG---GSTHHH---HHHHHHHHHHHHHHCTT----------------
T ss_pred cEEEEe----CCEEEEEecCCCccchhhHHhcccc---chhHHH---HHHHHHHHHHHHHHhcC----------------
Confidence 666543 3479999999 54 3333222211 112222 23377775555 57999
Q ss_pred EEeeCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 149 LHFRDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 149 iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
++|+||.+.|||++++ .+.++|||.+......
T Consensus 128 ivHGDLs~~NIlv~~~-~~~iIDf~qav~~~~p 159 (188)
T PF01163_consen 128 IVHGDLSEYNILVDDG-KVYIIDFGQAVDSSHP 159 (188)
T ss_dssp EEESS-STTSEEEETT-CEEE--GTTEEETTST
T ss_pred ceecCCChhhEEeecc-eEEEEecCcceecCCc
Confidence 9999999999999887 8999999988765543
No 438
>KOG1023|consensus
Probab=99.00 E-value=1.3e-09 Score=105.02 Aligned_cols=146 Identities=10% Similarity=0.010 Sum_probs=103.8
Q ss_pred HHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy6542 55 FNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALN 133 (334)
Q Consensus 55 l~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~ 133 (334)
|+.+.|.|+ .+|++.+.++...++|.+||.-| +..++...... .+..+...++..|+.||.|||...
T Consensus 1 l~~l~h~n~--------~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~---~d~~F~~s~~rdi~~Gl~ylh~s~- 68 (484)
T KOG1023|consen 1 LRQLDHDNL--------NKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIK---LDYFFILSFIRDISKGLAYLHNSP- 68 (484)
T ss_pred Ccccchhhh--------hhheeeEecCCceEEEEeeecCccHHhHHhccccC---ccHHHHHHHHHHHHHHHHHHhcCc-
Confidence 357899999 99999999999999999999888 43333332222 245555566779999999999875
Q ss_pred CCchhhhhhcCCCCcE-EeeCCCCCceeeCCCCCEEEEecccccccCC----CCCCccccCccccccccccc--------
Q psy6542 134 KNPLIAIFLTLSVPCL-HFRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVESDCILHGYIKKL-------- 200 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~i-iHrDlKp~NiLl~~~~~vkl~DFGla~~~~~----~~~~~~~~t~~~~~~~v~~~-------- 200 (334)
| .|+.++..|++++....+||+|||+...... ...........+++||+...
T Consensus 69 ---------------i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~ 133 (484)
T KOG1023|consen 69 ---------------IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLES 133 (484)
T ss_pred ---------------ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccc
Confidence 5 8999999999999999999999999876642 11122233566788887433
Q ss_pred -cCCcceeeh--hHHHHHcCCCCCCCCCCC
Q psy6542 201 -GGPFVSAWQ--TRYAKLFPNRLELHPESG 227 (334)
Q Consensus 201 -~~~~~~~w~--~~~~~l~~~~~~~~~~~~ 227 (334)
+....|+.+ ++.+.+....-||.....
T Consensus 134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~ 163 (484)
T KOG1023|consen 134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNL 163 (484)
T ss_pred cccccCCeehHHHHHHHHHhccCccccccc
Confidence 344566666 444444555556655443
No 439
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.99 E-value=8.1e-09 Score=90.17 Aligned_cols=149 Identities=14% Similarity=0.021 Sum_probs=96.1
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCC--cccccccceeeEEEEeecC---CeEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEP--FKKCVLLFKMNLYKVTSEP---NSHYII 87 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~--i~~~~~~~~v~~~~~~~~~---~~~~iv 87 (334)
+..-.||++.... |..+++|........ .....+..|.++++.+++.+ + .+++.+.... +..++|
T Consensus 9 G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~v--------p~~~~~~~~~~~~~~~~~v 78 (223)
T cd05154 9 GQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPV--------PKVLALCEDPSVLGTPFYV 78 (223)
T ss_pred CccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCC--------CCEEEECCCCCccCCceEE
Confidence 4445677766544 689999998754432 12346778999999998643 4 6666666543 367899
Q ss_pred EEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hh---------------------------
Q psy6542 88 GVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNP-LI--------------------------- 138 (334)
Q Consensus 88 mEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~-~~--------------------------- 138 (334)
|||++|. +...... ... .......++.+++.+|..||+...... ..
T Consensus 79 ~e~i~G~~l~~~~~~--~~~---~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 79 MERVDGRVLRDRLLR--PEL---SPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EEEeCCEecCCCCCC--CCC---CHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 9999998 3221110 112 222233445599999999997542110 00
Q ss_pred ------------hhhhcCCCCcEEeeCCCCCceeeCC--CCCEEEEeccccc
Q psy6542 139 ------------AIFLTLSVPCLHFRDLKPANILLDE--HGHVRISDLGLAC 176 (334)
Q Consensus 139 ------------~~~~~~~~~~iiHrDlKp~NiLl~~--~~~vkl~DFGla~ 176 (334)
...-+...++++|+|+.|.||+++. ++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 0000113578899999999999998 5668999999875
No 440
>KOG0601|consensus
Probab=98.96 E-value=9.5e-10 Score=106.21 Aligned_cols=172 Identities=13% Similarity=0.009 Sum_probs=130.3
Q ss_pred CCCCceEEEecee--CCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecCCeEEEE
Q psy6542 11 SRVSKWRVKPPSL--KPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEPNSHYII 87 (334)
Q Consensus 11 ~~~~~~~V~~a~~--~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~~~~~iv 87 (334)
+-+++|.||.+.+ ..++..+|+|.=+.........++-.+|+.....++ |+|. ++.+..+...+.+|+-
T Consensus 125 ~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~--------v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 125 LPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENP--------VRDSPAWEGSGILFIQ 196 (524)
T ss_pred CCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccc--------cccCcccccCCcceee
Confidence 3388899999999 999999999984433332223344456777777775 8888 9999999999999999
Q ss_pred EEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHH----HHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC
Q psy6542 88 GVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLE----PVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE 163 (334)
Q Consensus 88 mEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~----~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~ 163 (334)
+|+|...+........+.+ ....++..+.+... ||..+|+.+ ++|-|+||+||.+..
T Consensus 197 tE~~~~sl~~~~~~~~~~~---p~~~l~~~~~~~~~~~~~al~~~hs~~----------------~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 197 TELCGESLQSYCHTPCNFL---PDNLLWNSLRDWLSRDVTALSHLHSNN----------------IVHDDLKPANIFTTS 257 (524)
T ss_pred eccccchhHHhhhcccccC---CchhhhhHHhhhhhcccccccccCCCc----------------ccccccchhheeccc
Confidence 9999977544434333323 34445566667777 999999999 999999999999999
Q ss_pred C-CCEEEEecccccccCCCCCC-------ccccCccccccccccccCCcceeeh
Q psy6542 164 H-GHVRISDLGLACDFSKKKPH-------ASVESDCILHGYIKKLGGPFVSAWQ 209 (334)
Q Consensus 164 ~-~~vkl~DFGla~~~~~~~~~-------~~~~t~~~~~~~v~~~~~~~~~~w~ 209 (334)
+ ..++++|||+...+....-. ...|...|+.+++...-+++.++..
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~ 311 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF 311 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc
Confidence 9 88999999999987666421 1145678899998777777766666
No 441
>KOG1033|consensus
Probab=98.95 E-value=1.3e-10 Score=110.41 Aligned_cols=114 Identities=18% Similarity=0.162 Sum_probs=83.8
Q ss_pred eEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 83 SHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 83 ~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
++||.|++|.-+ .|++.++... .+........|+.|++.|+.| ++ .+|||+||.||.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~--e~~s~s~~~~~~~q~~~~~~y---k~----------------~ihrdlkp~nif 388 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG--EERSLSLMLDIFKQIAPAVEY---KG----------------LIHRDLKPSNIF 388 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc--cccchhHHHHHHHhhccchhh---cc----------------chhhhccccccc
Confidence 589999999887 4455433322 222444566788899999999 77 999999999999
Q ss_pred eCCCCCEEEEecccccccCCCC-------C-CccccCcccccccc-ccccCCcceeeh----hHHHHHcC
Q psy6542 161 LDEHGHVRISDLGLACDFSKKK-------P-HASVESDCILHGYI-KKLGGPFVSAWQ----TRYAKLFP 217 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~~~~~~-------~-~~~~~t~~~~~~~v-~~~~~~~~~~w~----~~~~~l~~ 217 (334)
...++.+||.||||........ . ....||..||.||- ....|....++. +++|++..
T Consensus 389 ~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~ 458 (516)
T KOG1033|consen 389 FSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ 458 (516)
T ss_pred cccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH
Confidence 9999999999999998665544 2 23568999999995 345566555555 66666653
No 442
>KOG0195|consensus
Probab=98.94 E-value=6.4e-10 Score=97.86 Aligned_cols=180 Identities=14% Similarity=0.072 Sum_probs=119.5
Q ss_pred CCCCCCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEE
Q psy6542 9 RESRVSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIG 88 (334)
Q Consensus 9 ~~~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivm 88 (334)
+|-|-++|+ |..++.|++.-..-..+....|.+|+-.|+-+.|||| ..+.+++.++-.+.++.
T Consensus 204 gelwrgrwq---------gndivakil~vr~~t~risrdfneefp~lrifshpni--------lpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 204 GELWRGRWQ---------GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNI--------LPVLGACNSPPNLVIIS 266 (448)
T ss_pred ccccccccc---------CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCch--------hhhhhhccCCCCceEee
Confidence 566666666 5667778888777677777889999999999999999 99999999998999999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEE-eeCCCCCceeeCCCCCE
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLH-FRDLKPANILLDEHGHV 167 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~ii-HrDlKp~NiLl~~~~~v 167 (334)
.|++-|.-+-..+.... -.....+...++..++.|+.|||+.. |++ ---|....+++|++-+.
T Consensus 267 q~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle---------------p~ipr~~lns~hvmidedlta 330 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE---------------PMIPRFYLNSKHVMIDEDLTA 330 (448)
T ss_pred eeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc---------------hhhhhhhcccceEEecchhhh
Confidence 99998822211221111 12234455677789999999999987 244 33566778888888665
Q ss_pred EEE--ecccccccCCCCCCccccCcccccccccc-----ccCCcceeeh--hHHHHHcCCCCCCCCCC
Q psy6542 168 RIS--DLGLACDFSKKKPHASVESDCILHGYIKK-----LGGPFVSAWQ--TRYAKLFPNRLELHPES 226 (334)
Q Consensus 168 kl~--DFGla~~~~~~~~~~~~~t~~~~~~~v~~-----~~~~~~~~w~--~~~~~l~~~~~~~~~~~ 226 (334)
+|. |--++- .. ....-+|.+|+||.+. ......|+|+ ++.-.+.+..+||...+
T Consensus 331 rismad~kfsf--qe---~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls 393 (448)
T KOG0195|consen 331 RISMADTKFSF--QE---VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS 393 (448)
T ss_pred heecccceeee--ec---cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC
Confidence 553 322221 11 1112257788888632 2245678888 43333466666765444
No 443
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=1.1e-08 Score=85.81 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=69.8
Q ss_pred hHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-h-hHHhhhhhhhhhHHHHHHHHHHHH
Q psy6542 42 SRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-K-DQISRSKINRYHKKLRKCFIRRTV 119 (334)
Q Consensus 42 ~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l-~~l~~~~~~~~~~~~~~~~~~i~~ 119 (334)
.....+..+|+.++.+++--.| ....+|++ +.+.-.|+|||++|. + +.+... . ..++.
T Consensus 40 klrr~Rt~~Earil~~a~~~GV------~~P~v~dv--D~~~~~I~me~I~G~~lkd~l~~~--------~----~~~~r 99 (204)
T COG3642 40 KLRRERTRREARILAKAREAGV------PVPIVYDV--DPDNGLIVMEYIEGELLKDALEEA--------R----PDLLR 99 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC------CCCeEEEE--cCCCCEEEEEEeCChhHHHHHHhc--------c----hHHHH
Confidence 3344577889999999875544 11334433 556678999999999 2 333222 0 12333
Q ss_pred HHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 120 QLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 120 qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.+=.-+.-||..+ |+|+||.++||++++++ +.++||||+.
T Consensus 100 ~vG~~vg~lH~~g----------------ivHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 100 EVGRLVGKLHKAG----------------IVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred HHHHHHHHHHhcC----------------eecCCCccceEEEeCCc-EEEEECCccc
Confidence 5556677799999 99999999999998866 9999999986
No 444
>KOG3087|consensus
Probab=98.93 E-value=1.5e-08 Score=84.96 Aligned_cols=131 Identities=20% Similarity=0.139 Sum_probs=86.2
Q ss_pred EEEeceeCCCCCcEEEEEeeCCC--c----chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRP--H----ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~--~----~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+|+.+. -.|+.+.||.=.... + ..-.+++..+|++++.++.--.| ...++ ++.+.+.-.|+|||
T Consensus 22 rv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI------~~P~l--~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 22 RVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI------PAPRL--IFIDTYGGQIYMEF 91 (229)
T ss_pred eEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC------CCceE--EEEecCCCeEEEEe
Confidence 455443 456777777643322 1 33345577889999998775544 11233 34456677899999
Q ss_pred cCCC---hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC-
Q psy6542 91 QSGP---KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH- 166 (334)
Q Consensus 91 ~~g~---l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~- 166 (334)
++|. .+++............ ....+.+|=..+.-||.++ ++|+||..+||++.+++.
T Consensus 92 ~~g~~~vk~~i~~~~~~~~~d~~---~~~~~~~iG~~igklH~nd----------------iiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDESEDEG---LAELARRIGELIGKLHDND----------------IIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred ccchhHHHHHHHHHccCcccchh---HHHHHHHHHHHHHHhhhCC----------------eecccccccceEEecCCCc
Confidence 9994 4555444332222211 2344447777788999999 999999999999977754
Q ss_pred --EEEEeccccc
Q psy6542 167 --VRISDLGLAC 176 (334)
Q Consensus 167 --vkl~DFGla~ 176 (334)
+.++|||++.
T Consensus 153 ~~~~lIdfgls~ 164 (229)
T KOG3087|consen 153 ITPILIDFGLSS 164 (229)
T ss_pred CceEEEeecchh
Confidence 5899999975
No 445
>KOG1243|consensus
Probab=98.90 E-value=1.9e-08 Score=98.49 Aligned_cols=138 Identities=14% Similarity=0.174 Sum_probs=105.2
Q ss_pred CCCCceEEE-eceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEE
Q psy6542 11 SRVSKWRVK-PPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGV 89 (334)
Q Consensus 11 ~~~~~~~V~-~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmE 89 (334)
.-.+.|-|| .+..+.++.+|.|.+.+.... .......+-++-|+.++|||| +++++.++..+.+|||+|
T Consensus 20 ~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~I--------l~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 20 TAFSSEALWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNI--------LSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred ccCCCcccccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchh--------hhhhhhhcccCceEEEee
Confidence 344566666 588889999999999886665 223344557788999999999 999999999999999999
Q ss_pred ccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEE
Q psy6542 90 RQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRI 169 (334)
Q Consensus 90 y~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl 169 (334)
-+.--...+.... ....-.-+.||+.||.|||+.++ ++|.++.-+.|.++..|..||
T Consensus 90 rV~Pl~~~lk~l~--------~~~v~~Gl~qIl~AL~FL~~d~~---------------lvHgNv~~~SVfVn~~GeWkL 146 (690)
T KOG1243|consen 90 RVRPLETVLKELG--------KEEVCLGLFQILAALSFLNDDCN---------------LVHGNVCKDSVFVNESGEWKL 146 (690)
T ss_pred ccccHHHHHHHhH--------HHHHHHHHHHHHHHHHHHhccCC---------------eeeccEeeeeEEEcCCCcEEE
Confidence 8766533332211 11122235599999999986553 999999999999999999999
Q ss_pred EecccccccCCC
Q psy6542 170 SDLGLACDFSKK 181 (334)
Q Consensus 170 ~DFGla~~~~~~ 181 (334)
++|-++......
T Consensus 147 ggle~v~~~~~~ 158 (690)
T KOG1243|consen 147 GGLELVSKASGF 158 (690)
T ss_pred eeeEEEeccccC
Confidence 999998654433
No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=7.9e-08 Score=87.03 Aligned_cols=127 Identities=13% Similarity=-0.013 Sum_probs=81.1
Q ss_pred CCCcEEEEEeeCCCcchHHh---------hhHHHHHHHHHhcCCCCcccccccceeeEEEEeec-----CCeEEEEEEcc
Q psy6542 26 LGFPIQIGMLRHRPHESRVA---------KWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSE-----PNSHYIIGVRQ 91 (334)
Q Consensus 26 ~~~~vAIK~l~~~~~~~~~~---------~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~-----~~~~~ivmEy~ 91 (334)
.|+.|.||...........+ ..+.+|...+..|..-+| -. .....+++. ...-++|||++
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GI---pt---P~pVa~~e~~~~~~~~~s~LVte~l 117 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGV---DT---MTGVAFGERGSNPATRTSFIITEDL 117 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCC---CC---CCeeEEEEecCCCccceeEEEEeeC
Confidence 46789999664332111111 136689998888755444 00 233223321 23578999999
Q ss_pred CCC--hhHHhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC-----
Q psy6542 92 SGP--KDQISRSK-INRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE----- 163 (334)
Q Consensus 92 ~g~--l~~l~~~~-~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~----- 163 (334)
+|. +..+.... .... .......++.+++..+.-||..| |+|+|+++.|||++.
T Consensus 118 ~~~~sL~~~~~~~~~~~~---~~~~~~~ll~~la~~i~~LH~~G----------------i~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 118 APTISLEDYCADWATNPP---DPRLKRMLIKRVATMVRDMHAAG----------------INHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred CCCccHHHHHHhhcccCC---CHHHHHHHHHHHHHHHHHHHHCc----------------CccCCCChhhEEEeccccCC
Confidence 996 44343221 1111 12222345569999999999999 999999999999975
Q ss_pred --CCCEEEEecccccc
Q psy6542 164 --HGHVRISDLGLACD 177 (334)
Q Consensus 164 --~~~vkl~DFGla~~ 177 (334)
+..+.++||+.++.
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46799999998863
No 447
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.63 E-value=3.8e-07 Score=79.50 Aligned_cols=143 Identities=15% Similarity=0.066 Sum_probs=91.6
Q ss_pred CCCCceEEEeceeCCCCCcEEEEEeeCCCcch-----HHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC----
Q psy6542 11 SRVSKWRVKPPSLKPLGFPIQIGMLRHRPHES-----RVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP---- 81 (334)
Q Consensus 11 ~~~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~-----~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~---- 81 (334)
.|+.-|.+........++.+-+|......... .......+|...+..|..-.| -..+...+....
T Consensus 16 ~R~~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi------~tP~pva~~~~r~~~~ 89 (206)
T PF06293_consen 16 GRRGGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGI------PTPEPVAYGERRKGGG 89 (206)
T ss_pred CCceEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCc
Confidence 35566665555444556667777543221111 123356678888888775554 013444444431
Q ss_pred CeEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 82 NSHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 82 ~~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
...++|||+++|. ++.+...... .. ......++.+++..+.-||++| |+|+|+++.||
T Consensus 90 ~~s~lite~l~~~~~L~~~~~~~~~-~~---~~~~~~ll~~l~~~i~~lH~~g----------------i~H~Dl~~~NI 149 (206)
T PF06293_consen 90 YRSYLITEALPGAQDLRDLLQQWEQ-LD---PSQRRELLRALARLIAKLHDAG----------------IYHGDLNPSNI 149 (206)
T ss_pred eeEEEEEEeCCCcccHHHHHHhhcc-cc---hhhHHHHHHHHHHHHHHHHHCc----------------CCCCCCCcccE
Confidence 3458999999996 4443332111 11 2222344559999999999999 99999999999
Q ss_pred eeCCCC---CEEEEecccccccC
Q psy6542 160 LLDEHG---HVRISDLGLACDFS 179 (334)
Q Consensus 160 Ll~~~~---~vkl~DFGla~~~~ 179 (334)
|++.++ .+.++||+.++...
T Consensus 150 Lv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 150 LVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred EEeCCCCceeEEEEcchhceeCC
Confidence 999987 79999999887544
No 448
>KOG1266|consensus
Probab=98.60 E-value=9.2e-09 Score=92.96 Aligned_cols=188 Identities=12% Similarity=0.090 Sum_probs=108.4
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhh--hHHHHHHHHHhcCCCCcccccccceeeEEEEeecCC-----eEEEEEE
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAK--WRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPN-----SHYIIGV 89 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~--~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~-----~~~ivmE 89 (334)
-||++-+.++|.+|.--.+.......-..+ ....-+.-+-++.|.|+ |+++.++.+.. +..++.|
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnl--------vkfH~yw~d~K~~e~~rviFite 152 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNL--------VKFHKYWTDKKYEEKPRVIFITE 152 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHH--------HHHHHhhcccccccccceEEEEe
Confidence 356666677776664333221110000000 11112334556789999 99999887543 4788999
Q ss_pred ccCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCE
Q psy6542 90 RQSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHV 167 (334)
Q Consensus 90 y~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~v 167 (334)
|+..| ..++.+.+... ........-+|+.||++||.|||+.. |||+|.++...-|.+..+|-+
T Consensus 153 ymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsal~yLhs~~--------------PpiihgnlTc~tifiq~ngLI 217 (458)
T KOG1266|consen 153 YMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSALSYLHSCD--------------PPIIHGNLTCDTIFIQHNGLI 217 (458)
T ss_pred cccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhccC--------------CccccCCcchhheeecCCceE
Confidence 99888 34443333221 22234445678889999999999987 889999999999999988877
Q ss_pred EEEecccccccCCC----C---CCccccCccccccccc-ccc-CCcceeeh---hHHHHHcCCCCCCCCCCCC
Q psy6542 168 RISDLGLACDFSKK----K---PHASVESDCILHGYIK-KLG-GPFVSAWQ---TRYAKLFPNRLELHPESGQ 228 (334)
Q Consensus 168 kl~DFGla~~~~~~----~---~~~~~~t~~~~~~~v~-~~~-~~~~~~w~---~~~~~l~~~~~~~~~~~~~ 228 (334)
|+.- +--...... . .....+.+.+.+|+-- ... ...+|+.. |..++..++..+-.+.+..
T Consensus 218 kig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~ 289 (458)
T KOG1266|consen 218 KIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKV 289 (458)
T ss_pred Eecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCccee
Confidence 7642 111111000 0 0111223344444431 111 23344444 8889988888775555543
No 449
>KOG3741|consensus
Probab=98.58 E-value=3.9e-07 Score=87.20 Aligned_cols=140 Identities=15% Similarity=0.084 Sum_probs=105.5
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee----cCCeEEEEEEccC
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS----EPNSHYIIGVRQS 92 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~----~~~~~~ivmEy~~ 92 (334)
--|+|....+|..|.+|.+.-.+.....+ -..-+++++++.|+|+ |.+.++|. .+..+++|++|.+
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk--~t~lve~wkkl~h~Nv--------V~frevf~t~tF~D~SlvlvYDYyP 360 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQSTNK--DTSLVEAWKKLCHTNV--------VPFREVFLTYTFGDLSLVLVYDYYP 360 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccCccc--chHHHHHHHHhccCce--------eehhhhhhhhccCcceEEEEEecCC
Confidence 35888999999999999995443311111 1126889999999999 99999887 3467999999988
Q ss_pred CC--h-hHHhhhhh----------hhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 93 GP--K-DQISRSKI----------NRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 93 g~--l-~~l~~~~~----------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
+. + +....... .......+..+|.++.|+..||.++|+.| +.-+-|-|.+|
T Consensus 361 ~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG----------------LAck~L~~~kI 424 (655)
T KOG3741|consen 361 SSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG----------------LACKTLDLKKI 424 (655)
T ss_pred CCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC----------------ceeecccHhHe
Confidence 87 2 22211111 11233456788999999999999999999 88899999999
Q ss_pred eeCCCCCEEEEecccccccCCCC
Q psy6542 160 LLDEHGHVRISDLGLACDFSKKK 182 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~~~~~~ 182 (334)
|++.+-.++|...|+...+..+.
T Consensus 425 lv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 425 LVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred EeeCcceEEEecccceeeecCCC
Confidence 99998889999888887665443
No 450
>KOG0601|consensus
Probab=98.54 E-value=5.6e-08 Score=94.12 Aligned_cols=134 Identities=18% Similarity=0.076 Sum_probs=98.8
Q ss_pred EEEeceeC-CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhc-CCCCcccccccceeeEEEEeecCCeEEEEEEccCCC
Q psy6542 17 RVKPPSLK-PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHL-RNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP 94 (334)
Q Consensus 17 ~V~~a~~~-~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l-~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~ 94 (334)
+|+..... .++..|++|.+............-..|+.+...+ .|.++ +.++..+......||--|||+|+
T Consensus 280 ~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~--------~g~~~~W~~~r~~~ip~e~~~~~ 351 (524)
T KOG0601|consen 280 SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPS--------VGKNSSWSQLRQGYIPLEFCEGG 351 (524)
T ss_pred cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccccc--------CCCCCCccccccccCchhhhcCc
Confidence 44444434 7888999999887655332333334577777666 48888 99999999888889999999988
Q ss_pred hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCC-CCEEEEecc
Q psy6542 95 KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEH-GHVRISDLG 173 (334)
Q Consensus 95 l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~-~~vkl~DFG 173 (334)
...+...-. ........+.+..|++.++.++|+.. ++|+|+||+||++.++ +..++.|||
T Consensus 352 s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~~----------------~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 352 SSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSKL----------------FVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred chhhhhHHH---HhcCcchhhhhHHHHHhccccccchh----------------hhcccccccceeeccchhhhhccccc
Confidence 322222111 12234445667779999999999999 9999999999999887 778999999
Q ss_pred cccc
Q psy6542 174 LACD 177 (334)
Q Consensus 174 la~~ 177 (334)
.+..
T Consensus 413 ~~t~ 416 (524)
T KOG0601|consen 413 CWTR 416 (524)
T ss_pred cccc
Confidence 9875
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.33 E-value=3.8e-06 Score=74.85 Aligned_cols=122 Identities=17% Similarity=0.085 Sum_probs=81.1
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCc------------------c--hHHhhhHHHHHHHHHhcCCC--CcccccccceeeE
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPH------------------E--SRVAKWRPYIQEIFNHLRNE--PFKKCVLLFKMNL 74 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~------------------~--~~~~~~~~~E~~il~~l~h~--~i~~~~~~~~v~~ 74 (334)
-||.|.+.+ |.++|||.=+.... + .......++|.++|++|... .+ .+-
T Consensus 106 dVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V--------P~P 176 (304)
T COG0478 106 DVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV--------PKP 176 (304)
T ss_pred eEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC--------CCc
Confidence 589888875 88999998664321 0 11122456799999998765 34 333
Q ss_pred EEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 75 YKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 75 ~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
+ +.++..+||||++|- +..+.. .......++. .|+.-+.-+-..| ++|+|
T Consensus 177 ~----~~nRHaVvMe~ieG~eL~~~r~------~~en~~~il~---~il~~~~~~~~~G----------------iVHGD 227 (304)
T COG0478 177 I----AWNRHAVVMEYIEGVELYRLRL------DVENPDEILD---KILEEVRKAYRRG----------------IVHGD 227 (304)
T ss_pred c----ccccceeeeehcccceeecccC------cccCHHHHHH---HHHHHHHHHHHcC----------------ccccC
Confidence 3 567889999999997 322211 1112222222 3333344333677 99999
Q ss_pred CCCCceeeCCCCCEEEEeccccc
Q psy6542 154 LKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~ 176 (334)
+.+=||+++++|.+.++||==+.
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred CchheEEEecCCCEEEEeCcccc
Confidence 99999999999999999997554
No 452
>KOG0606|consensus
Probab=98.30 E-value=2.4e-07 Score=94.85 Aligned_cols=231 Identities=16% Similarity=0.117 Sum_probs=137.1
Q ss_pred CCCceEEEeceeCCCCCcEEEEEeeCCCc-chHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 12 RVSKWRVKPPSLKPLGFPIQIGMLRHRPH-ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 12 ~~~~~~V~~a~~~~~~~~vAIK~l~~~~~-~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
+.+.-++..+.-..+|-..++|+..+... .....+....+-.++-.-++|-+ +..+..+......+++|+|
T Consensus 814 S~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v--------~~~~~s~~~rsP~~L~~~~ 885 (1205)
T KOG0606|consen 814 SGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAV--------VRSFPSFPCRSPLPLVGHY 885 (1205)
T ss_pred CCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCce--------ecccCCCCCCCCcchhhHH
Confidence 44555667777777776777777665443 11111122223334334445555 7666666677889999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEE
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRIS 170 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~ 170 (334)
.+|+.-.-+.+........... ..+..+..+++|||... +.|||++|.|+|...+|+.++.
T Consensus 886 ~~~~~~~Skl~~~~~~saepaR---s~i~~~vqs~e~L~s~~----------------r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSGCLSAEPAR---SPILERVQSLESLHSSL----------------RKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred hccCCchhhhhcCCCccccccc---chhHHHHhhhhccccch----------------hhcccccccchhhcccCCcccC
Confidence 9887211112211122222232 33348889999999998 9999999999999999999999
Q ss_pred ecccccccCCC---------------------------------CCCccccCccccccccc-cccCCcceeeh----hHH
Q psy6542 171 DLGLACDFSKK---------------------------------KPHASVESDCILHGYIK-KLGGPFVSAWQ----TRY 212 (334)
Q Consensus 171 DFGla~~~~~~---------------------------------~~~~~~~t~~~~~~~v~-~~~~~~~~~w~----~~~ 212 (334)
|||+....... ......||+-|..|+.. .......++|| +++
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhh
Confidence 99844321000 02244667888888873 44455667798 666
Q ss_pred HHHcCCCCCCCCCCCCCcccchhccccccccccc-ccHhHHHHHHHhhccCchhhcCCC
Q psy6542 213 AKLFPNRLELHPESGQSKPELIFMDQIEEVSQDL-ITVKGEQCVQLKLTRDTRIVLTNP 270 (334)
Q Consensus 213 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~~~p~~r~~~~ 270 (334)
+.+. +.+||........++-+....+....... ........+...+..++..|++..
T Consensus 1027 e~l~-g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1027 EVLT-GIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhc-CCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 7655 45577777666666666655443211111 111233334444455666666654
No 453
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.19 E-value=1.3e-05 Score=69.90 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=48.8
Q ss_pred CeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCcee
Q psy6542 82 NSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANIL 160 (334)
Q Consensus 82 ~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiL 160 (334)
...+++|||++|- +..+ ... .+ . +...+..++.-+|..| +.|+|..|.|++
T Consensus 116 ~~~~ll~EYIeG~~l~d~-----~~i---~e-~---~~~ki~~~ikqlH~~G----------------~~HGD~hpgNFl 167 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELNDI-----EDI---DE-D---LAEKIVEAIKQLHKHG----------------FYHGDPHPGNFL 167 (229)
T ss_pred eEEEEEEEEecCeecccc-----hhc---CH-H---HHHHHHHHHHHHHHcC----------------CccCCCCcCcEE
Confidence 3467899999997 3111 011 11 1 1226777889999999 999999999999
Q ss_pred eCCCCCEEEEecccccc
Q psy6542 161 LDEHGHVRISDLGLACD 177 (334)
Q Consensus 161 l~~~~~vkl~DFGla~~ 177 (334)
+++++ ++++||+-.+.
T Consensus 168 v~~~~-i~iID~~~k~~ 183 (229)
T PF06176_consen 168 VSNNG-IRIIDTQGKRM 183 (229)
T ss_pred EECCc-EEEEECccccc
Confidence 98655 99999987653
No 454
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.18 E-value=4.7e-05 Score=67.85 Aligned_cols=138 Identities=15% Similarity=0.103 Sum_probs=86.8
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCC-CcccccccceeeEEEEeecCCeEEEEEEccC
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNE-PFKKCVLLFKMNLYKVTSEPNSHYIIGVRQS 92 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~-~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~ 92 (334)
+...||++... +..+.||+..... ...+.+|+++++.+... .+ .+++++...++..++|||+++
T Consensus 11 ~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~v--------P~v~~~~~~~~~~~lv~e~i~ 75 (244)
T cd05150 11 SGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPV--------PEVIDYGSDDGRAWLLTSAVP 75 (244)
T ss_pred CcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCC--------CeEEEEEecCCccEEEEEeeC
Confidence 44677777653 3578888776432 22455699999888632 33 688887777677899999999
Q ss_pred CC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCC-c----------------------------------
Q psy6542 93 GP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKN-P---------------------------------- 136 (334)
Q Consensus 93 g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~-~---------------------------------- 136 (334)
|. +..... ..... .++.|+...|.-||+....+ +
T Consensus 76 G~~l~~~~~-------~~~~~---~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (244)
T cd05150 76 GVPAAALWE-------ELEPE---RLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWS 145 (244)
T ss_pred CccHhHhhc-------ccCHH---HHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCC
Confidence 97 321110 00111 12236666666666542111 0
Q ss_pred hhhhh-------hcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 137 LIAIF-------LTLSVPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 137 ~~~~~-------~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
+-.+. -+...|.++|+|+.|.|||+++++.+.|+||+.|.
T Consensus 146 ~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 146 AEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 00000 02245778999999999999998778999999875
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.16 E-value=1.5e-05 Score=78.40 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=31.2
Q ss_pred EEeeCCCCCceeeCCCCCEEEEecccccccCCCC
Q psy6542 149 LHFRDLKPANILLDEHGHVRISDLGLACDFSKKK 182 (334)
Q Consensus 149 iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~ 182 (334)
+.|.|..|-||+++.+|.+.+.|||+...+....
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~ 319 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKF 319 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCHHH
Confidence 9999999999999999999999999998776653
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.16 E-value=6.4e-05 Score=66.46 Aligned_cols=139 Identities=9% Similarity=-0.071 Sum_probs=84.1
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCC--cccccccceeeEEEEeecCCeEEEEEEc
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEP--FKKCVLLFKMNLYKVTSEPNSHYIIGVR 90 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~--i~~~~~~~~v~~~~~~~~~~~~~ivmEy 90 (334)
|..-.||+. .|..+++|....... .....+|.++++.+..-. + .+.+++....+..++|||+
T Consensus 12 G~t~~~y~~----~~~~~VlR~~~~~~~----~~~i~~E~~~l~~l~~~glpv--------P~~~~~~~~~~~~glv~e~ 75 (226)
T TIGR02172 12 GGNGESYTH----KTGKWMLKLYNPGFD----KETIKREFDASRKVFSLGIPT--------PHPFDLVEDGGRLGLIYEL 75 (226)
T ss_pred CCCcceeEe----cCCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHcCCCC--------CceEEEEecCCeeeeeeee
Confidence 334466653 255677887764332 223567999999886432 4 6778888888888999999
Q ss_pred cCCC--hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc------------------hh----h-hh----
Q psy6542 91 QSGP--KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNP------------------LI----A-IF---- 141 (334)
Q Consensus 91 ~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~------------------~~----~-~~---- 141 (334)
++|. ....... ...... .+..+++..+.-||+....+. .+ . +.
T Consensus 76 i~G~~~~~~~~~~-----~~~~~~---~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~ 147 (226)
T TIGR02172 76 IVGKRSFSRIISD-----NPSRLE---EIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIK 147 (226)
T ss_pred cCCccchhhhhcC-----CHHHHH---HHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 9996 2111110 011111 122355555666665321110 00 0 00
Q ss_pred hcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 142 LTLSVPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 142 ~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.-...+.++|+|+.|.||++++++ +.++||+.+.
T Consensus 148 ~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 148 EVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred hCCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 012456678999999999999988 9999999875
No 457
>KOG1235|consensus
Probab=98.01 E-value=3.7e-05 Score=75.48 Aligned_cols=140 Identities=18% Similarity=0.181 Sum_probs=82.5
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCc-----------------------------chHHhhhHHHHHHH----------
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPH-----------------------------ESRVAKWRPYIQEI---------- 54 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~-----------------------------~~~~~~~~~~E~~i---------- 54 (334)
|-.+|++|+.+. |+.||||+-++.-. -++..+.+..|++.
T Consensus 173 SlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~ 251 (538)
T KOG1235|consen 173 SLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERF 251 (538)
T ss_pred chhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHH
Confidence 456999999998 99999999876421 12222333333332
Q ss_pred HHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC----hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy6542 55 FNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP----KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS 130 (334)
Q Consensus 55 l~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~----l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~ 130 (334)
.+.++|-+... -.-+.++|..+. ..-.++||||+|. ++.+....+... .+..-+.+... .-+-.
T Consensus 252 ~~~f~~~~~~~--~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~gi~~~------~i~~~l~~~~~--~qIf~ 319 (538)
T KOG1235|consen 252 RENFKDFSLLT--YVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRGISPH------DILNKLVEAYL--EQIFK 319 (538)
T ss_pred HHHHHhccccc--ceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHcCCCHH------HHHHHHHHHHH--HHHHh
Confidence 22344444100 001144454433 3457899999997 455545443222 22221112222 22234
Q ss_pred CCCCCchhhhhhcCCCCcEEeeCCCCCceeeCC----CCCEEEEecccccccCCCC
Q psy6542 131 ALNKNPLIAIFLTLSVPCLHFRDLKPANILLDE----HGHVRISDLGLACDFSKKK 182 (334)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~----~~~vkl~DFGla~~~~~~~ 182 (334)
.| ++|.|-.|-||++.. ++.+.+.|||+........
T Consensus 320 ~G----------------ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~ 359 (538)
T KOG1235|consen 320 TG----------------FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT 359 (538)
T ss_pred cC----------------CccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence 55 999999999999984 5679999999998766554
No 458
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.94 E-value=0.00021 Score=62.45 Aligned_cols=70 Identities=10% Similarity=-0.018 Sum_probs=45.7
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee---cCCeEEEEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS---EPNSHYIIGV 89 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~---~~~~~~ivmE 89 (334)
+..-+||+..... ..+++|..... .....+.+|..+++.+....+ - +.+++.... .....+++|+
T Consensus 8 G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~---p---vP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 8 GFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGI---P---VPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp SSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTS---B---S--EEEEEEETEETSEEEEEEE
T ss_pred CCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCC---C---CceEEeecccccccccceEEEE
Confidence 3445788887766 38999987643 244566779999888864432 0 145555332 3445799999
Q ss_pred ccCCC
Q psy6542 90 RQSGP 94 (334)
Q Consensus 90 y~~g~ 94 (334)
+++|.
T Consensus 76 ~i~g~ 80 (239)
T PF01636_consen 76 YIPGR 80 (239)
T ss_dssp EESSE
T ss_pred Eeccc
Confidence 99998
No 459
>PRK09902 hypothetical protein; Provisional
Probab=97.94 E-value=6e-05 Score=65.40 Aligned_cols=111 Identities=9% Similarity=0.001 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecC--CeEEEEEEccCCC--hhHHhhh-hhhhhhHHHHHHHHHHHH
Q psy6542 45 AKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEP--NSHYIIGVRQSGP--KDQISRS-KINRYHKKLRKCFIRRTV 119 (334)
Q Consensus 45 ~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~--~~~~ivmEy~~g~--l~~l~~~-~~~~~~~~~~~~~~~i~~ 119 (334)
...|.+|+..++.|..-++. .+-.+ +.+....+ ..-+||+|-++|- ++.+... .....+..... .++.
T Consensus 63 ~ptf~rE~~~L~~L~~~GvP---VP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~---~il~ 135 (216)
T PRK09902 63 RPTIVREVAVIKELERAGVI---VPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQ---AMLK 135 (216)
T ss_pred chHHHHHHHHHHHHHHcCCC---CCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHH---HHHH
Confidence 34677899999999876651 12223 33333222 3468999999876 4444332 22222222223 3445
Q ss_pred HHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCC--EEEEeccccccc
Q psy6542 120 QLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGH--VRISDLGLACDF 178 (334)
Q Consensus 120 qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~--vkl~DFGla~~~ 178 (334)
+++..+.-||+.+ +.|+|+-+.||+++.+|. ++++||--++..
T Consensus 136 ~va~~ia~LH~~G----------------v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 136 AVALAFKKMHSVN----------------RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHHCC----------------CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 9999999999999 999999999999987777 999999977643
No 460
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.82 E-value=0.0003 Score=62.20 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=26.6
Q ss_pred CcEEeeCCCCCceeeCC-CCCEEEEeccccc
Q psy6542 147 PCLHFRDLKPANILLDE-HGHVRISDLGLAC 176 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~-~~~vkl~DFGla~ 176 (334)
+.++|+|+.+.|||++. ++.+.++||-.|.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 45889999999999998 5789999999875
No 461
>PLN02876 acyl-CoA dehydrogenase
Probab=97.69 E-value=0.00069 Score=71.09 Aligned_cols=152 Identities=11% Similarity=-0.038 Sum_probs=83.5
Q ss_pred ceEEEeceeCCCC--CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcC-CCCcccccccceeeEEEEeecC---CeEEEEE
Q psy6542 15 KWRVKPPSLKPLG--FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLR-NEPFKKCVLLFKMNLYKVTSEP---NSHYIIG 88 (334)
Q Consensus 15 ~~~V~~a~~~~~~--~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~-h~~i~~~~~~~~v~~~~~~~~~---~~~~ivm 88 (334)
+-.+|+......+ ..+++|+........ ....+.+|+++|+.+. |+++ -+.+.+.++.+. +..|+||
T Consensus 51 sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~v------pVP~v~~~~~d~~v~G~~flVM 123 (822)
T PLN02876 51 SNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDV------PVPKVYCLCTDASVIGTAFYIM 123 (822)
T ss_pred cCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCC------CCCcEEEEecCCCcCCCceEEE
Confidence 3355555443322 356667654332211 1235678999999996 6553 116777776654 4678999
Q ss_pred EccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC-------Cc--------h----------------
Q psy6542 89 VRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNK-------NP--------L---------------- 137 (334)
Q Consensus 89 Ey~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-------~~--------~---------------- 137 (334)
||++|..- .........+ .....+..|++.+|..||..... +. +
T Consensus 124 E~v~G~~~--~~~~~~~~~~---~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~ 198 (822)
T PLN02876 124 EYLEGRIF--VDPKLPGVAP---ERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKP 198 (822)
T ss_pred EecCCccc--CCccCCCCCH---HHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCC
Confidence 99998720 0000001111 11123334677777777763210 00 0
Q ss_pred ---h---hhhhcC----C-------CCcEEeeCCCCCceeeCCC-CC-EEEEeccccccc
Q psy6542 138 ---I---AIFLTL----S-------VPCLHFRDLKPANILLDEH-GH-VRISDLGLACDF 178 (334)
Q Consensus 138 ---~---~~~~~~----~-------~~~iiHrDlKp~NiLl~~~-~~-vkl~DFGla~~~ 178 (334)
+ .+.-|. . .+.++|+|+++.|+|++.+ +. +-|.||.++..-
T Consensus 199 ~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 199 PRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 0 000011 1 2569999999999999853 34 579999998743
No 462
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.69 E-value=0.00017 Score=61.83 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=76.1
Q ss_pred HHHHHHHHhcCC-CCcccccccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy6542 49 PYIQEIFNHLRN-EPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVH 126 (334)
Q Consensus 49 ~~E~~il~~l~h-~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~ 126 (334)
..|.-+++.+.+ +++ .+++|++- -++|+||...+ +..+ ......+........+.++.|++..+.
T Consensus 7 ~~E~lll~~l~~~~~~--------pk~lG~CG----~~~v~E~~~~~~~~~~-~~~l~~~~~~~w~~R~~iA~~lL~~l~ 73 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPF--------PKLLGSCG----RFYVVEYVGAGSLYGI-YRPLSQFLQSPWEQRAKIALQLLELLE 73 (188)
T ss_pred ccHHHHHHHcCCCCCC--------CCeeeECC----CEEEEEeecCcccccc-ccccccccccCHHHHHHHHHHHHHHHH
Confidence 358889999987 578 99999982 36689999865 2111 111122233355566788889999999
Q ss_pred HhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccccccc
Q psy6542 127 TCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDF 178 (334)
Q Consensus 127 yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~ 178 (334)
++++... + + +.-.|++|+|+-+++++.+|++|...+...
T Consensus 74 ~l~~~~~-~-----------~-~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 74 ELDHGPL-G-----------F-FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHhcCCC-C-----------c-EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 9988431 1 1 778999999999999999999999987644
No 463
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.67 E-value=0.00048 Score=61.88 Aligned_cols=133 Identities=14% Similarity=0.050 Sum_probs=75.4
Q ss_pred eEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-
Q psy6542 16 WRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP- 94 (334)
Q Consensus 16 ~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~- 94 (334)
..+|+.. .+|..+.+|........ ..-...+|.++++.+....+ . .+++.... -++||||++|.
T Consensus 10 n~~y~~~--~~~~~~vlR~~~~~~~~--~~~~r~~E~~~l~~l~~~g~----~---P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 10 NRSWRIE--HPGISFVWRPQSPVCKA--LGVDRQREYQILQALSALGL----A---PKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCeEEEE--eCCccEEEeeCCccccc--ccCcHHHHHHHHHHHHhcCC----C---CceEEEeC----CEEEEEeccCcc
Confidence 3455544 34667888875533211 11234669999999875443 1 34443332 26899999996
Q ss_pred hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCch--------------------------hhhhhcC----
Q psy6542 95 KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPL--------------------------IAIFLTL---- 144 (334)
Q Consensus 95 l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~--------------------------~~~~~~~---- 144 (334)
.+.- . .. .. ..+.+++..|.-||+....+.. ...+...
T Consensus 75 ~~~~---~---~~--~~----~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T TIGR02721 75 ITLD---Q---FV--AL----DLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPA 142 (256)
T ss_pred cccc---c---cc--Cc----hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCC
Confidence 2110 0 00 00 1123566666666654322110 0001111
Q ss_pred -CCCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 145 -SVPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 145 -~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
..+.++|+|+.|.||+++.++ +.|+||..|.
T Consensus 143 ~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 143 PLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred CCCCeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence 134689999999999999877 7899999875
No 464
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=97.66 E-value=0.00041 Score=65.51 Aligned_cols=128 Identities=13% Similarity=0.061 Sum_probs=95.0
Q ss_pred eEEEEEEccCCC--hhHHhh--hhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCc
Q psy6542 83 SHYIIGVRQSGP--KDQISR--SKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPAN 158 (334)
Q Consensus 83 ~~~ivmEy~~g~--l~~l~~--~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~N 158 (334)
.+-+.|..+.|- ...+.. ....+++.....+++.....++.+..-||..| .+-+|+.++|
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G----------------h~vGDVn~~~ 147 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG----------------HVVGDVNQNS 147 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC----------------CcccccCccc
Confidence 478889888886 222212 22345666678888889999999999999999 8899999999
Q ss_pred eeeCCCCCEEEEecccccccCCCCC-CccccCcccccccccccc-------CCcceeeh---hHHHHHcCCCCCCCCCC
Q psy6542 159 ILLDEHGHVRISDLGLACDFSKKKP-HASVESDCILHGYIKKLG-------GPFVSAWQ---TRYAKLFPNRLELHPES 226 (334)
Q Consensus 159 iLl~~~~~vkl~DFGla~~~~~~~~-~~~~~t~~~~~~~v~~~~-------~~~~~~w~---~~~~~l~~~~~~~~~~~ 226 (334)
+|+++++.|.|.|=..-.....+.. ....|.+.|+|||....+ ....|.+- ++|+++++++-||.|..
T Consensus 148 ~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~ 226 (637)
T COG4248 148 FLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP 226 (637)
T ss_pred eeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence 9999999999998555444334332 346788999999984422 23444454 88999999999987764
No 465
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.64 E-value=0.0009 Score=57.85 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=77.8
Q ss_pred CCCCCcEEEEEeeCCCc--------------chHHhhhHHHHHHHHHhcC------CCCcccccccceeeEEEEeecCCe
Q psy6542 24 KPLGFPIQIGMLRHRPH--------------ESRVAKWRPYIQEIFNHLR------NEPFKKCVLLFKMNLYKVTSEPNS 83 (334)
Q Consensus 24 ~~~~~~vAIK~l~~~~~--------------~~~~~~~~~~E~~il~~l~------h~~i~~~~~~~~v~~~~~~~~~~~ 83 (334)
...+....||+.++... .....+...+|+.....+. +.+| .++|++.+++..
T Consensus 20 HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i--------~r~~G~veT~~G 91 (199)
T PF10707_consen 20 HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHI--------PRFYGFVETNLG 91 (199)
T ss_pred CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccc--------ccEeEEEecCCc
Confidence 34456678999987761 1123456677888877777 5566 999999999999
Q ss_pred EEEEEEccCC---C----hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCC
Q psy6542 84 HYIIGVRQSG---P----KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKP 156 (334)
Q Consensus 84 ~~ivmEy~~g---~----l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp 156 (334)
.-+|+|.+.. . ++.+.... .+.. .+.. .+-.-..||-+.. |+.+|++|
T Consensus 92 ~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~----~~~~---~L~~f~~~l~~~~----------------Iv~~dl~~ 146 (199)
T PF10707_consen 92 LGLVVELIRDADGNISPTLEDYLKEG--GLTE----ELRQ---ALDEFKRYLLDHH----------------IVIRDLNP 146 (199)
T ss_pred eEEEEEEEECCCCCcCccHHHHHHcC--CccH----HHHH---HHHHHHHHHHHcC----------------CeecCCCc
Confidence 9999997633 2 33332221 1211 2222 3333445777777 99999999
Q ss_pred CceeeCCC--C--CEEEEe-cccc
Q psy6542 157 ANILLDEH--G--HVRISD-LGLA 175 (334)
Q Consensus 157 ~NiLl~~~--~--~vkl~D-FGla 175 (334)
.||++... + .+.|+| ||-.
T Consensus 147 ~NIv~~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 147 HNIVVQRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred ccEEEEecCCCceEEEEEeCCCCc
Confidence 99999544 2 477888 6643
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.59 E-value=0.00093 Score=59.22 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=26.7
Q ss_pred CCCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 145 SVPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 145 ~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
..+.++|+|+.+.||++++++...|+||+.|.
T Consensus 162 ~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 162 GPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred CCceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 34558999999999999876656799999875
No 467
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.53 E-value=0.00087 Score=61.67 Aligned_cols=32 Identities=28% Similarity=0.314 Sum_probs=27.8
Q ss_pred CCCcEEeeCCCCCceeeCCC----CCEEEEeccccc
Q psy6542 145 SVPCLHFRDLKPANILLDEH----GHVRISDLGLAC 176 (334)
Q Consensus 145 ~~~~iiHrDlKp~NiLl~~~----~~vkl~DFGla~ 176 (334)
....++|.|+.|.|||++++ +.+.++||..|.
T Consensus 177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 44568899999999999985 889999999875
No 468
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.50 E-value=0.001 Score=58.97 Aligned_cols=134 Identities=13% Similarity=0.036 Sum_probs=81.8
Q ss_pred eEEEeceeCCCCCcEEEEEeeCCCc----------------------chHHhhhHHHHHHHHHhcCCCCcccccccceee
Q psy6542 16 WRVKPPSLKPLGFPIQIGMLRHRPH----------------------ESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMN 73 (334)
Q Consensus 16 ~~V~~a~~~~~~~~vAIK~l~~~~~----------------------~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~ 73 (334)
-.||+|.. ..+..||+|+.+.... ......+...|+.-|+++....+ -+.+
T Consensus 62 A~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV------rvP~ 134 (268)
T COG1718 62 ANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV------RVPE 134 (268)
T ss_pred eEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC------CCCC
Confidence 47999876 3488999999875432 01111245567777777655443 0022
Q ss_pred EEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCchhhhhhcCCCCcEEe
Q psy6542 74 LYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHS-ALNKNPLIAIFLTLSVPCLHF 151 (334)
Q Consensus 74 ~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~-~~~~~~~~~~~~~~~~~~iiH 151 (334)
-+.+. .-.+||||++.. .-.-.........+ ....+.. +++..+.-|-. .+ ++|
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~~e~~-e~~~~~~---~~v~~~~~l~~~a~----------------LVH 190 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLPAPRLKDVPLELE-EAEGLYE---DVVEYMRRLYKEAG----------------LVH 190 (268)
T ss_pred ceeec----CCeEEEEeccCCCCCCCCcccCCcCch-hHHHHHH---HHHHHHHHHHHhcC----------------ccc
Confidence 23222 347899998766 21111111111111 1222333 66676766655 77 999
Q ss_pred eCCCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 152 RDLKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 152 rDlKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
+||..=|||+. ++.+.++|||=|......
T Consensus 191 gDLSEyNiL~~-~~~p~iID~~QaV~~~hp 219 (268)
T COG1718 191 GDLSEYNILVH-DGEPYIIDVSQAVTIDHP 219 (268)
T ss_pred ccchhhheEEE-CCeEEEEECccccccCCC
Confidence 99999999999 788999999988766544
No 469
>PLN02236 choline kinase
Probab=97.36 E-value=0.0025 Score=59.95 Aligned_cols=136 Identities=13% Similarity=0.029 Sum_probs=76.5
Q ss_pred eEEEeceeC----CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 16 WRVKPPSLK----PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 16 ~~V~~a~~~----~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
-++|++... .+++.|.+|+...... ..-...+|..+++.+...++ ..++++.+..+ .|.||+
T Consensus 50 N~~y~v~~~~~~~~~~~~~v~Ri~g~~t~---~~idR~~E~~~~~~l~~~gl-------~P~~~~~~~~g----~v~efi 115 (344)
T PLN02236 50 NEVFQIKWPTKEGNLGRKVLVRIYGEGVE---LFFDRDDEIRTFECMSRHGQ-------GPRLLGRFPNG----RVEEFI 115 (344)
T ss_pred ceeEEEEeCCCCCCCCCeEEEEEccCCCC---eeechHHHHHHHHHHHHcCC-------CCceEEEECCc----eEEEee
Confidence 356665422 2356788887765432 11123569999999876665 25666666432 479999
Q ss_pred CCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCch-hh------------------------------
Q psy6542 92 SGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPL-IA------------------------------ 139 (334)
Q Consensus 92 ~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~-~~------------------------------ 139 (334)
+|. ++.- .. ... .+..+++..|.-+|+...+++. +.
T Consensus 116 ~g~~l~~~---~l------~~~---~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~ 183 (344)
T PLN02236 116 HARTLSAA---DL------RDP---EISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLE 183 (344)
T ss_pred CCCCCCHH---Hc------CCh---HHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHH
Confidence 775 2110 00 000 0112444555555543321110 00
Q ss_pred ---------hhhcCCCCcEEeeCCCCCceeeCC-CCCEEEEecccccc
Q psy6542 140 ---------IFLTLSVPCLHFRDLKPANILLDE-HGHVRISDLGLACD 177 (334)
Q Consensus 140 ---------~~~~~~~~~iiHrDlKp~NiLl~~-~~~vkl~DFGla~~ 177 (334)
+........++|+|+++.|||+++ ++.+.++||..|..
T Consensus 184 ~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 184 DEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 001122346789999999999986 46799999998863
No 470
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.26 E-value=0.0057 Score=56.65 Aligned_cols=146 Identities=16% Similarity=0.054 Sum_probs=85.6
Q ss_pred ceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCC--CcccccccceeeEEEEeecCC--eEEEEEEc
Q psy6542 15 KWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNE--PFKKCVLLFKMNLYKVTSEPN--SHYIIGVR 90 (334)
Q Consensus 15 ~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~--~i~~~~~~~~v~~~~~~~~~~--~~~ivmEy 90 (334)
+=.+|..... ++.+.+. ...............+|..+++.+.-- .+ ...++.+.++. ..|.||+|
T Consensus 38 sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~--------p~~~~~~~~~~~g~pf~v~~~ 106 (321)
T COG3173 38 SNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPV--------PRAFGLCGEGYLGTPFYVMEW 106 (321)
T ss_pred ccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCC--------cccccccccCCCCCceEEEEE
Confidence 3344444433 6777777 221112222333455688888877542 23 56666776655 67999999
Q ss_pred cCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC--------CC----c----------------------
Q psy6542 91 QSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALN--------KN----P---------------------- 136 (334)
Q Consensus 91 ~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~--------~~----~---------------------- 136 (334)
++|..- ......... ...+.. ..+...|.-||+-.. .+ +
T Consensus 107 veGe~~---~~~~~~~~~-~~~~~~---~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~ 179 (321)
T COG3173 107 VEGEVV---WSALPPESL-GRQFAL---DALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL 179 (321)
T ss_pred ecceec---cCcCCcccc-hHHHHH---HHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence 999510 000000000 111111 266667777775210 00 0
Q ss_pred -------hhhhhh-cCCCCcEEeeCCCCCceeeCCCCCEEEEeccccccc
Q psy6542 137 -------LIAIFL-TLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDF 178 (334)
Q Consensus 137 -------~~~~~~-~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~ 178 (334)
+.+.-. +...|+++|+|+.+.|++++..+-+-|+||+++..-
T Consensus 180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 122222 788899999999999999999999999999998643
No 471
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.16 E-value=0.004 Score=58.24 Aligned_cols=126 Identities=13% Similarity=0.101 Sum_probs=72.9
Q ss_pred CCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhh
Q psy6542 27 GFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINR 105 (334)
Q Consensus 27 ~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~ 105 (334)
+..|.+|+...... ..-...+|..+++.+...++ ..++++++. ++ +|.+|++|. ++. ...
T Consensus 42 ~~~~v~Ri~g~~t~---~~IdR~~E~~il~~l~~~gl-------~P~~l~~~~-~G---~i~~fi~g~~l~~---~~l-- 102 (330)
T PLN02421 42 EVSVTVRLFGPNTD---YVIDRERELQAIKYLSAAGF-------GAKLLGVFG-NG---MIQSFINARTLTP---SDM-- 102 (330)
T ss_pred CceEEEEEecCCcC---eEechHHHHHHHHHHHhcCC-------CCceeEEeC-Cc---EeehhhcCCCCCh---HHC--
Confidence 34788887765432 11223459999999887665 246666653 22 588999776 211 000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhh-------------------------------------------hh
Q psy6542 106 YHKKLRKCFIRRTVQLLEPVHTCHSALNKNP-LIA-------------------------------------------IF 141 (334)
Q Consensus 106 ~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~-~~~-------------------------------------------~~ 141 (334)
. .. . .+.+++..|..||+..-++. .+. +.
T Consensus 103 -~--~~-~---~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 103 -R--KP-K---VAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred -C--CH-H---HHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 0 00 1 12266666777776432111 000 00
Q ss_pred hc-CCCCcEEeeCCCCCceeeCC-CCCEEEEeccccccc
Q psy6542 142 LT-LSVPCLHFRDLKPANILLDE-HGHVRISDLGLACDF 178 (334)
Q Consensus 142 ~~-~~~~~iiHrDlKp~NiLl~~-~~~vkl~DFGla~~~ 178 (334)
.. ....++.|.|+-+.|||+++ ++.++++||..|..-
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 01 12235679999999999975 478999999998643
No 472
>KOG0576|consensus
Probab=97.13 E-value=0.00039 Score=68.74 Aligned_cols=152 Identities=13% Similarity=0.103 Sum_probs=99.2
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCC-cccccccceeeEEEEeecCCeEEEEEEccCCC-
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEP-FKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP- 94 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~-i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~- 94 (334)
++++.+...+...+ .+.+... .. ..-++++|.+++||| . +..++-++...+.+|+|+|+.++
T Consensus 257 knpKkRptaeklL~-h~fvs~~-----l~--~rl~~eLLdK~n~P~~~--------v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 257 KNPKKRPTAEKLLQ-HPFVSQT-----LS--RRLAIELLDKVNNPNPV--------VRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred CCCccCCChhhhee-ceeeccc-----hh--hHHHHHHHHHccCCCCc--------ccccccCCcccccchhhhhhcCCc
Confidence 55555544444443 4444432 11 223889999999999 6 78888888888999999999988
Q ss_pred hhHHhhhhhhhhhHHH--HHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEec
Q psy6542 95 KDQISRSKINRYHKKL--RKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDL 172 (334)
Q Consensus 95 l~~l~~~~~~~~~~~~--~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DF 172 (334)
.-.... ...+.. .-.+..++..-+.+|+|+|+-. =+||| ||+..+ +.++..||
T Consensus 321 s~~~~~----~~se~~~~~~~~~~~~r~et~~l~~l~~~~----------------~~~~d----~~l~s~-~~~~~~~~ 375 (829)
T KOG0576|consen 321 SSALEM----TVSEIALEQYQFAYPLRKETRPLAELHSSY----------------KVHRD----NILGSE-EEVKLLDF 375 (829)
T ss_pred cccccC----ChhhHhhhhhhhhhhhhhhccccccccccc----------------ccCcc----cccccc-cccccccc
Confidence 211101 111111 1122334456788999999875 58998 777655 77999999
Q ss_pred ccccccCCCC-CCccccCcccccccccccc--CCcceeeh
Q psy6542 173 GLACDFSKKK-PHASVESDCILHGYIKKLG--GPFVSAWQ 209 (334)
Q Consensus 173 Gla~~~~~~~-~~~~~~t~~~~~~~v~~~~--~~~~~~w~ 209 (334)
+.+..+.... ..+..+++..++|++.... ....+.|+
T Consensus 376 ~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~ 415 (829)
T KOG0576|consen 376 AVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGS 415 (829)
T ss_pred cCCcccCcccccccCCCCCCCCCchhhcccccccCCCccC
Confidence 9998877664 4556789999999974322 22444555
No 473
>PRK10593 hypothetical protein; Provisional
Probab=96.94 E-value=0.025 Score=52.07 Aligned_cols=68 Identities=13% Similarity=0.002 Sum_probs=43.6
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCC---CcccccccceeeEEEEeec---CCeEEE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNE---PFKKCVLLFKMNLYKVTSE---PNSHYI 86 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~---~i~~~~~~~~v~~~~~~~~---~~~~~i 86 (334)
+....||...... | .+.+|..+... ....+.+|.+.++.|... .+ .+.++++.. .+.-+|
T Consensus 25 G~~~~vy~~~~~~-~-~~~~k~~~~~~----~~~~~~~Ea~~L~~L~~~~~vpV--------P~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 25 QPYAALWALYDSQ-G-NPMPLMARSFS----TPGVAQQEAWKLSMLARSGTVRM--------PTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred ccceeEEEEEcCC-C-CEEEEEecccc----cchHHHHHHHHHHHHccCCCCCc--------CcEEEEeccCCcCCCeEE
Confidence 3344666654322 3 56777744211 123567799999988642 45 788877653 466899
Q ss_pred EEEccCCC
Q psy6542 87 IGVRQSGP 94 (334)
Q Consensus 87 vmEy~~g~ 94 (334)
|||+++|.
T Consensus 91 VmE~i~G~ 98 (297)
T PRK10593 91 LLERLRGV 98 (297)
T ss_pred EEeccCCE
Confidence 99999986
No 474
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.72 E-value=0.01 Score=54.35 Aligned_cols=60 Identities=5% Similarity=-0.177 Sum_probs=35.4
Q ss_pred CCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC
Q psy6542 25 PLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP 94 (334)
Q Consensus 25 ~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~ 94 (334)
.+++.+.||+-.. .....+..|.+-|+.|...+- ..+.+.+.+....+.-|+||||++.+
T Consensus 38 ~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~-----~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 38 TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANP-----IRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTT-----SBS--EEEEEE-SSCCEEEEE-----
T ss_pred CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCC-----CCCCeEEEEEeecCCceEEEEeecCC
Confidence 6678899998772 123466779998888843221 01278888888777779999998766
No 475
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.68 E-value=0.015 Score=49.04 Aligned_cols=119 Identities=17% Similarity=0.110 Sum_probs=72.9
Q ss_pred eEEEeceeCCCCCcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCC-
Q psy6542 16 WRVKPPSLKPLGFPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGP- 94 (334)
Q Consensus 16 ~~V~~a~~~~~~~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~- 94 (334)
-.||++.-. |..+|+|+-+.++. ...+..|++++..+...++ -.++|.+.. .++.|||++|-
T Consensus 36 s~Vyl~~~~--~~~~a~Kvrr~ds~----r~~l~kEakiLeil~g~~~-------~p~vy~yg~----~~i~me~i~G~~ 98 (201)
T COG2112 36 SVVYLGEWR--GGEVALKVRRRDSP----RRNLEKEAKILEILAGEGV-------TPEVYFYGE----DFIRMEYIDGRP 98 (201)
T ss_pred cEEEEeecc--CceEEEEEecCCcc----hhhHHHHHHHHHHhhhcCC-------CceEEEech----hhhhhhhhcCcc
Confidence 367776543 56899998885543 4456779999999998876 245665543 34559999996
Q ss_pred hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCC-CCceeeCCCCCEEEEecc
Q psy6542 95 KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLK-PANILLDEHGHVRISDLG 173 (334)
Q Consensus 95 l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlK-p~NiLl~~~~~vkl~DFG 173 (334)
+....... ..+.+. .++..---|-..| |-|..|. |...++.+++.+-|+||-
T Consensus 99 L~~~~~~~-------~rk~l~----~vlE~a~~LD~~G----------------I~H~El~~~~k~vlv~~~~~~iIDFd 151 (201)
T COG2112 99 LGKLEIGG-------DRKHLL----RVLEKAYKLDRLG----------------IEHGELSRPWKNVLVNDRDVYIIDFD 151 (201)
T ss_pred hhhhhhcc-------cHHHHH----HHHHHHHHHHHhc----------------cchhhhcCCceeEEecCCcEEEEEcc
Confidence 43221110 112222 3333333344455 7676664 444444455589999999
Q ss_pred ccccc
Q psy6542 174 LACDF 178 (334)
Q Consensus 174 la~~~ 178 (334)
.|+.-
T Consensus 152 ~At~k 156 (201)
T COG2112 152 SATFK 156 (201)
T ss_pred chhhc
Confidence 99733
No 476
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.64 E-value=0.019 Score=52.48 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=26.5
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
..++|+|+.|.|+|+++++.+.|+||+.|.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 348999999999999998777999999875
No 477
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.59 E-value=0.0016 Score=66.79 Aligned_cols=74 Identities=9% Similarity=-0.005 Sum_probs=48.9
Q ss_pred eeCCCCC-ceeeCCCCCEEEEecccccccCCCC----CCccccCccccccccc-cccCC-cceeeh---hHHHHHcCCCC
Q psy6542 151 FRDLKPA-NILLDEHGHVRISDLGLACDFSKKK----PHASVESDCILHGYIK-KLGGP-FVSAWQ---TRYAKLFPNRL 220 (334)
Q Consensus 151 HrDlKp~-NiLl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~~~~~~v~-~~~~~-~~~~w~---~~~~~l~~~~~ 220 (334)
+++.+|. |++++..+.+++.|||.++...... .....||+.|++||+. ...+. .+|+|+ ++|+++. +.+
T Consensus 500 ~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ellt-G~~ 578 (669)
T cd05610 500 TQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLT-GIP 578 (669)
T ss_pred CCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHH-CCC
Confidence 4566666 6666767777899999988654332 2345789999999974 33344 455555 6666655 566
Q ss_pred CCCCC
Q psy6542 221 ELHPE 225 (334)
Q Consensus 221 ~~~~~ 225 (334)
||.+.
T Consensus 579 pf~~~ 583 (669)
T cd05610 579 PFNDE 583 (669)
T ss_pred CCCCC
Confidence 77554
No 478
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.54 E-value=0.12 Score=49.49 Aligned_cols=72 Identities=10% Similarity=-0.116 Sum_probs=45.5
Q ss_pred CCceEEEeceeCCCCCcEEEEEeeCCCc---c--hHHhhhHHHHHHHHHhcC---CCCcccccccceeeEEEEeecCCeE
Q psy6542 13 VSKWRVKPPSLKPLGFPIQIGMLRHRPH---E--SRVAKWRPYIQEIFNHLR---NEPFKKCVLLFKMNLYKVTSEPNSH 84 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~~~vAIK~l~~~~~---~--~~~~~~~~~E~~il~~l~---h~~i~~~~~~~~v~~~~~~~~~~~~ 84 (334)
+..--||.+.....++.|.||.-..... + .....+...|.+.|+.+. ..++ .+++.+. .+..
T Consensus 37 Gn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~V--------PkV~~~D--~~~~ 106 (401)
T PRK09550 37 GNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLV--------PKVYHYD--EELA 106 (401)
T ss_pred CceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCC--------CeEEEEC--CCCC
Confidence 3344778888765446899998542211 1 112345667888888763 2345 7777663 3557
Q ss_pred EEEEEccCCC
Q psy6542 85 YIIGVRQSGP 94 (334)
Q Consensus 85 ~ivmEy~~g~ 94 (334)
++||||+++.
T Consensus 107 ~lVME~L~~~ 116 (401)
T PRK09550 107 VTVMEDLSDH 116 (401)
T ss_pred EEEEecCCCc
Confidence 8999999875
No 479
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.44 E-value=0.011 Score=51.40 Aligned_cols=29 Identities=34% Similarity=0.659 Sum_probs=20.5
Q ss_pred cEEeeCCCCCceee-CCCCCEEEEeccccc
Q psy6542 148 CLHFRDLKPANILL-DEHGHVRISDLGLAC 176 (334)
Q Consensus 148 ~iiHrDlKp~NiLl-~~~~~vkl~DFGla~ 176 (334)
++.|.|+.|.|||+ +.++.++++||-.|.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 46799999999999 888999999999875
No 480
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.09 E-value=0.017 Score=54.14 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=49.5
Q ss_pred cCCeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 80 EPNSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 80 ~~~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
++.+.|++|++-.+.+..+...+ .+....++.+.+.-+.-+..+- ++-|||+...||
T Consensus 297 e~~y~yl~~kdhgt~is~ik~~~--------~~e~lsff~s~~sil~~lekkf---------------~fehrnlt~~ni 353 (488)
T COG5072 297 ETLYLYLHFKDHGTPISIIKADR--------SEEELSFFWSCISILDILEKKF---------------PFEHRNLTLDNI 353 (488)
T ss_pred CceEEEEEEecCCceeeeeeccc--------HHHHHHHHHHHHHHHhhhhhcC---------------Ccccccccccce
Confidence 44567889998877754332221 1222333335555444444433 378999999999
Q ss_pred eeCCCCCEEEEecccccc
Q psy6542 160 LLDEHGHVRISDLGLACD 177 (334)
Q Consensus 160 Ll~~~~~vkl~DFGla~~ 177 (334)
||+ +|.|.|+||-++|.
T Consensus 354 LId-~GnvtLIDfklsRl 370 (488)
T COG5072 354 LID-EGNVTLIDFKLSRL 370 (488)
T ss_pred eee-cCceEEEEeeeeec
Confidence 999 89999999999993
No 481
>KOG2137|consensus
Probab=95.77 E-value=0.0092 Score=59.66 Aligned_cols=132 Identities=8% Similarity=0.124 Sum_probs=74.3
Q ss_pred HHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCC-----------CCcccc
Q psy6542 120 QLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKK-----------PHASVE 188 (334)
Q Consensus 120 qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~-----------~~~~~~ 188 (334)
+++.||.|+|..-+ +||++|.|++|.++..|..||+.|+++....... +....-
T Consensus 107 ~v~dgl~flh~sAk---------------~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~ 171 (700)
T KOG2137|consen 107 NVADGLAFLHRSAK---------------VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQP 171 (700)
T ss_pred cccchhhhhccCcc---------------eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhcc
Confidence 67799999997542 9999999999999999999999999987554421 111112
Q ss_pred Cccccccccc-c-ccCCcceeeh--hHHHHHc-CCCCCCCCCCC--CCcccchhcc-cccccccccccHhHHHHHHHhhc
Q psy6542 189 SDCILHGYIK-K-LGGPFVSAWQ--TRYAKLF-PNRLELHPESG--QSKPELIFMD-QIEEVSQDLITVKGEQCVQLKLT 260 (334)
Q Consensus 189 t~~~~~~~v~-~-~~~~~~~~w~--~~~~~l~-~~~~~~~~~~~--~~~~~~i~~~-~~~~~~~~~~~~~~~~~i~~~~~ 260 (334)
...|.+||.. . ...+.+|..+ ++.+.++ ++..-+.+.+. .+..+....+ ..... ..-.+.....|+...+.
T Consensus 172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~-s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGY-SNNLPSELRESLKKLLN 250 (700)
T ss_pred CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccc-cccCcHHHHHHHHHHhc
Confidence 3445556552 2 2244555555 3222223 33322222211 1111111111 11111 12233356788888887
Q ss_pred cCchhhc
Q psy6542 261 RDTRIVL 267 (334)
Q Consensus 261 ~~p~~r~ 267 (334)
.+...|.
T Consensus 251 ~~~~~rp 257 (700)
T KOG2137|consen 251 GDSAVRP 257 (700)
T ss_pred CCcccCc
Confidence 7776666
No 482
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=95.39 E-value=0.031 Score=51.90 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=47.0
Q ss_pred EEEEEccCCChhHHhhhhhhhhhH-HHHHHHHHHHHHHHHHHHHh---h-cCCCCCchhhhhhcCCCCcEEeeCCCCCce
Q psy6542 85 YIIGVRQSGPKDQISRSKINRYHK-KLRKCFIRRTVQLLEPVHTC---H-SALNKNPLIAIFLTLSVPCLHFRDLKPANI 159 (334)
Q Consensus 85 ~ivmEy~~g~l~~l~~~~~~~~~~-~~~~~~~~i~~qi~~~L~yL---H-~~~~~~~~~~~~~~~~~~~iiHrDlKp~Ni 159 (334)
.||+.+..+.-|.+.......+.- ...+.+..++.|++.-.--+ - ..+ ++|-||||+||
T Consensus 247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~n----------------F~H~DLKPdNI 310 (434)
T PF05445_consen 247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTN----------------FLHVDLKPDNI 310 (434)
T ss_pred EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcce----------------eeecccCcCcE
Confidence 588888777744443333332211 23444556677886543222 1 223 89999999999
Q ss_pred eeCCCC------------------CEEEEecccccccC
Q psy6542 160 LLDEHG------------------HVRISDLGLACDFS 179 (334)
Q Consensus 160 Ll~~~~------------------~vkl~DFGla~~~~ 179 (334)
|+-++. .++|.||.+++..+
T Consensus 311 LiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~ 348 (434)
T PF05445_consen 311 LIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN 348 (434)
T ss_pred EEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence 994332 15677888877443
No 483
>KOG2268|consensus
Probab=95.26 E-value=0.021 Score=52.83 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=77.6
Q ss_pred EEEeceeCCCCCcEEEEEeeCCCc------------------chH--HhhhHHHHHHHHHhcCCCC--cccccccceeeE
Q psy6542 17 RVKPPSLKPLGFPIQIGMLRHRPH------------------ESR--VAKWRPYIQEIFNHLRNEP--FKKCVLLFKMNL 74 (334)
Q Consensus 17 ~V~~a~~~~~~~~vAIK~l~~~~~------------------~~~--~~~~~~~E~~il~~l~h~~--i~~~~~~~~v~~ 74 (334)
-||++-+.+ |++.++|+=+..+. ..- .+-...+|+..|+.|.... + .+-
T Consensus 107 DIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpV--------Pkp 177 (465)
T KOG2268|consen 107 DIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPV--------PKP 177 (465)
T ss_pred ceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCC--------CCc
Confidence 477777665 78888887554321 000 0113456888888886432 3 333
Q ss_pred EEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeC
Q psy6542 75 YKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRD 153 (334)
Q Consensus 75 ~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrD 153 (334)
+ +.++.++|||++.|- +-.+..-. .+..+.. .+..-+--|-.+| +||+|
T Consensus 178 i----D~~RH~Vvmelv~g~Pl~~v~~v~-------d~~~ly~---~lm~~Iv~la~~G----------------lIHgD 227 (465)
T KOG2268|consen 178 I----DHNRHCVVMELVDGYPLRQVRHVE-------DPPTLYD---DLMGLIVRLANHG----------------LIHGD 227 (465)
T ss_pred c----cccceeeHHHhhcccceeeeeecC-------ChHHHHH---HHHHHHHHHHHcC----------------ceecc
Confidence 3 456889999999987 32221111 1111111 2223334456678 99999
Q ss_pred CCCCceeeCCCCCEEEEecccccccCCC
Q psy6542 154 LKPANILLDEHGHVRISDLGLACDFSKK 181 (334)
Q Consensus 154 lKp~NiLl~~~~~vkl~DFGla~~~~~~ 181 (334)
.--=||++.+++.++++||==+......
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS~sh~ 255 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVSTSHP 255 (465)
T ss_pred cchheeEEecCCCEEEeechHhhccCCC
Confidence 9999999999999999999866544433
No 484
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=95.11 E-value=0.45 Score=41.22 Aligned_cols=118 Identities=15% Similarity=0.079 Sum_probs=73.9
Q ss_pred eEEEeceeCCCCCcEEEEEeeCCC---c----------ch------HHhhhHHHHHHHHHhcCCCCcccccccceeeEEE
Q psy6542 16 WRVKPPSLKPLGFPIQIGMLRHRP---H----------ES------RVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYK 76 (334)
Q Consensus 16 ~~V~~a~~~~~~~~vAIK~l~~~~---~----------~~------~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~ 76 (334)
..|+++.. .|+.+|+|+.+.-. . +. .....|..|.+.+.+|+..+- ..+ ..|+.|+
T Consensus 52 ~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~-e~~--~Avkc~G 126 (207)
T PF13095_consen 52 GYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR-EGL--WAVKCHG 126 (207)
T ss_pred eEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc-cCc--eEEEeeE
Confidence 45555543 46799999933210 0 10 223367789998888765432 000 1366666
Q ss_pred Eee-c----------------C-CeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q psy6542 77 VTS-E----------------P-NSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLI 138 (334)
Q Consensus 77 ~~~-~----------------~-~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~ 138 (334)
+.. + . -...||.||+.... . + .... +.+|++-+..+|..|
T Consensus 127 yl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----~-----~---~~~~----~~~~~~dl~~~~k~g------ 184 (207)
T PF13095_consen 127 YLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----P-----L---QIRD----IPQMLRDLKILHKLG------ 184 (207)
T ss_pred EEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----c-----c---chhH----HHHHHHHHHHHHHCC------
Confidence 653 1 0 12468889887774 0 0 1111 227888899999999
Q ss_pred hhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccc
Q psy6542 139 AIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLA 175 (334)
Q Consensus 139 ~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla 175 (334)
|+-+|+|+.|.. .=+|+|||.+
T Consensus 185 ----------I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 185 ----------IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ----------eeeccCcccccc-----CCEEEecccC
Confidence 999999999997 3479999965
No 485
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.09 E-value=0.23 Score=46.31 Aligned_cols=27 Identities=30% Similarity=0.234 Sum_probs=23.2
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.++|+|+-+.|||++ + .+.|+||+.|.
T Consensus 197 ~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 197 LRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred cceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 479999999999995 3 57899999875
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.58 E-value=0.43 Score=45.91 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=25.2
Q ss_pred CCcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 146 VPCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 146 ~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.|..+|+|+.|.||+++.++ .+++|.-+|-
T Consensus 229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~ 258 (418)
T PLN02756 229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAF 258 (418)
T ss_pred ccceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence 47799999999999999876 8888876653
No 487
>PTZ00296 choline kinase; Provisional
Probab=94.52 E-value=0.54 Score=45.86 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=25.2
Q ss_pred CCcEEeeCCCCCceeeCCCCCEEEEecccccc
Q psy6542 146 VPCLHFRDLKPANILLDEHGHVRISDLGLACD 177 (334)
Q Consensus 146 ~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~ 177 (334)
..++.|.|+-+.|||.+.++ +.++||-.|..
T Consensus 283 ~~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~ 313 (442)
T PTZ00296 283 DIVFCHNDLQENNIINTNKC-LRLIDFEYSGY 313 (442)
T ss_pred CeeEEeCCCCccceeecCCC-EEEEeeccccc
Confidence 34567999999999876544 99999998863
No 488
>KOG2270|consensus
Probab=94.48 E-value=0.52 Score=44.58 Aligned_cols=136 Identities=14% Similarity=0.170 Sum_probs=78.4
Q ss_pred CceEEEeceeCCCCCcEEEEEeeCCCc------------------------chHHhhhHHHHHHHHHhcCCCCccccccc
Q psy6542 14 SKWRVKPPSLKPLGFPIQIGMLRHRPH------------------------ESRVAKWRPYIQEIFNHLRNEPFKKCVLL 69 (334)
Q Consensus 14 ~~~~V~~a~~~~~~~~vAIK~l~~~~~------------------------~~~~~~~~~~E~~il~~l~h~~i~~~~~~ 69 (334)
.--.||.|.... |..+|||+.+..-. ..-++-+...|++-|++|+...| -|--+
T Consensus 156 KEANVYHat~~d-G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI-P~PeP 233 (520)
T KOG2270|consen 156 KEANVYHATEED-GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI-PCPEP 233 (520)
T ss_pred ccceeEeeecCC-CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC-CCCCc
Confidence 345799987665 78899999864210 11223355668888888877665 11111
Q ss_pred ceeeEEEEeecCCeEEEEEEccCCC-hhHHhhhhhhhhhHH-HHHHHHHHHHHHHHHHHHh-hcCCCCCchhhhhhcCCC
Q psy6542 70 FKMNLYKVTSEPNSHYIIGVRQSGP-KDQISRSKINRYHKK-LRKCFIRRTVQLLEPVHTC-HSALNKNPLIAIFLTLSV 146 (334)
Q Consensus 70 ~~v~~~~~~~~~~~~~ivmEy~~g~-l~~l~~~~~~~~~~~-~~~~~~~i~~qi~~~L~yL-H~~~~~~~~~~~~~~~~~ 146 (334)
..+ ....+||+|+..+ ...-.... ..++.. ....+. |++.-+.-| |..+
T Consensus 234 IlL---------k~hVLVM~FlGrdgw~aPkLKd-~~ls~~ka~~~Y~----~~v~~MR~lY~~c~-------------- 285 (520)
T KOG2270|consen 234 ILL---------KNHVLVMEFLGRDGWAAPKLKD-ASLSTSKARELYQ----QCVRIMRRLYQKCR-------------- 285 (520)
T ss_pred eee---------ecceEeeeeccCCCCcCccccc-ccCChHHHHHHHH----HHHHHHHHHHHHhc--------------
Confidence 001 2347899999865 11100111 122211 222232 344434433 3445
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEecccccccCCCC
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKK 182 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~ 182 (334)
+||.||.-=|+|+.+ |.+.++|-+=+.....+.
T Consensus 286 --LVHADLSEfN~Lyhd-G~lyiIDVSQSVE~DHP~ 318 (520)
T KOG2270|consen 286 --LVHADLSEFNLLYHD-GKLYIIDVSQSVEHDHPH 318 (520)
T ss_pred --eeccchhhhhheEEC-CEEEEEEccccccCCChh
Confidence 999999999999865 789999998776554443
No 489
>PRK06148 hypothetical protein; Provisional
Probab=94.44 E-value=1.2 Score=48.13 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=25.1
Q ss_pred cEEeeCCCCCceeeCCCC--CE-EEEeccccc
Q psy6542 148 CLHFRDLKPANILLDEHG--HV-RISDLGLAC 176 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~--~v-kl~DFGla~ 176 (334)
.+||.|+.+.|||++.++ .+ -|+|||.+.
T Consensus 204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 204 QVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred ceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 489999999999999875 45 599999886
No 490
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.12 E-value=0.8 Score=40.55 Aligned_cols=72 Identities=10% Similarity=-0.036 Sum_probs=47.4
Q ss_pred CCceEEEeceeCCCC-CcEEEEEeeCCCcchHHhhhHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEcc
Q psy6542 13 VSKWRVKPPSLKPLG-FPIQIGMLRHRPHESRVAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQ 91 (334)
Q Consensus 13 ~~~~~V~~a~~~~~~-~~vAIK~l~~~~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~ 91 (334)
++-+-|.-|+...+| .++-+|.-. ......|..|+.-|..|.-.|- ..+.+.+.+..+.+..|+||||+
T Consensus 24 v~gG~inea~~v~dg~~~~FvK~n~-----~~~~~~f~AEa~gL~~la~s~t-----i~VP~vi~~G~~~~~sylVle~L 93 (286)
T COG3001 24 VSGGDINEAWRLRDGTDPFFVKCNQ-----REQLSMFTAEADGLELLARSNT-----ITVPKVIAVGASRDHSYLVLEYL 93 (286)
T ss_pred cCCccccceeEeecCCcceEEEecc-----hhhHHHHHHHHHHHHHHHhcCC-----ccccceEEecCCCCeeEEEEeec
Confidence 344556666655444 457777544 2234566778887777765552 01278888888999999999998
Q ss_pred CCC
Q psy6542 92 SGP 94 (334)
Q Consensus 92 ~g~ 94 (334)
+-+
T Consensus 94 ~~~ 96 (286)
T COG3001 94 PTG 96 (286)
T ss_pred cCC
Confidence 775
No 491
>PRK05231 homoserine kinase; Provisional
Probab=93.99 E-value=0.034 Score=51.46 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=25.4
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.++|+|+.|.||+++.+....|+||+.|.
T Consensus 188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 188 GVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred ccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 49999999999999876556899999875
No 492
>PTZ00384 choline kinase; Provisional
Probab=93.98 E-value=0.42 Score=45.69 Aligned_cols=30 Identities=23% Similarity=0.078 Sum_probs=24.6
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEecccccc
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLACD 177 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~ 177 (334)
..+.|.|+-+.|||.++ +.+.++||-.|..
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEeccccC
Confidence 34679999999999765 4599999998863
No 493
>PRK10271 thiK thiamine kinase; Provisional
Probab=93.97 E-value=0.046 Score=46.69 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=25.5
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEecccccc
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLACD 177 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~~ 177 (334)
..+|+|+.|.|++++++| ++|+||+.|..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 478999999999998877 99999998853
No 494
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=93.83 E-value=0.055 Score=49.32 Aligned_cols=35 Identities=29% Similarity=0.262 Sum_probs=28.9
Q ss_pred CCCCcEEeeCCCCCceeeCCCCC-EEEEeccccccc
Q psy6542 144 LSVPCLHFRDLKPANILLDEHGH-VRISDLGLACDF 178 (334)
Q Consensus 144 ~~~~~iiHrDlKp~NiLl~~~~~-vkl~DFGla~~~ 178 (334)
...|.++|+|+.|.||++++++. ..|+||+.+..-
T Consensus 182 ~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 182 PRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 55678999999999999997565 579999988643
No 495
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=93.70 E-value=0.071 Score=49.18 Aligned_cols=29 Identities=31% Similarity=0.488 Sum_probs=26.1
Q ss_pred cEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 148 CLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 148 ~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
.++|+|+.+.|++++.++.+.|+||+.+.
T Consensus 188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 188 GVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred ccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 49999999999999988877899999874
No 496
>KOG1826|consensus
Probab=93.62 E-value=0.013 Score=63.81 Aligned_cols=146 Identities=11% Similarity=-0.089 Sum_probs=92.7
Q ss_pred HhhhHHHHHHHHHhcCCCCcccccccceeeEEEEee--cCCeEEEEEEccCCC--hhHHhhhhhhhhhHHHHHHHHHHHH
Q psy6542 44 VAKWRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTS--EPNSHYIIGVRQSGP--KDQISRSKINRYHKKLRKCFIRRTV 119 (334)
Q Consensus 44 ~~~~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~--~~~~~~ivmEy~~g~--l~~l~~~~~~~~~~~~~~~~~~i~~ 119 (334)
.++....|..-.+...|+++ ...+.-.. +....|+.|+|+.+| .+.+ .....+.+......+.....
T Consensus 1272 lkemll~e~de~~~~~h~~~--------~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iI-ikg~ee~~~ld~~~v~~~~k 1342 (2724)
T KOG1826|consen 1272 LKEMLLSERDELREAKHYLT--------EVDPLRIPPSESTEEYIRSLYVEFGKLFSII-IKGLEESPDLDRSPVHLRHK 1342 (2724)
T ss_pred HHHhhhhhhhhhhhhhceee--------ecccccCCCCCChHHHHHHHHHHHhHHHHHH-HhccccCCcchhchHHHHHH
Confidence 44445556666777899998 66665544 345679999999999 3444 33344444444443332223
Q ss_pred HHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEecccccccCCCCC--CccccCcccccccc
Q psy6542 120 QLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVESDCILHGYI 197 (334)
Q Consensus 120 qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGla~~~~~~~~--~~~~~t~~~~~~~v 197 (334)
+.+.+..-+|...+.|. ..+|++||+-|.+|..+-.||+.++|+.+....... ....++++|+.+.+
T Consensus 1343 vsvl~~~~~ls~tnlg~-----------T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli 1411 (2724)
T KOG1826|consen 1343 VSVLNRNVILSLTNLGN-----------TNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLI 1411 (2724)
T ss_pred HHHhccchhhhcccCCc-----------cchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHH
Confidence 44777888777654443 278999999999999999999999999984443332 22334555666665
Q ss_pred c-cccCCc-ceeeh
Q psy6542 198 K-KLGGPF-VSAWQ 209 (334)
Q Consensus 198 ~-~~~~~~-~~~w~ 209 (334)
. ...++. +|.|.
T Consensus 1412 ~N~ik~t~rsdilr 1425 (2724)
T KOG1826|consen 1412 KNEIKFTKRSDILR 1425 (2724)
T ss_pred HHHHhhhhHHHHHH
Confidence 3 233555 44444
No 497
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=93.38 E-value=0.22 Score=45.76 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=25.3
Q ss_pred CcEEeeCCCCCceeeCCCCCEEEEeccccc
Q psy6542 147 PCLHFRDLKPANILLDEHGHVRISDLGLAC 176 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~~vkl~DFGla~ 176 (334)
+.++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 34899999999999988 678999999764
No 498
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=92.19 E-value=0.13 Score=44.18 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=25.5
Q ss_pred CcEEeeCCCCCceeeCCCC-----CEEEEeccccc
Q psy6542 147 PCLHFRDLKPANILLDEHG-----HVRISDLGLAC 176 (334)
Q Consensus 147 ~~iiHrDlKp~NiLl~~~~-----~vkl~DFGla~ 176 (334)
+.++|+|+.+.||++..++ .+.++||..++
T Consensus 120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 4589999999999998653 58999999875
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=92.10 E-value=0.77 Score=40.48 Aligned_cols=86 Identities=16% Similarity=0.103 Sum_probs=57.7
Q ss_pred hHHHHHHHHHhcCCCCcccccccceeeEEEEeecCCeEEEEEEccCCChhHHhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy6542 47 WRPYIQEIFNHLRNEPFKKCVLLFKMNLYKVTSEPNSHYIIGVRQSGPKDQISRSKINRYHKKLRKCFIRRTVQLLEPVH 126 (334)
Q Consensus 47 ~~~~E~~il~~l~h~~i~~~~~~~~v~~~~~~~~~~~~~ivmEy~~g~l~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~ 126 (334)
.+..+.+++.++.. | +++..- .+..+-++.|+|-.-... . ..++..-+.+|.
T Consensus 104 ~y~nky~v~ArmhG--i--------lrL~ND--n~~~yGvIlE~Cy~~~i~------------~----~N~i~agi~~L~ 155 (308)
T PF07387_consen 104 LYFNKYRVFARMHG--I--------LRLKND--NNYKYGVILERCYKIKIN------------F----SNFITAGIKDLM 155 (308)
T ss_pred hhhhhhhHHHHhhh--e--------eEeecC--CCceeEEEEeeccCcccc------------h----hHHHHHhHHHHH
Confidence 34667888877653 4 666522 444578999988665210 0 111112256777
Q ss_pred HhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceeeCCCCCEEEEeccc
Q psy6542 127 TCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILLDEHGHVRISDLGL 174 (334)
Q Consensus 127 yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl~~~~~vkl~DFGl 174 (334)
-.|+.. +..+|+|.-|+||+-|+.|.+||.|=+.
T Consensus 156 ~fH~~~--------------~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 156 DFHSEN--------------QHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred HhhccC--------------CCeecCCCChhheeecCCCCEEecChhh
Confidence 888543 2299999999999999999999999774
No 500
>PHA03111 Ser/Thr kinase; Provisional
Probab=91.80 E-value=0.55 Score=43.73 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=38.4
Q ss_pred EEEEEEccCCChhHHhhhhhh--hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhhhcCCCCcEEeeCCCCCceee
Q psy6542 84 HYIIGVRQSGPKDQISRSKIN--RYHKKLRKCFIRRTVQLLEPVHTCHSALNKNPLIAIFLTLSVPCLHFRDLKPANILL 161 (334)
Q Consensus 84 ~~ivmEy~~g~l~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~~~~~~~~~~~~~~iiHrDlKp~NiLl 161 (334)
-.||+.+..+.-+.+...... ++.. ..+.+..++.|++.-.-++-+.. +--.++|-||||+|||+
T Consensus 250 nIIIfPLArcSadkv~~~~~~e~GF~s-~~~YikfifLQiaLLyikIYelp------------~c~nF~H~DLKPdNILi 316 (444)
T PHA03111 250 NIIIFPLARCSADKVTEENAAELGFKS-LVEYIKFIFLQIALLYIKIYELP------------CCDNFLHVDLKPDNILI 316 (444)
T ss_pred cEEEEehhhcccccCCHHHHHHcCCcc-HHHHHHHHHHHHHHHHHhhhcCC------------CcceeeeccCCCCcEEE
Confidence 468888877664333332222 2222 34445566778876553442211 00118999999999999
Q ss_pred CCC
Q psy6542 162 DEH 164 (334)
Q Consensus 162 ~~~ 164 (334)
-++
T Consensus 317 Fds 319 (444)
T PHA03111 317 FDS 319 (444)
T ss_pred ecC
Confidence 443
Done!