BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy6545
         (59 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q2VPU4|MLXIP_MOUSE MLX-interacting protein OS=Mus musculus GN=Mlxip PE=1 SV=1
          Length = 917

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQSIK 41
           KL SPKW  FKG++L+W+DKIRLNN IWR WYMQ ++
Sbjct: 140 KLVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLE 176


>sp|Q9HAP2|MLXIP_HUMAN MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2
          Length = 919

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQSIK 41
           KL SPKW  FKG++L+W+DKIRLNN IWR WYMQ ++
Sbjct: 140 KLVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLE 176


>sp|Q9NP71|MLXPL_HUMAN Carbohydrate-responsive element-binding protein OS=Homo sapiens
           GN=MLXIPL PE=1 SV=1
          Length = 852

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/37 (64%), Positives = 29/37 (78%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQSIK 41
           KL SPKW  FKG++L  +DKIRLNN IWR WY+Q +K
Sbjct: 100 KLVSPKWKNFKGLKLLCRDKIRLNNAIWRAWYIQYVK 136


>sp|Q8VIP2|MLXPL_RAT Carbohydrate-responsive element-binding protein OS=Rattus
           norvegicus GN=Mlxipl PE=1 SV=1
          Length = 865

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 29/37 (78%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQSIK 41
           KL SPKW  FKG++L  +DKIRLNN IWR WY+Q ++
Sbjct: 100 KLVSPKWKNFKGLKLLCRDKIRLNNAIWRAWYIQYVQ 136


>sp|Q99MZ3|MLXPL_MOUSE Carbohydrate-responsive element-binding protein OS=Mus musculus
           GN=Mlxipl PE=1 SV=1
          Length = 864

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 29/37 (78%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQSIK 41
           KL SPKW  FKG++L  +DKIRLNN IWR WY+Q ++
Sbjct: 100 KLVSPKWKNFKGLKLLCRDKIRLNNAIWRAWYIQYVQ 136


>sp|P41846|WBS14_CAEEL Protein WBSCR14 homolog OS=Caenorhabditis elegans GN=mml-1 PE=2
           SV=2
          Length = 1009

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 29/34 (85%)

Query: 5   KLTSPKWNRFKGIRLRWKDKIRLNNVIWRCWYMQ 38
           K+T+PKW  FKG+RL WK ++RLNNVIWR +Y++
Sbjct: 92  KMTTPKWKDFKGLRLHWKQRVRLNNVIWRAYYIE 125


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.134    0.463 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,097,983
Number of Sequences: 539616
Number of extensions: 559528
Number of successful extensions: 1047
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1041
Number of HSP's gapped (non-prelim): 6
length of query: 59
length of database: 191,569,459
effective HSP length: 32
effective length of query: 27
effective length of database: 174,301,747
effective search space: 4706147169
effective search space used: 4706147169
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)