Query psy6547
Match_columns 266
No_of_seqs 124 out of 1339
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 20:47:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 100.0 4.2E-39 1.4E-43 284.4 25.8 254 3-261 171-455 (456)
2 4e3q_A Pyruvate transaminase; 100.0 4.6E-39 1.6E-43 285.1 25.8 256 2-264 179-471 (473)
3 3i5t_A Aminotransferase; pyrid 100.0 3.8E-38 1.3E-42 281.3 26.8 257 2-264 165-457 (476)
4 1z7d_A Ornithine aminotransfer 100.0 7.2E-38 2.5E-42 276.5 27.8 247 9-262 182-430 (433)
5 2oat_A Ornithine aminotransfer 100.0 8.1E-38 2.8E-42 276.6 28.0 246 9-260 193-438 (439)
6 3hmu_A Aminotransferase, class 100.0 7.5E-38 2.6E-42 279.0 22.9 253 3-262 168-453 (472)
7 3tfu_A Adenosylmethionine-8-am 100.0 1.3E-37 4.5E-42 276.5 23.8 249 6-262 191-454 (457)
8 3dod_A Adenosylmethionine-8-am 100.0 4.5E-37 1.5E-41 272.5 26.5 257 2-264 155-446 (448)
9 3gju_A Putative aminotransfera 100.0 5.1E-37 1.7E-41 273.0 25.7 257 3-263 164-458 (460)
10 3nx3_A Acoat, acetylornithine 100.0 3.8E-37 1.3E-41 268.5 24.4 248 4-260 145-394 (395)
11 4ffc_A 4-aminobutyrate aminotr 100.0 6.4E-37 2.2E-41 271.9 25.8 255 4-264 172-452 (453)
12 3oks_A 4-aminobutyrate transam 100.0 1.4E-36 4.8E-41 269.6 25.8 252 4-260 169-450 (451)
13 4a6r_A Omega transaminase; tra 100.0 5.4E-37 1.9E-41 272.8 20.9 255 3-263 163-451 (459)
14 2pb2_A Acetylornithine/succiny 100.0 1.3E-36 4.3E-41 267.5 22.8 245 10-262 173-419 (420)
15 3n5m_A Adenosylmethionine-8-am 100.0 8.5E-36 2.9E-40 264.5 27.5 253 3-260 159-451 (452)
16 4ao9_A Beta-phenylalanine amin 100.0 9.1E-36 3.1E-40 262.2 23.7 237 17-263 196-448 (454)
17 3dxv_A Alpha-amino-epsilon-cap 100.0 1.2E-35 4.3E-40 262.4 23.8 247 9-261 158-425 (439)
18 3ruy_A Ornithine aminotransfer 100.0 7.7E-35 2.7E-39 253.6 27.7 245 3-258 147-391 (392)
19 3i4j_A Aminotransferase, class 100.0 2E-35 7E-40 260.4 23.3 255 4-262 142-429 (430)
20 4adb_A Succinylornithine trans 100.0 1.1E-34 3.8E-39 253.5 24.4 251 5-263 150-402 (406)
21 3l44_A Glutamate-1-semialdehyd 100.0 1.1E-34 3.7E-39 256.1 24.2 240 18-264 179-433 (434)
22 2cjg_A L-lysine-epsilon aminot 100.0 1.8E-34 6.1E-39 255.9 23.6 241 9-261 184-448 (449)
23 1zod_A DGD, 2,2-dialkylglycine 100.0 6.1E-34 2.1E-38 251.1 23.1 245 11-261 155-432 (433)
24 3a8u_X Omega-amino acid--pyruv 100.0 5.4E-34 1.8E-38 252.7 22.7 245 11-261 170-447 (449)
25 2eo5_A 419AA long hypothetical 100.0 1.6E-33 5.6E-38 247.6 25.3 236 11-261 158-418 (419)
26 1sff_A 4-aminobutyrate aminotr 100.0 5.6E-33 1.9E-37 244.2 27.8 244 12-261 158-424 (426)
27 4e77_A Glutamate-1-semialdehyd 100.0 1.6E-33 5.5E-38 248.3 24.2 238 16-260 175-428 (429)
28 1s0a_A Adenosylmethionine-8-am 100.0 3.8E-33 1.3E-37 245.8 25.5 242 12-261 164-424 (429)
29 2ord_A Acoat, acetylornithine 100.0 2.6E-33 8.9E-38 244.4 24.1 238 12-260 157-396 (397)
30 3k28_A Glutamate-1-semialdehyd 100.0 1.6E-33 5.4E-38 248.4 19.9 235 18-261 177-427 (429)
31 3fq8_A Glutamate-1-semialdehyd 100.0 1E-32 3.5E-37 243.0 24.9 235 19-260 177-426 (427)
32 2epj_A Glutamate-1-semialdehyd 100.0 1.3E-32 4.3E-37 242.9 23.6 237 19-262 181-432 (434)
33 1vef_A Acetylornithine/acetyl- 100.0 4.2E-32 1.4E-36 236.5 24.6 234 13-258 160-394 (395)
34 4a0g_A Adenosylmethionine-8-am 100.0 5.8E-34 2E-38 267.5 12.5 228 29-261 577-828 (831)
35 2e7u_A Glutamate-1-semialdehyd 100.0 7.4E-32 2.5E-36 237.3 22.1 232 18-257 176-423 (424)
36 2eh6_A Acoat, acetylornithine 100.0 3.5E-31 1.2E-35 229.0 25.0 229 12-257 146-374 (375)
37 1ohv_A 4-aminobutyrate aminotr 100.0 1E-31 3.5E-36 239.5 21.9 220 27-260 241-470 (472)
38 2cy8_A D-phgat, D-phenylglycin 100.0 1.1E-31 3.8E-36 238.1 20.8 234 18-262 178-436 (453)
39 2yky_A Beta-transaminase; tran 100.0 4.1E-34 1.4E-38 253.1 0.0 234 19-262 211-461 (465)
40 3aow_A Putative uncharacterize 100.0 1.6E-27 5.3E-32 211.2 16.0 247 7-262 175-446 (448)
41 3op7_A Aminotransferase class 99.9 2.9E-27 9.9E-32 204.4 15.8 236 13-262 122-372 (375)
42 2zc0_A Alanine glyoxylate tran 99.9 2.3E-26 7.9E-31 200.9 17.9 240 14-263 140-406 (407)
43 3l8a_A METC, putative aminotra 99.9 3.1E-27 1.1E-31 207.6 11.9 234 14-259 161-420 (421)
44 2w8t_A SPT, serine palmitoyltr 99.9 4.6E-26 1.6E-30 200.6 19.4 233 15-264 167-418 (427)
45 1yiz_A Kynurenine aminotransfe 99.9 1.2E-26 4E-31 204.3 13.6 221 26-259 170-427 (429)
46 1vp4_A Aminotransferase, putat 99.9 6.9E-27 2.4E-31 205.6 11.5 245 13-265 150-422 (425)
47 3tqx_A 2-amino-3-ketobutyrate 99.9 2.6E-26 9.1E-31 199.7 13.9 234 11-261 142-396 (399)
48 2r2n_A Kynurenine/alpha-aminoa 99.9 6.2E-26 2.1E-30 199.6 16.1 242 11-261 147-424 (425)
49 3kki_A CAI-1 autoinducer synth 99.9 5.8E-26 2E-30 198.7 15.3 228 13-260 160-403 (409)
50 1gd9_A Aspartate aminotransfer 99.9 4.2E-26 1.4E-30 198.1 14.3 232 16-261 131-386 (389)
51 3g0t_A Putative aminotransfera 99.9 7.9E-26 2.7E-30 199.2 14.8 236 14-260 151-436 (437)
52 2dou_A Probable N-succinyldiam 99.9 6.9E-27 2.4E-31 202.2 7.7 228 15-258 130-375 (376)
53 2zyj_A Alpha-aminodipate amino 99.9 2.3E-26 8E-31 200.4 11.0 240 13-262 132-394 (397)
54 3b46_A Aminotransferase BNA3; 99.9 3.8E-26 1.3E-30 202.2 12.5 218 26-256 189-442 (447)
55 3ly1_A Putative histidinol-pho 99.9 1.4E-25 4.9E-30 192.3 15.5 230 11-260 107-351 (354)
56 1j32_A Aspartate aminotransfer 99.9 6.5E-26 2.2E-30 196.8 12.9 234 15-261 133-387 (388)
57 1u08_A Hypothetical aminotrans 99.9 7.8E-26 2.7E-30 196.3 12.8 231 13-256 132-385 (386)
58 2dr1_A PH1308 protein, 386AA l 99.9 3.3E-24 1.1E-28 185.6 22.6 231 16-262 117-380 (386)
59 2x5f_A Aspartate_tyrosine_phen 99.9 3.5E-25 1.2E-29 194.9 16.5 242 11-261 152-429 (430)
60 3piu_A 1-aminocyclopropane-1-c 99.9 1.2E-24 4E-29 191.9 19.7 241 10-262 149-433 (435)
61 3ez1_A Aminotransferase MOCR f 99.9 1.4E-25 4.6E-30 197.1 13.5 241 14-263 142-417 (423)
62 2x5d_A Probable aminotransfera 99.9 5.7E-26 2E-30 198.9 10.9 232 16-262 143-399 (412)
63 3euc_A Histidinol-phosphate am 99.9 4.9E-25 1.7E-29 189.9 16.4 234 6-259 119-366 (367)
64 2o1b_A Aminotransferase, class 99.9 2E-26 6.9E-31 201.4 7.8 232 14-260 151-402 (404)
65 1o4s_A Aspartate aminotransfer 99.9 7.9E-26 2.7E-30 196.6 11.0 228 14-259 143-387 (389)
66 3dzz_A Putative pyridoxal 5'-p 99.9 2.7E-25 9.3E-30 192.8 14.3 238 13-261 126-389 (391)
67 1fc4_A 2-amino-3-ketobutyrate 99.9 8.8E-25 3E-29 190.5 17.6 232 13-261 146-397 (401)
68 3h14_A Aminotransferase, class 99.9 1.4E-25 4.7E-30 195.0 12.3 237 12-264 131-385 (391)
69 1b5p_A Protein (aspartate amin 99.9 2.1E-25 7.3E-30 193.6 13.4 233 13-259 132-383 (385)
70 3ffh_A Histidinol-phosphate am 99.9 4.2E-25 1.4E-29 190.1 15.0 223 13-257 125-362 (363)
71 3dyd_A Tyrosine aminotransfera 99.9 3.2E-25 1.1E-29 195.2 14.4 239 11-262 157-425 (427)
72 1iay_A ACC synthase 2, 1-amino 99.9 1.5E-24 5.1E-29 190.8 18.4 233 15-260 152-426 (428)
73 3ppl_A Aspartate aminotransfer 99.9 2.2E-25 7.7E-30 196.0 12.9 244 11-264 148-423 (427)
74 3fdb_A Beta C-S lyase, putativ 99.9 3.4E-26 1.2E-30 197.7 7.5 235 13-260 122-375 (377)
75 2o0r_A RV0858C (N-succinyldiam 99.9 1E-25 3.5E-30 197.2 10.3 235 14-261 128-396 (411)
76 3nra_A Aspartate aminotransfer 99.9 4E-26 1.4E-30 199.2 7.5 236 13-261 143-405 (407)
77 2z61_A Probable aspartate amin 99.9 9.8E-26 3.4E-30 194.6 9.8 225 13-259 130-369 (370)
78 3fvs_A Kynurenine--oxoglutarat 99.9 7E-25 2.4E-29 192.4 14.8 221 27-260 163-421 (422)
79 3jtx_A Aminotransferase; NP_28 99.9 1.2E-25 4E-30 195.6 9.8 229 13-258 137-395 (396)
80 1v2d_A Glutamine aminotransfer 99.9 3.2E-25 1.1E-29 192.1 12.3 228 14-261 120-371 (381)
81 3ezs_A Aminotransferase ASPB; 99.9 1.1E-25 3.9E-30 194.4 9.4 226 13-260 125-374 (376)
82 3d6k_A Putative aminotransfera 99.9 2.5E-25 8.7E-30 195.5 11.7 240 14-263 149-420 (422)
83 1c7n_A Cystalysin; transferase 99.9 1.2E-24 4E-29 189.6 15.7 238 14-263 131-395 (399)
84 3ele_A Amino transferase; RER0 99.9 5.4E-25 1.9E-29 191.6 13.5 232 11-261 139-396 (398)
85 3if2_A Aminotransferase; YP_26 99.9 9.2E-25 3.2E-29 192.9 14.9 243 13-264 168-443 (444)
86 1d2f_A MALY protein; aminotran 99.9 1.9E-24 6.5E-29 187.8 16.6 235 15-261 130-389 (390)
87 4dq6_A Putative pyridoxal phos 99.9 6.1E-25 2.1E-29 190.6 13.2 233 13-258 131-390 (391)
88 1xi9_A Putative transaminase; 99.9 1.9E-25 6.7E-30 195.1 9.9 235 15-262 144-404 (406)
89 3a2b_A Serine palmitoyltransfe 99.9 6.6E-24 2.3E-28 184.8 18.8 230 14-261 145-392 (398)
90 3kax_A Aminotransferase, class 99.9 7.7E-25 2.6E-29 189.5 12.1 234 13-258 123-382 (383)
91 2gb3_A Aspartate aminotransfer 99.9 4.2E-25 1.4E-29 193.3 10.5 232 16-263 146-404 (409)
92 3qgu_A LL-diaminopimelate amin 99.9 2.4E-25 8.2E-30 197.0 8.9 229 20-262 189-441 (449)
93 1fg7_A Histidinol phosphate am 99.9 1.8E-24 6.1E-29 186.0 13.9 219 16-256 120-353 (356)
94 3e2y_A Kynurenine-oxoglutarate 99.9 1.8E-24 6E-29 189.0 13.0 230 14-256 127-408 (410)
95 3kgw_A Alanine-glyoxylate amin 99.9 1.2E-23 4.1E-28 182.4 18.0 234 16-264 120-391 (393)
96 1bs0_A Protein (8-amino-7-oxon 99.9 4.1E-24 1.4E-28 185.2 15.1 227 13-257 140-383 (384)
97 2bwn_A 5-aminolevulinate synth 99.9 1.1E-23 3.6E-28 183.7 17.6 229 14-260 150-399 (401)
98 1m32_A 2-aminoethylphosphonate 99.9 7.4E-23 2.5E-27 175.6 21.8 230 17-260 103-364 (366)
99 3g7q_A Valine-pyruvate aminotr 99.9 2.9E-24 9.8E-29 188.1 13.1 236 15-263 153-415 (417)
100 3get_A Histidinol-phosphate am 99.9 1.4E-24 4.9E-29 186.9 10.5 225 13-258 123-364 (365)
101 3cq5_A Histidinol-phosphate am 99.9 1.4E-23 5E-28 181.0 16.8 223 14-259 134-366 (369)
102 3nnk_A Ureidoglycine-glyoxylat 99.9 1.9E-23 6.6E-28 182.3 17.7 233 15-262 109-391 (411)
103 3rq1_A Aminotransferase class 99.9 3.9E-24 1.3E-28 187.5 13.2 235 11-261 141-415 (418)
104 3ftb_A Histidinol-phosphate am 99.9 1.3E-23 4.3E-28 180.5 15.8 228 12-259 114-359 (361)
105 1lc5_A COBD, L-threonine-O-3-p 99.9 4.1E-24 1.4E-28 184.1 12.0 227 15-261 117-360 (364)
106 3zrp_A Serine-pyruvate aminotr 99.9 1.8E-22 6.1E-27 174.4 21.6 233 14-262 97-364 (384)
107 1elu_A L-cysteine/L-cystine C- 99.9 8.7E-23 3E-27 176.8 19.6 221 17-256 126-387 (390)
108 3ei9_A LL-diaminopimelate amin 99.9 5.4E-24 1.9E-28 187.4 11.5 226 18-258 176-425 (432)
109 3asa_A LL-diaminopimelate amin 99.9 1E-24 3.5E-29 190.3 6.6 234 16-263 138-395 (400)
110 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 7.7E-24 2.6E-28 182.4 11.5 229 14-261 111-370 (371)
111 3f9t_A TDC, L-tyrosine decarbo 99.9 3.6E-23 1.2E-27 179.3 15.5 226 15-259 142-396 (397)
112 2z9v_A Aspartate aminotransfer 99.9 2E-22 6.9E-27 174.9 20.2 230 17-262 106-372 (392)
113 1bw0_A TAT, protein (tyrosine 99.9 4.1E-23 1.4E-27 180.8 15.3 236 15-262 147-414 (416)
114 2yrr_A Aminotransferase, class 99.9 1.2E-22 4.2E-27 173.4 17.4 227 16-260 96-352 (353)
115 3isl_A Purine catabolism prote 99.9 1.7E-22 5.9E-27 176.5 18.1 232 15-261 107-390 (416)
116 3hdo_A Histidinol-phosphate am 99.9 1.2E-23 4.3E-28 180.8 9.7 226 14-261 124-355 (360)
117 3ke3_A Putative serine-pyruvat 99.9 1.2E-22 4.1E-27 176.1 15.8 223 25-262 121-377 (379)
118 1ajs_A Aspartate aminotransfer 99.9 2.4E-23 8.3E-28 182.0 10.2 230 14-261 148-411 (412)
119 3b1d_A Betac-S lyase; HET: PLP 99.8 6.2E-25 2.1E-29 191.1 0.0 242 6-259 123-391 (392)
120 1kmj_A Selenocysteine lyase; p 99.9 1.7E-21 5.6E-26 169.6 21.6 224 17-261 138-405 (406)
121 1qz9_A Kynureninase; kynurenin 99.9 6.9E-22 2.4E-26 172.9 19.0 224 17-262 146-403 (416)
122 3t18_A Aminotransferase class 99.9 5E-23 1.7E-27 180.2 11.8 231 13-262 142-411 (413)
123 3f0h_A Aminotransferase; RER07 99.9 7.2E-22 2.5E-26 170.4 18.8 225 17-260 118-373 (376)
124 1vjo_A Alanine--glyoxylate ami 99.9 2.9E-22 9.8E-27 174.0 16.3 224 16-258 131-392 (393)
125 3f6t_A Aspartate aminotransfer 99.9 4.7E-22 1.6E-26 179.6 17.0 240 11-263 208-527 (533)
126 3cai_A Possible aminotransfera 99.9 2E-21 7E-26 169.4 19.0 220 17-256 138-404 (406)
127 1t3i_A Probable cysteine desul 99.9 5.4E-21 1.8E-25 167.1 21.3 225 16-261 142-413 (420)
128 2huf_A Alanine glyoxylate amin 99.9 1.5E-21 5.2E-26 169.4 17.5 230 16-262 116-384 (393)
129 1eg5_A Aminotransferase; PLP-d 99.9 5.4E-21 1.9E-25 165.1 20.8 226 16-262 112-377 (384)
130 3tcm_A Alanine aminotransferas 99.9 2.2E-22 7.6E-27 180.5 11.9 248 6-264 192-497 (500)
131 1iug_A Putative aspartate amin 99.9 1.4E-21 4.7E-26 167.0 16.3 226 16-262 97-349 (352)
132 3e9k_A Kynureninase; kynurenin 99.9 1.6E-21 5.5E-26 173.3 16.9 221 27-261 200-461 (465)
133 2q7w_A Aspartate aminotransfer 99.9 3.9E-23 1.3E-27 179.7 6.1 228 13-257 137-395 (396)
134 3mad_A Sphingosine-1-phosphate 99.9 1.2E-21 4E-26 176.4 15.9 240 7-263 203-471 (514)
135 3lvm_A Cysteine desulfurase; s 99.9 9.1E-21 3.1E-25 166.1 21.0 224 17-262 137-400 (423)
136 4hvk_A Probable cysteine desul 99.9 1.1E-20 3.9E-25 162.7 20.7 227 16-263 111-375 (382)
137 3p1t_A Putative histidinol-pho 99.9 1.8E-21 6.1E-26 165.5 14.9 224 6-258 100-334 (337)
138 2ch1_A 3-hydroxykynurenine tra 99.9 4.2E-21 1.4E-25 166.7 17.6 230 16-262 115-384 (396)
139 3ihj_A Alanine aminotransferas 99.9 5.6E-22 1.9E-26 177.7 12.1 247 6-263 191-495 (498)
140 1yaa_A Aspartate aminotransfer 99.9 1.9E-22 6.6E-27 176.4 8.8 238 6-260 134-410 (412)
141 2ay1_A Aroat, aromatic amino a 99.9 1.1E-22 3.6E-27 176.9 6.9 227 14-257 135-392 (394)
142 3fkd_A L-threonine-O-3-phospha 99.9 6.6E-22 2.3E-26 169.3 11.6 227 12-263 105-344 (350)
143 4f4e_A Aromatic-amino-acid ami 99.9 7.2E-22 2.4E-26 173.3 11.1 232 10-258 157-419 (420)
144 3fsl_A Aromatic-amino-acid ami 99.9 8.3E-22 2.8E-26 171.3 11.2 230 11-257 136-396 (397)
145 3k7y_A Aspartate aminotransfer 99.9 5.5E-22 1.9E-26 173.2 9.4 238 5-260 131-404 (405)
146 4eb5_A Probable cysteine desul 99.9 4.8E-20 1.6E-24 159.1 20.0 229 16-263 111-375 (382)
147 3meb_A Aspartate aminotransfer 99.9 1.1E-21 3.8E-26 173.6 9.9 230 15-261 168-444 (448)
148 1uu1_A Histidinol-phosphate am 99.9 8.7E-22 3E-26 167.7 8.6 194 40-257 138-334 (335)
149 2bkw_A Alanine-glyoxylate amin 99.9 2.1E-20 7.3E-25 161.5 17.0 227 16-260 108-383 (385)
150 2zy4_A L-aspartate beta-decarb 99.8 2.6E-20 8.8E-25 168.5 18.0 234 16-262 216-523 (546)
151 1jg8_A L-ALLO-threonine aldola 99.8 1.3E-20 4.3E-25 161.0 15.0 233 16-261 100-346 (347)
152 1cs1_A CGS, protein (cystathio 99.8 1.7E-20 5.9E-25 162.8 16.0 224 14-257 113-383 (386)
153 4eu1_A Mitochondrial aspartate 99.8 1.8E-21 6.2E-26 170.1 9.9 230 11-258 146-408 (409)
154 2rfv_A Methionine gamma-lyase; 99.8 1.8E-20 6.3E-25 163.3 14.9 226 14-257 125-396 (398)
155 1pff_A Methionine gamma-lyase; 99.8 4.3E-20 1.5E-24 156.8 16.5 222 16-257 61-330 (331)
156 1e5e_A MGL, methionine gamma-l 99.8 6.9E-20 2.4E-24 160.1 17.5 226 13-263 122-397 (404)
157 1wyu_B Glycine dehydrogenase s 99.8 5.8E-20 2E-24 163.7 17.0 226 14-260 174-440 (474)
158 3pj0_A LMO0305 protein; struct 99.8 5.7E-20 2E-24 157.6 14.6 226 17-257 113-358 (359)
159 3ffr_A Phosphoserine aminotran 99.8 2.9E-20 9.9E-25 159.3 11.6 218 17-258 106-361 (362)
160 7aat_A Aspartate aminotransfer 99.8 2.1E-20 7.3E-25 162.8 10.4 235 7-258 134-400 (401)
161 1gc0_A Methionine gamma-lyase; 99.8 2E-19 6.8E-24 156.8 16.5 223 14-257 126-397 (398)
162 3vax_A Putative uncharacterize 99.8 1.3E-19 4.6E-24 157.4 15.4 223 16-260 132-399 (400)
163 2dkj_A Serine hydroxymethyltra 99.8 7.1E-20 2.4E-24 159.5 13.7 215 26-260 150-387 (407)
164 1ibj_A CBL, cystathionine beta 99.8 2.3E-20 7.9E-25 165.6 10.6 227 14-260 193-461 (464)
165 4h51_A Aspartate aminotransfer 99.8 1E-19 3.5E-24 159.2 12.2 241 5-263 146-419 (420)
166 3mc6_A Sphingosine-1-phosphate 99.8 3.6E-20 1.2E-24 165.9 9.1 235 13-263 175-439 (497)
167 3lws_A Aromatic amino acid bet 99.8 1.5E-19 5E-24 155.0 12.5 229 17-258 112-356 (357)
168 2vi8_A Serine hydroxymethyltra 99.8 1.3E-19 4.4E-24 157.8 12.3 218 26-262 150-388 (405)
169 1svv_A Threonine aldolase; str 99.8 1.5E-19 5.3E-24 154.6 12.5 227 15-261 111-358 (359)
170 1v72_A Aldolase; PLP-dependent 99.8 2.7E-19 9.1E-24 153.0 13.8 222 17-261 108-353 (356)
171 3qhx_A Cystathionine gamma-syn 99.8 3.8E-19 1.3E-23 154.8 13.3 222 14-254 127-391 (392)
172 3a9z_A Selenocysteine lyase; P 99.8 4.3E-18 1.5E-22 149.6 19.0 229 16-262 147-429 (432)
173 2oga_A Transaminase; PLP-depen 99.8 8.3E-19 2.8E-23 152.8 14.0 221 16-261 123-396 (399)
174 2cb1_A O-acetyl homoserine sul 99.8 5.6E-18 1.9E-22 148.3 18.8 219 13-256 116-411 (412)
175 1mdo_A ARNB aminotransferase; 99.8 1E-18 3.6E-23 151.5 13.3 225 15-262 98-387 (393)
176 3cog_A Cystathionine gamma-lya 99.8 1E-18 3.4E-23 152.6 12.9 224 14-257 127-398 (403)
177 3uwc_A Nucleotide-sugar aminot 99.8 1.3E-18 4.4E-23 150.0 13.3 224 13-260 95-370 (374)
178 1w23_A Phosphoserine aminotran 99.8 2.4E-18 8.3E-23 147.4 14.5 219 16-260 113-359 (360)
179 3ndn_A O-succinylhomoserine su 99.8 7.1E-19 2.4E-23 154.0 11.0 225 14-258 142-413 (414)
180 2fnu_A Aminotransferase; prote 99.8 2E-18 6.7E-23 148.7 13.3 225 16-261 94-372 (375)
181 1b9h_A AHBA synthase, protein 99.8 2.1E-18 7.3E-23 149.5 13.4 226 15-260 97-387 (388)
182 3ecd_A Serine hydroxymethyltra 99.8 5.4E-18 1.9E-22 148.3 15.9 218 27-261 160-397 (425)
183 1ax4_A Tryptophanase; tryptoph 99.8 6.3E-18 2.1E-22 150.1 16.1 224 27-261 168-441 (467)
184 3dr4_A Putative perosamine syn 99.8 2.3E-18 8E-23 149.4 12.9 224 13-258 113-390 (391)
185 1n8p_A Cystathionine gamma-lya 99.8 7.1E-19 2.4E-23 153.1 9.7 227 12-257 113-391 (393)
186 2oqx_A Tryptophanase; lyase, p 99.8 5.4E-18 1.9E-22 150.4 15.1 226 27-262 168-443 (467)
187 3frk_A QDTB; aminotransferase, 99.8 6.5E-18 2.2E-22 145.7 15.1 221 16-261 96-368 (373)
188 2qma_A Diaminobutyrate-pyruvat 99.8 7.7E-18 2.6E-22 150.9 16.0 230 19-261 228-496 (497)
189 3acz_A Methionine gamma-lyase; 99.8 3E-18 1E-22 148.9 12.5 219 14-259 120-387 (389)
190 2c0r_A PSAT, phosphoserine ami 99.8 6.6E-18 2.3E-22 145.0 14.5 202 38-261 140-361 (362)
191 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.9E-18 6.6E-23 152.9 11.5 225 27-261 159-431 (456)
192 2aeu_A Hypothetical protein MJ 99.8 5.4E-19 1.9E-23 152.8 7.6 231 15-262 120-372 (374)
193 3gbx_A Serine hydroxymethyltra 99.8 2E-18 6.8E-23 150.9 11.1 217 26-261 156-396 (420)
194 1qgn_A Protein (cystathionine 99.8 1.7E-18 5.7E-23 152.7 10.5 225 13-260 174-444 (445)
195 2z67_A O-phosphoseryl-tRNA(SEC 99.8 1.5E-17 5.1E-22 147.5 16.3 222 16-258 196-455 (456)
196 3h7f_A Serine hydroxymethyltra 99.8 6.2E-18 2.1E-22 149.5 13.0 219 26-261 172-414 (447)
197 2okj_A Glutamate decarboxylase 99.8 3.6E-17 1.2E-21 146.8 17.8 233 19-261 215-502 (504)
198 2dgk_A GAD-beta, GADB, glutama 99.7 1.5E-16 5.1E-21 140.8 20.8 234 16-262 159-435 (452)
199 3hbx_A GAD 1, glutamate decarb 99.7 1.2E-16 4E-21 143.3 20.3 233 16-263 174-446 (502)
200 3n0l_A Serine hydroxymethyltra 99.7 2.6E-17 8.8E-22 143.8 15.5 217 26-261 151-389 (417)
201 3bwn_A AT1G70560, L-tryptophan 99.7 3.1E-19 1.1E-23 155.2 3.3 222 12-260 135-386 (391)
202 3nmy_A Xometc, cystathionine g 99.7 9.4E-18 3.2E-22 146.2 12.3 224 15-259 129-397 (400)
203 2po3_A 4-dehydrase; external a 99.7 2.4E-17 8.3E-22 144.6 14.2 225 14-261 108-386 (424)
204 2fyf_A PSAT, phosphoserine ami 99.7 1.1E-17 3.6E-22 145.7 10.4 202 38-260 163-397 (398)
205 2jis_A Cysteine sulfinic acid 99.7 8E-17 2.8E-21 144.9 15.7 230 19-260 229-514 (515)
206 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.2E-17 4.2E-22 147.6 9.7 201 38-261 144-353 (446)
207 3nyt_A Aminotransferase WBPE; 99.7 3E-17 1E-21 141.3 11.7 217 15-258 94-361 (367)
208 1o69_A Aminotransferase; struc 99.7 2.6E-16 8.9E-21 136.8 16.5 228 14-260 90-386 (394)
209 2fq6_A Cystathionine beta-lyas 99.7 2.9E-17 9.9E-22 143.8 9.0 227 14-256 143-413 (415)
210 2ctz_A O-acetyl-L-homoserine s 99.7 2.2E-16 7.4E-21 138.6 14.5 221 15-258 120-420 (421)
211 2c81_A Glutamine-2-deoxy-scyll 99.7 1.7E-16 5.7E-21 139.0 11.9 229 15-261 101-414 (418)
212 1rv3_A Serine hydroxymethyltra 99.7 2E-16 7E-21 141.1 11.5 215 26-260 180-430 (483)
213 4e1o_A HDC, histidine decarbox 99.7 4.6E-15 1.6E-19 132.3 20.0 234 17-263 209-480 (481)
214 3ri6_A O-acetylhomoserine sulf 99.7 8.8E-16 3E-20 134.9 15.1 220 14-258 143-429 (430)
215 1js3_A DDC;, DOPA decarboxylas 99.7 3.2E-15 1.1E-19 133.4 17.5 233 16-264 202-477 (486)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.7 5.5E-15 1.9E-19 128.1 18.5 218 16-254 100-389 (390)
217 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 6.3E-15 2.1E-19 129.8 19.1 222 16-259 130-434 (437)
218 3k40_A Aromatic-L-amino-acid d 99.7 2.9E-15 9.8E-20 133.4 16.9 236 16-264 202-474 (475)
219 2hox_A ALLIIN lyase 1; cystein 99.7 5E-17 1.7E-21 142.9 5.0 216 17-260 176-424 (427)
220 3vp6_A Glutamate decarboxylase 99.6 2.7E-15 9.2E-20 134.7 15.5 233 19-261 218-505 (511)
221 2a7v_A Serine hydroxymethyltra 99.6 2.6E-15 9E-20 133.5 15.0 217 26-260 190-440 (490)
222 3ht4_A Aluminum resistance pro 99.6 6.2E-15 2.1E-19 129.5 16.2 199 11-223 133-345 (431)
223 2vyc_A Biodegradative arginine 99.6 4.1E-15 1.4E-19 138.9 14.7 228 27-261 291-605 (755)
224 1wyu_A Glycine dehydrogenase ( 99.6 8.5E-14 2.9E-18 122.6 18.3 216 16-258 174-437 (438)
225 1c4k_A Protein (ornithine deca 99.6 4.3E-14 1.5E-18 131.1 16.9 228 27-261 255-566 (730)
226 3ju7_A Putative PLP-dependent 99.5 7.5E-14 2.6E-18 120.7 14.2 227 15-260 97-374 (377)
227 3i16_A Aluminum resistance pro 99.5 4E-14 1.4E-18 123.9 11.5 197 12-223 143-356 (427)
228 3e77_A Phosphoserine aminotran 99.5 7.3E-14 2.5E-18 120.3 12.2 212 28-261 142-375 (377)
229 3qm2_A Phosphoserine aminotran 99.5 3.5E-14 1.2E-18 122.8 9.9 211 27-261 155-385 (386)
230 3jzl_A Putative cystathionine 99.5 1.6E-13 5.5E-18 119.7 13.8 196 12-224 128-340 (409)
231 3hvy_A Cystathionine beta-lyas 99.5 7.3E-14 2.5E-18 122.3 11.4 197 12-223 144-356 (427)
232 3m5u_A Phosphoserine aminotran 99.4 1.2E-12 3.9E-17 112.3 12.8 200 38-261 138-360 (361)
233 3n75_A LDC, lysine decarboxyla 99.4 3.6E-12 1.2E-16 117.6 15.6 225 27-260 281-559 (715)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 5.2E-12 1.8E-16 109.5 15.1 227 27-264 201-464 (501)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.3 2.4E-11 8.3E-16 106.1 14.4 224 27-264 183-446 (450)
236 3ou5_A Serine hydroxymethyltra 99.1 5.6E-09 1.9E-13 90.4 15.6 210 27-259 191-439 (490)
237 1vhx_A Putative holliday junct 79.8 3.4 0.00012 30.0 5.3 57 27-84 43-101 (150)
238 1hvx_A Alpha-amylase; hydrolas 70.6 9.4 0.00032 33.7 6.7 81 3-87 2-108 (515)
239 1tks_A 3,4-dihydroxy-2-butanon 65.6 8.1 0.00028 29.5 4.4 36 40-79 159-194 (204)
240 3bzy_B ESCU; auto cleavage pro 63.7 4.4 0.00015 26.2 2.3 22 62-83 28-49 (83)
241 3m0z_A Putative aldolase; MCSG 57.9 11 0.00037 29.3 3.9 62 18-86 160-224 (249)
242 1iv0_A Hypothetical protein; r 57.8 24 0.00082 23.4 5.3 53 27-84 39-96 (98)
243 2vt1_B Surface presentation of 57.3 6.5 0.00022 26.0 2.3 23 61-83 27-49 (93)
244 3t7y_A YOP proteins translocat 57.2 6.2 0.00021 26.3 2.2 23 61-83 42-64 (97)
245 3c01_E Surface presentation of 55.5 6.8 0.00023 26.2 2.2 23 61-83 27-49 (98)
246 3mio_A DHBP synthase, 3,4-dihy 55.2 19 0.00064 27.6 4.8 35 40-78 158-193 (206)
247 3m6y_A 4-hydroxy-2-oxoglutarat 52.8 5.1 0.00018 31.5 1.4 62 18-86 183-247 (275)
248 3mwd_B ATP-citrate synthase; A 51.5 34 0.0012 28.3 6.3 53 23-83 87-140 (334)
249 4gqr_A Pancreatic alpha-amylas 51.2 10 0.00035 32.8 3.3 56 30-86 27-102 (496)
250 1uta_A FTSN, MSGA, cell divisi 51.1 19 0.00064 22.7 3.8 48 209-256 20-68 (81)
251 1x60_A Sporulation-specific N- 50.2 43 0.0015 20.7 5.7 58 199-256 9-68 (79)
252 3pzg_A Mannan endo-1,4-beta-ma 48.6 19 0.00066 30.5 4.4 22 60-81 99-120 (383)
253 1lwj_A 4-alpha-glucanotransfer 48.0 14 0.00049 31.7 3.7 62 26-87 20-96 (441)
254 1snn_A DHBP synthase, 3,4-dihy 47.6 24 0.00081 27.5 4.4 35 40-79 178-212 (227)
255 1g94_A Alpha-amylase; beta-alp 47.3 15 0.00052 31.6 3.7 61 27-87 12-91 (448)
256 1nu0_A Hypothetical protein YQ 47.1 24 0.00081 25.1 4.1 58 27-85 41-100 (138)
257 1g57_A DHBP synthase, 3,4-dihy 46.4 29 0.001 26.8 4.7 34 40-78 167-200 (217)
258 1ht6_A AMY1, alpha-amylase iso 45.2 19 0.00066 30.5 4.0 48 40-87 34-95 (405)
259 4aie_A Glucan 1,6-alpha-glucos 44.1 17 0.0006 31.9 3.7 60 27-86 30-105 (549)
260 1gcy_A Glucan 1,4-alpha-maltot 44.0 22 0.00076 31.4 4.4 62 27-88 34-120 (527)
261 3b1s_B Flagellar biosynthetic 49.9 4.8 0.00016 26.3 0.0 22 62-83 28-49 (87)
262 1wza_A Alpha-amylase A; hydrol 43.4 19 0.00064 31.4 3.8 48 40-87 48-108 (488)
263 1mxg_A Alpha amylase; hyperthe 42.8 22 0.00076 30.5 4.1 79 4-87 7-113 (435)
264 1ua7_A Alpha-amylase; beta-alp 42.3 22 0.00074 30.4 3.9 29 59-87 73-101 (422)
265 2z1k_A (NEO)pullulanase; hydro 42.0 20 0.00069 31.0 3.7 62 26-87 47-123 (475)
266 3edf_A FSPCMD, cyclomaltodextr 41.5 27 0.00091 31.5 4.5 62 26-87 145-225 (601)
267 2jli_A YSCU, YOP proteins tran 41.4 15 0.00051 25.6 2.2 22 62-83 72-93 (123)
268 2guy_A Alpha-amylase A; (beta- 41.3 22 0.00075 30.9 3.8 62 26-87 40-124 (478)
269 2aaa_A Alpha-amylase; glycosid 40.9 26 0.00089 30.4 4.3 62 26-87 40-124 (484)
270 1wzl_A Alpha-amylase II; pullu 40.7 20 0.0007 32.1 3.6 61 27-87 171-246 (585)
271 3bzs_A ESCU; auto cleavage pro 40.0 16 0.00054 26.0 2.2 22 62-83 82-103 (137)
272 1jae_A Alpha-amylase; glycosid 39.9 22 0.00075 30.9 3.6 61 27-87 20-101 (471)
273 1j0h_A Neopullulanase; beta-al 39.0 23 0.00079 31.8 3.7 61 27-87 174-249 (588)
274 2dh2_A 4F2 cell-surface antige 39.0 28 0.00096 29.7 4.1 61 27-87 34-108 (424)
275 2wc7_A Alpha amylase, catalyti 38.7 19 0.00065 31.4 3.0 62 26-87 53-129 (488)
276 3m07_A Putative alpha amylase; 38.5 31 0.0011 31.2 4.4 64 27-90 152-232 (618)
277 1ud2_A Amylase, alpha-amylase; 38.4 22 0.00077 30.8 3.4 61 27-87 21-107 (480)
278 3bh4_A Alpha-amylase; calcium, 38.4 22 0.00077 30.8 3.4 61 27-87 19-105 (483)
279 3ghf_A Septum site-determining 38.1 95 0.0033 21.2 7.4 55 16-78 15-78 (120)
280 2jlj_A YSCU, YOP proteins tran 37.9 18 0.0006 26.0 2.2 22 62-83 81-102 (144)
281 1k4i_A 3,4-dihydroxy-2-butanon 37.8 39 0.0013 26.3 4.3 36 40-79 167-212 (233)
282 2bhu_A Maltooligosyltrehalose 37.6 32 0.0011 31.0 4.4 63 27-89 142-221 (602)
283 1wpc_A Glucan 1,4-alpha-maltoh 37.5 24 0.00081 30.7 3.4 60 27-86 23-108 (485)
284 3vgf_A Malto-oligosyltrehalose 36.8 29 0.00099 30.9 3.9 62 27-88 117-195 (558)
285 1agx_A Glutaminase-asparaginas 36.7 70 0.0024 26.4 6.0 55 18-78 216-273 (331)
286 1k7c_A Rhamnogalacturonan acet 36.3 97 0.0033 23.5 6.6 39 40-78 125-167 (233)
287 1ea9_C Cyclomaltodextrinase; h 35.9 24 0.00083 31.6 3.3 61 27-87 170-245 (583)
288 4aef_A Neopullulanase (alpha-a 35.9 28 0.00094 31.7 3.7 60 27-86 237-311 (645)
289 1zja_A Trehalulose synthase; s 35.7 28 0.00097 30.9 3.7 62 26-87 29-106 (557)
290 1m53_A Isomaltulose synthase; 34.9 30 0.001 30.9 3.7 62 26-87 42-119 (570)
291 2ioj_A Hypothetical protein AF 34.5 76 0.0026 22.1 5.2 51 19-80 54-104 (139)
292 3dhu_A Alpha-amylase; structur 33.7 31 0.0011 29.6 3.5 60 27-86 28-109 (449)
293 3aj7_A Oligo-1,6-glucosidase; 33.5 32 0.0011 30.8 3.7 62 26-87 37-114 (589)
294 3b0z_B Flagellar biosynthetic 39.7 8.9 0.0003 26.4 0.0 23 62-84 28-50 (114)
295 1uok_A Oligo-1,6-glucosidase; 33.2 33 0.0011 30.5 3.7 62 26-87 28-105 (558)
296 4a1f_A DNAB helicase, replicat 32.5 85 0.0029 25.9 5.9 54 27-80 139-202 (338)
297 2him_A L-asparaginase 1; hydro 32.3 1.1E+02 0.0038 25.5 6.5 47 27-78 242-288 (358)
298 2zic_A Dextran glucosidase; TI 32.3 34 0.0012 30.3 3.6 62 26-87 28-105 (543)
299 1ji1_A Alpha-amylase I; beta/a 32.2 41 0.0014 30.5 4.2 63 26-88 188-270 (637)
300 2dvt_A Thermophilic reversible 31.9 64 0.0022 25.9 5.1 52 28-80 110-164 (327)
301 1m7x_A 1,4-alpha-glucan branch 31.9 48 0.0016 29.9 4.6 61 27-87 153-231 (617)
302 3bgk_A SMU.573, putative uncha 31.8 1.2E+02 0.004 24.7 6.6 60 13-81 101-162 (311)
303 2ze0_A Alpha-glucosidase; TIM 31.3 36 0.0012 30.2 3.6 62 26-87 28-105 (555)
304 4aee_A Alpha amylase, catalyti 30.9 31 0.0011 31.7 3.2 61 27-87 263-338 (696)
305 3eww_A Ompdecase, orotidine-5' 30.8 98 0.0034 24.5 5.7 64 20-87 35-99 (260)
306 3rst_A Signal peptide peptidas 30.4 54 0.0018 25.5 4.1 56 27-83 30-90 (240)
307 2r3b_A YJEF-related protein; p 30.4 1.4E+02 0.0048 24.2 6.8 60 13-81 87-148 (310)
308 3pzt_A Endoglucanase; alpha/be 30.1 36 0.0012 27.9 3.2 51 27-81 70-125 (327)
309 4aio_A Limit dextrinase; hydro 30.0 59 0.002 30.5 5.0 46 42-87 360-405 (884)
310 3g3d_A UMP synthase, uridine 5 29.4 1E+02 0.0035 25.2 5.7 64 20-87 87-151 (312)
311 1qwg_A PSL synthase;, (2R)-pho 29.2 43 0.0015 26.4 3.3 66 14-83 9-77 (251)
312 3nl6_A Thiamine biosynthetic b 29.0 57 0.0019 29.0 4.4 49 28-81 28-76 (540)
313 2e8y_A AMYX protein, pullulana 28.8 48 0.0016 30.6 4.1 29 60-88 315-343 (718)
314 3o63_A Probable thiamine-phosp 28.5 45 0.0015 26.2 3.3 53 28-83 46-105 (243)
315 2lbw_A H/ACA ribonucleoprotein 28.2 1.2E+02 0.0041 20.7 5.2 45 28-80 25-69 (121)
316 3bc9_A AMYB, alpha amylase, ca 27.9 44 0.0015 30.1 3.6 29 58-86 206-234 (599)
317 3dc7_A Putative uncharacterize 27.7 78 0.0027 23.8 4.7 41 38-78 127-178 (232)
318 2whl_A Beta-mannanase, baman5; 27.6 47 0.0016 26.5 3.4 23 59-81 62-84 (294)
319 4ggi_A UDP-2,3-diacylglucosami 27.6 61 0.0021 26.0 4.1 51 19-78 223-275 (283)
320 7a3h_A Endoglucanase; hydrolas 27.6 42 0.0014 27.0 3.2 22 60-81 79-100 (303)
321 3vup_A Beta-1,4-mannanase; TIM 27.6 43 0.0015 26.6 3.3 23 61-83 90-112 (351)
322 3irs_A Uncharacterized protein 27.5 70 0.0024 25.5 4.5 50 28-80 108-157 (291)
323 1bqc_A Protein (beta-mannanase 27.4 49 0.0017 26.5 3.6 22 59-80 63-84 (302)
324 3mfq_A TROA, high-affinity zin 26.9 32 0.0011 27.6 2.3 26 58-83 196-221 (282)
325 2wan_A Pullulanase; hydrolase, 26.6 57 0.002 31.1 4.3 31 60-90 531-561 (921)
326 1tvn_A Cellulase, endoglucanas 26.5 47 0.0016 26.4 3.3 21 61-81 79-99 (293)
327 1qho_A Alpha-amylase; glycosid 26.5 48 0.0016 30.3 3.6 61 26-86 49-133 (686)
328 3v7e_A Ribosome-associated pro 26.4 1.2E+02 0.0042 18.9 6.1 47 28-83 16-62 (82)
329 3k1d_A 1,4-alpha-glucan-branch 26.3 63 0.0021 29.9 4.3 48 40-87 277-339 (722)
330 1d3c_A Cyclodextrin glycosyltr 26.3 49 0.0017 30.3 3.6 61 26-86 52-141 (686)
331 1cyg_A Cyclodextrin glucanotra 26.0 50 0.0017 30.2 3.6 60 26-85 49-136 (680)
332 3aml_A OS06G0726400 protein; s 26.0 59 0.002 30.2 4.1 48 40-87 215-277 (755)
333 2wsk_A Glycogen debranching en 26.0 54 0.0019 29.9 3.9 28 60-87 241-268 (657)
334 2ya0_A Putative alkaline amylo 26.0 53 0.0018 30.2 3.8 28 60-87 254-281 (714)
335 1nxi_A Conserved hypothetical 25.9 1.7E+02 0.0058 20.4 7.8 61 200-262 43-112 (132)
336 3jug_A Beta-mannanase; TIM-bar 25.9 47 0.0016 27.6 3.2 23 59-81 85-107 (345)
337 3bmv_A Cyclomaltodextrin gluca 25.9 50 0.0017 30.2 3.6 61 26-86 52-142 (683)
338 3czg_A Sucrose hydrolase; (alp 25.8 38 0.0013 30.8 2.8 60 27-86 104-181 (644)
339 3ff4_A Uncharacterized protein 25.5 71 0.0024 21.9 3.6 39 28-79 72-110 (122)
340 3cg6_A Growth arrest and DNA-d 25.4 76 0.0026 22.7 3.7 23 61-83 63-86 (146)
341 2gwg_A 4-oxalomesaconate hydra 25.3 1.1E+02 0.0037 25.0 5.4 51 28-79 125-177 (350)
342 1egz_A Endoglucanase Z, EGZ, C 25.0 53 0.0018 26.1 3.3 21 61-81 77-97 (291)
343 4hty_A Cellulase; (alpha/beta) 24.9 52 0.0018 27.3 3.3 21 61-81 121-141 (359)
344 3kts_A Glycerol uptake operon 24.9 1.3E+02 0.0044 22.6 5.1 43 26-79 17-59 (192)
345 1g5a_A Amylosucrase; glycosylt 24.5 42 0.0014 30.4 2.8 60 27-86 111-188 (628)
346 1g01_A Endoglucanase; alpha/be 24.4 53 0.0018 27.2 3.3 53 27-83 55-112 (364)
347 2xw6_A MGS, methylglyoxal synt 24.2 1.4E+02 0.0047 21.0 4.9 46 30-80 65-111 (134)
348 3p94_A GDSL-like lipase; serin 23.8 1.4E+02 0.0047 21.6 5.3 40 39-78 113-159 (204)
349 1h1y_A D-ribulose-5-phosphate 23.7 1.1E+02 0.0039 23.2 4.9 11 76-86 141-151 (228)
350 2cks_A Endoglucanase E-5; carb 23.5 56 0.0019 26.2 3.2 21 61-81 80-100 (306)
351 3nxk_A Cytoplasmic L-asparagin 23.4 1.2E+02 0.0042 24.9 5.2 61 18-86 221-285 (334)
352 3bh0_A DNAB-like replicative h 23.4 1.9E+02 0.0064 23.3 6.4 53 27-79 163-226 (315)
353 3gdm_A Orotidine 5'-phosphate 23.3 1.6E+02 0.0055 23.3 5.7 64 20-87 33-98 (267)
354 2dn5_A General transcription f 23.2 1.2E+02 0.0041 19.7 3.9 25 27-51 62-86 (89)
355 1qnr_A Endo-1,4-B-D-mannanase; 23.1 56 0.0019 26.5 3.2 22 60-81 89-110 (344)
356 2vr5_A Glycogen operon protein 23.1 74 0.0025 29.4 4.2 27 60-86 266-292 (718)
357 3umo_A 6-phosphofructokinase i 23.1 1.5E+02 0.0051 23.5 5.7 24 58-81 144-167 (309)
358 3nvt_A 3-deoxy-D-arabino-heptu 22.6 81 0.0028 26.6 4.0 59 26-84 260-321 (385)
359 3rjt_A Lipolytic protein G-D-S 22.5 1E+02 0.0034 22.5 4.3 39 40-78 130-172 (216)
360 3twe_A Alpha4H; unknown functi 22.4 46 0.0016 15.5 1.4 15 160-174 11-25 (27)
361 2r2a_A Uncharacterized protein 22.3 26 0.0009 26.5 0.9 24 62-85 76-99 (199)
362 2ale_A SNU13, NHP2/L7AE family 22.3 1.5E+02 0.0051 20.7 4.8 44 29-80 38-81 (134)
363 2aif_A Ribosomal protein L7A; 22.1 2E+02 0.007 20.0 6.3 43 29-79 47-89 (135)
364 2car_A Inosine triphosphate py 22.0 1.8E+02 0.0063 21.8 5.5 66 17-83 9-76 (196)
365 3ju3_A Probable 2-oxoacid ferr 22.0 1.4E+02 0.0049 20.1 4.6 63 11-83 7-75 (118)
366 3n9k_A Glucan 1,3-beta-glucosi 21.9 63 0.0022 27.4 3.3 22 60-81 112-133 (399)
367 4dzi_A Putative TIM-barrel met 21.9 70 0.0024 27.3 3.6 51 28-80 178-230 (423)
368 2f6k_A Metal-dependent hydrola 21.8 95 0.0033 24.5 4.3 48 28-79 106-153 (307)
369 2x4k_A 4-oxalocrotonate tautom 21.8 1.2E+02 0.0041 17.1 4.7 31 233-263 5-35 (63)
370 1bf2_A Isoamylase; hydrolase, 21.8 89 0.003 29.0 4.5 27 60-86 272-298 (750)
371 3e96_A Dihydrodipicolinate syn 21.6 67 0.0023 26.2 3.3 51 27-79 31-86 (316)
372 3fwt_A Macrophage migration in 21.3 1.9E+02 0.0063 20.0 5.2 33 232-264 22-54 (133)
373 1h1n_A Endo type cellulase ENG 21.2 69 0.0024 25.7 3.3 23 61-83 72-94 (305)
374 3pff_A ATP-citrate synthase; p 20.9 1.9E+02 0.0063 27.3 6.3 48 28-83 579-626 (829)
375 3zss_A Putative glucanohydrola 20.8 74 0.0025 29.3 3.6 60 25-84 249-344 (695)
376 1gjw_A Maltodextrin glycosyltr 20.7 63 0.0022 29.2 3.2 28 60-87 181-208 (637)
377 3fxd_A Protein ICMQ; helix bun 20.6 1.2E+02 0.0042 17.7 3.2 19 242-260 5-23 (57)
378 1h4p_A Glucan 1,3-beta-glucosi 20.6 70 0.0024 27.1 3.3 24 60-83 113-136 (408)
379 3dmy_A Protein FDRA; predicted 20.4 1.2E+02 0.0041 26.5 4.7 41 28-78 50-90 (480)
380 3m21_A Probable tautomerase HP 20.4 1.4E+02 0.0049 17.5 4.8 31 233-263 2-35 (67)
381 3ry0_A Putative tautomerase; o 20.3 1.4E+02 0.0048 17.3 4.7 31 233-263 2-32 (65)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=4.2e-39 Score=284.36 Aligned_cols=254 Identities=30% Similarity=0.548 Sum_probs=218.5
Q ss_pred ccCCcC-cccccCCCCCCceeecCCC-----------HHHHHHHHhc------CCCEEEEEEccccCCCCcccCChHHHH
Q psy6547 3 ITTDPT-SYNEFGPHMPGYNIIPYND-----------VDALEAKLKS------NPNICAFMVEPIQGEAGAVVPDDGYLK 64 (266)
Q Consensus 3 ~~~~~~-~~~~~~~~~~~v~~~~~~d-----------~~~l~~~l~~------~~~~~~i~~~~~~~~~g~~~~~~~~l~ 64 (266)
.++++. ....|.|+.+++..+|++. .+.+++.++. ..++++|++||+++.+|.+.+++++++
T Consensus 171 ~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~ 250 (456)
T 4atq_A 171 LTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLP 250 (456)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred cccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhH
Confidence 344443 4566889999999998752 3444443321 237999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcH
Q psy6547 65 KVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNP 144 (266)
Q Consensus 65 ~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (266)
+|+++|++||+++|+||+++||+|+|..|+++.+|+.||+++++|+++|| +|+|.+++++++++.+.+..+++||++||
T Consensus 251 ~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg-~P~~av~~~~~i~~~~~~~~~~~Tf~gnp 329 (456)
T 4atq_A 251 ALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVHPGGLGGTYGGNP 329 (456)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCTTSSCCSSSSCH
T ss_pred HHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCc-CCceeeEecHHHHhcccccCCCCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999 89999999999999999889999999999
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc------CCCcccEEecCccceeeEEEEeeCc-----cchHH
Q psy6547 145 LACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK------SKASFKLSSGGLKKSINTLILSVSA-----ILEVY 213 (266)
Q Consensus 145 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~ 213 (266)
+++++++++|+.++++++.+++++..++++++|++.... +.+.. +++.|+ |+.+++.++. .....
T Consensus 330 la~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~-VRG~Gl---~~giel~~~~~~~~~~~~~~ 405 (456)
T 4atq_A 330 VACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGD-IRGRGA---MLAIELVQPGSKEPNAELTK 405 (456)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEE-EEEETT---EEEEEEBCTTSCCBCHHHHH
T ss_pred HHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEE-eeecce---EEEEEEecCCCCCcCHHHHH
Confidence 999999999999999999999999999999999883221 23455 899999 9999986532 12356
Q ss_pred HHHHHHHHCCceeccCC--CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 214 DVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 214 ~~~~~l~~~gi~~~~~~--~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.++++|+++|+++.+.+ ++.|||+|++.+|++++++++++|+++++..
T Consensus 406 ~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 406 AVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp HHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999998653 5899999999999999999999999998753
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=4.6e-39 Score=285.13 Aligned_cols=256 Identities=26% Similarity=0.497 Sum_probs=222.4
Q ss_pred CccCCcCcccccCCCCCCceeecCCC------------------HHHHHHHHhc-C-CCEEEEEEccccCCCCcccCChH
Q psy6547 2 LITTDPTSYNEFGPHMPGYNIIPYND------------------VDALEAKLKS-N-PNICAFMVEPIQGEAGAVVPDDG 61 (266)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~~~~~~d------------------~~~l~~~l~~-~-~~~~~i~~~~~~~~~g~~~~~~~ 61 (266)
|.++++ .++.|.+..+++++++.++ .+++++.+.+ . +++++|++||+++.+|++.++++
T Consensus 179 s~tg~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~ 257 (473)
T 4e3q_A 179 SMTGKP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKG 257 (473)
T ss_dssp HHSCCG-GGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTT
T ss_pred cccccc-cccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHH
Confidence 344544 5677888889999988763 3456666654 2 37999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhcc-------CCC
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTL-------VPG 134 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~-------~~~ 134 (266)
++++|+++|++||+++|+||+++||||+|..|+++.+++.||+++++|++++|++|+|.+++++++++.+ ...
T Consensus 258 fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~ 337 (473)
T 4e3q_A 258 YFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEF 337 (473)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999998878999999999998765 345
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc-----
Q psy6547 135 THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA----- 208 (266)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~----- 208 (266)
.|++||++||+++++++++|+.++++++.+++++..++++++|++ +.. +.+.. +++.|+ |+.+++..+.
T Consensus 338 ~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~-l~~~~~v~~-vRG~Gl---~~gielv~~~~~~~~ 412 (473)
T 4e3q_A 338 PHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKH-IAERPNIGE-YRGIGF---MWALEAVKDKASKTP 412 (473)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH-HTTSTTEEE-EEEETT---EEEEEECSBTTTTBC
T ss_pred ccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHH-HhcCCCeeE-Eeecce---EEEEEEecCcccccc
Confidence 799999999999999999999999999999999999999999999 544 55655 999999 9999985421
Q ss_pred ----cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 209 ----ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 209 ----~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
......+++.++++|+++++. ++.+|++|++.+|++++|+++++|+++++++..+
T Consensus 413 ~~~~~~~~~~~~~~~~~~Gll~~~~-g~~i~l~PPL~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 413 FDGNLSVSERIANTCTDLGLICRPL-GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp CCGGGCHHHHHHHHHHHTTEECEEE-TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHCCcEEEec-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 123567999999999999987 4799999999999999999999999999987654
No 3
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=3.8e-38 Score=281.29 Aligned_cols=257 Identities=25% Similarity=0.497 Sum_probs=223.2
Q ss_pred CccCCcCcccccCCCCCCceeecCCC----------------HHHHHHHHhc-C-CCEEEEEEccccCCCCcccCChHHH
Q psy6547 2 LITTDPTSYNEFGPHMPGYNIIPYND----------------VDALEAKLKS-N-PNICAFMVEPIQGEAGAVVPDDGYL 63 (266)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~~~~~~d----------------~~~l~~~l~~-~-~~~~~i~~~~~~~~~g~~~~~~~~l 63 (266)
++++.+..+..|.|...++..++++. +++|++++++ . +++++|++||+++++|.++++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L 244 (476)
T 3i5t_A 165 ACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYH 244 (476)
T ss_dssp HTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred cccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHH
Confidence 35667777778899999998888543 8899999964 2 4799999999999999988999999
Q ss_pred HHHHHHHHhcCCEEEEeccccCcCCcCcccccc-cCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC-------C
Q psy6547 64 KKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH-YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG-------T 135 (266)
Q Consensus 64 ~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~-~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~-------~ 135 (266)
++|+++|++||++||+||+|+||+++|..++.+ .+++.||++++||++++|++|+|++++++++++.+... .
T Consensus 245 ~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~ 324 (476)
T 3i5t_A 245 ARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFT 324 (476)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEEC
T ss_pred HHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCccccccc
Confidence 999999999999999999999999999877888 88999999999999999867999999999999888753 6
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCcc-----
Q psy6547 136 HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAI----- 209 (266)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~----- 209 (266)
+..++++++++++++.++|+.++.+++.++++++.+++++.|++ +.. +.+.. .++.|. |+++++.....
T Consensus 325 ~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~v~~-v~~~G~---~~~i~~~~~~~~~~~~ 399 (476)
T 3i5t_A 325 NGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALAS-LRDLPGVAE-TRSVGL---VGCVQCLLDPTRADGT 399 (476)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT-TTTSTTEEE-EEEETT---EEEEEECCC-----CC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EEecCc---eeEEEEecCccccccc
Confidence 77899999999999999999998889999999999999999997 653 34444 788999 99999875210
Q ss_pred ----chHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 210 ----LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 210 ----~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
....++++.|+++||++++.+ +++|++|++.+|++++++++++|+++++++..+
T Consensus 400 ~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 400 AEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 025678999999999999975 999999999999999999999999999887543
No 4
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=7.2e-38 Score=276.47 Aligned_cols=247 Identities=49% Similarity=0.912 Sum_probs=210.4
Q ss_pred cccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 9 SYNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 9 ~~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
....|.|...+++.+|++|+++|+++++ .+++++|++||+++++|.+.++++++++|+++|++||++||+||+|+||++
T Consensus 182 ~~~~~~p~~~~v~~~~~~d~~~le~~l~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~ 260 (433)
T 1z7d_A 182 CTSNFGPFAPQFSKVPYDDLEALEEELK-DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGR 260 (433)
T ss_dssp ----------CEEEECTTCHHHHHHHHT-STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccccCCCCCCCeEEeCCCCHHHHHHHhC-CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCc
Confidence 3344667778999999999999999995 347999999999999998889999999999999999999999999999998
Q ss_pred cCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q psy6547 89 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYK 168 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 168 (266)
.|..++++.+++.||++++||++++|++|+|++++++++++.+....+..++++++++++++.++|+.++.+++.+++++
T Consensus 261 ~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 261 TGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 88877777788999999999999988569999999999998888767888999999999999999999887889999999
Q ss_pred HHHHHHHHhhccc--ccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHH
Q psy6547 169 MGEIFRSELSSPA--NKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 246 (266)
Q Consensus 169 ~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~ 246 (266)
++++++++|++ + +.+.+.. .++.|. ++++.++.. ..+..+++++|+++||++.+.+.+++|+++++.+|+++
T Consensus 341 ~~~~l~~~L~~-l~~~~~~~~~-~~~~g~---~~~i~~~~~-~~~~~~~~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~ 414 (433)
T 1z7d_A 341 LGGPFLENLKR-ELKDSKIVRD-VRGKGL---LCAIEFKNE-LVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQ 414 (433)
T ss_dssp HHHHHHHHHHH-HHTTCTTEEE-EEEETT---EEEEEECTT-TCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHH-HHHhCCCeEE-EEeeee---EEEEEEccC-hhHHHHHHHHHHHCCeEEecCCCCEEEEECCcCCCHHH
Confidence 99999999988 5 2233333 677888 999998751 13578899999999999999878999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6547 247 LREGLDIIINTINTMA 262 (266)
Q Consensus 247 i~~~~~~l~~~~~~~~ 262 (266)
+++++++|+++++++.
T Consensus 415 i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 415 LDECTEIIVKTVKFFD 430 (433)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988753
No 5
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=8.1e-38 Score=276.60 Aligned_cols=246 Identities=57% Similarity=1.006 Sum_probs=216.6
Q ss_pred cccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 9 SYNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 9 ~~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
....|.|+..+++.++++|+++|+++++ .+++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+||++
T Consensus 193 ~~~~~~p~~~~v~~~~~~d~~~le~~l~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~ 271 (439)
T 2oat_A 193 SYDGFGPFMPGFDIIPYNDLPALERALQ-DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 271 (439)
T ss_dssp HHTTSCSCCTTEEEECSSCHHHHHHHTT-STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred cccCCCCCCCCeEEeCCCCHHHHHHHhC-CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcc
Confidence 3455778888999999999999999995 347999999999999998889999999999999999999999999999998
Q ss_pred cCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q psy6547 89 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYK 168 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 168 (266)
+|..+.++.+++.||++++||++++|++|+|++++++++++.+....+..++++++++++++.++|+.++.+++.+++++
T Consensus 272 ~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 88877778888999999999999987579999999999998888777888999999999999999999888889999999
Q ss_pred HHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHH
Q psy6547 169 MGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELR 248 (266)
Q Consensus 169 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~ 248 (266)
+++++++.|++ ++.+.+.. .++.|. ++++.++...+.+..+++++|+++||.+.+.+.+++|+++++.+|+++++
T Consensus 352 ~~~~l~~~L~~-l~~~~~~~-~~~~g~---~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~ 426 (439)
T 2oat_A 352 LGIILRNELMK-LPSDVVTA-VRGKGL---LNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELR 426 (439)
T ss_dssp HHHHHHHHHTT-SCTTTEEE-EEEETT---EEEEEECCCSSCCHHHHHHHHHHTTEECCBSSSSEEEECCCTTCCHHHHH
T ss_pred HHHHHHHHHHH-hcCCCcEE-EEeeee---EEEEEEecCccHHHHHHHHHHHHCCeEEecCCCCEEEEECccCCCHHHHH
Confidence 99999999998 54333333 667888 99999876211357889999999999999987899999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy6547 249 EGLDIIINTINT 260 (266)
Q Consensus 249 ~~~~~l~~~~~~ 260 (266)
+++++|++++++
T Consensus 427 ~~l~~l~~~l~~ 438 (439)
T 2oat_A 427 ESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=7.5e-38 Score=279.02 Aligned_cols=253 Identities=25% Similarity=0.437 Sum_probs=216.2
Q ss_pred ccCCcCcccccCCCCCCceeecCCC-----------------HHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHH
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPYND-----------------VDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYL 63 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~d-----------------~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l 63 (266)
+++.+..+..|. ..++++.++.+. +++|++++++. +++++|++||+++++|.+.++++++
T Consensus 168 ~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l 246 (472)
T 3hmu_A 168 LGGMAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYW 246 (472)
T ss_dssp HSCCHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHH
T ss_pred ccCChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHH
Confidence 344555556677 677888887543 78999998642 4799999999999999998999999
Q ss_pred HHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCC--CCCCCCCC
Q psy6547 64 KKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP--GTHGSTYG 141 (266)
Q Consensus 64 ~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~--~~~~~~~~ 141 (266)
++|+++|++||+++|+||+|+||+++|..++.+.+++.||++++||++++|++|+|++++++++++.+.. ..+..+++
T Consensus 247 ~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~ 326 (472)
T 3hmu_A 247 PEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYS 326 (472)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTT
T ss_pred HHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCC
Confidence 9999999999999999999999999998778888899999999999999764799999999999988842 36788999
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCcc----------
Q psy6547 142 GNPLACKLAMTALDVILEENMIENAY-KMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAI---------- 209 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~---------- 209 (266)
+++++++++.++|+.++.+++.++++ ++.+++++.|++ +.. +.+.. +++.|+ |+++.+.....
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~v~~-vr~~G~---~~~i~~~~~~~~~~~~~~~~~ 401 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEA-LTDHPLVGE-AKIVGM---MASIALTPNKASRAKFASEPG 401 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHG-GGGSTTEEE-EEEETT---EEEEEECSCGGGTCCBSSCTT
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EEecCc---eEEEEEecCccccccccchhH
Confidence 99999999999999998888999999 999999999988 543 34444 788999 99999874210
Q ss_pred chHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 210 LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 210 ~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
....++++.|+++||++++.+ +++|++|++.+|++++++++++|+++++++.
T Consensus 402 ~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 402 TIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 116788999999999999986 9999999999999999999999999987764
No 7
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=1.3e-37 Score=276.45 Aligned_cols=249 Identities=27% Similarity=0.456 Sum_probs=212.3
Q ss_pred CcCcccccCCCCCCceeecC-------CCHHHHHHHHhcC-CCEEEEEEcc-ccCCCCcccCChHHHHHHHHHHHhcCCE
Q psy6547 6 DPTSYNEFGPHMPGYNIIPY-------NDVDALEAKLKSN-PNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQYNVL 76 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~l~~~-~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~~~~g~~ 76 (266)
++.....|.|+..++..++. +|+++|+++++++ +++++|++|| +++++|.+.++++++++|+++|++||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gil 270 (457)
T 3tfu_A 191 HGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVL 270 (457)
T ss_dssp C----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCE
T ss_pred cccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 45556678888888888886 4899999999643 4799999999 8999999988999999999999999999
Q ss_pred EEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccC---CC--CCCCCCCCcHHHHHHHH
Q psy6547 77 FIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLV---PG--THGSTYGGNPLACKLAM 151 (266)
Q Consensus 77 li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~a~~ 151 (266)
+|+||+|+||+++|..++.+.+++.||+++|||+++||++|+|++++++++++.+. .. .+..++++++++++++.
T Consensus 271 lI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~ 350 (457)
T 3tfu_A 271 LIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSV 350 (457)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHH
T ss_pred EEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHH
Confidence 99999999999999888888889999999999999998569999999999988873 32 67899999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC
Q psy6547 152 TALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS 230 (266)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 230 (266)
++|+.++.+++.+++++++++++++|++ +.. +.+.. .++.|+ |+++.+.+ ..++.++++.|+++||++++.
T Consensus 351 aaL~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~v~~-vr~~G~---~~~i~l~~--~~~~~~~~~~l~~~Gv~v~~~- 422 (457)
T 3tfu_A 351 ASVELLLGQDWRTRITELAAGLTAGLDT-ARALPAVTD-VRVCGA---IGVIECDR--PVDLAVATPAALDRGVWLRPF- 422 (457)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHHGG-GGGSTTEEE-EEECSS---CEEEEESS--CCCHHHHHHHHHHTTEECCCB-
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhcCCCeee-eecCCe---EEEEEECC--cccHHHHHHHHHHCCeEEEec-
Confidence 9999998889999999999999999998 543 44444 788899 99999976 446789999999999999987
Q ss_pred CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 ~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
++++|+++++.+|++++++++++|+++++++.
T Consensus 423 ~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 423 RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999998753
No 8
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=4.5e-37 Score=272.54 Aligned_cols=257 Identities=30% Similarity=0.518 Sum_probs=209.6
Q ss_pred CccCCcCcccccCCCCCCceeecCCC----------------HHHHHHHHhcC-CCEEEEEEcccc-CCCCcccCChHHH
Q psy6547 2 LITTDPTSYNEFGPHMPGYNIIPYND----------------VDALEAKLKSN-PNICAFMVEPIQ-GEAGAVVPDDGYL 63 (266)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~v~~~~~~d----------------~~~l~~~l~~~-~~~~~i~~~~~~-~~~g~~~~~~~~l 63 (266)
++++.+.....|.|..+++..+++++ +++|+++++++ +++++|++||++ +++|.+.++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l 234 (448)
T 3dod_A 155 SVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYL 234 (448)
T ss_dssp ------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHH
T ss_pred HhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHH
Confidence 34556666677888888999998876 89999999642 378999999998 9999998999999
Q ss_pred HHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCC-------CCC
Q psy6547 64 KKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-------GTH 136 (266)
Q Consensus 64 ~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~-------~~~ 136 (266)
++|+++|++||++||+||+|+||+++|..++...+++.||++++||++++|++|+|++++++++++.+.. ..+
T Consensus 235 ~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~ 314 (448)
T 3dod_A 235 AGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFH 314 (448)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCC
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccc
Confidence 9999999999999999999999999998878888899999999999999993399999999999998876 567
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccc-----
Q psy6547 137 GSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAIL----- 210 (266)
Q Consensus 137 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~----- 210 (266)
..++++++++++++.++|+.++.+++.++++++.+++++.|++ +.. +.+.. .++.|. ++++.+......
T Consensus 315 ~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~ 389 (448)
T 3dod_A 315 GHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGD-IRQLGF---MCGAELVRSKETKEPYP 389 (448)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEE-EEEETT---EEEEEECSBTTTTBCCC
T ss_pred cCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EEeeeE---EEEEEEccCcccccccc
Confidence 8999999999999999999988888999999999999999988 654 33444 678899 999998762100
Q ss_pred ----hHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 211 ----EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 211 ----~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
.+.++++.|+++||.+.|.+ +++|++|++.+|++++++++++|+++++++.+.
T Consensus 390 ~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 446 (448)
T 3dod_A 390 ADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMVAIMKQAIHEVTSL 446 (448)
T ss_dssp GGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 14789999999999999984 999999999999999999999999999887643
No 9
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=5.1e-37 Score=273.03 Aligned_cols=257 Identities=26% Similarity=0.433 Sum_probs=219.7
Q ss_pred ccCCcCcccccCCCCCCceeecCC------C------------HHHHHHHHhc-C-CCEEEEEEccccCCCCcccCChHH
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPYN------D------------VDALEAKLKS-N-PNICAFMVEPIQGEAGAVVPDDGY 62 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~------d------------~~~l~~~l~~-~-~~~~~i~~~~~~~~~g~~~~~~~~ 62 (266)
+++.+.....|.|...++..++.+ | +++|++++++ . +++++|++||+++++|.+.+++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~ 243 (460)
T 3gju_A 164 LTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGY 243 (460)
T ss_dssp HCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTH
T ss_pred ccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHH
Confidence 355666677788888899888743 3 6899999864 2 479999999999999998899999
Q ss_pred HHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhcc-------CCCC
Q psy6547 63 LKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTL-------VPGT 135 (266)
Q Consensus 63 l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~-------~~~~ 135 (266)
+++|+++|++||++||+||+|++|+++|..+..+.+++.||++++||++++|++|+|++++++++++.+ ....
T Consensus 244 l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 244 WEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccc
Confidence 999999999999999999999999999987777888999999999999998856999999999998888 4456
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc------
Q psy6547 136 HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA------ 208 (266)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~------ 208 (266)
+..++++++++++++.++|+.++.+++.++++++.++++++|.+.+.. +.+.. +++.|. |+++.+....
T Consensus 324 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~ 399 (460)
T 3gju_A 324 HGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGE-VRGDGM---LAAVEFVADKDDRVFF 399 (460)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEE-EEEETT---EEEEEECSBTTTTBCC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EeeeeE---EEEEEEccCccccccc
Confidence 889999999999999999999888889999999999999999663443 33444 788899 9999987521
Q ss_pred ---cchHHHHHHHHHHCCceeccCC-CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 209 ---ILEVYDVCIKMKDAGLVTKPIS-NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 209 ---~~~~~~~~~~l~~~gi~~~~~~-~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.....++++.|+++||++++.+ .+++|++|++.+|++++++++++|+++++++..
T Consensus 400 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 400 DASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1126689999999999999874 489999999999999999999999999988653
No 10
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.8e-37 Score=268.47 Aligned_cols=248 Identities=29% Similarity=0.532 Sum_probs=220.1
Q ss_pred cCCcCcccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 4 TTDPTSYNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
++++.....+.|...++..++++|+++|++++ .+++++|+++|+++++|.+.++++++++|+++|++||+++|+||+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~ 222 (395)
T 3nx3_A 145 TANEKYQKPFKPLISGVKFAKYNDISSVEKLV--NEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQ 222 (395)
T ss_dssp CCCHHHHGGGCSCCSCEEEECTTCHHHHHTTC--CTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred cCCcccccccCCCCCCcEEeCCCCHHHHHHhc--cCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 44455566778889999999999999999999 4579999999999999999999999999999999999999999999
Q ss_pred cCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHh-hhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccH
Q psy6547 84 TGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEV-MGTLVPGTHGSTYGGNPLACKLAMTALDVILEENM 162 (266)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 162 (266)
++|++.|..+..+.+++.+|+.++||++++| +|+|++++++++ .+.+....+..++++++++++++.++++.++.+++
T Consensus 223 ~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~ 301 (395)
T 3nx3_A 223 CGMGRSGKFFAYEHAQILPDIMTSAKALGCG-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKI 301 (395)
T ss_dssp TTTTTTSSSSGGGGGTCCCSEEEECGGGTTT-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTH
T ss_pred cCCCcCCcchhHHhcCCCCCEEEecccccCC-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHH
Confidence 9999888877778889999999999999999 899999999998 88888777889999999999999999998877889
Q ss_pred HHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCC
Q psy6547 163 IENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALN 241 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~ 241 (266)
.++++++.+++++.|++.... +.+.. .++.|. ++++.++. ..+..++++.|+++||.+++++.+++|+++++.
T Consensus 302 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~---~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~~~iRi~~~~~ 375 (395)
T 3nx3_A 302 LENVNKLTPYLEQSLDELINEFDFCKK-RKGLGF---MQGLSLDK--SVKVAKVIQKCQENALLLISCGENDLRFLPPLI 375 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETT---EEEEEECT--TSCHHHHHHHHHHTTEECEEETTTEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEE-EEeEEE---EEEEEeCC--cchHHHHHHHHHHCCCEEecCCCCEEEEECCCC
Confidence 999999999999999873322 33333 677888 99999876 446788999999999999998889999999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINT 260 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~ 260 (266)
+|++++++++++|++++++
T Consensus 376 ~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 376 LQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999998864
No 11
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=6.4e-37 Score=271.86 Aligned_cols=255 Identities=33% Similarity=0.544 Sum_probs=218.0
Q ss_pred cCCc-CcccccCCCCCCceeecCC----C-------------HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHH
Q psy6547 4 TTDP-TSYNEFGPHMPGYNIIPYN----D-------------VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKK 65 (266)
Q Consensus 4 ~~~~-~~~~~~~~~~~~v~~~~~~----d-------------~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~ 65 (266)
++++ .....|.|+..++..++++ | +++|++.+. ..++++|++||+++++|.+.++++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~ 250 (453)
T 4ffc_A 172 TAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG-AQSLAAIIIEPIQGEGGFIVPAPGFLAT 250 (453)
T ss_dssp CCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC-GGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred cCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC-CCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence 3443 5666788999999999887 4 355555552 2378999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHH
Q psy6547 66 VRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPL 145 (266)
Q Consensus 66 l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (266)
|+++|++||++||+||+|++|++.|..++.+.+++.||+++|||++++| +|+||+++++++++.+....+..+++++++
T Consensus 251 l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~ 329 (453)
T 4ffc_A 251 LTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYAGGLGGTYGGNPV 329 (453)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHH
T ss_pred HHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcccCcCCCCCcCHH
Confidence 9999999999999999999999999877888889999999999999999 999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEee-----CccchHHHHHHHH
Q psy6547 146 ACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSV-----SAILEVYDVCIKM 219 (266)
Q Consensus 146 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~l 219 (266)
+++++.++|+.++.+++.++++++++++++.|++.... +.+.. +++.|. |+++.+.. .+.....++++.|
T Consensus 330 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~l 405 (453)
T 4ffc_A 330 TCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGE-VRGRGA---MLAIEIVKPGTLEPDAALTKSIAAEA 405 (453)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEE-EEEETT---EEEEEEBCTTSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-EEeece---EEEEEEecCcccCCCHHHHHHHHHHH
Confidence 99999999999888889999999999999999883333 33444 778899 99999853 1134577899999
Q ss_pred HHCCceeccCCC--CEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 220 KDAGLVTKPISN--NIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 220 ~~~gi~~~~~~~--~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
+++||++.+++. +++|+++++.++++++++++++|+++++++.++
T Consensus 406 ~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 406 LSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp HHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred HhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999998754 899999999999999999999999999887654
No 12
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=1.4e-36 Score=269.58 Aligned_cols=252 Identities=31% Similarity=0.568 Sum_probs=216.5
Q ss_pred cCCc-CcccccCCCCCCceeecCC------------------CHHHHHHHHhc--C-CCEEEEEEccccCCCCcccCChH
Q psy6547 4 TTDP-TSYNEFGPHMPGYNIIPYN------------------DVDALEAKLKS--N-PNICAFMVEPIQGEAGAVVPDDG 61 (266)
Q Consensus 4 ~~~~-~~~~~~~~~~~~v~~~~~~------------------d~~~l~~~l~~--~-~~~~~i~~~~~~~~~g~~~~~~~ 61 (266)
++++ .....|.|+..++..++++ +++.+++.+++ + +++++|++||+++++|.+.++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~ 248 (451)
T 3oks_A 169 TAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADG 248 (451)
T ss_dssp CCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTT
T ss_pred cCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHH
Confidence 3443 5667789999999999987 24444455543 2 37999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCC
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYG 141 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
++++|+++|++||++||+||+|++|++.|..++.+.+++.||++++||++++| +|+||+++++++++.+....+..+++
T Consensus 249 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~~~~~~t~~ 327 (451)
T 3oks_A 249 FLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHVSGLGGTYG 327 (451)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCTTSBCCSSS
T ss_pred HHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcCCCcCCCCC
Confidence 99999999999999999999999999999888888889999999999999999 99999999999999998878999999
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEee-----CccchHHHH
Q psy6547 142 GNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSV-----SAILEVYDV 215 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~ 215 (266)
+++++++++.++|+.++.+++.++++++++++++.|++.... +.+.. +++.|. |+++.+.. .+..+..++
T Consensus 328 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~G~---~~~~~~~~~~~~~~~~~~~~~~ 403 (451)
T 3oks_A 328 GNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGD-VRGRGA---MIAMELVKAGTTEPDADLTKAL 403 (451)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETT---EEEEEEBSTTSCCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-EEEeeE---EEEEEEecCccCCCCHHHHHHH
Confidence 999999999999999888889999999999999999983333 33444 788899 99999843 113457789
Q ss_pred HHHHHHCCceeccCCC--CEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 216 CIKMKDAGLVTKPISN--NIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 216 ~~~l~~~gi~~~~~~~--~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++.|+++||++.+++. +++|+++++.+|++++++++++|++++++
T Consensus 404 ~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 404 CAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999998654 89999999999999999999999998864
No 13
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=5.4e-37 Score=272.80 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=216.3
Q ss_pred ccCCcCcccccCCCCCCceeecCCC-----------------HHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHH
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPYND-----------------VDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYL 63 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~d-----------------~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l 63 (266)
+++.+..+..|.|...++..++.+. +++|++++++. +++++|++||+++++|.+.++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l 242 (459)
T 4a6r_A 163 LGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYW 242 (459)
T ss_dssp HSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHH
T ss_pred hcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHH
Confidence 4556666677888888998888543 78999999641 3789999999999999998999999
Q ss_pred HHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccC---CCCCCCCC
Q psy6547 64 KKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLV---PGTHGSTY 140 (266)
Q Consensus 64 ~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~---~~~~~~~~ 140 (266)
++|+++|++||+++|+||+|+||++.|..++.+.+++.||++++||++++|++|+|++++++++++.+. ...+..++
T Consensus 243 ~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 243 PEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCC
Confidence 999999999999999999999999999877778889999999999999976479999999999988876 55677899
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHh-hccccc-CCCcccEEecCccceeeEEEEeeCc---------
Q psy6547 141 GGNPLACKLAMTALDVILEENMIENAY-KMGEIFRSEL-SSPANK-SKASFKLSSGGLKKSINTLILSVSA--------- 208 (266)
Q Consensus 141 ~~~~~~~~a~~~~l~~~~~~~~~~~~~-~~~~~l~~~l-~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~--------- 208 (266)
++++++++++.++|+.++.+++.++++ ++.+++++.| +. +.. +.+.. .++.|+ |+++.+....
T Consensus 323 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~ 397 (459)
T 4a6r_A 323 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRET-FSRFEHVDD-VRGVGM---VQAFTLVKNKAKRELFPDF 397 (459)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHH-HTTCTTEEE-EEEETT---EEEEEECSBTTTTBCCSST
T ss_pred CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EEEEEE---EEEEEEecCccccccccch
Confidence 999999999999999988888999999 9999999999 55 543 33444 788999 9999987521
Q ss_pred cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 209 ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 209 ~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.....++++.|+++||++++.+ +++|++|++.+|++++++++++|+++++++..
T Consensus 398 ~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 398 GEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp THHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1126789999999999999985 99999999999999999999999999887643
No 14
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=1.3e-36 Score=267.53 Aligned_cols=245 Identities=33% Similarity=0.573 Sum_probs=210.4
Q ss_pred ccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 10 YNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 10 ~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
...|.|+..+++.++++|+++|+++++ +++++|+++|+++++|.+.++.+++++|+++|++||+++|+||+|+||++.
T Consensus 173 ~~~~~p~~~~~~~~~~~d~~~le~~i~--~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~ 250 (420)
T 2pb2_A 173 SDGFGPKPADIIHVPFNDLHAVKAVMD--DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRT 250 (420)
T ss_dssp HTTSSSCCSCEEEECTTCHHHHHHHCC--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred cccCCCCCCCeEEecCCCHHHHHHHhc--cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccC
Confidence 345678888999999999999999994 579999999999888877799999999999999999999999999999888
Q ss_pred CcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy6547 90 GKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKM 169 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 169 (266)
|..++++.+++.+|++++||++++| +|+|++++++++++.+....+..++++++++++++.++|+.++.+++.++++++
T Consensus 251 g~~~~~~~~~~~~diit~sK~l~~G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~ 329 (420)
T 2pb2_A 251 GDLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTK 329 (420)
T ss_dssp SSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHH
T ss_pred CcHHHHHhcCCCCCeEEecccccCC-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 8766666678889999999999999 899999999998888876667888999999999999999988777899999999
Q ss_pred HHHHHHHhhcccc--cCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHH
Q psy6547 170 GEIFRSELSSPAN--KSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQEL 247 (266)
Q Consensus 170 ~~~l~~~l~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i 247 (266)
++++++.|++ +. .+.+.. .++.|. ++++.++.....+..++++.|+++||.+.+++.+++|+++++.++++++
T Consensus 330 ~~~l~~~L~~-~~~~~~~~~~-~~~~g~---~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~~iRl~~~~~~t~eei 404 (420)
T 2pb2_A 330 RQQFVQHLQA-IDEQFDIFSD-IRGMGL---LIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI 404 (420)
T ss_dssp HHHHHHHHHH-HHHHHCCEEE-EEEETT---EEEEEECGGGTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHH
T ss_pred HHHHHHHHHH-HHhcCCCeEE-EEecce---EEEEEECCCchHHHHHHHHHHHHCCCEEEeCCCCEEEEECCCCCCHHHH
Confidence 9999999988 42 233333 567788 9999887521125788999999999999998789999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy6547 248 REGLDIIINTINTMA 262 (266)
Q Consensus 248 ~~~~~~l~~~~~~~~ 262 (266)
++++++|+++++++.
T Consensus 405 ~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 405 HEGMQRFAQAVGKVV 419 (420)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988753
No 15
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=8.5e-36 Score=264.55 Aligned_cols=253 Identities=28% Similarity=0.492 Sum_probs=214.5
Q ss_pred ccCCcCcccccCCCCCCceeecC--------CC---------HHHHHHHHh-cC-CCEEEEEEccc-cCCCCcccCChHH
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPY--------ND---------VDALEAKLK-SN-PNICAFMVEPI-QGEAGAVVPDDGY 62 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~--------~d---------~~~l~~~l~-~~-~~~~~i~~~~~-~~~~g~~~~~~~~ 62 (266)
+++.+.....|.|..+++..++. +| +++|+++++ .+ +++++|++||+ +| +|.+.+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~ 237 (452)
T 3n5m_A 159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDY 237 (452)
T ss_dssp SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTH
T ss_pred cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHH
Confidence 44555566678888888887775 44 899999996 22 37999999999 89 9988789999
Q ss_pred HHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCC------CCC
Q psy6547 63 LKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP------GTH 136 (266)
Q Consensus 63 l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~------~~~ 136 (266)
+++|+++|++||+++|+||+|+||+++|..++.+.+++.||++++||++++|++|+|++++++++++.+.. ..+
T Consensus 238 l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~ 317 (452)
T 3n5m_A 238 MKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRH 317 (452)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCC
T ss_pred HHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhhccCCCCccc
Confidence 99999999999999999999999999998888888999999999999999886899999999999988843 247
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCcc------
Q psy6547 137 GSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAI------ 209 (266)
Q Consensus 137 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~------ 209 (266)
..++++++++++++.++|+.++.+++.++++++.+++++.|++.+.. +.+.. .++.|. ++++.+.....
T Consensus 318 ~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~---~~~i~~~~~~~~~~~~~ 393 (452)
T 3n5m_A 318 INTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGD-IRGKGL---LVGIELVNDKETKEPID 393 (452)
T ss_dssp CCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE-EEESSS---CEEEEEEEETTTTEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEEEEE---EEEEEEecCCcccCCCC
Confidence 78999999999999999999888889999999999999999883333 33444 788899 99998854210
Q ss_pred -chHHHHHHHHHHCCceeccCC------CCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 210 -LEVYDVCIKMKDAGLVTKPIS------NNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 210 -~~~~~~~~~l~~~gi~~~~~~------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
....++++.|+++||++.+.+ .+++|++|++.+|++++++++++|++++++
T Consensus 394 ~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 394 NDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 124578999999999999875 589999999999999999999999998764
No 16
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=9.1e-36 Score=262.15 Aligned_cols=237 Identities=20% Similarity=0.321 Sum_probs=205.1
Q ss_pred CCCceeecCCCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccccc
Q psy6547 17 MPGYNIIPYNDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAI 95 (266)
Q Consensus 17 ~~~v~~~~~~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~ 95 (266)
..++..+||||++++++.++++. ++++|++||+++++|.+.++++++++|+++|++||+++|+||+++ ||+|..++.
T Consensus 196 ~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~~~a~ 273 (454)
T 4ao9_A 196 PFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAPHGLA 273 (454)
T ss_dssp CSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGSTTCHH
T ss_pred CCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCccccch
Confidence 34677899999999999998754 899999999999999999999999999999999999999999998 488998898
Q ss_pred ccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC----CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 96 HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 96 ~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
+.+|+.||+++++|+++|| +|+|++++++++++.+.+. .+.+||++||+++++++++|+.++++++.+++.++.+
T Consensus 274 e~~gv~PDi~t~gK~lggG-~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~ 352 (454)
T 4ao9_A 274 NKLGIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGE 352 (454)
T ss_dssp HHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred hccCCCCcEEEeccccCCC-CcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHH
Confidence 9999999999999999999 8999999999999988642 5789999999999999999999998999999999999
Q ss_pred HHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc-----------cchHHHHHHHHHHCCceeccCCCCEEEEeccC
Q psy6547 172 IFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA-----------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPAL 240 (266)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~ 240 (266)
+++++|++......+...+++.|. ++.+.+.+.+ ..-...+...|+++||++.|.+ . +.++.
T Consensus 353 ~l~~~L~~l~~~~~~~~~vrg~G~---m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~--~--~~~s~ 425 (454)
T 4ao9_A 353 ALRARLNALCANEGVAMQFTGIGS---LMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG--F--VVLSL 425 (454)
T ss_dssp HHHHHHHHHHHHHTBSCEEEEETT---EEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC--E--EECCT
T ss_pred HHHHHHHHHHhhCCCCEEEeeece---EEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC--C--EEEeC
Confidence 999999984444344444899999 9999875421 1123457788999999998863 3 34556
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 241 NITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 241 ~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.+|++|||+++++|++++.++..
T Consensus 426 ~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 426 PLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSGG
T ss_pred CCCHHHHHHHHHHHHHHHHhccc
Confidence 79999999999999999998654
No 17
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=1.2e-35 Score=262.44 Aligned_cols=247 Identities=29% Similarity=0.474 Sum_probs=209.9
Q ss_pred cccccCCCCCCceeecCC----------CHHHHHHHHh-c-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCE
Q psy6547 9 SYNEFGPHMPGYNIIPYN----------DVDALEAKLK-S-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVL 76 (266)
Q Consensus 9 ~~~~~~~~~~~v~~~~~~----------d~~~l~~~l~-~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~ 76 (266)
.+..|.|+..++..++++ |+++|+++++ . .+++++|+++|+++++|.+.++.+++++|+++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 237 (439)
T 3dxv_A 158 DAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGIL 237 (439)
T ss_dssp ------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred hccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 455677777778888887 6999999993 3 237899999999999999988999999999999999999
Q ss_pred EEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH
Q psy6547 77 FIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV 156 (266)
Q Consensus 77 li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 156 (266)
||+||+|++|++.|..+..+.+++.+|++++||++++| +|+||+++++++++.+....+..++ +++++++++.++++.
T Consensus 238 li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G-~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~ 315 (439)
T 3dxv_A 238 VVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLET 315 (439)
T ss_dssp EEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHH
T ss_pred EEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCC-cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHH
Confidence 99999999998888877778889999999999999999 8999999999999998877778889 999999999999998
Q ss_pred HhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeC------ccchHHHHHHHHHHCCceeccC
Q psy6547 157 ILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVS------AILEVYDVCIKMKDAGLVTKPI 229 (266)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~ 229 (266)
++.+++.++++++.+++++.|++.... ..+.. .++.|. ++++.+... +..+..++++.|+++||.+.++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 391 (439)
T 3dxv_A 316 IDRDDLPAMAERKGRLLRDGLSELAKRHPLIGD-IRGRGL---ACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYV 391 (439)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETT---EEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEEEE---EEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeec
Confidence 888889999999999999999883222 33333 678898 999988421 1345788999999999999987
Q ss_pred CC--CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 SN--NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ~~--~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+. +++|+++++.+|++++++++++|+++++++
T Consensus 392 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 392 GMNGNVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp STTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 54 899999999999999999999999999876
No 18
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=7.7e-35 Score=253.56 Aligned_cols=245 Identities=42% Similarity=0.793 Sum_probs=217.1
Q ss_pred ccCCcCcccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEV 82 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~ 82 (266)
++.++.....|.|...++..++++|+++|+++++ +++++|++++++|++|.+..+.+++++|+++|++||+++|+||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~ 224 (392)
T 3ruy_A 147 MSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAIT--PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEI 224 (392)
T ss_dssp TCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCC--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECT
T ss_pred ccCChhhccccCCCCCCCeeeCcccHHHHHHHhc--cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 3455666677888888999999999999999994 67999999999999999876777799999999999999999999
Q ss_pred ccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccH
Q psy6547 83 QTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENM 162 (266)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 162 (266)
|++|++.|..+..+.+++.+|++++||+++||++|+|++++++++.+.+....+..+++.++++++++.++++.++.+++
T Consensus 225 ~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 304 (392)
T 3ruy_A 225 QTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKL 304 (392)
T ss_dssp TTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred hhCCCccccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 99998888877777788899999999999988679999999999999888878888999999999999999998877889
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCC
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNI 242 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~ 242 (266)
.++++++++++++.|++ ++...+.. .++.|. ++++.++. +..++++.|.++||.+.+++.+++|++++..+
T Consensus 305 ~~~~~~~~~~l~~~L~~-~~~~~~~~-~~~~g~---~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~iRi~~~~~~ 375 (392)
T 3ruy_A 305 TERSLQLGEKLVGQLKE-IDNPMITE-VRGKGL---FIGIELNE----PARPYCEQLKAAGLLCKETHENVIRIAPPLVI 375 (392)
T ss_dssp HHHHHHHHHHHHHHHTT-CCCTTEEE-EEEETT---EEEEEESS----CSHHHHHHHHTTTEECCCBTTTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCceE-EEeeee---EEEEEEcc----hHHHHHHHHHHCCcEEecCCCCEEEEECCCCC
Confidence 99999999999999998 55444444 566788 99998764 56789999999999999998899999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q psy6547 243 TEQELREGLDIIINTI 258 (266)
Q Consensus 243 t~~~i~~~~~~l~~~~ 258 (266)
+++++++++++|++++
T Consensus 376 ~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 376 SEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999876
No 19
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=2e-35 Score=260.41 Aligned_cols=255 Identities=29% Similarity=0.492 Sum_probs=203.9
Q ss_pred cCCcCcccccCCCCC--CceeecCCC--------HHHHHHHHhcC--CCEEEEEEccccC-CCCcccCChHHHHHHHHHH
Q psy6547 4 TTDPTSYNEFGPHMP--GYNIIPYND--------VDALEAKLKSN--PNICAFMVEPIQG-EAGAVVPDDGYLKKVRALC 70 (266)
Q Consensus 4 ~~~~~~~~~~~~~~~--~v~~~~~~d--------~~~l~~~l~~~--~~~~~i~~~~~~~-~~g~~~~~~~~l~~l~~l~ 70 (266)
++.+.....+.|+.+ ++..+++++ +++|++++++. +++++|++||+++ ++|.+.++++++++|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~ 221 (430)
T 3i4j_A 142 SGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDIC 221 (430)
T ss_dssp --------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHH
T ss_pred cCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHH
Confidence 344444556777777 888999874 49999999641 4789999999999 9999889999999999999
Q ss_pred HhcCCEEEEeccccCcCCcCcccccccC-CCCcCeeeecccccCCchhhhhheecHHhhhccCC----CCCCCCCCCcHH
Q psy6547 71 SQYNVLFIADEVQTGLGRTGKLLAIHYE-DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP----GTHGSTYGGNPL 145 (266)
Q Consensus 71 ~~~g~~li~De~~~~~~~~g~~~~~~~~-~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~ 145 (266)
++||+++|+||+|++|++.|..++...+ ++.+|++++||++++|++|+||+++++++++.+.. ..+..+++++++
T Consensus 222 ~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~ 301 (430)
T 3i4j_A 222 DEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPV 301 (430)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHH
T ss_pred HHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHH
Confidence 9999999999999999998887788888 99999999999999887899999999999888764 257889999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc-------cchHHHHHH
Q psy6547 146 ACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA-------ILEVYDVCI 217 (266)
Q Consensus 146 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~ 217 (266)
+++++.++|+.++.+++.++++++.+++++.|++.... +.+.. .++.|. |+++.+.+.. ...+.++++
T Consensus 302 ~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (430)
T 3i4j_A 302 SVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQ-VRGTGL---LLGVVLGDLATGQAFETPGIASRIGA 377 (430)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETT---EEEEEEC------------CHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEEEE---EEEEEeccccccCCCccHHHHHHHHH
Confidence 99999999998888889999999999999999883322 34444 678899 9999886411 112467999
Q ss_pred HHHHCCceeccC-------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 218 KMKDAGLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 218 ~l~~~gi~~~~~-------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.|+++||+++++ +++++|+++++.++++++++++++|+++++++.
T Consensus 378 ~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 378 AALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp HHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999986 368999999999999999999999999998753
No 20
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.1e-34 Score=253.48 Aligned_cols=251 Identities=34% Similarity=0.583 Sum_probs=218.2
Q ss_pred CCcCcccccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 5 TDPTSYNEFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 5 ~~~~~~~~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
+.+.....|.|...++..++++|+++|+++++ +++++|+++|+++++|.+.++.+++++|+++|++||+++|+||+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 227 (406)
T 4adb_A 150 GQPAYSQDFAPLPADIRHAAYNDINSASALID--DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT 227 (406)
T ss_dssp SCGGGTGGGCSCCSSEEEECTTCHHHHHTTCS--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCccccccCCCCCCCceEeCCCcHHHHHHHhc--CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 44555666888889999999999999999993 5799999998777677665699999999999999999999999999
Q ss_pred CcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHH
Q psy6547 85 GLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIE 164 (266)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 164 (266)
+|++.|..+....+++.+|++++||++++| +|+||+++++++.+.+....+..++++++++++++.++++.++.+++.+
T Consensus 228 ~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 306 (406)
T 4adb_A 228 GVGRTGELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306 (406)
T ss_dssp TTTTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHH
T ss_pred CCCccchhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 998888877777778899999999999999 9999999999999999887788899999999999999999887778999
Q ss_pred HHHHHHHHHHHHhhccccc--CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCC
Q psy6547 165 NAYKMGEIFRSELSSPANK--SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNI 242 (266)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~ 242 (266)
+++++++++++.|++ +.. ..+.. .++.|. ++++.++.....+..++++.|.++||.+.+++.+++|++++..+
T Consensus 307 ~~~~~~~~l~~~l~~-~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRi~~~~~~ 381 (406)
T 4adb_A 307 GVKQRHDWFVERLNT-INHRYGLFSE-VRGLGL---LIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNV 381 (406)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCCEEE-EEEETT---EEEEEECTTTTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHH-HHHhCCCceE-EEEEEE---EEEEEEeCCcHHHHHHHHHHHHHCCcEEeecCCCeEEEECCCCC
Confidence 999999999999988 432 23333 567788 99999976212257899999999999999988899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhh
Q psy6547 243 TEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 243 t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+++++++++++|+++++++..
T Consensus 382 ~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 382 SEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988654
No 21
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-34 Score=256.07 Aligned_cols=240 Identities=25% Similarity=0.362 Sum_probs=206.7
Q ss_pred CCceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 18 PGYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 18 ~~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
.+++.+|++|+++|+++++++ +++++|++||+++++|.+.++++++++|+++|++||++||+||+|++| +.|..++.+
T Consensus 179 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~ 257 (434)
T 3l44_A 179 QEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQD 257 (434)
T ss_dssp TTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHH
T ss_pred CceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHH
Confidence 378899999999999999653 478999999999999999889999999999999999999999999999 888877777
Q ss_pred cCCCCcCeeeecccccCCchhhhhheecHHhhhccCC---CCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q psy6547 97 YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP---GTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIF 173 (266)
Q Consensus 97 ~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 173 (266)
.+++.||++++||++++| +|+|++++++++++.+.. ..+..++++++++++++.++++.++.+++.++++++++++
T Consensus 258 ~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l 336 (434)
T 3l44_A 258 LLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATL 336 (434)
T ss_dssp HHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred HcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 889999999999999999 999999999999988875 3477899999999999999999888888999999999999
Q ss_pred HHHhhcccccCCCcccEEecCccceeeEEEEeeCc-----------cchHHHHHHHHHHCCceeccCCCCEEEEeccCCC
Q psy6547 174 RSELSSPANKSKASFKLSSGGLKKSINTLILSVSA-----------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNI 242 (266)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~ 242 (266)
++.|++......+....++.|. ++++.+.... .....++++.|+++||.+++++.+.+|++ +.+
T Consensus 337 ~~~L~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~--~~~ 411 (434)
T 3l44_A 337 EKGILEQAAKHNIDITLNRLKG---ALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLT--TEH 411 (434)
T ss_dssp HHHHHHHHHHTTCCEEEEEETT---EEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECC--TTC
T ss_pred HHHHHHHHHhCCCCEEEEeecc---EEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEe--ccc
Confidence 9999883333233222778899 9999884311 22357789999999999999877888885 789
Q ss_pred CHHHHHHHHHHHHHHHHHHhhc
Q psy6547 243 TEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 243 t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
|++++++++++|+++++++...
T Consensus 412 t~e~i~~~l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 412 TKEDIEYTIEAVGRAFAALADN 433 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999886543
No 22
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.8e-34 Score=255.91 Aligned_cols=241 Identities=27% Similarity=0.409 Sum_probs=206.7
Q ss_pred cccccCCCCCCceeecCCC--HHH-------------HHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHh
Q psy6547 9 SYNEFGPHMPGYNIIPYND--VDA-------------LEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ 72 (266)
Q Consensus 9 ~~~~~~~~~~~v~~~~~~d--~~~-------------l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~ 72 (266)
....|.|+..+++.+|++| .+. |++++++ .+++++|++||++|++|.+.++++++++|+++|++
T Consensus 184 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 263 (449)
T 2cjg_A 184 ITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDE 263 (449)
T ss_dssp HHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHH
T ss_pred hcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHH
Confidence 3456778888999999988 443 8888864 25799999999999999878999999999999999
Q ss_pred cCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhcc-----CCCCCCCCCCCcHHHH
Q psy6547 73 YNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTL-----VPGTHGSTYGGNPLAC 147 (266)
Q Consensus 73 ~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 147 (266)
||+++|+||+|+||++.|..+.++.+++.+|++++||++ |+|++++++++.+.+ ....+..+++++++++
T Consensus 264 ~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~ 338 (449)
T 2cjg_A 264 FDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDM 338 (449)
T ss_dssp TTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHH
T ss_pred CCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHH
Confidence 999999999999999988876767778899999999998 689999999888763 2345678899999999
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccc--cCC-CcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCc
Q psy6547 148 KLAMTALDVILEENMIENAYKMGEIFRSELSSPAN--KSK-ASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGL 224 (266)
Q Consensus 148 ~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 224 (266)
+++.++|+.+.++++.+++++++++++++|++ +. .+. +.. .++.|. |+++.++. ..+..+++++|+++||
T Consensus 339 ~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~~-~~~~g~---~~~~~~~~--~~~~~~~~~~l~~~Gv 411 (449)
T 2cjg_A 339 VRARRILEVIEAEGLFERAVQHGKYLRARLDE-LAADFPAVVLD-PRGRGL---MCAFSLPT--TADRDELIRQLWQRAV 411 (449)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-HHHHSTTTSEE-EEEETT---EEEEECSS--HHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHhhCCCceee-EeeccE---EEEEEECC--hHHHHHHHHHHHHCCe
Confidence 99999999887788999999999999999998 53 233 444 678898 99998865 3357789999999999
Q ss_pred eeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 225 VTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 225 ~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++.+++.+++|+++++.+|++++++++++|+++++++
T Consensus 412 ~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 412 IVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999878999999999999999999999999998764
No 23
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=6.1e-34 Score=251.14 Aligned_cols=245 Identities=25% Similarity=0.421 Sum_probs=203.9
Q ss_pred cccCCCCCCceeecC--------C---------CHHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHHHHHHHHHH
Q psy6547 11 NEFGPHMPGYNIIPY--------N---------DVDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCS 71 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~--------~---------d~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~ 71 (266)
..|.|...++..++. + |+++|++++++. +++++|++||+++++|.+.++++++++|+++|+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~ 234 (433)
T 1zod_A 155 KGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCE 234 (433)
T ss_dssp SSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHH
T ss_pred cccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 345566667777653 2 389999999642 478999999998888987789999999999999
Q ss_pred hcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC--CCCCCCCCcHHHHHH
Q psy6547 72 QYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG--THGSTYGGNPLACKL 149 (266)
Q Consensus 72 ~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a 149 (266)
+||+++|+||+|++|++.|..+.++.+++.+|++++||++++| +|+||+++++++++.+... .+..+++++++++++
T Consensus 235 ~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 313 (433)
T 1zod_A 235 ARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAV 313 (433)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHH
T ss_pred HhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHH
Confidence 9999999999999998888766666678899999999999999 9999999999988777543 344788999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhcccc--cCCCcccEEecCccceeeEEEEeeCc------cchHHHHHHHHHH
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPAN--KSKASFKLSSGGLKKSINTLILSVSA------ILEVYDVCIKMKD 221 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~l~~ 221 (266)
+.++++.++++++.+++++++++++++|++ +. .+.+.. .++.|. |+++.++... ..+..++++.|++
T Consensus 314 ~~aal~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~-~~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 388 (433)
T 1zod_A 314 GLRVLDVVQRDGLVARANVMGDRLRRGLLD-LMERFDCIGD-VRGRGL---LLGVEIVKDRRTKEPADGLGAKITRECMN 388 (433)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HHHHCTTEEE-EEEETT---EEEEEEEEETTTTEECTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-HHHhCCCeEE-EEEEEE---EEEEEEecCccccCCChHHHHHHHHHHHH
Confidence 999999888888999999999999999988 43 233333 667888 9999886510 1247789999999
Q ss_pred CCceeccCC--C--CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 222 AGLVTKPIS--N--NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 222 ~gi~~~~~~--~--~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+||.+.++. + +++|+++++.++++++++++++|+++++++
T Consensus 389 ~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 389 LGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp TTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 999999864 2 899999999999999999999999998764
No 24
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=5.4e-34 Score=252.71 Aligned_cols=245 Identities=28% Similarity=0.521 Sum_probs=204.6
Q ss_pred cccCCCCCCceeecCC----------C--------HHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHHHHHHHHH
Q psy6547 11 NEFGPHMPGYNIIPYN----------D--------VDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALC 70 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~----------d--------~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~ 70 (266)
+.|.|...++..++.+ | +++|++++++. +++++|+++|+++++|.+.++++++++|+++|
T Consensus 170 ~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~ 249 (449)
T 3a8u_X 170 KLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREIC 249 (449)
T ss_dssp TTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred cccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHH
Confidence 3456666677766543 5 89999999642 47899999999888998888999999999999
Q ss_pred HhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---------CCCCCCC
Q psy6547 71 SQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---------THGSTYG 141 (266)
Q Consensus 71 ~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---------~~~~~~~ 141 (266)
++||+++|+||+|++|++.|..+..+.+++.+|++++||++++|++|+|++++++++++.+... .+..+++
T Consensus 250 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~ 329 (449)
T 3a8u_X 250 NQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYS 329 (449)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTT
T ss_pred HHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCc
Confidence 9999999999999999888876666777888999999999997757999999999888777543 3567888
Q ss_pred CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc-cc--hHHHHHH
Q psy6547 142 GNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA-IL--EVYDVCI 217 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-~~--~~~~~~~ 217 (266)
+++++++++.++|+.++.+++.+++++++++++++|++ ++. +.+.. .++.|. ++++.++... .. +..++++
T Consensus 330 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~-~~~~g~---~~~i~~~~~~~~~~~~~~~~~~ 404 (449)
T 3a8u_X 330 AHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG-IKGAKNVID-IRNFGL---AGAIQIAPRDGDAIVRPFEAGM 404 (449)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT-TTTSTTEEE-EEEETT---EEEEEECCBTTBSSHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EeeeEE---EEEEEEecCcccccccHHHHHH
Confidence 99999999999999888888999999999999999998 653 33333 567788 9999987521 11 3447999
Q ss_pred HHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 218 KMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 218 ~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.|.++||.+++++ +++|+++++.++++++++++++|+++++++
T Consensus 405 ~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 405 ALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp HHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999975 999999999999999999999999998764
No 25
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.6e-33 Score=247.58 Aligned_cols=236 Identities=34% Similarity=0.622 Sum_probs=195.6
Q ss_pred cccCCCCCCceeecCCC---------------------HHHHH-HHHhcC---CCEEEEEEccccCCCCcccCChHHHHH
Q psy6547 11 NEFGPHMPGYNIIPYND---------------------VDALE-AKLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKK 65 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~d---------------------~~~l~-~~l~~~---~~~~~i~~~~~~~~~g~~~~~~~~l~~ 65 (266)
..+.|...+++.+++++ +++|+ +++++. +++++|++||+++++|.+.++++++++
T Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~ 237 (419)
T 2eo5_A 158 SIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAE 237 (419)
T ss_dssp CSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred cccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHH
Confidence 35667777889988764 57888 888642 478999999998888987789999999
Q ss_pred HHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHH
Q psy6547 66 VRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPL 145 (266)
Q Consensus 66 l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (266)
|+++|++||+++|+||+|++|++.|..+..+..++.+|++++||++++|++|+||+++++++. .+ ...+..+++++++
T Consensus 238 l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 238 LQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 999999999999999999999888876666667889999999999998767999999999887 66 4467788999999
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCce
Q psy6547 146 ACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLV 225 (266)
Q Consensus 146 ~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 225 (266)
+++++.++|+.++. +.++++++++++.+.|++ + +.. .++.|+ |+++.+... ..... ++++|+++||.
T Consensus 316 ~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L~~-~----~~~-~~~~g~---~~~i~~~~~-~~~~~-~~~~l~~~Gv~ 382 (419)
T 2eo5_A 316 ACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQG-L----ADD-VRGIGL---AWGLEYNEK-KVRDR-IIGESFKRGLL 382 (419)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTT-S----SSE-EEEETT---EEEEECSCH-HHHHH-HHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH-h----hhh-eEeeeE---EEEEEEecC-ccHHH-HHHHHHHCCCE
Confidence 99999999987654 889999999999999988 4 333 677888 999988320 22356 99999999999
Q ss_pred eccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 226 TKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 226 ~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+++++.+++|+++++.+|++++++++++|+++++++
T Consensus 383 v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 383 LLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp CEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999877899999999999999999999999988653
No 26
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=5.6e-33 Score=244.23 Aligned_cols=244 Identities=29% Similarity=0.559 Sum_probs=205.2
Q ss_pred ccCCCCCCceeecCC----------CHHHHHHHHhcC---CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 12 EFGPHMPGYNIIPYN----------DVDALEAKLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~----------d~~~l~~~l~~~---~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
.|.|...+++.++.+ |+++|++++++. +++++|+++|+++++|.+.++.+++++|+++|++||++||
T Consensus 158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li 237 (426)
T 1sff_A 158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLI 237 (426)
T ss_dssp TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 455555668777753 689999999641 4789999999877788777999999999999999999999
Q ss_pred EeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q psy6547 79 ADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL 158 (266)
Q Consensus 79 ~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 158 (266)
+||+|++|++.|..+.++..++.+|++++||++++| +|+||+++++++++.+....+..+++.++++++++.++|+.++
T Consensus 238 ~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~ 316 (426)
T 1sff_A 238 ADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE 316 (426)
T ss_dssp EECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH
T ss_pred EechhhccCcccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH
Confidence 999999998877766666778889999999999999 9999999999998888766677888899999999999999888
Q ss_pred hccHHHHHHHHHHHHHHHhhcccc--cCCCcccEEecCccceeeEEEEee------CccchHHHHHHHHHHCCceeccCC
Q psy6547 159 EENMIENAYKMGEIFRSELSSPAN--KSKASFKLSSGGLKKSINTLILSV------SAILEVYDVCIKMKDAGLVTKPIS 230 (266)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~~~ 230 (266)
.+++.+++++++++++++|++ +. .+.+.. .++.|. ++++.+.. ..+.+..+++++|.++||.+.++.
T Consensus 317 ~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~ 391 (426)
T 1sff_A 317 QENLLQKANDLGQKLKDGLLA-IAEKHPEIGD-VRGLGA---MIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCG 391 (426)
T ss_dssp HTTHHHHHHHHHHHHHHHHHH-HHHTCTTEEE-EEEETT---EEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEES
T ss_pred hcCHHHHHHHHHHHHHHHHHH-HHHhCCCeEE-EEEEEE---EEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCC
Confidence 788999999999999999988 54 222333 456688 99999853 113457889999999999999875
Q ss_pred --CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 231 --NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 231 --~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.+++|+++++.++++++++++++|+++++++
T Consensus 392 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 392 PYYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 6899999998999999999999999998764
No 27
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=1.6e-33 Score=248.29 Aligned_cols=238 Identities=23% Similarity=0.384 Sum_probs=202.9
Q ss_pred CCCCceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccc
Q psy6547 16 HMPGYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA 94 (266)
Q Consensus 16 ~~~~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~ 94 (266)
...++..++++|+++|+++++++ +++++|+++|+++++|.+..+.+++++|+++|++||+++|+||+|+|| +.|..+.
T Consensus 175 ~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~ 253 (429)
T 4e77_A 175 FAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGA 253 (429)
T ss_dssp GGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCH
T ss_pred cCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchH
Confidence 34567889999999999999764 479999999999999999888999999999999999999999999999 8888777
Q ss_pred cccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 95 IHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 95 ~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
.+.+++.||++++||++++| +|+|++++++++++.+... .+..++++++++++++.++|+.++.+++.++++++++
T Consensus 254 ~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~ 332 (429)
T 4e77_A 254 QDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTD 332 (429)
T ss_dssp HHHTTCCCSEEEEEGGGGTT-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHH
T ss_pred HHhcCCCCCeeeecccccCC-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 88889999999999999999 8999999999999888753 4778899999999999999999877889999999999
Q ss_pred HHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc------------cchHHHHHHHHHHCCceeccCCCCEEEEecc
Q psy6547 172 IFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA------------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPA 239 (266)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~ 239 (266)
++++.|++......+....++.|. ++++.+.... .....++++.|+++||++.+++...+|+ +
T Consensus 333 ~l~~~L~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~ 407 (429)
T 4e77_A 333 SLATGLRHAAKEENIPLVVNHVGG---MFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAFEAGFM--S 407 (429)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEETT---EEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--C
T ss_pred HHHHHHHHHHHhCCCceEEEEeee---EEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCCCCEEE--e
Confidence 999999883333333333778899 9999987631 1234789999999999999987666665 4
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy6547 240 LNITEQELREGLDIIINTINT 260 (266)
Q Consensus 240 ~~~t~~~i~~~~~~l~~~~~~ 260 (266)
..+|++++++++++|++++++
T Consensus 408 ~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 408 LAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TTCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHHHHh
Confidence 889999999999999998754
No 28
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=3.8e-33 Score=245.81 Aligned_cols=242 Identities=29% Similarity=0.478 Sum_probs=202.6
Q ss_pred ccCCCCCCceeecC-----------CCHHHHHHHHhcC-CCEEEEEEccc-cCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 12 EFGPHMPGYNIIPY-----------NDVDALEAKLKSN-PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 12 ~~~~~~~~v~~~~~-----------~d~~~l~~~l~~~-~~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
.|.+...+++.++. .|+++|+++++++ +++++|+++|+ +|++|.+.++++++++|+++|++||+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li 243 (429)
T 1s0a_A 164 LWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLI 243 (429)
T ss_dssp GGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEE
T ss_pred cccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 45555556655543 4789999999642 47899999999 88899887899999999999999999999
Q ss_pred EeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC-----CCCCCCCCcHHHHHHHHHH
Q psy6547 79 ADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG-----THGSTYGGNPLACKLAMTA 153 (266)
Q Consensus 79 ~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~ 153 (266)
+||+|++|++.|..+..+..++.+|++++||++++|++|+|++++++++++.+... .+..++++|+++++++.++
T Consensus 244 ~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aa 323 (429)
T 1s0a_A 244 ADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323 (429)
T ss_dssp EECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHH
T ss_pred EeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHH
Confidence 99999999888876666667888999999999998757999999999888777543 2557888999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCC
Q psy6547 154 LDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNN 232 (266)
Q Consensus 154 l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 232 (266)
++.++++++.+++++++++++++|++ +.. +.+.. .++.|. ++++.++. ..+..++++.|+++||.+++. ++
T Consensus 324 l~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~-~~~~g~---~~~~~~~~--~~~~~~l~~~l~~~Gi~v~~~-~~ 395 (429)
T 1s0a_A 324 LAILESGDWQQQVADIEVQLREQLAP-ARDAEMVAD-VRVLGA---IGVVETTH--PVNMAALQKFFVEQGVWIRPF-GK 395 (429)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHGG-GGGCTTEEE-EEEETT---EEEEEESS--CBCHHHHHHHHHHTTEECCCB-TT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHH-HhcCCCEEE-EEEeeE---EEEEEECC--cccHHHHHHHHHHCCCEEecc-CC
Confidence 99888778899999999999999998 532 33333 566788 99998875 356788999999999999987 48
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++|+++++.+|++++++++++|+++++++
T Consensus 396 ~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 396 LIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987654
No 29
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=2.6e-33 Score=244.37 Aligned_cols=238 Identities=33% Similarity=0.629 Sum_probs=203.6
Q ss_pred ccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 12 EFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
.|.|...+++.++++|+++|++.++ +++++|++++++|++|.+.++.+++++|+++|++||+++|+||+|+++++.|.
T Consensus 157 ~~~p~~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~ 234 (397)
T 2ord_A 157 PFEPLVPGFEYFEFNNVEDLRRKMS--EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK 234 (397)
T ss_dssp GGCSCCTTEEEECTTCHHHHHHHCC--TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCeeEecCCCHHHHHHHhh--cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc
Confidence 4556667799999999999999994 57999999999999998569999999999999999999999999998877776
Q ss_pred ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
.+....++..+|++++||++++| +|+|++++++++. .+....+..+++.++++++++.++|+.++.+++.++++++++
T Consensus 235 ~~~~~~~~~~~d~~s~sK~~~~G-~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 312 (397)
T 2ord_A 235 LFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGN 312 (397)
T ss_dssp SSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHH
T ss_pred chhhhhhCCCCCeeeeccccCCC-cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 55555566779999999999999 8999999988877 666555677888999999999999998877779999999999
Q ss_pred HHHHHhhcccc--cCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHH
Q psy6547 172 IFRSELSSPAN--KSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELRE 249 (266)
Q Consensus 172 ~l~~~l~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~ 249 (266)
++++.|++ +. .+.+.. .++.|. ++++.++. ..+..+++++|.++||.+.+++.+++|+++++.++++++++
T Consensus 313 ~l~~~L~~-~~~~~~~~~~-~~~~g~---~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~~iRis~~~~~~~e~i~~ 385 (397)
T 2ord_A 313 YLMKKLQE-MKEEYDVVAD-VRGMGL---MIGIQFRE--EVSNREVATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDL 385 (397)
T ss_dssp HHHHHHHH-HHHHCTTEEE-EEEETT---EEEEEECT--TSCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHH-HHHhCCceEE-EEEEeE---EEEEEECC--hHHHHHHHHHHHHCCCEEccCCCCEEEEECCcCCCHHHHHH
Confidence 99999988 53 232222 456788 99998875 34578899999999999999878899999999999999999
Q ss_pred HHHHHHHHHHH
Q psy6547 250 GLDIIINTINT 260 (266)
Q Consensus 250 ~~~~l~~~~~~ 260 (266)
++++|++++++
T Consensus 386 ~~~~l~~~l~~ 396 (397)
T 2ord_A 386 AVETLKKVLQG 396 (397)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 30
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=1.6e-33 Score=248.38 Aligned_cols=235 Identities=23% Similarity=0.380 Sum_probs=202.1
Q ss_pred CCceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 18 PGYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 18 ~~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
.+++.++++|+++|+++++++ +++++|++||+++++|.+.++++++++|+++|++||+++|+||+|++| +.|..+..+
T Consensus 177 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~ 255 (429)
T 3k28_A 177 KNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQG 255 (429)
T ss_dssp TTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHH
T ss_pred CceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHH
Confidence 378889999999999999753 378999999999999999889999999999999999999999999999 888777777
Q ss_pred cCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q psy6547 97 YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIF 173 (266)
Q Consensus 97 ~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 173 (266)
.+++.||++++||++++| +|+|++++++++++.+... .+..++++++++++++.++++.++ +++.++++++++++
T Consensus 256 ~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l 333 (429)
T 3k28_A 256 YYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEML 333 (429)
T ss_dssp HHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHH
T ss_pred HhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 789999999999999999 9999999999999888643 367889999999999999998766 67899999999999
Q ss_pred HHHhhccccc-CCCcccEEecCccceeeEEEEeeCc-----------cchHHHHHHHHHHCCceeccCCCCEEEEeccCC
Q psy6547 174 RSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA-----------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALN 241 (266)
Q Consensus 174 ~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~ 241 (266)
++.|++.... ..+.. .++.|. ++++.+.... .....++++.|+++||.+++++.+.+|++ +.
T Consensus 334 ~~~L~~~~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~ 407 (429)
T 3k28_A 334 EAGLRKAAEKHGIPHH-INRAGS---MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLS--TV 407 (429)
T ss_dssp HHHHHHHHHHTTCCCE-EEEETT---EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCC--TT
T ss_pred HHHHHHHHhhCCCCEE-EEeecc---EEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEE--CC
Confidence 9999883333 33334 788899 9999875311 22357899999999999999877888886 78
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~~ 261 (266)
+|++++++++++|+++++++
T Consensus 408 ~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 408 HSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 31
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=1e-32 Score=242.96 Aligned_cols=235 Identities=24% Similarity=0.376 Sum_probs=201.5
Q ss_pred CceeecCCCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccccccc
Q psy6547 19 GYNIIPYNDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 97 (266)
Q Consensus 19 ~v~~~~~~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~ 97 (266)
+++.++++|+++|++++++++ ++++|+++|+++++|.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.
T Consensus 177 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~ 255 (427)
T 3fq8_A 177 NTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEK 255 (427)
T ss_dssp TEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHH
T ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHh
Confidence 478899999999999997643 79999999999999999889999999999999999999999999999 8887777778
Q ss_pred CCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q psy6547 98 EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 174 (266)
Q Consensus 98 ~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~ 174 (266)
+++.||+.++||++++| +|+|++++++++++.+... .+..++++++++++++.++++.++.+++.+++++++++++
T Consensus 256 ~~~~~di~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~ 334 (427)
T 3fq8_A 256 FGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLS 334 (427)
T ss_dssp TTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred cCCCCChhhhhhhhhCC-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 89999999999999999 8999999999999888753 4778889999999999999998888889999999999999
Q ss_pred HHhhcccccCCCcccEEecCccceeeEEEEeeCc-----------cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCC
Q psy6547 175 SELSSPANKSKASFKLSSGGLKKSINTLILSVSA-----------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNIT 243 (266)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t 243 (266)
+.|++......+....++.|. ++++.+.... .....++++.|+++||.+++++.. |++++..+|
T Consensus 335 ~~l~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~--r~~~~~~~t 409 (427)
T 3fq8_A 335 DGLLAIAQETGHAACGGQVSG---MFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE--AGFTSLAHT 409 (427)
T ss_dssp HHHHHHHHHTTCCCEEEEETT---EEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTS--CEECCTTCC
T ss_pred HHHHHHHHhCCCCeEEEEeee---EEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCCC--CEEeeCcCC
Confidence 999983333333333678899 9999986421 112567999999999999998655 555668999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6547 244 EQELREGLDIIINTINT 260 (266)
Q Consensus 244 ~~~i~~~~~~l~~~~~~ 260 (266)
++++++++++|++++++
T Consensus 410 ~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 410 EEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998865
No 32
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=1.3e-32 Score=242.92 Aligned_cols=237 Identities=24% Similarity=0.396 Sum_probs=199.1
Q ss_pred CceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccccccc
Q psy6547 19 GYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 97 (266)
Q Consensus 19 ~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~ 97 (266)
+++.++++|+++|++++++. +++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+|| +.|..+..+.
T Consensus 181 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~ 259 (434)
T 2epj_A 181 LTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGY 259 (434)
T ss_dssp TEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHH
T ss_pred ceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHH
Confidence 57888999999999999653 378999999999989988778999999999999999999999999998 6676666677
Q ss_pred CCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q psy6547 98 EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 174 (266)
Q Consensus 98 ~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~ 174 (266)
+++.||++++||++++| +|+|++++++++++.+... .+..++++++++++++.++|+.++++++.+++++++++++
T Consensus 260 ~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~ 338 (434)
T 2epj_A 260 FNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALE 338 (434)
T ss_dssp HTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred hCCCCCeeeecchhcCC-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 78899999999999999 9999999999999888752 3567889999999999999999887889999999999999
Q ss_pred HHhhcccccCCCcccEEecCccceeeEEEEeeC-----------ccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCC
Q psy6547 175 SELSSPANKSKASFKLSSGGLKKSINTLILSVS-----------AILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNIT 243 (266)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t 243 (266)
+.|++......+....++.|. |+++.++.. +..+..+++++|+++||.+.+++...+| +++.+|
T Consensus 339 ~~L~~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t 413 (434)
T 2epj_A 339 EAASEVLDRTGLPYTINRVES---MMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNLEAVF--TGLPHQ 413 (434)
T ss_dssp HHHHHHHHHHTCCEEEEEETT---EEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEE--CCTTCS
T ss_pred HHHHHHHhhCCCcEEEEEeee---EEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCCCcEE--EeccCC
Confidence 999883211122222677888 999998641 0134678999999999999998655555 458899
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy6547 244 EQELREGLDIIINTINTMA 262 (266)
Q Consensus 244 ~~~i~~~~~~l~~~~~~~~ 262 (266)
++++++++++|+++++++.
T Consensus 414 ~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 414 GEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 33
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=4.2e-32 Score=236.52 Aligned_cols=234 Identities=30% Similarity=0.528 Sum_probs=200.3
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL 92 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~ 92 (266)
+.|...++..++++|+++|+++++ +++++|+++|+++++|.+..+.+++++|+++|++||+++|+||+|++|++.|..
T Consensus 160 ~~p~~~~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~ 237 (395)
T 1vef_A 160 FLPLVEPVEFIPYNDVEALKRAVD--EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKR 237 (395)
T ss_dssp GCSCSSCEEEECTTCHHHHHHHCC--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred cCCCCCCeeEeCCCcHHHHHHHhc--cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCch
Confidence 456666788889899999999994 478999999999889988778899999999999999999999999988777765
Q ss_pred cccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q psy6547 93 LAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI 172 (266)
Q Consensus 93 ~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 172 (266)
+..+..+..+|++++||++++| +|+|++++++++.+.+....+..++++++++++++.++++.+..+++.+++++++++
T Consensus 238 ~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 316 (395)
T 1vef_A 238 FAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPW 316 (395)
T ss_dssp STHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred hHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5555567789999999999999 999999999988888876556778889999999999999988777788999999999
Q ss_pred HHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccCCCCEEEEeccCCCCHHHHHHHH
Q psy6547 173 FRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPISNNIIRLSPALNITEQELREGL 251 (266)
Q Consensus 173 l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~ 251 (266)
+++.|++ ++.+.+.. .++.|. ++++.++. +..+++++|. ++||.+.+++.+++|++++..++++++++++
T Consensus 317 l~~~l~~-~~~~~~~~-~~~~g~---~~~~~~~~----~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~ 387 (395)
T 1vef_A 317 FMEKLRA-IPSPKIRE-VRGMGL---MVGLELKE----KAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVV 387 (395)
T ss_dssp HHHHHHT-SCCTTEEE-EEEETT---EEEEEESS----CSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHH-hhcCceEE-EEEEEE---EEEEEEcC----hHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHH
Confidence 9999988 54322222 456778 99998875 3678999999 9999999987899999999999999999999
Q ss_pred HHHHHHH
Q psy6547 252 DIIINTI 258 (266)
Q Consensus 252 ~~l~~~~ 258 (266)
++|++++
T Consensus 388 ~~l~~~l 394 (395)
T 1vef_A 388 EAVRAVL 394 (395)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 34
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=5.8e-34 Score=267.54 Aligned_cols=228 Identities=24% Similarity=0.394 Sum_probs=189.0
Q ss_pred HHHHHHHhc------CCCEEEEEEccc-cCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCC
Q psy6547 29 DALEAKLKS------NPNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 101 (266)
Q Consensus 29 ~~l~~~l~~------~~~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~ 101 (266)
++|++.|++ ..++++|++||+ ++.+|+++++++++++|+++|++||+++|+||+++|||++|..|+.+.+|+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 678888852 247999999997 9999999999999999999999999999999999999999999998899999
Q ss_pred cCeeeecccccCCchhhhhheecHHhhhccCCC------CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q psy6547 102 PDIVILGKALSGGLYPISAVLADDEVMGTLVPG------THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 175 (266)
Q Consensus 102 ~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~ 175 (266)
||++++||+++||++|+|++++++++++.+... .++.||+++|+++++++++|+.++++++.+++.++.+++++
T Consensus 657 PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~ 736 (831)
T 4a0g_A 657 PDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRE 736 (831)
T ss_dssp CSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCC
T ss_pred CcEEEEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999999867999999999999888653 48899999999999999999999887776666554444322
Q ss_pred ----Hhhcccc-cCCCcccEEecCccceeeEEEEeeCc------cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCH
Q psy6547 176 ----ELSSPAN-KSKASFKLSSGGLKKSINTLILSVSA------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITE 244 (266)
Q Consensus 176 ----~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~ 244 (266)
.+.+.+. .+.+.. +++.|+ |+.+++.... ...+.++++.|+++||+++|. ++.+|+++++.+|+
T Consensus 737 ~l~~~l~~~l~~~~~v~~-vrg~Gl---~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~-g~~lrl~pp~~~t~ 811 (831)
T 4a0g_A 737 LWDEELVQQISSHSAVQR-VVVIGT---LFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL-GNVIYLMCGPCTSP 811 (831)
T ss_dssp CSCHHHHHHHHHSTTEEE-EEEETT---EEEEEEC---------CHHHHHHHHHHHHTTEECCCB-TTEEEEECCTTCCH
T ss_pred HHHHHHHHHHhhCCCcee-Eeeccc---EEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec-CCEEEEECCCCCCH
Confidence 1211122 234555 889999 9999986421 124667999999999999988 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6547 245 QELREGLDIIINTINTM 261 (266)
Q Consensus 245 ~~i~~~~~~l~~~~~~~ 261 (266)
++|++++++|.++++++
T Consensus 812 e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 812 EICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998754
No 35
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=7.4e-32 Score=237.29 Aligned_cols=232 Identities=26% Similarity=0.405 Sum_probs=194.3
Q ss_pred CCceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 18 PGYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 18 ~~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
.+++.++++|+++|++++++. +++++|++||+++++|.+.++++++++|+++ ++||++||+||+|+|| +.|..+..+
T Consensus 176 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~ 253 (424)
T 2e7u_A 176 KLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATE 253 (424)
T ss_dssp TTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHH
T ss_pred CceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHH
Confidence 367889999999999999642 4789999999998889887899999999999 9999999999999999 777666666
Q ss_pred cCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHH
Q psy6547 97 YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEI 172 (266)
Q Consensus 97 ~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~ 172 (266)
.+++.||++++||++++| +|+|++++++++++.+... .+..++++|+++++++.++|+.++. +++.+++++++++
T Consensus 254 ~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~ 332 (424)
T 2e7u_A 254 LLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGAR 332 (424)
T ss_dssp HHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred HhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 778899999999999999 9999999999999888752 3667889999999999999999887 8899999999999
Q ss_pred HHHHhhcccccCCCcccEEecCccceeeEEEEeeC-----------ccchHHHHHHHHHHCCceeccCCCCEEEEeccCC
Q psy6547 173 FRSELSSPANKSKASFKLSSGGLKKSINTLILSVS-----------AILEVYDVCIKMKDAGLVTKPISNNIIRLSPALN 241 (266)
Q Consensus 173 l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~ 241 (266)
++++|++......+....++.|. |+++.+... +..+..+++++|+++||++.+++...+|+ ++.
T Consensus 333 l~~~L~~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~ 407 (424)
T 2e7u_A 333 LEAGLKEVLKEKGLPHTVNRVGS---MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNFEAAFL--SVA 407 (424)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETT---EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEEC--CTT
T ss_pred HHHHHHHHHHhCCCceEEEeece---EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCCCceEe--ecc
Confidence 99999883222222222677888 999998641 02346789999999999999986555554 588
Q ss_pred CCHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINT 257 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~ 257 (266)
++++++++++++|+++
T Consensus 408 ~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 408 HREEDVEKTLEALRKA 423 (424)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999876
No 36
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3.5e-31 Score=228.99 Aligned_cols=229 Identities=33% Similarity=0.652 Sum_probs=196.1
Q ss_pred ccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 12 EFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
.+.|...++..++++|+++|+++++ +++++|+++|++|++|.+.++.+.+++|.++|++||+++|+||+|++|+..+.
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 223 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLD--EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE 223 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCC--TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhc--CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc
Confidence 4556667789999999999999994 47999999999999998877899999999999999999999999998877665
Q ss_pred ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
.+....++..+|++++||++++| +|+|++++++++.+.+....+..+++.+++.++++.++|+.+. ++.++++++++
T Consensus 224 ~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~ 300 (375)
T 2eh6_A 224 FYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGN 300 (375)
T ss_dssp SSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred chhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 44555667779999999999999 9999999999988888765567788889999999988888765 68889999999
Q ss_pred HHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHH
Q psy6547 172 IFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGL 251 (266)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~ 251 (266)
++.+.|++ ++. .. .++.|. ++++.++. +..+++++|.++||.+.+++.+++|++++..++++++++++
T Consensus 301 ~l~~~L~~-~~~---~~-~~~~g~---~~~~~~~~----~~~~~~~~l~~~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~ 368 (375)
T 2eh6_A 301 YFKEKLKE-LGK---GK-VKGRGL---MLGLELER----ECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAI 368 (375)
T ss_dssp HHHHHHHH-TTS---SE-EEEETT---EEEEECSS----CCHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHH-Hhc---CC-ceEEEE---EEEEEEcC----cHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHH
Confidence 99999987 543 22 556788 99998865 45789999999999999887899999999899999999999
Q ss_pred HHHHHH
Q psy6547 252 DIIINT 257 (266)
Q Consensus 252 ~~l~~~ 257 (266)
++|+++
T Consensus 369 ~~l~~~ 374 (375)
T 2eh6_A 369 SVLREI 374 (375)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
No 37
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=1e-31 Score=239.49 Aligned_cols=220 Identities=22% Similarity=0.330 Sum_probs=187.2
Q ss_pred CHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCC-
Q psy6547 27 DVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR- 101 (266)
Q Consensus 27 d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~- 101 (266)
|+++|+++++++ +++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+||++.|..++++.+++.
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 688999999641 169999999999999988899999999999999999999999999999988877777778876
Q ss_pred -cCeeeeccc-ccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhc
Q psy6547 102 -PDIVILGKA-LSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSS 179 (266)
Q Consensus 102 -~d~~~~sK~-~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 179 (266)
||+++|||+ ++|| ++ + ++++ ..+....+..|+++++++++++.++|+.+.++++.+++++++++++++|++
T Consensus 321 ~~Di~t~sK~~l~GG-~~----~-~~~~-~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 321 PADVMTFSKKMMTGG-FF----H-KEEF-RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp CCSEEEECGGGSSEE-EE----E-CGGG-SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccccccCC-cc----C-chhh-cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999 6777 43 2 5554 334455678899999999999999999988888999999999999999998
Q ss_pred ccc--cC-CCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 180 PAN--KS-KASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 180 ~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
+. .+ .+.. .++.|. |+++.+.+ ..+..+++++|+++||.+.+.+.+++|+++++.+|++++++++++|++
T Consensus 394 -l~~~~~~~v~~-~~~~g~---~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~ 466 (472)
T 1ohv_A 394 -LQARYPQFISR-VRGRGT---FCSFDTPD--ESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSD 466 (472)
T ss_dssp -HHHHCTTTCEE-EEEETT---EEEEECSS--HHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred -HHhhCCCcEEe-ecCCce---EEEEEeCC--hhHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 53 23 2444 677888 99988764 345778999999999999997778999999999999999999999999
Q ss_pred HHHH
Q psy6547 257 TINT 260 (266)
Q Consensus 257 ~~~~ 260 (266)
++++
T Consensus 467 ~l~~ 470 (472)
T 1ohv_A 467 ILAD 470 (472)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8865
No 38
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=1.1e-31 Score=238.12 Aligned_cols=234 Identities=22% Similarity=0.355 Sum_probs=191.6
Q ss_pred CCceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 18 PGYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 18 ~~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
.+++.++++|+++|+++++++ +++++|++||+++++|.+.++++++++|+++|++||++||+||+|+|| +.|..+..+
T Consensus 178 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~ 256 (453)
T 2cy8_A 178 ANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQA 256 (453)
T ss_dssp GGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHH
T ss_pred CceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhH
Confidence 357788899999999999653 478999999998888888788999999999999999999999999998 777666666
Q ss_pred cCCCCcCeeeecccccCCchhhhhheecHHhhhccCC-----CCCCCCCCCcHHHHHHHHHHHHH-HhhccHHHHHHHHH
Q psy6547 97 YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-----GTHGSTYGGNPLACKLAMTALDV-ILEENMIENAYKMG 170 (266)
Q Consensus 97 ~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~ 170 (266)
.+++.||++++||++++| +|+|++++++++++.+.. ..+..++++++++++++.++|+. + .+++.+++++++
T Consensus 257 ~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~ 334 (453)
T 2cy8_A 257 LLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLG 334 (453)
T ss_dssp HHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHH
T ss_pred HhCCCCcEEEEChhhhCC-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHH
Confidence 778899999999999999 899999999999988875 23567889999999999999998 7 778999999999
Q ss_pred HHHHHHhhcccc-cCCCcccEEecCccceeeEEEEee-----C------------ccchHHHHHHHHHHCCceeccCCCC
Q psy6547 171 EIFRSELSSPAN-KSKASFKLSSGGLKKSINTLILSV-----S------------AILEVYDVCIKMKDAGLVTKPISNN 232 (266)
Q Consensus 171 ~~l~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~-----~------------~~~~~~~~~~~l~~~gi~~~~~~~~ 232 (266)
++++++|++ +. ...+....++.|. ++++.++. . +..+..+++++|+++||++.+. +
T Consensus 335 ~~l~~~L~~-~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--~ 408 (453)
T 2cy8_A 335 QFAREAMNH-LFARKGLNWLAYGRFS---GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR--G 408 (453)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEECCTT---EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT--T
T ss_pred HHHHHHHHH-HHhhCCCcEEEEEeee---EEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC--C
Confidence 999999988 42 2222222667888 99999864 1 1223678999999999999764 3
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+|+ ++.++++++++++++|+++++++.
T Consensus 409 ~~~l--~~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 409 SVFL--SAQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp EEEC--CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEe--eccCCHHHHHHHHHHHHHHHHHHH
Confidence 3554 589999999999999999988764
No 39
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.95 E-value=4.1e-34 Score=253.09 Aligned_cols=234 Identities=24% Similarity=0.302 Sum_probs=199.0
Q ss_pred CceeecCCCHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccccccc
Q psy6547 19 GYNIIPYNDVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 97 (266)
Q Consensus 19 ~v~~~~~~d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~ 97 (266)
+++.++|+|+++|+++++++ +++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+ | +.|..++++.
T Consensus 211 ~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~ 288 (465)
T 2yky_A 211 HVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEM 288 (465)
Confidence 67788999999999999643 4799999999998899888889999999999999999999999999 6 8888778888
Q ss_pred CCCCcCeeeecccccCCchhhhhheecHHhhhccCC-----CCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q psy6547 98 EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-----GTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI 172 (266)
Q Consensus 98 ~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 172 (266)
+++.||+++|||++++| +|+||+++++++++.+.. ..+..|+++|+++++++.++|+.++++++.+++.+++++
T Consensus 289 ~gv~pDi~t~sK~lg~G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~ 367 (465)
T 2yky_A 289 LGISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDR 367 (465)
Confidence 89999999999999999 999999999999988876 357789999999999999999999888899999999999
Q ss_pred HHHHhhcccccCCCcccEEecCccceeeEEEEeeCc-----------cchHHHHHHHHHHCCceeccCCCCEEEEeccCC
Q psy6547 173 FRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA-----------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALN 241 (266)
Q Consensus 173 l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~ 241 (266)
++++|++......+...+++.|. |+++.+.+.. .....+++++|+++||++.|++... +++.
T Consensus 368 l~~~L~~~~~~~~~~~~v~g~G~---~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~----~s~~ 440 (465)
T 2yky_A 368 FRANLNRIAVENQAPLQFTGLGS---LGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA----LSLE 440 (465)
Confidence 99999983333233233778899 9999876410 1125678999999999999875332 6688
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q psy6547 242 ITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+|++++++++++|+++++++.
T Consensus 441 ~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 441 IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 999999999999999987753
No 40
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.95 E-value=1.6e-27 Score=211.23 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=184.9
Q ss_pred cCcccccCCCCCCceeecC----CCHHHHHHHHh----cCCCEEEEEEcc-ccCCCCcccCChHHHHHHHHHHHhcCCEE
Q psy6547 7 PTSYNEFGPHMPGYNIIPY----NDVDALEAKLK----SNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 7 ~~~~~~~~~~~~~v~~~~~----~d~~~l~~~l~----~~~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
+.....+...+.+++.++. .|+++|+++++ +.+++++|++.+ .+|++|.+ ++.+.+++|+++|++||++|
T Consensus 175 ~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~l 253 (448)
T 3aow_A 175 LAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIV 253 (448)
T ss_dssp HHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEE
Confidence 3333445567788888886 38999999996 323789987655 56777776 89999999999999999999
Q ss_pred EEeccccCcCCcCcc----cccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHH
Q psy6547 78 IADEVQTGLGRTGKL----LAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTA 153 (266)
Q Consensus 78 i~De~~~~~~~~g~~----~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 153 (266)
|+||+|+++...|.. ..++..+..+++.+|||++++| +|+||+++++++.+.+.......+++++++++.++..+
T Consensus 254 I~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~ 332 (448)
T 3aow_A 254 VEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRY 332 (448)
T ss_dssp EEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred EEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 999999887544432 2233334566778899999989 99999999999888876544455667789999988888
Q ss_pred HHHH--hh--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC
Q psy6547 154 LDVI--LE--ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI 229 (266)
Q Consensus 154 l~~~--~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 229 (266)
|+.. .. +.+.++++++++++.+.|++.++. .+....+..|+ |+|+.++. +.+..+++++|.++||.+.|+
T Consensus 333 L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-g~~~~~p~~g~---~~~v~~~~--~~~~~~l~~~l~~~gV~v~pg 406 (448)
T 3aow_A 333 VDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE-GVKWTKPEGGM---FIWVTLPD--GIDSKKMLERAIKKGVAYVPG 406 (448)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TCEECCCSBSS---EEEEECST--TCCHHHHHHHHHHTTEECEEG
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEeCCCccE---EEEEEcCC--CCCHHHHHHHHHHCCcEEEcc
Confidence 8642 11 345666667788888888762221 22221233577 89999876 557889999999999999874
Q ss_pred --------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 230 --------SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 230 --------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
..+++|++++. .+++++++++++|.+++++..
T Consensus 407 ~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 407 EAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp GGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 35799999775 389999999999999998754
No 41
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.95 E-value=2.9e-27 Score=204.45 Aligned_cols=236 Identities=17% Similarity=0.188 Sum_probs=182.1
Q ss_pred cCCCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 13 FGPHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 13 ~~~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
+...+.+++.++.+ |+++|++++ .+++++|++++++|++|.+ ++.+.+++|+++|++||+++|+||+|++
T Consensus 122 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~nptG~~-~~~~~l~~i~~la~~~~~~li~De~~~~ 198 (375)
T 3op7_A 122 PKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKMICINNANNPTGAV-MDRTYLEELVEIASEVGAYILSDEVYRS 198 (375)
T ss_dssp HHHTTCEEEEEEEEGGGTTEECHHHHHHHC--CTTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECCSCC
T ss_pred HHHcCCEEEEEeccccCCCCCCHHHHHHhh--ccCCeEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 34456777777754 899999999 3578899999888988876 7999999999999999999999999988
Q ss_pred cCCcCcccccccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh--ccH
Q psy6547 86 LGRTGKLLAIHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENM 162 (266)
Q Consensus 86 ~~~~g~~~~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~ 162 (266)
+...+.....+.++..+++.++||+++ +| +|+||+++++++.+.+.......+++++++.++++..+++..+. +..
T Consensus 199 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 277 (375)
T 3op7_A 199 FSELDVPSIIEVYDKGIAVNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERN 277 (375)
T ss_dssp CSSSCCCCHHHHCTTEEEEEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccCCCchhhhcCCEEEEeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHH
Confidence 755432223344566678888999998 88 99999999999999998877777888899999888888875432 345
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHH-HHCCceeccCC----CCEEEEe
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKM-KDAGLVTKPIS----NNIIRLS 237 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~----~~~iR~~ 237 (266)
.++++++.+.+.+.|++ .+ .+.......|. +.++.++. +.+..+++++| .++||.+.|+. .+++|++
T Consensus 278 ~~~~~~~~~~l~~~l~~-~~--~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 349 (375)
T 3op7_A 278 RHILEENLAILDQWIEE-EP--LVSYIRPAVVS---TSFVKIAV--DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLG 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHH-CT--TEEECCCSSSS---CEEEEECC--SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEC
T ss_pred HHHHHHHHHHHHHHHhh-CC--CceEecCCCeE---EEeEEcCC--CCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEE
Confidence 55567777777777766 32 22221223455 67777765 45678899888 58899998763 5899999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 238 PALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 238 ~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+ ..+++++++++++|.++++++.
T Consensus 350 ~--~~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 350 F--ACEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp C--CSCHHHHHHHHHHHHHHHGGGC
T ss_pred e--cCCHHHHHHHHHHHHHHHHHHh
Confidence 4 4567999999999999997754
No 42
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.94 E-value=2.3e-26 Score=200.89 Aligned_cols=240 Identities=18% Similarity=0.206 Sum_probs=181.6
Q ss_pred CCCCCCceeecCC----CHHHHHHHHh----cCCCEEEEE-EccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 14 GPHMPGYNIIPYN----DVDALEAKLK----SNPNICAFM-VEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 14 ~~~~~~v~~~~~~----d~~~l~~~l~----~~~~~~~i~-~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
...+.+++.++.+ |+++|+++++ +.+++++|+ ++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+
T Consensus 140 ~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~ 218 (407)
T 2zc0_A 140 EQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT-MSMERRKALLEIASKYDLLIIEDTAYN 218 (407)
T ss_dssp HTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 3456677777763 8999999996 433688876 45567778876 899999999999999999999999998
Q ss_pred CcCCcCcc-ccccc---CCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHH--h
Q psy6547 85 GLGRTGKL-LAIHY---EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI--L 158 (266)
Q Consensus 85 ~~~~~g~~-~~~~~---~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~ 158 (266)
++...|.. ..+.. .+..+++.++||++++| +|+||+++++++.+.+.......+++++++.+.++.++++.. +
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 297 (407)
T 2zc0_A 219 FMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFE 297 (407)
T ss_dssp TSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHH
T ss_pred ccccCCCCCCChhhcCCCCCEEEEcccccccCCC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCch
Confidence 87544432 12222 23345667799999999 999999999988887765555566777889998888888753 2
Q ss_pred ---hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccC-----
Q psy6547 159 ---EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPI----- 229 (266)
Q Consensus 159 ---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----- 229 (266)
-+...++++++++++.+.|++.++. +....+..|. ++|+.++. +.+..++++.|.++ ||.+.++
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~~~~~---~~~~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~~~~ 370 (407)
T 2zc0_A 298 KYHLEGALLGYKEKRDIMLKALENHLPN--AEFTKPIAGM---FVMFFLPE--GADGISFANELMEREGVVVVPGKPFYT 370 (407)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHHHCTT--SCBCCCSBSS---EEEEECST--TCCHHHHHHHHHHHTCEECBCSGGGCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--CEEecCCCcE---EEEEEcCC--CCCHHHHHHHHHHhCCeEEECchhccC
Confidence 2457778888888898888762222 2211234567 89998875 55788999999988 9999875
Q ss_pred ---CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 230 ---SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 230 ---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
..+++|++++.. +++++++++++|.++++++.+
T Consensus 371 ~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 371 DESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp SSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHhc
Confidence 357999998766 899999999999999987654
No 43
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=3.1e-27 Score=207.60 Aligned_cols=234 Identities=17% Similarity=0.189 Sum_probs=176.5
Q ss_pred CCCCCCceeecCC--------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 14 GPHMPGYNIIPYN--------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 14 ~~~~~~v~~~~~~--------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
...+.+++.+|.+ |+++|++++++ +++++|++++++|++|.+ ++++++++|+++|++||+++|+||+|++
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~~~vil~~p~nptG~~-~~~~~l~~l~~l~~~~~~~li~De~~~~ 238 (421)
T 3l8a_A 161 RLNDHRLVENSLQIINGRFEIDFEQLEKDIID-NNVKIYLLCSPHNPGGRV-WDNDDLIKIAELCKKHGVILVSDEIHQD 238 (421)
T ss_dssp HHTTEEEEEEECEEETTEEECCHHHHHHHHHH-TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHCCCEEEeccccccCCCeeeCHHHHHHHhhc-cCCeEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 3345667777753 89999999953 478999999999999955 8999999999999999999999999999
Q ss_pred cCCcCccc-ccc-----cCCCCcCeeeeccccc-CCchhhhhheec-HHhhhccCCCC-CCCCCCCcHHHHHHHHHHHHH
Q psy6547 86 LGRTGKLL-AIH-----YEDVRPDIVILGKALS-GGLYPISAVLAD-DEVMGTLVPGT-HGSTYGGNPLACKLAMTALDV 156 (266)
Q Consensus 86 ~~~~g~~~-~~~-----~~~~~~d~~~~sK~~~-~g~~~~g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~ 156 (266)
+.+.|..+ .+. ..+..+++.++||+++ +| +|+|+++++ +++.+.+.... ...++++++++++++.++++.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~ 317 (421)
T 3l8a_A 239 LALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY 317 (421)
T ss_dssp CBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred cccCCCCCccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 87766421 111 1244567888999998 88 999999988 78877776543 345568899999999998875
Q ss_pred Hhh--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccC----
Q psy6547 157 ILE--ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPI---- 229 (266)
Q Consensus 157 ~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~---- 229 (266)
.+. +++.++++++++++++.|++ . +.+.. ..+.|. -+.|+.++.. +.+..++++.|++ +||.+.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~L~~-~--~~i~~-~~~~~~--~~~~v~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~f~ 390 (421)
T 3l8a_A 318 GKPWLEELKTVIEGNIKLVIKELEA-K--TKIKV-MEPEGT--YLVWLDFSAY-AIAQPQLSEKLQNEAKVVLNDGAHFG 390 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH-H--CSCEE-ECCSBS--SEEEEECGGG-TCCTTHHHHHHHHTTCEECEEGGGGC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHh-C--CCceE-eCCCee--EEEEEecccc-CCCHHHHHHHHHHhCCEEEECchhhC
Confidence 322 45677778888888888877 4 33443 334444 0455777641 2356789999975 59999874
Q ss_pred --CCCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 230 --SNNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 230 --~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
+.+++|++++ ++++++++++++|+++++
T Consensus 391 ~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 391 KEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred CCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 3589999966 699999999999998864
No 44
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=4.6e-26 Score=200.57 Aligned_cols=233 Identities=13% Similarity=0.126 Sum_probs=182.6
Q ss_pred CCCCCceeecCCCHHHHHHHHhcCC--CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc--CCcC
Q psy6547 15 PHMPGYNIIPYNDVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRTG 90 (266)
Q Consensus 15 ~~~~~v~~~~~~d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~--~~~g 90 (266)
..+.+++.++++|+++|++++++.+ ++++|++++++|++|.+. ++++|+++|++||+++|+||+|+++ +..|
T Consensus 167 ~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~----~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g 242 (427)
T 2w8t_A 167 QGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIA----PLKEMVAVAKKHGAMVLVDEAHSMGFFGPNG 242 (427)
T ss_dssp HSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEEC----CHHHHHHHHHHTTCEEEEECTTTTTTSSTTS
T ss_pred HcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc----CHHHHHHHHHHcCCEEEEECCccccccCCCC
Confidence 3467889999999999999996532 689999999999999886 5999999999999999999999764 3233
Q ss_pred cccccccCCCCcC----eeeecccccCCchhhhhheecHHhhhccCCCC--CCCCCCCcHHHHHHHHHHHHHHhh-ccHH
Q psy6547 91 KLLAIHYEDVRPD----IVILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE-ENMI 163 (266)
Q Consensus 91 ~~~~~~~~~~~~d----~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 163 (266)
.. ....+++.++ +.++||+++ .+.||+++++++++.+.... ...+.+.+++.++++.++++.++. +++.
T Consensus 243 ~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~ 318 (427)
T 2w8t_A 243 RG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKR 318 (427)
T ss_dssp CC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHH
T ss_pred Cc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHH
Confidence 33 2223444333 677999996 34689999998888876541 223556788888888899998765 6789
Q ss_pred HHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-------CCEEE
Q psy6547 164 ENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------NNIIR 235 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~iR 235 (266)
++++++++++++.|++ ++..... .+ .|. ++++.+++ ..+..+++++|.++||.+.++. .+++|
T Consensus 319 ~~~~~~~~~l~~~L~~-~g~~~~~---~~~~~~---~~~~~~~~--~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lR 389 (427)
T 2w8t_A 319 ERLWSNARALHGGLKA-MGFRLGT---ETCDSA---IVAVMLED--QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLR 389 (427)
T ss_dssp HHHHHHHHHHHHHHHH-HTCEESC---SSCCSS---EEEEEESS--HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHH-cCCcccC---CCCCCC---EEEEEECC--HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEE
Confidence 9999999999999998 5321111 22 456 89999876 4567889999999999998652 36899
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 236 LSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
++++..++++++++++++|+++++++...
T Consensus 390 i~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 418 (427)
T 2w8t_A 390 CSICAEHTPAQIQTVLGMFQAAGRAVGVI 418 (427)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence 99999899999999999999999886543
No 45
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=1.2e-26 Score=204.26 Aligned_cols=221 Identities=19% Similarity=0.198 Sum_probs=170.0
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcc-cccc----cCCC
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIH----YEDV 100 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~-~~~~----~~~~ 100 (266)
.|+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++.+.|.. ..+. ..+.
T Consensus 170 ~d~~~l~~~l--~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 246 (429)
T 1yiz_A 170 LDNNELEALF--NEKTKMIIINTPHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246 (429)
T ss_dssp CCHHHHHHHC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGG
T ss_pred cCHHHHHHHh--ccCceEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCc
Confidence 4789999999 3578999988888888876 78999999999999999999999999887554431 1221 2345
Q ss_pred CcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH-----Hhh----ccHHHHHHHHH
Q psy6547 101 RPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV-----ILE----ENMIENAYKMG 170 (266)
Q Consensus 101 ~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~~~----~~~~~~~~~~~ 170 (266)
++++.++||.++ +| +|+||+++++++++.+.......+++.+++.++++.++|+. ... ++..+++++++
T Consensus 247 ~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 247 TITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR 325 (429)
T ss_dssp EEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred eEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHH
Confidence 667778999999 88 99999999999888776555566788899999999999987 311 23566677788
Q ss_pred HHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc----------cchHHHHHHHHH-HCCceeccCC---------
Q psy6547 171 EIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA----------ILEVYDVCIKMK-DAGLVTKPIS--------- 230 (266)
Q Consensus 171 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~l~-~~gi~~~~~~--------- 230 (266)
+++.+.|++ .+ +.......|. ++|+.++... ..+..+++++|. ++||.+.++.
T Consensus 326 ~~l~~~L~~-~g---~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~ 398 (429)
T 1yiz_A 326 DYMASFLAE-VG---MNPTVPQGGY---FMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKH 398 (429)
T ss_dssp HHHHHHHHH-HT---CEEEECSBSS---EEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGG
T ss_pred HHHHHHHHh-CC---CcccCCCcce---EEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccC
Confidence 888888877 42 2221223477 8999887520 035778999886 7999998741
Q ss_pred --CCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 231 --NNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 231 --~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
.+++|++++ .+++++++++++|+++++
T Consensus 399 ~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 399 LGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp GTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 579999976 599999999999998764
No 46
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=6.9e-27 Score=205.62 Aligned_cols=245 Identities=19% Similarity=0.258 Sum_probs=182.2
Q ss_pred cCCCCCCceeecC----CCHHHHHHHHhc------CCCEEEEE-EccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 13 FGPHMPGYNIIPY----NDVDALEAKLKS------NPNICAFM-VEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 13 ~~~~~~~v~~~~~----~d~~~l~~~l~~------~~~~~~i~-~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
+...+.+++.++. .|+++|++.+++ ..++++|+ +..++|++|.+ ++.+.+++|+++|++||+++|+||
T Consensus 150 ~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De 228 (425)
T 1vp4_A 150 FRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDD 228 (425)
T ss_dssp HHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEC
Confidence 3445667777776 389999999965 12688885 55667778876 899999999999999999999999
Q ss_pred cccCcCCcCcc-ccc---ccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHH
Q psy6547 82 VQTGLGRTGKL-LAI---HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 82 ~~~~~~~~g~~-~~~---~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
+|+++...|.. ..+ +..+....+.++||++++| +|+||+++++++.+.+.......+++.+++++.++..+|+..
T Consensus 229 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 307 (425)
T 1vp4_A 229 PYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERY 307 (425)
T ss_dssp SSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS
T ss_pred CCccccCCCCCCcCHHHhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC
Confidence 99887554432 122 2223344566799999988 999999999988887765444455667899999998888763
Q ss_pred --hh--ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC---
Q psy6547 158 --LE--ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI--- 229 (266)
Q Consensus 158 --~~--~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--- 229 (266)
.. +...++++++++++.+.|++.+.. +.+....+..|. ++|+.++. +.+..+++++|.++||.+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~---~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~f 382 (425)
T 1vp4_A 308 DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGL---FIWLTLPE--GFDTWEMFEYAKRKKVFYVPGRVF 382 (425)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSS---EEEEECCT--TCCTTTTHHHHHHHTEECEEGGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccE---EEEEEcCC--CCCHHHHHHHHHHCCCEEECchhh
Confidence 11 346677778888888888772221 023221234577 89999875 445678999999999999874
Q ss_pred -----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhcc
Q psy6547 230 -----SNNIIRLSPALNITEQELREGLDIIINTINTMAAKK 265 (266)
Q Consensus 230 -----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~~ 265 (266)
..+++|++++.. +++++++++++|.++++++.+++
T Consensus 383 ~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~~ 422 (425)
T 1vp4_A 383 KVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKEK 422 (425)
T ss_dssp CTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhhc
Confidence 357999998764 89999999999999998876554
No 47
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=2.6e-26 Score=199.72 Aligned_cols=234 Identities=18% Similarity=0.242 Sum_probs=184.3
Q ss_pred cccCCCCCCceeecCCCHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-C
Q psy6547 11 NEFGPHMPGYNIIPYNDVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-G 85 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~ 85 (266)
..+...+.+++.++++|+++|++++++. .++++|++++++|++|.+. ++++|.++|++||+++|+||+|. +
T Consensus 142 ~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~De~~~~~ 217 (399)
T 3tqx_A 142 DGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA----DLKSICDLADKYNALVMVDDSHAVG 217 (399)
T ss_dssp HHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC----CHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred HHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC----CHHHHHHHHHHcCCEEEEECCcccc
Confidence 3445567789999999999999999652 1689999999999999885 49999999999999999999993 4
Q ss_pred c-CCcCcccccccCCC--CcCee--eecccccCCchhhhhheecHHhhhccCCCCC--CCCCCCcHHHHHHHHHHHHHH-
Q psy6547 86 L-GRTGKLLAIHYEDV--RPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGTH--GSTYGGNPLACKLAMTALDVI- 157 (266)
Q Consensus 86 ~-~~~g~~~~~~~~~~--~~d~~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~- 157 (266)
+ +..+.. ....+++ .+|++ ++||+++ | .+.||+++++++++.+..... ..+.+.+++.++++.++++..
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~di~~~s~sK~~~-g-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (399)
T 3tqx_A 218 FIGENGRG-TPEYCGVADRVDILTGTLGKALG-G-ASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK 294 (399)
T ss_dssp TSSTTSCC-HHHHHTCTTCCSEEEEESSSSSC-S-SCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCc-hHHhhCCCCCCcEEEecchHhcc-c-CceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh
Confidence 3 333322 2333444 56777 6999998 6 678999999998887764211 224467888888999999877
Q ss_pred h-hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-------
Q psy6547 158 L-EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI------- 229 (266)
Q Consensus 158 ~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------- 229 (266)
+ .+++.++++++++++.+.|++ ++. .. ..+.|. ++++.++. ..+..+++++|.++||.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~-~g~---~~-~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~ 364 (399)
T 3tqx_A 295 TEGPQLRKQLQENSRYFRAGMEK-LGF---QL-VPGNHP---IIPVMLGD--AQLATNMADHLLQEGIYVVGFSYPVVPM 364 (399)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHH-HTC---CB-CCCSSS---EEEEEEEC--HHHHHHHHHHHHHTTEECCEECTTTSCT
T ss_pred hccHHHHHHHHHHHHHHHHHHHH-cCC---Cc-CCCCCC---EEEEEeCC--HHHHHHHHHHHHHCCCEEeeeCCCCCCC
Confidence 3 256889999999999999998 542 22 244567 99999887 557889999999999999853
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+.+++|++++..++++++++++++|+++++++
T Consensus 365 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 365 GKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 34699999998899999999999999998874
No 48
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.94 E-value=6.2e-26 Score=199.57 Aligned_cols=242 Identities=14% Similarity=0.103 Sum_probs=177.2
Q ss_pred cccCCCCCCceeecC----CCHHHHHHHHhcC----------CCEEEEEEcc-ccCCCCcccCChHHHHHHHHHHHhcCC
Q psy6547 11 NEFGPHMPGYNIIPY----NDVDALEAKLKSN----------PNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQYNV 75 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~----~d~~~l~~~l~~~----------~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~~~~g~ 75 (266)
..+...+.+++.++. .|+++|++++++. +++++|+++| ++|++|.+ ++.+.+++|+++|++||+
T Consensus 147 ~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 147 QSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNS-LTSERKKEIYELARKYDF 225 (425)
T ss_dssp HHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCC
Confidence 334455677777775 3799999999631 3578888865 57777876 899999999999999999
Q ss_pred EEEEeccccCcCCcCcc----cccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHH
Q psy6547 76 LFIADEVQTGLGRTGKL----LAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAM 151 (266)
Q Consensus 76 ~li~De~~~~~~~~g~~----~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 151 (266)
+||+||+|+++...|.. ..++..+..+.+.++||++++| +|+||+++++++++.+.......+++.+++++.++.
T Consensus 226 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp EEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHH
T ss_pred EEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999876444431 1222233445667799999999 999999999998887765555667788999999999
Q ss_pred HHHHHHhh-------ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHH-HHHHHHHCC
Q psy6547 152 TALDVILE-------ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYD-VCIKMKDAG 223 (266)
Q Consensus 152 ~~l~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g 223 (266)
.+|+.+.. +.+.++++++++.+.+.|++.+.. ......+..|+ ++|+.++. ..+..+ +.+.|.++|
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~p~~g~---~~~~~~~~--~~~~~~~~~~~l~~~g 378 (425)
T 2r2n_A 305 QLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTG-LAEWHVPAAGM---FLWIKVKG--INDVKELIEEKAVKMG 378 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-SEEECCCSBSS---EEEEEETT--CSCCHHHHHTHHHHTT
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CeEEeCCCceE---EEEEEeCC--CCCHHHHHHHHHHHCC
Confidence 88886432 234556666777777777652211 11111234677 89999875 334455 578888999
Q ss_pred ceeccC---------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 224 LVTKPI---------SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 224 i~~~~~---------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
|.+.|+ +.+++|++++. .+++++++++++|.+++++.
T Consensus 379 v~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 379 VLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred cEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence 999874 14799999763 59999999999999998763
No 49
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=5.8e-26 Score=198.67 Aligned_cols=228 Identities=17% Similarity=0.155 Sum_probs=178.7
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--cCCcC
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--LGRTG 90 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~--~~~~g 90 (266)
+...+.+++.++++|+++|+++++++ ++++|++++++|++|.+. ++++|+++|++||++||+||+|++ +++.|
T Consensus 160 ~~~~g~~~~~~~~~d~~~le~~l~~~-~~~~vi~~~~~nptG~~~----~l~~l~~la~~~~~~li~De~~~~g~~g~~g 234 (409)
T 3kki_A 160 ARYANAQAHPFMHNNCDHLRMLIQRH-GPGIIVVDSIYSTLGTIA----PLAELVNISKEFGCALLVDESHSLGTHGPNG 234 (409)
T ss_dssp HHHTTCEEEEECTTCHHHHHHHHHHH-CSCEEEEESBCTTTCCBC----CHHHHHHHHHHHTCEEEEECTTTTTTSSGGG
T ss_pred HHHcCCeEEEecCCCHHHHHHHHHhc-CCeEEEECCCCCCCCCcC----CHHHHHHHHHHcCCEEEEECCccccccCCCC
Confidence 34456788889999999999999653 368999999999999886 499999999999999999999977 66666
Q ss_pred cccccccCCC--CcCe--eeecccccCCchhhhhheecHHhhhccCCCCC--CCCCCCcHHHHHHHHHHHHHHhh-ccHH
Q psy6547 91 KLLAIHYEDV--RPDI--VILGKALSGGLYPISAVLADDEVMGTLVPGTH--GSTYGGNPLACKLAMTALDVILE-ENMI 163 (266)
Q Consensus 91 ~~~~~~~~~~--~~d~--~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 163 (266)
..+. ...++ .+|+ .++||++++| .|++++++++.+.+..... ..+...+++.++++.++++.++. +++.
T Consensus 235 ~~~~-~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~ 310 (409)
T 3kki_A 235 AGLL-AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRR 310 (409)
T ss_dssp CCHH-HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHH
T ss_pred Ccch-hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHH
Confidence 5433 22333 3455 6699999966 5889999888776653211 12223677888888899988766 4688
Q ss_pred HHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc-------CCCCEEEE
Q psy6547 164 ENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP-------ISNNIIRL 236 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-------~~~~~iR~ 236 (266)
++++++++++.+.|++ ++.. ..+.+. ++++.++. ..+..+++++|+++||.+.+ .+.+++|+
T Consensus 311 ~~~~~~~~~l~~~L~~-~g~~-----~~~~~~---~~~~~~~~--~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi 379 (409)
T 3kki_A 311 QHLDRMARKLRIGLSQ-LGLT-----IRSESQ---IIGLETGD--ERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRL 379 (409)
T ss_dssp HHHHHHHHHHHHHHHT-TTCC-----CCCSSS---EEEEEEES--HHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHH-cCCc-----cCCCCC---EEEEEeCC--HHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEE
Confidence 8999999999999998 5422 224566 89999877 45677899999999999854 34579999
Q ss_pred eccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 237 SPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 237 ~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+++..++++++++++++|+++++.
T Consensus 380 ~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 380 SLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999875
No 50
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.94 E-value=4.2e-26 Score=198.08 Aligned_cols=232 Identities=16% Similarity=0.121 Sum_probs=175.4
Q ss_pred CCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 16 HMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
.+.+++.++.+ |+++|++.++ ++++++++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++..
T Consensus 131 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 207 (389)
T 1gd9_A 131 AGGKPVEVPTYEEDEFRLNVDELKKYVT--DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIY 207 (389)
T ss_dssp HTCEEEEEECCGGGTTCCCHHHHHHHCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBC
T ss_pred CCCEEEEeccCCccCCCCCHHHHHHhcC--cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhccc
Confidence 45567777632 7899999994 468888888888888876 8999999999999999999999999988755
Q ss_pred cCc-ccccccC----CCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh---
Q psy6547 89 TGK-LLAIHYE----DVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--- 159 (266)
Q Consensus 89 ~g~-~~~~~~~----~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--- 159 (266)
.|. ...+..+ +.+..+.++||+++ +| +|+||+++++++.+.+.......+++.+++.+.++.++|+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 286 (389)
T 1gd9_A 208 DDARHYSIASLDGMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKA 286 (389)
T ss_dssp TTCCCCCGGGSTTCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCCCHhhccCCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchH
Confidence 443 2222222 22344566999998 88 89999999998888776555566778889999988888875332
Q ss_pred -ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC------CC
Q psy6547 160 -ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI------SN 231 (266)
Q Consensus 160 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~ 231 (266)
+++.++++++++++.+.|++ ++.... ....|. ++|+.++.. +.+..+++++|. ++||.+.++ +.
T Consensus 287 ~~~~~~~~~~~~~~l~~~L~~-~g~~~~---~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 358 (389)
T 1gd9_A 287 VEEMRKEYDRRRKLVWKRLNE-MGLPTV---KPKGAF---YIFPRIRDT-GLTSKKFSELMLKEARVAVVPGSAFGKAGE 358 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTCCCC---CCCBTT---EECCBCGGG-TCCHHHHHHHHHHHTCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCeec---CCCeee---EEEEeccCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 34667788888888888887 432222 223466 677777531 246788999998 899999875 25
Q ss_pred CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 232 NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 232 ~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+++|++++ .+++++++++++|.+++++.
T Consensus 359 ~~iRi~~~--~~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 359 GYVRISYA--TAYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp TBEEEECC--SCHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 79999966 49999999999999998763
No 51
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.93 E-value=7.9e-26 Score=199.25 Aligned_cols=236 Identities=12% Similarity=0.075 Sum_probs=179.7
Q ss_pred CCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 14 GPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 14 ~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
...+.+++.++.+ |+++|++++++ +++++|+++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++.
T Consensus 151 ~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~ 228 (437)
T 3g0t_A 151 RILGQKFESFDLFEYRGEKLREKLESYLQT-GQFCSIIYSNPNNPTWQC-MTDEELRIIGELATKHDVIVIEDLAYFGMD 228 (437)
T ss_dssp HHHTCCCEEEEGGGGCTTHHHHHHHHHHTT-TCCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCC
T ss_pred HHcCCEEEEEeecCCCCccCHHHHHHHHhc-CCceEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHCCcEEEEEcchhhcc
Confidence 3456778888764 78999999943 357777766668888876 899999999999999999999999998764
Q ss_pred CcCcc---------ccccc-CCCCcCeeeeccccc-CCchhhhhheecHHhhh-c-----------------cCCCCCCC
Q psy6547 88 RTGKL---------LAIHY-EDVRPDIVILGKALS-GGLYPISAVLADDEVMG-T-----------------LVPGTHGS 138 (266)
Q Consensus 88 ~~g~~---------~~~~~-~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~-~-----------------~~~~~~~~ 138 (266)
..+.. ..+.. .+....+.++||.++ +| +|+||+++++++.+ . +.......
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (437)
T 3g0t_A 229 FRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYAL 307 (437)
T ss_dssp TTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHH
T ss_pred cCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhh
Confidence 33221 12221 344455667999999 88 99999999999988 7 66544556
Q ss_pred CCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHhhcccccCCCc---ccEE-ecCccceeeEEEEeeCcc
Q psy6547 139 TYGGNPLACKLAMTALDVIL-----EENMIENAYKMGEIFRSELSSPANKSKAS---FKLS-SGGLKKSINTLILSVSAI 209 (266)
Q Consensus 139 ~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~-~~g~~~~~~~~~~~~~~~ 209 (266)
+++.+++++.++..+++... -++..++++++++++.+.|++ ++..... ...+ ..|. ++|+.++.
T Consensus 308 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~---~~~~~~~~--- 380 (437)
T 3g0t_A 308 SSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLD-NGFNIVYDKDGNEPLADGF---YFTVGYKG--- 380 (437)
T ss_dssp HSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHT-TTEEESSCEETTEECCSSS---EEEEEETT---
T ss_pred cCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCEEeccccCCCCCceeE---EEEEecCC---
Confidence 77889999999999998765 346788888999999999988 4321110 0013 4567 88888862
Q ss_pred chHHHHHHHHHHCCceeccCCC------CEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 210 LEVYDVCIKMKDAGLVTKPISN------NIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 210 ~~~~~~~~~l~~~gi~~~~~~~------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.+..+++++|.++||.+.++.. +++|++++.. +++++++++++|.+++++
T Consensus 381 ~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 381 MDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSS-CGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 4688999999999999987632 7899998844 999999999999998753
No 52
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.93 E-value=6.9e-27 Score=202.24 Aligned_cols=228 Identities=14% Similarity=0.158 Sum_probs=172.2
Q ss_pred CCCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 15 PHMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 15 ~~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
..+.+++.++. .|+++|++.++ +++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++...
T Consensus 130 ~~g~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 206 (376)
T 2dou_A 130 VASLRTFLIPLREDGLADLKAVPEGVW--REAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYE 206 (376)
T ss_dssp HTTCEEEEECBCTTSSBCGGGSCHHHH--HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS
T ss_pred HcCCEEEEeeCCCCCCCCHHHHHHhhc--cCceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccC
Confidence 34566777764 47889998884 368898888778888876 89999999999999999999999999887544
Q ss_pred Ccccc-ccc---CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--hccH
Q psy6547 90 GKLLA-IHY---EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENM 162 (266)
Q Consensus 90 g~~~~-~~~---~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~ 162 (266)
|.... ... .+..+.+.++||+++ +| +|+||+++++++.+.+.......+++.++++++++.++|+... -+..
T Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 285 (376)
T 2dou_A 207 GEAPSPLALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGY 285 (376)
T ss_dssp SCCCCGGGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCCCChhhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHH
Confidence 43211 222 234456677999998 88 9999999999988877654445566778889888888886421 1345
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC------CCCEEEE
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI------SNNIIRL 236 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------~~~~iR~ 236 (266)
.++++++++++.+.|++ . +.......|. ++|+.++. +.+..+++++|.++||.+.++ +.+++|+
T Consensus 286 ~~~~~~~~~~l~~~L~~-~----~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ri 355 (376)
T 2dou_A 286 ARVYRERALGMAEALKG-V----LSLLPPRATM---YLWGRLPE--GVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRI 355 (376)
T ss_dssp HHHHHHHHHHHHHHHTT-T----SEECCCCBSS---EEEEECCT--TCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHHHHH-h----cCccCCCeeE---EEEEECCC--CCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEE
Confidence 66777888888888877 3 2221123466 78888875 456788999999999999875 2579999
Q ss_pred eccCCCCHHHHHHHHHHHHHHH
Q psy6547 237 SPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 237 ~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+++ .+++++++++++|++++
T Consensus 356 s~~--~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 356 ALV--RPLEELLEAAKRIREAL 375 (376)
T ss_dssp ECC--SCHHHHHHHHHHHHHTC
T ss_pred Eec--CCHHHHHHHHHHHHHHh
Confidence 966 48999999999998764
No 53
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=2.3e-26 Score=200.37 Aligned_cols=240 Identities=18% Similarity=0.180 Sum_probs=176.7
Q ss_pred cCCCCCCceeecCC----CHHHHHHHHhcCCCEEEEE-EccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 13 FGPHMPGYNIIPYN----DVDALEAKLKSNPNICAFM-VEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 13 ~~~~~~~v~~~~~~----d~~~l~~~l~~~~~~~~i~-~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+...+.+++.++.+ |+++|++.+++. ++++|+ ++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++.
T Consensus 132 ~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 209 (397)
T 2zyj_A 132 FRLQGPRFLTVPAGEEGPDLDALEEVLKRE-RPRFLYLIPSFQNPTGGL-TPLPARKRLLQMVMERGLVVVEDDAYRELY 209 (397)
T ss_dssp HHTTCCEEEEEEEETTEECHHHHHHHHHHC-CCSCEEECCBSCTTTCCB-CCHHHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred HHHcCCEEEecCcCCCCCCHHHHHHHHhhc-CCeEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeCCccccc
Confidence 34456677777753 899999999643 467775 45567778876 899999999999999999999999998875
Q ss_pred CcCcc-cccccC------CCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--
Q psy6547 88 RTGKL-LAIHYE------DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-- 158 (266)
Q Consensus 88 ~~g~~-~~~~~~------~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-- 158 (266)
..|.. ..+..+ +....+.++||++++| +|+||+++++++.+.+.......+++.+++++.++..+|+...
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 288 (397)
T 2zyj_A 210 FGEARLPSLFELAREAGYPGVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSE 288 (397)
T ss_dssp CSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHH
T ss_pred CCCCCCCchhhhCcccCCCeEEEEeccccccccc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHH
Confidence 54542 222222 2234466799999988 9999999999888877654444456678888888888776421
Q ss_pred -hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC--------
Q psy6547 159 -EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI-------- 229 (266)
Q Consensus 159 -~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------- 229 (266)
-++..++++++++++.+.|++.++. .+....+..|. ++|+.++. +.+..+++++|.++||.+.++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~L~~~~~~-g~~~~~~~~g~---~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~f~~~~~ 362 (397)
T 2zyj_A 289 RLERVRRVYREKAQAMLHALDREVPK-EVRYTRPKGGM---FVWMELPK--GLSAEGLFRRALEENVAFVPGGPFFANGG 362 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCT-TSEECCCSBSS---EEEEECST--TCCHHHHHHHHHHTTEEEEESGGGCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC-CeEEccCCccE---EEEEEcCC--CCCHHHHHHHHHHCCCEEechHHhcCCCC
Confidence 1345566667777777777762211 12221224567 89998875 456889999999999999874
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
..+++|++++.. +++++++++++|.++++++.
T Consensus 363 ~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 363 GENTLRLSYATL-DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp CTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 357999998765 89999999999999988765
No 54
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.8e-26 Score=202.22 Aligned_cols=218 Identities=17% Similarity=0.236 Sum_probs=169.1
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccc---c--ccCCC
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA---I--HYEDV 100 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~---~--~~~~~ 100 (266)
.|+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++.+.|.... + ..++.
T Consensus 189 ~d~~~l~~~l--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 265 (447)
T 3b46_A 189 IDFEQFEKAI--TSKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQL 265 (447)
T ss_dssp ECHHHHHTTC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTT
T ss_pred cCHHHHHHhh--ccCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCc
Confidence 4789999998 3578999988888888876 8899999999999999999999999988755442212 1 12456
Q ss_pred CcCeeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Q psy6547 101 RPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMGEIFR 174 (266)
Q Consensus 101 ~~d~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~ 174 (266)
++.+.++||+++ +| +|+||+++ ++++++.+....+..+++.+++.+.++.++|+.... +++.++++++++++.
T Consensus 266 ~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~ 344 (447)
T 3b46_A 266 TLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT 344 (447)
T ss_dssp EEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence 777888999999 89 99999999 999888776544556778889999998888887532 346777888888888
Q ss_pred HHhhcccccCCCcccEEecCccceeeEEEEeeCc-------------cchHHHHHHHHH-HCCceeccCC----------
Q psy6547 175 SELSSPANKSKASFKLSSGGLKKSINTLILSVSA-------------ILEVYDVCIKMK-DAGLVTKPIS---------- 230 (266)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------~~~~~~~~~~l~-~~gi~~~~~~---------- 230 (266)
+.|++ ++. ....+..|. ++|+.++... ..+..+++++|. ++||.+.|+.
T Consensus 345 ~~L~~-~g~---~~~~~~~g~---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~ 417 (447)
T 3b46_A 345 SIFDE-LGL---PYTAPEGTY---FVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKA 417 (447)
T ss_dssp HHHHH-HTC---CEECCSBSS---EEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGG
T ss_pred HHHHH-CCC---eecCCCeeE---EEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCC
Confidence 88887 532 221234577 8888876410 135678999887 6899998752
Q ss_pred -CCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 231 -NNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 231 -~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
.+++|++++ .+++++++++++|++
T Consensus 418 ~~~~iRls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 418 AENLLRFAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp GTTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred CCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 689999965 589999999999986
No 55
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.93 E-value=1.4e-25 Score=192.28 Aligned_cols=230 Identities=16% Similarity=0.110 Sum_probs=177.4
Q ss_pred cccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 11 NEFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
..+...+.+++.++.+ |+++|++.+++++++++|++++++|++|.+ ++.+.+++|+++| +||+++|+||+|++
T Consensus 107 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~-~~~~~li~De~~~~ 184 (354)
T 3ly1_A 107 HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI-TPADVIEPWIASK-PANTMFIVDEAYAE 184 (354)
T ss_dssp HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC-CCHHHHHHHHHTC-CTTEEEEEECTTGG
T ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC-cCHHHHHHHHHhC-CCCeEEEEeccHHH
Confidence 3344567788999887 899999999643578999988888888877 7888888888888 79999999999988
Q ss_pred cCCcCcccc----cccC-CCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q psy6547 86 LGRTGKLLA----IHYE-DVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE 159 (266)
Q Consensus 86 ~~~~g~~~~----~~~~-~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 159 (266)
+...+.... .... +....+.++||+++ +| +|+||+++++++.+.+..... .++.+++++.++.++++..+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~ 261 (354)
T 3ly1_A 185 FVNDPRFRSISPMITQGAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVA--GEKINFSGVDAALASMNDSAF 261 (354)
T ss_dssp GCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTT--CSCCCHHHHHHHHHHTTCHHH
T ss_pred hccccccCCHHHHhhhcCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHH
Confidence 755443211 1222 44456667999998 88 999999999999888875333 378899999998888874321
Q ss_pred -ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec---cCCCCEEE
Q psy6547 160 -ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK---PISNNIIR 235 (266)
Q Consensus 160 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~---~~~~~~iR 235 (266)
++..++++++++++.+.|++ .+ +.. .++.|. ++++.++. +..++.+.|.++||.+. ....+++|
T Consensus 262 ~~~~~~~~~~~~~~l~~~l~~-~~---~~~-~~~~~~---~~~~~~~~----~~~~~~~~l~~~gi~v~g~~~~~~~~iR 329 (354)
T 3ly1_A 262 ITYSKKSNDVSRQILLKALED-LK---LPY-LPSEGN---FVFHQLVV----PLKDYQTHMADAGVLIGRAFPPADNWCR 329 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HT---CCB-CCCCSS---EEEEECSS----CHHHHHHHHHHTTEECCCCCTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CC---CeE-CCCCce---EEEEECCC----CHHHHHHHHHHCCEEEeecCCCCCCEEE
Confidence 45677788888888888887 43 232 334677 88888875 57889999999999988 12468999
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 236 LSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++++ +++++++++++|++++++
T Consensus 330 is~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 330 ISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp EECC---CHHHHHHHHHHHHHHHHT
T ss_pred EEcC---CHHHHHHHHHHHHHHHHh
Confidence 9943 899999999999998865
No 56
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.93 E-value=6.5e-26 Score=196.81 Aligned_cols=234 Identities=12% Similarity=0.112 Sum_probs=175.8
Q ss_pred CCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 15 PHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 15 ~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
..+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++.
T Consensus 133 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 209 (388)
T 1j32_A 133 LAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKIL 209 (388)
T ss_dssp HTTCEEEEECCCGGGTTCCCHHHHHHHC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred HcCCEEEEecCCcccCCCCCHHHHHHhc--CcCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 345677777753 789999999 3468999888888888877 789999999999999999999999998875
Q ss_pred CcCcc----ccccc--CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--
Q psy6547 88 RTGKL----LAIHY--EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-- 158 (266)
Q Consensus 88 ~~g~~----~~~~~--~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-- 158 (266)
..|.. ..+.. .+.++.+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++.++|+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 288 (388)
T 1j32_A 210 YDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDC 288 (388)
T ss_dssp CTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHH
T ss_pred cCCCCCCCHHHccccccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHH
Confidence 54431 11111 345667788999998 88 9999999999888777654455677788888888888886321
Q ss_pred hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccCC----CCE
Q psy6547 159 EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPIS----NNI 233 (266)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~----~~~ 233 (266)
-+++.++++++++++.+.|++ +. .+.......+. ++|+.++.. +.+..+++++|.+ +||.+.++. .++
T Consensus 289 ~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 361 (388)
T 1j32_A 289 VQEMLAAFAERRRYMLDALNA-MP--GLECPKPDGAF---YMFPSIAKT-GRSSLDFCSELLDQHQVATVPGAAFGADDC 361 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-CT--TCBCCCCCBTT---EECCBCGGG-TCCHHHHHHHHHHHHCEECEEGGGGTCTTB
T ss_pred HHHHHHHHHHHHHHHHHHHhh-CC--CCcccCCCeeE---EEEEecCCC-CCCHHHHHHHHHHhCCEEEeChhhhCCCCc
Confidence 134677788888899999887 52 22221122355 666666431 2367889999986 799998752 589
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+|++++ ++++++++++++|.++++++
T Consensus 362 iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 362 IRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp EEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 999965 79999999999999998764
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=7.8e-26 Score=196.27 Aligned_cols=231 Identities=13% Similarity=0.125 Sum_probs=174.3
Q ss_pred cCCCCCCceeecC------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 13 FGPHMPGYNIIPY------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 13 ~~~~~~~v~~~~~------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+...+.+++.++. .|+++|++.+ .++++++++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~d~~~l~~~l--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~ 208 (386)
T 1u08_A 132 IALSGGIVKRMALQPPHFRVDWQEFAALL--SERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHI 208 (386)
T ss_dssp HHHTTCEEEEEECCTTTCCCCHHHHHHHC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTC
T ss_pred HHHcCCEEEEeecCcccCcCCHHHHHHhh--cccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEcccccc
Confidence 3445667777775 3799999999 4578999988888888876 89999999999999999999999999887
Q ss_pred CCcCcc---c-ccc-cCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--
Q psy6547 87 GRTGKL---L-AIH-YEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-- 158 (266)
Q Consensus 87 ~~~g~~---~-~~~-~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-- 158 (266)
...|.. + .+. ..+.++.+.++||+++ +| +|+||+++++++.+.+.......+++.+++.+.++..+|+...
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 287 (386)
T 1u08_A 209 NFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEH 287 (386)
T ss_dssp BCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHH
T ss_pred ccCCCCCcChhcccCccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHH
Confidence 554431 1 121 2355667778999999 88 9999999999988877654444567788888888888887532
Q ss_pred hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC--------
Q psy6547 159 EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI-------- 229 (266)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~-------- 229 (266)
-+++.++++++++++.+.|++ .+ +.......|. ++|+.++.....+..+++++|. ++||.+.++
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 360 (386)
T 1u08_A 288 YLALPDFYRQKRDILVNALNE-SR---LEILPCEGTY---FLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPF 360 (386)
T ss_dssp HHTHHHHHHHHHHHHHHHTTS-SS---CEECCCCBSS---EEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CC---CeecCCCceE---EEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCC
Confidence 145778888888888888887 43 2221223467 8888886510136788999886 689999864
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
+.+++|++++ .+++++++++++|++
T Consensus 361 ~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 361 PHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp CSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred CCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 3578999965 589999999999864
No 58
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=3.3e-24 Score=185.59 Aligned_cols=231 Identities=13% Similarity=0.092 Sum_probs=176.8
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.+++++++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.+ ..
T Consensus 117 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~~~-~~- 190 (386)
T 2dr1_A 117 NGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLN----PLPELAKVAKEHDKLVFVDAVSAMG-GA- 190 (386)
T ss_dssp TTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEEC----CHHHHHHHHHHTTCEEEEECTTTBT-TB-
T ss_pred hCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhC----CHHHHHHHHHHcCCeEEEEcccccc-Cc-
Confidence 4566777775 58999999996555789999999999999885 6899999999999999999999633 21
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCC------------------CCCCCCCCcHHHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPG------------------THGSTYGGNPLACKLA 150 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~a~ 150 (266)
.+....+ .+|+++ +||+++++ .++|++++++++.+.+... ....+++.+++.++++
T Consensus 191 -~~~~~~~--~~di~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 266 (386)
T 2dr1_A 191 -DIKFDKW--GLDVVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGI 266 (386)
T ss_dssp -CCCTTTT--TCSEEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHH
T ss_pred -ccccccc--CCcEEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHH
Confidence 1223333 345555 66999976 5689999999888766421 1244567788889999
Q ss_pred HHHHHHHhhc----cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCcee
Q psy6547 151 MTALDVILEE----NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVT 226 (266)
Q Consensus 151 ~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 226 (266)
..+++.+... ++.++++++++++.+.|++ ++...........+. ++++.++. +.+..+++++|.++||.+
T Consensus 267 ~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~v 340 (386)
T 2dr1_A 267 NVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-IGLDILAEPGHESPT---ITAVLTPP--GIKGDEVYEAMRKRGFEL 340 (386)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSCTTCBCSS---EEEEECCT--TCCHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCeeCcCccccCCc---eEEEEcCC--CCCHHHHHHHHHHCCeEE
Confidence 9999887654 5788889999999999988 442222110011456 88998875 456889999999999999
Q ss_pred ccC----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 227 KPI----SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 227 ~~~----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.++ ..+++|++++..++++++++++++|+++++++.
T Consensus 341 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 341 AKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp EECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 875 357999999888999999999999999988764
No 59
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.93 E-value=3.5e-25 Score=194.90 Aligned_cols=242 Identities=13% Similarity=0.115 Sum_probs=178.9
Q ss_pred cccCC-CCCCceeecC------CCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHh-----cCCEE
Q psy6547 11 NEFGP-HMPGYNIIPY------NDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-----YNVLF 77 (266)
Q Consensus 11 ~~~~~-~~~~v~~~~~------~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~-----~g~~l 77 (266)
..+.. .+.+++.++. .|+++|++.+++.+ ++++++++.++|++|.+ ++.+.+++|+++|++ ||+++
T Consensus 152 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~~~~~~l 230 (430)
T 2x5f_A 152 LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYT-PTHKEVTTIVEAIKALANKGTKVIA 230 (430)
T ss_dssp HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHhhhhccCCEEE
Confidence 33455 6777777774 36899999996532 67887776668888876 899999999999999 99999
Q ss_pred EEeccccCcCCcCcc-c----cccc-CCC---CcCeeeeccccc-CCchhhhhhee---cHHhhhccCCCCCC----CCC
Q psy6547 78 IADEVQTGLGRTGKL-L----AIHY-EDV---RPDIVILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG----STY 140 (266)
Q Consensus 78 i~De~~~~~~~~g~~-~----~~~~-~~~---~~d~~~~sK~~~-~g~~~~g~~~~---~~~~~~~~~~~~~~----~~~ 140 (266)
|+||+|+++...|.. . .+.. .+. ...+.++||+++ +| +|+||+++ ++++.+.+...... .++
T Consensus 231 i~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 309 (430)
T 2x5f_A 231 VVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNIS 309 (430)
T ss_dssp EEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTS
T ss_pred EEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhhhhhcccC
Confidence 999999887554431 1 1211 222 233556999998 88 99999999 98888777643333 567
Q ss_pred CCcHHHHHHHHHHHH-HH---hh-ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHH
Q psy6547 141 GGNPLACKLAMTALD-VI---LE-ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDV 215 (266)
Q Consensus 141 ~~~~~~~~a~~~~l~-~~---~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 215 (266)
+.+++++.++..+|+ .. +. +...++++++++++.+.|++.+....+.......|. ++|+.++. .+..++
T Consensus 310 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~---~~~~~~~~---~~~~~~ 383 (430)
T 2x5f_A 310 SGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGY---FMAIKVHD---VDPEAL 383 (430)
T ss_dssp SCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSS---EEEEEESS---SCHHHH
T ss_pred CCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceE---EEEeCCCC---CCHHHH
Confidence 889999999998887 32 21 236777888888888888842111122221223456 78888862 467889
Q ss_pred HHHHHH-CCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 216 CIKMKD-AGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 216 ~~~l~~-~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+++|.+ +||.+.++..+++|++++. .+++++++++++|+++++++
T Consensus 384 ~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 384 RKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 999997 9999999877899999885 59999999999999998764
No 60
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.93 E-value=1.2e-24 Score=191.88 Aligned_cols=241 Identities=15% Similarity=0.084 Sum_probs=173.1
Q ss_pred ccccC-CCCCCceeecCC-------CHHHHHHHHhc----CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEE
Q psy6547 10 YNEFG-PHMPGYNIIPYN-------DVDALEAKLKS----NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 10 ~~~~~-~~~~~v~~~~~~-------d~~~l~~~l~~----~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
...+. ..+.+++.++++ |+++|++++++ ..++++|++++++|++|.+ ++.+.+++|+++|++||+++
T Consensus 149 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~l 227 (435)
T 3piu_A 149 DRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT-MTRNELYLLLSFVEDKGIHL 227 (435)
T ss_dssp HHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEE
Confidence 33444 567788888875 79999999965 2368998888888888876 89999999999999999999
Q ss_pred EEeccccCcCCcCcccc-ccc----CCCC-----cC----eeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCC
Q psy6547 78 IADEVQTGLGRTGKLLA-IHY----EDVR-----PD----IVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYG 141 (266)
Q Consensus 78 i~De~~~~~~~~g~~~~-~~~----~~~~-----~d----~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 141 (266)
|+||+|+++.+.|..+. ... .+.+ ++ +.++||+++ +| +|+||+++ ++.+.+.+.. ....+.
T Consensus 228 i~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~ 304 (435)
T 3piu_A 228 ISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--MSSFGL 304 (435)
T ss_dssp EEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH--HGGGSC
T ss_pred EEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH--HhhcCC
Confidence 99999988644443221 111 1111 22 566999998 88 99999998 5566655542 334456
Q ss_pred CcHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc----cchH
Q psy6547 142 GNPLACKLAMTALDVILE-----ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA----ILEV 212 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~ 212 (266)
.++++++++.++++..+. ++..++++++++++.+.|++ .+ +.......|. ++|+.++... ..+.
T Consensus 305 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~g~---~~~~~l~~~~~~~~~~~~ 377 (435)
T 3piu_A 305 VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SG---ISCLNGNAGL---FCWVDMRHLLRSNTFEAE 377 (435)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TT---CEECCCCSSS---EEEEECGGGSSSSSHHHH
T ss_pred CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC---CcccCCCeeE---EEEEEcccccccCCchhH
Confidence 678888887777763321 34566777788888888877 43 2221223457 8999887611 0146
Q ss_pred HHHHHHHHHC-CceeccC------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 213 YDVCIKMKDA-GLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 213 ~~~~~~l~~~-gi~~~~~------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++++|+++ ||.+.++ +.+++|++++.. +++++++++++|.++++++.
T Consensus 378 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 378 MELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHh
Confidence 6889999877 9999873 468999997655 99999999999999988753
No 61
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.93 E-value=1.4e-25 Score=197.09 Aligned_cols=241 Identities=15% Similarity=0.134 Sum_probs=173.9
Q ss_pred CCCCCCceeecCC----CHHHHHHHHhcCCCEEEEEEcc-ccCCCCcccCChHHHHHHHHHH-HhcCCEEEEeccccCcC
Q psy6547 14 GPHMPGYNIIPYN----DVDALEAKLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALC-SQYNVLFIADEVQTGLG 87 (266)
Q Consensus 14 ~~~~~~v~~~~~~----d~~~l~~~l~~~~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~-~~~g~~li~De~~~~~~ 87 (266)
...+.+++.++.+ |+++|++++++.+++++|+++| ++|++|.+ ++.+.+++|+++| ++||+++|+||+|..+.
T Consensus 142 ~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~~li~De~y~~~~ 220 (423)
T 3ez1_A 142 QTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGET-ISLEKARRLAGLQAAAPDFTIFADDAYRVHH 220 (423)
T ss_dssp HHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCC-CCHHHHHHHHTCCCSSTTCEEEEECTTSSCB
T ss_pred HHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHhccCCEEEEECCcchhh
Confidence 3445677777753 8999999996456899998886 56667766 8999999999999 99999999999997432
Q ss_pred CcC---c-c---ccc----ccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH
Q psy6547 88 RTG---K-L---LAI----HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV 156 (266)
Q Consensus 88 ~~g---~-~---~~~----~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 156 (266)
..+ . . +.+ +..+....+.++||++.+| +|+||+++++++.+.+.......+++++++.+.++..+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 221 LVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp CCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 222 1 1 111 1334556677899997789 99999999999888877655667788899999888888775
Q ss_pred -Hh---h--ccHHHHHHHHHHHHHHHhhcccccCC--CcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc
Q psy6547 157 -IL---E--ENMIENAYKMGEIFRSELSSPANKSK--ASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP 228 (266)
Q Consensus 157 -~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 228 (266)
.. . +...+.++++.+.+.+.|.+.+.... +....+..|+ ++|+.++. . +.+++.+.|.++||.+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~~~~--~-~~~~~~~~l~~~gv~v~~ 373 (423)
T 3ez1_A 300 YPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGY---FISLDTAE--P-VADRVVKLAEAAGVSLTP 373 (423)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSS---CEEEEESS--S-CHHHHHHHHHHTTEECCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccE---EEEEECCC--C-cHHHHHHHHHHCCcEEec
Confidence 11 1 12333444455555555544232211 2211234677 89999876 3 577899999999999998
Q ss_pred C----------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 229 I----------SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 229 ~----------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+ ..+++|++++.. +++++++++++|.+++++...
T Consensus 374 ~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 374 AGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp TTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 2 258999998655 999999999999999987654
No 62
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=5.7e-26 Score=198.90 Aligned_cols=232 Identities=14% Similarity=0.164 Sum_probs=173.5
Q ss_pred CCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 16 HMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
.+.+++.++.+ |+++|++.++ +++++|+++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++..
T Consensus 143 ~g~~~~~~~~~~~~~~~~d~~~l~~~i~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 219 (412)
T 2x5d_A 143 AGAQVRSVPLVPGIDFFNELERAIRESI--PKPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVY 219 (412)
T ss_dssp HTCEEEEEECSTTSCHHHHHHHHHHTEE--SCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred cCCEEEEeecCCccCCCCCHHHHHHhcc--cCceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 45567777654 4677888774 457788876667888876 8999999999999999999999999988755
Q ss_pred cCc-cccccc----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh--c
Q psy6547 89 TGK-LLAIHY----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--E 160 (266)
Q Consensus 89 ~g~-~~~~~~----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~ 160 (266)
.|. ...+.. .+.++.+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++..+|+.... +
T Consensus 220 ~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 298 (412)
T 2x5d_A 220 DGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVR 298 (412)
T ss_dssp TTCCCCCGGGSTTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHH
T ss_pred CCCCCCChhhccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHH
Confidence 443 112221 234555677999998 89 89999999999888776544455678899999988888864321 4
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccc---hHHHHHHHHHH-CCceeccC------C
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAIL---EVYDVCIKMKD-AGLVTKPI------S 230 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~l~~-~gi~~~~~------~ 230 (266)
++.++++++++++.+.|++ .+.... ....|. ++|+.++. +. +..+++++|.+ +||.+.++ +
T Consensus 299 ~~~~~~~~~~~~l~~~L~~-~g~~~~---~~~~g~---~~~~~~~~--~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~ 369 (412)
T 2x5d_A 299 DIARQYQQRRDVLVKGLRE-AGWMVE---NPKASM---YVWAKIPE--PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYG 369 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTCCCC---CCSBSS---EEEEECCT--TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHHHHH-CCCEec---CCCeee---EEEEEcCC--ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCC
Confidence 5677788888889888887 432221 223466 78888865 33 57889999875 69999875 2
Q ss_pred CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 ~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++|++++. +++++++++++|.+++++..
T Consensus 370 ~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 370 DDHVRFALIE--NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp TTEEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence 5799999774 89999999999999988753
No 63
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.93 E-value=4.9e-25 Score=189.90 Aligned_cols=234 Identities=12% Similarity=0.072 Sum_probs=179.5
Q ss_pred CcCcccccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc--CCEEE
Q psy6547 6 DPTSYNEFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFI 78 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~--g~~li 78 (266)
++.....+...+.+++.++.+ |+++|++.++++ ++++|++++++|++|.+ ++.+.+++|+++|++| |+++|
T Consensus 119 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~~~li 196 (367)
T 3euc_A 119 FVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEH-QPAIVYLAYPNNPTGNL-FDAADMEAIVRAAQGSVCRSLVV 196 (367)
T ss_dssp SCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHH-CCSEEEEESSCTTTCCC-CCHHHHHHHHHHTBTTSCBCEEE
T ss_pred HHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhcc-CCCEEEEcCCCCCCCCC-CCHHHHHHHHHhhhhcCCCcEEE
Confidence 334444455667788888843 899999999542 57888888888888876 7999999999999999 99999
Q ss_pred EeccccCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q psy6547 79 ADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL 158 (266)
Q Consensus 79 ~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 158 (266)
+||+|++|...+........+..+.+.++||+..+| +|+||+++++++.+.+.. ...+++.+++++.++..+++..+
T Consensus 197 ~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~ 273 (367)
T 3euc_A 197 VDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAG-IRLGYVAGDPQWLEQLDK--VRPPYNVNVLTEATALFALEHVA 273 (367)
T ss_dssp EECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCS-CCEEEEEECHHHHHHHGG--GCCSSCCCHHHHHHHHHHHTTHH
T ss_pred EeCcchhhcccchHHHHhhCCCEEEEecchhhcccc-cCceeeeeCHHHHHHHHH--hCCCCCCCHHHHHHHHHHhcCHH
Confidence 999998875443333344455566777899994488 899999999998888764 33467789999999998887622
Q ss_pred h-ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC------C
Q psy6547 159 E-ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS------N 231 (266)
Q Consensus 159 ~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~ 231 (266)
. ++..++++++++++.+.|++ +. .+.. .++.|. ++++.++ +..++.+.|.++||.++++. .
T Consensus 274 ~~~~~~~~~~~~~~~l~~~l~~-~~--g~~~-~~~~~~---~~~~~~~-----~~~~l~~~l~~~gi~v~~~~~~~~~~~ 341 (367)
T 3euc_A 274 VLDEQAAQLRAERSRVAEGMAA-HG--GVTV-FPSAAN---FLLARVP-----DAAQTFDRLLARKVLIKNVSKMHPLLA 341 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-ST--TCEE-CCCSSS---EEEEECS-----CHHHHHHHHHTTTEECEECGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CC--CcEE-CCCCCe---EEEEECC-----CHHHHHHHHHHCCeEEEECCccCCCCC
Confidence 1 45677788888888888887 42 2332 345577 8888775 46789999999999998753 4
Q ss_pred CEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 232 NIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 232 ~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
+++|++++ +++++++++++|+++++
T Consensus 342 ~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 342 NCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp TEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred CEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 89999944 99999999999998753
No 64
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.93 E-value=2e-26 Score=201.41 Aligned_cols=232 Identities=15% Similarity=0.110 Sum_probs=173.9
Q ss_pred CCCCCCceeecC------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 14 GPHMPGYNIIPY------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 14 ~~~~~~v~~~~~------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
...+.+++.++. .|+++|++.++ +++++|+++.++|++|.+ ++.+++++|+++|++||+++|+||+|+++.
T Consensus 151 ~~~g~~~~~v~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 227 (404)
T 2o1b_A 151 LLADGKPVPLNLEPPHYLPDWSKVDSQII--DKTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFG 227 (404)
T ss_dssp HHTTCEEEEEECCTTTCCCCGGGSCHHHH--HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCB
T ss_pred HHCCCEEEEeccCcccCcCCHHHHHHhhc--cCceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 334566777764 36888988884 468899888778888876 899999999999999999999999998875
Q ss_pred CcCccccccc----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--hc
Q psy6547 88 RTGKLLAIHY----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EE 160 (266)
Q Consensus 88 ~~g~~~~~~~----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~ 160 (266)
..|....... .+.++.+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++.++|+... -+
T Consensus 228 ~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 306 (404)
T 2o1b_A 228 FDAKNPSILASENGKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLE 306 (404)
T ss_dssp SSSCCCCGGGSTTHHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH
T ss_pred cCCCCCChhhcCCCCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHH
Confidence 4443222211 123455677999998 88 8999999999988877654445567788999999888887521 13
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC------CCCE
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI------SNNI 233 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~ 233 (266)
+..++++++++++.+.|++ ++ +.......|. ++|+.++. +.+..+++++|+ ++||.+.++ +.++
T Consensus 307 ~~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~g~---~~~~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~ 377 (404)
T 2o1b_A 307 EQSNVFKTRRDRFEAMLAK-AD---LPFVHAKGGI---YVWLETPP--GYDSEQFEQFLVQEKSILVAPGKPFGENGNRY 377 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TT---CCEECCCBSS---EEEEECCT--TCCHHHHHHHHHHHHCEECEESGGGCGGGTTE
T ss_pred HHHHHHHHHHHHHHHHHHh-cC---CeecCCCcce---EEEEeCCC--CCCHHHHHHHHHHHCCEEEeCchhhCcCCCCe
Confidence 4667777888888888887 42 2221122466 78888875 456788999987 579999875 2579
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+|++++. +++++++++++|.+++++
T Consensus 378 iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 378 VRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp EEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred EEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 9999774 788999999999987754
No 65
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=7.9e-26 Score=196.64 Aligned_cols=228 Identities=20% Similarity=0.185 Sum_probs=173.1
Q ss_pred CCCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 14 GPHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 14 ~~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
...+.+++.++.+ |+++|+++++ +++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++
T Consensus 143 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 219 (389)
T 1o4s_A 143 ILAGGTVNVVETFMSKNFQPSLEEVEGLLV--GKTKAVLINSPNNPTGVV-YRREFLEGLVRLAKKRNFYIISDEVYDSL 219 (389)
T ss_dssp HHTTCEEEEEECCGGGTTCCCHHHHHHTCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred HHcCCEEEEEecCCccCCCCCHHHHHHhcc--cCceEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 3456677777753 7899999983 468888888888888876 88999999999999999999999999877
Q ss_pred CCcCccccccc----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc
Q psy6547 87 GRTGKLLAIHY----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEEN 161 (266)
Q Consensus 87 ~~~g~~~~~~~----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 161 (266)
...|....... .+.+..+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++..+|+.. .++
T Consensus 220 ~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~ 297 (389)
T 1o4s_A 220 VYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSY 297 (389)
T ss_dssp BCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHH
T ss_pred ccCCCCCCHhhcCCCCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc-HHH
Confidence 54443222211 234455667999998 88 899999999988877765444456777888888887777532 355
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccCC----CCEEEE
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPIS----NNIIRL 236 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~----~~~iR~ 236 (266)
+.++++++++++.+.|++ ++.... ....|. ++++.++ .+..+++++|+ ++||.+.++. .+++|+
T Consensus 298 ~~~~~~~~~~~l~~~L~~-~g~~~~---~~~~~~---~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ri 366 (389)
T 1o4s_A 298 MVQTFKERKNFVVERLKK-MGVKFV---EPEGAF---YLFFKVR----GDDVKFCERLLEEKKVALVPGSAFLKPGFVRL 366 (389)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCCC---CCSBSS---EEEEECS----SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHh-cCCeee---cCCcce---EEEEeCC----CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEE
Confidence 788888999999999988 532222 122456 7777775 25678999997 8899998752 479999
Q ss_pred eccCCCCHHHHHHHHHHHHHHHH
Q psy6547 237 SPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 237 ~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
+++ .+++++++++++|.++++
T Consensus 367 s~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 367 SFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp ECC--SCHHHHHHHHHHHHHHHT
T ss_pred EEe--CCHHHHHHHHHHHHHHHh
Confidence 976 499999999999998874
No 66
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.93 E-value=2.7e-25 Score=192.80 Aligned_cols=238 Identities=14% Similarity=0.155 Sum_probs=177.2
Q ss_pred cCCCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 13 FGPHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 13 ~~~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
+...+.+++.++. .|+++|++++++ +++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~ 203 (391)
T 3dzz_A 126 IEGNGRRVISSDLIYENSKYSVNWADLEEKLAT-PSVRMMVFCNPHNPIGYA-WSEEEVKRIAELCAKHQVLLISDEIHG 203 (391)
T ss_dssp HHHTTCEEEECCCEEETTEEECCHHHHHHHHTS-TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHcCCEEEEeeeeecCCceeecHHHHHHHHhc-cCceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 3445677788776 589999999953 478999888888888876 899999999999999999999999998
Q ss_pred CcCCcCc-ccccccCCC-CcC----eeeeccccc-CCchhhhhheec-HHhhhccCCCC-CCCCCCCcHHHHHHHHHHHH
Q psy6547 85 GLGRTGK-LLAIHYEDV-RPD----IVILGKALS-GGLYPISAVLAD-DEVMGTLVPGT-HGSTYGGNPLACKLAMTALD 155 (266)
Q Consensus 85 ~~~~~g~-~~~~~~~~~-~~d----~~~~sK~~~-~g~~~~g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~ 155 (266)
++.+.|. .......+. .+| +.++||+++ +| +|+||++++ +++.+.+.... ...+++.+++++.++..+++
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 282 (391)
T 3dzz_A 204 DLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYE 282 (391)
T ss_dssp TCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHH
T ss_pred cccCCCCCceehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHh
Confidence 8766553 223333221 255 556999998 88 899999997 88877776432 23456788888888888887
Q ss_pred HHh--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccCC--
Q psy6547 156 VIL--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPIS-- 230 (266)
Q Consensus 156 ~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~-- 230 (266)
... .++..++++++++++.+.|++.++ .+.......+. ++++.++.. +.+..+++++|+ ++||.++++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~ 356 (391)
T 3dzz_A 283 EGHDWLRELKQVLRDNFAYAREFLAKEVP--EVKVLDSNASY---LAWVDISAL-GMNAEDFCKYLREKTGLIISAGNGY 356 (391)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHCT--TSEECCCCBSS---EEEEECGGG-CSCHHHHHHHHHHHHCEECEESGGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhCC--CcEEeccCceE---EEEEehhhc-CCCHHHHHHHHHHhCCEEEeCchhh
Confidence 632 245677788888888888876222 22221223455 667777641 246889999996 8999998752
Q ss_pred ----CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 231 ----NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 231 ----~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.+++|++++ ++++++++++++|.++++++
T Consensus 357 ~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 357 RGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp CTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 389999966 69999999999999998764
No 67
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.93 E-value=8.8e-25 Score=190.47 Aligned_cols=232 Identities=19% Similarity=0.256 Sum_probs=181.2
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcC-C---CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcC
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSN-P---NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLG 87 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~-~---~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~ 87 (266)
....+.+++.++++|+++|++++++. + ++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++.
T Consensus 146 ~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~li~De~~~~g~~ 221 (401)
T 1fc4_A 146 VRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA----NLKGVCDLADKYDALVMVDDSHAVGFV 221 (401)
T ss_dssp HHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC----CHHHHHHHHHHTTEEEEEECTTTTTTS
T ss_pred HHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC----CHHHHHHHHHHcCCEEEEECccccccc
Confidence 34457788899999999999999642 1 578999999999999885 49999999999999999999994 763
Q ss_pred -CcCcccccccCCC--CcCee--eecccccCCchhhhhheecHHhhhccCCCC--CCCCCCCcHHHHHHHHHHHHHHhh-
Q psy6547 88 -RTGKLLAIHYEDV--RPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE- 159 (266)
Q Consensus 88 -~~g~~~~~~~~~~--~~d~~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~- 159 (266)
+.|..+. ...++ ..|++ ++||+++++ . .||+++++++++.+.... ...+++.+++.++++.++++.+..
T Consensus 222 ~~~g~~~~-~~~~~~~~~di~~~s~sK~~~~~-~-gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 298 (401)
T 1fc4_A 222 GENGRGSH-EYCDVMGRVDIITGTLGKALGGA-S-GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAG 298 (401)
T ss_dssp STTSCCHH-HHTTCTTCCSEEEEESSSTTCSS-S-CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCCccH-HHcCCCcCCcEEEecchhhccCC-C-CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcC
Confidence 3454321 11222 23555 699999766 4 599999998887776422 223567899999999999988764
Q ss_pred ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-------CC
Q psy6547 160 ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------NN 232 (266)
Q Consensus 160 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~ 232 (266)
+++.++++++++++.+.|++ ++. .. ..+.|. ++++.++. +.+..+++++|.++||.+.++. .+
T Consensus 299 ~~~~~~~~~~~~~l~~~L~~-~g~---~~-~~~~~~---~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~ 368 (401)
T 1fc4_A 299 SELRDRLWANARQFREQMSA-AGF---TL-AGADHA---IIPVMLGD--AVVAQKFARELQKEGIYVTGFFYPVVPKGQA 368 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTC---CB-CCSSSS---EEEEEEEC--HHHHHHHHHHHHHTTEECCEECTTSSCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCC---cc-cCCCCC---EEEEEcCC--hHHHHHHHHHHHHCCcEEeeecCCCCCCCCc
Confidence 56889999999999999988 532 22 234577 99999875 4568889999999999998752 35
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++|++++..++++++++++++|+++++++
T Consensus 369 ~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 369 RIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 89999988899999999999999998764
No 68
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.93 E-value=1.4e-25 Score=195.05 Aligned_cols=237 Identities=14% Similarity=0.126 Sum_probs=173.9
Q ss_pred ccCCCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 12 EFGPHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
.+...+.+++.++.+ |+++|++. ++++|++++++|++|.+ ++.+.+++|+++|++||+++|+||+|+
T Consensus 131 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-----~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~ 204 (391)
T 3h14_A 131 ILRALGLVPVDLPTAPENRLQPVPADFAGL-----DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYH 204 (391)
T ss_dssp HHHHTTCEEEEEECCGGGTTSCCHHHHTTS-----CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHcCCEEEEeecCcccCCCCCHHHHHhc-----CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 344557778888765 66666544 57888888888888876 899999999999999999999999998
Q ss_pred CcCCcCcccccc-cCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh-hcc
Q psy6547 85 GLGRTGKLLAIH-YEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EEN 161 (266)
Q Consensus 85 ~~~~~g~~~~~~-~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~ 161 (266)
++...|...... ..+....+.++||.++ +| +|+||+++++++.+.+.......+++++++++.++.++++..+ -++
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 283 (391)
T 3h14_A 205 GIEYEAKAVTALELTDECYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQA 283 (391)
T ss_dssp TCBSSSCCCCGGGTCSSSEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHH
T ss_pred hcccCCCCcChhhcCCCEEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHH
Confidence 876555432222 2233445557999998 89 9999999999888877655556677888999888888876211 134
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccC-------CCCE
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPI-------SNNI 233 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~-------~~~~ 233 (266)
..++++++++.+.+.|++ ++...+. ....+. ++++.++.. +.+..+++++|+++ ||.+.++ ..++
T Consensus 284 ~~~~~~~~~~~l~~~l~~-~~~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~ 356 (391)
T 3h14_A 284 NLDVYKANRKLMLERLPK-AGFTRIA--PPDGAF---YVYADVSDL-TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGT 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTCCCBC--CCCBTT---EEEEECTTT-CSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGE
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCccc--CCCeeE---EEEEecCcc-CCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCe
Confidence 667777888888888887 5432211 223356 777777531 24678899998875 9999874 2579
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 234 IRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
+|++++. +++++++++++|++++++..++
T Consensus 357 iRis~~~--~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 357 LRFSYAR--ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp EEEECCS--CHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEecC--CHHHHHHHHHHHHHHHHHhccc
Confidence 9999664 8999999999999999887654
No 69
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.93 E-value=2.1e-25 Score=193.63 Aligned_cols=233 Identities=18% Similarity=0.171 Sum_probs=171.1
Q ss_pred cCCCCCCceeecC-------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 13 FGPHMPGYNIIPY-------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 13 ~~~~~~~v~~~~~-------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
+...+.+++.++. .|+++|++++ .+++++|+++.++|++|.+ ++.+.+++|.++|++||++||+||+|+.
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (385)
T 1b5p_A 132 VRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAV-YPKEVLEALARLAVEHDFYLVSDEIYEH 208 (385)
T ss_dssp HHHTTCEEEEEECCGGGTTCCCHHHHHTTC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHcCCEEEEeecCcccCCCCCHHHHHHhc--CCCCEEEEEeCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 3445667777775 2688999888 3468888887778888876 8999999999999999999999999987
Q ss_pred cCCcCcccccccC--CCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH---Hhh
Q psy6547 86 LGRTGKLLAIHYE--DVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV---ILE 159 (266)
Q Consensus 86 ~~~~g~~~~~~~~--~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~ 159 (266)
+...|....+..+ +....+.++||.++ +| +|+||+++++++.+.+.......+++.+.+.+.++.++|+. ...
T Consensus 209 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 287 (385)
T 1b5p_A 209 LLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRA 287 (385)
T ss_dssp CBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHH
T ss_pred cccCCCCCCHHHcCCCCEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchH
Confidence 6443322222222 23344556999998 78 99999999998887776544445667788888888888853 222
Q ss_pred --ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----CCE
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS----NNI 233 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~ 233 (266)
++..++++++++++.+.|++ ++.... .+..+. ++|+.++.. +.+..+++++|.++||.+.++. .++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~L~~-~g~~~~---~~~~~~---~~~~~~~~~-~~~~~~l~~~l~~~gv~v~~g~~f~~~~~ 359 (385)
T 1b5p_A 288 FVEMAREAYRRRRDLLLEGLTA-LGLKAV---RPSGAF---YVLMDTSPI-APDEVRAAERLLEAGVAVVPGTDFAAFGH 359 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTCCBC---CCSBTT---EEEEECTTT-CSSHHHHHHHHHHTTEECEESGGGTCTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-CCCeec---CCCeeE---EEEEecCCC-CCCHHHHHHHHHHCCeEEecccccCCCCe
Confidence 34677788888888888887 432211 223455 677777521 3467889999999999998762 479
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
+|++.. ++++++++++++|.++++
T Consensus 360 iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 360 VRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp EEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred EEEEec--CCHHHHHHHHHHHHHHHh
Confidence 999954 799999999999987654
No 70
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.93 E-value=4.2e-25 Score=190.09 Aligned_cols=223 Identities=11% Similarity=0.079 Sum_probs=168.3
Q ss_pred cCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 13 FGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 13 ~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+...+.+++.++.+ |++++++.+ .++++++++++++|++|.+ ++.+.+.++++.|++ |+++|+||+|+++.
T Consensus 125 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i--~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~-~~~li~De~~~~~~ 200 (363)
T 3ffh_A 125 ALIEGAEVREIPLLQDGEHDLEGMLNAI--DEKTTIVWICNPNNPTGNY-IELADIQAFLDRVPS-DVLVVLDEAYIEYV 200 (363)
T ss_dssp HHHHTCEEEEEECCTTSCCCHHHHHHHC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHTTSCT-TSEEEEECTTGGGC
T ss_pred HHHcCCEEEEecCCCCCCcCHHHHHHhc--ccCCCEEEEeCCCCCcCCC-cCHHHHHHHHHhCCC-CcEEEEeCchHhhc
Confidence 34456788888877 899999999 4578999998888989987 677777777777666 99999999998776
Q ss_pred CcCccccc-cc---CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh-cc
Q psy6547 88 RTGKLLAI-HY---EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-EN 161 (266)
Q Consensus 88 ~~g~~~~~-~~---~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~ 161 (266)
+ +..... .. .+....+.++||.++ +| +|+||+++++++.+.+.... .+++.++++++++.++++..+. ++
T Consensus 201 ~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~ 276 (363)
T 3ffh_A 201 T-PQPEKHEKLVRTYKNLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVR--PPFNTTSIGQKLAIEAIKDQAFIGE 276 (363)
T ss_dssp S-SCCCCCGGGGGTCTTEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTC--CSCCCBHHHHHHHHHHHHCHHHHHH
T ss_pred C-ccccCHHHHhhcCCCEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHH
Confidence 5 432221 11 111222566999999 88 89999999999988776533 3678899999999988864321 34
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----CCEEEEe
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS----NNIIRLS 237 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~iR~~ 237 (266)
..++++++++++.+.|++ . ..+.. .++.|. ++++.++. +..+++++|.++||.++++. .+++|++
T Consensus 277 ~~~~~~~~~~~l~~~l~~-~--~g~~~-~~~~~~---~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis 345 (363)
T 3ffh_A 277 CRTSNANGIKQYEAFAKR-F--EKVKL-YPANGN---FVLIDLGI----EAGTIFSYLEKNGYITRSGAALGFPTAVRIT 345 (363)
T ss_dssp HHHHHHHHHHHHHHHHHH-C--TTCEE-CCCCSS---EEEEECSS----CHHHHHHHHHHTTEECEETTTTTCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHhh-C--CCceE-CCCCCe---EEEEECCC----CHHHHHHHHHHCCeEEEeCccCCCCCeEEEE
Confidence 666777777778777776 2 22332 344567 88888865 67889999999999999853 5899999
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q psy6547 238 PALNITEQELREGLDIIINT 257 (266)
Q Consensus 238 ~~~~~t~~~i~~~~~~l~~~ 257 (266)
++ +++++++++++|+++
T Consensus 346 ~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 346 IG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp CC---CHHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHh
Confidence 54 999999999999875
No 71
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.93 E-value=3.2e-25 Score=195.19 Aligned_cols=239 Identities=14% Similarity=0.102 Sum_probs=176.1
Q ss_pred cccCCCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 11 NEFGPHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..+...+.+++.++++ |+++|++.++ +++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~~i~Deay 233 (427)
T 3dyd_A 157 TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID--EKTACLIVNNPSNPCGSV-FSKRHLQKILAVAARQCVPILADEIY 233 (427)
T ss_dssp HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHhc--cCCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEcCc
Confidence 3345567778887763 7899999883 457888877778888876 89999999999999999999999999
Q ss_pred cCcCCcCccc-ccccCCCCcCee---eeccccc-CCchhhhhheec-------HHhhhccCCCCCCCCCCCcHHHHHHHH
Q psy6547 84 TGLGRTGKLL-AIHYEDVRPDIV---ILGKALS-GGLYPISAVLAD-------DEVMGTLVPGTHGSTYGGNPLACKLAM 151 (266)
Q Consensus 84 ~~~~~~g~~~-~~~~~~~~~d~~---~~sK~~~-~g~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~ 151 (266)
.+|++.|..+ .....+..++++ ++||.++ +| +|+||++++ +++.+.+... ...++++++++++++.
T Consensus 234 ~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~~a~~ 311 (427)
T 3dyd_A 234 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPG-WRLGWILIHDRRDIFGNEIRDGLVKL-SQRILGPCTIVQGALK 311 (427)
T ss_dssp TTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG-GCCEEEEEECSTTSSHHHHHHHHHHH-HHHHCCSCHHHHHHHH
T ss_pred hhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcC-cceEEEEecCcchhhHHHHHHHHHHH-HhccCCCCHHHHHHHH
Confidence 9887666432 333344444455 6999976 78 999999987 3555554432 1225778999999999
Q ss_pred HHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeC---ccchHHHHHHHHH-HCCc
Q psy6547 152 TALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVS---AILEVYDVCIKMK-DAGL 224 (266)
Q Consensus 152 ~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~l~-~~gi 224 (266)
++|+.... ++..++++++++++.+.|++ +. .+....+..|+ ++++.++.. +..+..+++++|+ ++||
T Consensus 312 ~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~p~~g~---~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV 385 (427)
T 3dyd_A 312 SILCRTPGEFYHNTLSFLKSNADLCYGALAA-IP--GLRPVRPSGAM---YLMVGIEMEHFPEFENDVEFTERLVAEQSV 385 (427)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-ST--TEEEECCSBTT---EEEEEECGGGCTTCSSHHHHHHHHHHHHCE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc-CC--CceecCCCeeE---EEEEecCHhhcCCCCCHHHHHHHHHHHCCE
Confidence 88874222 34667778888888888887 42 23221234567 888887631 0245788999886 8899
Q ss_pred eeccC----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 225 VTKPI----SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 225 ~~~~~----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+.++ ..+++|+++ ..+++++++++++|.++++++.
T Consensus 386 ~v~~g~~~~~~~~iRis~--~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 386 HCLPATCFEYPNFIRVVI--TVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp ECEEGGGGTCTTEEEEES--CSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCcccCCCCeEEEEE--CCCHHHHHHHHHHHHHHHHHhh
Confidence 99875 368999995 4799999999999999998754
No 72
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.93 E-value=1.5e-24 Score=190.77 Aligned_cols=233 Identities=16% Similarity=0.118 Sum_probs=172.0
Q ss_pred CCCCCceeecCC-------CHHHHHHHHhc----CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 15 PHMPGYNIIPYN-------DVDALEAKLKS----NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 15 ~~~~~v~~~~~~-------d~~~l~~~l~~----~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..+.+++.++.+ |+++|++.+++ .+++++|++++++|++|.+ ++.+.+++|+++|++||+++|+||+|
T Consensus 152 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~ 230 (428)
T 1iay_A 152 RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT-LDKDTLKSVLSFTNQHNIHLVCDEIY 230 (428)
T ss_dssp TTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECTT
T ss_pred hcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHCCeEEEEeccc
Confidence 456777888753 78999999864 2368888877778888876 89999999999999999999999999
Q ss_pred cCcCCcCccc-c---cccC----CCCcC----eeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHH
Q psy6547 84 TGLGRTGKLL-A---IHYE----DVRPD----IVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKL 149 (266)
Q Consensus 84 ~~~~~~g~~~-~---~~~~----~~~~d----~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a 149 (266)
+++.+.+..+ . +... +..+| +.++||+++ +| +|+||+++ ++++.+.+.. ...+++.+++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a 307 (428)
T 1iay_A 231 AATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARK--MSSFGLVSTQTQYF 307 (428)
T ss_dssp GGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHH--HHTTSCCCHHHHHH
T ss_pred cccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHH--HHhcccCCHHHHHH
Confidence 8864443321 1 1111 12245 566999998 88 99999998 6777776653 22346678889988
Q ss_pred HHHHHHHHh-----hccHHHHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEEEeeCc----cchHHHHHHHH
Q psy6547 150 AMTALDVIL-----EENMIENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLILSVSA----ILEVYDVCIKM 219 (266)
Q Consensus 150 ~~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~----~~~~~~~~~~l 219 (266)
+..+++... -+++.++++++++++.+.|++ ++ +.. ..+ .|+ |+|+.++... ..+..+++++|
T Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g---~~~-~~~~~g~---~~~~~~~~~~~~~~~~~~~~l~~~l 379 (428)
T 1iay_A 308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-VG---IKC-LKNNAGL---FCWMDLRPLLRESTFDSEMSLWRVI 379 (428)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT---CCB-CCCSSSS---EEEEECGGGCSSSSHHHHHHHHHHH
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC---Ccc-cCCCeeE---EEEEechhhcCCCchhHHHHHHHHH
Confidence 888886532 135677788888888888887 43 222 223 577 8899886510 02456899999
Q ss_pred HHC-CceeccCC------CCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 220 KDA-GLVTKPIS------NNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 220 ~~~-gi~~~~~~------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.++ ||.++++. .+++|++++ .++++++++++++|++++++
T Consensus 380 ~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 380 INDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred HHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 876 99998752 479999987 57999999999999998764
No 73
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.92 E-value=2.2e-25 Score=196.04 Aligned_cols=244 Identities=18% Similarity=0.115 Sum_probs=178.0
Q ss_pred cccCCCCCCceeecCC----CHHHHHHHHhcCCCEEEEEEcc-ccCCCCcccCChHHHHHHHHHH-HhcCCEEEEecccc
Q psy6547 11 NEFGPHMPGYNIIPYN----DVDALEAKLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALC-SQYNVLFIADEVQT 84 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~----d~~~l~~~l~~~~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~-~~~g~~li~De~~~ 84 (266)
..+...+.+++.++.+ |+++|+++++ .+++++|+++| .+|++|.+ ++.+.+++|+++| ++||+++|+||+|+
T Consensus 148 ~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~-~~~~~~v~~~p~~~NPtG~~-~~~~~~~~l~~~a~~~~~~~ii~De~y~ 225 (427)
T 3ppl_A 148 SITERFGFEMISVPMNEDGPDMDAVEELVK-NPQVKGMWVVPVFSNPTGFT-VTEDVAKRLSAMETAAPDFRVVWDNAYA 225 (427)
T ss_dssp HHHHHTTCEEEEEEEETTEECHHHHHHHTT-STTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHh-cCCCeEEEECCCCCCCCCcc-CCHHHHHHHHHHHhhcCCCEEEEECCCc
Confidence 3445567778887754 8999999993 34789999886 46667766 8999999999999 99999999999998
Q ss_pred Cc--CCcCccc-cc-------ccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHH
Q psy6547 85 GL--GRTGKLL-AI-------HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTAL 154 (266)
Q Consensus 85 ~~--~~~g~~~-~~-------~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 154 (266)
++ ...+... .. +..+..+.+.++||++.+| +|+||+++++++.+.+.......+++.+++.+.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l 304 (427)
T 3ppl_A 226 VHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYF 304 (427)
T ss_dssp TCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred ccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Confidence 74 3222111 11 1345566777899997789 999999999998888776555667778888888888777
Q ss_pred HHH---hh--ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc
Q psy6547 155 DVI---LE--ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP 228 (266)
Q Consensus 155 ~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 228 (266)
+.. .. ....+.++++.+.+.+.|.+.+.. ..+....+..|+ ++|+.++. . +..++.+.|.++||.+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~---~~~~~~~~--~-~~~~~~~~l~~~gv~v~~ 378 (427)
T 3ppl_A 305 GDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGY---FISLDVVP--G-TASRVAELAKEAGIALTG 378 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSS---CEEEECST--T-CHHHHHHHHHHTTEECCC
T ss_pred hChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccE---EEEEECCc--c-hHHHHHHHHHHCCCEEec
Confidence 541 11 234455555666666666542322 122221234577 89999876 3 578899999999999998
Q ss_pred C----------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 229 I----------SNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 229 ~----------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
+ ..+++|++++.. +++++++++++|.+++++...+
T Consensus 379 ~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 379 AGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp TTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 2 358999998654 9999999999999999886544
No 74
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.92 E-value=3.4e-26 Score=197.66 Aligned_cols=235 Identities=12% Similarity=0.096 Sum_probs=173.4
Q ss_pred cCCCCCCceeecCC---CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 13 FGPHMPGYNIIPYN---DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 13 ~~~~~~~v~~~~~~---d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+...+.+++.++.+ |+++|++.+++ ++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++.+.
T Consensus 122 ~~~~g~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 198 (377)
T 3fdb_A 122 LSATQREGIFIDATGGINLHDVEKGFQA--GARSILLCNPYNPLGMV-FAPEWLNELCDLAHRYDARVLVDEIHAPLVFD 198 (377)
T ss_dssp HHHHTCCEEEEECTTSCCHHHHHHHHHT--TCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS
T ss_pred HHHcCCEEEEccCCCCCCHHHHHHHhcc--CCCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccchhhcC
Confidence 33456778888876 89999999954 36677777778888876 89999999999999999999999999887665
Q ss_pred C-c-cccc---ccCCCCcCeeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh--c
Q psy6547 90 G-K-LLAI---HYEDVRPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--E 160 (266)
Q Consensus 90 g-~-~~~~---~~~~~~~d~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~ 160 (266)
| . ...+ ...+..+++.++||+++ +| +|+||++. ++++.+.+.......+++.++++++++.++++.... +
T Consensus 199 g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 277 (377)
T 3fdb_A 199 GQHTVAAGVSDTAASVCITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLN 277 (377)
T ss_dssp SCCCCGGGSCHHHHHHEEEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHH
T ss_pred CCCCcccHHHccCCCcEEEEEeChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHH
Confidence 5 2 1111 11233466777999997 88 99998766 778877776655566778899999998888875322 4
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccCC------CCE
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPIS------NNI 233 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~~------~~~ 233 (266)
+..++++++++++.+.|++.++ .+.......+. ++|+.++.. +. ..++++.|+++ ||.+.++. .++
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~---~~~~~~~~~-~~-~~~~~~~l~~~~gi~v~~g~~~~~~~~~~ 350 (377)
T 3fdb_A 278 QEVAYLKNNHDFLLHEIPKRIP--GAKITPMQATY---LMWIDFRDT-TI-EGSPSEFFIEKAKVAMNDGAWFGEDGTGF 350 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST--TCEECCCSBCS---EEEEECTTS-CC-CSCHHHHHHHHHCEECEEGGGGCGGGTTE
T ss_pred HHHHHHHHHHHHHHHHHHhhCC--CceEecCCeeE---EEEEECccc-CC-CHHHHHHHHHhCCEEecCChhccCCCCCE
Confidence 5677788888888888876222 22221222344 567877652 12 25678888765 99998752 589
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+|++++ .+++++++++++|++++++
T Consensus 351 ~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 351 CRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp EEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 999966 5899999999999998865
No 75
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1e-25 Score=197.22 Aligned_cols=235 Identities=16% Similarity=0.163 Sum_probs=173.6
Q ss_pred CCCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 14 GPHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 14 ~~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
...+.+++.++. .|+++|++.++ +++++|++++++|++|.+ ++.+.+++|+++|++||+++|+||+|++
T Consensus 128 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 204 (411)
T 2o0r_A 128 AMAGAHRVTVPLVPDGRGFALDADALRRAVT--PRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEH 204 (411)
T ss_dssp HHTTCEEEEEECEEETTEEECCHHHHHHHCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHcCCEEEEeeccccccCCCCCHHHHHHhhc--cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 334567777764 48999999993 478999988888888876 8899999999999999999999999988
Q ss_pred cCCcCcc-ccccc----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q psy6547 86 LGRTGKL-LAIHY----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE 159 (266)
Q Consensus 86 ~~~~g~~-~~~~~----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 159 (266)
+...|.. ..+.. .+.++.+.++||.++ +| +|+||+++++++.+.+.......+++.+++.++++..+|+....
T Consensus 205 ~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 283 (411)
T 2o0r_A 205 LVFDHARHLPLAGFDGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDA 283 (411)
T ss_dssp CBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHH
T ss_pred cccCCCCCcChhhccCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChH
Confidence 7554431 12221 234556677999998 88 99999999998887776544445666777888888888875322
Q ss_pred --ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC-------
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI------- 229 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------- 229 (266)
+++.++++++++++.+.|++ .+. .......|. ++|+.++...+.+..+++++|. ++||.+.++
T Consensus 284 ~~~~~~~~~~~~~~~l~~~L~~-~g~---~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~ 356 (411)
T 2o0r_A 284 WVAALRNSLRARRDRLAAGLTE-IGF---AVHDSYGTY---FLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPA 356 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTC---EECCCCBSS---EEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCC---EecCCCeeE---EEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCc
Confidence 35677788888888888887 432 211223466 8888886511135778999886 679999763
Q ss_pred ----------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 ----------SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ----------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+.+++|+++. .+++++++++++|.+++++.
T Consensus 357 ~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 357 AGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp --------CCGGGCEEEECC--SCHHHHHHHHHHHGGGGC--
T ss_pred cccccccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHhcc
Confidence 2468999964 58999999999999877654
No 76
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.92 E-value=4e-26 Score=199.17 Aligned_cols=236 Identities=14% Similarity=0.138 Sum_probs=174.1
Q ss_pred cCCCCCCceeecC-----------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 13 FGPHMPGYNIIPY-----------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 13 ~~~~~~~v~~~~~-----------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
+...+.+++.+++ .|+++|++.+++ ++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||
T Consensus 143 ~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De 219 (407)
T 3nra_A 143 VEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA--GARVFLFSNPNNPAGVV-YSAEEIGQIAALAARYGATVIADQ 219 (407)
T ss_dssp HHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT--TCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh--CCcEEEEcCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEc
Confidence 3445677778876 289999999954 56777777678888876 899999999999999999999999
Q ss_pred cccCcCCcCccc-cccc-----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHH
Q psy6547 82 VQTGLGRTGKLL-AIHY-----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTAL 154 (266)
Q Consensus 82 ~~~~~~~~g~~~-~~~~-----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 154 (266)
+|+++...|..+ .+.. .+..+.+.++||+++ +| +|+||+++++++.+.+.......++++++++++++..++
T Consensus 220 a~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l 298 (407)
T 3nra_A 220 LYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWF 298 (407)
T ss_dssp TTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTT
T ss_pred cccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHH
Confidence 998875555422 2222 223455667999999 88 999999999998888775555566677888887777666
Q ss_pred HHHh--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccC--
Q psy6547 155 DVIL--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPI-- 229 (266)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~-- 229 (266)
+... -++..++++++++++++.|++ ++ .+.......|. ++++.++.. +.+..+++++|++ +||.+.++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~ 371 (407)
T 3nra_A 299 DEAPGWMEDRIARHQAIRDELLHVLRG-CE--GVFARTPQAGS---YLFPRLPKL-AVAPAEFVKILRLQAGVVVTPGTE 371 (407)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHT-ST--TCBCCCCSBSS---EECCBCCCB-SSCHHHHHHHHHHHHCEECEEGGG
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc-CC--CceeccCCeeE---EEEEeCCCC-CCCHHHHHHHHHHhCCEEEeCchh
Confidence 4211 134566777788888888877 42 22221223356 788777641 3467889999975 59999864
Q ss_pred ----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 ----SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
..+++|++++ .+++++++++++|.++++++
T Consensus 372 ~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 372 FSPHTADSVRLNFS--QDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp TCTTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 3589999976 49999999999999998765
No 77
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.92 E-value=9.8e-26 Score=194.56 Aligned_cols=225 Identities=17% Similarity=0.165 Sum_probs=170.2
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL 92 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~ 92 (266)
+...+.+++.++ .|+++|++.++ +++++|++++++|++|.+ ++.+ |.++|++||+++|+||+|+++...|..
T Consensus 130 ~~~~g~~~~~v~-~d~~~l~~~l~--~~~~~v~~~~p~nptG~~-~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~ 201 (370)
T 2z61_A 130 IRFLGAKPVFCD-FTVESLEEALS--DKTKAIIINSPSNPLGEV-IDRE----IYEFAYENIPYIISDEIYNGLVYEGKC 201 (370)
T ss_dssp HHHTTCEEEEEC-SSHHHHHHHCC--SSEEEEEEESSCTTTCCC-CCHH----HHHHHHHHCSEEEEECTTTTCBSSSCC
T ss_pred HHHcCCEEEEeC-CCHHHHHHhcc--cCceEEEEcCCCCCcCcc-cCHH----HHHHHHHcCCEEEEEcchhhcccCCCC
Confidence 334567788888 79999999994 468888888888888887 4444 999999999999999999877554432
Q ss_pred ccccc----CCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH-Hhh--ccHHH
Q psy6547 93 LAIHY----EDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV-ILE--ENMIE 164 (266)
Q Consensus 93 ~~~~~----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~--~~~~~ 164 (266)
..... .+.+..+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++.++|+. ... +++.+
T Consensus 202 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 280 (370)
T 2z61_A 202 YSAIEFDENLEKTILINGFSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIK 280 (370)
T ss_dssp CCGGGTCTTCSSEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHH
T ss_pred cCHHHccCCCCcEEEEecChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHH
Confidence 22222 233445666999998 88 89999999999888776544555677889999888888865 222 45677
Q ss_pred HHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC------CCCEEEEe
Q psy6547 165 NAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI------SNNIIRLS 237 (266)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~iR~~ 237 (266)
+++++++++.+.|++ ++.... ....|. ++|+.++. +..+++++|. ++||.+.++ +.+++|++
T Consensus 281 ~~~~~~~~l~~~L~~-~g~~~~---~~~~~~---~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~ 349 (370)
T 2z61_A 281 EFDRRRRLVLKYVKD-FGWEVN---NPIGAY---YVFPNIGE----DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRIS 349 (370)
T ss_dssp HHHHHHHHHHHHHHH-TTCBCC---CCCBTT---EECCBCSS----CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEE
T ss_pred HHHHHHHHHHHHHHH-cCCeec---CCCcce---EEEEecCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE
Confidence 888889999999887 432221 223466 67777754 5778999997 789999875 26799999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q psy6547 238 PALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 238 ~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
++ ++++++++++++|.++++
T Consensus 350 ~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 350 YA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CC--SCHHHHHHHHHHHHHHHC
T ss_pred Ee--CCHHHHHHHHHHHHHHHh
Confidence 77 699999999999998764
No 78
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.92 E-value=7e-25 Score=192.37 Aligned_cols=221 Identities=19% Similarity=0.171 Sum_probs=167.3
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcc-cccccC----CCC
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYE----DVR 101 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~-~~~~~~----~~~ 101 (266)
|+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++.+.|.. ..+... +..
T Consensus 163 d~~~l~~~~--~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (422)
T 3fvs_A 163 DPMELAGKF--TSRTKALVLNTPNNPLGKV-FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT 239 (422)
T ss_dssp CHHHHHTTC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CHHHHHhhc--CCCceEEEECCCCCCCCcC-CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcE
Confidence 789999988 4578999988888888887 79999999999999999999999999887655532 122222 233
Q ss_pred cCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHH-------hh--ccHHHHHHHHHH
Q psy6547 102 PDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI-------LE--ENMIENAYKMGE 171 (266)
Q Consensus 102 ~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~--~~~~~~~~~~~~ 171 (266)
+.+.++||.++ +| +|+||+++++++++.+.......+++.+++.+.++..+++.. .. +++.++++++++
T Consensus 240 i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (422)
T 3fvs_A 240 LTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRD 318 (422)
T ss_dssp EEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHH
T ss_pred EEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHH
Confidence 55667999998 88 999999999998887765556678888999999999888751 11 346677788888
Q ss_pred HHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc-cch----------HHHHHHHHH-HCCceeccC----------
Q psy6547 172 IFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA-ILE----------VYDVCIKMK-DAGLVTKPI---------- 229 (266)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~----------~~~~~~~l~-~~gi~~~~~---------- 229 (266)
++.+.|++ ++ +....+..|. ++|+.+.... ... ..+++.+|+ ++||.+.++
T Consensus 319 ~l~~~L~~-~g---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~ 391 (422)
T 3fvs_A 319 HMIRSLQS-VG---LKPIIPQGSY---FLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQK 391 (422)
T ss_dssp HHHHHHHT-TT---CEEEBCSBSS---EEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHT
T ss_pred HHHHHHHH-cC---CeecCCCeee---EEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCC
Confidence 88888887 42 3321334567 8888875410 000 557888865 579998873
Q ss_pred -CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 230 -SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 230 -~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+.+++|+++. .+++++++++++|++++++
T Consensus 392 ~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 392 HFDHYIRFCFV--KDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp TSCSEEEEECC--CCHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHhh
Confidence 2589999954 5999999999999998764
No 79
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.92 E-value=1.2e-25 Score=195.62 Aligned_cols=229 Identities=14% Similarity=0.020 Sum_probs=172.6
Q ss_pred cCCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 13 FGPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 13 ~~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+...+.+++.++.+ |+++|++.+++ ++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++
T Consensus 137 ~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~--~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~ 213 (396)
T 3jtx_A 137 TLLGGGEIHFANCPAPSFNPDWRSISEEVWK--RTKLVFVCSPNNPSGSV-LDLDGWKEVFDLQDKYGFIIASDECYSEI 213 (396)
T ss_dssp HHHTTCEEEEEECCTTTCCCCGGGSCHHHHH--TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEECTTTTC
T ss_pred HHHcCCEEEEeecCCCCCccCHHHHHHhhcc--CcEEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 34456777787753 78899998854 68888887778888876 89999999999999999999999999887
Q ss_pred CCcC-cccccc--------cCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHH
Q psy6547 87 GRTG-KLLAIH--------YEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV 156 (266)
Q Consensus 87 ~~~g-~~~~~~--------~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 156 (266)
...| .+.... ..+..+.+.++||.++ +| +|+||+++++++.+.+.......+++.+++++.++.++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (396)
T 3jtx_A 214 YFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDD 292 (396)
T ss_dssp CSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC
T ss_pred ccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC
Confidence 6655 222211 1455677788999987 78 99999999999888877555566778899999998888863
Q ss_pred Hh-hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC-----
Q psy6547 157 IL-EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI----- 229 (266)
Q Consensus 157 ~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~----- 229 (266)
.+ -++..++++++.+.+.+.|++ . +.......|. ++|+.++. .+..+++++|. ++||.+.|+
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~l~~-~----~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~ 361 (396)
T 3jtx_A 293 EQHVIDNRRLYQEKFERVIPILQQ-V----FDVKLPDASF---YIWLKVPD---GDDLAFARNLWQKAAIQVLPGRFLAR 361 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT-T----SCCCCCSSSS---EEEEECTT---SCHHHHHHHHHHHHCEECEEGGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-c----CCccCCCeeE---EEEEECCC---CCHHHHHHHHHHHCCEEEeCChHhCC
Confidence 11 134566677777777777776 2 1111233467 88888865 35778999985 569999764
Q ss_pred -------CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 230 -------SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 230 -------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+.+++|++++ .+++++++++++|.+++
T Consensus 362 ~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 362 DTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp CCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred cccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 2489999965 49999999999998864
No 80
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.92 E-value=3.2e-25 Score=192.10 Aligned_cols=228 Identities=18% Similarity=0.211 Sum_probs=172.8
Q ss_pred CCCCCCceeecCC--------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 14 GPHMPGYNIIPYN--------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 14 ~~~~~~v~~~~~~--------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
...+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|++
T Consensus 120 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 196 (381)
T 1v2d_A 120 FLAGAKARLVRLDLTPEGFRLDLSALEKAL--TPRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDE 196 (381)
T ss_dssp HHTTCEEEEEECEEETTEEECCHHHHHTTC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHcCCEEEEEeCCCCCccCCcCHHHHHHhc--CcCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCccc
Confidence 3345677777753 799999988 4568999988888888877 7899999999999999999999999987
Q ss_pred cCCcCc-ccccc--cCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--h
Q psy6547 86 LGRTGK-LLAIH--YEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--E 159 (266)
Q Consensus 86 ~~~~g~-~~~~~--~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~ 159 (266)
+.. |. ...+. ..+.++.+.++||+++ +| +|+||+++++++.+.+.......+++.+++.+.++.++|+... .
T Consensus 197 ~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 274 (381)
T 1v2d_A 197 LYY-GERPRRLREFAPERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREG 274 (381)
T ss_dssp CBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTT
T ss_pred ccc-CCCCCCHHHhcCCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHH
Confidence 643 32 11111 3466777888999998 78 9999999998888777644444567788889988888888652 2
Q ss_pred --ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC--------
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI-------- 229 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------- 229 (266)
+++.++++++++++.+.|++ .+. .......|. ++++.++. . + +...|.++||.+.++
T Consensus 275 ~~~~~~~~~~~~~~~l~~~L~~-~g~---~~~~~~~~~---~~~~~~~~--~-~---~~~~l~~~gi~v~~g~~~~~~~~ 341 (381)
T 1v2d_A 275 FYEALREGYRRRRDLLAGGLRA-MGL---RVYVPEGTY---FLMAELPG--W-D---AFRLVEEARVALIPASAFYLEDP 341 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTC---CEECCSBSS---EEEEECTT--C-C---HHHHHHHTCEECEEGGGGCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-CCC---EecCCCcce---EEEEecCh--H-h---HHHHHHhCCEEEecchHhCCCCC
Confidence 35677888888888888887 432 221122366 88888765 2 2 667778999999864
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
..+++|++++. +++++++++++|.+++++.
T Consensus 342 ~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 342 PKDLFRFAFCK--TEEELHLALERLGRVVNSP 371 (381)
T ss_dssp CTTEEEEECCS--CHHHHHHHHHHHHHHC---
T ss_pred CCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 35799999764 9999999999999988764
No 81
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=1.1e-25 Score=194.39 Aligned_cols=226 Identities=13% Similarity=0.043 Sum_probs=169.7
Q ss_pred cCCCCCCceeecCCCHH----HHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 13 FGPHMPGYNIIPYNDVD----ALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~----~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
+...+.+++.++.++.+ ++++.+.. ++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++..
T Consensus 125 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 201 (376)
T 3ezs_A 125 AKFIKAKSLLMPLTKENDFTPSLNEKELQ--EVDLVILNSPNNPTGRT-LSLEELISWVKLALKHDFILINDECYSEIYE 201 (376)
T ss_dssp HHHTTCEEEEEECCGGGTSCCCCCHHHHH--HCSEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBS
T ss_pred HHHcCCEEEEcccCCCCCcchhHHhhhcc--CCCEEEEcCCCCCcCCC-CCHHHHHHHHHHHHHcCcEEEEEccchhhcc
Confidence 44556778888765332 56666643 56788887778888876 8999999999999999999999999988765
Q ss_pred cCcccccc---------cCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q psy6547 89 TGKLLAIH---------YEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL 158 (266)
Q Consensus 89 ~g~~~~~~---------~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 158 (266)
.+...... ..+..+.+.++||+++ +| +|+||+++++++.+.+.......+++.+++++.++.++++..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 280 (376)
T 3ezs_A 202 NTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDR 280 (376)
T ss_dssp SSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSH
T ss_pred CCCCCCHHHccccccccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcH
Confidence 55332221 3455667778999997 88 9999999999998888765666778889999999888886421
Q ss_pred h-ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccC-------
Q psy6547 159 E-ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPI------- 229 (266)
Q Consensus 159 ~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~------- 229 (266)
. ++..++++++++.+.+.|+ .+. .+..|. ++|+.++ +..+++++|.+ +||.+.++
T Consensus 281 ~~~~~~~~~~~~~~~l~~~l~------~~~--~~~~~~---~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~ 344 (376)
T 3ezs_A 281 HAEFFRNIYANNLKLARKIFK------NTL--IYPYSF---YVYLPVQ-----NGENFAKTLYQNEGIITLPALYLGRNR 344 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHST------TCC--CCSBSS---EEEEECS-----CHHHHHHHHHHHHCCBCEEGGGGCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhc------CCC--CCCcce---EEEEECC-----CHHHHHHHHHHhCCEEEeCcHHhCCCC
Confidence 1 2345555566666666554 121 334577 8888876 36789999987 89999863
Q ss_pred -CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 230 -SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 230 -~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
..+++|++++ .+++++++++++|++++++
T Consensus 345 ~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 345 IGADYVRLALV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp TTTTEEEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence 4589999965 4999999999999998764
No 82
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.92 E-value=2.5e-25 Score=195.51 Aligned_cols=240 Identities=15% Similarity=0.095 Sum_probs=174.4
Q ss_pred CCCCCCceeecC----CCHHHHHHHHhcCCCEEEEEEcc-ccCCCCcccCChHHHHHHHHHHH-hcCCEEEEeccccC--
Q psy6547 14 GPHMPGYNIIPY----NDVDALEAKLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCS-QYNVLFIADEVQTG-- 85 (266)
Q Consensus 14 ~~~~~~v~~~~~----~d~~~l~~~l~~~~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~~-~~g~~li~De~~~~-- 85 (266)
...+.+++.++. .|+++|++.+++ .++++|++.+ ++|++|.+ ++.+.+++|+++|+ +||+++|+||+|..
T Consensus 149 ~~~g~~~~~v~~~~~g~d~~~l~~~l~~-~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 149 EHFGFEMINVPMTDEGPDMGVVRELVKD-PQVKGMWTVPVFGNPTGVT-FSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp HHHTCEEEEEEEETTEECHHHHHHHHTS-TTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred HHcCCEEEecCCCCCCCCHHHHHHHHhc-CCCeEEEEcCCCCCCCCCC-CCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 334667777775 379999999943 2688888555 57777765 89999999999999 99999999999964
Q ss_pred cCCcCcc-ccc-------ccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHH
Q psy6547 86 LGRTGKL-LAI-------HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 86 ~~~~g~~-~~~-------~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
|...+.. ..+ +..+..+.+.+|||+..+| +|+||+++++++++.+.......+++.+++++.++..+|+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~ 305 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDV 305 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSH
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCc
Confidence 5433321 122 2344566777899996689 999999999998887775545556778899998888887541
Q ss_pred h---h--ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC--
Q psy6547 158 L---E--ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI-- 229 (266)
Q Consensus 158 ~---~--~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-- 229 (266)
. . +...+.++++++.+.+.|.+.+.. ..+....+..|+ ++|+.++. . +..++.+.|.++||.++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~---~~~~~~~~--~-~~~~~~~~l~~~gV~v~~~g~ 379 (422)
T 3d6k_A 306 AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGY---FISVDVVP--G-TASRVVELAKEAGIALTGAGS 379 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSS---CEEEEEST--T-CHHHHHHHHHHTTEECCCTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcce---EEEEECCC--C-CHHHHHHHHHHCCeEEEcCcc
Confidence 1 1 234455556666666666652322 112211234577 89999876 2 5677888899999999883
Q ss_pred --------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 230 --------SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 230 --------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
..+++|++++. ++++++++++++|++++++...
T Consensus 380 ~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 380 SFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp TSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 14789999776 7999999999999999987644
No 83
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.92 E-value=1.2e-24 Score=189.61 Aligned_cols=238 Identities=13% Similarity=0.085 Sum_probs=171.6
Q ss_pred CCCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 14 GPHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 14 ~~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
...+.+++.++. .|+++|++.+++ +++++|+++.++|++|.+ ++.+.+++|+++|++||+++|+||+|++
T Consensus 131 ~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (399)
T 1c7n_A 131 KNQERKIIECELLEKDGYYTIDFQKLEKLSKD-KNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFD 208 (399)
T ss_dssp HTTTCEEEECCCEEETTEEECCHHHHHHHHTC-TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTT
T ss_pred HHcCCEEEecccccCCCCEEEcHHHHHHHhcc-CCCcEEEEcCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 345667777765 479999999942 468888887788888876 8999999999999999999999999988
Q ss_pred cCCcCcc-ccccc-----CCCCcCeeeeccccc-CCchhhhhheec-HHhhhccCCCCCCCCC-CCcHHHHHHHHHHHHH
Q psy6547 86 LGRTGKL-LAIHY-----EDVRPDIVILGKALS-GGLYPISAVLAD-DEVMGTLVPGTHGSTY-GGNPLACKLAMTALDV 156 (266)
Q Consensus 86 ~~~~g~~-~~~~~-----~~~~~d~~~~sK~~~-~g~~~~g~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~ 156 (266)
+.+.|.. ..+.. .+..+.+.++||+++ +| +|+||++++ +++.+.+.......++ +.+++++.++.++++.
T Consensus 209 ~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 209 LIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp CBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred cccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 7654532 22222 233445667999999 88 899999986 5677776543333333 5788899888888864
Q ss_pred Hh--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC---
Q psy6547 157 IL--EENMIENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI--- 229 (266)
Q Consensus 157 ~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~--- 229 (266)
.. -+...++++++++++.+.|++.++ .+.. ..+ .+. ++|+.++.. +.+..+++++|+ ++||.+.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~-~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~ 360 (399)
T 1c7n_A 288 CGKWLDGCIKVIDKNQRIVKDFFEVNHP--EIKA-PLIEGTY---LQWIDFRAL-KMDHKAMEEFMIHKAQIFFDEGYIF 360 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCT--TSBC-CCCSBSS---EEEEECGGG-CCCHHHHHHHHHHTTCCCCEEGGGG
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhCC--CCeE-ecCCceE---EEEEEcccC-CCCHHHHHHHHHHhCCEEEeCcccc
Confidence 21 134566677778888887775221 2322 222 344 557887641 146788999997 689999875
Q ss_pred ---CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 230 ---SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 230 ---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
..+++|++++. +++++++++++|.++++++..
T Consensus 361 ~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 361 GDGGIGFERINLAA--PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp CGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHHHHh
Confidence 35799999664 589999999999999987643
No 84
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.92 E-value=5.4e-25 Score=191.62 Aligned_cols=232 Identities=17% Similarity=0.180 Sum_probs=173.9
Q ss_pred cccCCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHh------cCCEEE
Q psy6547 11 NEFGPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ------YNVLFI 78 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~------~g~~li 78 (266)
..+...+.+++.++.+ |+++|++++ .+++++++++.++|++|.+ ++.+.+++|+++|++ ||+++|
T Consensus 139 ~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li 215 (398)
T 3ele_A 139 VFVNAAGARLVEVPADTEHFQIDFDALEERI--NAHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFII 215 (398)
T ss_dssp HHHHHTTCEEEEECCCTTTSSCCHHHHHHTC--CTTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred HHHHHcCCEEEEEecCCcCCcCCHHHHHHHh--CcCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEE
Confidence 3345567788888865 789999999 4478999988888888876 899999999999999 999999
Q ss_pred EeccccCcCCcCccc--ccccCCCCcCeeeeccccc-CCchhhhhheecHHhhh------ccCCC-CCCCCCCCcHHHHH
Q psy6547 79 ADEVQTGLGRTGKLL--AIHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMG------TLVPG-THGSTYGGNPLACK 148 (266)
Q Consensus 79 ~De~~~~~~~~g~~~--~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~ 148 (266)
+||+|+++...|... .....+..+.+.++||+++ +| +|+||+++++++.+ .+... ....+++.+++.+.
T Consensus 216 ~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (398)
T 3ele_A 216 ADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQK 294 (398)
T ss_dssp EECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHH
T ss_pred EeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHH
Confidence 999998876555322 2233445566677999999 99 99999999887433 11111 12235566777777
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc
Q psy6547 149 LAMTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP 228 (266)
Q Consensus 149 a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 228 (266)
++..+++ .....++++++++++.+.|++ ++ +.......|. ++|+.++. .+..++++.|.++||.+.+
T Consensus 295 a~~~~l~---~~~~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~gi~v~~ 361 (398)
T 3ele_A 295 MIVKCQG---ATGDINAYKENRDLLYEGLTR-IG---YHCFKPDGAF---YMFVKALE---DDSNAFCEKAKEEDVLIVA 361 (398)
T ss_dssp HHTTCTT---CCCCHHHHHHHHHHHHHHHHH-HT---CCEECCSBSS---EEEEECSS---SCHHHHHHHHHTTTEECEE
T ss_pred HHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cC---CeecCCCeeE---EEEEEcCC---CCHHHHHHHHHHCCEEEeC
Confidence 7665553 344678888999999999988 53 2221223355 68888765 2578899999999999987
Q ss_pred CC----CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 229 IS----NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 229 ~~----~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+. .+++|++++ ++++++++++++|.++++++
T Consensus 362 g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 362 ADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp SGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 63 689999964 79999999999999998765
No 85
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=9.2e-25 Score=192.94 Aligned_cols=243 Identities=16% Similarity=0.169 Sum_probs=175.3
Q ss_pred cCCCCCCceeecC----------CCHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 13 FGPHMPGYNIIPY----------NDVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 13 ~~~~~~~v~~~~~----------~d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
+...+..++.++. .|+++|++++++ .+++++|+++.++|++|.+ ++.+.+++|+++|++||+++|+||
T Consensus 168 ~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De 246 (444)
T 3if2_A 168 FAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNV-LTDEEMAHLAEIAKRYDIPLIIDN 246 (444)
T ss_dssp EEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCc-CCHHHHHHHHHHHHHCCCEEEEEC
Confidence 3345666777662 389999998543 5678999987778888876 899999999999999999999999
Q ss_pred cccCcCCcCccc---ccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q psy6547 82 VQTGLGRTGKLL---AIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL 158 (266)
Q Consensus 82 ~~~~~~~~g~~~---~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 158 (266)
+|..+. .+..+ .....+..+++.++||...+| +|+||+++++++.+.+....+..+++++++.+.++...++...
T Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 324 (444)
T 3if2_A 247 AYGMPF-PNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDR 324 (444)
T ss_dssp TTCTTT-TCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSH
T ss_pred CCCCcc-cccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCc
Confidence 996431 11111 111234556677899986688 9999999999988887765555667778888888877776422
Q ss_pred h-----ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC---
Q psy6547 159 E-----ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--- 230 (266)
Q Consensus 159 ~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--- 230 (266)
. +.+.++++++.+.+.+.|.+.+....+....+..|. ++|+.++.. +.+..++++.|.++||.+.++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~---~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~~~ 400 (444)
T 3if2_A 325 IKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAI---FLWLWFKDL-PISTLDLYERLKAKGTLIVPSEYFF 400 (444)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSS---EEEEEETTC-SSCHHHHHHHHHHTTEECEEGGGSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccE---EEEEEcCCC-CCCHHHHHHHHHHCCeEEecchhhc
Confidence 1 124556666777777777663332222221234577 888888641 2468889999999999998741
Q ss_pred -----------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 231 -----------NNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 231 -----------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
.+++|++++. +++++++++++|.++++++.+.
T Consensus 401 ~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 401 PGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp TTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHHcc
Confidence 1589999775 9999999999999999887654
No 86
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=1.9e-24 Score=187.76 Aligned_cols=235 Identities=13% Similarity=0.096 Sum_probs=169.4
Q ss_pred CCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 15 PHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 15 ~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
..+.+++.++. .|+++|++.+++ .++++|+++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++
T Consensus 130 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~ 207 (390)
T 1d2f_A 130 GNQRTVMPVALEKQADGWFCDMGKLEAVLAK-PECKIMLLCSPQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHMDM 207 (390)
T ss_dssp HTTCEEEEEECEECSSSEECCHHHHHHHHTS-TTEEEEEEESSCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred HCCCEEEEeecccCCCccccCHHHHHHHhcc-CCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 34566777764 489999999953 268888877778888876 78899999999999999999999999887
Q ss_pred CCcCccc-ccccCCCC-cC-eeeeccccc-CCchhhhhheec-HHhhhccCCCCC-CCCC-CCcHHHHHHHHHHHHHHhh
Q psy6547 87 GRTGKLL-AIHYEDVR-PD-IVILGKALS-GGLYPISAVLAD-DEVMGTLVPGTH-GSTY-GGNPLACKLAMTALDVILE 159 (266)
Q Consensus 87 ~~~g~~~-~~~~~~~~-~d-~~~~sK~~~-~g~~~~g~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~a~~~~l~~~~~ 159 (266)
.+.|..+ ........ .| +.++||+++ +| +|+||++++ +++.+.+..... ..++ +.+++++.++.++++....
T Consensus 208 ~~~g~~~~~~~~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 286 (390)
T 1d2f_A 208 VWGEQPHIPWSNVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAP 286 (390)
T ss_dssp BCSSSCCCCGGGTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHH
T ss_pred ccCCCCCcCHHHcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHH
Confidence 6555422 22111111 02 778999998 88 899999985 677776654333 4454 6788888888888874221
Q ss_pred --ccHHHHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC------
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI------ 229 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------ 229 (266)
++..++++++++++.+.|++.++ .+.. ..+ .+. ++|+.++.. +.+..++++.|. ++||.+.++
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~-~~~~~~~---~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~f~~~ 359 (390)
T 1d2f_A 287 WLDALRIYLKDNLTYIADKMNAAFP--ELNW-QIPQSTY---LAWLDLRPL-NIDDNALQKALIEQEKVAIMPGYTYGEE 359 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCS--SCCC-CCCSBCS---EEEEECGGG-CCCHHHHHHHHHHTTCEECEEGGGGCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC--CCEE-ecCCccE---EEEEEcccc-CCCHHHHHHHHHHHcCEEeeCccccCCC
Confidence 34566777788888888876221 2222 222 345 567888651 146788999999 689999875
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
..+++|++++. +++++++++++|.+++++.
T Consensus 360 ~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 360 GRGFVRLNAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 25799999664 6899999999999998764
No 87
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.92 E-value=6.1e-25 Score=190.60 Aligned_cols=233 Identities=17% Similarity=0.111 Sum_probs=171.5
Q ss_pred cCCCCCCceeecCC---------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 13 FGPHMPGYNIIPYN---------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 13 ~~~~~~~v~~~~~~---------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+...+.+++.++.+ |+++|+++++ + ++++++++++|++|.+ ++.+++++|+++|++||+++|+||+|
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~-~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~ 206 (391)
T 4dq6_A 131 VKNNNRELIISPLQKLENGNYIMDYEDIENKIK--D-VKLFILCNPHNPVGRV-WTKDELKKLGDICLKHNVKIISDEIH 206 (391)
T ss_dssp HHHTTCEEEECCCEECTTSCEECCHHHHHHHCT--T-EEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh--c-CCEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEeeccc
Confidence 34456777877765 8999999994 3 8888888888888876 89999999999999999999999999
Q ss_pred cCcCCcCccc-ccccC-----CCCcCeeeeccccc-CCchhhhhheecH-HhhhccCCC-CCCCCCCCcHHHHHHHHHHH
Q psy6547 84 TGLGRTGKLL-AIHYE-----DVRPDIVILGKALS-GGLYPISAVLADD-EVMGTLVPG-THGSTYGGNPLACKLAMTAL 154 (266)
Q Consensus 84 ~~~~~~g~~~-~~~~~-----~~~~d~~~~sK~~~-~g~~~~g~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l 154 (266)
+++.+.|..+ .+... +..+.+.++||+++ +| +|+||++++. ++.+.+... ....++++++++++++.+++
T Consensus 207 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 285 (391)
T 4dq6_A 207 SDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASY 285 (391)
T ss_dssp TTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred cccccCCCCccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 8876555321 22221 22344667999998 88 9999998875 777766543 23456678899999888888
Q ss_pred HHHh--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccC--
Q psy6547 155 DVIL--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPI-- 229 (266)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~-- 229 (266)
+..+ -++..++++++++++.+.|++.+. .+.......+. ++|+.++.. +.+..+++++|.++ ||.++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~ 359 (391)
T 4dq6_A 286 NNGESWLESFLEYLESNIDFAIKYINENMP--KLKVRKPEGTY---LLWVDFSAL-GLSDEELESILVQKGKVALNQGNS 359 (391)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHCT--TSEECCCSBSS---EEEEECGGG-CCCHHHHHHHHHHTTCEECEEGGG
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhCC--CCEecCCCccE---EEEEEhhhc-CCCHHHHHHHHHHhCCEEeeCchh
Confidence 7532 234667777788888888776222 23221223344 566777641 24688999999998 9999874
Q ss_pred ----CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 230 ----SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 230 ----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+.+++|++++ ++++++++++++|++++
T Consensus 360 ~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 360 FGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 3489999966 69999999999999876
No 88
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.92 E-value=1.9e-25 Score=195.15 Aligned_cols=235 Identities=15% Similarity=0.074 Sum_probs=170.6
Q ss_pred CCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 15 PHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 15 ~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
..+.+++.++.+ |+++|++.++ +++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++.
T Consensus 144 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~ 220 (406)
T 1xi9_A 144 FYGGKPVEYRTIEEEDWQPDIDDIRKKIT--DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMT 220 (406)
T ss_dssp HTTCEEEEEEEEGGGTSEECHHHHHHHCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred HcCCEEEEeecCCCcCCcCCHHHHHHhhC--cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 345667776642 7999999994 468888888888888876 899999999999999999999999998875
Q ss_pred CcCcccccccC--CC-CcCeeeeccccc-CCchhhhhhe--ecH----HhhhccCCCCCCCCCCCcHHHHHHHHHHHHHH
Q psy6547 88 RTGKLLAIHYE--DV-RPDIVILGKALS-GGLYPISAVL--ADD----EVMGTLVPGTHGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 88 ~~g~~~~~~~~--~~-~~d~~~~sK~~~-~g~~~~g~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
..+....+..+ +. +..+.++||+++ +| +|+||++ +++ ++.+.+....... ++.+++.+.++.++|+..
T Consensus 221 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~ 298 (406)
T 1xi9_A 221 YEGEHISPGSLTKDVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGP 298 (406)
T ss_dssp SSSCCCCHHHHCSSSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSC
T ss_pred cCCCCCCHHHcCCCceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCC
Confidence 43322222222 22 223345899998 78 9999999 888 8877765432223 677888888888888532
Q ss_pred h--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccCC----
Q psy6547 158 L--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPIS---- 230 (266)
Q Consensus 158 ~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~---- 230 (266)
. -+++.++++++++++.+.|++ ++ .+.......|. ++++.++...+.+..+++++|. ++||.+.++.
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~L~~-~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~ 372 (406)
T 1xi9_A 299 MDYLKEYMKKLKERRDYIYKRLNE-IP--GISTTKPQGAF---YIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE 372 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHT-ST--TEECCCCCBSS---EECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh-CC--CCeeecCCeeE---EEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC
Confidence 2 145677888888899888887 52 12210122355 6666765310235788999987 8899998752
Q ss_pred --CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 --NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 --~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++|++++ ++++++++++++|.++++++.
T Consensus 373 ~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 373 YGAGHFRAVFL--PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp GGTTBEEEECC--SCHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEec--CCHHHHHHHHHHHHHHHHHHh
Confidence 579999976 899999999999999987753
No 89
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.92 E-value=6.6e-24 Score=184.84 Aligned_cols=230 Identities=17% Similarity=0.230 Sum_probs=174.7
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCC--CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc--CCc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRT 89 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~--~~~ 89 (266)
...+.+++.++.+|+++|++++++.+ ++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.+ +..
T Consensus 145 ~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~----~~~~l~~~~~~~~~~li~De~~~~~~~~~~ 220 (398)
T 3a2b_A 145 RLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIV----NLPELTSIANEFDAAVMVDDAHSLGVIGHK 220 (398)
T ss_dssp HHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBC----CHHHHHHHHHHHTCEEEEECTTTTTTSSGG
T ss_pred HHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCcc----CHHHHHHHHHHcCcEEEEECCCcccccCCC
Confidence 33567889999999999999996532 689999999999999885 6999999999999999999999643 222
Q ss_pred CcccccccCCCC--cCee--eecccccCCchhhhhheecHHhhhccCCC--CCCCCCCCcHHHHHHHHHHHHHHhh-ccH
Q psy6547 90 GKLLAIHYEDVR--PDIV--ILGKALSGGLYPISAVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILE-ENM 162 (266)
Q Consensus 90 g~~~~~~~~~~~--~d~~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~-~~~ 162 (266)
+..+ ...++.. +|++ ++||++++. .||+++++++++.+... ....+...++..++++.++|+.++. ++.
T Consensus 221 ~~~~-~~~~~~~~~~di~~~s~sK~~~~~---GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~ 296 (398)
T 3a2b_A 221 GAGT-ASHFGLNDDVDLIMGTFSKSLASL---GGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEH 296 (398)
T ss_dssp GCCH-HHHHTCGGGCSEEEEESSSTTCSS---CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHH
T ss_pred CCch-HhhcCCCcCCeEEEecccccccCC---CcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHH
Confidence 3322 2223332 4566 799999842 28899999888777542 1334445566666667778877543 468
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-------CCEEE
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------NNIIR 235 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~iR 235 (266)
.++++++++++.+.|++ ++... ..+.|. ++++.++. +.+..+++++|.++||.+.++. .+++|
T Consensus 297 ~~~~~~~~~~l~~~L~~-~g~~~----~~~~g~---~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iR 366 (398)
T 3a2b_A 297 IEKLWKNTDYAKAQLLD-HGFDL----GATESP---ILPIFIRS--NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIR 366 (398)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCB----CSCCSS---EEEEECCC--HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEE
T ss_pred HHHHHHHHHHHHHHHHh-cCCCc----CCCCCC---EEEEEcCC--HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEE
Confidence 88999999999999988 53222 223467 99999875 5578899999999999998752 47899
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 236 LSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++++..++++++++++++|+++++++
T Consensus 367 is~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 367 FSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 99888889999999999999998765
No 90
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=7.7e-25 Score=189.48 Aligned_cols=234 Identities=14% Similarity=0.143 Sum_probs=172.1
Q ss_pred cCCCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 13 FGPHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 13 ~~~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
+...+.+++.++. .|+++|++++ .++++++++++++|++|.+ ++.+.+++|+++|++||+++|+||+|+
T Consensus 123 ~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~ 199 (383)
T 3kax_A 123 VTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF--QQGVKLMLLCSPHNPIGRV-WKKEELTKLGSLCTKYNVIVVADEIHS 199 (383)
T ss_dssp HHHTTCEEEECCCEEETTEEECCHHHHHHHH--TTTCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHHcCCEEEeccceecCCcEEEcHHHHHHHh--CcCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 3445667777775 3899999999 4568888888888888876 899999999999999999999999998
Q ss_pred CcCCcCccc-cccc-----CCCCcCeeeeccccc-CCchhhhhhee-cHHhhhccCCCCC-CCCCCCcHHHHHHHHHHHH
Q psy6547 85 GLGRTGKLL-AIHY-----EDVRPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTH-GSTYGGNPLACKLAMTALD 155 (266)
Q Consensus 85 ~~~~~g~~~-~~~~-----~~~~~d~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~ 155 (266)
++.+.|..+ .+.. .+..+.+.++||.++ +| +|+||+++ ++++.+.+..... ...+++++++++++.++++
T Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 278 (383)
T 3kax_A 200 DIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYT 278 (383)
T ss_dssp TCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTT
T ss_pred ccccCCCCceeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHH
Confidence 876655321 1111 234456677999999 88 99999988 6777776654322 3445788999988888886
Q ss_pred HHh--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccC---
Q psy6547 156 VIL--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPI--- 229 (266)
Q Consensus 156 ~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~--- 229 (266)
... .++..++++++++++.+.|++.++ .+.......+. ++|+.++.. +.+..+++++|. ++||.++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~ 352 (383)
T 3kax_A 279 ECNDWLNEIRFYIEDNAKFACEYIKDHIP--TLSVMKPEGSF---LLWIDCSAL-NLSQDERTKLLEEKGKIIVEPGEKY 352 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHCT--TCEECCCSBSS---EEEEECGGG-CCCHHHHHHHHHHTSCEECEESGGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCC--CceEecCCceE---EEEEEcccc-CCCHHHHHHHHHhhCCEEeECchhh
Confidence 522 244667777888888888876222 22221122345 566777641 246889999998 689999874
Q ss_pred ---CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 230 ---SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 230 ---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+.+++|++++ .+++++++++++|.+++
T Consensus 353 ~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 353 GLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 2489999966 69999999999999875
No 91
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=4.2e-25 Score=193.28 Aligned_cols=232 Identities=14% Similarity=0.148 Sum_probs=171.7
Q ss_pred CCCCceeecCCC------HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 16 HMPGYNIIPYND------VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 16 ~~~~v~~~~~~d------~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
.+.+++.++.++ +++|++++ .+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++...
T Consensus 146 ~g~~~~~v~~~~~~~~~~~~~l~~~l--~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~ 222 (409)
T 2gb3_A 146 AGVKLIPVTRRMEEGFAIPQNLESFI--NERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR 222 (409)
T ss_dssp HTCEEEEEECCGGGTSCCCTTGGGGC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred cCCEEEEeccCCCCCCccHHHHHHhh--CcCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccC
Confidence 456777777653 67788887 3468989888888888876 78999999999999999999999999887554
Q ss_pred Cccccc-cc-CCCCcCeeeeccccc-CCchhhhhheecH-HhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--hccHH
Q psy6547 90 GKLLAI-HY-EDVRPDIVILGKALS-GGLYPISAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENMI 163 (266)
Q Consensus 90 g~~~~~-~~-~~~~~d~~~~sK~~~-~g~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~ 163 (266)
|..... .. .+.+..+.++||+++ +| +|+||+++++ ++.+.+.......+ +.+++.+.++.++|+... -+++.
T Consensus 223 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~ 300 (409)
T 2gb3_A 223 GEFASALSIESDKVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVR 300 (409)
T ss_dssp SCCCCGGGSCCTTEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCCCCccccCCCCEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHH
Confidence 432222 21 122233446899998 88 8999999988 88777664333333 778888888888885311 23467
Q ss_pred HHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC------CceeccC--------
Q psy6547 164 ENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA------GLVTKPI-------- 229 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~------gi~~~~~-------- 229 (266)
++++++++++.+.|++ ++..... .+..|. ++++.++. .+..+++++|.++ ||.+.++
T Consensus 301 ~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~~---~~~~~~~~---~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~ 371 (409)
T 2gb3_A 301 ETYRERVETVLKKLEE-HGLKRFT--KPSGAF---YITAELPV---EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPG 371 (409)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCCBC--CCSBSS---EEEEECSS---SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTT
T ss_pred HHHHHHHHHHHHHHHH-cCceeee--CCCeeE---EEEEEeCC---CCHHHHHHHHHhccccccCcEEEeCchHhCCCCC
Confidence 7788888889888887 4322201 223466 77777752 3678899999987 9999864
Q ss_pred -CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 230 -SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 230 -~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+.+++|++++ ++++++++++++|+++++++..
T Consensus 372 ~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 372 LGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp TTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhhh
Confidence 2579999977 8999999999999999988654
No 92
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.92 E-value=2.4e-25 Score=197.03 Aligned_cols=229 Identities=10% Similarity=0.056 Sum_probs=166.7
Q ss_pred ceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc-cccccc-
Q psy6547 20 YNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-LLAIHY- 97 (266)
Q Consensus 20 v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~-~~~~~~- 97 (266)
++.+++++.+.+...+++.+++++|++++++|++|.+ ++.+.+++|+++|++||+++|+||+|++|...|. ...+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~-~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 267 (449)
T 3qgu_A 189 IEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAA-ATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEI 267 (449)
T ss_dssp EEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGS
T ss_pred eEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhc
Confidence 7888876543443334333567888888888888876 8999999999999999999999999988765542 112222
Q ss_pred ---CCCCcCeeeeccccc-CCchhhhhheecHHhhhc--------cCCCCCCCCCCCcHHHHHHHHHHHHHHh---hccH
Q psy6547 98 ---EDVRPDIVILGKALS-GGLYPISAVLADDEVMGT--------LVPGTHGSTYGGNPLACKLAMTALDVIL---EENM 162 (266)
Q Consensus 98 ---~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~ 162 (266)
.+..+.+.++||+++ +| +|+||+++++++++. +.......+++++++++.++.++++... .+++
T Consensus 268 ~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 346 (449)
T 3qgu_A 268 PGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAM 346 (449)
T ss_dssp TTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHH
T ss_pred cCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHH
Confidence 234456777999999 89 999999998887652 2211233445788899998888886522 2457
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccC------CCCEEE
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPI------SNNIIR 235 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~------~~~~iR 235 (266)
.++++++++++++.|++ ++ +.......|. ++|+.++ +.+..+++++|+++ ||.+.|+ +.+++|
T Consensus 347 ~~~~~~~~~~l~~~L~~-~g---~~~~~~~~~~---~~~~~~~---~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR 416 (449)
T 3qgu_A 347 IKFYKENAQILKTTFTE-MG---FSVYGGDDAP---YIWVGFP---GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVR 416 (449)
T ss_dssp HHHHHHHHHHHHHHHHH-TT---CCEEESSSSS---EEEEECT---TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred HHHHHHHHHHHHHHHHH-CC---CeeeCCCCee---EEEEECC---CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence 78888899999999887 43 3321222466 8888886 24678899888875 9999875 358999
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 236 LSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
++ +..+++++++++++|++++++..
T Consensus 417 is--~~~~~e~i~~~l~~l~~~~~~~~ 441 (449)
T 3qgu_A 417 AS--AFGSRENILEAVRRFKEAYGKRN 441 (449)
T ss_dssp EE--CCSCHHHHHHHHHHHHHHHC---
T ss_pred EE--ecCCHHHHHHHHHHHHHHHHhcC
Confidence 99 55699999999999999886643
No 93
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.92 E-value=1.8e-24 Score=185.99 Aligned_cols=219 Identities=16% Similarity=0.139 Sum_probs=164.4
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|++++++.++ +++++++++++|++|.+ ++.+.+++|+++|+ +|+++|+||+|+++....
T Consensus 120 ~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~ 194 (356)
T 1fg7_A 120 IGVECRTVPTLDNWQLDLQGISDKLD---GVKVVYVCSPNNPTGQL-INPQDFRTLLELTR-GKAIVVADEAYIEFCPQA 194 (356)
T ss_dssp HTCEEEECCCCTTSCCCHHHHHTSCT---TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGG
T ss_pred cCCEEEEeeCCCCCCCCHHHHHHHhc---CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCCEEEEEccchhhcCCC
Confidence 3556666664 37889988883 68889988888888876 89999999999999 999999999998775222
Q ss_pred ccccc-ccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh---hccHHHH
Q psy6547 91 KLLAI-HYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---EENMIEN 165 (266)
Q Consensus 91 ~~~~~-~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~ 165 (266)
..... +.++....+.++||+++ +| +|+||+++++++.+.+.. ...+++.+++++.++.++++..+ -++..++
T Consensus 195 ~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 271 (356)
T 1fg7_A 195 SLAGWLAEYPHLAILRTLSKAFALAG-LRCGFTLANEEVINLLMK--VIAPYPLSTPVADIAAQALSPQGIVAMRERVAQ 271 (356)
T ss_dssp CSGGGTTTCTTEEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHH--HSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cHHHHHhhCCCEEEEecchHhhcCch-hhhEEEEeCHHHHHHHHH--hcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 22222 22344455667999998 88 999999999998877764 23455788999998888886543 2446677
Q ss_pred HHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc-CC----CCEEEEeccC
Q psy6547 166 AYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP-IS----NNIIRLSPAL 240 (266)
Q Consensus 166 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-~~----~~~iR~~~~~ 240 (266)
++++++++.+.|++ ++. .... .++.|+ ++++.++ +..+++++|.++||.+++ +. .+++|++++
T Consensus 272 ~~~~~~~l~~~L~~-~~~-~~~~-~~~~~~---~~~~~~~-----~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~- 339 (356)
T 1fg7_A 272 IIAEREYLIAALKE-IPC-VEQV-FDSETN---YILARFK-----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG- 339 (356)
T ss_dssp HHHHHHHHHHHHHH-STT-EEEE-CCCSSS---EEEEEET-----THHHHHHHHHHTTEECEECTTSTTCTTEEEEECC-
T ss_pred HHHHHHHHHHHHHh-CCC-ceEE-CCCCCe---EEEEECC-----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC-
Confidence 78888888888887 441 0111 234567 8888875 467899999999999998 42 369999954
Q ss_pred CCCHHHHHHHHHHHHH
Q psy6547 241 NITEQELREGLDIIIN 256 (266)
Q Consensus 241 ~~t~~~i~~~~~~l~~ 256 (266)
+++++++++++|++
T Consensus 340 --~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 340 --TREESQRVIDALRA 353 (356)
T ss_dssp --CHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHh
Confidence 68999999998875
No 94
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.91 E-value=1.8e-24 Score=189.03 Aligned_cols=230 Identities=19% Similarity=0.155 Sum_probs=170.9
Q ss_pred CCCCCCceeecCC----------------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEE
Q psy6547 14 GPHMPGYNIIPYN----------------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 14 ~~~~~~v~~~~~~----------------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
...+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+ ++.+++++|+++|++||+++
T Consensus 127 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~--~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~l 203 (410)
T 3e2y_A 127 RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKF--SSKTKAIILNTPHNPLGKV-YTRQELQVIADLCVKHDTLC 203 (410)
T ss_dssp HHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTC--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEE
T ss_pred HHcCCEEEEEeccccccccccccccCCcCCHHHHHhhc--CCCceEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHcCcEE
Confidence 3445666666653 889999998 4578999998888888877 79999999999999999999
Q ss_pred EEeccccCcCCcCccc-ccccC----CCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHH
Q psy6547 78 IADEVQTGLGRTGKLL-AIHYE----DVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAM 151 (266)
Q Consensus 78 i~De~~~~~~~~g~~~-~~~~~----~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 151 (266)
|+||+|+++.+.|..+ .+... +..+.+.++||.++ +| +|+||+++++++++.+.......+++.+++.+.++.
T Consensus 204 i~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 282 (410)
T 3e2y_A 204 ISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALA 282 (410)
T ss_dssp EEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred EEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHH
Confidence 9999998876555322 22222 23355667999999 88 999999999998888776556678888999999999
Q ss_pred HHHHHH-------h--hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc-c--------chHH
Q psy6547 152 TALDVI-------L--EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA-I--------LEVY 213 (266)
Q Consensus 152 ~~l~~~-------~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~--------~~~~ 213 (266)
.+++.. . -+++.++++++++++.+.|++ ++ +....+..|. ++|+.+.... . .+..
T Consensus 283 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 355 (410)
T 3e2y_A 283 EAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS-VG---LKPIVPDGGY---FIIADVSSLGADLSDMNSDEPYDY 355 (410)
T ss_dssp HHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT-TT---CEEEBCSBSS---EEEEECGGGCCCCTTCCSSCCHHH
T ss_pred HHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH-CC---CeecCCCccE---EEEEEchhhhcccccccccccCHH
Confidence 888741 1 134667777788888888887 42 3221334577 8888775411 1 1234
Q ss_pred HHHHHHH-HCCceeccCC-----------CCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 214 DVCIKMK-DAGLVTKPIS-----------NNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 214 ~~~~~l~-~~gi~~~~~~-----------~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
+++.+++ ++||.+.|+. .+++|++ +..+++++++++++|++
T Consensus 356 ~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis--~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 356 KFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFC--FIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEE--CCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEE--EcCCHHHHHHHHHHHHh
Confidence 7777664 6799998641 4799999 45699999999999975
No 95
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.91 E-value=1.2e-23 Score=182.35 Aligned_cols=234 Identities=14% Similarity=0.104 Sum_probs=172.3
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.++++ ++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++ +
T Consensus 120 ~g~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~De~~~-~g--~ 191 (393)
T 3kgw_A 120 IGARVHQMIKKPGEHYTLQEVEEGLAQH-KPVLLFLVHGESSTGVVQ----PLDGFGELCHRYQCLLLVDSVAS-LG--G 191 (393)
T ss_dssp TTCEEEEEECCTTCCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCTTHHHHHHHTTCEEEEECTTT-TT--T
T ss_pred cCCceEEEeCCCCCCCCHHHHHHHHhhC-CCcEEEEeccCCcchhhc----cHHHHHHHHHHcCCEEEEECCcc-cc--C
Confidence 3556666663 4899999999542 578999999999999885 58899999999999999999995 21 1
Q ss_pred cccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCC-----------------------CCCCCCCcHHHH
Q psy6547 91 KLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGT-----------------------HGSTYGGNPLAC 147 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 147 (266)
..+....++.+..+.++||+++++ .++|++++++++.+.+.... ....++.+..++
T Consensus 192 ~~~~~~~~~~d~~~~s~sK~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (393)
T 3kgw_A 192 VPIYMDQQGIDIMYSSSQKVLNAP-PGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSL 270 (393)
T ss_dssp SCCCTTTTTCCEEEEESSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHH
T ss_pred cccchhhcCCCEEEecCcccccCC-CceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHH
Confidence 222333344333344466999877 77999999998887764321 122345677788
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCC-cccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-
Q psy6547 148 KLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKA-SFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA- 222 (266)
Q Consensus 148 ~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 222 (266)
+++.++++.+.. +++.++++++++++.+.|++ ++.... +......+. ++++.++. +.+..++.++|.++
T Consensus 271 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~~ 344 (393)
T 3kgw_A 271 YCLRESLALIAEQGLENCWRRHREATAHLHKHLQE-MGLKFFVKDPEIRLPT---ITTVTVPA--GYNWRDIVSYVLDHF 344 (393)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCSS---EEEEECCT--TBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-cCCeeccCChhhcCCe---EEEEeCCC--CCCHHHHHHHHHHhC
Confidence 888888887655 45788899999999999998 543222 111122345 67788765 56788999999988
Q ss_pred CceeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 223 GLVTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 223 gi~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
||.++++ ..+++|+++ +...+++++++++++|+++++++..+
T Consensus 345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 345 SIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp CEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred CEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 9999975 468999997 66679999999999999999876443
No 96
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=4.1e-24 Score=185.20 Aligned_cols=227 Identities=18% Similarity=0.187 Sum_probs=174.9
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc--CCc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRT 89 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~--~~~ 89 (266)
+...+.+++.+|++|+++|++.+++.+ +++++++++++|++|.+. ++++|.++|++||+++|+||+|+.+ ++.
T Consensus 140 ~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~De~~~~~~~~~~ 215 (384)
T 1bs0_A 140 ASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSA----PLAEIQQVTQQHNGWLMVDDAHGTGVIGEQ 215 (384)
T ss_dssp HHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBC----CHHHHHHHHHHTTCEEEEECTTTTTTSSGG
T ss_pred HHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCcc----CHHHHHHHHHHcCcEEEEECCcccceecCC
Confidence 334577889999999999999997543 478888998999999886 5899999999999999999999532 223
Q ss_pred CcccccccCCCCcCee--eecccccCCchhhhhheecHHhhhccCCC--CCCCCCCCcHHHHHHHHHHHHHHhh---ccH
Q psy6547 90 GKLLAIHYEDVRPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILE---ENM 162 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~---~~~ 162 (266)
|..+. ..++..+|++ ++||++++ +.||+++++++.+.+... ....+.+.+++.++++.++++.+.. +++
T Consensus 216 ~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 291 (384)
T 1bs0_A 216 GRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDAR 291 (384)
T ss_dssp GCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHH
Confidence 33322 3345567777 69999983 348899998888776532 1223346788999999999988763 467
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-------CCEEE
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------NNIIR 235 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~iR 235 (266)
.++++++++++.+.|++ ++ +.. ..+.|. ++++.++. +.+..+++++|.++||.+.++. .+++|
T Consensus 292 ~~~~~~~~~~l~~~L~~-~g---~~~-~~~~~~---~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~R 361 (384)
T 1bs0_A 292 REKLAALITRFRAGVQD-LP---FTL-ADSCSA---IQPLIVGD--NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLR 361 (384)
T ss_dssp HHHHHHHHHHHHHHHTT-SS---CEE-CSCCSS---BCCEEEES--HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHh-cC---Ccc-cCCCCC---EEEEEeCC--HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEE
Confidence 88899999999999988 53 221 124566 88888875 4568899999999999998742 37899
Q ss_pred EeccCCCCHHHHHHHHHHHHHH
Q psy6547 236 LSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
++++..++++++++++++|+++
T Consensus 362 i~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 362 LTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHHHHHhh
Confidence 9999888999999999999864
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.91 E-value=1.1e-23 Score=183.72 Aligned_cols=229 Identities=14% Similarity=0.124 Sum_probs=171.4
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc--CcCCc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT--GLGRT 89 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~--~~~~~ 89 (266)
...+.+++.++++|+++|++++++. +++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ .+++.
T Consensus 150 ~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~~g~~~~~ 225 (401)
T 2bwn_A 150 KRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFG----PIKEICDIAEEFGALTYIDEVHAVGMYGPR 225 (401)
T ss_dssp HHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBC----CHHHHHHHHHHHTCEEEEECTTTTTTSSTT
T ss_pred HHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcC----CHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 3457789999999999999999642 3689999999999999886 58999999999999999999997 24555
Q ss_pred CcccccccCC----CCcCeeeecccccCCchhhhhheecHHhhhccCCCC--CCCCCCCcHHHHHHHHHHHHHHhh---c
Q psy6547 90 GKLLAIHYED----VRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE---E 160 (266)
Q Consensus 90 g~~~~~~~~~----~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~---~ 160 (266)
|..+. ...+ .++.+.++||++++. .||+++++++.+.+.... ...+.+.+++.++++.++++.++. +
T Consensus 226 g~~~~-~~~~~~~~~~i~~~s~sK~~~~~---GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 301 (401)
T 2bwn_A 226 GAGVA-ERDGLMHRIDIFNGTLAKAYGVF---GGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQ 301 (401)
T ss_dssp SCCHH-HHHTCGGGCSEEEEESSSTTCSC---CEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHH
T ss_pred Cceee-eccCccccCcEEEeechhhccCC---CCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccH
Confidence 54433 2223 244455799999832 377888887776654211 111223456788888889988765 3
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceeccCC-------CC
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKPIS-------NN 232 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~-------~~ 232 (266)
++.++++++++++.+.|++ ++.... ...+. ++++.++. +.+..+++++|. ++||.+.++. .+
T Consensus 302 ~~~~~~~~~~~~l~~~L~~-~g~~~~----~~~~~---~~~~~~~~--~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~ 371 (401)
T 2bwn_A 302 KLRDAQQMHAKVLKMRLKA-LGMPII----DHGSH---IVPVVIGD--PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTE 371 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTCCBC----CCSSS---CEEEECCC--HHHHHHHHHHHHHHHCEECCEECTTTSCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHH-CCCccc----CCCCC---eEEEEeCC--hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCc
Confidence 6788899999999999988 532222 12345 89998875 456788999996 7899997642 25
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++|++++..++++++++++++|++++++
T Consensus 372 ~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 372 RLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred eEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 8999999889999999999999998765
No 98
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=7.4e-23 Score=175.60 Aligned_cols=230 Identities=14% Similarity=0.156 Sum_probs=169.5
Q ss_pred CCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 17 MPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 17 ~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+.+++.++. .|+++|++++++++++++|++..++|++|.+. ++++|.++|++||+++|+||+|+ ++...
T Consensus 103 g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~-~~~~~- 176 (366)
T 1m32_A 103 GIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLN----PIDEVGALAHRYGKTYIVDAMSS-FGGIP- 176 (366)
T ss_dssp TCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEEC----CHHHHHHHHHHHTCEEEEECTTT-TTTSC-
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceec----CHHHHHHHHHHcCCEEEEECCcc-ccCcC-
Confidence 445666653 58999999997654578888888888889885 58999999999999999999995 32221
Q ss_pred ccccccCCCCcCee--eecccccCCchhhhhheecHHhhhccCCCCC------------------CCCCCCcHHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGTH------------------GSTYGGNPLACKLAM 151 (266)
Q Consensus 92 ~~~~~~~~~~~d~~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~a~~ 151 (266)
+....+ .+|++ ++||+++++ .++|++++++++.+.+..... ...++.++..++++.
T Consensus 177 -~~~~~~--~~di~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 252 (366)
T 1m32_A 177 -MDIAAL--HIDYLISSANKCIQGV-PGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFA 252 (366)
T ss_dssp -CCTTTT--TCSEEEEESSSTTCCC-SSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHH
T ss_pred -cccccc--CccEEEecCcccccCC-CceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHH
Confidence 222222 35555 478999766 667999999998877764211 113577888888888
Q ss_pred HHHHHHhhc----cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec
Q psy6547 152 TALDVILEE----NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK 227 (266)
Q Consensus 152 ~~l~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 227 (266)
++++.+... ++.++++++++++.+.|++ ++...........+. ++++.+++..+.+..+++++|.++||.+.
T Consensus 253 ~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~gi~v~ 328 (366)
T 1m32_A 253 QALKELAKEGGVAARHQRYQQNQRSLVAGMRA-LGFNTLLDDELHSPI---ITAFYSPEDPQYRFSEFYRRLKEQGFVIY 328 (366)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TTCCBSSCGGGBCSS---EEEEECCCCTTCCHHHHHHHHHHTTEECE
T ss_pred HHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-CCCeeccCchhcCce---EEEEEcCccCCCCHHHHHHHHHHCCEEEE
Confidence 888876543 4788888999999999988 542222110012466 88888763112467889999999999998
Q ss_pred cC---CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 228 PI---SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 228 ~~---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++ ..+++|++++..++++++++++++|++++++
T Consensus 329 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 329 PGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp ECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred CCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 76 4689999999888999999999999988654
No 99
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.91 E-value=2.9e-24 Score=188.08 Aligned_cols=236 Identities=13% Similarity=0.119 Sum_probs=171.0
Q ss_pred CCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 15 PHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 15 ~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
.....++.++.+ |+++|+ + .++++++++++++|++|.+ ++.+.+++|+++|++||+++|+||+|..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~d~~~l~--~--~~~~~~v~~~~p~NptG~~-~~~~~~~~l~~~a~~~~~~li~De~~~~~~- 226 (417)
T 3g7q_A 153 SARPNIELLPEGQFKYHVDFEHLH--I--GEETGMICVSRPTNPTGNV-ITDEELMKLDRLANQHNIPLVIDNAYGVPF- 226 (417)
T ss_dssp ECCCEEEEEGGGEEEEECCGGGCC--C--CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTCTTT-
T ss_pred cccCcccccCCcccccccCHHHhc--c--ccCceEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEeCCCcccc-
Confidence 344556666543 788887 4 4578999988888888876 899999999999999999999999996431
Q ss_pred cCccc-c--cccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh-----c
Q psy6547 89 TGKLL-A--IHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-----E 160 (266)
Q Consensus 89 ~g~~~-~--~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~ 160 (266)
.+..+ . ....+....+.++||...+| +|+||+++++++.+.+....+..+++++++.+.++...++...- +
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 305 (417)
T 3g7q_A 227 PGIIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSET 305 (417)
T ss_dssp TCCBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHH
Confidence 11111 1 11233445577799965588 99999999999988887655666777888888888877763211 1
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----------
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS---------- 230 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---------- 230 (266)
.+.++++++.+.+.+.|++.+....+....+..|. ++|+.++.. +.+..++++.|.++||.+.++.
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~---~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~ 381 (417)
T 3g7q_A 306 VIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAI---FLWLWFKDL-PITTELLYQRLKARGVLMVPGHYFFPGLDKPW 381 (417)
T ss_dssp THHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSS---EEEEECTTC-SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcce---EEEEEcCCC-CCCHHHHHHHHHHCCEEEECchhhCCCCcccc
Confidence 25556677777777777763333223321234577 888888641 2467899999999999998741
Q ss_pred ---CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 231 ---NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 231 ---~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.+++|++++. +++++++++++|.++++++.+
T Consensus 382 ~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 382 PHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp GGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHHh
Confidence 4699999764 999999999999999987653
No 100
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=1.4e-24 Score=186.86 Aligned_cols=225 Identities=16% Similarity=0.132 Sum_probs=170.0
Q ss_pred cCCCCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 13 FGPHMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 13 ~~~~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+...+.+++.++. .|+++|++.+ .+++++|+++.++|++|.+ ++.+.+++|+++| ++|+++|+||+|+++.
T Consensus 123 ~~~~g~~~~~v~~~~~~~~d~~~l~~~l--~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~-~~~~~li~De~~~~~~ 198 (365)
T 3get_A 123 AKQCGAKCYKTQSITHNLDEFKKLYETH--KDEIKLIFLCLPNNPLGEC-LDASEATEFIKGV-NEDCLVVIDAAYNEFA 198 (365)
T ss_dssp HHHHTCEEEECSSSSCCHHHHHHHHHHT--TTTEEEEEEESSCTTTCCC-CCHHHHHHHHHTS-CTTSEEEEECTTHHHH
T ss_pred HHHcCCEEEEEecCCCCCCCHHHHHHHh--CCCCCEEEEcCCCCCCCCC-cCHHHHHHHHHhC-CCCcEEEEeCccHHHh
Confidence 3345667778776 4688999998 3578999998888888887 7888888888888 6799999999997664
Q ss_pred C--cC-ccc-c---cccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q psy6547 88 R--TG-KLL-A---IHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE 159 (266)
Q Consensus 88 ~--~g-~~~-~---~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 159 (266)
. .+ ... . ....+....+.++||+++ +| +|+||+++++++.+.+... ..+++.+++++.++.++++..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 275 (365)
T 3get_A 199 SFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKL--RAPFNVSNLALKAAVAAMDDDEF 275 (365)
T ss_dssp HHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHH--SCTTCSCHHHHHHHHHHHTCHHH
T ss_pred cccCCcccccHhHHhccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHh--cCCCCcCHHHHHHHHHHhCCHHH
Confidence 1 22 111 1 122344455667999998 88 9999999999888777642 33466889999998888874321
Q ss_pred -ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC---CCEEE
Q psy6547 160 -ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS---NNIIR 235 (266)
Q Consensus 160 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---~~~iR 235 (266)
++..++++++++++.+.|++ ++ +.. ..+.|. ++++.++. . +..+++++|.++||.+.++. .+++|
T Consensus 276 ~~~~~~~~~~~~~~l~~~l~~-~g---~~~-~~~~~~---~~~~~~~~--~-~~~~~~~~l~~~gi~v~~g~~~~~~~iR 344 (365)
T 3get_A 276 TEKTLENNFSQMELYKEFAKK-HN---IKI-IDSYTN---FITYFFDE--K-NSTDLSEKLLKKGIIIRNLKSYGLNAIR 344 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT---CEE-CCCSSS---EEEEECSS--S-CHHHHHHHHHTTTEECEECGGGTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CC---CEE-CCCCCe---EEEEECCC--C-CHHHHHHHHHHCCEEEEECccCCCCEEE
Confidence 44677777888888888887 42 322 344577 88888876 3 68899999999999999875 68999
Q ss_pred EeccCCCCHHHHHHHHHHHHHHH
Q psy6547 236 LSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 236 ~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
++++ ++++++++++.|++++
T Consensus 345 is~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 345 ITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EECC---CHHHHHHHHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHHh
Confidence 9954 8999999999998875
No 101
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=1.4e-23 Score=181.02 Aligned_cols=223 Identities=13% Similarity=0.093 Sum_probs=167.4
Q ss_pred CCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 14 GPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 14 ~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
...+.+++.++.+ |+++|++.+++. ++++|++++++|++|.+. +++++.++|+.+++++|+||+|+++..
T Consensus 134 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~~~~l~~l~~~~~~~li~De~~~~~~~ 208 (369)
T 3cq5_A 134 KGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVT----SLDDVERIINVAPGIVIVDEAYAEFSP 208 (369)
T ss_dssp HHTTCEEEEEECCTTSSCCHHHHHHHHHHH-CCSEEEEESSCTTTCCCC----CHHHHHHHHHHCSSEEEEECTTGGGCC
T ss_pred HHcCCEEEEecCCcCCCCCHHHHHHHhhcc-CCCEEEEeCCCCCCCCCC----CHHHHHHHHHhCCCEEEEECCchhhcC
Confidence 3346677777743 689999999542 578888888889999875 556677777777899999999987753
Q ss_pred cCccccc-ccCC-CCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh-ccHHH
Q psy6547 89 TGKLLAI-HYED-VRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIE 164 (266)
Q Consensus 89 ~g~~~~~-~~~~-~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~ 164 (266)
....... +.++ ..+.+.++||+++ +| +|+||+++++++.+.+... ..+++.+++.+.++.++++..+. ++..+
T Consensus 209 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 285 (369)
T 3cq5_A 209 SPSATTLLEKYPTKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLV--RLPYHLSALSQAAAIVALRHSADTLGTVE 285 (369)
T ss_dssp SCCGGGGTTTCTTTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTT--SCTTCSCHHHHHHHHHHHHTHHHHHTHHH
T ss_pred CcchHHHHhhCCCCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHc--CCCCCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 2222221 2334 4466777999998 88 8999999999888877643 33567899999998888875321 45777
Q ss_pred HHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-CCEEEEeccCCCC
Q psy6547 165 NAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-NNIIRLSPALNIT 243 (266)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~iR~~~~~~~t 243 (266)
+++++++++.+.|++ .+ +.. .++.|. ++++.++. +..++.++|.++||.+.+++ .+++|++++ +
T Consensus 286 ~~~~~~~~l~~~L~~-~g---~~~-~~~~~~---~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~ 350 (369)
T 3cq5_A 286 KLSVERVRVAARLEE-LG---YAV-VPSESN---FVFFGDFS----DQHAAWQAFLDRGVLIRDVGIAGHLRTTIG---V 350 (369)
T ss_dssp HHHHHHHHHHHHHHH-HT---CEE-ECCSSS---EEEEECCS----SHHHHHHHHHHTTEECBCCSCTTEEEEECC---C
T ss_pred HHHHHHHHHHHHHHh-CC---CEE-CCCCCe---EEEEECCC----CHHHHHHHHHHCCEEEEECCCCCeEEEEeC---C
Confidence 888888888888887 43 332 334566 88887763 57789999999999999863 579999965 8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6547 244 EQELREGLDIIINTIN 259 (266)
Q Consensus 244 ~~~i~~~~~~l~~~~~ 259 (266)
++++++++++|+++++
T Consensus 351 ~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 351 PEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 102
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.91 E-value=1.9e-23 Score=182.31 Aligned_cols=233 Identities=13% Similarity=0.094 Sum_probs=173.8
Q ss_pred CCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 15 PHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 15 ~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
..+.+++.++.+ |+++|+++++++ ++++|++++++|++|.+. ++++|+++|++||+++|+||+|+ ++.
T Consensus 109 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~-~~~- 181 (411)
T 3nnk_A 109 RCRAEVHTIEVPWGEVFTPDQVEDAVKRI-RPRLLLTVQGDTSTTMLQ----PLAELGEICRRYDALFYTDATAS-LGG- 181 (411)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCTTHHHHHHHHTCEEEEECTTT-BTT-
T ss_pred HcCCeEEEEecCCCCCCCHHHHHHHHhhC-CCeEEEEeCCCCCcceec----cHHHHHHHHHHcCCEEEEECCcc-cCC-
Confidence 346678888766 899999999543 578999999999999885 58899999999999999999985 211
Q ss_pred CcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCC----------------------------------
Q psy6547 90 GKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGT---------------------------------- 135 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~---------------------------------- 135 (266)
..+....++.+..+.+++|+++++ .++|++++++++.+.+....
T Consensus 182 -~~~~~~~~~~d~~~~s~~K~l~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~ 259 (411)
T 3nnk_A 182 -NPLETDVWGLDAVSAGMQKCLGGP-SGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWG 259 (411)
T ss_dssp -BCCCTTTTTCSEEECCSTTTTCCC-SSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHS
T ss_pred -cccchhccCCcEEEecCccccCCC-CceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhc
Confidence 223333344444444577998877 78899999998876654321
Q ss_pred --CCCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccc
Q psy6547 136 --HGSTYGGNPLACKLAMTALDVILEE---NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAIL 210 (266)
Q Consensus 136 --~~~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (266)
.....+.+...++++.++++.+..+ ++.++++++++++.+.|++ ++...........+. ++++.+++ +.
T Consensus 260 ~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~---~~~~~~~~--~~ 333 (411)
T 3nnk_A 260 PERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA-MGLETFGDLKHKMNN---VLGVVIPQ--GI 333 (411)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBCSCGGGBCSS---EEEEECCT--TC
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-cCCEeCCCccccccc---EEEEECCC--CC
Confidence 1123456777788888888876653 5788889999999999988 543322221122456 88888875 55
Q ss_pred hHHHHHHHHHHC-CceeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 211 EVYDVCIKMKDA-GLVTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 211 ~~~~~~~~l~~~-gi~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+..+++++|.++ ||.++++ .++++|+++ +..++++++++++++|+++++++.
T Consensus 334 ~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 334 NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 788999999876 9999874 457999997 667799999999999999988753
No 103
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.91 E-value=3.9e-24 Score=187.53 Aligned_cols=235 Identities=11% Similarity=0.131 Sum_probs=170.0
Q ss_pred cccCCCCCCceeecC------CCHHHHHHHHhcC---CCEEEEEEccc-cCCCCcccCChHHHHHHHHHHH------hcC
Q psy6547 11 NEFGPHMPGYNIIPY------NDVDALEAKLKSN---PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCS------QYN 74 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~------~d~~~l~~~l~~~---~~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~------~~g 74 (266)
..+...+.+++.++. .|+++|++.+++. +..++++++++ +|++|.+ ++.+.+++|+++|+ +||
T Consensus 141 ~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~ 219 (418)
T 3rq1_A 141 VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS-IEDKDWDSILNFLKDLVAIGRNN 219 (418)
T ss_dssp HHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHTSSCE
T ss_pred HHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhhhccCCC
Confidence 334556777888874 2799999999642 34447777766 8888877 89999999999999 899
Q ss_pred CEEEEeccccCcCCcCc---ccccccCCCCcC---e--eeeccccc-CCchhhhhhee---cHHhhhccCCCCCC----C
Q psy6547 75 VLFIADEVQTGLGRTGK---LLAIHYEDVRPD---I--VILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG----S 138 (266)
Q Consensus 75 ~~li~De~~~~~~~~g~---~~~~~~~~~~~d---~--~~~sK~~~-~g~~~~g~~~~---~~~~~~~~~~~~~~----~ 138 (266)
+++|+||+|.+|...|. .+.....++.++ + .++||.++ +| +|+||+++ ++++.+.+...... .
T Consensus 220 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (418)
T 3rq1_A 220 VIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNKSTSRAT 298 (418)
T ss_dssp EEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 99999999988876553 122222344444 2 36999998 88 99999998 88888777643211 1
Q ss_pred CCCCcHHHHHHHHHHHHHH------hh--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccc
Q psy6547 139 TYGGNPLACKLAMTALDVI------LE--ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAIL 210 (266)
Q Consensus 139 ~~~~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (266)
....+.+++.++..+++.. .. ++++++++++++++.+.|++ ++.... ....|. ++|+.+.
T Consensus 299 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~---~~~~~~---~~~~~~~----- 366 (418)
T 3rq1_A 299 WSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQ-VGLPML---PYRGGF---FITIPTD----- 366 (418)
T ss_dssp TSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCCCC---CCCSSS---EEEEECT-----
T ss_pred cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCC---CCCceE---EEEcCCC-----
Confidence 2346778888877777432 11 24567778888888888887 543222 223455 5665542
Q ss_pred hHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 211 EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 211 ~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+..++++.|.++||.+.|+ .+++|+++. ..+++++++++++|+++++++
T Consensus 367 ~~~~~~~~l~~~gi~v~~g-~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 367 SANAICEELKKEHIYVIAL-ANGIRIAAC-GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp THHHHHHHHHHTTEECEEC-SSEEEEEGG-GSCHHHHTTHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCEEEecC-CCCeEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999997 678999955 469999999999999999875
No 104
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.91 E-value=1.3e-23 Score=180.51 Aligned_cols=228 Identities=13% Similarity=0.064 Sum_probs=168.5
Q ss_pred ccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 12 EFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
.+...+.+++.++.+ +++++++.++ + +++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~--~-~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~ 189 (361)
T 3ftb_A 114 NAKKHGVSVVFSYLDENMCIDYEDIISKID--D-VDSVIIGNPNNPNGGL-INKEKFIHVLKLAEEKKKTIIIDEAFIEF 189 (361)
T ss_dssp HHHHTTCEEEEEECCTTSCCCHHHHHHHTT--T-CSEEEEETTBTTTTBC-CCHHHHHHHHHHHHHHTCEEEEECSSGGG
T ss_pred HHHHcCCeEEEeecCcccCCCHHHHHHhcc--C-CCEEEEeCCCCCCCCC-CCHHHHHHHHHHhhhcCCEEEEECcchhh
Confidence 344456777777743 5689999994 3 7788877778888876 89999999999999999999999999877
Q ss_pred CCcCcccccccCCC---CcCeeeeccccc-CCchhhhhhe-ecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh-c
Q psy6547 87 GRTGKLLAIHYEDV---RPDIVILGKALS-GGLYPISAVL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-E 160 (266)
Q Consensus 87 ~~~g~~~~~~~~~~---~~d~~~~sK~~~-~g~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~ 160 (266)
...+........+. ...+.++||.++ +| +|+||++ .++++.+.+... ..+++.++++++++.++++..+. +
T Consensus 190 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (361)
T 3ftb_A 190 TGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKAK--QNPWNINCFAEMAAINCLKDTNYIE 266 (361)
T ss_dssp TCCTTSSSGGGTTTCSSEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHTT--SCTTCSCHHHHHHHHHTSSCHHHHH
T ss_pred cCCcccchhHhcccCCCEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCHHHHH
Confidence 54311111222222 233446999999 88 9999988 888888887753 34678899999998888864211 3
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCc-ccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC------CCE
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKAS-FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS------NNI 233 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~~~ 233 (266)
+..++++++++++.+.|++ ++ .+. . ..+.|. ++++.++. .+..++++.|.++||.++++. .++
T Consensus 267 ~~~~~~~~~~~~l~~~l~~-~~--~~~~~-~~~~~~---~~~~~~~~---~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~ 336 (361)
T 3ftb_A 267 ESLLWIKKERKRFIEELNK-IG--FIKRV-FSPHAN---FVLCRLEN---ISGEKLYDSLLKEDIVIRRCCNFIGLDDSF 336 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHH-SS--SEEEE-ECCSSS---EEEEEESS---SCHHHHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred HHHHHHHHHHHHHHHHHHh-CC--CCcee-cCCCCe---EEEEEcCC---CCHHHHHHHHHHCCeEEeeCccCCCCCCCE
Confidence 4666777778888888776 42 233 2 345677 88888765 367889999999999998752 589
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
+|++++ ++++++++++.|++..+
T Consensus 337 iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 337 VRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp EEEECC---CHHHHHHHHHHHHHHHH
T ss_pred EEEEcC---CHHHHHHHHHHHHHHHh
Confidence 999954 88888888888887764
No 105
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.91 E-value=4.1e-24 Score=184.10 Aligned_cols=227 Identities=14% Similarity=0.137 Sum_probs=162.3
Q ss_pred CCCCCceeecCCC------HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 15 PHMPGYNIIPYND------VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 15 ~~~~~v~~~~~~d------~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
..+.+++.++.+. ++++.+.+ .+++++++++.++|++|.+ ++.+++++|+++|++||+++|+||+|+++..
T Consensus 117 ~~g~~~~~v~~~~~~~~~~l~~~~~~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 193 (364)
T 1lc5_A 117 QSGCEIRRWSLREADGWQLTDAILEAL--TPDLDCLFLCTPNNPTGLL-PERPLLQAIADRCKSLNINLILDEAFIDFIP 193 (364)
T ss_dssp HTTCEEEEEECCGGGTTCCCTTHHHHC--CTTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGST
T ss_pred HcCCeEEEEeCCcccccchhHHHHHhc--cCCCCEEEEeCCCCCCCCC-CCHHHHHHHHHHhhhcCcEEEEECcChhhcc
Confidence 3466777777642 24344444 3456777765568888876 8999999999999999999999999987754
Q ss_pred cCcc-cc-cccCCCCcCeeeeccccc-CCchhhhhhe-ecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh-hccHH
Q psy6547 89 TGKL-LA-IHYEDVRPDIVILGKALS-GGLYPISAVL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EENMI 163 (266)
Q Consensus 89 ~g~~-~~-~~~~~~~~d~~~~sK~~~-~g~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~ 163 (266)
.+.. .. .+..+.++.+.++||+++ +| +|+||++ +++++.+.+... ..+++.+++++.++.++|+..+ -++..
T Consensus 194 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 270 (364)
T 1lc5_A 194 HETGFIPALKDNPHIWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQ--QMPWSVNALAALAGEVALQDSAWQQATW 270 (364)
T ss_dssp TCCCSGGGCTTCTTEEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHH--SCTTCSCHHHHHHHHHGGGCHHHHHHHH
T ss_pred CccchhhHhccCCCEEEEEECchhhcCCc-cceEEEEECCHHHHHHHHHh--CCCCCCCHHHHHHHHHHHhCcHHHHHHH
Confidence 3322 11 122344555667999998 89 9999999 899888776542 2367789999988888886421 13456
Q ss_pred HHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC------CCEEEEe
Q psy6547 164 ENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS------NNIIRLS 237 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~~~iR~~ 237 (266)
++++++++++.+.|++ ++ .+.. .++.|. ++++.++. +..+++++|.++||.+.++. .+++|++
T Consensus 271 ~~~~~~~~~l~~~L~~-~~--~~~~-~~~~g~---~~~~~~~~----~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis 339 (364)
T 1lc5_A 271 HWLREEGARFYQALCQ-LP--LLTV-YPGRAN---YLLLRCER----EDIDLQRRLLTQRILIRSCANYPGLDSRYYRVA 339 (364)
T ss_dssp HHHHHHHHHHHHHHHT-ST--TEEE-CCCSSS---EEEEEESC----TTCCHHHHHHTTTEECEECTTSTTCCTTEEEEE
T ss_pred HHHHHHHHHHHHHHhc-CC--CCEE-CCCCCe---EEEEECCC----cHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEE
Confidence 6677778888888876 42 2222 234567 88888765 34578999999999998752 5799999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 238 PALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 238 ~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+ .++++++++++.|+++++++
T Consensus 340 ~---~~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 340 I---RSAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp C---CCHHHHHHHHHHHHHHC---
T ss_pred e---CCHHHHHHHHHHHHHHhhcc
Confidence 3 37889999999999887664
No 106
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=1.8e-22 Score=174.45 Aligned_cols=233 Identities=14% Similarity=0.124 Sum_probs=171.7
Q ss_pred CCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 14 GPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 14 ~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
...+.+++.++.+ |+++|++.++++ ++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.. .
T Consensus 97 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~~~-~ 170 (384)
T 3zrp_A 97 KRYPVNVKVLRPSPGDYVKPGEVEEEVRKS-EYKLVALTHVETSTGVRE----PVKDVINKIRKYVELIVVDGVSSVG-A 170 (384)
T ss_dssp TTSSCEEEEECCSTTCCCCHHHHHHHHHHS-CEEEEEEESEETTTTEEC----CHHHHHHHHGGGEEEEEEECTTTTT-T
T ss_pred HHcCCcEEEecCCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCCceEC----cHHHHHHHHHhcCCEEEEECccccc-C
Confidence 3456778888765 899999999653 589999999999999886 5999999999999999999999521 1
Q ss_pred cCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhcc-CCC-----------------C----CCCCC-CCcHH
Q psy6547 89 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTL-VPG-----------------T----HGSTY-GGNPL 145 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~-~~~-----------------~----~~~~~-~~~~~ 145 (266)
..+....++.+..+.+++|+++++ .++|++++++++.+.+ ... . ....+ +.+..
T Consensus 171 --~~~~~~~~~~d~~~~s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 247 (384)
T 3zrp_A 171 --EEVKAEEWNVDVYLTASQKALGSA-AGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVH 247 (384)
T ss_dssp --SCCCTTTTTCSEEEEETTSTTCCC-SSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHH
T ss_pred --ccccccccCCCEEEecCcccccCC-CceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHH
Confidence 112223333333334466999877 7799999999887766 110 0 22222 45666
Q ss_pred HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCccc-EEecCccceeeEEEEeeCccchHHHHHHHHHH
Q psy6547 146 ACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFK-LSSGGLKKSINTLILSVSAILEVYDVCIKMKD 221 (266)
Q Consensus 146 ~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (266)
.+.++.++++.+.. +++.++++++++++.+.|++ ++....... ....+. ++++.++. .+..++++.|.+
T Consensus 248 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~ 320 (384)
T 3zrp_A 248 VILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA-LGLEIVARRPESYSNT---VTGVILKV---ADPQKVLAGTVN 320 (384)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBSCSSGGGBCSS---EEEEECSS---SCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-CCCeEccCcccccCcc---EEEEECCC---CCHHHHHHHHHH
Confidence 77777777876654 36788889999999999998 443222210 112355 77888765 467899999999
Q ss_pred CCceeccCC-C--CEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 222 AGLVTKPIS-N--NIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 222 ~gi~~~~~~-~--~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+||.++++. . +++|++++..++++++++++++|+++++++.
T Consensus 321 ~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 321 EGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp TTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 999998763 1 7899999988999999999999999998764
No 107
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=8.7e-23 Score=176.85 Aligned_cols=221 Identities=15% Similarity=0.185 Sum_probs=166.2
Q ss_pred CCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHH----hcCCEEEEeccccC
Q psy6547 17 MPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCS----QYNVLFIADEVQTG 85 (266)
Q Consensus 17 ~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~----~~g~~li~De~~~~ 85 (266)
+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+. ++++|.++|+ +||+++|+||+|+
T Consensus 126 g~~~~~v~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~~~~~li~Dea~~- 198 (390)
T 1elu_A 126 GITYRFFPVAATLNQGDAAAVLANHL--GPKTRLVILSHLLWNTGQVL----PLAEIMAVCRRHQGNYPVRVLVDGAQS- 198 (390)
T ss_dssp CCEEEEECCGGGSSSSCHHHHHHTTC--CTTEEEEEEESBCTTTCCBC----CHHHHHHHHHHCCSSSCCEEEEECTTT-
T ss_pred CcEEEEEcCCCCCCccchHHHHHHhc--CCCceEEEEeccccCCceec----CHHHHHHHHhhhhhhcCcEEEEEcccc-
Confidence 5567777763 688898888 45789999999999999886 4999999999 9999999999995
Q ss_pred cCCcCcccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCCC----------------------CCCCCC
Q psy6547 86 LGRTGKLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGT----------------------HGSTYG 141 (266)
Q Consensus 86 ~~~~g~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~ 141 (266)
++.. .+... ...+|+++ +||++.+| .++|++++++++.+.+.... .....+
T Consensus 199 ~g~~--~~~~~--~~~~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (390)
T 1elu_A 199 AGSL--PLDFS--RLEVDYYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVAT 273 (390)
T ss_dssp BTTB--CCCTT--TSCCSEEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSC
T ss_pred cCCc--CCChh--hcCCCEEEccccccccCC-CceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCC
Confidence 4322 12222 23455555 99988888 78999999998887776421 112345
Q ss_pred CcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHhhcccc-cCCCcccEEecCccceeeEEEEeeCccchHHHHH
Q psy6547 142 GNPLACKLAMTALDVILEE----NMIENAYKMGEIFRSELSSPAN-KSKASFKLSSGGLKKSINTLILSVSAILEVYDVC 216 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 216 (266)
.+++.+.++.++++.+..+ ++.++++++++++.+.|++ +. ...+.. ..+.|. ++.+.++. +.+..+++
T Consensus 274 ~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~~~~~~---~~~~~~~~--~~~~~~~~ 346 (390)
T 1elu_A 274 SAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ-LPHVHCLAT-SAPQAG---LVSFTVDS--PLGHRAIV 346 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-STTEEESCS-SCCSSS---EEEEEECS--SSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEecC-cccccc---EEEEEcCC--CCCHHHHH
Confidence 6777777777888876553 3678888888999998887 42 211111 134566 88888864 45678899
Q ss_pred HHHHHCCceeccCC-CCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 217 IKMKDAGLVTKPIS-NNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 217 ~~l~~~gi~~~~~~-~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
++|.++||.+.++. .+++|++++...+++++++++++|++
T Consensus 347 ~~l~~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 347 QKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp HHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHHHCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 99999999999874 68999999888999999999999875
No 108
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.90 E-value=5.4e-24 Score=187.43 Aligned_cols=226 Identities=10% Similarity=0.059 Sum_probs=162.0
Q ss_pred CCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccccccc
Q psy6547 18 PGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 97 (266)
Q Consensus 18 ~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~ 97 (266)
.+++.++.++.+.+...+++.+++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++...+....+..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~-~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~ 254 (432)
T 3ei9_A 176 GNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAA-ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFE 254 (432)
T ss_dssp TTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGG
T ss_pred CceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhh
Confidence 367777775433332234444567888887788888876 8999999999999999999999999987744333222221
Q ss_pred ----CCCCcCeeeeccccc-CCchhhhhheecHHh--------hhccCCCCCCCCCCCcHHHHHHHHHHHHHHh---hcc
Q psy6547 98 ----EDVRPDIVILGKALS-GGLYPISAVLADDEV--------MGTLVPGTHGSTYGGNPLACKLAMTALDVIL---EEN 161 (266)
Q Consensus 98 ----~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~ 161 (266)
.+....+.++||+++ +| +|+||+++++++ .+.+........++.+++++.++.+++.... .++
T Consensus 255 ~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 333 (432)
T 3ei9_A 255 IPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 333 (432)
T ss_dssp STTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHH
T ss_pred cCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHH
Confidence 123455667999999 99 999999998876 3444322233455678888888888775321 245
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEE-ecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccC------CCCE
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLS-SGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPI------SNNI 233 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~------~~~~ 233 (266)
+.++++++++++.+.|++ ++ +.. .. ..|. ++|+.++. .+..+++.+|++ +||.+.|+ +.++
T Consensus 334 ~~~~~~~~~~~l~~~L~~-~g---~~~-~~~~~~~---~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~ 402 (432)
T 3ei9_A 334 VIGFYKENTNIIIDTFTS-LG---YDV-YGGKNAP---YVWVHFPN---QSSWDVFAEILEKTHVVTTPGSGFGPGGEGF 402 (432)
T ss_dssp HHHHHHHHHHHHHHHHHH-TT---CCE-EECSSSS---EEEEECTT---SCHHHHHHHHHHHHCEECEEGGGGCGGGTTE
T ss_pred HHHHHHHHHHHHHHHHHH-CC---cee-cCCCcce---EEEEECCC---CCHHHHHHHHHHHCCEEEeCchHhCCCCCCE
Confidence 778888888899888887 43 322 22 3566 88888873 356788888875 49999874 3689
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+|++ +.++++++++++++|++.-
T Consensus 403 iRis--~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 403 VRVS--AFGHRENILEACRRFKQLY 425 (432)
T ss_dssp EEEE--CCSCHHHHHHHHHHHHHHH
T ss_pred EEEE--ecCCHHHHHHHHHHHHHHh
Confidence 9999 4679999999999998754
No 109
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.90 E-value=1e-24 Score=190.26 Aligned_cols=234 Identities=11% Similarity=0.081 Sum_probs=160.9
Q ss_pred CCCC-ceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc-cc
Q psy6547 16 HMPG-YNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-LL 93 (266)
Q Consensus 16 ~~~~-v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~-~~ 93 (266)
.+.+ ++.++.++-+.+...+++.+++++|++++++|++|.+ ++.+.+++|+++|+++|+++|+||+|+++...|. ..
T Consensus 138 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 216 (400)
T 3asa_A 138 TGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPK 216 (400)
T ss_dssp TTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCS
T ss_pred cCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCC
Confidence 4555 7777764211111112221467888887788888877 8999999999999999999999999987754443 12
Q ss_pred ccccCC----CCcCeeeeccccc-CCchhhhhheecHHh-------hhccCCCCCCCCC-CCcHHHHHHHHHHHHHHhhc
Q psy6547 94 AIHYED----VRPDIVILGKALS-GGLYPISAVLADDEV-------MGTLVPGTHGSTY-GGNPLACKLAMTALDVILEE 160 (266)
Q Consensus 94 ~~~~~~----~~~d~~~~sK~~~-~g~~~~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~ 160 (266)
.....+ ..+.+.++||+++ +| +|+||+++++++ ++.+.......++ +.+++++.++..+|+....+
T Consensus 217 ~~~~~~~~~~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 295 (400)
T 3asa_A 217 SIFEIPDARFCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQL 295 (400)
T ss_dssp SGGGSTTGGGTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred chhhCCCCCCceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHH
Confidence 222222 2344667999998 89 999999998877 3333211122233 57888888888888764345
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEE-EeeCccchHHHHHHHHHH-CCceeccC------CC
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLI-LSVSAILEVYDVCIKMKD-AGLVTKPI------SN 231 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~gi~~~~~------~~ 231 (266)
++.++++++++++.+.|++ ++ +.. ..+ .|. ++|+. ++. +.++.+++++|++ +||.+.++ +.
T Consensus 296 ~~~~~~~~~~~~l~~~L~~-~g---~~~-~~~~~~~---~~~~~~~~~--~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~ 365 (400)
T 3asa_A 296 EAIHYYRENSDLLRKALLA-TG---FEV-FGGEHAP---YLWVKPTQA--NISDRDLFDFFLREYHIAITPGIGFGRSGS 365 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TT---CEE-EECSSSS---EEEEECCCT--TCCTTTHHHHHHHHHSEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHH-CC---Cee-eCCCCce---EEEEeccCC--CCCHHHHHHHHHHhCCEEEeChhHhCCCCC
Confidence 6888899999999999987 42 322 222 466 89998 765 4455678888875 59999875 25
Q ss_pred CEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 232 NIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 232 ~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+++|++ +..+++++++++++|++++++...
T Consensus 366 ~~iRis--~~~~~e~i~~~l~~l~~~~~~~~~ 395 (400)
T 3asa_A 366 GFVRFS--SLGKREDILAACERLQMAPALQSH 395 (400)
T ss_dssp TCEEEE--CCSCHHHHHHHHHHHHC-------
T ss_pred CEEEEE--eeCCHHHHHHHHHHHHHHHHhhhh
Confidence 789999 568999999999999999877543
No 110
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=7.7e-24 Score=182.41 Aligned_cols=229 Identities=11% Similarity=0.123 Sum_probs=171.1
Q ss_pred CCCCCCceeec--CC-----CHHHHHHHHhcC---CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 14 GPHMPGYNIIP--YN-----DVDALEAKLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 14 ~~~~~~v~~~~--~~-----d~~~l~~~l~~~---~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
...+.+++.++ .+ |+++|++.++++ ++++++++++++|++|.+. ++++|.++|++||+++|+||+|
T Consensus 111 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~----~~~~i~~~~~~~~~~li~D~a~ 186 (371)
T 2e7j_A 111 ERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP----DVKKIAKVCSEYDVPLLVNGAY 186 (371)
T ss_dssp HHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC----CHHHHHHHHHTTTCCEEEECTT
T ss_pred HHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC----CHHHHHHHHHHcCCeEEEECcc
Confidence 33466788888 65 899999999643 5789999999999999886 5799999999999999999999
Q ss_pred cCcCCcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhc-cCCCCC--CC-----CCCCcHHHHHHHHHHHH
Q psy6547 84 TGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGT-LVPGTH--GS-----TYGGNPLACKLAMTALD 155 (266)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~a~~~~l~ 155 (266)
+.+ ..+ +....++.+..+.++||++++| .++|++++++++.+. +..... .. +.+.++..++++.++++
T Consensus 187 ~~~-~~~--~~~~~~~~di~~~s~sK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 262 (371)
T 2e7j_A 187 AIG-RMP--VSLKEIGADFIVGSGHKSMAAS-GPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFP 262 (371)
T ss_dssp TBT-TBC--CCHHHHTCSEEEEEHHHHSSCC-SSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHH
T ss_pred ccC-CCC--CChhhcCCCEEEecCCcCCCCC-CCcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHH
Confidence 643 221 2223334344444589999988 799999999988776 665433 22 45667777777878888
Q ss_pred HHhhccHHHHH--HHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----
Q psy6547 156 VILEENMIENA--YKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI---- 229 (266)
Q Consensus 156 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---- 229 (266)
.+.. ++.+++ +++++++.+.|++ ++...... ....+. ++++.++ +..++.+.|.++||.+.+.
T Consensus 263 ~~~~-~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~-~~~~~~---~~~~~~~-----~~~~~~~~l~~~gi~~~~~~~~~ 331 (371)
T 2e7j_A 263 HVRE-RIKRWDEEVEKARRFAAEMEK-LGIKQLGD-NPHNHD---LMFFHAE-----VLYEISKKAKGGRFFLYRELKSR 331 (371)
T ss_dssp HHHH-HGGGHHHHHHHHHHHHHHHHH-TTCEEESS-SSCCSS---EEEEECH-----HHHHHHHHSSSGGGHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHH-cCcEEecC-CCccCc---eEEEECC-----CHHHHHHHHHHCCEEEEeccccc
Confidence 7765 677788 8899999999987 42211111 111355 8888875 4678999999999998761
Q ss_pred ---C--CCEEE-EeccCC-CCHHHHHHHHHHHHHHHHHH
Q psy6547 230 ---S--NNIIR-LSPALN-ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ---~--~~~iR-~~~~~~-~t~~~i~~~~~~l~~~~~~~ 261 (266)
+ .+++| ++++.. ++++++++++++|+++++++
T Consensus 332 ~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 332 KIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp TEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 1 57899 998877 89999999999999998753
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.90 E-value=3.6e-23 Score=179.34 Aligned_cols=226 Identities=13% Similarity=0.105 Sum_probs=161.7
Q ss_pred CCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC--
Q psy6547 15 PHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG-- 87 (266)
Q Consensus 15 ~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~-- 87 (266)
..+.+++.++.+ |+++|++.+++. +++++++++++|++|.+. ++++|.++|++||+++|+||+|+++.
T Consensus 142 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~~~~~~ 216 (397)
T 3f9t_A 142 MMDLEYIYAPIKEDYTIDEKFVKDAVEDY-DVDGIIGIAGTTELGTID----NIEELSKIAKENNIYIHVDAAFGGLVIP 216 (397)
T ss_dssp HHTCEEEEECBCTTSSBCHHHHHHHHHHS-CCCEEEEEBSCTTTCCBC----CHHHHHHHHHHHTCEEEEECTTGGGTGG
T ss_pred HcCceeEEEeeCCCCcCCHHHHHHHHhhc-CCeEEEEECCCCCCCCCC----CHHHHHHHHHHhCCeEEEEccccchhhh
Confidence 346678888876 899999999653 578888888888899885 69999999999999999999997642
Q ss_pred CcCc---------ccccccCCCCcCeeeecccccCCchhhhhheecHH-hhhccC---CCCC--------CCCCCCcHHH
Q psy6547 88 RTGK---------LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDE-VMGTLV---PGTH--------GSTYGGNPLA 146 (266)
Q Consensus 88 ~~g~---------~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~-~~~~~~---~~~~--------~~~~~~~~~~ 146 (266)
..+. .+.... +.+..+.+++|++++| .++|+++++++ +.+.+. .... +.....+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (397)
T 3f9t_A 217 FLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCP-IPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGAC 294 (397)
T ss_dssp GCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCC-SSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHH
T ss_pred hcccccccccccccccccc-cCCeEEEccccccCCC-CCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHH
Confidence 2222 223333 5555566688999888 79999887554 444432 1111 1112234455
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCcee
Q psy6547 147 CKLAMTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVT 226 (266)
Q Consensus 147 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 226 (266)
+.++...+....-++..++++++++++.+.|++ ++...+. .+.+. ++++..+. ..++.+.|.++||.+
T Consensus 295 ~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~---~~~~~---~~~~~~~~-----~~~~~~~l~~~gi~v 362 (397)
T 3f9t_A 295 TYAVLRYLGREGQRKIVNECMENTLYLYKKLKE-NNFKPVI---EPILN---IVAIEDED-----YKEVCKKLRDRGIYV 362 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCBSS---CCSSS---EEEEECTT-----HHHHHHHHHHTTCBC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEc---CCCcc---EEEEEeCC-----HHHHHHHHHhCCeEE
Confidence 555555554333356778888999999999998 4322221 23455 77776644 678999999999999
Q ss_pred ccCC-CCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 227 KPIS-NNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 227 ~~~~-~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
.++. ++++|++++..++++++++++++|+++++
T Consensus 363 ~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 363 SVCNCVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EECSSSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred eccCCCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 9874 58999999988999999999999998764
No 112
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.90 E-value=2e-22 Score=174.87 Aligned_cols=230 Identities=14% Similarity=0.102 Sum_probs=168.1
Q ss_pred CCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 17 MPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 17 ~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+.+++.++. .|+++|++.+++++++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++..
T Consensus 106 g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~-~g~~-- 178 (392)
T 2z9v_A 106 SPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTIN----PIDAIGALVSAHGAYLIVDAVSS-FGGM-- 178 (392)
T ss_dssp CSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEEC----CHHHHHHHHHHTTCEEEEECTTT-BTTB--
T ss_pred CCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceec----cHHHHHHHHHHcCCeEEEEcccc-cCCc--
Confidence 556777775 38999999996555788999999999999886 58999999999999999999995 3221
Q ss_pred ccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCC--------------------CCCCCCCCcHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPG--------------------THGSTYGGNPLACKL 149 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~a 149 (266)
.+....++ +|+++ +||+++++ .++|++++++++.+.+... ......+.+...+.+
T Consensus 179 ~~~~~~~~--~d~~~~s~sK~~~~~-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 255 (392)
T 2z9v_A 179 KTHPEDCK--ADIYVTGPNKCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEING 255 (392)
T ss_dssp SCCGGGGT--CSEEEECSSSTTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHH
T ss_pred cccccccc--ceEEEecCcccccCC-CceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHH
Confidence 12223333 45544 78988865 5679999998887655321 012234556667777
Q ss_pred HHHHHHHHhhc---cHHHHHHHHHHHHHHHhhcccccCCCc-ccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-Cc
Q psy6547 150 AMTALDVILEE---NMIENAYKMGEIFRSELSSPANKSKAS-FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GL 224 (266)
Q Consensus 150 ~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi 224 (266)
+.++++.+... ++.++++++++++++.|++ ++..... ......+. ++++.++. +.+..+++++|.++ ||
T Consensus 256 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~l~~~L~~~~gi 329 (392)
T 2z9v_A 256 LDVALDLYLNEGPEAVWARHALTAKAMRAGVTA-MGLSVWAASDSIASPT---TTAVRTPD--GVDEKALRQAARARYGV 329 (392)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCTT---EEEEECCT--TCCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cCCeeccCCccccCCc---eEEEECCC--CCCHHHHHHHHHhcCCE
Confidence 77788776543 5778888999999999988 5332222 10012355 78888864 45678999999987 99
Q ss_pred eeccC----CCCEEEEeccC-CCCHHHHHHHHHHHHHHHHHHh
Q psy6547 225 VTKPI----SNNIIRLSPAL-NITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 225 ~~~~~----~~~~iR~~~~~-~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+.++ ..+++|+++.. .++++++++++++|+++++++.
T Consensus 330 ~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 330 VFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp ECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 99875 36899999644 7899999999999999988753
No 113
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.90 E-value=4.1e-23 Score=180.81 Aligned_cols=236 Identities=13% Similarity=0.114 Sum_probs=166.3
Q ss_pred CCCCCceeecC-------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 15 PHMPGYNIIPY-------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 15 ~~~~~v~~~~~-------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
..+.+++.++. .|+++|++.++ +++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|+++.
T Consensus 147 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 223 (416)
T 1bw0_A 147 AYGIGMHFYNCRPENDWEADLDEIRRLKD--DKTKLLIVTNPSNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMV 223 (416)
T ss_dssp HTTCEEEEEEEEGGGTTEECHHHHHHHCC--TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred HcCcEEEEeecCcccCCCCCHHHHHHHhc--cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 34566777663 37999999993 457777766668888876 899999999999999999999999998875
Q ss_pred CcCc----cc-ccccCCC---CcCeeeeccccc-CCchhhhhheecHH--hhhccCCC---CCCCCCCCcHHHHHHHHHH
Q psy6547 88 RTGK----LL-AIHYEDV---RPDIVILGKALS-GGLYPISAVLADDE--VMGTLVPG---THGSTYGGNPLACKLAMTA 153 (266)
Q Consensus 88 ~~g~----~~-~~~~~~~---~~d~~~~sK~~~-~g~~~~g~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~a~~~~ 153 (266)
..|. .+ .+...+. ...+.++||+++ +| +|+||++++++ +++.+... ....+++.++++++++.++
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 302 (416)
T 1bw0_A 224 FKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEA 302 (416)
T ss_dssp CCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHH
T ss_pred cCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHH
Confidence 4443 11 2222221 223446999987 78 99999998653 33322210 1123567889999999888
Q ss_pred HHHHh---hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeC---ccchHHHHHHHHH-HCCcee
Q psy6547 154 LDVIL---EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVS---AILEVYDVCIKMK-DAGLVT 226 (266)
Q Consensus 154 l~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~l~-~~gi~~ 226 (266)
|+... -++..++++++++++.+.|++ +. .+....+..|+ ++|+.++.. ...+..+++++|+ ++||.+
T Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 376 (416)
T 1bw0_A 303 LLNTPQEHLDQIVAKIEESAMYLYNHIGE-CI--GLAPTMPRGAM---YLMSRIDLEKYRDIKTDVEFFEKLLEEENVQV 376 (416)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHHHTT-ST--TEEECCCCBTT---EEEEEECGGGBSSCCSHHHHHHHHHHHHCEEC
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHh-CC--CCcccCCCeeE---EEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEE
Confidence 87421 134677788888888888887 42 22221123466 888887631 0135788999885 889999
Q ss_pred ccCC----CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 227 KPIS----NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 227 ~~~~----~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.++. .+++|+++ ..+++++++++++|.+++++..
T Consensus 377 ~~g~~f~~~~~iRis~--~~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 377 LPGTIFHAPGFTRLTT--TRPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp EEGGGGTCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHHB
T ss_pred ecccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHhh
Confidence 8752 57999996 4789999999999999998754
No 114
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=1.2e-22 Score=173.42 Aligned_cols=227 Identities=16% Similarity=0.103 Sum_probs=167.4
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.++++ ++++|++++++|++|.+. ++++|.++|++||+++|+||+| +++...
T Consensus 96 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~li~D~a~-~~~~~~ 169 (353)
T 2yrr_A 96 HGLDPEVLDFPPGEPVDPEAVARALKRR-RYRMVALVHGETSTGVLN----PAEAIGALAKEAGALFFLDAVT-TLGMLP 169 (353)
T ss_dssp TTCCEEEEECCTTSCCCHHHHHHHHHHS-CCSEEEEESEETTTTEEC----CHHHHHHHHHHHTCEEEEECTT-TTTTSC
T ss_pred cCCceEEEeCCCCCCCCHHHHHHHHHhC-CCCEEEEEccCCCcceec----CHHHHHHHHHHcCCeEEEEcCc-cccccc
Confidence 4567777774 4899999999653 578889999999999886 5889999999999999999999 454321
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCC---C------------CCCCCCCCcHHHHHHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVP---G------------THGSTYGGNPLACKLAMTA 153 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~a~~~~ 153 (266)
+....++ +|+++ ++|+++++ .++|++++++++.+.+.. . ......+.+...+.++.++
T Consensus 170 --~~~~~~~--~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 244 (353)
T 2yrr_A 170 --FSMRAMG--VDYAFTGSQKCLSAP-PGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEA 244 (353)
T ss_dssp --CCHHHHT--CSEEECCTTSTTCCC-SSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHH
T ss_pred --ccccccC--ceEEEecCcccccCC-CceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHH
Confidence 2233333 45555 67988865 557999999998877651 0 1223345677777777788
Q ss_pred HHHHhhc---cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-
Q psy6547 154 LDVILEE---NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI- 229 (266)
Q Consensus 154 l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~- 229 (266)
++.+..+ ++.++++++++++.+.|++ ++...... ....+. ++++.++. +.+..++.++|.++||.++++
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~ 317 (353)
T 2yrr_A 245 LDLVLEEGVAARERRAREVYAWVLEELKA-RGFRPYPK-ASPLPT---VLVVRPPE--GVDADRLVRALYAEGVAVAGGI 317 (353)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCEESCS-SSBCTT---EEEEECCT--TCCHHHHHHHHHHTTEECEECC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHH-CCCccccC-ccCCCe---EEEEECCC--CCCHHHHHHHHHHCCEEEeCCc
Confidence 8876543 5678888999999999987 43222211 111355 67888764 456889999999999999875
Q ss_pred ---CCCEEEEeccCCCCHHHHH-HHHHHHHHHHHH
Q psy6547 230 ---SNNIIRLSPALNITEQELR-EGLDIIINTINT 260 (266)
Q Consensus 230 ---~~~~iR~~~~~~~t~~~i~-~~~~~l~~~~~~ 260 (266)
..+++|++++...++++++ +++++|+++++.
T Consensus 318 ~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 318 GPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp GGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred cccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 3578999987778999999 999999988753
No 115
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=1.7e-22 Score=176.51 Aligned_cols=232 Identities=12% Similarity=0.070 Sum_probs=169.5
Q ss_pred CCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 15 PHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 15 ~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
..+.+++.++.+ |+++|++.++++ ++++|++++++|++|.+. ++++|.++|++||+++|+|++|+ ++.
T Consensus 107 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~-~~~- 179 (416)
T 3isl_A 107 RYGANVHMLECEWGTVFDPEDIIREIKKV-KPKIVAMVHGETSTGRIH----PLKAIGEACRTEDALFIVDAVAT-IGG- 179 (416)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCHHHHHHHHHTTCEEEEECTTT-TTT-
T ss_pred hcCCeeEEEecCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCceec----CHHHHHHHHHHcCCEEEEECCcc-ccC-
Confidence 346677888765 899999999532 578999999999999886 59999999999999999999995 211
Q ss_pred CcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC-----------------------------------
Q psy6547 90 GKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG----------------------------------- 134 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~----------------------------------- 134 (266)
..+....++.+..+.+++|++.++ .++|++++++++.+.+...
T Consensus 180 -~~~~~~~~~~d~~~~s~~K~l~g~-~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 257 (416)
T 3isl_A 180 -CEVKVDEWKIDAAIGGTQKCLSVP-SGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDY 257 (416)
T ss_dssp -SCCCTTTTTCSEEECCSSSTTCCC-SSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHH
T ss_pred -CCcchhhcCCCEEEecCccccCCC-CCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhh
Confidence 112233333333333477998877 7889999999887665421
Q ss_pred ---CCCCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCc
Q psy6547 135 ---THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSA 208 (266)
Q Consensus 135 ---~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 208 (266)
......+.+...+.++.++++.+.. +++.++++++++++.+.|++ ++...........+. ++++.+++
T Consensus 258 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~---~~~~~~~~-- 331 (416)
T 3isl_A 258 WSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA-MGLRLFGDDSCKMPV---VTCVEIPG-- 331 (416)
T ss_dssp TSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBCSCGGGBCTT---EEEEECCT--
T ss_pred hcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-cCCEeccCccccCCc---EEEEeCCC--
Confidence 1112335577777777788877655 36788889999999999998 543322211112356 88888875
Q ss_pred cchHHHHHHHHHHC-CceeccC----CCCEEEEeccCCCCHHH-HHHHHHHHHHHHHHH
Q psy6547 209 ILEVYDVCIKMKDA-GLVTKPI----SNNIIRLSPALNITEQE-LREGLDIIINTINTM 261 (266)
Q Consensus 209 ~~~~~~~~~~l~~~-gi~~~~~----~~~~iR~~~~~~~t~~~-i~~~~~~l~~~~~~~ 261 (266)
+.+..+++++|.++ ||.++++ ..+++|++++..+++++ +++++++|+++++++
T Consensus 332 ~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 332 GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 55788999999887 9999864 46899999866566666 999999999998875
No 116
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.89 E-value=1.2e-23 Score=180.79 Aligned_cols=226 Identities=15% Similarity=0.100 Sum_probs=164.0
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
...+.+++.++.++-..+++++ +..++++++++.++|++|.+. +++++.++|+++|+++|+||+|++|...+...
T Consensus 124 ~~~g~~~~~v~~~~~~~~~~l~-~~~~~~~v~i~~p~nptG~~~----~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~ 198 (360)
T 3hdo_A 124 EVQGARVRTFGLTGDFRIAGFP-ERYEGKVFFLTTPNAPLGPSF----PLEYIDELARRCAGMLVLDETYAEFAESNALE 198 (360)
T ss_dssp HHHTCEEEEECBCTTSSBTTCC-SSBCSSEEEEESSCTTTCCCC----CHHHHHHHHHHBSSEEEEECTTGGGSSCCCTH
T ss_pred HHCCCEEEEeeCCCCCCHHHHH-hhcCCCEEEEeCCCCCCCCCc----CHHHHHHHHHHCCCEEEEECChHhhCCcchhH
Confidence 3456677788765422233333 212356788777888899886 67788899999999999999998774332222
Q ss_pred ccccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGE 171 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~ 171 (266)
.....+..+.+.++||.++ +| +|+||+++++++.+.+... ..+++.++++++++.++|+..+. ++..++++++++
T Consensus 199 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 275 (360)
T 3hdo_A 199 LVRRHENVVVTRTLSKSYSLAG-MRIGLAIARPEVIAALDKI--RDHYNLDRLAQAACVAALRDQAYLSECCRRIRETRE 275 (360)
T ss_dssp HHHHCSSEEEEEESTTTTSCTT-SCCEEEECCHHHHHHHHHH--SCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HhccCCCEEEEecchHhhcCCc-cceeeEeeCHHHHHHHHHh--CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 2233445566677999998 88 9999999999988877642 24577899999999988875221 456777788888
Q ss_pred HHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----CCEEEEeccCCCCHHHH
Q psy6547 172 IFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQEL 247 (266)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~iR~~~~~~~t~~~i 247 (266)
++.+.|++ ++ +.. .++.|. ++++.++. .+..++.+.|.++||.++++. .+++|++++ +++++
T Consensus 276 ~l~~~L~~-~~---~~~-~~~~~~---~~~~~~~~---~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~ 341 (360)
T 3hdo_A 276 WFTTELRS-IG---YDV-IPSQGN---YLFATPPD---RDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEM 341 (360)
T ss_dssp HHHHHHHH-TT---CEE-CCCSSS---EEEEECTT---CCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHH
T ss_pred HHHHHHHH-CC---CEE-cCCCcc---EEEEECCC---CCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHH
Confidence 88888887 42 332 344567 88887653 467899999999999998864 489999944 99999
Q ss_pred HHHHHHHHHHHHHH
Q psy6547 248 REGLDIIINTINTM 261 (266)
Q Consensus 248 ~~~~~~l~~~~~~~ 261 (266)
+++++.|+++.+.+
T Consensus 342 ~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 342 EQTLAALKEIGEGH 355 (360)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhccc
Confidence 99999999887654
No 117
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=1.2e-22 Score=176.08 Aligned_cols=223 Identities=11% Similarity=0.052 Sum_probs=164.2
Q ss_pred CCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCe
Q psy6547 25 YNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDI 104 (266)
Q Consensus 25 ~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~ 104 (266)
..|++++++++++. ++++|+++.+.+++|.+ .+.+++++|+++|++||+++|+|++++ + +..+....+++++.+
T Consensus 121 ~~d~~~l~~~i~~~-~~~~v~~~~~~~~~G~~-~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~d~~~ 194 (379)
T 3ke3_A 121 PVDIETAVAKIKED-KSAIVYAPHVETSSGII-LSEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMKELGIDVLI 194 (379)
T ss_dssp CCCHHHHHHHHHHH-TCSEEEEESEETTTTEE-CCHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHHHHTCSEEE
T ss_pred CCCHHHHHHHHhhc-CCcEEEEEeecCCCcee-CCHHHHHHHHHHHHHcCCEEEEEeccc--C--CccccccccCCCEEE
Confidence 36899999999542 57888888888888876 788889999999999999999999986 3 334455556666666
Q ss_pred eeecccccCCchhhhhheecHHhhhccCCCC---C-------------------CCCCCCcHHHHHHHHHHHHHHhhc--
Q psy6547 105 VILGKALSGGLYPISAVLADDEVMGTLVPGT---H-------------------GSTYGGNPLACKLAMTALDVILEE-- 160 (266)
Q Consensus 105 ~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~~~~~a~~~~l~~~~~~-- 160 (266)
.+++|+++++ .++|++++++++.+.+.... . ..+++.++..++++.++++.+..+
T Consensus 195 ~s~~K~l~~~-~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~ 273 (379)
T 3ke3_A 195 SAPQKGWSST-PCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGF 273 (379)
T ss_dssp ECTTTTTCSC-CCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred ecchhhcCCC-CceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcH
Confidence 6678999876 67899999998876664311 0 112377778888888999887664
Q ss_pred -cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC---------
Q psy6547 161 -NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--------- 230 (266)
Q Consensus 161 -~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--------- 230 (266)
++.++.+++++++++.|++ ++...+.......+. +..+..+. . ...+.+.|.++||.+.++.
T Consensus 274 ~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~---i~~~~~~~---~-~~~~~~~L~~~Gi~v~~g~~~~~~~~~~ 345 (379)
T 3ke3_A 274 DILRDAQWELGNRVRKVLTD-KGIESVAAEGFEAPG---VVVSYTER---D-DMHKGSAFAEAGLQIAAGVPLKVGEPDN 345 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCBSBCTTCBCSS---EEEEECSC---H-HHHSSHHHHHTTCCCEECCCCSSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCEecCCccccCce---EEEEccCC---c-chHHHHHHHHCCeEEeCCccccccccCc
Confidence 6788888999999999988 553322210111222 33333322 1 2223778889999988763
Q ss_pred CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 ~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+.+|++++..+|++|+++++++|+++++++.
T Consensus 346 ~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 346 FKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999998765
No 118
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.89 E-value=2.4e-23 Score=182.04 Aligned_cols=230 Identities=12% Similarity=0.082 Sum_probs=162.1
Q ss_pred CCCCCC-ceeecC---C----CHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 14 GPHMPG-YNIIPY---N----DVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 14 ~~~~~~-v~~~~~---~----d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
...+.+ ++.++. + |+++|++.+++. +++++++++.++|++|.+ ++.+++++|+++|++||+++|+||+|.
T Consensus 148 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~y~ 226 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTD-PTPEQWKQIASVMKRRFLFPFFDSAYQ 226 (412)
T ss_dssp HHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 345667 777776 3 799999999653 367788778888888876 899999999999999999999999999
Q ss_pred CcCCcC---cccccccC----CCCcCeeeecccccC-Cchhhhhhee---cHH----hhhccCCCCCCCCCC-CcHHHHH
Q psy6547 85 GLGRTG---KLLAIHYE----DVRPDIVILGKALSG-GLYPISAVLA---DDE----VMGTLVPGTHGSTYG-GNPLACK 148 (266)
Q Consensus 85 ~~~~~g---~~~~~~~~----~~~~d~~~~sK~~~~-g~~~~g~~~~---~~~----~~~~~~~~~~~~~~~-~~~~~~~ 148 (266)
+++..| ..+.+... +....+.++||.+++ | +|+||+++ +++ +.+.+... +..++. ++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 304 (412)
T 1ajs_A 227 GFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQKI-VRVTWSNPPAQGAR 304 (412)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHHH-HHTTTSSCCSHHHH
T ss_pred cccCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHHHH-HhcccCCCChHHHH
Confidence 887654 32222211 112335669999996 9 99999998 776 33333321 223333 5888888
Q ss_pred HHHHHHHHHh--------hccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHH
Q psy6547 149 LAMTALDVIL--------EENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKM 219 (266)
Q Consensus 149 a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 219 (266)
++.++|+... .+++.++++++++++.+.|++ ++. ..+....+..|. +.|+.+ +...+...|
T Consensus 305 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~l 374 (412)
T 1ajs_A 305 IVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEA-LKTPGTWNHITDQIGM---FSFTGL------NPKQVEYLI 374 (412)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCSSCCHHHHHCCSS---EEECCC------CHHHHHHHH
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCeeEEcCCCce---EEEeCC------CHHHHHHHH
Confidence 8888887542 245778888899999999887 541 123221223455 555433 234455556
Q ss_pred HHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 220 KDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 220 ~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.++||.+.++ +|++++. .+++++++++++|+++++++
T Consensus 375 ~~~gv~v~~~----~Ris~~~-~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 375 NQKHIYLLPS----GRINMCG-LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp HTTCEECCTT----SEEEGGG-CCTTTHHHHHHHHHHHHHHC
T ss_pred HhCCEEecCC----cEEEeee-CCHHHHHHHHHHHHHHHHhc
Confidence 6889999985 5999773 48999999999999998753
No 119
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.82 E-value=6.2e-25 Score=191.08 Aligned_cols=242 Identities=13% Similarity=0.084 Sum_probs=169.5
Q ss_pred CcCcccccCCCCCCceeecC--------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEE
Q psy6547 6 DPTSYNEFGPHMPGYNIIPY--------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~--------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
++.....+...+.+++.++. .|+++|++.+++ ++++++++++++|++|.+ ++.+.+++|+++|++||+++
T Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~l 200 (392)
T 3b1d_A 123 YPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE-NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVIL 200 (392)
Confidence 33444444555667777776 367888888842 357888887788888876 88899999999999999999
Q ss_pred EEeccccCcCCcCcc----ccccc--CCCCcCeeeeccccc-CCchhhhhheecH-HhhhccCCCCCCCCC-CCcHHHHH
Q psy6547 78 IADEVQTGLGRTGKL----LAIHY--EDVRPDIVILGKALS-GGLYPISAVLADD-EVMGTLVPGTHGSTY-GGNPLACK 148 (266)
Q Consensus 78 i~De~~~~~~~~g~~----~~~~~--~~~~~d~~~~sK~~~-~g~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~ 148 (266)
|+||+|+++.+.|.. +.+.. .+..+.+.++||+++ +| +|+||+++++ ++.+.+.......++ +.++++++
T Consensus 201 i~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (392)
T 3b1d_A 201 VSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYI 279 (392)
Confidence 999999887654421 12222 345677788999998 89 9999999865 487777765444433 46888888
Q ss_pred HHHHHHHHHhh--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEe-cCccceeeEEEEeeCccchHHHHHHHHH-HCCc
Q psy6547 149 LAMTALDVILE--ENMIENAYKMGEIFRSELSSPANKSKASFKLSS-GGLKKSINTLILSVSAILEVYDVCIKMK-DAGL 224 (266)
Q Consensus 149 a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi 224 (266)
++.++|+..+. +++.++++++++.+.+.|++.+ +.+.. ..+ .+. ++|+.++.. +.+..+++++|+ ++||
T Consensus 280 a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~-~~~~~~~---~~~i~~~~~-~~~~~~l~~~l~~~~gi 352 (392)
T 3b1d_A 280 ATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEA--PRLKV-MKPQGTY---LIWLDFSDY-GLTDDALFTLLHDQAKV 352 (392)
Confidence 88888864211 3345556666666666665411 12332 233 344 456777641 235678999996 7899
Q ss_pred eeccC------CCCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 225 VTKPI------SNNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 225 ~~~~~------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
.+.++ +.+++|+++. .+++++++++++|.++++
T Consensus 353 ~v~~g~~f~~~~~~~iRi~~~--~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 353 ILNRGSDYGSEGELHARLNIA--APKSLVEEICKRIVCCLP 391 (392)
Confidence 99875 3478999944 578999999999998775
No 120
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=1.7e-21 Score=169.57 Aligned_cols=224 Identities=15% Similarity=0.155 Sum_probs=162.8
Q ss_pred CCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 17 MPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 17 ~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.. ..
T Consensus 138 g~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~~~~~g-~~-- 208 (406)
T 1kmj_A 138 GAELRVIPLNPDGTLQLETLPTLF--DEKTRLLAITHVSNVLGTEN----PLAEMITLAHQHGAKVLVDGAQAVM-HH-- 208 (406)
T ss_dssp TCEEEEECBCTTSCBCGGGHHHHC--CTTEEEEEEESBCTTTCCBC----CHHHHHHHHHHTTCEEEEECTTTTT-TS--
T ss_pred CCEEEEEecCCCCCcCHHHHHHHh--ccCCeEEEEeCCCccccCcC----CHHHHHHHHHHcCCEEEEEchhhcC-CC--
Confidence 5567777753 789999999 44789999999999999885 4999999999999999999999632 21
Q ss_pred ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCC---------------------CCCCcHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGS---------------------TYGGNPLACKLA 150 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~a~ 150 (266)
.+.....+.+..+.++||.+++ ..+|++++++++.+.+....... ..+.+++.+.++
T Consensus 209 ~~~~~~~~~d~~~~s~~K~~g~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 286 (406)
T 1kmj_A 209 PVDVQALDCDFYVFSGHKLYGP--TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIG 286 (406)
T ss_dssp CCCHHHHTCSEEEEEGGGTTSC--TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHH
T ss_pred CCcccccCCCEEEEEchhccCC--CCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHH
Confidence 1222223333333459999963 23799999999888876543211 122344555544
Q ss_pred H-HHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEe--cCccceeeEEEEeeCccchHHHHHHHHHHCCc
Q psy6547 151 M-TALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSS--GGLKKSINTLILSVSAILEVYDVCIKMKDAGL 224 (266)
Q Consensus 151 ~-~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 224 (266)
. ++++.+.. +++.++++++++++.+.|++ +. .+.. ... .|. ++.+.++. .+..++.+.|.++||
T Consensus 287 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--~~~~-~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~gi 356 (406)
T 1kmj_A 287 LGAALEYVSALGLNNIAEYEQNLMHYALSQLES-VP--DLTL-YGPQNRLG---VIAFNLGK---HHAYDVGSFLDNYGI 356 (406)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-ST--TEEE-ESCTTCCS---EEEEEETT---CCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc-CC--CeEE-ecCCCcCC---EEEEEECC---CCHHHHHHHHhhCCc
Confidence 4 77777654 35778888899999999988 42 1221 112 455 78887642 457789999999999
Q ss_pred eeccCC------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 225 VTKPIS------------NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 225 ~~~~~~------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.++++. .+++|++++..+|+++++++++.|+++++.+
T Consensus 357 ~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 357 AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 998653 4899999999899999999999999988753
No 121
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=6.9e-22 Score=172.89 Aligned_cols=224 Identities=14% Similarity=0.158 Sum_probs=166.8
Q ss_pred CCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 17 MPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 17 ~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
+.+++.++. +++|++.+ .+++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++.. .+...
T Consensus 146 g~~~~~v~~--~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~-~g~~--~~~~~ 214 (416)
T 1qz9_A 146 GYTLRLVDS--PEELPQAI--DQDTAVVMLTHVNYKTGYMH----DMQALTALSHECGALAIWDLAHS-AGAV--PVDLH 214 (416)
T ss_dssp SCEEEEESS--GGGHHHHC--STTEEEEEEESBCTTTCBBC----CHHHHHHHHHHHTCEEEEECTTT-TTTS--CCCHH
T ss_pred CceEEEeCc--HHHHHHHh--CCCceEEEEeccccCccccc----CHHHHHHHHHHcCCEEEEEcccc-ccCc--CCChh
Confidence 567788877 88999988 34789999999999999886 58999999999999999999995 3322 12222
Q ss_pred cCCCCcCeee--ecccccCCchhh-hhheecHHhhhccCCCCC-----------------------CCCCCCcHHHHHHH
Q psy6547 97 YEDVRPDIVI--LGKALSGGLYPI-SAVLADDEVMGTLVPGTH-----------------------GSTYGGNPLACKLA 150 (266)
Q Consensus 97 ~~~~~~d~~~--~sK~~~~g~~~~-g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~a~ 150 (266)
.+ .+|+++ ++|++++| .++ |++++++++.+.+..... ....+.++..++++
T Consensus 215 ~~--~~d~~~~s~~K~l~~g-~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 291 (416)
T 1qz9_A 215 QA--GADYAIGCTYKYLNGG-PGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMV 291 (416)
T ss_dssp HH--TCSEEEECSSSTTCCC-TTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHH
T ss_pred hc--CCCEEEecCcccCCCC-CCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHH
Confidence 23 356665 56999888 788 999999888766654211 12235677778888
Q ss_pred HHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccc---cCCCccc-EEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 151 MTALDVILE---ENMIENAYKMGEIFRSELSSPAN---KSKASFK-LSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 151 ~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
.++++.+.. +++.++++++++++.+.|++.++ ....... ....+. ++++.+++ ..+++++|.++|
T Consensus 292 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~-----~~~l~~~l~~~g 363 (416)
T 1qz9_A 292 ECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGS---HVSFEHPE-----GYAVIQALIDRG 363 (416)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCS---EEEEECTT-----HHHHHHHHHTTT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCC---EEEEecCC-----HHHHHHHHHhCC
Confidence 888988764 35788889999999999987212 1111110 001245 78887753 578999999999
Q ss_pred ceeccCCCCEEEEecc-CCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 224 LVTKPISNNIIRLSPA-LNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 224 i~~~~~~~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
|.+.....+++|++++ +.++++++++++++|++++++..
T Consensus 364 i~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 364 VIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp EECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 9987766889999987 58899999999999999987643
No 122
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.89 E-value=5e-23 Score=180.17 Aligned_cols=231 Identities=10% Similarity=0.155 Sum_probs=163.2
Q ss_pred cCCCCCCceeecC------CCHHHHHHHHhcC---CCEEEEEEccc-cCCCCcccCChHHHHHHHHHHH------hcCCE
Q psy6547 13 FGPHMPGYNIIPY------NDVDALEAKLKSN---PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCS------QYNVL 76 (266)
Q Consensus 13 ~~~~~~~v~~~~~------~d~~~l~~~l~~~---~~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~------~~g~~ 76 (266)
+...+.+++.++. .|+++|++.+++. +..++++++++ +|++|.+ ++.+.+++|+++|+ +||++
T Consensus 142 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~ 220 (413)
T 3t18_A 142 CEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYS-LSDEEWDEVITFLKEKAEDKDKKIT 220 (413)
T ss_dssp HHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTTSTTCEEE
T ss_pred HHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccCCcEE
Confidence 4445667777774 2799999999642 23347777765 8888877 89999999999999 89999
Q ss_pred EEEeccccCcCCcCcc---cccccCCCCcC---e--eeeccccc-CCchhhhhhee---cHHhhhccCCCCCC----CCC
Q psy6547 77 FIADEVQTGLGRTGKL---LAIHYEDVRPD---I--VILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG----STY 140 (266)
Q Consensus 77 li~De~~~~~~~~g~~---~~~~~~~~~~d---~--~~~sK~~~-~g~~~~g~~~~---~~~~~~~~~~~~~~----~~~ 140 (266)
+|+||+|.+|+..|.. +.....++..+ + .++||.++ +| +|+||+++ ++++.+.+...... ...
T Consensus 221 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (413)
T 3t18_A 221 LIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLAHSARCNWS 299 (413)
T ss_dssp EEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHHHhhhcccc
Confidence 9999999888766642 12222334444 2 36999999 89 99999998 88888777643211 123
Q ss_pred CCcHHHHHHHHHHHHHHh-----h--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHH
Q psy6547 141 GGNPLACKLAMTALDVIL-----E--ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVY 213 (266)
Q Consensus 141 ~~~~~~~~a~~~~l~~~~-----~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (266)
..+.+++.++..+++... . +.+.++++++++++.+.|++ ++. .......|. ++|+... +..
T Consensus 300 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~---~~~~~~~~~---~~~~~~~-----~~~ 367 (413)
T 3t18_A 300 NGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE-NKL---TMIPYFGGF---FTFIPTD-----KAF 367 (413)
T ss_dssp SCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC---CCBCCCSSS---CEEEECS-----CHH
T ss_pred CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCC---CccCCCceE---EEEeCCC-----CHH
Confidence 467788888777765421 1 24567778888888888887 432 221223455 5665442 477
Q ss_pred HHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 214 DVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 214 ~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
++++.|.++||.+.|+ .+++|++++.. +++++ +++|.++++++.
T Consensus 368 ~~~~~l~~~gv~v~~g-~~~iRis~~~~-~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 368 DIVKDLEKENIFTIPS-AKGIRVAICGV-GEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp HHHHHHHHTTEECEEC-SSEEEECTTTS-CGGGH---HHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecC-CCceEEEEeeC-CHHHH---HHHHHHHHHHHh
Confidence 8999999999999997 78999997744 55555 888888887754
No 123
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.89 E-value=7.2e-22 Score=170.45 Aligned_cols=225 Identities=14% Similarity=0.127 Sum_probs=162.4
Q ss_pred CCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 17 MPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 17 ~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+.+++.++. .|+++|++.+ .++++++++++++|++|.+. ++++|+++|++||+++|+|++|+....
T Consensus 118 g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~~~~~~~~--- 188 (376)
T 3f0h_A 118 EIPYVALKLEHGKKLTKEKLYEYD--NQNFTGLLVNVDETSTAVLY----DTMMIGEFCKKNNMFFVCDCVSAFLAD--- 188 (376)
T ss_dssp TCCEEEEECCTTCCCCHHHHHTTT--TSCCCEEEEESEETTTTEEC----CHHHHHHHHHHTTCEEEEECTTTTTTS---
T ss_pred CCceEEEeCCCCCCCCHHHHHHhh--ccCceEEEEecccCCcceec----CHHHHHHHHHHcCCEEEEEcCccccCc---
Confidence 455666653 3789999877 45789999999999999885 499999999999999999999964422
Q ss_pred ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCC-----------------CCCCCCcHHHHHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTH-----------------GSTYGGNPLACKLAMTAL 154 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~a~~~~l 154 (266)
.+....++++..+.+++|+++++ .++|++++++++.+.+..... ...++.+...++++.+++
T Consensus 189 ~~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 267 (376)
T 3f0h_A 189 PFNMNECGADVMITGSQKVLACP-PGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERL 267 (376)
T ss_dssp CCCHHHHTCSEEEEETTTTTCCC-SSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHH
T ss_pred cccccccCccEEEecCcccccCC-CceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHH
Confidence 23344455566666688999966 668889999988776653211 124455555556777777
Q ss_pred HHHhhc----cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-CceeccC
Q psy6547 155 DVILEE----NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKPI 229 (266)
Q Consensus 155 ~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~ 229 (266)
+.+..+ .+.++++++++++.+.|++ ++...... ...+. ++.+. +. +.+..++++.|.++ ||.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~--~~~~~---~~~~~-~~--~~~~~~l~~~l~~~~gi~v~~g 338 (376)
T 3f0h_A 268 KEIKKHGGADAEVARIASQAADFRAKIKD-LPFELVSE--SPANG---VTSVH-PT--TANAYDIFLKLKDEYGIWICPN 338 (376)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHTTT-SSEEECCS--SBBTT---EEEEE-ES--SSCHHHHHHHHHHHSSEECEEC
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCccCcc--ccCce---EEEEe-CC--CCCHHHHHHHHHHhCCEEEecC
Confidence 776554 4667777788888888877 44211111 11233 33333 33 45788999999988 9999875
Q ss_pred ----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 230 ----SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 230 ----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
..+++|++++..+|++++++++++|++++++
T Consensus 339 ~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 339 GGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp CGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 3579999999899999999999999998864
No 124
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.89 E-value=2.9e-22 Score=174.03 Aligned_cols=224 Identities=14% Similarity=0.112 Sum_probs=167.5
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.+++. ++++|++++++|++|.+. ++++|.++|+++|+++|+||+|+ ++..
T Consensus 131 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~-~g~~- 203 (393)
T 1vjo_A 131 YGADVRTISKPWGEVFSLEELRTALETH-RPAILALVHAETSTGARQ----PLEGVGELCREFGTLLLVDTVTS-LGGV- 203 (393)
T ss_dssp TTCEEEEEECCTTCCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCTTHHHHHHHHTCEEEEECTTT-TTTS-
T ss_pred cCCceEEEecCCCCCCCHHHHHHHHhhC-CceEEEEeccCCCcceec----cHHHHHHHHHHcCCEEEEECCcc-ccCc-
Confidence 4556777773 5899999999542 578899999999999885 58999999999999999999996 5432
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCC-------CC------------CCCCC-CCcHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVP-------GT------------HGSTY-GGNPLACK 148 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~-------~~------------~~~~~-~~~~~~~~ 148 (266)
.+... ...+|+++ +||+++++ .++|++++++++.+.+.. .. ....+ +.+++++.
T Consensus 204 -~~~~~--~~~~di~~~s~sK~l~~~-~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 279 (393)
T 1vjo_A 204 -PIFLD--AWGVDLAYSCSQKGLGCS-PGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYY 279 (393)
T ss_dssp -CCCTT--TTTCSEEECCSSSTTCSC-SSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHH
T ss_pred -CCccc--ccCccEEEEcCcccccCC-CceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHH
Confidence 22222 34566666 55999987 589999999988876632 11 02233 67888899
Q ss_pred HHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEe--cCccceeeEEEEeeCccchHHHHHHHHHHC-
Q psy6547 149 LAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSS--GGLKKSINTLILSVSAILEVYDVCIKMKDA- 222 (266)
Q Consensus 149 a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 222 (266)
++..+++.+.. +++.++++++++++.+.|++ ++..... ..+ .+. ++++.++. +.+..+++++|.++
T Consensus 280 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~~ 351 (393)
T 1vjo_A 280 ALREALRLIAQEGLANCWQRHQKNVEYLWERLED-IGLSLHV--EKEYRLPT---LTTVCIPD--GVDGKAVARRLLNEH 351 (393)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBSS--CGGGBCSS---EEEEECCT--TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-cCCcccC--CccccCCc---EEEEEcCC--CCCHHHHHHHHHhhC
Confidence 99999988654 35788899999999999988 5432222 111 234 78888764 45688999999988
Q ss_pred CceeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHH
Q psy6547 223 GLVTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTI 258 (266)
Q Consensus 223 gi~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~ 258 (266)
||.+.++ ..+++|+++ ++..+++++++++++|++++
T Consensus 352 gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 352 NIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp CEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred CEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 9999875 358999995 55678889999999999875
No 125
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.88 E-value=4.7e-22 Score=179.57 Aligned_cols=240 Identities=13% Similarity=0.046 Sum_probs=165.4
Q ss_pred cccCCCCCCceeecCC---------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHH-hcCCEEEEe
Q psy6547 11 NEFGPHMPGYNIIPYN---------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCS-QYNVLFIAD 80 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~---------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~-~~g~~li~D 80 (266)
..+...+.+++.++.+ |+++|++++ .+++++|+++.++|++|.+ ++.+.+++|+++|+ +||+++|+|
T Consensus 208 ~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l--~~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~la~~~~~~~li~D 284 (533)
T 3f6t_A 208 RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLK--DPSIKALIVVNPTNPTSKE-FDTNALNAIKQAVEKNPKLMIISD 284 (533)
T ss_dssp TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHS--CTTEEEEEEESSCTTTCBC-CCHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHh--CCCCeEEEEeCCCCCCccc-cCHHHHHHHHHHHHhCCCCEEEEc
Confidence 3344456677777753 799999998 4578999988778888876 89999999999999 689999999
Q ss_pred ccccCcCCcCcccccccCCCCcCeeeeccccc-CCchhhhhheecHH-----hhhcc-----------------------
Q psy6547 81 EVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GGLYPISAVLADDE-----VMGTL----------------------- 131 (266)
Q Consensus 81 e~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~-----~~~~~----------------------- 131 (266)
|+|.++...+........+....+.++||.++ +| +|+||++++++ +++.+
T Consensus 285 e~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~ 363 (533)
T 3f6t_A 285 EVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMK 363 (533)
T ss_dssp CTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCC
T ss_pred CCccccccCccCHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhh
Confidence 99987754332222112234566777999998 88 99999999776 44433
Q ss_pred ---------CCCCCCCCCCCcHHHHHH----HHHHHH------HHh--hccHHHHHHHHHHHHHHHhhcccccCCCcccE
Q psy6547 132 ---------VPGTHGSTYGGNPLACKL----AMTALD------VIL--EENMIENAYKMGEIFRSELSSPANKSKASFKL 190 (266)
Q Consensus 132 ---------~~~~~~~~~~~~~~~~~a----~~~~l~------~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 190 (266)
.......+.+.+++.+.+ +..+|. ... .+.++++++++++.+.+.|. ++ +....
T Consensus 364 ~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~--~~---~~~~~ 438 (533)
T 3f6t_A 364 FIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ--AP---KDETD 438 (533)
T ss_dssp HHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT--CC---CCCST
T ss_pred hHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC--CC---ccccC
Confidence 333455566677777666 333442 000 12356667777777777775 32 22212
Q ss_pred EecCccceeeEEEEeeCc----c----------chHHHHHHHHH-HCCceeccCC-----CCEEEEeccCCCCHHHHHHH
Q psy6547 191 SSGGLKKSINTLILSVSA----I----------LEVYDVCIKMK-DAGLVTKPIS-----NNIIRLSPALNITEQELREG 250 (266)
Q Consensus 191 ~~~g~~~~~~~~~~~~~~----~----------~~~~~~~~~l~-~~gi~~~~~~-----~~~iR~~~~~~~t~~~i~~~ 250 (266)
...|. ++|+.+..-. + .+..+++.+++ ++||.+.|+. .+++|+++. ..++++++++
T Consensus 439 ~~~g~---~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~ 514 (533)
T 3f6t_A 439 TNTHY---YSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALI 514 (533)
T ss_dssp TBCCS---EEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHH
T ss_pred CCceE---EEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHH
Confidence 34566 7777765300 0 24556766665 7899999862 589999964 3689999999
Q ss_pred HHHHHHHHHHHhh
Q psy6547 251 LDIIINTINTMAA 263 (266)
Q Consensus 251 ~~~l~~~~~~~~~ 263 (266)
+++|.+++++...
T Consensus 515 i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 515 GKQVLELLKEYYE 527 (533)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988643
No 126
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.88 E-value=2e-21 Score=169.36 Aligned_cols=220 Identities=12% Similarity=0.045 Sum_probs=160.5
Q ss_pred CCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 17 MPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 17 ~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+. ++++|.++|+++|+++|+||+|+ ++..
T Consensus 138 g~~v~~v~~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~-~g~~- 209 (406)
T 3cai_A 138 GAKVKWAEVDIETGELPTWQWESLI--SKSTRLVAVNSASGTLGGVT----DLRAMTKLVHDVGALVVVDHSAA-APYR- 209 (406)
T ss_dssp BCEEEEECCCTTTCCCCGGGHHHHC--CTTEEEEEEESBCTTTCBBC----CCHHHHHHHHHTTCEEEEECTTT-TTTC-
T ss_pred CCeEEEEecCcccCCcCHHHHHHHh--CCCceEEEEeCCcCCccccC----CHHHHHHHHHHcCCEEEEEcccc-cCCC-
Confidence 5678888876 899999999 45789999999999999886 58999999999999999999995 2211
Q ss_pred cccccccCCCCcCeeeecccccCCchhhh-hheecHHhhhccCCCCC---------CCCCCCcHHHHHHHHHHHHHHhh-
Q psy6547 91 KLLAIHYEDVRPDIVILGKALSGGLYPIS-AVLADDEVMGTLVPGTH---------GSTYGGNPLACKLAMTALDVILE- 159 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~sK~~~~g~~~~g-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~- 159 (266)
.+....++.+..+.+++|.++++ +| ++++++++.+.+..... ....+.++..++++.++++.+..
T Consensus 210 -~~~~~~~~~d~~~~s~~K~~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~ 285 (406)
T 3cai_A 210 -LLDIRETDADVVTVNAHAWGGPP---IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAAL 285 (406)
T ss_dssp -CCCHHHHCCSEEEEEGGGGTSCS---CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTS
T ss_pred -CCCchhcCCCEEEeehhhhcCCC---cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHh
Confidence 12223334333344478987643 88 99999988877765432 12345677777777778877654
Q ss_pred ----------------ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 160 ----------------ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 160 ----------------~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
+++.++++++++++.+.|++ +.. ..... ....+. ++++.++. .+..++++.|.++
T Consensus 286 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~~~~~~---~~~~~~~~---~~~~~~~~~L~~~ 357 (406)
T 3cai_A 286 DESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRS-LPLVMLIGR-PEAQIP---VVSFAVHK---VPADRVVQRLADN 357 (406)
T ss_dssp STTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTEEECCC-CSSBCS---EEEEEETT---BCHHHHHHHHHHT
T ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCC-ccccCC---EEEEEECC---cCHHHHHHHHHHC
Confidence 34667778888888888887 432 11111 111233 77777753 3578899999999
Q ss_pred CceeccCC-------------CCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 223 GLVTKPIS-------------NNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 223 gi~~~~~~-------------~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
||.++++. .+++|++++..++++++++++++|++
T Consensus 358 gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 358 GILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp TEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 99998753 37899999988999999999999875
No 127
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.88 E-value=5.4e-21 Score=167.13 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=163.7
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.+ .+++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.. ..
T Consensus 142 ~g~~~~~v~~~~~~~~d~~~l~~~l--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~a~~~~-~~- 213 (420)
T 1t3i_A 142 TGAVLKFVQLDEQESFDLEHFKTLL--SEKTKLVTVVHISNTLGCVN----PAEEIAQLAHQAGAKVLVDACQSAP-HY- 213 (420)
T ss_dssp HCCEEEEECBCTTSSBCHHHHHHHC--CTTEEEEEEESBCTTTCBBC----CHHHHHHHHHHTTCEEEEECTTTTT-TS-
T ss_pred cCcEEEEeccCCCCCcCHHHHHHhh--CCCceEEEEeCCcccccCcC----CHHHHHHHHHHcCCEEEEEhhhccC-Cc-
Confidence 3556777775 4799999999 44789999999999999886 5999999999999999999999632 21
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCCCCCC--------------------CCCCcHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGTHGS--------------------TYGGNPLACK 148 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 148 (266)
.+....++ +|+++ +||.+++ ..+|++++++++.+.+....... ..+.+++.+.
T Consensus 214 -~~~~~~~~--~di~~~s~sK~~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (420)
T 1t3i_A 214 -PLDVQLID--CDWLVASGHKMCAP--TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEA 288 (420)
T ss_dssp -CCCHHHHT--CSEEEEEGGGTTSC--TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHH
T ss_pred -cCchhhcC--CCEEEEehhhhcCC--CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHH
Confidence 11222233 55555 6696653 34899999999888876543221 1234555555
Q ss_pred HHHH-HHHHHhh---ccHHHHHHHHHHHHHHHhhcccc-cCCCcccEE---ecCccceeeEEEEeeCccchHHHHHHHHH
Q psy6547 149 LAMT-ALDVILE---ENMIENAYKMGEIFRSELSSPAN-KSKASFKLS---SGGLKKSINTLILSVSAILEVYDVCIKMK 220 (266)
Q Consensus 149 a~~~-~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (266)
++.. +++.+.. +++.++++++++++.+.|++ +. ...... .. +.|. ++++.++. .+..++++.|.
T Consensus 289 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~ 360 (420)
T 1t3i_A 289 IALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ-IPQLRLYGP-NPKHGDRAA---LASFNVAG---LHASDVATMVD 360 (420)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-CTTEEEESC-CGGGSCBCS---EEEEEETT---BCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeCC-CccccccCC---EEEEEECC---CCHHHHHHHHH
Confidence 5444 6777654 45788888999999999988 42 111111 10 1355 88887653 35778999999
Q ss_pred HCCceeccC-----------C-CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 221 DAGLVTKPI-----------S-NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 221 ~~gi~~~~~-----------~-~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++||.++++ + .+++|++++..++++++++++++|+++++.+
T Consensus 361 ~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 361 QDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp TTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999986 2 6799999998889999999999999998775
No 128
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.88 E-value=1.5e-21 Score=169.35 Aligned_cols=230 Identities=13% Similarity=0.088 Sum_probs=163.5
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.+++. ++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++..
T Consensus 116 ~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~v~~~~~~nptG~~~----~l~~i~~~~~~~~~~li~D~a~~-~~~~- 188 (393)
T 2huf_A 116 YGADVRVVKSKVGQSLSLDEIRDALLIH-KPSVLFLTQGDSSTGVLQ----GLEGVGALCHQHNCLLIVDTVAS-LGGA- 188 (393)
T ss_dssp TTCEEEEEECCTTCCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCTTHHHHHHHTTCEEEEECTTT-BTTB-
T ss_pred cCCeeEEEeCCCCCCCCHHHHHHHHhcc-CCcEEEEEccCCCccccC----CHHHHHHHHHHcCCEEEEEcccc-cCCC-
Confidence 3556777773 5899999999542 478889888999999885 48999999999999999999984 4321
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCCC-----------------------CCCCCCCcHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGT-----------------------HGSTYGGNPL 145 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 145 (266)
.+....+ .+|+++ +||+++|+ .++|++++++++.+.+.... .....+.+..
T Consensus 189 -~~~~~~~--~~d~~~~s~sK~l~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (393)
T 2huf_A 189 -PMFMDRW--EIDAMYTGSQKVLGAP-PGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISST 264 (393)
T ss_dssp -CCCTTTT--TCSEEECCSSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHH
T ss_pred -Ccchhhc--CccEEEECCCcccccC-CCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHH
Confidence 2222223 355555 67998754 44599999988877654320 0111245666
Q ss_pred HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 146 ACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 146 ~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
+++++.++++.+.. ++..++++++++++.+.|++ ++...+.......+. ++++.++. +.+..+++++|.++
T Consensus 265 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~L~~~ 338 (393)
T 2huf_A 265 LLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD-AGFELYADPKDRLST---VTTIKVPQ--GVDWLKAAQYAMKT 338 (393)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSCGGGBCTT---EEEEECCT--TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCeeccCccccCCc---EEEEEcCC--CCCHHHHHHHHHHh
Confidence 66677778877643 35778888999999999988 543222210001245 77788764 45678899999865
Q ss_pred -CceeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 223 -GLVTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 223 -gi~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
||.++++ ..+++|+++ +...+++++++++++|+++++++.
T Consensus 339 ~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 339 YLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp HCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 9999875 358999998 445689999999999999988764
No 129
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.88 E-value=5.4e-21 Score=165.09 Aligned_cols=226 Identities=16% Similarity=0.108 Sum_probs=163.2
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcC--CEEEEeccccCcCC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN--VLFIADEVQTGLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g--~~li~De~~~~~~~ 88 (266)
.+.+++.++. .|+++|++.++ +++++|++++++|++|.+. ++++|.++|++|| +++|+||+|+ ++.
T Consensus 112 ~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~~~li~Dea~~-~~~ 184 (384)
T 1eg5_A 112 KGFKVKYVPVDSRGVVKLEELEKLVD--EDTFLVSIMAANNEVGTIQ----PVEDVTRIVKKKNKETLVHVDAVQT-IGK 184 (384)
T ss_dssp TTCEEEECCBCTTSCBCHHHHHHHCC--TTEEEEEEESBCTTTCBBC----CHHHHHHHHHHHCTTCEEEEECTTT-TTT
T ss_pred cCCEEEEEccCCCCccCHHHHHHHhC--CCCeEEEEECCCCCccccc----CHHHHHHHHHhcCCceEEEEEhhhh-cCC
Confidence 4567777775 37999999993 4789999999999999886 5899999999999 9999999995 432
Q ss_pred cCcccccccCCCCcCeee--ecccccC-CchhhhhheecHHh--hhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhh-
Q psy6547 89 TGKLLAIHYEDVRPDIVI--LGKALSG-GLYPISAVLADDEV--MGTLVPG---THGSTYGGNPLACKLAMTALDVILE- 159 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~--~sK~~~~-g~~~~g~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~- 159 (266)
. .+.+..+ .+|+++ +||.++. | +|++++++++ .+.+... ....+++.+++.+.++.++++.+..
T Consensus 185 ~--~~~~~~~--~~di~~~s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 257 (384)
T 1eg5_A 185 I--PFSLEKL--EVDYASFSAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEE 257 (384)
T ss_dssp S--CCCCTTT--CCSEEEEEGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHT
T ss_pred c--ccCchhc--CCCEEEecHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHh
Confidence 2 2222222 456666 5598773 4 6999998875 2233221 1234567888888888888887543
Q ss_pred -ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--------
Q psy6547 160 -ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------- 230 (266)
Q Consensus 160 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------- 230 (266)
+++.++++++++++.+.|++ .+...........+. ++++.++. .+..++.+.|.++||.+.++.
T Consensus 258 ~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~~ 330 (384)
T 1eg5_A 258 LSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPN---TLSVSFPN---IRGSTLQNLLSGYGIYVSTSSACTSKDER 330 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTT---EEEEECTT---CCHHHHHHHHHHTTEECBC----------
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCC---EEEEEeCC---CCHHHHHHHHhhCCeEEeccccccCCCCc
Confidence 46788888899999999887 432111110001244 67777653 357889999999999998742
Q ss_pred ---------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 ---------------NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 ---------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++|++++..++++++++++++|+++++++.
T Consensus 331 ~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 331 LRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp --CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred chHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36899998888899999999999999988753
No 130
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.88 E-value=2.2e-22 Score=180.48 Aligned_cols=248 Identities=10% Similarity=0.048 Sum_probs=168.4
Q ss_pred CcCcccccCCCCCCceeec-------CCCHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcC
Q psy6547 6 DPTSYNEFGPHMPGYNIIP-------YNDVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN 74 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~-------~~d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g 74 (266)
++.....+...+.+++.++ ..|+++|++.+++. .++++|+++.++|++|.+ ++.+.+++|+++|++||
T Consensus 192 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~-~s~~~l~~i~~la~~~~ 270 (500)
T 3tcm_A 192 YPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQV-LAEENQYDIVKFCKNEG 270 (500)
T ss_dssp CTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHT
T ss_pred cHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCccc-CCHHHHHHHHHHHHHcC
Confidence 3334444555677888887 45899999999651 257888877778888877 89999999999999999
Q ss_pred CEEEEeccccCcCCcC--ccccc----ccCCC---Cc---Ceeeecccc-c-CCchhhhhhee---cHHhhhccCCCCCC
Q psy6547 75 VLFIADEVQTGLGRTG--KLLAI----HYEDV---RP---DIVILGKAL-S-GGLYPISAVLA---DDEVMGTLVPGTHG 137 (266)
Q Consensus 75 ~~li~De~~~~~~~~g--~~~~~----~~~~~---~~---d~~~~sK~~-~-~g~~~~g~~~~---~~~~~~~~~~~~~~ 137 (266)
+++|+||+|.++...+ ...++ ...+. .. .+.++||++ + +| +|+||+++ ++++.+.+.... .
T Consensus 271 ~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~-~ 348 (500)
T 3tcm_A 271 LVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIA-S 348 (500)
T ss_dssp CEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHH-H
T ss_pred CEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHH-h
Confidence 9999999997753322 11111 11111 11 223699999 5 68 99999987 788777665322 2
Q ss_pred CCCCCcHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEe
Q psy6547 138 STYGGNPLACKLAMTALD-----------VIL-EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILS 205 (266)
Q Consensus 138 ~~~~~~~~~~~a~~~~l~-----------~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (266)
..++++++++.++..+++ +.+ .+.+.++++++++++.+.|++ +. .+.......|+ +.|+.+.
T Consensus 349 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~--g~~~~~~~g~~---~~~~~~~ 422 (500)
T 3tcm_A 349 VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK-LE--GITCNEAEGAM---YVFPQIC 422 (500)
T ss_dssp TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-ST--TEECCCCCBTT---EECCEEC
T ss_pred cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CcEEecCCeEE---EEeeeec
Confidence 345677888888777764 222 245677888889999999988 52 23221233455 6664443
Q ss_pred eCcc---------c-hHHHHH-HHHHHCCceeccC-------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 206 VSAI---------L-EVYDVC-IKMKDAGLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 206 ~~~~---------~-~~~~~~-~~l~~~gi~~~~~-------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
.... . +...++ +.|.++||.+.|+ +.+++|+++. .+++++++++++|.+++++...+
T Consensus 423 lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 423 LPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp CCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 2101 1 123334 4456789999874 2357999966 89999999999999999876543
No 131
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.87 E-value=1.4e-21 Score=167.05 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=163.6
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCcCC
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADEVQTGLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~--g~~li~De~~~~~~~ 88 (266)
.+.+++.++.+ |+++|++ +++++|++++++|++|.+. ++++|.++|++| |+++|+||+|+ ++.
T Consensus 97 ~g~~~~~v~~~~~~~~d~~~l~~-----~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~~~li~D~a~~-~~~ 166 (352)
T 1iug_A 97 AGLVVERLDYPYGDTPRPEDVAK-----EGYAGLLLVHSETSTGALA----DLPALARAFKEKNPEGLVGADMVTS-LLV 166 (352)
T ss_dssp TTCEEEEEECCTTCCCCTTTSCC-----SSCSEEEEESEETTTTEEC----CHHHHHHHHHHHCTTCEEEEECTTT-BTT
T ss_pred cCCceEEEeCCCCCCCCHHHHhc-----cCCcEEEEEEecCCcceec----CHHHHHHHHHhhCCCCEEEEECCcc-ccC
Confidence 35566777653 5555544 4678899999999999886 589999999999 99999999995 432
Q ss_pred cCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCC-------------C-CCCCCCCCcHHHHHHHHHHH
Q psy6547 89 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-------------G-THGSTYGGNPLACKLAMTAL 154 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~a~~~~l 154 (266)
. .+....++.+..+.++||++.++ .++|++++++++.+.+.. . ......+.+...+.++.+++
T Consensus 167 ~--~~~~~~~~~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 243 (352)
T 1iug_A 167 G--EVALEAMGVDAAASGSQKGLMCP-PGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVL 243 (352)
T ss_dssp B--CCCSGGGTCSEEEEESSSTTCCC-SCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHH
T ss_pred c--ceeccccCeeEEEecCcccccCC-CceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHH
Confidence 1 12222233333334477988765 568999998887654221 0 12234566777888888888
Q ss_pred HHHhhc--cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC---
Q psy6547 155 DVILEE--NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI--- 229 (266)
Q Consensus 155 ~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--- 229 (266)
+.++.. ++.++++++++++.+.|++ ++...... . ..+. ++++.+++ +.+..+++++|.++||.+.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~-~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~ 315 (352)
T 1iug_A 244 EEVLPRLEEHLALKAWQNALLYGVGEE-GGLRPVPK-R-FSPA---VAAFYLPE--GVPYARVKEAFAQRGAVIAGGQGP 315 (352)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHH-TTCEESCS-S-BCTT---CEEEECCT--TCCHHHHHHHHHTTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCccccc-c-cCCe---EEEEEcCC--CCCHHHHHHHHHHCCEEEEeCCCc
Confidence 876653 6778888899999999987 43221111 1 2466 89998875 456889999999999999876
Q ss_pred -CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 230 -SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 230 -~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
..+++|++++..++++++++++++|+++++++.
T Consensus 316 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 316 LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 358999999988899999999999999988763
No 132
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.87 E-value=1.6e-21 Score=173.34 Aligned_cols=221 Identities=14% Similarity=0.148 Sum_probs=164.7
Q ss_pred CHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCee
Q psy6547 27 DVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 105 (266)
Q Consensus 27 d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~ 105 (266)
|+++|+++++++ +++++|++++++|++|.+. ++++|.++|++||+++|+|++|+ .+. ..+....++.+..+.
T Consensus 200 d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~----~l~~i~~la~~~g~~vi~D~a~~-~g~--~~~~~~~~~~D~~~~ 272 (465)
T 3e9k_A 200 RIEDILEVIEKEGDSIAVILFSGVHFYTGQHF----NIPAITKAGQAKGCYVGFDLAHA-VGN--VELYLHDWGVDFACW 272 (465)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEESBCTTTCBBC----CHHHHHHHHHHTTCEEEEECTTT-TTT--SCCCHHHHTCCEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEeCcccCcceee----cHHHHHHHHHHcCCEEEEEhhhh-cCC--cCCchhhcCCCEEEE
Confidence 799999999653 5799999999999999986 78999999999999999999995 221 122333445444455
Q ss_pred eecccccCCchhhhhheecHHhhhccCCCCCC---C----------------------CCCCcHHHHHHHHHHHHHHhh-
Q psy6547 106 ILGKALSGGLYPISAVLADDEVMGTLVPGTHG---S----------------------TYGGNPLACKLAMTALDVILE- 159 (266)
Q Consensus 106 ~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~---~----------------------~~~~~~~~~~a~~~~l~~~~~- 159 (266)
+++|++++|..++|++.+++++.+.+.+...+ . ..+++.+.+++..++++.++.
T Consensus 273 s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~ 352 (465)
T 3e9k_A 273 CSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA 352 (465)
T ss_dssp CSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc
Confidence 57899963315689999998887666532111 0 115677788888888887765
Q ss_pred --ccHHHHHHHHHHHHHHHhhccccc-------CCCcc----cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCcee
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANK-------SKASF----KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVT 226 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~-------~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 226 (266)
+++.+++.++++++.+.|++.+.. ..+.. .....|. +++|.++. +..++++.|.++||.+
T Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~---~~~~~~~~----~~~~l~~~L~~~Gi~v 425 (465)
T 3e9k_A 353 TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGC---QLTITFSV----PNKDVFQELEKRGVVC 425 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCS---CEEEEECC----TTCCHHHHHHTTTEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhccc---EEEEEecC----CHHHHHHHHHHCCEEE
Confidence 568888999999999999873210 11111 0122366 89998864 4567999999999999
Q ss_pred ccCCCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 227 KPISNNIIRLSP-ALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 227 ~~~~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
....++++|+++ +..+++++++++++.|++++++.
T Consensus 426 ~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 426 DKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp EEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 877789999998 89999999999999999998753
No 133
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.87 E-value=3.9e-23 Score=179.66 Aligned_cols=228 Identities=14% Similarity=0.086 Sum_probs=157.0
Q ss_pred cCCCCCCceeecC---C----CHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 13 FGPHMPGYNIIPY---N----DVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 13 ~~~~~~~v~~~~~---~----d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
+...+.+++.++. + |+++|++.+++.+ ++++++++.++|++|.+ ++.+++++|+++|++||+++|+||+|+
T Consensus 137 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~ 215 (396)
T 2q7w_A 137 FNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGID-PTLEQWQTLAQLSVEKGWLPLFDFAYQ 215 (396)
T ss_dssp HHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 3445677888887 4 7999999996532 46778888888888876 899999999999999999999999998
Q ss_pred CcCCcC--cccccccC----CCCcCeeeeccccc-CCchhhhhhee---cH----HhhhccCCCCCCCCCCCcHHHHHHH
Q psy6547 85 GLGRTG--KLLAIHYE----DVRPDIVILGKALS-GGLYPISAVLA---DD----EVMGTLVPGTHGSTYGGNPLACKLA 150 (266)
Q Consensus 85 ~~~~~g--~~~~~~~~----~~~~d~~~~sK~~~-~g~~~~g~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~a~ 150 (266)
++...+ ...+...+ .....+.++||.++ +| +|+||+++ ++ ++.+.+.........+++++++.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 294 (396)
T 2q7w_A 216 GFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVV 294 (396)
T ss_dssp TSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred cccCCccchhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHH
Confidence 875543 22222211 12233556999999 89 99999986 55 3444433211223334588888888
Q ss_pred HHHHHHH------h--hccHHHHHHHHHHHHHHHhhcccccC-CCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH
Q psy6547 151 MTALDVI------L--EENMIENAYKMGEIFRSELSSPANKS-KASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD 221 (266)
Q Consensus 151 ~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (266)
.++|+.. . -+++.++++++++++.+.|++ ++.. .+....+..|. ++|+.++ .+.+...|.+
T Consensus 295 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~l~~ 364 (396)
T 2q7w_A 295 ATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQE-KGANRDFSFIIKQNGM---FSFSGLT------KEQVLRLREE 364 (396)
T ss_dssp HHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH-TTCCSCCTHHHHCCSS---EEECCCC------HHHHHHHHHH
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcceecCCCce---EEEecCC------HHHHHHHHHh
Confidence 8887543 1 134566777888888888887 4421 13321223455 5555432 3456666778
Q ss_pred CCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 222 AGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 222 ~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
+||.+.++ +|++++.. +++++++++++|+++
T Consensus 365 ~gv~v~~~----~Ris~~~~-~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 365 FGVYAVAS----GRVNVAGM-TPDNMAPLCEAIVAV 395 (396)
T ss_dssp HCEECCTT----CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred cCeeecCC----ceEEEeec-CHHHHHHHHHHHHhc
Confidence 99999884 69998743 999999999999875
No 134
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.87 E-value=1.2e-21 Score=176.41 Aligned_cols=240 Identities=13% Similarity=0.043 Sum_probs=165.4
Q ss_pred cCcccccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 7 PTSYNEFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 7 ~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
+...+.+..++.+++.++.+ |+++|++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||
T Consensus 203 ~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 203 AAFDKAAQYFGIKLVRTPLDADYRADVAAMREAI--TPNTVVVAGSAPGYPHGVVD----PIPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp THHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHC--CTTEEEEEEETTCTTTCCCC----CHHHHHHHHHHHTCEEEEEC
T ss_pred hHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHh--ccCCEEEEEeCCCCCCcccc----CHHHHHHHHHHhCCeEEEec
Confidence 33334445567788899876 899999999 44789999999999999885 69999999999999999999
Q ss_pred cccCcC-----CcCc---ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC----CC-------CCCCCC
Q psy6547 82 VQTGLG-----RTGK---LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG----TH-------GSTYGG 142 (266)
Q Consensus 82 ~~~~~~-----~~g~---~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~----~~-------~~~~~~ 142 (266)
+|+++. ..|. .+.....+++....+++|++.+| .++|+++++.+........ .. ....+.
T Consensus 277 a~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~ 355 (514)
T 3mad_A 277 CLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGA-KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSR 355 (514)
T ss_dssp TTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCC-SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSC
T ss_pred ccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCC-CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCC
Confidence 998752 2232 23334445544455577998888 8899998877655432210 00 001122
Q ss_pred cHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHH
Q psy6547 143 NPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKM 219 (266)
Q Consensus 143 ~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 219 (266)
+.....+..++++.++. +++.+++.++++++.+.|++ +.. +.. ...... ++++... +.+..++.++|
T Consensus 356 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~g--~~~-~~~~~~---~~~~~~~---~~~~~~l~~~L 425 (514)
T 3mad_A 356 PGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA-IPS--LKI-LGDPLW---VIAVASD---ELNIYQVMEEM 425 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STT--CEE-SSCCSS---EEEEECS---SSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCC--eEE-eCCCeE---EEEEeCC---CCCHHHHHHHH
Confidence 23333444445554443 45788888899999999988 432 111 111133 6777653 34678999999
Q ss_pred HHCCceeccC-CCCEEEEecc-CCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 220 KDAGLVTKPI-SNNIIRLSPA-LNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 220 ~~~gi~~~~~-~~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.++||.+... .++.+|+++. ...+++++++++++|+++++++..
T Consensus 426 ~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 426 AGRGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HTTTCBCEEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEeccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999988432 3578999987 455679999999999999987653
No 135
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.87 E-value=9.1e-21 Score=166.09 Aligned_cols=224 Identities=14% Similarity=0.141 Sum_probs=163.5
Q ss_pred CCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 17 MPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 17 ~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+. ++++|+++|++||++||+||+|+. +..
T Consensus 137 g~~~~~v~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~Dea~~~-~~~-- 207 (423)
T 3lvm_A 137 GFEVTYLAPQRNGIIDLKELEAAM--RDDTILVSIMHVNNEIGVVQ----DIAAIGEMCRARGIIYHVDATQSV-GKL-- 207 (423)
T ss_dssp TCEEEEECCCTTSCCCHHHHHHHC--CTTEEEEECCSBCTTTCBBC----CHHHHHHHHHHHTCEEEEECTTTT-TTS--
T ss_pred CCEEEEeccCCCCccCHHHHHHhc--CCCcEEEEEeCCCCCCcccc----CHHHHHHHHHHcCCEEEEEhhhhc-CCC--
Confidence 6677888765 899999999 44789999999999999886 599999999999999999999953 111
Q ss_pred ccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCCCC-------CCCCCCcHHHHHHHHHHHHHHhh--c
Q psy6547 92 LLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGTH-------GSTYGGNPLACKLAMTALDVILE--E 160 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~--~ 160 (266)
.+... ...+|+++ +||.+++ .++|+++++++..+.+..... ....+.+...+.++.++++.+.. +
T Consensus 208 ~~~~~--~~~~di~~~s~sK~~g~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 283 (423)
T 3lvm_A 208 PIDLS--QLKVDLMSFSGHKIYGP--KGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMA 283 (423)
T ss_dssp CCCTT--TSCCSEEEEESTTTTSC--SSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcChh--hcCCCEEEechHHhcCC--CCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12222 33466666 5597653 458999998877776665432 33445677777777788877655 5
Q ss_pred cHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC---------
Q psy6547 161 NMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--------- 230 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--------- 230 (266)
++.++++++++++++.|++ +.. ..........+. ++.+.+. +.+..++.+.|.+ |.+.++.
T Consensus 284 ~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~ 354 (423)
T 3lvm_A 284 TEMERLRGLRNRLWNGIKD-IEEVYLNGDLEHGAPN---ILNVSFN---YVEGESLIMALKD--LAVSSGSACTSASLEP 354 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTT-STTEEEESCSTTBCTT---EEEEEET---TSCHHHHHHHTTT--EECBCCCC-----CCC
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCC---eEEEEeC---CCCHHHHHHHHhh--heeccCccccCCCccc
Confidence 6888888999999999987 421 111110111234 6666663 3467888888877 7776642
Q ss_pred --------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 --------------NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 --------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++|++++..++++++++++++|+++++++.
T Consensus 355 ~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 355 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLR 400 (423)
T ss_dssp CHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 38999999999999999999999999998764
No 136
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.87 E-value=1.1e-20 Score=162.73 Aligned_cols=227 Identities=12% Similarity=0.091 Sum_probs=161.9
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++.+ |+++|++.+ .++++++++++++|++|.+. ++++|.++|++||+ +|+|++|+ ++.
T Consensus 111 ~g~~~~~v~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~-li~D~a~~-~~~-- 180 (382)
T 4hvk_A 111 QGFEVEYIPVGKYGEVDVSFIDQKL--RDDTILVSVQHANNEIGTIQ----PVEEISEVLAGKAA-LHIDATAS-VGQ-- 180 (382)
T ss_dssp TTCEEEEECBCTTSCBCHHHHHHHC--CTTEEEEECCSBCTTTCBBC----CHHHHHHHHSSSSE-EEEECTTT-BTT--
T ss_pred cCCEEEEeccCCCCCcCHHHHHHHh--ccCceEEEEECCCCCceeeC----CHHHHHHHHHHcCE-EEEEhHHh-cCC--
Confidence 36677888765 899999999 45789999999999999886 68999999999999 99999994 221
Q ss_pred cccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCC-------CCCCCCcHHHHHHHHHHHHHHhh--cc
Q psy6547 91 KLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTH-------GSTYGGNPLACKLAMTALDVILE--EN 161 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~l~~~~~--~~ 161 (266)
..+.....+.+..+.+++|.++ + .++|+++++++. .+..... ....+.+...+.++.++++.... ++
T Consensus 181 ~~~~~~~~~~d~~~~s~~K~~g-~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 256 (382)
T 4hvk_A 181 IEVDVEKIGADMLTISSNDIYG-P-KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWRE 256 (382)
T ss_dssp BCCCHHHHTCSEEEEESGGGTS-C-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhcCCCEEEEeHHHhcC-C-CceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHH
Confidence 1122233344444455779765 2 347888776654 2332211 12445577777777777776543 56
Q ss_pred HHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----------
Q psy6547 162 MIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS---------- 230 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---------- 230 (266)
..++++++++++.+.|++ ++. ..........+. ++.+.++. .+..++.+.|.++||.++++.
T Consensus 257 ~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~ 329 (382)
T 4hvk_A 257 EAERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPN---NVNVRFSY---IEGESIVLSLDMAGIQASTGSACSSKTLQPS 329 (382)
T ss_dssp HHHHHHHHHHHHHHHHTT-STTEEECSCSSSBCTT---EEEEEETT---CCHHHHHHHHHHTTCBCBCC--------CCC
T ss_pred HHHHHHHHHHHHHHHHhc-CCCeEEeCCccccCCC---EEEEEECC---CCHHHHHHHHHHCCEEEeeCCccCCCCCcch
Confidence 788888999999999887 532 111110112234 67776643 467889999999999998753
Q ss_pred -------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 231 -------------NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 231 -------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.+++|++++..+|++++++++++|+++++++..
T Consensus 330 ~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 330 HVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 589999999899999999999999999988654
No 137
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.8e-21 Score=165.53 Aligned_cols=224 Identities=13% Similarity=0.054 Sum_probs=161.2
Q ss_pred CcCcccccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 6 DPTSYNEFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
++.....+...+.+++.++.+ |+++|++. .++++++++.++|++|.+. +++++.++|+++++ +|+|
T Consensus 100 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~----~~~~~v~i~~p~nptG~~~----~~~~l~~l~~~~~~-~ivD 170 (337)
T 3p1t_A 100 FDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV----SRDDCVVLANPSNPTGQAL----SAGELDQLRQRAGK-LLID 170 (337)
T ss_dssp CSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC----CTTEEEEEESSCTTTCCCC----CHHHHHHHHHHCSE-EEEE
T ss_pred cHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh----cCCCEEEEeCCCCCCCCCC----CHHHHHHHHHhCCc-EEEE
Confidence 333344556678888888844 67777755 2468888888889999886 66678888888987 5669
Q ss_pred ccccCcCCcCcccccccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q psy6547 81 EVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE 159 (266)
Q Consensus 81 e~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 159 (266)
|+|.+|+..+.. .....+....+.++||.++ +| +|+||+++++++.+.+... ...++.+++++.++..+++..+.
T Consensus 171 ea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~ 246 (337)
T 3p1t_A 171 ETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAG-LRLGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRA 246 (337)
T ss_dssp CTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTT-TCCEEEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTCHHH
T ss_pred CCChhhcccccc-ccccCCCEEEEeeCchhccCcc-hheEEEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCCHHH
Confidence 999877543332 1222234455667999998 89 9999999999998887653 34567788888888877764321
Q ss_pred -ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----CCEE
Q psy6547 160 -ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS----NNII 234 (266)
Q Consensus 160 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~i 234 (266)
++..+++.++++++.+.|++ ++ +.. ..+.|. ++++..++ ..++.+.|.++||.++++. .+++
T Consensus 247 ~~~~~~~~~~~~~~l~~~L~~-~g---~~~-~~~~~~---~~~~~~~~-----~~~~~~~l~~~gi~v~~g~~~~~~~~i 313 (337)
T 3p1t_A 247 REAHIAKTLAQRRRVADALRG-LG---YRV-ASSEAN---FVLVENAA-----GERTLRFLRERGIQVKDAGQFGLHHHI 313 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT---CCB-CCCSSS---EEEEECTT-----THHHHHHHHHTTEECEEGGGGTCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Cc---CEE-CCCCCe---EEEEEcCC-----HHHHHHHHHHCCeEEEECccCCCCCeE
Confidence 34556666777888888877 43 222 234566 88887654 3567888999999998763 5899
Q ss_pred EEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 235 RLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 235 R~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
|++++ ++++++++++.|+++.
T Consensus 314 Ris~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 314 RISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp EEECC---CHHHHHHHHHHHHHHT
T ss_pred EEecC---CHHHHHHHHHHHHHHh
Confidence 99944 7999999999998765
No 138
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.87 E-value=4.2e-21 Score=166.73 Aligned_cols=230 Identities=14% Similarity=0.072 Sum_probs=166.3
Q ss_pred CCCCceeec-----CCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIP-----YNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~-----~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++ ..|+++|++.++++ ++++|++++++|++|.+. ++++|.++|+++|+++|+||+|+ ++.
T Consensus 115 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~li~Dea~~-~g~-- 186 (396)
T 2ch1_A 115 YGADVRTIEGPPDRPFSLETLARAIELH-QPKCLFLTHGDSSSGLLQ----PLEGVGQICHQHDCLLIVDAVAS-LCG-- 186 (396)
T ss_dssp TTCEEEEEECCTTSCCCHHHHHHHHHHH-CCSEEEEESEETTTTEEC----CCTTHHHHHHHTTCEEEEECTTT-BTT--
T ss_pred cCCceEEecCCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCceec----CHHHHHHHHHHcCCEEEEEcccc-ccC--
Confidence 456677777 35899999999542 478888888889999885 48999999999999999999995 432
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCC-----------------------CCCCCCCCcHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPG-----------------------THGSTYGGNPL 145 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 145 (266)
..+.... ..+|+++ ++|+++++ .++|++++++++++.+... ......+.+..
T Consensus 187 ~~~~~~~--~~~d~~~~s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
T 2ch1_A 187 VPFYMDK--WEIDAVYTGAQKVLGAP-PGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASN 263 (396)
T ss_dssp BCCCTTT--TTCCEEECCCC-CCCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHH
T ss_pred Cccchhh--cCcCEEEEcCCccccCC-CCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHH
Confidence 1222222 3456666 55999876 6779999988877655321 01223456777
Q ss_pred HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccE-EecCccceeeEEEEeeCccchHHHHHHHHHH
Q psy6547 146 ACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKL-SSGGLKKSINTLILSVSAILEVYDVCIKMKD 221 (266)
Q Consensus 146 ~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (266)
++.++.++++.+.. ++..++++++++++.+.|++ ++...+.... ...+. ++++.++. +.+..+++++|.+
T Consensus 264 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~L~~ 337 (396)
T 2ch1_A 264 LIFALREALAQIAEEGLENQIKRRIECAQILYEGLGK-MGLDIFVKDPRHRLPT---VTGIMIPK--GVDWWKVSQYAMN 337 (396)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HTCCBSSCSGGGBCTT---EEEEECCT--TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-CCCeeccCCccccCCc---eEEEEcCC--CCCHHHHHHHHHH
Confidence 78888888887643 35778888999999999988 5432222100 11244 78888764 4578899999987
Q ss_pred C-CceeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 222 A-GLVTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 222 ~-gi~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+ ||.++++ ..+++|+++ ++..+++++++++++|+++++++.
T Consensus 338 ~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 338 NFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp HHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred hCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 5 9999875 458999998 556799999999999999998763
No 139
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.87 E-value=5.6e-22 Score=177.73 Aligned_cols=247 Identities=12% Similarity=0.085 Sum_probs=169.0
Q ss_pred CcCcccccCCCCCCceeecCC-------CHHHHHHHHhcCC---CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCC
Q psy6547 6 DPTSYNEFGPHMPGYNIIPYN-------DVDALEAKLKSNP---NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNV 75 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~~-------d~~~l~~~l~~~~---~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~ 75 (266)
+|.....+..++.+++.++.+ |+++|++.+++.+ ++++|+++.++|++|.+ ++.+.+++|+++|++||+
T Consensus 191 y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v-~s~~~l~~i~~la~~~~~ 269 (498)
T 3ihj_A 191 YPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQV-QSRKCIEDVIHFAWEEKL 269 (498)
T ss_dssp CTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTC
T ss_pred chhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCc
Confidence 343344455567788888865 8999999996532 48888888778888877 899999999999999999
Q ss_pred EEEEeccccCcCCcC--ccccccc----C------CC-CcCeeeecccc-c-CCchhhhhhe---ecHHhhhccCCCCCC
Q psy6547 76 LFIADEVQTGLGRTG--KLLAIHY----E------DV-RPDIVILGKAL-S-GGLYPISAVL---ADDEVMGTLVPGTHG 137 (266)
Q Consensus 76 ~li~De~~~~~~~~g--~~~~~~~----~------~~-~~d~~~~sK~~-~-~g~~~~g~~~---~~~~~~~~~~~~~~~ 137 (266)
+||+||+|..+...+ ...++.. . .+ ...+.++||.+ | +| +|+||++ .++++.+.+.... .
T Consensus 270 ~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~~-~ 347 (498)
T 3ihj_A 270 FLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVKLL-S 347 (498)
T ss_dssp EEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHHH-H
T ss_pred EEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcc-cceEEEEEecCCHHHHHHHHHHH-h
Confidence 999999997753322 1112111 0 11 12345699999 5 79 9999998 5888877765422 2
Q ss_pred CCCCCcHHHHHHHHHHHH-----------HHh-hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEe
Q psy6547 138 STYGGNPLACKLAMTALD-----------VIL-EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILS 205 (266)
Q Consensus 138 ~~~~~~~~~~~a~~~~l~-----------~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (266)
...+++.+++.++..+++ +++ .+.+.++++++++++.+.|++ +. .+.......|+ ++|+.+.
T Consensus 348 ~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~--g~~~~~p~gg~---~~~~~l~ 421 (498)
T 3ihj_A 348 VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ-VP--GIHCNPLQGAM---YAFPRIF 421 (498)
T ss_dssp HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT-ST--TEECCCCCBSS---EECCEEC
T ss_pred ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CcEecCCCeEE---EEEEecc
Confidence 344567777777766653 222 134667888889999999988 52 23221233466 6665554
Q ss_pred eCc---------cchHHHH-HH-HHHHCCceeccC-------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 206 VSA---------ILEVYDV-CI-KMKDAGLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 206 ~~~---------~~~~~~~-~~-~l~~~gi~~~~~-------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
... +.+..++ +. .|.++||.+.|+ +.+++|+++ ..+++++++++++|.+++++...
T Consensus 422 ~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 422 IPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp CCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 210 1233443 44 456789999874 245899995 48999999999999999988654
No 140
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=1.9e-22 Score=176.40 Aligned_cols=238 Identities=12% Similarity=0.043 Sum_probs=164.0
Q ss_pred CcCcccccCCCCCCceeecC-------CCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEE
Q psy6547 6 DPTSYNEFGPHMPGYNIIPY-------NDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 6 ~~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
++.....+...+.+++.++. .|+++|++.+++++ ..+++++..++|++|.+ ++.+.+++|+++|++||+++
T Consensus 134 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~-~~~~~l~~l~~~~~~~~~~l 212 (412)
T 1yaa_A 134 WANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLD-PTSEQWVQIVDAIASKNHIA 212 (412)
T ss_dssp CTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEE
T ss_pred CccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEE
Confidence 33333444556788888887 27999999996543 34555557788888876 89999999999999999999
Q ss_pred EEeccccCcCCcC---ccccc---ccCC----CCcCeeeecccccC-Cchhhhhhe--e-----cHH----hhhccCCCC
Q psy6547 78 IADEVQTGLGRTG---KLLAI---HYED----VRPDIVILGKALSG-GLYPISAVL--A-----DDE----VMGTLVPGT 135 (266)
Q Consensus 78 i~De~~~~~~~~g---~~~~~---~~~~----~~~d~~~~sK~~~~-g~~~~g~~~--~-----~~~----~~~~~~~~~ 135 (266)
|+||+|.++...+ ..... ...+ ....+.++||.+++ | +|+||++ + +++ +.+.+....
T Consensus 213 i~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~~~ 291 (412)
T 1yaa_A 213 LFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAKII 291 (412)
T ss_dssp EEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHHHH
T ss_pred EEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 9999998875443 21122 1111 22335569999996 8 9999998 6 555 666555322
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHhhcccccC-CCcccEEecCccceeeEEEEee
Q psy6547 136 HGSTYGGNPLACKLAMTALDVIL--------EENMIENAYKMGEIFRSELSSPANKS-KASFKLSSGGLKKSINTLILSV 206 (266)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~ 206 (266)
.....+++++++.++..+|+... .+++.++++++++++.+.|++ ++.. .+....+..|. ++|+.+
T Consensus 292 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~-- 365 (412)
T 1yaa_A 292 RSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVK-LGTPGNWDHIVNQCGM---FSFTGL-- 365 (412)
T ss_dssp HTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCSSCCTHHHHCCSS---EEECCC--
T ss_pred hhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCeeeeccCceE---EEeeCC--
Confidence 33444557888888888887542 245677888888889888887 5421 12221223345 544422
Q ss_pred CccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 207 SAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 207 ~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+...+...+.++||.+.+ ++|++++. .+++++++++++|+++++.
T Consensus 366 ----~~~~~~~~l~~~gi~v~~----~~Ris~~~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 366 ----TPQMVKRLEETHAVYLVA----SGRASIAG-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ----CHHHHHHHHHHHCEECCT----TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHhCCEEecc----CcEEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence 345565555688999987 47999774 5999999999999998864
No 141
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=1.1e-22 Score=176.89 Aligned_cols=227 Identities=14% Similarity=0.053 Sum_probs=157.7
Q ss_pred CCCCCCceeecC---C----CHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 14 GPHMPGYNIIPY---N----DVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 14 ~~~~~~v~~~~~---~----d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
...+.+++.++. + |+++|++.+++++ +++++++++++|++|.+ ++.+.+++|+++|++||+++|+||+|++
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 213 (394)
T 2ay1_A 135 NFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGAN-LTLDQWAEIASILEKTGALPLIDLAYQG 213 (394)
T ss_dssp HHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEECCTT
T ss_pred HHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecCccc
Confidence 334667788876 3 7999999996542 46777778888888876 8999999999999999999999999988
Q ss_pred cCCcC--cccccc---cCC-CCcCeeeeccccc-CCchhhhhhee---cHHhhhc----cCCCCCCCCCCCcHHHHHHHH
Q psy6547 86 LGRTG--KLLAIH---YED-VRPDIVILGKALS-GGLYPISAVLA---DDEVMGT----LVPGTHGSTYGGNPLACKLAM 151 (266)
Q Consensus 86 ~~~~g--~~~~~~---~~~-~~~d~~~~sK~~~-~g~~~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~a~~ 151 (266)
+...| ...... ..+ ....+.++||+++ +| +|+||+++ ++++++. +.........++++++++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ 292 (394)
T 2ay1_A 214 FGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVS 292 (394)
T ss_dssp SSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHH
T ss_pred cccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHH
Confidence 86543 111221 111 1223446999999 88 99999987 5654332 221111223334788888888
Q ss_pred HHHHHH--------hhccHHHHHHHHHHHHHHHhhcccccC-CCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 152 TALDVI--------LEENMIENAYKMGEIFRSELSSPANKS-KASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 152 ~~l~~~--------~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
++|+.. ..+++.++++++++++.+.|++ ++.. .+....+..|+ ++|+.++ .+.+...|.++
T Consensus 293 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~---~~~~~~~------~~~~~~~l~~~ 362 (394)
T 2ay1_A 293 TVLTTPELRADWMAELEAVRSGMLRLREQLAGELRD-LSGSDRFGFVAEHRGM---FSRLGAT------PEQVKRIKEEF 362 (394)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTSSTTTHHHHCCSS---EEECCCC------HHHHHHHHHHH
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCeeEEcCCceE---EEeeCCC------HHHHHHHHHhC
Confidence 888644 1245677888888888888887 4421 23221223466 6665442 24566777799
Q ss_pred CceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 223 GLVTKPISNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 223 gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
||.+.++ +|++++ .++++++++++++|+++
T Consensus 363 gi~v~~~----~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 363 GIYMVGD----SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp CEECCTT----CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred CEEecCC----CeEEee-cCCHhhHHHHHHHHHHc
Confidence 9999885 599977 47999999999999875
No 142
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.87 E-value=6.6e-22 Score=169.30 Aligned_cols=227 Identities=11% Similarity=0.063 Sum_probs=162.5
Q ss_pred ccCCCCCCceeecC-CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 12 EFGPHMPGYNIIPY-NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 12 ~~~~~~~~v~~~~~-~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+...+.+++.++. ++.+.+. .+++++++++.++|++|.+ ++.+.+++|++.|+++ ++|+||+|.++...+
T Consensus 105 ~~~~~g~~~~~v~~~~~~~~~~-----~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~ 176 (350)
T 3fkd_A 105 ACRMYEHEVCFYPSNEDIGEAD-----FSNMDFCWLCNPNNPDGRL-LQRTEILRLLNDHPDT--TFVLDQSYVSFTTEE 176 (350)
T ss_dssp HHHHTTCEEEEEETTSCGGGSC-----CTTCSEEEEESSCTTTCCC-CCHHHHHHHHHHCTTS--EEEEECTTTTSCSSC
T ss_pred HHHHcCCeEEEEecCCccccCc-----cCCCCEEEEeCCCCCcCCC-CCHHHHHHHHHhCCCC--EEEEECchhhhccCc
Confidence 34456778888887 5433221 1467888888888889987 6777777777776654 999999998876554
Q ss_pred ccc--ccccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh--hccHHHH
Q psy6547 91 KLL--AIHYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENMIEN 165 (266)
Q Consensus 91 ~~~--~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~ 165 (266)
... ..+..+....+.++||.++ +| +|+||+++++++.+.+... ..+++.+++++.++..+|+... .+.+.+.
T Consensus 177 ~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 253 (350)
T 3fkd_A 177 VIRPADIKGRKNLVMVYSFSHAYGIPG-LRIGYIVANKDFMKRVAAF--STPWAVNALAIEAAKFILIHPAQFTLPIRKW 253 (350)
T ss_dssp CCCGGGGTTCSSEEEEEESHHHHSCGG-GCCEEEECCHHHHHHHHTT--CCTTCSCHHHHHHHHHHHHCTTTTCCCHHHH
T ss_pred chhhHHhhcCCCEEEEecCchhccCcc-hheEeEEeCHHHHHHHHHh--CCCCCCCHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 422 2223334455667999999 88 9999999999998888753 3456789999999988887544 1334444
Q ss_pred HHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHH-CCceeccCC------CCEEEEec
Q psy6547 166 AYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKD-AGLVTKPIS------NNIIRLSP 238 (266)
Q Consensus 166 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~------~~~iR~~~ 238 (266)
. ++++++.+.|++ ++ .+.. .++.|. ++++.++. . ++.+++++|.+ +||.++++. .+++|+++
T Consensus 254 ~-~~~~~l~~~L~~-~~--~~~~-~~~~~~---~~~~~~~~--~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~ 322 (350)
T 3fkd_A 254 Q-RNTVDFITALNR-LD--GVEV-HPSGTT---FFLLRLKK--G-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITT 322 (350)
T ss_dssp H-HHHHHHHHHHHH-ST--TEEE-CCCSSS---EEEEEESS--S-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEEC
T ss_pred H-HHHHHHHHHHhc-CC--CcEE-CCCCCc---EEEEECCC--C-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEc
Confidence 4 778888888877 42 2322 334566 88888876 3 68899999998 999998752 68999994
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 239 ALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 239 ~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+ ++++++++++.|++..++..+
T Consensus 323 ~---~~~~~~~l~~al~~~~~~~~~ 344 (350)
T 3fkd_A 323 Q---RPAQNQLFIKALETFLEKYEG 344 (350)
T ss_dssp C---CHHHHHHHHHHHHHHHTC---
T ss_pred C---CHHHHHHHHHHHHHHHHHhcc
Confidence 3 889999999999998876544
No 143
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.86 E-value=7.2e-22 Score=173.35 Aligned_cols=232 Identities=14% Similarity=0.095 Sum_probs=161.7
Q ss_pred ccccCCCCCCceeecC----C---CHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 10 YNEFGPHMPGYNIIPY----N---DVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 10 ~~~~~~~~~~v~~~~~----~---d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
...+...+.+++.+++ + |+++|++.+++. ++++++++++++|++|.+ ++.+.+++|+++|++||+++|+||
T Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De 235 (420)
T 4f4e_A 157 RALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVD-LNDAQWAQVVEVVKARRLVPFLDI 235 (420)
T ss_dssp HHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcc
Confidence 3345556788888887 3 799999999653 468899999999999977 899999999999999999999999
Q ss_pred cccCcCCcCc--cccc----ccCCCCcCeeeeccccc-CCchhhhhhee---cHHhhhcc----CCCCCCCCCCCcHHHH
Q psy6547 82 VQTGLGRTGK--LLAI----HYEDVRPDIVILGKALS-GGLYPISAVLA---DDEVMGTL----VPGTHGSTYGGNPLAC 147 (266)
Q Consensus 82 ~~~~~~~~g~--~~~~----~~~~~~~d~~~~sK~~~-~g~~~~g~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~ 147 (266)
+|.++...+. .... ...+....+.++||.++ +| +|+||+++ ++++++.+ .......+.+++.+++
T Consensus 236 ~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
T 4f4e_A 236 AYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGG 314 (420)
T ss_dssp SCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHH
T ss_pred ccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHH
Confidence 9988755431 1111 12233444556999999 79 99999863 45544332 2111233444566777
Q ss_pred HHHHHHHHHH------h--hccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHH
Q psy6547 148 KLAMTALDVI------L--EENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIK 218 (266)
Q Consensus 148 ~a~~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (266)
.++..+++.. . -+++.++++++++.+.+.|++ +.. ..+....+..|+ ++|+.+ +.+.+.+.
T Consensus 315 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~g~---~~~~~~------~~~~~~~~ 384 (420)
T 4f4e_A 315 AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA-AGIERDFSFINAQRGM---FSYSGL------TSAQVDRL 384 (420)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCSSCCTHHHHSCSS---EEECCC------CHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCceeECCCccE---EEEeCC------CHHHHHHH
Confidence 7766666532 1 145678888888999999887 432 233331234566 665444 34566777
Q ss_pred HHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 219 MKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 219 l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
|.++||.+.+++ |+++. ..+++++++++++|++++
T Consensus 385 l~~~gI~v~~~~----Ris~~-~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 385 REEFGIYAVSTG----RICVA-ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp HHHHCEECCTTS----EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred HHhCCEEecCCC----eEEEe-cCCHHHHHHHHHHHHHHh
Confidence 789999999863 99875 347778999999999875
No 144
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.86 E-value=8.3e-22 Score=171.34 Aligned_cols=230 Identities=15% Similarity=0.114 Sum_probs=159.1
Q ss_pred cccCCCCCCceeecC----C---CHHHHHHHHhcC-CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy6547 11 NEFGPHMPGYNIIPY----N---DVDALEAKLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEV 82 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~----~---d~~~l~~~l~~~-~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~ 82 (266)
..+...+.+++.+++ + |+++|++.++++ ++++++++++++|++|.+ ++.+.+++|+++|++||+++|+||+
T Consensus 136 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~ 214 (397)
T 3fsl_A 136 AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGAD-LTNDQWDAVIEILKARELIPFLDIA 214 (397)
T ss_dssp HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHhCCEEEEEecC
Confidence 334556788899987 3 899999999653 467888888889989876 8999999999999999999999999
Q ss_pred ccCcCCcC--cccc---c-ccCCCCcCeeeeccccc-CCchhhhhhee---cHHhhhccCCC----CCCCCCCCcHHHHH
Q psy6547 83 QTGLGRTG--KLLA---I-HYEDVRPDIVILGKALS-GGLYPISAVLA---DDEVMGTLVPG----THGSTYGGNPLACK 148 (266)
Q Consensus 83 ~~~~~~~g--~~~~---~-~~~~~~~d~~~~sK~~~-~g~~~~g~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~ 148 (266)
|.++...+ .... + ...+....+.++||.++ +| +|+||+++ ++++++.+... ....+.+++.+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 3fsl_A 215 YQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQ 293 (397)
T ss_dssp CTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHH
T ss_pred chhhccCcccccHHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHH
Confidence 98875432 1111 1 22334455666999999 78 99999864 44444332211 11233444666776
Q ss_pred HHHHHHHHH------h--hccHHHHHHHHHHHHHHHhhcccccC-CCcccEEecCccceeeEEEEeeCccchHHHHHHHH
Q psy6547 149 LAMTALDVI------L--EENMIENAYKMGEIFRSELSSPANKS-KASFKLSSGGLKKSINTLILSVSAILEVYDVCIKM 219 (266)
Q Consensus 149 a~~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 219 (266)
++..+++.. . .+++.++++++++++.+.|++ +... .+....+..|. ++|+.+ +.+.+...|
T Consensus 294 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~l 363 (397)
T 3fsl_A 294 VVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST-EMPERNFDYLLNQRGM---FSYTGL------SAAQVDRLR 363 (397)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCTTSCCTHHHHCCSS---EEECCC------CHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCceeecCCceE---EEecCC------CHHHHHHHH
Confidence 666655421 1 245678888888999999887 4321 23321233466 666544 235567777
Q ss_pred HHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 220 KDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 220 ~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
.++||.+.+++ |+++. ..+++++++++++|+++
T Consensus 364 ~~~gi~v~~g~----Ris~~-~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 364 EEFGVYLIASG----RMCVA-GLNTANVQRVAKAFAAV 396 (397)
T ss_dssp HTTCEECCTTC----EEEGG-GCCTTTHHHHHHHHHHH
T ss_pred HhCCEEECCCC----eEEEE-ecCHhhHHHHHHHHHhh
Confidence 88999999875 88875 33678899999999875
No 145
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.86 E-value=5.5e-22 Score=173.22 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=161.1
Q ss_pred CCcCcccccCCCCCCceeecCC-------CHHHHHHHHhcCCCEEEEEEccc-cCCCCcccCChHHHHHHHHHHHhcCCE
Q psy6547 5 TDPTSYNEFGPHMPGYNIIPYN-------DVDALEAKLKSNPNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVL 76 (266)
Q Consensus 5 ~~~~~~~~~~~~~~~v~~~~~~-------d~~~l~~~l~~~~~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~~~g~~ 76 (266)
+++.....+...+.+++.++.. |+++|++.+++.++.++++++++ +|++|.+ ++.+.+++|+++|++||++
T Consensus 131 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~-~s~~~~~~l~~~~~~~~~~ 209 (405)
T 3k7y_A 131 PYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVN-IEEKYFDEIIEIVLHKKHV 209 (405)
T ss_dssp CCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHCCE
T ss_pred CCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCeE
Confidence 4455555667788888888751 78999999966556678888775 7888877 9999999999999999999
Q ss_pred EEEeccccCcCCcCc---ccc---c-ccCCCCcCeeeeccccc-CCchhhhhhee---cHHhhhccC----CCCCCCCCC
Q psy6547 77 FIADEVQTGLGRTGK---LLA---I-HYEDVRPDIVILGKALS-GGLYPISAVLA---DDEVMGTLV----PGTHGSTYG 141 (266)
Q Consensus 77 li~De~~~~~~~~g~---~~~---~-~~~~~~~d~~~~sK~~~-~g~~~~g~~~~---~~~~~~~~~----~~~~~~~~~ 141 (266)
+|+||+|.+|...+. ... + ........+.+|||.++ +| +|+||+++ ++++.+.+. .........
T Consensus 210 vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 288 (405)
T 3k7y_A 210 IIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYG-ERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSS 288 (405)
T ss_dssp EEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTT-TTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSS
T ss_pred EEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 999999988753221 111 1 11122334456999999 89 99999853 555544332 111122223
Q ss_pred CcHHHHHHHHHHHHHH------hh--ccHHHHHHHHHHHHHHHhh----ccccc-CCCcccEEecCccceeeEEEEeeCc
Q psy6547 142 GNPLACKLAMTALDVI------LE--ENMIENAYKMGEIFRSELS----SPANK-SKASFKLSSGGLKKSINTLILSVSA 208 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~------~~--~~~~~~~~~~~~~l~~~l~----~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 208 (266)
.+.+++.++..+++.- .. ..++++++++++.+.+.|+ + ++. ..+....+..|+ |+|+.++.
T Consensus 289 ~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~-~g~~~~~~~~~p~gg~---f~~~~l~~-- 362 (405)
T 3k7y_A 289 PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKK-YNLNYDWNVYKKQRGL---FSFVPLLA-- 362 (405)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-GTCCCCGGGGSSCCSS---EEECGGGG--
T ss_pred CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCccccCCceE---EEecCCCH--
Confidence 4567777776666531 11 2456668888889999988 6 542 122321334566 66654422
Q ss_pred cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 209 ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 209 ~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+++++|.++||.+.|++ |++.. ..+++++++++++|.++++.
T Consensus 363 -----~~~~~L~~~gV~v~p~~----Ris~a-~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 363 -----KIAEHLKTHHIYIINNG----RINVS-GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -----GGTTTTTTTTEECCTTS----EEEGG-GCCTTHHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHCCEeecCCC----eEEEe-ccCHHHHHHHHHHHHHHHhh
Confidence 34566778899999964 99854 34788999999999998753
No 146
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.85 E-value=4.8e-20 Score=159.14 Aligned_cols=229 Identities=12% Similarity=0.103 Sum_probs=159.8
Q ss_pred CCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++. .|+++|++.++ +++++|++++++|++|.+. ++++|.++|++||++ |+||+|+ ++..
T Consensus 111 ~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~-i~D~a~~-~g~~- 181 (382)
T 4eb5_A 111 QGFEVEYIPVGKYGEVDVSFIDQKLR--DDTILVSVQHANNEIGTIQ----PVEEISEVLAGKAAL-HIDATAS-VGQI- 181 (382)
T ss_dssp TTCEEEEECBCTTSCBCHHHHHHHCC--TTEEEEECCSBCTTTCBBC----CHHHHHHHHTTSSEE-EEECTTT-BTTB-
T ss_pred CCcEEEEeccCCCCccCHHHHHHHhc--CCCeEEEEeccCCCccccC----CHHHHHHHHHHCCCE-EEEcchh-cCCc-
Confidence 5667888876 38999999993 4689999999999999886 589999999999999 9999995 4321
Q ss_pred cccccccCCCCcCeeeecccccCCchhhhhheecHHh-hhccCCC----CCCCCCCCcHHHHHHHHHHHHHHhh--ccHH
Q psy6547 91 KLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEV-MGTLVPG----THGSTYGGNPLACKLAMTALDVILE--ENMI 163 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~ 163 (266)
.+....++.+.-+.++||.++. .++|+++++++. ++..... ......+.+...+.++.++++.+.+ +++.
T Consensus 182 -~~~~~~~~~di~~~s~sK~~g~--~g~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 258 (382)
T 4eb5_A 182 -EVDVEKIGADMLTISSNDIYGP--KGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEA 258 (382)
T ss_dssp -CCCHHHHTCSEEEEETGGGTCC--SSCEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccCccccCCCEEEeehHHhcCC--CceEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHH
Confidence 1222222333333447898663 237888887763 2211110 1122345566667777777776654 4577
Q ss_pred HHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC------------
Q psy6547 164 ENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS------------ 230 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------ 230 (266)
++++++++++.+.|++ +.. ..........+. ++++.++. .+..+++++|.++||.+.++.
T Consensus 259 ~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~ 331 (382)
T 4eb5_A 259 ERLRRLRDRIIDNVLK-IEESYLNGHPEKRLPN---NVNVRFSY---IEGESIVLSLDMAGIQASTGSACSSKTLQPSHV 331 (382)
T ss_dssp HHHHHHHHHHHHHHTT-STTEEECSCSSSBCTT---EEEEEETT---SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHH
T ss_pred HHHHHHHHHHHHHHhh-CCCeEEeCCcccCCCC---EEEEEeCC---cCHHHHHHHHHHCCEEEeccccccCCCCcccHH
Confidence 8888889999999887 421 111110001255 77887753 357889999999999998753
Q ss_pred -----------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 231 -----------NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 231 -----------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
.+++|++++..++++++++++++|+++++++..
T Consensus 332 ~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 332 LMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 479999988888999999999999999887654
No 147
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.85 E-value=1.1e-21 Score=173.62 Aligned_cols=230 Identities=11% Similarity=0.106 Sum_probs=158.5
Q ss_pred CCCCCceeecC---C-----CHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 15 PHMPGYNIIPY---N-----DVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 15 ~~~~~v~~~~~---~-----d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
..+.+++.+++ + |+++|++.+++.+ ++++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+|.+
T Consensus 168 ~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~ 246 (448)
T 3meb_A 168 KLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQG 246 (448)
T ss_dssp TTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred hCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEeccccc
Confidence 67788888886 2 7899999997543 57787888888989977 8999999999999999999999999988
Q ss_pred cCCcCc---ccccccC-CCCcC---eeeeccccc-CCchhhhhh--ee--------c-H----HhhhccCCCCCCCCCCC
Q psy6547 86 LGRTGK---LLAIHYE-DVRPD---IVILGKALS-GGLYPISAV--LA--------D-D----EVMGTLVPGTHGSTYGG 142 (266)
Q Consensus 86 ~~~~g~---~~~~~~~-~~~~d---~~~~sK~~~-~g~~~~g~~--~~--------~-~----~~~~~~~~~~~~~~~~~ 142 (266)
|+..+. ......+ +...+ +.++||.++ +| +|+||+ ++ . + ++.+.+.......+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 325 (448)
T 3meb_A 247 FATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYG-ERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMS 325 (448)
T ss_dssp TSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred ccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcc-ccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCc
Confidence 865431 1111111 11233 556999999 78 999997 55 3 4 45554443233445556
Q ss_pred cHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHhhcccccCC------CcccEEecCccceeeEEEEeeCc
Q psy6547 143 NPLACKLAMTALDVIL--------EENMIENAYKMGEIFRSELSSPANKSK------ASFKLSSGGLKKSINTLILSVSA 208 (266)
Q Consensus 143 ~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~ 208 (266)
+.+++.++..+|+... -+++.++++++++++.+.|++ ++.+. +....+..|+ +.|..+
T Consensus 326 ~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~~~~~~~~~g~---~~~~~~---- 397 (448)
T 3meb_A 326 AIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAK-RKTPGPGSKGTWDHILTAIGM---FTFTGL---- 397 (448)
T ss_dssp CHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCSTTTCCCTHHHHCCSS---EEECCC----
T ss_pred cHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCcCcccccceeCCCceE---EEecCC----
Confidence 7778877777764321 145677788888888888887 53222 3221223444 444333
Q ss_pred cchHHHHHHHH-HHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 209 ILEVYDVCIKM-KDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 209 ~~~~~~~~~~l-~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+ .+++..| .++||.+.|+.. |+++. ..+++++++++++|.++++++
T Consensus 398 --~-~~~~~~ll~~~gV~v~~G~g---Ris~a-~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 398 --T-PEHVDYLKEKWSIYLVKAGG---RMSMC-GLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp --C-HHHHHHHHHHHCEEECSGGG---EEEGG-GCCTTTHHHHHHHHHHHHHHS
T ss_pred --C-HHHHHHHHHhCCEEEeCCCc---EEEEe-cCCHHHHHHHHHHHHHHHHhc
Confidence 2 2455555 577999999642 99864 337777999999999998854
No 148
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.85 E-value=8.7e-22 Score=167.70 Aligned_cols=194 Identities=12% Similarity=0.071 Sum_probs=141.7
Q ss_pred CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccc-cccCCCCcCeeeeccccc-CCchh
Q psy6547 40 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-IHYEDVRPDIVILGKALS-GGLYP 117 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~-~~~~~~~~d~~~~sK~~~-~g~~~ 117 (266)
++++|+++.++|++|.+ ++.+.+++|++.| | ++|+||+|+++.. +.... .+..+....+.++||+++ +| +|
T Consensus 138 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~---~-~li~De~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r 210 (335)
T 1uu1_A 138 EGDVVFIPNPNNPTGHV-FEREEIERILKTG---A-FVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAA-QR 210 (335)
T ss_dssp TTEEEEEESSCTTTCCC-CCHHHHHHHHHTT---C-EEEEECTTHHHHC-CCCGGGGGTCSSEEEEEESTTTTTCGG-GC
T ss_pred CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhC---C-EEEEECcchhhcc-hhHHHHhhhCCCEEEEecchhhcCCcc-cC
Confidence 56788855557888877 6777666666665 8 8999999987632 22112 233344556677999998 88 99
Q ss_pred hhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCcc
Q psy6547 118 ISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLK 196 (266)
Q Consensus 118 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 196 (266)
+||+++++++.+.+... ..+++.+++++.++.++|+..+ .++..++++++++++.+.|++ .+. .. .++.|.
T Consensus 211 ~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~---~~-~~~~~~- 282 (335)
T 1uu1_A 211 VGYVVASEKFIDAYNRV--RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE-MGY---RI-TDSRGN- 282 (335)
T ss_dssp CEEEEECHHHHHHHHHH--SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH-HTC---CB-CCCCSS-
T ss_pred eEEEEeCHHHHHHHHHh--cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-CCc---EE-cCCCCe-
Confidence 99999999888776542 2346889999999988887632 245677888888889888887 432 22 233466
Q ss_pred ceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 197 KSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
++++.++. .+..+++++|.++||.+.+. .+++|+++. +++++++++++|+++
T Consensus 283 --~~~~~~~~---~~~~~~~~~l~~~gi~v~~~-~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 283 --FVFVFMEK---EEKERLLEHLRTKNVAVRSF-REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp --EEEEECCT---HHHHHHHHHHHHHTEEEEEE-TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred --EEEEECCC---CCHHHHHHHHHHCCEEEEEC-CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 88888754 35778999999999999984 789999953 578899999998753
No 149
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=2.1e-20 Score=161.50 Aligned_cols=227 Identities=17% Similarity=0.143 Sum_probs=160.8
Q ss_pred CCCCceeecC------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCcC
Q psy6547 16 HMPGYNIIPY------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADEVQTGLG 87 (266)
Q Consensus 16 ~~~~v~~~~~------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~--g~~li~De~~~~~~ 87 (266)
.+.+++.++. .|+++|+++++++ ++++|++++++|++|.+. ++++|.++|++| |+++|+||+|+ ++
T Consensus 108 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~----~l~~i~~~~~~~~~~~~li~D~a~~-~~ 181 (385)
T 2bkw_A 108 YGAQVDVVRPLKIGESVPLELITEKLSQN-SYGAVTVTHVDTSTAVLS----DLKAISQAIKQTSPETFFVVDAVCS-IG 181 (385)
T ss_dssp TTCEEEEECCSSTTSCCCHHHHHHHHHHS-CCSEEEEESEETTTTEEC----CHHHHHHHHHHHCTTSEEEEECTTT-TT
T ss_pred cCCceEEEecCCCCCCCCHHHHHHHHhcC-CCCEEEEEccCCCcCeEc----CHHHHHHHHHhhCCCCEEEEECccc-cC
Confidence 4567777776 4899999999642 578999999999999886 689999999999 99999999995 32
Q ss_pred CcCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhh-ccCC----------------------CCC---CCCCC
Q psy6547 88 RTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMG-TLVP----------------------GTH---GSTYG 141 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~-~~~~----------------------~~~---~~~~~ 141 (266)
. ..+....++.+..+.+++|+++++ ..+|++++++++++ .+.. ... ....+
T Consensus 182 ~--~~~~~~~~~~d~~~~s~~K~~~~~-~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (385)
T 2bkw_A 182 C--EEFEFDEWGVDFALTASQKAIGAP-AGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFAT 258 (385)
T ss_dssp T--SCCCTTTTTCSEEEEESSSTTCCC-SCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSC
T ss_pred C--ccccccccCceEEEecCccccccC-CcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCC
Confidence 2 122233333333333478998854 45699999888766 4420 000 11235
Q ss_pred CcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHh-hcccccCCCcccE-E-ecCccceeeEEEEeeCccchHHHH
Q psy6547 142 GNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSEL-SSPANKSKASFKL-S-SGGLKKSINTLILSVSAILEVYDV 215 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~ 215 (266)
.+...+.++.++++.+.. +++.++++++++++.+.| ++ ++........ . ..+. ++++.+++ ..++
T Consensus 259 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~ 329 (385)
T 2bkw_A 259 PPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG-LQLTSVSRYPSNMSAHG---LTAVYVAD-----PPDV 329 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-TCCEESSCSSSTTBCSS---CEEEECSC-----HHHH
T ss_pred CCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh-cCceecccCcccccCCc---eEEEecCC-----HHHH
Confidence 677777788888887654 346788889999999999 77 4322121100 0 2355 88888753 6789
Q ss_pred HHHHHHCCceeccCC-----CCEEEEe-cc---CCCCHHHHHHHHHHHHHHHHH
Q psy6547 216 CIKMKDAGLVTKPIS-----NNIIRLS-PA---LNITEQELREGLDIIINTINT 260 (266)
Q Consensus 216 ~~~l~~~gi~~~~~~-----~~~iR~~-~~---~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+++|.++||.++++. .+++|++ ++ +.++++++++++++|++++++
T Consensus 330 ~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 330 IAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp HHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 999999999998753 4789999 54 357999999999999988754
No 150
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.85 E-value=2.6e-20 Score=168.48 Aligned_cols=234 Identities=14% Similarity=0.069 Sum_probs=149.9
Q ss_pred CCCCceeecC-------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHH--HhcCCEEEEeccccCc
Q psy6547 16 HMPGYNIIPY-------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALC--SQYNVLFIADEVQTGL 86 (266)
Q Consensus 16 ~~~~v~~~~~-------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~--~~~g~~li~De~~~~~ 86 (266)
.+.+++.++. .|+++|++.+ .+++++|++++++|++|.+ ++.+.+++|.++| +++|++||+||+|.+|
T Consensus 216 ~g~~~~~v~~~~~~~~~~d~~~l~~~~--~~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~ 292 (546)
T 2zy4_A 216 YALEEVAINADPSLNWQYPDSELDKLK--DPAIKIFFCVNPSNPPSVK-MDQRSLERVRNIVAEHRPDLMILTDDVYGTF 292 (546)
T ss_dssp SCCEEEEEECBGGGTTBCCHHHHGGGG--STTEEEEEEESSCSSSCBC-CCHHHHHHHHHHHHHTCTTCEEEEECTTGGG
T ss_pred CCcEEEEEecCcccCCCCCHHHHHHhh--CCCCeEEEEECCCCCCCcc-CCHHHHHHHHHHHHhccCCcEEEEeCcchhh
Confidence 3566777764 4788998877 4578999888888888877 8999999999999 8899999999999877
Q ss_pred CCcCcccccccCCCCcCeeeeccccc-CCchhhhhheecHH-hhhccCC-------------------------------
Q psy6547 87 GRTGKLLAIHYEDVRPDIVILGKALS-GGLYPISAVLADDE-VMGTLVP------------------------------- 133 (266)
Q Consensus 87 ~~~g~~~~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~-~~~~~~~------------------------------- 133 (266)
......+.....+....+.+|||.++ +| +|+||++++++ +++.+..
T Consensus 293 ~~~~~s~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~ 371 (546)
T 2zy4_A 293 ADDFQSLFAICPENTLLVYSFSKYFGATG-WRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLV 371 (546)
T ss_dssp STTCCCHHHHCGGGEEEEEESTTTTTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHH
T ss_pred cccCcCHHHhCCCCEEEEEeCccccCCCC-cceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhh
Confidence 53222111111133455667999998 88 99999998775 5544410
Q ss_pred -----CCCCCCCCCcHHHHHHHH-HHH-HHHhh-cc----HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeE
Q psy6547 134 -----GTHGSTYGGNPLACKLAM-TAL-DVILE-EN----MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINT 201 (266)
Q Consensus 134 -----~~~~~~~~~~~~~~~a~~-~~l-~~~~~-~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 201 (266)
.....+.+.+.+.+.++. .++ ..++. +. +++.++++.+.+.+.| +. .+.......|. ++|
T Consensus 372 ~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L----~~-~~~~~~~~~~~---~l~ 443 (546)
T 2zy4_A 372 ADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYREL----GM-PPLRDENAVDY---YTL 443 (546)
T ss_dssp HHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGG----TS-SCCCCTTBCCS---EEE
T ss_pred hhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc----CC-CcccCCCCeeE---EEE
Confidence 011223355666655431 111 22222 22 3333444444444333 21 12211234566 778
Q ss_pred EEEeeC-----c---------cc-hHHHHHHHHHHCCceeccC-----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 202 LILSVS-----A---------IL-EVYDVCIKMKDAGLVTKPI-----SNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 202 ~~~~~~-----~---------~~-~~~~~~~~l~~~gi~~~~~-----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+.++.- . +. +...+.+.|.++||.+.|+ +.+++|+++. ..+++++++++++|++++++.
T Consensus 444 ~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 444 IDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp EEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred EEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHH
Confidence 887520 0 01 2344666777999999986 2478999965 348999999999999998776
Q ss_pred h
Q psy6547 262 A 262 (266)
Q Consensus 262 ~ 262 (266)
.
T Consensus 523 ~ 523 (546)
T 2zy4_A 523 Y 523 (546)
T ss_dssp H
T ss_pred H
Confidence 4
No 151
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.85 E-value=1.3e-20 Score=161.00 Aligned_cols=233 Identities=12% Similarity=0.148 Sum_probs=157.1
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG- 85 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~- 85 (266)
.+.+++.+ .+ |+++|+++++++ +++++|++++++|++|+..++.+++++|.++|++||+++|+||+|..
T Consensus 100 ~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~ 178 (347)
T 1jg8_A 100 SGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFN 178 (347)
T ss_dssp TCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHH
T ss_pred cCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhc
Confidence 34566666 32 899999999542 26899999999999833448999999999999999999999998731
Q ss_pred -cCCcCcccccccCCCCcCeeeecccccCCchhhh-hheecHHhhhccCCC--CCCCCCCCcHHHHHHHHHHHHHHhhcc
Q psy6547 86 -LGRTGKLLAIHYEDVRPDIVILGKALSGGLYPIS-AVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILEEN 161 (266)
Q Consensus 86 -~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~ 161 (266)
+...+........+.+.-+.++||+++++ +| ++++++++++.+... ....++..+.+.++++..+++... +.
T Consensus 179 ~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 254 (347)
T 1jg8_A 179 ASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DR 254 (347)
T ss_dssp HHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TT
T ss_pred chhhcCCChHHhcccccEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HH
Confidence 11112111100012232345599999854 56 566787776654321 122333445566666666665421 22
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCC
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALN 241 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~ 241 (266)
.++..++++.+.+.|++ ++.. +.. ....+. ++++.++.. +.+..+++++|.++||.+++.+.+++|++++..
T Consensus 255 -~~~~~~~~~~l~~~L~~-~~~~-~~~-~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~ 326 (347)
T 1jg8_A 255 -LKEDHENARFLALKLKE-IGYS-VNP-EDVKTN---MVILRTDNL-KVNAHGFIEALRNSGVLANAVSDTEIRLVTHKD 326 (347)
T ss_dssp -HHHHHHHHHHHHHHHHH-HTCB-CCG-GGCCSS---EEEEECTTS-SSCHHHHHHHHHHHTEECEEEETTEEEEECCTT
T ss_pred -HHHHHHHHHHHHHHHHh-cCce-ecc-CCCcce---EEEEEcccc-cCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCC
Confidence 34444567888888887 4322 111 123466 888887631 246788999999999999987778999999888
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~~ 261 (266)
++++++++++++|+++++++
T Consensus 327 ~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 327 VSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999988653
No 152
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=1.7e-20 Score=162.79 Aligned_cols=224 Identities=15% Similarity=0.077 Sum_probs=157.6
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
...+.+++.++.+|+++|++.++ +++++|++++++|++|.+. ++++|+++|++||+++|+||+|+++... ..
T Consensus 113 ~~~g~~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~De~~~~~~~~-~~- 184 (386)
T 1cs1_A 113 KRGCYRVLFVDQGDEQALRAALA--EKPKLVLVESPSNPLLRVV----DIAKICHLAREVGAVSVVDNTFLSPALQ-NP- 184 (386)
T ss_dssp TTTSCEEEEECTTCHHHHHHHHH--TCCSEEEEECSCTTTCCCC----CHHHHHHHHHHTTCEEEEECTTTCTTTC-CG-
T ss_pred HhcCCEEEEeCCCCHHHHHHhhc--cCCcEEEEeCCCCCCCccc----CHHHHHHHHHHcCCEEEEECCCcccccC-Cc-
Confidence 55678899999999999999995 4689999999999999886 7999999999999999999999765322 21
Q ss_pred ccccCCCCcCeeeecccccCCchhh-hhheecH-HhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALSGGLYPI-SAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~~g~~~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
. .++.+..+.++||+++++..++ |++++++ ++.+.+.......+.+.+++.+.++..+++.+ +...++..++.+
T Consensus 185 -~-~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~ 260 (386)
T 1cs1_A 185 -L-ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTL--VPRMELAQRNAQ 260 (386)
T ss_dssp -G-GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTH--HHHHHHHHHHHH
T ss_pred -c-ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHH--HHHHHHHHHHHH
Confidence 1 2344555557999998432565 8998875 67776654333334557788777776666543 223455566666
Q ss_pred HHHHHhhccccc------CCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc---C----
Q psy6547 172 IFRSELSSPANK------SKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP---I---- 229 (266)
Q Consensus 172 ~l~~~l~~~~~~------~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~---- 229 (266)
.+.+.+++ +.. +.+.. ..++.|. ++.|.+.. ..+++.+.|.++||.++. +
T Consensus 261 ~l~~~l~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~l~~~gi~~~~~~~g~~~s 332 (386)
T 1cs1_A 261 AIVKYLQT-QPLVKKLYHPSLPENQGHEIAARQQKGFGA---MLSFELDG----DEQTLRRFLGGLSLFTLAESLGGVES 332 (386)
T ss_dssp HHHHHHTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEESS----CHHHHHHHHHTCSSSEEBSCCCSSSC
T ss_pred HHHHHHhc-CCCeEEEECCCCCCCccHHHHHHhcCCCce---EEEEEECC----CHHHHHHHHHhCCcceEcccCCCcce
Confidence 77777665 321 11111 0123466 88888765 256788888899998873 1
Q ss_pred -----------------------CCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 230 -----------------------SNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 230 -----------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
..+++|++++...++++++.+.+.|+++
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 333 LISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1479999999877777777777766654
No 153
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.85 E-value=1.8e-21 Score=170.12 Aligned_cols=230 Identities=13% Similarity=0.073 Sum_probs=156.3
Q ss_pred cccCCCCCCceeecCC-------CHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy6547 11 NEFGPHMPGYNIIPYN-------DVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEV 82 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~-------d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~ 82 (266)
..+...+.+++.++.+ |+++|++.+++.+ ..++++++.++|++|.+ ++.+.+++|+++|++||+++|+||+
T Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~ 224 (409)
T 4eu1_A 146 SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD-PTHDDWRQVCDVIKRRNHIPFVDMA 224 (409)
T ss_dssp HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEecc
Confidence 3445567788888752 7999999996533 56677767778888876 8999999999999999999999999
Q ss_pred ccCcCCcCc---cccccc-CCCCcC---eeeeccccc-CCchhhhhh---eecHH----hhhccCCCCCCCCCCCcHHHH
Q psy6547 83 QTGLGRTGK---LLAIHY-EDVRPD---IVILGKALS-GGLYPISAV---LADDE----VMGTLVPGTHGSTYGGNPLAC 147 (266)
Q Consensus 83 ~~~~~~~g~---~~~~~~-~~~~~d---~~~~sK~~~-~g~~~~g~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~ 147 (266)
|.++...+. ...... .+..++ +.++||.++ +| +|+||+ +++++ +.+.+.......+++.+++++
T Consensus 225 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 303 (409)
T 4eu1_A 225 YQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG-HRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGA 303 (409)
T ss_dssp CTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCcc-CCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHH
Confidence 988755441 111111 122233 346999998 88 999995 55666 555544322344556678888
Q ss_pred HHHHHHHHHH------h--hccHHHHHHHHHHHHHHHhhcccccCC-CcccEEecCccceeeEEEEeeCccchHHHHHHH
Q psy6547 148 KLAMTALDVI------L--EENMIENAYKMGEIFRSELSSPANKSK-ASFKLSSGGLKKSINTLILSVSAILEVYDVCIK 218 (266)
Q Consensus 148 ~a~~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (266)
.++..+|+.. . .++++++++++++++.+.|++ ++.+. +....+..|. +.|..+ + .+++.+
T Consensus 304 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~---~~~~~~------~-~~~~~~ 372 (409)
T 4eu1_A 304 WVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA-CGSVHDWSHIERQVGM---MAYTGL------T-REQVEL 372 (409)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCSCCHHHHHSCSS---EEECCC------C-HHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcceecCCceE---EEEeCC------C-HHHHHH
Confidence 8888777632 1 245677888888889888887 54211 3221223344 444322 2 244566
Q ss_pred HH-HCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 219 MK-DAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 219 l~-~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
|+ ++||.+.|+. |++.+. .+++++++++++|++++
T Consensus 373 ll~~~gv~v~p~~----Ri~~~~-~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 373 LRSEYHIYMTLNG----RAAVSG-LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp HHHHHCEECCTTC----EEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred HHHcCCEEEcCCC----EEEEEe-cCHhhHHHHHHHHHHHh
Confidence 65 6799999863 777654 56777999999998875
No 154
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.84 E-value=1.8e-20 Score=163.27 Aligned_cols=226 Identities=13% Similarity=0.086 Sum_probs=157.2
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
...+.+++.++.+|++++++.+ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|..+ ..+...
T Consensus 125 ~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~De~~~~~-~~~~~~ 197 (398)
T 2rfv_A 125 PKFGINVRFVDAAKPEEIRAAM--RPETKVVYIETPANPTLSLV----DIETVAGIAHQQGALLVVDNTFMSP-YCQQPL 197 (398)
T ss_dssp HHTTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSBTTTTBCC----CHHHHHHHHHHTTCEEEEECTTTCT-TTCCGG
T ss_pred HHcCCEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccc----CHHHHHHHHHHcCCEEEEECCCccc-ccCCch
Confidence 4457789999999999999999 45789999999999999886 6999999999999999999999643 222221
Q ss_pred ccccCCCCcCeeeeccccc-CCchhh-hhheecHHhhh-ccCCCCCCC-CCCCcHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALS-GGLYPI-SAVLADDEVMG-TLVPGTHGS-TYGGNPLACKLAMTALDVILEENMIENAYKM 169 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~-~g~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 169 (266)
.++.+..+.++||+++ +| +|+ |++++++++++ .+....... ..+.+++.+.++.++++.+ +...++..++
T Consensus 198 ---~~~~di~~~s~sK~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 271 (398)
T 2rfv_A 198 ---QLGADIVVHSVTKYINGHG-DVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL--GIRMERHCEN 271 (398)
T ss_dssp ---GGTCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH--HHHHHHHHHH
T ss_pred ---hhCCcEEEEeCcccccCCC-CceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH--HHHHHHHHHH
Confidence 2345555577999997 56 788 99999988776 455433333 4567888888888888643 2234445556
Q ss_pred HHHHHHHhhcccc------cCCCcc------c---EEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-----
Q psy6547 170 GEIFRSELSSPAN------KSKASF------K---LSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----- 229 (266)
Q Consensus 170 ~~~l~~~l~~~~~------~~~~~~------~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----- 229 (266)
.+.+.+.|++ .+ .+.+.. . .++.|. +++|.++.. ..+...+.+++...|+.+.++
T Consensus 272 ~~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~---~~~~~~~~~-~~~~~~l~~~~~~~~i~~~~G~~~~l 346 (398)
T 2rfv_A 272 ALKIARFLEG-HPSITRVYYPGLSSHPQYELGQRQMSLPGG---IISFEIAGG-LEAGRRMINSVELCLLAVSLGDTETL 346 (398)
T ss_dssp HHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEETTH-HHHHHHHHTTCSSSEECSCCSSSSCE
T ss_pred HHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCce---EEEEEEcCC-HHHHHHHHHhCCcceeccCCCCccee
Confidence 6666666665 21 111110 0 013466 899988641 123444555555556665543
Q ss_pred --------------------C--CCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 230 --------------------S--NNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 230 --------------------~--~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
+ .+.+|++++..+++++++++.+.|+++
T Consensus 347 i~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 347 IQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp EECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 579999999999999998888888653
No 155
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.84 E-value=4.3e-20 Score=156.82 Aligned_cols=222 Identities=13% Similarity=0.053 Sum_probs=154.0
Q ss_pred CCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHh-cCCEEEEeccccCcCCcCcccc
Q psy6547 16 HMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-YNVLFIADEVQTGLGRTGKLLA 94 (266)
Q Consensus 16 ~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~-~g~~li~De~~~~~~~~g~~~~ 94 (266)
.+.+++.++..|++++++.+ .+++++|++++++|++|.+. ++++|.++|++ +|+++|+||+|+.. .....
T Consensus 61 ~g~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~~~~i~~~~~~~~~~~li~D~a~~~~-~~~~~-- 131 (331)
T 1pff_A 61 FGVEVDFIDMAVPGNIEKHL--KPNTRIVYFETPANPTLKVI----DIEDAVKQARKQKDILVIVDNTFASP-ILTNP-- 131 (331)
T ss_dssp TTCEEEEECTTSTTHHHHTC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHTTSSSCEEEEECTTTHH-HHCCG--
T ss_pred cCCEEEEeCCCCHHHHHHhh--cCCCeEEEEECCCCCcCccc----CHHHHHHHHhhhcCCEEEEECCCccc-ccCCh--
Confidence 56788889989999999999 45789999999999999986 69999999999 99999999999532 11111
Q ss_pred cccCCCCcCeeeeccccc-CCchh-hhhheecH-HhhhccCCCCCC-CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q psy6547 95 IHYEDVRPDIVILGKALS-GGLYP-ISAVLADD-EVMGTLVPGTHG-STYGGNPLACKLAMTALDVILE--ENMIENAYK 168 (266)
Q Consensus 95 ~~~~~~~~d~~~~sK~~~-~g~~~-~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~ 168 (266)
. .++.+..+.++||+++ +| .| +|++++++ ++.+.+...... .+.+.+++.+.++..+++.+.. +...++...
T Consensus 132 ~-~~~~d~~~~s~~K~~~~~~-~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 209 (331)
T 1pff_A 132 L-DLGVDIVVHSATKYINGHT-DVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQK 209 (331)
T ss_dssp G-GGTCSEEEEETTTTTSSSS-SCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-hcCCcEEEEECccccCCCC-CceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHH
Confidence 2 2455555666999998 46 77 78999998 888877765555 5567788887777667764422 223333333
Q ss_pred HHHHHHHH--hhcccccCCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC--------
Q psy6547 169 MGEIFRSE--LSSPANKSKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI-------- 229 (266)
Q Consensus 169 ~~~~l~~~--l~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------- 229 (266)
..+++.++ +.+.+ ...+.. ..++.+. ++.|.+.+ .+++.+.|.++||.+++.
T Consensus 210 ~~~~l~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~l~~~gI~~~~~s~g~~~sl 280 (331)
T 1pff_A 210 VAEFLHEHKAVKKVY-YPGLPDHPGHEIAKKQMKMFGS---MIAFDVDG-----LEKAKKVLDNCHVVSLAVSLGGPESL 280 (331)
T ss_dssp HHHHHHHCTTCCCEE-CTTSTTSTTHHHHHHHCSSCCS---EEEEECSS-----HHHHHHHHHTCSSSEECSSCCSSSCE
T ss_pred HHHHHHcCCCeeEEE-CCCCCCCccHHHHHhhCCCCce---EEEEEECC-----HHHHHHHHHhCCCceeccCCCCccee
Confidence 33333322 11100 011111 0122455 88888753 567888888999976432
Q ss_pred ----------------------CCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 230 ----------------------SNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 230 ----------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
..+++|++++..+++++++++++.|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 281 IQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp EECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred eecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1479999999999999999999988753
No 156
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.84 E-value=6.9e-20 Score=160.06 Aligned_cols=226 Identities=13% Similarity=0.061 Sum_probs=157.5
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHh-cCCEEEEeccccCcCCcCc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-YNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~-~g~~li~De~~~~~~~~g~ 91 (266)
+...+.+++.++.+|+++|++.+ .+++++|++++++|++|.+. ++++|.++|++ +|+++|+||+|+.+.. ..
T Consensus 122 ~~~~g~~~~~v~~~d~~~l~~~i--~~~t~~v~l~~p~NptG~v~----~l~~i~~la~~~~~~~li~De~~~~~~~-~~ 194 (404)
T 1e5e_A 122 LTKFGIQVDFINTAIPGEVKKHM--KPNTKIVYFETPANPTLKII----DMERVCKDAHSQEGVLVIADNTFCSPMI-TN 194 (404)
T ss_dssp HHHTTCEEEEECTTSTTHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHTSTTCEEEEECTTTCTTT-CC
T ss_pred HHHcCCEEEEECCCCHHHHHHhc--CCCCcEEEEECCCCCCCccc----CHHHHHHHHHhhcCCEEEEECCCchhhh-CC
Confidence 44567889999999999999999 45799999999999999886 69999999999 9999999999976532 12
Q ss_pred ccccccCCCCcCeeeeccccc-CCchhh-hhheecHHhhh-ccCCCCCCC-CCCCcHHHHHHHHHHHHHHhhccHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALS-GGLYPI-SAVLADDEVMG-TLVPGTHGS-TYGGNPLACKLAMTALDVILEENMIENAY 167 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~-~g~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 167 (266)
++ .++.+..+.++||+++ +| +|+ |++++++++++ .+....... ....+++.+.++..+++.+ +...++..
T Consensus 195 ~~---~~~~di~~~S~sK~~~~~g-~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~--~~~~~~~~ 268 (404)
T 1e5e_A 195 PV---DFGVDVVVHSATKYINGHT-DVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTL--NIRMKAES 268 (404)
T ss_dssp GG---GGTCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTH--HHHHHHHH
T ss_pred cc---ccCCEEEEEcCccccCCCC-CCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHH--HHHHHHHH
Confidence 22 2355555566999999 57 897 99999998877 666544433 4567888888887777543 22334444
Q ss_pred HHHHHHHHHhhcccc------cCCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc---C
Q psy6547 168 KMGEIFRSELSSPAN------KSKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP---I 229 (266)
Q Consensus 168 ~~~~~l~~~l~~~~~------~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~ 229 (266)
++.+.+.+.+++ .. .+.+.. ..++.|. |+.|.++. ..++..+.|.+.||++.. +
T Consensus 269 ~~~~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~---~~~~~~~~----~~~~~~~~l~~~~i~~~~~s~G 340 (404)
T 1e5e_A 269 ENAMKVAEYLKS-HPAVEKVYYPGFEDHEGHDIAKKQMRMYGS---MITFILKS----GFEGAKKLLDNLKLITLAVSLG 340 (404)
T ss_dssp HHHHHHHHHHHT-CTTEEEEECTTCSSSTTHHHHHHHCSSCCS---EEEEEETT----HHHHHHHHHHTCSSSEESSCCC
T ss_pred HHHHHHHHHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCce---EEEEEeCC----CHHHHHHHHHhCCCceeccCCC
Confidence 555555555554 21 111111 0112366 88887754 234455566677885432 1
Q ss_pred -------------------------C--CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 230 -------------------------S--NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 230 -------------------------~--~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+ .+++|++++. |++++++++|+++++....
T Consensus 341 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 341 GCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALLR 397 (404)
T ss_dssp SSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHHC
T ss_pred CcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHHH
Confidence 1 4799999665 7899999999999887653
No 157
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.84 E-value=5.8e-20 Score=163.72 Aligned_cols=226 Identities=15% Similarity=0.129 Sum_probs=160.8
Q ss_pred CCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 14 GPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 14 ~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
...+.+++.++.+ |+++|++++ .+++++|+++++ |++|.+ .+++++|+++|++||+++|+||+|... .
T Consensus 174 ~~~G~~vv~v~~~~~~~~d~~~L~~~i--~~~t~~v~~~~p-n~~G~~---~~~l~~i~~l~~~~g~~li~Dea~~~~-~ 246 (474)
T 1wyu_B 174 SMAGYQVREIPSGPEGEVDLEALKREL--GPHVAALMLTNP-NTLGLF---ERRILEISRLCKEAGVQLYYDGANLNA-I 246 (474)
T ss_dssp HHTTCEEEEECBCTTSSBCHHHHHHHC--STTEEEEEECSS-CTTSCC---CTTHHHHHHHHHHHTCEEEEEGGGGGG-T
T ss_pred HHCCCEEEEecCCCCCCcCHHHHHHhh--CCCceEEEEECC-CCCccc---CCCHHHHHHHHHHcCCEEEEeCchhhh-h
Confidence 3346688888875 899999999 456899998875 467765 248999999999999999999999543 2
Q ss_pred cCcccccccCCCCcCeee--ecccccC-----CchhhhhheecHHhhhccCCC-------------------CCCCCCCC
Q psy6547 89 TGKLLAIHYEDVRPDIVI--LGKALSG-----GLYPISAVLADDEVMGTLVPG-------------------THGSTYGG 142 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~--~sK~~~~-----g~~~~g~~~~~~~~~~~~~~~-------------------~~~~~~~~ 142 (266)
.|.. ....+ .+|+++ ++|+|++ | .++|++++++++++.+... ....+++.
T Consensus 247 ~g~~-~~~~~--g~di~~~s~~K~~~~p~g~gG-~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (474)
T 1wyu_B 247 MGWA-RPGDM--GFDVVHLNLHKTFTVPHGGGG-PGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYG 322 (474)
T ss_dssp TTTC-CHHHH--TCSEEECCTTTTTCCCCTTSC-CCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTS
T ss_pred ccCC-CcccC--CCcEEEEeCccccccCCCCCC-CCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcC
Confidence 2221 12222 366766 4899873 3 4899999999888776520 01133456
Q ss_pred cHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHhhcccccCCCcccEEecCcccee--eEEEEeeCccchHHHHHH
Q psy6547 143 NPLACKLAMTALDVILEENM---IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSI--NTLILSVSAILEVYDVCI 217 (266)
Q Consensus 143 ~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~ 217 (266)
+++++.++...++.+..+.+ .+++.++++++.+.|++ ++..... +.+. + +++.++. +.+..++++
T Consensus 323 ~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~-~g~~~~~----~~~~---~~~~~~~~~~--~~~~~~l~~ 392 (474)
T 1wyu_B 323 NFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYRVPY----DGPS---MHEFVAQPPE--GFRALDLAK 392 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCBCSS----CSSC---CSCEEEBCST--TCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcEecC----CCCc---ceEEEEEcCC--CCCHHHHHH
Confidence 77888888888876554444 77788899999999988 4322111 1122 2 4554432 456889999
Q ss_pred HHHHCCceeccC-----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 218 KMKDAGLVTKPI-----SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 218 ~l~~~gi~~~~~-----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+|.++||.+... ..+++|++++..+|++++++++++|++++++
T Consensus 393 ~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 393 GLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 999999985311 2578999998888999999999999988754
No 158
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.83 E-value=5.7e-20 Score=157.61 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=150.2
Q ss_pred CCCceeecCC----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC--CcC
Q psy6547 17 MPGYNIIPYN----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG--RTG 90 (266)
Q Consensus 17 ~~~v~~~~~~----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~--~~g 90 (266)
+.+++.++.+ |+++|+++ .+++++|++++++|++|...++.+.+++|+++|++||++||+|++|..+. ..+
T Consensus 113 g~~~~~v~~~~~~~d~~~l~~~---~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~ 189 (359)
T 3pj0_A 113 QITPLLLGTANQLLTIDDIKSL---REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQ 189 (359)
T ss_dssp CCEEEECSCTTSCCCHHHHHTC---SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHT
T ss_pred CceEEecCCcCCCcCHHHHHhc---cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhC
Confidence 4566666643 78888877 34689999988877775556999999999999999999999999984321 111
Q ss_pred ccc-ccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC---CCCCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q psy6547 91 KLL-AIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENA 166 (266)
Q Consensus 91 ~~~-~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 166 (266)
... .+. .+.+.-+.++||+++++ .. |++++++++++.+... .....+..+. .++++..+++.. .+..+++
T Consensus 190 ~~~~~~~-~~~d~~~~s~sK~~~~~-~g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~a~~~~l~~~--~~~~~~~ 263 (359)
T 3pj0_A 190 KSAEEIC-ALFDSVYVSFYKGIGGI-AG-AILAGNDDFVQEAKIWKRRYGGDLISLYP-YILSADYYFEKR--IGKMAEY 263 (359)
T ss_dssp CCHHHHH-TTCSEEEEESSSTTCCS-SC-EEEEECHHHHHHHHHHHHHTTCCCSCCHH-HHHHHHHHHHHH--GGGHHHH
T ss_pred CCHHHhh-ccCCEEEEeccccCCCc-ce-EEEECCHHHHHHHHHHHHHhCCCcchhHH-HHHHHHHHHHHH--HHHhHHH
Confidence 111 111 22233334699999866 33 7788899888776531 1222333333 334444556543 2345567
Q ss_pred HHHHHHHHHHhhcccccCCCccc-EEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC------CCEEEEecc
Q psy6547 167 YKMGEIFRSELSSPANKSKASFK-LSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS------NNIIRLSPA 239 (266)
Q Consensus 167 ~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~~~iR~~~~ 239 (266)
.++++++.+.|++ +.. +... .+..+. ++++.++.....+..++.+.|.++||.++++. .+++|++..
T Consensus 264 ~~~~~~l~~~L~~-~~g--~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~ 337 (359)
T 3pj0_A 264 FEAAKGLAERFNS-CSG--VKTVPEVPVSN---MFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVG 337 (359)
T ss_dssp HHHHHHHHHHHHT-STT--EEEESSSCSSS---EEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECC
T ss_pred HHHHHHHHHHHhh-CCC--ceeeccCCcce---EEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEec
Confidence 7888888899887 421 2110 123455 78888765223457889999999999999862 357899754
Q ss_pred ---CCCCHHHHHHHHHHHHHH
Q psy6547 240 ---LNITEQELREGLDIIINT 257 (266)
Q Consensus 240 ---~~~t~~~i~~~~~~l~~~ 257 (266)
...+.+++++++++|.+.
T Consensus 338 ~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 338 DAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp TTGGGSCHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHhc
Confidence 346899999999999875
No 159
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.83 E-value=2.9e-20 Score=159.27 Aligned_cols=218 Identities=8% Similarity=-0.004 Sum_probs=156.4
Q ss_pred CCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc-CCEEEEeccccCcCCcC
Q psy6547 17 MPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY-NVLFIADEVQTGLGRTG 90 (266)
Q Consensus 17 ~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~-g~~li~De~~~~~~~~g 90 (266)
+.+++.++.+ |+++|+ + .+++++|++++++|++|.+. ++++|.++|++| |+++|+|++|+...
T Consensus 106 g~~~~~v~~~~~~~~d~~~l~--~--~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~p~~~li~D~a~~~~~--- 174 (362)
T 3ffr_A 106 GREAYKEEAAFGKGFYPADIT--V--PADAEIICLTHNETSSGVSM----PVEDINTFRDKNKDALIFVDAVSSLPY--- 174 (362)
T ss_dssp TCEEEEEECCTTCCCCGGGCC--C--CTTCCEEEEESEETTTTEEC----CHHHHTTSGGGSTTSEEEEECTTTTTS---
T ss_pred CCCeEEEecCCCCCCCHHHHh--c--cCCccEEEEEcCCCCcceeC----CHHHHHHHHHhCCCCEEEEecccccCC---
Confidence 5566666643 678887 4 55789999999999999886 699999999999 99999999995321
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhheecHHhhhccCCCC---------------------CCCCCCCcHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGT---------------------HGSTYGGNPLAC 147 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~ 147 (266)
...... . .|+++ ++|+++++ ..+|++++++++.+.+.... .....+.+...+
T Consensus 175 ~~~~~~--~--~d~~~~s~~K~~~~~-~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (362)
T 3ffr_A 175 PKFDWT--K--IDSVFFSVQKCFGLP-AGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNI 249 (362)
T ss_dssp SCCCTT--S--CSEEEEETTSTTCCC-SCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHH
T ss_pred cccChh--H--CcEEEEecccccCCC-CceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHH
Confidence 111111 1 44444 77999944 44678888888766554211 111455677777
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccc-ccCCCc-ccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 148 KLAMTALDVILE---ENMIENAYKMGEIFRSELSSPA-NKSKAS-FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 148 ~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~-~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
.++..+++.+.. ++..++++++++++.+.|++ + +..... ......+. ++++.++. +..++++.|.++
T Consensus 250 ~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~l~~~ 321 (362)
T 3ffr_A 250 FLLGKVTGDMLQISADGIRKQTEEKAALINTYIES-SKVFSFGVEDAKLRSMT---TIVANTTM----LPGEINKILEPF 321 (362)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-CSSEEESSSCGGGBCSS---EEEEEESS----CHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH-ccCceeccCChhhcCCc---eEEEecCC----CHHHHHHHHHHC
Confidence 777788876654 45777888889999999887 5 222221 10112344 78887765 678999999999
Q ss_pred CceeccC----CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 223 GLVTKPI----SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 223 gi~~~~~----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
||.+.++ ..+++|++++..++++++++++++|++++
T Consensus 322 gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 322 DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 9999864 46899999999999999999999998764
No 160
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.82 E-value=2.1e-20 Score=162.79 Aligned_cols=235 Identities=14% Similarity=0.024 Sum_probs=153.2
Q ss_pred cCcccccCCCCCCceeecCC-------CHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 7 PTSYNEFGPHMPGYNIIPYN-------DVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 7 ~~~~~~~~~~~~~v~~~~~~-------d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
+.....+...+.+++.++.+ |++++++.+++ .++++++++++++|++|.+ ++.+.+++|+++|++||+++|
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li 212 (401)
T 7aat_A 134 GNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAY 212 (401)
T ss_dssp TTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEE
T ss_pred hhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEE
Confidence 33333445567788888753 67888888865 2468899999999999987 899999999999999999999
Q ss_pred EeccccCcCCcCc---cccc----ccCCCCcCeeeeccccc-CCchhhhhhee---cHH----hhhccCCCCCCCCCCCc
Q psy6547 79 ADEVQTGLGRTGK---LLAI----HYEDVRPDIVILGKALS-GGLYPISAVLA---DDE----VMGTLVPGTHGSTYGGN 143 (266)
Q Consensus 79 ~De~~~~~~~~g~---~~~~----~~~~~~~d~~~~sK~~~-~g~~~~g~~~~---~~~----~~~~~~~~~~~~~~~~~ 143 (266)
+||+|.++...+. .... ........+.++||.++ +| +|+||+++ +++ +.+.+.......+.+.+
T Consensus 213 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T 7aat_A 213 FDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG-ERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPP 291 (401)
T ss_dssp EEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred EccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccccc-CceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999988754432 1111 12223344566999999 88 99999875 444 33333322222333444
Q ss_pred HHHHHHHHHHHHHH------h--hccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHH
Q psy6547 144 PLACKLAMTALDVI------L--EENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYD 214 (266)
Q Consensus 144 ~~~~~a~~~~l~~~------~--~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 214 (266)
...+.++..+++.- . -++..++++++++++.+.|++ ++. ..+....+..|. +.|+.+ +.+.
T Consensus 292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~~~~------~~~~ 361 (401)
T 7aat_A 292 MNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKK-EGSSHNWQHITDQIGM---FCFTGL------KPEQ 361 (401)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCSCCHHHHHCCSS---EEECCC------CHHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCceecCCcce---EEecCC------CHHH
Confidence 55555555445311 1 134667788888888888887 432 123321223444 455432 2344
Q ss_pred HHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 215 VCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 215 ~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+...+.++||.+.++ +|++++.. +++++++++++|++++
T Consensus 362 ~~~ll~~~gi~v~~~----~Ris~~~~-~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 362 VERLTKEFSIYMTKD----GRISVAGV-ASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHCEECCTT----CEEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred HHHHHHhCCEeccCC----CeEEeccC-ChhhHHHHHHHHHHHh
Confidence 444446789999875 58987754 5555999999998875
No 161
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.82 E-value=2e-19 Score=156.78 Aligned_cols=223 Identities=14% Similarity=0.118 Sum_probs=155.5
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
...+.+++.++.+|++++++.+ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|+.+ ..+...
T Consensus 126 ~~~g~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~l~~~~~~~li~D~~~~~~-~~~~~~ 198 (398)
T 1gc0_A 126 GEFGVKLRHVDMADLQALEAAM--TPATRVIYFESPANPNMHMA----DIAGVAKIARKHGATVVVDNTYCTP-YLQRPL 198 (398)
T ss_dssp GGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHGGGTCEEEEECTTTHH-HHCCGG
T ss_pred HHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCcccc----cHHHHHHHHHHcCCEEEEECCCccc-ccCCch
Confidence 3456788899999999999999 45799999999999999886 7999999999999999999999633 122221
Q ss_pred ccccCCCCcCeeeeccccc-CCchhh-hhheecHHhhh-ccCCCCCC-CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALS-GGLYPI-SAVLADDEVMG-TLVPGTHG-STYGGNPLACKLAMTALDVILEENMIENAYKM 169 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~-~g~~~~-g~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 169 (266)
.++.++.+.+++|+++ +| .|+ |+++++++.++ .+...... .+.+.+++.+.++..+++.+ +...++..++
T Consensus 199 ---~~~~d~~~~S~sK~~~~~~-~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 272 (398)
T 1gc0_A 199 ---ELGADLVVHSATKYLSGHG-DITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL--NLRMDRHCAN 272 (398)
T ss_dssp ---GGTCSEEEEETTTTTTCSS-SCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH--HHHHHHHHHH
T ss_pred ---hhCceEEEECCccccCCCC-CCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH--HHHHHHHHHH
Confidence 2355666667999999 45 777 88888887654 44433233 34567888888777777643 2344555666
Q ss_pred HHHHHHHhhccccc------CCCc---------ccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc---C--
Q psy6547 170 GEIFRSELSSPANK------SKAS---------FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP---I-- 229 (266)
Q Consensus 170 ~~~l~~~l~~~~~~------~~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~-- 229 (266)
.+.+.+.|++ .+. +.+. ....+.|. ++.|.++. +.++..+.+.+.++.+.. +
T Consensus 273 ~~~l~~~L~~-~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~---~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~ 344 (398)
T 1gc0_A 273 AQVLAEFLAR-QPQVELIHYPGLASFPQYTLARQQMSQPGG---MIAFELKG----GIGAGRRFMNALQLFSRAVSLGDA 344 (398)
T ss_dssp HHHHHHHHHT-CTTEEEEEEC----------------CCTT---EEEEEETT----HHHHHHHHHHHCSSSEECSCCSCS
T ss_pred HHHHHHHHhc-CCCeeEEECCCCCCCcCHHHHHhhCCCCce---EEEEEECC----CHHHHHHHHHhCCCceeccCCCCc
Confidence 6667777665 221 1110 00123566 89998864 234566666777776543 1
Q ss_pred -------------------------CCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 230 -------------------------SNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 230 -------------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
..+.+|++++...++++++.+.+.|+++
T Consensus 345 ~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 345 ESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp SCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 1379999999999999998888888764
No 162
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.82 E-value=1.3e-19 Score=157.44 Aligned_cols=223 Identities=12% Similarity=0.018 Sum_probs=138.6
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++.+ |+++|++++ .+++++|++++++|++|.+. ++++|.++|++||+++|+||+|+ ++..
T Consensus 132 ~g~~~~~v~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~~~~li~D~a~~-~~~~- 203 (400)
T 3vax_A 132 RGFEVDFLTPGPSGRISVEGVMERL--RPDTLLVSLMHVNNETGVIQ----PVAELAQQLRATPTYLHVDAAQG-YGKV- 203 (400)
T ss_dssp TTCEEEEECCCTTCCCCHHHHHTTC--CTTEEEEECCSBCTTTCBBC----CHHHHHHHHTTSSCEEEEECTTT-TTTS-
T ss_pred cCCeEEEEccCCCCCcCHHHHHHhc--CCCceEEEEECCCCCceeeC----cHHHHHHHHHhcCCEEEEEhhhh-cCCC-
Confidence 46678888865 899999999 45789999999999999886 68999999999999999999995 2211
Q ss_pred cccccccCCCCcCeee--ecccccCCchhhhhhe-ecHH-hh---hccCCCC-------CCCCCCCcHHHHHHHHHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVI--LGKALSGGLYPISAVL-ADDE-VM---GTLVPGT-------HGSTYGGNPLACKLAMTALDV 156 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~-~~~~-~~---~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~ 156 (266)
..... .. +|+++ ++|.++ + .++|+++ ++++ +. +.+.... .....+.+...+.++.++++.
T Consensus 204 -~~~~~--~~-~d~~~~s~~K~~g-~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 277 (400)
T 3vax_A 204 -PGDLT--TP-IDMISISGHKIGA-P-KGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI 277 (400)
T ss_dssp -GGGGG--SC-CSEEEEETGGGTS-C-SSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH
T ss_pred -CcChh--hc-CcEEEEeHHHhCC-C-CceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH
Confidence 11222 22 56665 669554 3 3477777 6651 11 1222221 123445677777777788877
Q ss_pred Hhh--ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC----
Q psy6547 157 ILE--ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS---- 230 (266)
Q Consensus 157 ~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---- 230 (266)
+.. +++.++++++++++.+.|+. .+...........+. ++++.++. .+..++++.|. +||.++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~l~~~L~-~gi~v~~g~~~~~ 349 (400)
T 3vax_A 278 FEAEHAQWQVAAQDLRSRLLAGLAS-TSFQVNGDQDHVVPH---ILNLSFED---VDAEAFLVTLK-DLVAVATGSASTS 349 (400)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHTT-TTCEECSCTTSBCTT---EEEEECTT---CCHHHHHHHHH-HHHHHTTTTEEEE
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhCC-CCEEEeCCcccCCCC---EEEEEeCC---CCHHHHHHHHh-cCcEEEecccccC
Confidence 654 56788888888889888872 222111110112244 67776653 46788999999 999988742
Q ss_pred -------------------CCEEEEec-cCCCCHHHHHHHHHHHHHHHHH
Q psy6547 231 -------------------NNIIRLSP-ALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 231 -------------------~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.+++|+++ +...+++++++++++|++++++
T Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 350 ASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred CCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 48999999 8889999999999999988754
No 163
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.82 E-value=7.1e-20 Score=159.53 Aligned_cols=215 Identities=12% Similarity=0.050 Sum_probs=152.6
Q ss_pred CCHHHHHHHHhcCCCEEEEEE-ccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-cCCcCcccccccCCCCcC
Q psy6547 26 NDVDALEAKLKSNPNICAFMV-EPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPD 103 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~-~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~-~~~~g~~~~~~~~~~~~d 103 (266)
.|+++|++.+++. ++++|++ +|.++ ... ++++|.++|++||+++|+||+|++ +...|..... .. .+|
T Consensus 150 ~d~~~l~~~l~~~-~~~~v~~~~p~~~---~~~----~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~~-~~d 218 (407)
T 2dkj_A 150 IDLEEVRRLALEH-RPKVIVAGASAYP---RFW----DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP--LP-YAH 218 (407)
T ss_dssp CCHHHHHHHHHHH-CCSEEEECCSSCC---SCC----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC--TT-TCS
T ss_pred cCHHHHHHHHhhc-CCeEEEEeccccC---CCC----CHHHHHHHHHHcCCEEEEEccccccccccCccCCc--cc-ccc
Confidence 4799999999532 4677887 44432 333 589999999999999999999965 4223322111 11 245
Q ss_pred ee--eecccccCCchhhhhheec-HHhhhccCCC-CCCCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHH
Q psy6547 104 IV--ILGKALSGGLYPISAVLAD-DEVMGTLVPG-THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSE 176 (266)
Q Consensus 104 ~~--~~sK~~~~g~~~~g~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~ 176 (266)
++ ++||+++| .++|+++++ +++.+.+... ..+.+.+.++..++++.++++.+.. +++.++++++++++.+.
T Consensus 219 i~~~s~sK~l~g--~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (407)
T 2dkj_A 219 VVTSTTHKTLRG--PRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEE 296 (407)
T ss_dssp EEEEESSGGGCC--CSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCC--CCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 55 69998874 568999998 7887766532 2334445566666677777877543 56788888999999999
Q ss_pred hhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----------CCCEEEEeccC----CC
Q psy6547 177 LSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPAL----NI 242 (266)
Q Consensus 177 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~iR~~~~~----~~ 242 (266)
|++ ++...+. .++.|. ++++.++.. +.+..++.+.|.++||.+.++ ..+++|++++. ..
T Consensus 297 L~~-~g~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 369 (407)
T 2dkj_A 297 LAR-RGYRIVT--GGTDNH---LFLVDLRPK-GLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGF 369 (407)
T ss_dssp HHH-TTCEEGG--GSCSSS---EEEEECGGG-TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTC
T ss_pred HHh-CCceeec--CCCCce---EEEEECccc-CCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCC
Confidence 988 4321111 123566 899888641 236788999999999999864 24689999765 37
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy6547 243 TEQELREGLDIIINTINT 260 (266)
Q Consensus 243 t~~~i~~~~~~l~~~~~~ 260 (266)
+++++++++++|++++++
T Consensus 370 ~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 370 TPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 999999999999999877
No 164
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.82 E-value=2.3e-20 Score=165.60 Aligned_cols=227 Identities=11% Similarity=0.123 Sum_probs=148.9
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
...+.+++.++.+|+++|++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|... ....
T Consensus 193 ~~~G~~v~~v~~~d~~~l~~~i--~~~tk~v~l~~p~NptG~v~----~l~~i~~la~~~gi~livDea~~~g-~~~~-- 263 (464)
T 1ibj_A 193 PRSGVVVKRVNTTKLDEVAAAI--GPQTKLVWLESPTNPRQQIS----DIRKISEMAHAQGALVLVDNSIMSP-VLSR-- 263 (464)
T ss_dssp GGGTCEEEEECTTSHHHHHHHC--CSSEEEEEECSSCTTTCCCC----CHHHHHHHHHTTTCEEEEECTTTCT-TTCC--
T ss_pred HHcCCEEEEeCCCCHHHHHHHh--ccCceEEEEeCCCCCCCEee----cHHHHHHHHHHcCCEEEEECCCccc-ccCC--
Confidence 4467889999999999999999 45799999999999999986 7999999999999999999999531 1111
Q ss_pred ccccCCCCcCeeeecccccC--CchhhhhheecH-HhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALSG--GLYPISAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYK 168 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~~--g~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~ 168 (266)
... ++.+..+.++||++++ | +++|++++++ ++.+.+.........+.+++.+.++..+++.+.. +...++...
T Consensus 264 ~~~-~~~div~~S~sK~~~g~~G-l~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~ 341 (464)
T 1ibj_A 264 PLE-LGADIVMHSATKFIAGHSD-VMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARK 341 (464)
T ss_dssp GGG-TTCSEEEEETTTTTTCSSC-CCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred hhh-cCCEEEEECCcccccCCCC-CcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHH
Confidence 122 3444444469999985 7 7899999984 6766665322222344577777777776653211 112223333
Q ss_pred HHHHHHHHh--hcc----ccc-CCCc---ccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--------
Q psy6547 169 MGEIFRSEL--SSP----ANK-SKAS---FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-------- 230 (266)
Q Consensus 169 ~~~~l~~~l--~~~----~~~-~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------- 230 (266)
..+++.+.- ++. +.. +.+. ....+.|. +++|.+.. ......+++.|...||.++++.
T Consensus 342 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~---~~~~~l~~--~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p 416 (464)
T 1ibj_A 342 IAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGS---VFSFITGS--VALSKHLVETTKYFSIAVSFGSVKSLISMP 416 (464)
T ss_dssp HHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCS---EEEEECSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECT
T ss_pred HHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCce---EEEEEECC--HHHHHHHHHhcCcceEeecCCCCceeeecc
Confidence 333333210 010 110 0110 00123466 89999843 2234568888877777765442
Q ss_pred -------------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 231 -------------------NNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 231 -------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.+++|++++. |++++++++|++++++
T Consensus 417 ~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 417 CFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp TTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 4689999765 7899999999998864
No 165
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.81 E-value=1e-19 Score=159.16 Aligned_cols=241 Identities=11% Similarity=0.024 Sum_probs=155.0
Q ss_pred CCcCcccccCCCCCC-ceeecCC-------CHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCC
Q psy6547 5 TDPTSYNEFGPHMPG-YNIIPYN-------DVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNV 75 (266)
Q Consensus 5 ~~~~~~~~~~~~~~~-v~~~~~~-------d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~ 75 (266)
+||.....|.-.+.+ |...++. |.+.+.+.+++ .++++++++++.+|++|.+ ++.+.+++|.++|+++++
T Consensus 146 ~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~-~~~~~~~~i~~~~~~~~~ 224 (420)
T 4h51_A 146 TWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVD-PSQEQWNEIASLMLAKHH 224 (420)
T ss_dssp CCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTC
T ss_pred CchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCc
Confidence 344444445445554 3333332 56777777754 3467888888899999987 999999999999999999
Q ss_pred EEEEeccccCcCCcCcc---ccc----ccCCCCcCeeeeccccc-CCchhhhhheecHHhhhccC-------CCCCCCCC
Q psy6547 76 LFIADEVQTGLGRTGKL---LAI----HYEDVRPDIVILGKALS-GGLYPISAVLADDEVMGTLV-------PGTHGSTY 140 (266)
Q Consensus 76 ~li~De~~~~~~~~g~~---~~~----~~~~~~~d~~~~sK~~~-~g~~~~g~~~~~~~~~~~~~-------~~~~~~~~ 140 (266)
++|+||+|.+|...+.. +.. +.......+.+|||.++ .| +|+||+++..+..+... ........
T Consensus 225 ~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s 303 (420)
T 4h51_A 225 QVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS-ERAGTLSLLLKDKTKRADVKSVMDSLIREEYT 303 (420)
T ss_dssp EEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG-GCEEEEEEECSCHHHHHHHHHHHHHHHHTTTS
T ss_pred eEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc-CceEEEEecccCHHHHHHHHHHHHHhhhcccC
Confidence 99999999988543321 111 11112334456999999 88 99999887543322211 11123333
Q ss_pred CCcHHHHHHHHHHHHH------Hhh--ccHHHHHHHHHHHHHHHhhcccccC-CCcccEEecCccceeeEEEEeeCccch
Q psy6547 141 GGNPLACKLAMTALDV------ILE--ENMIENAYKMGEIFRSELSSPANKS-KASFKLSSGGLKKSINTLILSVSAILE 211 (266)
Q Consensus 141 ~~~~~~~~a~~~~l~~------~~~--~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (266)
.++..++.++...+.. ++. +.+.++++++++.+.+.|++ ++.. .+..-....|+ |.++-+ +
T Consensus 304 ~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~-~g~~~~~~~i~~q~Gm---F~~~gl------s 373 (420)
T 4h51_A 304 CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLR-LQTPGSWEHVINQIGM---FSFLGL------S 373 (420)
T ss_dssp SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCSSCCTHHHHCCSS---EEECCC------C
T ss_pred cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCCeecCCCce---EEecCc------C
Confidence 4455566666555542 111 34677788888888888887 5432 23221334576 655322 2
Q ss_pred HHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 212 VYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 212 ~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
. +.++.|+++||++.+++ ||+.. +.++++|++++++|.+++++..+
T Consensus 374 ~-e~v~~L~e~~Vy~~~~g----Ris~A-gl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 374 K-AQCEYCQNHNIFITVSG----RANMA-GLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp H-HHHHHHHHTTEECCTTC----EEEGG-GCCHHHHHHHHHHHHHHHC----
T ss_pred H-HHHHHHHhCCEEEcCCC----EEEec-cCCHHHHHHHHHHHHHHHHHhhc
Confidence 2 34678899999998864 88854 45899999999999999987654
No 166
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.6e-20 Score=165.90 Aligned_cols=235 Identities=9% Similarity=0.021 Sum_probs=159.0
Q ss_pred cCCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 13 FGPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 13 ~~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
...++.+++.++.+ |+++|++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|+++
T Consensus 175 ~~~~G~~~~~v~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~p~nptG~~~----~l~~i~~la~~~g~~livD~a~~~~ 248 (497)
T 3mc6_A 175 AYYFGMKLRHVELDPTTYQVDLGKVKKFI--NKNTVLLVGSAPNFPHGIAD----DIEGLGKIAQKYKLPLHVDSCLGSF 248 (497)
T ss_dssp HHHSCCEEEEECBCTTTCSBCTTTTGGGC--CSSEEEEEEETTCTTTCCCC----SCTTTTTHHHHTTCCEEEETTTTHH
T ss_pred HHHcCCeEEEEecCcccCcCCHHHHHHHH--hhCCEEEEEECCCCCCCcCC----CHHHHHHHHHHhCCEEEEECcchhh
Confidence 33456677887754 488999998 44689999999999999885 7889999999999999999999754
Q ss_pred CCc-------Cc--ccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCC----CCCC-----CC--CCcHHH
Q psy6547 87 GRT-------GK--LLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG----THGS-----TY--GGNPLA 146 (266)
Q Consensus 87 ~~~-------g~--~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~----~~~~-----~~--~~~~~~ 146 (266)
... |. .+.....+++....+++|++.+| .++|+++++.+........ .... ++ +.+...
T Consensus 249 ~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 327 (497)
T 3mc6_A 249 IVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAP-KGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAI 327 (497)
T ss_dssp HHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCC-SSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHH
T ss_pred hhhhhhhhcccCCccccccCCCCcEEEECchhhcCCC-CCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchh
Confidence 211 11 13333445444444467998888 8899998877655443211 1111 11 112223
Q ss_pred HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 147 CKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 147 ~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
.++..++++.++. +++.++..++++++++.|++.+. .+.......+. ++.|... +.+..++.+.|.++|
T Consensus 328 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~--g~~~~~~~~~~---~v~~~~~---~~~~~~l~~~L~~~G 399 (497)
T 3mc6_A 328 VVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIP--DLDIMGNPRYS---VISFSSK---TLNIHELSDRLSKKG 399 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT--TCEECSCCCSS---EEEEECT---TTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC--CEEEecCCCee---EEEEeCC---CCCHHHHHHHHHhCC
Confidence 4445555555544 34667778888889888887211 12110113344 6666543 346889999999999
Q ss_pred ceeccCC-CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 224 LVTKPIS-NNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 224 i~~~~~~-~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
|.+.... ...+|++++ .++++++++++++|++++++...
T Consensus 400 i~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 400 WHFNALQKPVALHMAFT-RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp CBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEEecCCCCCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9987653 467899988 77999999999999999987643
No 167
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.81 E-value=1.5e-19 Score=155.03 Aligned_cols=229 Identities=13% Similarity=0.006 Sum_probs=148.0
Q ss_pred CCCceeecC----CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--cCCcC
Q psy6547 17 MPGYNIIPY----NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--LGRTG 90 (266)
Q Consensus 17 ~~~v~~~~~----~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~--~~~~g 90 (266)
+.+++.++. .|+++|+++. +++++++++++|++|+.+++.+++++|+++|++||++||+||+|.. ....|
T Consensus 112 g~~~~~v~~~~~~~d~~~l~~~~----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 112 PIETILVGAADRLMTLDEIKALP----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp SCEEEECSCTTSCCCHHHHHTCC----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred CcEEEEecCCCCCcCHHHHhcCc----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 344555553 3788888763 3788888888888744559999999999999999999999999841 11112
Q ss_pred cccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCC--CCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILEENMIENAYK 168 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 168 (266)
........+.+.-+.++||+++++ . .|++++++++++.+.... ...........++++..+++... + ..++..+
T Consensus 188 ~~~~~~~~~~d~~~~s~sK~~~~~-~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~ 263 (357)
T 3lws_A 188 KTAAEIAGLFDSIYISFYKGLGGI-A-GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRK-D-RMGQYYE 263 (357)
T ss_dssp CCHHHHHTTSSEEEEESSSTTCCS-S-CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHT-T-CHHHHHH
T ss_pred CChHHHHhcCCEEEEeccccCCCC-c-eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHH-H-HHHHHHH
Confidence 111100112222345799999644 2 388899998887765321 22222222334444556666532 2 2345677
Q ss_pred HHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC-----CCEEEEecc---C
Q psy6547 169 MGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS-----NNIIRLSPA---L 240 (266)
Q Consensus 169 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~~iR~~~~---~ 240 (266)
+++++.+.|++ +....+.. .+..+. ++|+.++.....+..++.+.|.++||.++++. ..++|++.. .
T Consensus 264 ~~~~l~~~L~~-~~g~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~ 338 (357)
T 3lws_A 264 QAKQLAEQFNA-LPGVHTTP-EVPVSN---MFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYG 338 (357)
T ss_dssp HHHHHHHHHHT-STTEEEES-SSCSSS---EEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGG
T ss_pred HHHHHHHHHHh-CCCCeecc-CCCcce---EEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhh
Confidence 78888888887 42211100 123456 89999876211346789999999999998762 248999865 3
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy6547 241 NITEQELREGLDIIINTI 258 (266)
Q Consensus 241 ~~t~~~i~~~~~~l~~~~ 258 (266)
..+++++++++++|.+++
T Consensus 339 ~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 339 ELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp GSCHHHHHHHHHHHHHHC
T ss_pred hcCHHHHHHHHHHHHHhc
Confidence 468999999999998764
No 168
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.81 E-value=1.3e-19 Score=157.82 Aligned_cols=218 Identities=14% Similarity=0.109 Sum_probs=151.6
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCC-CcCe
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDI 104 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~-~~d~ 104 (266)
.|+++|++.+++. ++++|++++.+ .|... ++++|+++|++||+++|+||+|+ ++..+.... ...+ .+|+
T Consensus 150 ~d~~~l~~~i~~~-~~~~v~~~~~~--~~~~~----~l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~~--~~~~~~~di 219 (405)
T 2vi8_A 150 IDYDDVREKARLH-RPKLIVAAAAA--YPRII----DFAKFREIADEVGAYLMVDMAHI-AGLVAAGLH--PNPVPYAHF 219 (405)
T ss_dssp BCHHHHHHHHHHH-CCSEEEECCSS--CCSCC----CHHHHHHHHHHHTCEEEEECTTT-HHHHHTTSS--CCSTTTCSE
T ss_pred cCHHHHHHHHHhc-CCeEEEEeCCC--CCccC----CHHHHHHHHHHcCCEEEEEcccc-ccccccCcC--CCccccCCE
Confidence 3899999999542 46788876533 23332 68999999999999999999996 322221111 1111 3566
Q ss_pred e--eecccccCCchhhhhheecHHhhhccCCCCCCCCC-CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhh
Q psy6547 105 V--ILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTY-GGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELS 178 (266)
Q Consensus 105 ~--~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 178 (266)
+ ++||+++|+ .. |++++++++.+.+........+ +.++..++++.++++.+.. +++.++++++++++.+.|+
T Consensus 220 ~~~s~sK~~~g~-~g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 297 (405)
T 2vi8_A 220 VTTTTHKTLRGP-RG-GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQ 297 (405)
T ss_dssp EEEESSSTTCCC-SC-EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCC-CC-eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5 699999865 44 9999998887666532222223 3356666666777876554 5678889999999999998
Q ss_pred cccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----------CCCEEEEeccC----CCCH
Q psy6547 179 SPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPAL----NITE 244 (266)
Q Consensus 179 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~iR~~~~~----~~t~ 244 (266)
+ ++..... ..+.+. ++++.++.. +.+..++.+.|.++||.++++ ..+++|++++. .+++
T Consensus 298 ~-~g~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~ 370 (405)
T 2vi8_A 298 N-EGFTLVS--GGTDNH---LLLVDLRPQ-QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGL 370 (405)
T ss_dssp H-TTCEEGG--GSCSSS---EEEEECGGG-TCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCH
T ss_pred h-CCCeEec--CCCCce---EEEEEccCC-CCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCH
Confidence 8 4321111 113456 888888641 235788999999999999864 24689999886 5789
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy6547 245 QELREGLDIIINTINTMA 262 (266)
Q Consensus 245 ~~i~~~~~~l~~~~~~~~ 262 (266)
+++++++++|++++++..
T Consensus 371 ~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 371 EEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp HHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999999987653
No 169
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.81 E-value=1.5e-19 Score=154.57 Aligned_cols=227 Identities=15% Similarity=0.127 Sum_probs=146.7
Q ss_pred CCCCCceeecCC----CHHHHHHHHhcCC-----CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 15 PHMPGYNIIPYN----DVDALEAKLKSNP-----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 15 ~~~~~v~~~~~~----d~~~l~~~l~~~~-----~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
..+.+++.++.+ |+++|++.+++++ ++++|+++++ +++|.+ ++.+++++|+++|++||+++|+||+|.+
T Consensus 111 ~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~ 188 (359)
T 1svv_A 111 ATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQ-YTKQELEDISASCKEHGLYLFLDGARLA 188 (359)
T ss_dssp HTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCC-CCHHHHHHHHHHHHHHTCEEEEECTTHH
T ss_pred cCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCcee-cCHHHHHHHHHHHHHhCCEEEEEccchh
Confidence 346688888876 4999999996541 4889988877 567776 7889999999999999999999999955
Q ss_pred c--CCcCcccccccCC--CCcCeee--ecccccCCchhhhhheecHHhhhccCCCC--CCCCCCCcHHHHHHHHHHHHHH
Q psy6547 86 L--GRTGKLLAIHYED--VRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 86 ~--~~~g~~~~~~~~~--~~~d~~~--~sK~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
| +..+.. ....+ ..+|+.+ .+|. ++. ...|++++++++.+.+.... ...++..+.....+...+++..
T Consensus 189 ~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (359)
T 1svv_A 189 SALSSPVND--LTLADIARLTDMFYIGATKA-GGM-FGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDN 264 (359)
T ss_dssp HHHTSTTCC--CCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTT
T ss_pred hhhcCCCcc--hhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhh
Confidence 4 332221 11101 1345555 5675 333 45678888888776654321 2222222222222222223211
Q ss_pred hhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC-Cceecc---CCCCE
Q psy6547 158 LEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA-GLVTKP---ISNNI 233 (266)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~---~~~~~ 233 (266)
.-+++.++++++++++.+.| + .. .+....+..+. ++++.++ .+++++|.++ ||.+.+ ...++
T Consensus 265 ~~~~~~~~~~~~~~~l~~~L-~-~~--~~~~~~~~~~~---~~~~~~~-------~~~~~~l~~~~gi~v~~~~~~~~~~ 330 (359)
T 1svv_A 265 LFFELGAHSNKMAAILKAGL-E-AC--GIRLAWPSASN---QLFPILE-------NTMIAELNNDFDMYTVEPLKDGTCI 330 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-H-HT--TCCBSSCCSSS---EECBEEE-------HHHHHHHTTTEECEEEEEETTTEEE
T ss_pred hHHHHHHHHHHHHHHHHHHh-c-cC--CeEEccCCccc---eEEEEcC-------HHHHHHHHHhcCEEEEecccCCCce
Confidence 11346778888888888888 4 22 22210123345 6666553 3688999988 999854 24579
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 234 iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+|++++..++++++++++++|+++++++
T Consensus 331 iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 331 MRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred EEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 9999988899999999999999987653
No 170
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.81 E-value=2.7e-19 Score=153.02 Aligned_cols=222 Identities=10% Similarity=0.045 Sum_probs=144.7
Q ss_pred CCCceeecCC----CHHHHHH-HHhcC-----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 17 MPGYNIIPYN----DVDALEA-KLKSN-----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 17 ~~~v~~~~~~----d~~~l~~-~l~~~-----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+.+++.++.+ |+++|++ ++++. +++++|++++++ ++|.+ ++.+++++|+++|++||+++|+||+|..+
T Consensus 108 g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 185 (356)
T 1v72_A 108 GAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSI-YTLDEIEAIGDVCKSSSLGLHMDGSRFAN 185 (356)
T ss_dssp SCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCC-CCHHHHHHHHHHHHHTTCEEEEEETTHHH
T ss_pred CcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCcc-CCHHHHHHHHHHHHHcCCeEEEEchhhHh
Confidence 5567777654 7999999 88542 268999998865 47765 89999999999999999999999999543
Q ss_pred C--CcCcccccccCC--CCcCee--eecccccCCchhhh--hheecHHhhhccCCC-CCCCCCCCcHHHHHHHHHHHHHH
Q psy6547 87 G--RTGKLLAIHYED--VRPDIV--ILGKALSGGLYPIS--AVLADDEVMGTLVPG-THGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 87 ~--~~g~~~~~~~~~--~~~d~~--~~sK~~~~g~~~~g--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
. ..|.. ....+ ...|++ ++||+ | .|.| ++++++++.+.+... .+....... ...++..+++.+
T Consensus 186 ~~~~~~~~--~~~~~~~~~~d~~~~s~sK~---g-~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 257 (356)
T 1v72_A 186 ALVSLGCS--PAEMTWKAGVDALSFGATKN---G-VLAAEAIVLFNTSLATEMSYRRKRAGHLSSK--MRFLSAQIDAYL 257 (356)
T ss_dssp HHHHHTCC--TTTTTGGGTCCEEEECCGGG---T-CSSCEEEEESSGGGHHHHHHHHHHTTCCCSS--THHHHHHHHHHT
T ss_pred HhccCCCC--HHHhhhhhcCCEEEEecccC---C-CcCccEEEEECHHHHhhHHHHhhccCchhhh--HHHHHHHHHHHH
Confidence 1 11211 11111 123443 48898 3 3566 777788877655421 111222111 112222334444
Q ss_pred hhc---cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--CC
Q psy6547 158 LEE---NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--NN 232 (266)
Q Consensus 158 ~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~ 232 (266)
+.+ ++.++++++++++++.|++ +. .+....+..+. ++|+.++ .+++++|.++||.+.++. .+
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~~~---~~~~~~~-------~~~~~~l~~~gi~v~~g~~~~~ 324 (356)
T 1v72_A 258 TDDLWLRNARKANAAAQRLAQGLEG-LG--GVEVLGGTEAN---ILFCRLD-------SAMIDALLKAGFGFYHDRWGPN 324 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHTT-CT--TEEEESCCCSS---EEEEEEC-------HHHHHHHHHTTCBCBCSSSSTT
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhh-CC--CcEEccCCCcc---EEEEEcC-------HHHHHHHHhcCeEEeccccCCC
Confidence 332 3556677788888888876 32 12110123345 7777663 268999999999998653 68
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
++|++++..++++++++++++|++++++.
T Consensus 325 ~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 325 VVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999887653
No 171
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.80 E-value=3.8e-19 Score=154.79 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=153.0
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..++.+++.++.+|+++|++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|+.. ....
T Consensus 127 ~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~g~~li~D~~~~~~-~~~~-- 197 (392)
T 3qhx_A 127 TGWNVEYTPVALADLDAVRAAI--RPTTRLIWVETPTNPLLSIA----DIAGIAQLGADSSAKVLVDNTFASP-ALQQ-- 197 (392)
T ss_dssp GGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHHTCEEEEECTTTCT-TTCC--
T ss_pred HhcCcEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCcEEe----cHHHHHHHHHHcCCEEEEECCCccc-ccCC--
Confidence 5668899999999999999999 45799999999999999886 6999999999999999999999532 1111
Q ss_pred ccccCCCCcCeee--ecccccC-Cchhhhhheec-HHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVI--LGKALSG-GLYPISAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKM 169 (266)
Q Consensus 94 ~~~~~~~~~d~~~--~sK~~~~-g~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 169 (266)
..+..+|+++ ++|.+++ |..++|+++++ +++.+.+...........+++.+.++...++.+. ...++..++
T Consensus 198 ---~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~--~~~~~~~~~ 272 (392)
T 3qhx_A 198 ---PLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTLV--LRMQRHSEN 272 (392)
T ss_dssp ---GGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHH
T ss_pred ---hHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHH--HHHHHHHHH
Confidence 1223455555 9999995 32578999887 5777666544444556678888877776665432 234555666
Q ss_pred HHHHHHHhhccccc------CCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-----
Q psy6547 170 GEIFRSELSSPANK------SKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----- 229 (266)
Q Consensus 170 ~~~l~~~l~~~~~~------~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----- 229 (266)
.+.+.+.|++ ... +.+.. ..++.|. +++|.++.. ....+.|...|...++.+..+
T Consensus 273 ~~~l~~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~---~~~~~l~~~-~~~~~~~~~~l~~~~~~~s~G~~~sl 347 (392)
T 3qhx_A 273 AAAVAEFLAE-HPAISTVLYPGLPSHPGHAVAARQMRGFGG---MVSVRMRAG-RTAAEQLCAKTNIFILAESLGSVESL 347 (392)
T ss_dssp HHHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEETTC-HHHHHHHHHHCSSSEECSCCCCSSCE
T ss_pred HHHHHHHHhc-CCCcceEECCCCCCCCCHHHHHHhCCCCce---EEEEEeCCc-HHHHHHHHHhCCCceECCCCCCCCce
Confidence 6677777765 221 11111 0134577 999999751 235677887777666554422
Q ss_pred -------------------CCCEEEEeccCCCCHHHHHHHHHHH
Q psy6547 230 -------------------SNNIIRLSPALNITEQELREGLDII 254 (266)
Q Consensus 230 -------------------~~~~iR~~~~~~~t~~~i~~~~~~l 254 (266)
..+.||+|++...+++.++.+.+.|
T Consensus 348 ~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 348 IEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp EECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred eeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 2467999977776666555555544
No 172
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.79 E-value=4.3e-18 Score=149.56 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=155.6
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcC----------CEEEE
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN----------VLFIA 79 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g----------~~li~ 79 (266)
.+.+++.++.+ |+++|++.+ .+++++|++++++|++|.+. ++++|.++|+++| +++|+
T Consensus 147 ~g~~v~~v~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~~~~i~~l~~~~~~~~~~~~~~~~~liv 220 (432)
T 3a9z_A 147 QVAEVTFVPVSKVNGQVEVEDILAAV--RPTTCLVTIMLANNETGVIM----PISEISRRIKALNQIRAASGLPRVLVHT 220 (432)
T ss_dssp TSCEEEEECCCTTTSSCCHHHHHHTC--CTTEEEEECCSBCTTTCBBC----CHHHHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred cCcEEEEEecCcccCCcCHHHHHHhc--cCCceEEEEECcccCccccc----CHHHHHHHHHhcCcccccccCCceEEEE
Confidence 35677888753 789999998 45789999999999999986 6789999999999 99999
Q ss_pred eccccCcCCcCcccccccCCCCcCeee--ecccccCCchhhhhheecHHh-hhccCCCC-------CCCCCCCcHHHHHH
Q psy6547 80 DEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEV-MGTLVPGT-------HGSTYGGNPLACKL 149 (266)
Q Consensus 80 De~~~~~~~~g~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~a 149 (266)
||+|. ++.. .+..... .+|+++ ++|++| .++|+++++++. .+.+.... ....++.++..+++
T Consensus 221 Dea~~-~~~~--~~~~~~~--~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 292 (432)
T 3a9z_A 221 DAAQA-LGKR--RVDVEDL--GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAG 292 (432)
T ss_dssp ECTTT-TTTS--CCCHHHH--CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHH
T ss_pred Echhh-hCCc--ccChhhc--CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHH
Confidence 99994 3322 1222222 345544 699873 469999998765 33343321 22345677888888
Q ss_pred HHHHHHHHhh--ccHHHHHHHHHHHHHHHhhcccccCCC-cc---cEEecCccceeeEEEEeeCccchHHHHHHHHH---
Q psy6547 150 AMTALDVILE--ENMIENAYKMGEIFRSELSSPANKSKA-SF---KLSSGGLKKSINTLILSVSAILEVYDVCIKMK--- 220 (266)
Q Consensus 150 ~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~--- 220 (266)
+.++++.+.. +++.++++++++++.+.|++..+.... .. .....+. +++|.++.. +.+..++.+.+.
T Consensus 293 ~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~i~ 368 (432)
T 3a9z_A 293 LGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPN---TCNFSIQGS-QLRGYMVLAQCQTLL 368 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTT---EEEEEECST-TCCHHHHHHHCSSEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCC---EEEEEeCCC-CCcHHHHHHHhcCeE
Confidence 8888887654 567888889999999998872121110 00 0123455 777877652 123555665542
Q ss_pred -HCCceecc-------------C-----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 221 -DAGLVTKP-------------I-----SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 221 -~~gi~~~~-------------~-----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+.|+.+.+ + ..+++|++++..+|++++++++++|+++++++.
T Consensus 369 ~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 369 ASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp CBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 12332222 1 137999999988899999999999999987754
No 173
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.79 E-value=8.3e-19 Score=152.81 Aligned_cols=221 Identities=12% Similarity=0.078 Sum_probs=150.4
Q ss_pred CCCCceeecC------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC-C
Q psy6547 16 HMPGYNIIPY------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG-R 88 (266)
Q Consensus 16 ~~~~v~~~~~------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~-~ 88 (266)
.+.+++.++. .|+++|++.++ +++++|+++ +++|.+. ++++|.++|+++|+++|+||+|+.+. .
T Consensus 123 ~g~~~~~~~~~~~~~~~d~~~l~~~i~--~~~~~v~~~---n~tG~~~----~l~~i~~l~~~~~~~li~Dea~~~g~~~ 193 (399)
T 2oga_A 123 TGATPVPVEPHEDHPTLDPLLVEKAIT--PRTRALLPV---HLYGHPA----DMDALRELADRHGLHIVEDAAQAHGARY 193 (399)
T ss_dssp TTCEEEEECBCSSSSSBCHHHHHHHCC--TTEEEECCB---CGGGCCC----CHHHHHHHHHHHTCEECEECTTCTTCEE
T ss_pred CCCEEEEEecCCCCCCcCHHHHHHhcC--CCCeEEEEe---CCcCCcc----CHHHHHHHHHHcCCEEEEECcccccCcc
Confidence 4556666653 37999999993 468888754 4567664 69999999999999999999996331 1
Q ss_pred cCcccccccCCCCcCeeee----cccccC-Cchhhhhheec-HHhhhccCCCCC------------CCCCCCcHHHHHHH
Q psy6547 89 TGKLLAIHYEDVRPDIVIL----GKALSG-GLYPISAVLAD-DEVMGTLVPGTH------------GSTYGGNPLACKLA 150 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~----sK~~~~-g~~~~g~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~a~ 150 (266)
.+. ..+..+|++++ ||++++ | ++|+++++ +++.+.+..... ..++..+++.++++
T Consensus 194 ~~~-----~~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~ 266 (399)
T 2oga_A 194 RGR-----RIGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVL 266 (399)
T ss_dssp TTE-----ETTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHH
T ss_pred CCe-----ecccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHH
Confidence 121 12323577775 599986 5 68888875 677654432101 22345678888888
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccce-eeEEEEeeCccchHHHHHHHHHHCCceeccC
Q psy6547 151 MTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKS-INTLILSVSAILEVYDVCIKMKDAGLVTKPI 229 (266)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 229 (266)
.++++.++ .+.++.+++.+++++.|++ +....+.. .+..+. + ++.+.+.. .+..++.+.|.++||.+++.
T Consensus 267 ~~~l~~~~--~~~~~~~~~~~~l~~~L~~-~~g~~~~~-~~~~~~--~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~ 337 (399)
T 2oga_A 267 RIRLAHLD--SWNGRRSALAAEYLSGLAG-LPGIGLPV-TAPDTD--PVWHLFTVRT---ERRDELRSHLDARGIDTLTH 337 (399)
T ss_dssp HHHHHTHH--HHHHHHHHHHHHHHHHTTT-CTTCBCCC-CCTTEE--CCCSSEEEEC---SSHHHHHHHHHHTTBCCBCS
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHhcc-CCCccccC-CCCCCc--ceeEEEEEEC---CCHHHHHHHHHHCCCceecC
Confidence 88887653 3567777888888888887 43211111 111122 0 22244332 25788999999999999864
Q ss_pred CC---------------------------CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 SN---------------------------NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ~~---------------------------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.. +++|++++..+|+++++++++.|+++++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 338 YPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp CSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 31 579999999999999999999999998764
No 174
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.79 E-value=5.6e-18 Score=148.26 Aligned_cols=219 Identities=16% Similarity=0.121 Sum_probs=148.0
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL 92 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~ 92 (266)
....+.+++.++.+ +++|++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|+.++.....
T Consensus 116 ~~~~g~~~~~~~~~-~~~l~~~i--~~~~~~v~~~~~~n~~G~~~----~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~ 188 (412)
T 2cb1_A 116 LSLMGVTVRYVDPE-PEAVREAL--SAKTRAVFVETVANPALLVP----DLEALATLAEEAGVALVVDNTFGAAGALCRP 188 (412)
T ss_dssp TTTTTCEEEEECSS-HHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHHTCEEEEECGGGTTTTSCCG
T ss_pred HHHcCCEEEEECCC-HHHHHHHh--ccCCeEEEEeCCCCCCcccc----cHHHHHHHHHHcCCEEEEECCCccccccCCc
Confidence 34567788888874 99999999 45799999999999999986 7999999999999999999999755211121
Q ss_pred cccccCCCCcCeee--eccccc-CCchhhhhheecH-H---------------------------hhhccCCCC-CCCCC
Q psy6547 93 LAIHYEDVRPDIVI--LGKALS-GGLYPISAVLADD-E---------------------------VMGTLVPGT-HGSTY 140 (266)
Q Consensus 93 ~~~~~~~~~~d~~~--~sK~~~-~g~~~~g~~~~~~-~---------------------------~~~~~~~~~-~~~~~ 140 (266)
. ...+|+++ ++|+++ +| .|+|+++..+ + +.+.++... .....
T Consensus 189 --~---~~~~di~~~S~~K~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~ 262 (412)
T 2cb1_A 189 --L---AWGAHVVVESLTKWASGHG-SVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGM 262 (412)
T ss_dssp --G---GGTCSEEEEETTTTTTCSS-CCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCC
T ss_pred --c---ccCCeEEEECCcccccCCC-CcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCC
Confidence 1 22355554 999997 46 7888877543 2 222222111 11122
Q ss_pred CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCC-C--cccE------------EecCccceeeEEEEe
Q psy6547 141 GGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANKSK-A--SFKL------------SSGGLKKSINTLILS 205 (266)
Q Consensus 141 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~--~~~~------------~~~g~~~~~~~~~~~ 205 (266)
..++..+..+...++.+ +...++..++.+++.+.|.+ ..... + +... .+.|. ++.|.+
T Consensus 263 ~~~~~~a~~~~~~l~~l--~~~~~~~~~~~~~l~~~L~~-~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~---iv~~~~- 335 (412)
T 2cb1_A 263 ALSPFNAYLLFQGLETV--ALRVARMSETARFLAERLQG-HPKVKALRYPGLPEDPAHRNARKYLASGGP---ILTLDL- 335 (412)
T ss_dssp CCCHHHHHHHHHHGGGH--HHHHHHHHHHHHHHHHHHHT-CTTCSEEECTTSTTCTTHHHHHHHCSSSCS---EEEEEC-
T ss_pred CCChHHhHHHHcCCchH--HHHHHHHHHHHHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHHhCCCCce---EEEEEe-
Confidence 44666666655555443 23445566788888888877 32211 1 1000 23455 888888
Q ss_pred eCccchHHHHHHHHHHCCceeccCC------------------------------CCEEEEeccCCCCHHHHHHHHHHHH
Q psy6547 206 VSAILEVYDVCIKMKDAGLVTKPIS------------------------------NNIIRLSPALNITEQELREGLDIII 255 (266)
Q Consensus 206 ~~~~~~~~~~~~~l~~~gi~~~~~~------------------------------~~~iR~~~~~~~t~~~i~~~~~~l~ 255 (266)
. +.+++.+.|.+.||.+ .++ .+.+|+|++..+++++++.+.+.|+
T Consensus 336 ~----~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 336 G----DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp S----SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 4 4566777787889886 331 5799999999999999999988886
Q ss_pred H
Q psy6547 256 N 256 (266)
Q Consensus 256 ~ 256 (266)
+
T Consensus 411 ~ 411 (412)
T 2cb1_A 411 A 411 (412)
T ss_dssp C
T ss_pred h
Confidence 4
No 175
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.78 E-value=1e-18 Score=151.52 Aligned_cols=225 Identities=14% Similarity=0.146 Sum_probs=151.5
Q ss_pred CCCCCceeecC------CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-cC
Q psy6547 15 PHMPGYNIIPY------NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LG 87 (266)
Q Consensus 15 ~~~~~v~~~~~------~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~-~~ 87 (266)
..+.+++.++. .|+++|++.++ +++++|++++ ++|.+. ++++|.++|+++|+++|+||+|+. +.
T Consensus 98 ~~g~~~~~v~~~~~~~~~d~~~l~~~l~--~~~~~v~~~~---~~G~~~----~~~~i~~l~~~~~~~li~D~a~~~g~~ 168 (393)
T 1mdo_A 98 LLGANPVMVDVDRDTLMVTPEHIEAAIT--PQTKAIIPVH---YAGAPA----DLDAIYALGERYGIPVIEDAAHATGTS 168 (393)
T ss_dssp HTTCEEEEECBCTTTCCBCHHHHHHHCC--TTEEEECCBC---GGGCCC----CHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred HCCCEEEEEeccCCcCCCCHHHHHHhcC--CCceEEEEeC---CCCCcC----CHHHHHHHHHHcCCeEEEECccccCCe
Confidence 34566777763 37999999994 4688888775 355554 799999999999999999999963 32
Q ss_pred CcCcccccccCCCCcCeeeec----ccccCCchhhhhheec-HHhhhccCCCCC------------------------CC
Q psy6547 88 RTGKLLAIHYEDVRPDIVILG----KALSGGLYPISAVLAD-DEVMGTLVPGTH------------------------GS 138 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~s----K~~~~g~~~~g~~~~~-~~~~~~~~~~~~------------------------~~ 138 (266)
..+.. .+. .|++++| |++++| ++|+++.+ +++.+.+..... +.
T Consensus 169 ~~~~~-----~~~-~d~~~~S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 240 (393)
T 1mdo_A 169 YKGRH-----IGA-RGTAIFSFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGY 240 (393)
T ss_dssp ETTEE-----TTS-SSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCC
T ss_pred ECCee-----cCC-CCeEEEeCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCc
Confidence 22221 222 6676655 888765 68898886 676655432111 01
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCC--Cc-ccEEecCccceeeEEEEeeC-ccchHHH
Q psy6547 139 TYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANKSK--AS-FKLSSGGLKKSINTLILSVS-AILEVYD 214 (266)
Q Consensus 139 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~-~~~~~~g~~~~~~~~~~~~~-~~~~~~~ 214 (266)
.+..+++.++++...++.+ ++..++.+++.+++++.|.+ ++... .+ ....+.+. ++++.++.. .+.+..+
T Consensus 241 ~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~ 314 (393)
T 1mdo_A 241 KYNLPDLNAAIALAQLQKL--DALNARRAAIAAQYHQAMAD-LPFQPLSLPSWEHIHAWH---LFIIRVDEARCGITRDA 314 (393)
T ss_dssp BCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHT-SSCEECCCCSSCEECCCS---CEEEECCHHHHSSCHHH
T ss_pred cCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCCCceeE---EEEEEecccccccCHHH
Confidence 1234666666666655543 34667777788888888887 44111 11 01234455 788888630 0236788
Q ss_pred HHHHHHHCCceeccCC-------------------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 215 VCIKMKDAGLVTKPIS-------------------------NNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 215 ~~~~l~~~gi~~~~~~-------------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+.+.|.++||.++++. .+.+|++++..+|++++++++++|+++++...
T Consensus 315 l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 315 LMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp HHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999988642 23799999888999999999999999877654
No 176
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.78 E-value=1e-18 Score=152.64 Aligned_cols=224 Identities=15% Similarity=0.132 Sum_probs=146.4
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcC-CEEEEeccccCcCCcCcc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN-VLFIADEVQTGLGRTGKL 92 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g-~~li~De~~~~~~~~g~~ 92 (266)
...+.+++.++.+|++++++.+ .+++++|++++++|++|.+. ++++|.++|+++| +++|+||+|+.+. .+.+
T Consensus 127 ~~~G~~v~~v~~~d~~~l~~~i--~~~t~~v~~~~p~nptG~~~----~l~~i~~la~~~g~~~livD~~~~~~~-~~~~ 199 (403)
T 3cog_A 127 SEFGLKISFVDCSKIKLLEAAI--TPETKLVWIETPTNPTQKVI----DIEGCAHIVHKHGDIILVVDNTFMSPY-FQRP 199 (403)
T ss_dssp GGGTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHTSSSCCEEEEECTTTCTT-TCCT
T ss_pred HHcCCEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeee----CHHHHHHHHHHcCCCEEEEECCCcccc-cCCc
Confidence 3467889999999999999999 45799999999999999986 6999999999999 9999999996542 1222
Q ss_pred cccccCCCCcCeeeecccccC-Cchhhhhheec-HHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q psy6547 93 LAIHYEDVRPDIVILGKALSG-GLYPISAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMG 170 (266)
Q Consensus 93 ~~~~~~~~~~d~~~~sK~~~~-g~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 170 (266)
+ . ++.+..+.+++|++++ |..++|+++++ +++.+.+...........+++.+.++..+++.+.. ..++..++.
T Consensus 200 ~--~-~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~n~ 274 (403)
T 3cog_A 200 L--A-LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHV--RMEKHFKNG 274 (403)
T ss_dssp T--T-TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHH
T ss_pred c--c-cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHH
Confidence 1 1 2333334469999993 31468999984 67766665433333445678887777777654321 233333444
Q ss_pred HHHHHHhhcccc------cCCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc---C---
Q psy6547 171 EIFRSELSSPAN------KSKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP---I--- 229 (266)
Q Consensus 171 ~~l~~~l~~~~~------~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~--- 229 (266)
..+.+.+++ .. .+.+.. ...+.|. ++.|.++. ..++..+.|.+.|+++.. +
T Consensus 275 ~~l~~~l~~-~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~---~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~~ 346 (403)
T 3cog_A 275 MAVAQFLES-NPWVEKVIYPGLPSHPQHELVKRQCTGCTG---MVTFYIKG----TLQHAEIFLKNLKLFTLAESLGGFE 346 (403)
T ss_dssp HHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCS---EEEEEESS----CHHHHHHHHHHCSSSEECSCCSSSS
T ss_pred HHHHHHHhc-CCCEEEEECCCCCCCCcHHHHHhcCCCCce---EEEEEecC----CHHHHHHHHHhCCcceEccCCCCcc
Confidence 444444443 10 111111 0113366 88888764 224556666777875431 1
Q ss_pred ------------------------CCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 230 ------------------------SNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 230 ------------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
..+.+|++++...+++.++.+.+.|+++
T Consensus 347 sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 347 SLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAA 398 (403)
T ss_dssp CEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 1479999998877777666666666544
No 177
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.78 E-value=1.3e-18 Score=150.01 Aligned_cols=224 Identities=14% Similarity=0.150 Sum_probs=150.0
Q ss_pred cCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 13 FGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 13 ~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+...+.+++.++.+ |+++|++.+ .+++++++ ++|++|.+. ++++|.++|++||+++|+||+|+.+.
T Consensus 95 ~~~~g~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~v~---~~n~~G~~~----~~~~i~~~~~~~~~~li~D~~~~~g~ 165 (374)
T 3uwc_A 95 IVQAGATPVLVDSENGYVIDPEKIEAAI--TDKTKAIM---PVHYTGNIA----DMPALAKIAKKHNLHIVEDACQTILG 165 (374)
T ss_dssp HHHTTCEEEEECBCTTSSBCGGGTGGGC--CTTEEEEC---CBCGGGCCC----CHHHHHHHHHHTTCEEEEECTTCTTC
T ss_pred HHHcCCEEEEEecCCCCCcCHHHHHHhC--CCCceEEE---EeCCcCCcC----CHHHHHHHHHHcCCEEEEeCCCccCc
Confidence 34456778888876 899999988 44688887 445677765 79999999999999999999996321
Q ss_pred CcCcccccccCCCCcCeeeec----ccccC-CchhhhhheecH-HhhhccCCC------------CCCCCCCCcHHHHHH
Q psy6547 88 RTGKLLAIHYEDVRPDIVILG----KALSG-GLYPISAVLADD-EVMGTLVPG------------THGSTYGGNPLACKL 149 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~s----K~~~~-g~~~~g~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~a 149 (266)
.+.....+..+|++++| |++++ | . .|+++++. .+.+.+... ....++..+++.+++
T Consensus 166 ----~~~~~~~~~~~d~~~~s~~~~K~l~~~g-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
T 3uwc_A 166 ----RINDKFVGSWGQFACFSLHPLKNLNVWS-D-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVI 239 (374)
T ss_dssp ----EETTEETTSSSSEEEEECSSSSSSCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHH
T ss_pred ----eeCCeeccccccEEEEeCCCCCcCCccc-e-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHH
Confidence 12223334446887766 99987 7 4 77777654 454333211 112333445555555
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEE-ecCccceeeEEEEeeCccchHHHHHHHHHHCCceec
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLS-SGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK 227 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 227 (266)
....++.+ +++.++.+++.+++++.|++ ++. ..+..... .... ++.+.+.. .+..++.+.|.++||.++
T Consensus 240 ~~~~~~~~--~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~l~~~L~~~gi~v~ 310 (374)
T 3uwc_A 240 ANRLMNQL--ETITEKRRGIAHLYDQSFVD-LSEFIDVPVRREGVYHV---FHIYVLRV---KYRDQLFQYLKDNGIEVK 310 (374)
T ss_dssp HHHHGGGH--HHHHHHHHHHHHHHHHHTGG-GTTTEECCCCCTTEECC---CSSEEEEE---TTHHHHHHHHHHTTBCCB
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHhcc-CCCeEEeccCCCCCcee---eEEEEEEc---CCHHHHHHHHHHCCCccc
Confidence 54433322 44778888888899999888 542 11111011 1122 23333332 257889999999999988
Q ss_pred cCCC---------------------------CEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 228 PISN---------------------------NIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 228 ~~~~---------------------------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++.+ +.+|++++..+|++|++++++.|++++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 311 IHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp CSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 7631 78999999999999999999999999865
No 178
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.78 E-value=2.4e-18 Score=147.43 Aligned_cols=219 Identities=15% Similarity=0.043 Sum_probs=152.5
Q ss_pred CCCCceeecC------CCHHHHHH-HHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 16 HMPGYNIIPY------NDVDALEA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~------~d~~~l~~-~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
++ +++.++. .|+++|++ .+ ++++++|++++++|++|.+. + +++++||+++|+||+|+.+..
T Consensus 113 ~g-~~~~v~~~~~~~~~d~~~l~~~~i--~~~~k~v~~~~~~nptG~~~-~--------~i~~~~~~~li~D~a~~~~~~ 180 (360)
T 1w23_A 113 LG-ETHIAASTKANSYQSIPDFSEFQL--NENDAYLHITSNNTIYGTQY-Q--------NFPEINHAPLIADMSSDILSR 180 (360)
T ss_dssp TS-EEEEEEECGGGTSCSCCCGGGCCC--CTTEEEEEEESEETTTTEEC-S--------SCCCCCSSCEEEECTTTTTSS
T ss_pred hC-CeEEeecccccCcCCccchHhhcc--CCCCCEEEEeCCCCCcceec-c--------cccccCCceEEEechhhcCCC
Confidence 45 6666663 36777877 77 45799999998899999874 3 223389999999999964421
Q ss_pred cCcccccccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCC-----------CCCC-CCCcHHHHHHHHHHHHH
Q psy6547 89 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGT-----------HGST-YGGNPLACKLAMTALDV 156 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~~a~~~~l~~ 156 (266)
......+ +.-+.++||.+++ .++||+++++++.+.+.... .... .+.+...+.++..+++.
T Consensus 181 ---~~~~~~~--di~~~s~sK~~~~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 253 (360)
T 1w23_A 181 ---PLKVNQF--GMIYAGAQKNLGP--SGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW 253 (360)
T ss_dssp ---CCCGGGC--SEEEEETTTTTSC--TTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH
T ss_pred ---CcCcccC--CEEEEEcccccCC--CCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH
Confidence 1122222 2333347799973 24899999998887765432 1111 24456666777778877
Q ss_pred Hhh----ccHHHHHHHHHHHHHHHhhcccccCCCcc--cE-EecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC
Q psy6547 157 ILE----ENMIENAYKMGEIFRSELSSPANKSKASF--KL-SSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI 229 (266)
Q Consensus 157 ~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 229 (266)
+.. +++.++++++++++.+.|++ ++. .+.. .. ...+. ++++.++. ..+..+++++|.++||.+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~-~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~~gi~~~~~ 326 (360)
T 1w23_A 254 IKDLGGAEAIAKQNEEKAKIIYDTIDE-SNG-FYVGHAEKGSRSLM---NVTFNLRN--EELNQQFLAKAKEQGFVGLNG 326 (360)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHT-TTT-SSEESSCGGGBCSS---EEEEECSS--HHHHHHHHHHHHHTTEESCBC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHH-ccC-cccccCCchhccCc---EEEEEcCC--CccHHHHHHHHHHCCeeeecC
Confidence 654 34678888899999999988 542 1111 01 12355 78888865 445778999999999999876
Q ss_pred C--CCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 230 S--NNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 230 ~--~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
. .+++|++++..++++++++++++|++++++
T Consensus 327 ~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 327 HRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 3 478999999888999999999999988754
No 179
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.78 E-value=7.1e-19 Score=154.02 Aligned_cols=225 Identities=15% Similarity=0.121 Sum_probs=148.9
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..++.+++.++.+|+++|++++ .+++++|++++++|++|.+. ++++|+++|+++|+++|+||+|+. |..+
T Consensus 142 ~~~g~~~~~v~~~d~~~l~~ai--~~~t~~v~le~p~NptG~~~----~l~~i~~la~~~g~~livDe~~~~----~~~~ 211 (414)
T 3ndn_A 142 PRWGVQTVFVDGDDLSQWERAL--SVPTQAVFFETPSNPMQSLV----DIAAVTELAHAAGAKVVLDNVFAT----PLLQ 211 (414)
T ss_dssp HHTTCEEEEECTTCHHHHHHHT--SSCCSEEEEESSCTTTCCCC----CHHHHHHHHHHTTCEEEEECTTTH----HHHC
T ss_pred HHcCcEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccc----cHHHHHHHHHHcCCEEEEECCCcc----cccC
Confidence 3478899999999999999999 44689999999999999886 799999999999999999999952 1111
Q ss_pred ccccCCCCcCeeeecccccC-CchhhhhheecHHhhh-ccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALSG-GLYPISAVLADDEVMG-TLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~~-g~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
....++.++.+.++||++++ |.+++|+++++++.+. .+...........++..+.++...++.+ +...++..++++
T Consensus 212 ~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l--~~r~~~~~~~a~ 289 (414)
T 3ndn_A 212 QGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETL--AIRVQHSNASAQ 289 (414)
T ss_dssp CCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGGH--HHHHHHHHHHHH
T ss_pred CchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 11234556666779999985 4257899999887665 3432111112234566655555554433 223455566777
Q ss_pred HHHHHhhccccc------CCCcc---------cEEecCccceeeEEEEeeCc---cchHHHHHHHHHHCCceeccC----
Q psy6547 172 IFRSELSSPANK------SKASF---------KLSSGGLKKSINTLILSVSA---ILEVYDVCIKMKDAGLVTKPI---- 229 (266)
Q Consensus 172 ~l~~~l~~~~~~------~~~~~---------~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~~---- 229 (266)
.+.+.|++ ... +.++. ..++.|. +++|.++... ..+..+|++.|...++.+..+
T Consensus 290 ~l~~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~---~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~s 365 (414)
T 3ndn_A 290 RIAEFLNG-HPSVRWVRYPYLPSHPQYDLAKRQMSGGGT---VVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKS 365 (414)
T ss_dssp HHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred HHHHHHhc-CCCEeEEECCCCCCCcCHHHHHHhCCCCce---EEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCc
Confidence 77777766 321 11111 0234678 9999997510 124677888877666554432
Q ss_pred -----------------------CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 230 -----------------------SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 230 -----------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
..+.+|+|++. |+.+.+++.|++++
T Consensus 366 l~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al 413 (414)
T 3ndn_A 366 LVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL 413 (414)
T ss_dssp EEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred eeeCccccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 24789999554 45566666666654
No 180
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.78 E-value=2e-18 Score=148.71 Aligned_cols=225 Identities=12% Similarity=0.110 Sum_probs=146.8
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.+++.++.+ |+++|++.+ .+++++|++++. +|.+. ++++|.++|++||+++|+||+|+.. ...
T Consensus 94 ~g~~~~~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~---tG~~~----~l~~i~~l~~~~~~~li~D~a~~~~-~~~ 163 (375)
T 2fnu_A 94 SGYTPVFAGIKNDGNIDELALEKLI--NERTKAIVSVDY---AGKSV----EVESVQKLCKKHSLSFLSDSSHALG-SEY 163 (375)
T ss_dssp TTCEEEECCBCTTSSBCGGGSGGGC--CTTEEEEEEECG---GGCCC----CHHHHHHHHHHHTCEEEEECTTCTT-CEE
T ss_pred CCCEEEEeccCCCCCCCHHHHHhhc--CcCceEEEEeCC---cCCcc----CHHHHHHHHHHcCCEEEEECccccC-CeE
Confidence 45566777653 788898888 346887665544 66664 6899999999999999999999632 211
Q ss_pred cccccccCCCCcCeeeec--ccccCCchhhhhhee-c-HHhhhccCCCC----------------CCCCCCCcHHHHHHH
Q psy6547 91 KLLAIHYEDVRPDIVILG--KALSGGLYPISAVLA-D-DEVMGTLVPGT----------------HGSTYGGNPLACKLA 150 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~s--K~~~~g~~~~g~~~~-~-~~~~~~~~~~~----------------~~~~~~~~~~~~~a~ 150 (266)
.......++ +.++.++| |++++| +|+++. + +++.+.+.... ...++..+++.++++
T Consensus 164 ~~~~~~~~~-~i~~~s~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 239 (375)
T 2fnu_A 164 QNKKVGGFA-LASVFSFHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALG 239 (375)
T ss_dssp TTEETTSSS-SEEEEECCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHH
T ss_pred CCeeccccC-CeEEEeCCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHH
Confidence 110111122 34555688 999765 677666 3 55654443211 112234566665555
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcc--cEEecCccceeeEEEEeeCccc-hHHHHHHHHHHCCcee
Q psy6547 151 MTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASF--KLSSGGLKKSINTLILSVSAIL-EVYDVCIKMKDAGLVT 226 (266)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~~ 226 (266)
...++.+ ++..++.+++++++.+.|++ +.. ..... .....+. ++++.++.. +. +..++.+.|.++||.+
T Consensus 240 ~~~~~~~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~l~~~L~~~gi~v 312 (375)
T 2fnu_A 240 LSQLKKA--PFLMQKREEAALTYDRIFKD-NPYFTPLHPLLKDKSSNH---LYPILMHQK-FFTCKKLILESLHKRGILA 312 (375)
T ss_dssp HHHHTTH--HHHHHHHHHHHHHHHHHHTT-CSSEEESGGGCSSCCCCS---CEEEEECGG-GGGGHHHHHHHHHHTTEEC
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCCCcceE---EEEEEeCcc-ccchHHHHHHHHHHCCCCc
Confidence 5444322 35678888899999999988 532 11111 0012234 557777541 23 6788999999999998
Q ss_pred ccCC-------------------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 227 KPIS-------------------------NNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 227 ~~~~-------------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+... .+++|++++..+|++++++++++|+++++++
T Consensus 313 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 313 QVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp BCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 8310 1679999999999999999999999998764
No 181
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.77 E-value=2.1e-18 Score=149.47 Aligned_cols=226 Identities=15% Similarity=0.116 Sum_probs=149.6
Q ss_pred CCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-cC
Q psy6547 15 PHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LG 87 (266)
Q Consensus 15 ~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~-~~ 87 (266)
..+.+++.++.+ |+++|++++ .+++++|+ ++|++|.+. ++++|.++|++||+++|+||+|+. ..
T Consensus 97 ~~g~~~~~v~~~~~~~~~d~~~l~~~i--~~~~~~v~---~~n~tG~~~----~l~~i~~la~~~~~~li~D~a~~~g~~ 167 (388)
T 1b9h_A 97 RLGAVTVPVDVDAATYNLDPEAVAAAV--TPRTKVIM---PVHMAGLMA----DMDALAKISADTGVPLLQDAAHAHGAR 167 (388)
T ss_dssp HTTCEEEEECBCTTTCCBCHHHHHHHC--CTTEEEEC---CBCGGGCCC----CHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred HcCCEEEEEecCCCcCCCCHHHHHHhc--CcCceEEE---EeCCccCcC----CHHHHHHHHHHcCCEEEEecchhcCCc
Confidence 345567777642 799999999 44688877 445567765 899999999999999999999963 22
Q ss_pred CcCcccccccCCCCcCeeeec--ccccCCchhhhhheecHH-h--hhccC---CC------------CCCCCCCCcHHHH
Q psy6547 88 RTGKLLAIHYEDVRPDIVILG--KALSGGLYPISAVLADDE-V--MGTLV---PG------------THGSTYGGNPLAC 147 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~s--K~~~~g~~~~g~~~~~~~-~--~~~~~---~~------------~~~~~~~~~~~~~ 147 (266)
..|. ....++ +.++.+|| |+++|| ++|+++++++ + .+.+. .. ..+.++..+++.+
T Consensus 168 ~~~~--~~~~~~-~i~~~S~s~~K~l~g~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (388)
T 1b9h_A 168 WQGK--RVGELD-SIATFSFQNGKLMTAG--EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSA 242 (388)
T ss_dssp ETTE--EGGGSS-SCEEEECCTTSSSCSS--SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHH
T ss_pred cCCe--eccccc-ceEEEEccCCCcccCC--CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHH
Confidence 2222 122233 45566677 666554 6899988765 5 44431 11 0012233566666
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCccc---EEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 148 KLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFK---LSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 148 ~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
+++...++.++ +..++++++++++.+.|++ +.. ...... .+..+. ++++.++...+.+..++.+.|.++|
T Consensus 243 a~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g 316 (388)
T 1b9h_A 243 SVLRAQLARLD--EQIAVRDERWTLLSRLLGA-IDGVVPQGGDVRADRNSHY---MAMFRIPGLTEERRNALVDRLVEAG 316 (388)
T ss_dssp HHHHHHHTTHH--HHHHHHHHHHHHHHHHHHT-STTCEECCCCTTCCBCCCS---EEEEECTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHhcc-CCCccccCCCcCCCccceE---EEEEEeCCcCcccHHHHHHHHHHCC
Confidence 55555554432 3667778888999999887 532 111100 012356 8888886511236788999999999
Q ss_pred ceeccCCC---------------------------------CEEEEeccCCC-CHHHHHHHHHHHHHHHHH
Q psy6547 224 LVTKPISN---------------------------------NIIRLSPALNI-TEQELREGLDIIINTINT 260 (266)
Q Consensus 224 i~~~~~~~---------------------------------~~iR~~~~~~~-t~~~i~~~~~~l~~~~~~ 260 (266)
|.++++.. +.+|++++..+ |++|++++++.|.+++++
T Consensus 317 I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 317 LPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp CCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99875311 25999999889 999999999999998764
No 182
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=5.4e-18 Score=148.34 Aligned_cols=218 Identities=16% Similarity=0.130 Sum_probs=140.9
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc-cCcCCcCcccccccCCCCcCee
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKLLAIHYEDVRPDIV 105 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~-~~~~~~g~~~~~~~~~~~~d~~ 105 (266)
|+++|++++++. ++++|+++++++ |.. .++++|+++|++||+++|+||+| .++...+..+... ...+..+.
T Consensus 160 d~~~l~~~i~~~-~~~~v~~~~~~~--~~~----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~-~~~di~~~ 231 (425)
T 3ecd_A 160 DYDQVEALAQQH-KPSLIIAGFSAY--PRK----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV-EHAHVVTS 231 (425)
T ss_dssp CHHHHHHHHHHH-CCSEEEEECSCC--CSC----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-GTCSEEEE
T ss_pred CHHHHHHHHhhc-CCcEEEEccccC--CCc----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCch-hcCcEEEe
Confidence 899999999543 468888875333 233 37899999999999999999996 4332233322111 11233334
Q ss_pred eecccccCCchhhhhheec-HHhhhccCCCCCC-CCCCCcHHHHHHHHHHHHHHh-h--ccHHHHHHHHHHHHHHHhhcc
Q psy6547 106 ILGKALSGGLYPISAVLAD-DEVMGTLVPGTHG-STYGGNPLACKLAMTALDVIL-E--ENMIENAYKMGEIFRSELSSP 180 (266)
Q Consensus 106 ~~sK~~~~g~~~~g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~l~~~ 180 (266)
++||++ +| .++||++++ +.+.+.+...... ...+++...++++..++.... . +++.++++++++++++.|.+
T Consensus 232 s~sK~l-~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 308 (425)
T 3ecd_A 232 TTHKTL-RG-PRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA- 308 (425)
T ss_dssp ESSGGG-CC-CSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCccc-CC-CCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-
Confidence 577999 55 678999987 4555555432121 122334444444444444332 2 35778888899999999887
Q ss_pred cccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec----cC------CCCEEEEecc----CCCCHHH
Q psy6547 181 ANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK----PI------SNNIIRLSPA----LNITEQE 246 (266)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~------~~~~iR~~~~----~~~t~~~ 246 (266)
.+..... ..+.+. ++++.++.. +.+...+.+.|.++||.+. |+ ..+.+|++++ ...++++
T Consensus 309 ~g~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~ 382 (425)
T 3ecd_A 309 GGVDLVT--GGTDNH---LLLVDLRPK-GLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAE 382 (425)
T ss_dssp TTCEEGG--GSCSSS---EEEEECGGG-TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHH
T ss_pred CCCeecc--CCCCce---EEEEEeCCC-CCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHH
Confidence 4422211 113455 888887641 3467788899999999998 43 2358999954 4456999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6547 247 LREGLDIIINTINTM 261 (266)
Q Consensus 247 i~~~~~~l~~~~~~~ 261 (266)
++++++.|++++++.
T Consensus 383 i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 383 FREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998775
No 183
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.77 E-value=6.3e-18 Score=150.05 Aligned_cols=224 Identities=16% Similarity=0.126 Sum_probs=144.4
Q ss_pred CHHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC---c-------CCcCcccc
Q psy6547 27 DVDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG---L-------GRTGKLLA 94 (266)
Q Consensus 27 d~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~---~-------~~~g~~~~ 94 (266)
|+++|+++++++ +++++|++++++|++|+.+++.+++++|+++|++||++||+||++.. + +..|....
T Consensus 168 d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~ 247 (467)
T 1ax4_A 168 DIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIK 247 (467)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHH
T ss_pred CHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchh
Confidence 899999999653 36999999999999855669999999999999999999999998642 1 11221110
Q ss_pred -cc-cCCCCcCee--eecccccCCchhh-hhheec-H-HhhhccCCC----CCCCCCCCcHHH-HHHHHHHHHHHhhccH
Q psy6547 95 -IH-YEDVRPDIV--ILGKALSGGLYPI-SAVLAD-D-EVMGTLVPG----THGSTYGGNPLA-CKLAMTALDVILEENM 162 (266)
Q Consensus 95 -~~-~~~~~~d~~--~~sK~~~~g~~~~-g~~~~~-~-~~~~~~~~~----~~~~~~~~~~~~-~~a~~~~l~~~~~~~~ 162 (266)
+. .....+|++ ++||+++ .++ |+++.+ + ++++.+... ....++.+.+.. +.++..+++....++.
T Consensus 248 ~~~~~~~~~~d~~~~s~sK~~g---~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 324 (467)
T 1ax4_A 248 EVIFDMYKYADALTMSAKKDPL---LNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEY 324 (467)
T ss_dssp HHHHHHGGGCSEEEEETTSTTC---CSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHH
T ss_pred hhhhhhccccceEEEeccccCC---CCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhH
Confidence 00 000113444 4778775 444 456566 5 666544321 111233333332 2333335554333335
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEE-------EeeCccchHHHHHHHH-HHCCceecc-C----
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLI-------LSVSAILEVYDVCIKM-KDAGLVTKP-I---- 229 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~l-~~~gi~~~~-~---- 229 (266)
.++..++++++.+.|++ .+.... .+..|. ++|+. ++. .+.+..+++++| .++||.+.+ +
T Consensus 325 ~~~~~~~~~~l~~~L~~-~~~~~~---~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~v~~~g~~~~ 396 (467)
T 1ax4_A 325 LHYRIGQVKYLGDRLRE-AGIPIQ---YPTGGH---AVFVDCKKLVPQIPG-DQFPAQAVINALYLESGVRAVEIGSFLL 396 (467)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCBC---SSCCSS---EEEEESTTTCTTSCG-GGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CCCCcc---cCCCce---EEEEehhhhcccccc-CCCCHHHHHHHHHHhcCceeeecCcccc
Confidence 55556777888888876 332221 123456 77877 322 134578899999 899999987 2
Q ss_pred ------C------CCEEEEecc-CCCCHHHHHHHHHHHHHHHHHH
Q psy6547 230 ------S------NNIIRLSPA-LNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ------~------~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
+ .+++|++++ ..+|++++++++++|++++++.
T Consensus 397 ~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 397 GRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 1 279999988 4589999999999999988764
No 184
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.77 E-value=2.3e-18 Score=149.42 Aligned_cols=224 Identities=13% Similarity=0.165 Sum_probs=148.7
Q ss_pred cCCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-
Q psy6547 13 FGPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG- 85 (266)
Q Consensus 13 ~~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~- 85 (266)
+...+.+++.++.+ |+++|++.+ .+++++|+++ +++|... ++++|.++|++||+++|+||+|+.
T Consensus 113 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~v~~~---n~tG~~~----~~~~i~~l~~~~~~~li~D~a~~~g 183 (391)
T 3dr4_A 113 VTYCGATPVLVDNDPRTFNLDAAKLEALI--TPRTKAIMPV---HLYGQIC----DMDPILEVARRHNLLVIEDAAEAVG 183 (391)
T ss_dssp HHHTTCEEEEECBCTTTCSBCGGGSGGGC--CTTEEEECCB---CGGGCCC----CHHHHHHHHHHTTCEEEEECTTCTT
T ss_pred HHHCCCEEEEEecCccccCcCHHHHHHhc--CCCceEEEEE---CCCCChh----hHHHHHHHHHHcCCEEEEECccccc
Confidence 34456677777765 789999888 4578888854 3566654 799999999999999999999952
Q ss_pred cCCcCcccccccCCCCcCeeeec----ccccCCchhhhhheecH-HhhhccCCC--------------CCCCCCCCcHHH
Q psy6547 86 LGRTGKLLAIHYEDVRPDIVILG----KALSGGLYPISAVLADD-EVMGTLVPG--------------THGSTYGGNPLA 146 (266)
Q Consensus 86 ~~~~g~~~~~~~~~~~~d~~~~s----K~~~~g~~~~g~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~ 146 (266)
....+. ..+..+|+.++| |++++| +.|+++.+. .+.+.+... .....+..+++.
T Consensus 184 ~~~~~~-----~~~~~~di~~~S~s~~K~l~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~ 256 (391)
T 3dr4_A 184 ATYRGK-----KSGSLGDCATFSFFGNAIITTG--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQ 256 (391)
T ss_dssp CEETTE-----ETTSSSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHH
T ss_pred ceECCe-----eecccCCEEEEECCCCCcCCcC--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHH
Confidence 211111 122234666666 999765 477777654 454333211 112234556666
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCc----ccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 147 CKLAMTALDVILEENMIENAYKMGEIFRSELSSPANKSKAS----FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 147 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
++++...++.+ +++.++.+++.+++++.|++ ++..... ......+. ++++.+++..+.+..++.+.|.++
T Consensus 257 aa~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~~L~~~ 330 (391)
T 3dr4_A 257 AAIGLAQLERV--DEHLAARERVVGWYEQKLAR-LGNRVTKPHVALTGRHVFW---MYTVRLGEGLSTTRDQVIKDLDAL 330 (391)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHHHHHHHGG-GTTSEECCCCCTTSCCCCS---SEEEEECSSCSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhc-CCccccCcCCCCCCcceeE---EEEEEECCccchhHHHHHHHHHHC
Confidence 55555444332 45778888899999999988 4321110 00112233 467766542245688999999999
Q ss_pred CceeccCC------------------------CCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 223 GLVTKPIS------------------------NNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 223 gi~~~~~~------------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
||.++++. ...+|++++..+|++|++++++.|++++
T Consensus 331 GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 331 GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 99988652 3579999999999999999999998753
No 185
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.77 E-value=7.1e-19 Score=153.08 Aligned_cols=227 Identities=11% Similarity=0.034 Sum_probs=150.7
Q ss_pred ccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc----CCEEEEeccccCcC
Q psy6547 12 EFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY----NVLFIADEVQTGLG 87 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~----g~~li~De~~~~~~ 87 (266)
.+...+.+++.++.+| ++|++++ .+++++|++++++|++|.+. ++++|.++|+++ |+++|+||+|+.+.
T Consensus 113 ~~~~~G~~v~~v~~~d-~~l~~~i--~~~t~lv~~~~~~nptG~~~----~l~~i~~la~~~~~~~~~~livD~a~~~~~ 185 (393)
T 1n8p_A 113 VANAHGVETSFTNDLL-NDLPQLI--KENTKLVWIETPTNPTLKVT----DIQKVADLIKKHAAGQDVILVVDNTFLSPY 185 (393)
T ss_dssp TSTTTCSCCEEESSHH-HHHHHHS--CSSEEEEEECSSCTTTCCCC----CHHHHHHHHHHHTTTTTCEEEEECTTTHHH
T ss_pred HHHHcCcEEEEeCCCh-HHHHHhc--ccCceEEEEECCCCCcceec----CHHHHHHHHHHhCCCCCCEEEEeCCccccc
Confidence 3466788999999988 9999999 45799999999999999986 699999999999 99999999996542
Q ss_pred CcCcccccccCCCCcCeeeeccccc-CCchhh-hhheec-HHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHH
Q psy6547 88 RTGKLLAIHYEDVRPDIVILGKALS-GGLYPI-SAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIE 164 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~sK~~~-~g~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 164 (266)
. ...+ .++.+..+.+++|.++ +| +|+ |+++++ +++.+.+.........+.++..+.++..+++.+. ...+
T Consensus 186 ~-~~~~---~~~~di~~~S~sK~~g~~G-~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~ 258 (393)
T 1n8p_A 186 I-SNPL---NFGADIVVHSATKYINGHS-DVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLH--LRVR 258 (393)
T ss_dssp H-CCGG---GGTCSEEEEETTTTTTCSS-CCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH--HHHH
T ss_pred c-CCHH---HcCCeEEEEECcccccCCC-CceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHH--HHHH
Confidence 2 2221 2344444446999999 46 788 888884 7777766533221122345666666655555332 2334
Q ss_pred HHHHHHHHHHHHhhccccc-------CCCccc---------EEe-c-CccceeeEEEEeeCccchHHHHHHHHHHCCcee
Q psy6547 165 NAYKMGEIFRSELSSPANK-------SKASFK---------LSS-G-GLKKSINTLILSVSAILEVYDVCIKMKDAGLVT 226 (266)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~-------~~~~~~---------~~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 226 (266)
+..++.+.+.+.|++ ... +.+... .++ . |. +++|.++.. ..+...+...|...++.+
T Consensus 259 ~~~~~~~~l~~~L~~-~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~---i~~~~l~~~-~~~~~~~l~~l~~~~~~~ 333 (393)
T 1n8p_A 259 QAALSANKIAEFLAA-DKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG---MISFRIKGG-AEAASKFASSTRLFTLAE 333 (393)
T ss_dssp HHHHHHHHHHHHHTS-CTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS---EEEEEESSC-HHHHHHHHHHCSSSEECS
T ss_pred HHHHHHHHHHHHHHh-CCCCceEEECCCCCCCccHHHHHhhCCCCCCcc---EEEEEeCCc-HHHHHHHHhhCCcceECC
Confidence 445566666666665 211 111100 012 3 66 899998741 235666666665434332
Q ss_pred c----------c---C--------------CCCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 227 K----------P---I--------------SNNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 227 ~----------~---~--------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
. | . ..+.+|+|++..+++++++.+.+.|+++
T Consensus 334 s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 334 SLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp CCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1 1 1 1478999999999999999888888764
No 186
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.77 E-value=5.4e-18 Score=150.44 Aligned_cols=226 Identities=14% Similarity=0.110 Sum_probs=143.5
Q ss_pred CHHHHHHHHhcC--CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----------cCCcCccc-
Q psy6547 27 DVDALEAKLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG----------LGRTGKLL- 93 (266)
Q Consensus 27 d~~~l~~~l~~~--~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~----------~~~~g~~~- 93 (266)
|+++|+++++++ +++++|++++++|++|+.+++.+++++|+++|++||++||+|+++.. .+..|...
T Consensus 168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~ 247 (467)
T 2oqx_A 168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE 247 (467)
T ss_dssp CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH
T ss_pred CHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH
Confidence 899999999642 36899999999888755568999999999999999999999966532 11222211
Q ss_pred ccc---cCCCCcCeeeecccccCCchhhhhheecHH----hhhccCCC----CCCCCCCC-cHHHHHHHHHHHHHHhhcc
Q psy6547 94 AIH---YEDVRPDIVILGKALSGGLYPISAVLADDE----VMGTLVPG----THGSTYGG-NPLACKLAMTALDVILEEN 161 (266)
Q Consensus 94 ~~~---~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~----~~~~~~~~----~~~~~~~~-~~~~~~a~~~~l~~~~~~~ 161 (266)
.+. ....+..+.++||+++.+ . .|+++++++ .++.+... ....+++. +..++++...+++....++
T Consensus 248 ~~~~~~~~~~d~~~~s~sK~~g~~-~-Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~ 325 (467)
T 2oqx_A 248 QITRETYKYADMLAMSAKKDAMVP-M-GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLD 325 (467)
T ss_dssp HHHHHHGGGCSEEEEESSSTTCCS-S-CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHhhhhhccCCeEEEecccccCCC-C-ceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHH
Confidence 110 011222345688998633 1 356666655 33332211 11112222 2222222222223222224
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEee----Cc--cchHHHHHHHH-HHCCceeccCC----
Q psy6547 162 MIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSV----SA--ILEVYDVCIKM-KDAGLVTKPIS---- 230 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~--~~~~~~~~~~l-~~~gi~~~~~~---- 230 (266)
..++..++++++.+.|++ ++ +.. .+..+. ++++.+.. .+ ..+..+++++| .++||.+.+++
T Consensus 326 ~~~~~~~~~~~l~~~L~~-~~---~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~ 397 (467)
T 2oqx_A 326 WLAYRIAQVQYLVDGLEE-IG---VVC-QQAGGH---AAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLL 397 (467)
T ss_dssp HHHHHHHHHHHHHHHHHH-TT---CCE-EEECSS---CEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-CC---Cee-ecCCce---EEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccc
Confidence 566677888899999988 42 332 234466 78887742 01 11256679999 89999998732
Q ss_pred -------------CCEEEEeccCC-CCHHHHHHHHHHHHHHHHHHh
Q psy6547 231 -------------NNIIRLSPALN-ITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 231 -------------~~~iR~~~~~~-~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.+++|++++.. ++++++++++++|++++++..
T Consensus 398 ~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 398 GRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp CBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 27999999988 999999999999999987643
No 187
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=6.5e-18 Score=145.72 Aligned_cols=221 Identities=14% Similarity=0.122 Sum_probs=146.9
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
.+.+++.++.+ |+++|++++ .+++++|+ +++++|... ++++|.++|++||+++|+||+|+..
T Consensus 96 ~g~~~~~~~~~~~~~~~d~~~l~~~l--~~~~~~v~---~~n~~G~~~----~l~~i~~l~~~~~~~li~D~a~~~g--- 163 (373)
T 3frk_A 96 TGAKPIFVEPDIRTYNIDPSLIESAI--TEKTKAII---AVHLYGQPA----DMDEIKRIAKKYNLKLIEDAAQAHG--- 163 (373)
T ss_dssp HSCEEEEECEETTTTEECGGGTGGGC--CTTEEEEE---EECCTTCCC----CHHHHHHHHHHHTCEEEEECTTCTT---
T ss_pred cCCEEEEEeccccccCcCHHHHHHhc--CCCCeEEE---EECCCcCcc----cHHHHHHHHHHcCCEEEEECCcccC---
Confidence 35667777765 889999998 44788888 344677765 8999999999999999999999522
Q ss_pred CcccccccCCCCcCeeeec----ccccC-CchhhhhheecH-HhhhccCCC------------CCCCCCCCcHHHHHHHH
Q psy6547 90 GKLLAIHYEDVRPDIVILG----KALSG-GLYPISAVLADD-EVMGTLVPG------------THGSTYGGNPLACKLAM 151 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~~~s----K~~~~-g~~~~g~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~a~~ 151 (266)
..+.....+...|++++| |++++ | . .|+++++. ++.+.+... ..+.++..+++.++++.
T Consensus 164 -~~~~~~~~~~~~d~~~~S~~~~K~l~~~g-~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~ 240 (373)
T 3frk_A 164 -SLYKGMKVGSLGDAAGFSFYPAKNLGSLG-D-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLR 240 (373)
T ss_dssp -CEETTEETTSSSSEEEEECCTTSSSCCSS-S-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHH
T ss_pred -CEECCEeccccccEEEEeCcCCCccCccc-e-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHH
Confidence 112223344446787776 99987 6 3 67777753 454433211 12234455776666665
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEE-ecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC
Q psy6547 152 TALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLS-SGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS 230 (266)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 230 (266)
..++.+ +++.++.+++.+++++.|++ ++. .+..... .... ++.+.+.. .+.+++.+.|.++||.+++..
T Consensus 241 ~~~~~~--~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~~---~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~ 310 (373)
T 3frk_A 241 VKLKYL--DKWNEERRKIAQKYIAGINN-PNV-IIPVEADYAKHV---WYTFVIRS---EKRDELQKYLNNNGIGTLIHY 310 (373)
T ss_dssp HHHHTH--HHHHHHHHHHHHHHHHHCCC-TTE-ECCCCCTTEECC---CSSEEEEE---SSHHHHHHHHHHTTBCCBCSC
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhcc-Cce-EeccCCCCCcee---eEEEEEEe---CCHHHHHHHHHHCCCCcccCc
Confidence 554433 44678888888889888887 441 1111000 1112 33333332 257889999999999988542
Q ss_pred C---------------------------CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 231 N---------------------------NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 231 ~---------------------------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
. +.+|++++..+|++|++++++.|+++..++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~ 368 (373)
T 3frk_A 311 PIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEH 368 (373)
T ss_dssp SSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC---
T ss_pred CCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 1 689999999999999999999999887664
No 188
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.77 E-value=7.7e-18 Score=150.86 Aligned_cols=230 Identities=10% Similarity=0.034 Sum_probs=151.2
Q ss_pred CceeecCC-----CHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 19 GYNIIPYN-----DVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 19 ~v~~~~~~-----d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+++.+|.+ |+++|++.++++ ..+.+|+++..++++|.+. ++++|+++|++||+++++|++|+++...
T Consensus 228 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~----~l~~I~~l~~~~~~~l~vD~a~~~~~~~ 303 (497)
T 2qma_A 228 AVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAID----DLDFIADMAVKHDMWMHVDGAYGGALIL 303 (497)
T ss_dssp GEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCC----CHHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence 68888876 899999999653 1244777777777788865 8999999999999999999999765433
Q ss_pred CcccccccCCC-CcCeee--ecccccCCchhhhhheecHH-hhhccCCCCCC----CCCCCcHHH----------HHHHH
Q psy6547 90 GKLLAIHYEDV-RPDIVI--LGKALSGGLYPISAVLADDE-VMGTLVPGTHG----STYGGNPLA----------CKLAM 151 (266)
Q Consensus 90 g~~~~~~~~~~-~~d~~~--~sK~~~~g~~~~g~~~~~~~-~~~~~~~~~~~----~~~~~~~~~----------~~a~~ 151 (266)
+. +.....++ .+|+++ ++|+++++ ++.|+++.+.+ .++.+.....+ .+..++... ..+..
T Consensus 304 ~~-~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~ 381 (497)
T 2qma_A 304 SS-HKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVF 381 (497)
T ss_dssp ST-TGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHH
T ss_pred Cc-chHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHH
Confidence 33 22223344 567776 48999988 78999887643 34444321000 000011111 11223
Q ss_pred HHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCcc---chHHHHHHHHHHCCc
Q psy6547 152 TALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAI---LEVYDVCIKMKDAGL 224 (266)
Q Consensus 152 ~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi 224 (266)
.+++.+.. +++.++..++++++.+.|++ +.. ..+. ...+. ++.|.+..... ....++.+.|.++|+
T Consensus 382 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~---~~~~~---~v~f~~~~~~~~~~~l~~~l~~~l~~~G~ 454 (497)
T 2qma_A 382 MTMQNVGPKALGDMYDHLLAQTLEVADMIRT-NDQFELLA---EPSLS---TVLFRATHETADLDELNKALRLEALTRGI 454 (497)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT-CTTEEECS---CCSSS---EEEEEECCSSSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEc---CCCce---EEEEEEcCCccCHHHHHHHHHHHHHhCCC
Confidence 34454433 34677788899999999987 432 1111 12344 78888764211 113567888889999
Q ss_pred eeccC----CCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 225 VTKPI----SNNIIRLSP-ALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 225 ~~~~~----~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.+.+. +.+++|+++ +..+|++++++++++|+++++++
T Consensus 455 ~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 455 AVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp CBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 88642 346899997 78899999999999999988764
No 189
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.76 E-value=3e-18 Score=148.94 Aligned_cols=219 Identities=14% Similarity=0.128 Sum_probs=143.7
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..++.+++.++.+|++++++.+ .+++++|++++++|++|.+. ++++|.++|++||+++|+||+|+.+. .+..+
T Consensus 120 ~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~----~l~~i~~~~~~~~~~livD~~~~~~~-~~~~~ 192 (389)
T 3acz_A 120 PRFGIEVDLIDTSDVEKVKAAW--KPNTKMVYLESPANPTCKVS----DIKGIAVVCHERGARLVVDATFTSPC-FLKPL 192 (389)
T ss_dssp HHTTCEEEEECTTCHHHHHHTC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHHTCEEEEECTTTCTT-TCCGG
T ss_pred HHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCeec----CHHHHHHHHHHcCCEEEEECCCcccc-ccCcc
Confidence 3467889999999999999999 45789999999999999886 69999999999999999999996542 22222
Q ss_pred ccccCCCCcCee--eecccccCCchhh-hhheecH-HhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy6547 94 AIHYEDVRPDIV--ILGKALSGGLYPI-SAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKM 169 (266)
Q Consensus 94 ~~~~~~~~~d~~--~~sK~~~~g~~~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 169 (266)
+..+|++ +++|+++++..|+ |++++++ ++.+.+.........+.++..+.++...++.+. ...++..++
T Consensus 193 -----~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~--~r~~~~~~~ 265 (389)
T 3acz_A 193 -----ELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTLP--IRMQIHMEN 265 (389)
T ss_dssp -----GTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHH
T ss_pred -----ccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHHH--HHHHHHHHH
Confidence 1345555 6999999432787 9999988 887766543221233457777776666665331 123344445
Q ss_pred HHHHHHHhhcccc------cCCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-----
Q psy6547 170 GEIFRSELSSPAN------KSKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----- 229 (266)
Q Consensus 170 ~~~l~~~l~~~~~------~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----- 229 (266)
...+.+.+++ .+ .+.+.. ..++.|. ++.|.+.. .+++.+.|.+.|+.+.+.
T Consensus 266 ~~~l~~~l~~-~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~---~~~~~l~~-----~~~~~~~l~~~~i~~~~~s~G~~ 336 (389)
T 3acz_A 266 GLKVAKFLEQ-HEKIVKVNHPGLESFPGHDIAKKQMTGYGS---TFLFEMKS-----FEAAKKLMEHLKVCTLAVSLGCV 336 (389)
T ss_dssp HHHHHHHHHH-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEESS-----HHHHHHHHTTCSSSEEBSCCCCS
T ss_pred HHHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCe---EEEEEECC-----HHHHHHHHHhCCCcEECcCCCCc
Confidence 5555555554 21 111111 0123466 88888753 345566666778776541
Q ss_pred -------------------------CCCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 230 -------------------------SNNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 230 -------------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
..+.+|++++... .+++++.|.++++
T Consensus 337 ~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~----~~~li~~l~~al~ 387 (389)
T 3acz_A 337 DTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIEN----VDDIIADLKQALE 387 (389)
T ss_dssp SCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSC----HHHHHHHHHHHHT
T ss_pred ccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCC----HHHHHHHHHHHHh
Confidence 1479999977664 4555555555543
No 190
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.76 E-value=6.6e-18 Score=145.03 Aligned_cols=202 Identities=11% Similarity=0.013 Sum_probs=143.1
Q ss_pred CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeeecccccCCchh
Q psy6547 38 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYP 117 (266)
Q Consensus 38 ~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~~ 117 (266)
++++++|++++++|++|.+.. ++++| +|+++++|++|+.+ . ....+.. .+.-+.++||++++ ..
T Consensus 140 ~~~t~~v~~~~~~n~tG~~~~---~l~~i------~~~~vivD~a~~~~-~--~~~~~~~--~d~~~~s~~K~~g~--~G 203 (362)
T 2c0r_A 140 QDNAAYLHLTSNETIEGAQFK---AFPDT------GSVPLIGDMSSDIL-S--RPFDLNQ--FGLVYAGAQKNLGP--SG 203 (362)
T ss_dssp CTTEEEEEEESEETTTTEECS---SCCCC------TTSCEEEECTTTTT-S--SCCCGGG--CSEEEEETTTTTCC--SS
T ss_pred CCCcCEEEEeCCcCccceecc---ccccc------CCCEEEEEChhhcc-C--CccchhH--CcEEEEeccccccC--cC
Confidence 457999999888999998622 35554 89999999999532 1 1112222 23334458999972 23
Q ss_pred hhhheecHHhhhccCCC------------CCCCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHhhccc
Q psy6547 118 ISAVLADDEVMGTLVPG------------THGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMGEIFRSELSSPA 181 (266)
Q Consensus 118 ~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~~~ 181 (266)
+||+++++++.+.+... .....++.+...+.++.++++.+.. +...++++++++++.+.|++ +
T Consensus 204 ~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 282 (362)
T 2c0r_A 204 VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ-S 282 (362)
T ss_dssp CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-S
T ss_pred cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-c
Confidence 79999998887776542 1123456777888888899987654 45778888899999999988 5
Q ss_pred c-c-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--CCEEEEeccCCCCHHHHHHHHHHHHHH
Q psy6547 182 N-K-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINT 257 (266)
Q Consensus 182 ~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~iR~~~~~~~t~~~i~~~~~~l~~~ 257 (266)
+ . ..........+. ++++.++. +.+..+++++|.++||.+.++. .+++|++++..+++++++++++.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 283 GGFYRGCVDVDSRSDM---NITFRLAS--EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp TTSSEESSCGGGBCSS---EEEEECSC--HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCccccCCChHHcCCc---EEEEEcCC--cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4 1 111110112334 67787765 4568899999999999887653 467999998888999999999999998
Q ss_pred HHHH
Q psy6547 258 INTM 261 (266)
Q Consensus 258 ~~~~ 261 (266)
++++
T Consensus 358 ~~~~ 361 (362)
T 2c0r_A 358 KRSR 361 (362)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8654
No 191
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.76 E-value=1.9e-18 Score=152.94 Aligned_cols=225 Identities=17% Similarity=0.098 Sum_probs=141.6
Q ss_pred CHHHHHHHHhcC--CCEEEEEEccccC-CCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----------cCCcCccc
Q psy6547 27 DVDALEAKLKSN--PNICAFMVEPIQG-EAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG----------LGRTGKLL 93 (266)
Q Consensus 27 d~~~l~~~l~~~--~~~~~i~~~~~~~-~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~----------~~~~g~~~ 93 (266)
|+++|+++++++ +.+++|++++++| ++|. .++.+++++|+++|++||+++|+||+|+. +.+.|..+
T Consensus 159 d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~ 237 (456)
T 2ez2_A 159 DLKKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSI 237 (456)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCH
T ss_pred CHHHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcch
Confidence 899999999642 2368888886655 7785 48999999999999999999999999963 33334321
Q ss_pred c-c-ccCCCCcCeeeec-ccccCCchhhhhhee-cHHhhhccCCCC----CCCCC-CCcHHHHHH-HHHHHHHHhhccHH
Q psy6547 94 A-I-HYEDVRPDIVILG-KALSGGLYPISAVLA-DDEVMGTLVPGT----HGSTY-GGNPLACKL-AMTALDVILEENMI 163 (266)
Q Consensus 94 ~-~-~~~~~~~d~~~~s-K~~~~g~~~~g~~~~-~~~~~~~~~~~~----~~~~~-~~~~~~~~a-~~~~l~~~~~~~~~ 163 (266)
. + ...+..+|++++| |.+++. -++||+++ ++++.+.+.... ...++ +.++..+.+ +.+.++.++ +++.
T Consensus 238 ~~~~~~~~~~~d~~~~S~kk~~~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~ 315 (456)
T 2ez2_A 238 AEIVHEMFSYADGCTMSGKKDCLV-NIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYI 315 (456)
T ss_dssp HHHHHHHHTTCSEEEEETTTTTCC-SSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHH
T ss_pred hhhhhhhcccCCEEEEeCcccCCC-CceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHH
Confidence 1 0 0112235676653 444432 24788888 677766543211 01111 223333333 444343322 4567
Q ss_pred HHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeC-ccch-----HHHHHHHH-HHCCceecc-C------
Q psy6547 164 ENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVS-AILE-----VYDVCIKM-KDAGLVTKP-I------ 229 (266)
Q Consensus 164 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-----~~~~~~~l-~~~gi~~~~-~------ 229 (266)
++..++.+++++.|++ .+...+ .+..|. ++++.+..- .+.+ .+.++++| .++||.+.+ +
T Consensus 316 ~~~~~~~~~l~~~L~~-~g~~~~---~p~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~ 388 (456)
T 2ez2_A 316 EHRVKQVRYLGDKLKA-AGVPIV---EPVGGH---AVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGR 388 (456)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCBC---SSCCSS---EEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCB
T ss_pred HHHHHHHHHHHHHHhc-CCCccc---cCCCce---EEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeeccccccccc
Confidence 7777788888888887 432221 123466 778776320 0112 34447777 588997643 1
Q ss_pred ----------CCCEEEEeccCC-CCHHHHHHHHHHHHHHHHHH
Q psy6547 230 ----------SNNIIRLSPALN-ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 230 ----------~~~~iR~~~~~~-~t~~~i~~~~~~l~~~~~~~ 261 (266)
+.+++|++++.. ++++++++++++|++++++.
T Consensus 389 ~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 389 NNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp CTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 137899998876 89999999999999998764
No 192
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.76 E-value=5.4e-19 Score=152.84 Aligned_cols=231 Identities=11% Similarity=0.079 Sum_probs=141.8
Q ss_pred CCCCCceeecCCCHHHHHHHHhcCCCEEE-EEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 15 PHMPGYNIIPYNDVDALEAKLKSNPNICA-FMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 15 ~~~~~v~~~~~~d~~~l~~~l~~~~~~~~-i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..+.+++.+ .|+++|++. + +++++ |++++++|++|. +..++++|.++|++||+++|+||+|..+. .+...
T Consensus 120 ~~g~~~~~v--~d~~~l~~~-~--~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~~-~~~~~ 190 (374)
T 2aeu_A 120 IVNAKYFES--DKVGEILNK-I--DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGARV-RLLFN 190 (374)
T ss_dssp HTTCEEEEE--SCHHHHHTT-C--CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHHH-HHHTT
T ss_pred HcCcEEEEe--CCHHHHHhc-C--CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCccccc-ccccc
Confidence 346677777 689999887 3 46788 888888888873 45699999999999999999999995431 11110
Q ss_pred c--cccCCCCcCeeeecccccCCchhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 94 A--IHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 94 ~--~~~~~~~~d~~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
. ...++.+..+.++||+++ | +++||+++++++++.+.........+.+++.+.++.++++.+..+ ..++..++++
T Consensus 191 ~~~~~~~~~di~~~S~sK~l~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~ 267 (374)
T 2aeu_A 191 QPPALKLGADLVVTSTDKLME-G-PRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAK 267 (374)
T ss_dssp CCCHHHHTCSEEEEETTSSSS-S-CSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHH
T ss_pred cCCccccCCcEEEecCccccc-C-cceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHH
Confidence 0 111233333335999986 5 689999999988877764322233356888888888888765321 2233333333
Q ss_pred HH----HHHhhccccc----CCCcccEEecCccceeeEEE-EeeCccc---hHHHHHHHH-HHCCceeccC-----CCCE
Q psy6547 172 IF----RSELSSPANK----SKASFKLSSGGLKKSINTLI-LSVSAIL---EVYDVCIKM-KDAGLVTKPI-----SNNI 233 (266)
Q Consensus 172 ~l----~~~l~~~~~~----~~~~~~~~~~g~~~~~~~~~-~~~~~~~---~~~~~~~~l-~~~gi~~~~~-----~~~~ 233 (266)
.+ ++.|.+.+.. ..+.....+.|. ++++. ... .. +..+++.++ .++||.+.|+ ..++
T Consensus 268 ~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~---~~~~~~~~~--~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~ 342 (374)
T 2aeu_A 268 NFDLSKIEKLNKELKAIDDNINIVYERTPTGF---VIKRVYKDD--TINIKKLIEIGFNLLKNYGIITITVAGMPGASKS 342 (374)
T ss_dssp HCCCHHHHHHHHHHTTTCTTEEEEEEECSSEE---EEEEEESSH--HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCS
T ss_pred HHHHHHHHHHHHhhhhhhhccCcceeeCCceE---EEEeecccc--cccccchHHHHHHHHHhCCEEEecCCCCCCCCCe
Confidence 33 3443331211 111111223344 44443 211 11 123366555 5789999875 2358
Q ss_pred EEEeccC-CCCHHHHHHHHHHHHHHHHHHh
Q psy6547 234 IRLSPAL-NITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 234 iR~~~~~-~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
+|++++. ..++++++++.+.|+++++++.
T Consensus 343 lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 343 LRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp EEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999753 2233348888888888887764
No 193
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.76 E-value=2e-18 Score=150.89 Aligned_cols=217 Identities=16% Similarity=0.107 Sum_probs=141.4
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcCCcCcccccccCCCCcCe
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDI 104 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~~~g~~~~~~~~~~~~d~ 104 (266)
.|+++|+++++++ ++++|+++++++ |... ++++|+++|++||+++|+||+|+ ++...|..... . . .+|+
T Consensus 156 ~d~~~l~~~i~~~-~~~~v~~~~~~~--~~~~----~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~-~-~~di 225 (420)
T 3gbx_A 156 IDYDEMAKLAKEH-KPKMIIGGFSAY--SGVV----DWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP-V-P-HAHV 225 (420)
T ss_dssp CCHHHHHHHHHHH-CCSEEEECCTTC--CSCC----CHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS-T-T-TSSE
T ss_pred cCHHHHHHHHHhc-CCeEEEEecCcc--CCcc----CHHHHHHHHHHcCCEEEEECCcchhceecccCCcc-c-c-cCCE
Confidence 5899999999653 478888865433 2333 59999999999999999999983 33222322111 1 1 2667
Q ss_pred ee--ecccccCCchhhhhheecH---HhhhccCCCCCCCCC-CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q psy6547 105 VI--LGKALSGGLYPISAVLADD---EVMGTLVPGTHGSTY-GGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRS 175 (266)
Q Consensus 105 ~~--~sK~~~~g~~~~g~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~ 175 (266)
++ +||+++| .+.|++++++ ++.+.+.......+. +++...++++..++..... +++.+++.++++++++
T Consensus 226 ~~~s~sK~~~g--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (420)
T 3gbx_A 226 VTTTTHKTLAG--PRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE 303 (420)
T ss_dssp EEEESSGGGCS--CSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccCCCC--CCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Confidence 66 7799974 4578888886 666655432222222 2233334444444443322 3567888888899998
Q ss_pred HhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc----------CCCCEEEEeccCC----
Q psy6547 176 ELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP----------ISNNIIRLSPALN---- 241 (266)
Q Consensus 176 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~----------~~~~~iR~~~~~~---- 241 (266)
.|.+ .+...+. ....+. ++++.+... +.+...+.+.|.++||.+.+ .+.+.+|++++..
T Consensus 304 ~L~~-~g~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~ 376 (420)
T 3gbx_A 304 VFLN-RGYKVVS--GGTENH---LFLLDLVDK-NLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRG 376 (420)
T ss_dssp HHHH-TTCEEGG--GSCSSS---EEEEECGGG-TCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHh-cCCeecc--CCCCCe---EEEEEcCCC-CCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccC
Confidence 8887 4321111 112344 888887541 34677888889999999887 2345699997654
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~~ 261 (266)
.++++++++++.|++++++.
T Consensus 377 ~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 377 FKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CCHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhCc
Confidence 56899999999999988664
No 194
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.76 E-value=1.7e-18 Score=152.72 Aligned_cols=225 Identities=16% Similarity=0.103 Sum_probs=148.5
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCE-EEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNI-CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~-~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
+..++.+++.++.+|+++|+++++. ++ ++|++++++|++|.+. ++++|.++|++||+++|+||+|+.. ....
T Consensus 174 ~~~~G~~v~~v~~~d~~~l~~ai~~--~tv~lV~le~p~NptG~v~----dl~~I~~la~~~g~~livD~a~~~~-~~~~ 246 (445)
T 1qgn_A 174 LPKMGITATVIDPADVGALELALNQ--KKVNLFFTESPTNPFLRCV----DIELVSKLCHEKGALVCIDGTFATP-LNQK 246 (445)
T ss_dssp GGGGTCEEEEECSSCHHHHHHHHHH--SCEEEEEEESSCTTTCCCC----CHHHHHHHHHHTTCEEEEECTTTCT-TTCC
T ss_pred HHHcCCEEEEeCCCCHHHHHHHhcc--CCCCEEEEeCCCCCCCccc----CHHHHHHHHHHcCCEEEEECCCccc-ccCC
Confidence 3456788999999999999999954 46 9999999999999886 7999999999999999999999532 1111
Q ss_pred ccccccCCCCcCeee--ecccccCC-chhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVI--LGKALSGG-LYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYK 168 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~--~sK~~~~g-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 168 (266)
.....+|+++ ++|.++|+ ..++|++++++++++.+...........+++.+..+..+++.+. ...++..+
T Consensus 247 -----~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~ 319 (445)
T 1qgn_A 247 -----ALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLH--LRVQQQNS 319 (445)
T ss_dssp -----TTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHH--HHHHHHHH
T ss_pred -----ccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHHHH--HHHHHHHH
Confidence 1234466665 88999854 12689999998887766532211112245665555555554332 22344455
Q ss_pred HHHHHHHHhhccccc------CCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----
Q psy6547 169 MGEIFRSELSSPANK------SKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI---- 229 (266)
Q Consensus 169 ~~~~l~~~l~~~~~~------~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~---- 229 (266)
+.+.+.+.|++ .+. +.++. ..++.|. +++|.++.. ..+...+.+.|...++.++.+
T Consensus 320 ~a~~l~~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~---ivsf~l~~~-~~~~~~~l~~l~~~~i~~s~G~~~s 394 (445)
T 1qgn_A 320 TALRMAEILEA-HPKVRHVYYPGLQSHPEHHIAKKQMTGFGG---AVSFEVDGD-LLTTAKFVDALKIPYIAPSFGGCES 394 (445)
T ss_dssp HHHHHHHHHHT-CTTEEEEECTTSSSSTTHHHHHHHCSCCCS---EEEEEESSC-HHHHHHHHHHCSSSEECSCCCSSSC
T ss_pred HHHHHHHHHhc-CCCceEEECCCCCCCchHHHHHHhccCCCc---EEEEEECCC-HHHHHHHHHhCCCceEeccCCCCce
Confidence 56777777776 321 11110 0123566 999998751 123566776665334432211
Q ss_pred -----------------------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 230 -----------------------SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 230 -----------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
..+.+|+|++ .|+++.+++.|+++++.
T Consensus 395 l~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 395 IVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp EEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred eeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 1479999955 46799999999998864
No 195
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.76 E-value=1.5e-17 Score=147.46 Aligned_cols=222 Identities=11% Similarity=0.102 Sum_probs=147.4
Q ss_pred CCCCceeecC--------CCHHHHHHHH-hc--CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 16 HMPGYNIIPY--------NDVDALEAKL-KS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 16 ~~~~v~~~~~--------~d~~~l~~~l-~~--~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
.+.+++.++. .|+++|++++ +. .+++.+|++...++++|.+. ++++|.++|+++|+++++|++|.
T Consensus 196 ~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~----~l~~I~~la~~~g~~v~vD~A~~ 271 (456)
T 2z67_A 196 VGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSD----DIVEIAKICENYDIPHIINGAYA 271 (456)
T ss_dssp TTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCC----CHHHHHHHHHHHTCCEEEECTTT
T ss_pred cCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcC----CHHHHHHHHHHcCCcEEEECcch
Confidence 4556666654 3799999999 42 23677777666767788875 99999999999999999999996
Q ss_pred CcCCcCc-cccccc-CCCCcCeee--ecccccCCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q psy6547 85 GLGRTGK-LLAIHY-EDVRPDIVI--LGKALSGGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE 159 (266)
Q Consensus 85 ~~~~~g~-~~~~~~-~~~~~d~~~--~sK~~~~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 159 (266)
++. .|. ...... .+ .+|+++ ++|+++++ +++|++++ ++++.+.+.+...+... .++ ..++.+++..+..
T Consensus 272 ~~~-~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~~~~g~~~-~~~--~~~~~aal~~l~~ 345 (456)
T 2z67_A 272 IQN-NYYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISLSYPGRAS-ATP--VVNTLVSLLSMGS 345 (456)
T ss_dssp TTC-HHHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHTTSCSCBC-SHH--HHHHHHHHHHHHH
T ss_pred HHH-HHhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCcCCCCCCC-CCH--HHHHHHHHHHHHH
Confidence 552 121 111111 11 456555 68988888 88999999 56776666433222221 221 2233334443333
Q ss_pred ---ccHHHHHHHHHHHHHHHhhccc----ccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCc---eec--
Q psy6547 160 ---ENMIENAYKMGEIFRSELSSPA----NKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGL---VTK-- 227 (266)
Q Consensus 160 ---~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi---~~~-- 227 (266)
++..++..++++++.+.|++ + +...+. . . . +++|.+... + ...++.++|.++|+ -+.
T Consensus 346 ~~~~~~~~~~~~~~~~l~~~L~~-~~~~~g~~v~~--~--~-~---~v~~~~~~~-~-~~~~l~~~L~~~gi~~~rv~~~ 414 (456)
T 2z67_A 346 KNYLELVKNQKNSKKLLDELLND-LSKKTGGKFLD--V--E-S---PIASCISVN-S-DPVEIAAKLYNLRVTGPRGIKK 414 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHSSCCBCC--C--C-C---SSEEEEECS-S-CHHHHHHHHHHTTEESCEEECT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cccccCCEecC--C--C-C---eEEEEEecc-c-HHHHHHHHHHHcCCCcceEEee
Confidence 45678888999999999988 5 322221 1 1 3 677777321 1 25789999999986 232
Q ss_pred ----------cCCCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 228 ----------PISNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 228 ----------~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
....+++|++++..+|++++++++++|++++
T Consensus 415 ~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 415 TDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred cCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 2234799999999999999999999998754
No 196
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.75 E-value=6.2e-18 Score=149.53 Aligned_cols=219 Identities=14% Similarity=0.081 Sum_probs=141.3
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc-cCcCCcCcccccccCCCCcCe
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKLLAIHYEDVRPDI 104 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~-~~~~~~g~~~~~~~~~~~~d~ 104 (266)
.|+++|++++++. ++++++++...++++. ++++|+++|++||+++|+||+| .|+...|..+.. ..+.+..+
T Consensus 172 ~d~~~l~~~i~~~-~~~~i~~~~~~~~~~~------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~-~~~~di~~ 243 (447)
T 3h7f_A 172 IDMDAVRATALEF-RPKVIIAGWSAYPRVL------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP-VPHADVVS 243 (447)
T ss_dssp CCHHHHHHHHHHH-CCSEEEEECSSCCSCC------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS-TTTCSEEE
T ss_pred cCHHHHHHHHHhc-CCeEEEEcCCCCCCcc------CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC-CCCCcEEE
Confidence 4899999999543 4567777444333332 8899999999999999999997 443222322111 11233334
Q ss_pred eeecccccCCchhhhhheecHHhhhccCCCCCCCCCC-CcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcc
Q psy6547 105 VILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYG-GNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSP 180 (266)
Q Consensus 105 ~~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 180 (266)
.++||+++ | ++.|++++++++.+.+.......+++ ++...++++..++..... +++.+++.++++++.+.|++
T Consensus 244 ~s~sK~l~-G-~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~- 320 (447)
T 3h7f_A 244 TTVHKTLG-G-GRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMA- 320 (447)
T ss_dssp EESSGGGC-C-CSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTS-
T ss_pred ecCCcCCC-C-CCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 45899995 5 78899999988776665332222222 233334555555554332 34778888899999999987
Q ss_pred c-----ccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec----cC------CCCEEEEeccCC----
Q psy6547 181 A-----NKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK----PI------SNNIIRLSPALN---- 241 (266)
Q Consensus 181 ~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~------~~~~iR~~~~~~---- 241 (266)
. +...+.. ...+. ++++.+... +.+...+.+.|.++||.+. +. ..+.+|++++..
T Consensus 321 ~~~~~~g~~~~~~--~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~ 394 (447)
T 3h7f_A 321 PDVAKAGVSVVSG--GTDVH---LVLVDLRDS-PLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRG 394 (447)
T ss_dssp HHHHHTTCEEGGG--SCSSS---EEEEECTTS-SCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHT
T ss_pred ccccCCCeEEecC--CCCCC---EEEEEcCCC-CCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCC
Confidence 4 3211110 11234 777777532 3456677777888899988 33 347899987643
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINTM 261 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~~ 261 (266)
.++++++++++.|++++++.
T Consensus 395 ~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 395 FGDTEFTEVADIIATALATG 414 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHSG
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 68999999999999998764
No 197
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.75 E-value=3.6e-17 Score=146.76 Aligned_cols=233 Identities=13% Similarity=0.052 Sum_probs=151.3
Q ss_pred CceeecCC-----CHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 19 GYNIIPYN-----DVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 19 ~v~~~~~~-----d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+++.+|.+ |+++|++.++++ .++++|+++..++++|.+. ++++|+++|++||+++++|++|+++...
T Consensus 215 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~----~l~~I~~la~~~g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 215 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD----PIQEIADICEKYNLWLHVDAAWGGGLLM 290 (504)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC----CHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC----CHHHHHHHHHHcCCEEEEehhhhhHHHh
Confidence 78888875 899999999652 2588899988888889875 8999999999999999999999765322
Q ss_pred CcccccccCCC-CcCeeee--cccccCCchhhhhheecH-Hhhhc----cCCCCCC-CC----------------CCCcH
Q psy6547 90 GKLLAIHYEDV-RPDIVIL--GKALSGGLYPISAVLADD-EVMGT----LVPGTHG-ST----------------YGGNP 144 (266)
Q Consensus 90 g~~~~~~~~~~-~~d~~~~--sK~~~~g~~~~g~~~~~~-~~~~~----~~~~~~~-~~----------------~~~~~ 144 (266)
...+.....++ .+|++++ +|+++++ ++.|+++.++ ++++. ...+... .. .....
T Consensus 291 ~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~ 369 (504)
T 2okj_A 291 SRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDI 369 (504)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCH
T ss_pred CHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccH
Confidence 22121222333 5677775 5999977 7899998875 35442 1122111 00 01134
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc--c------------
Q psy6547 145 LACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA--I------------ 209 (266)
Q Consensus 145 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~--~------------ 209 (266)
+.+.+++.++..-.-+++.++..++++++.+.|++ ... ..+.. ...... ++.|...... +
T Consensus 370 l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~-~~p~~~---~v~f~~~~~~~~~~~~~~~~~~~~~ 444 (504)
T 2okj_A 370 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFN-GEPEHT---NVCFWYIPQSLRGVPDSPQRREKLH 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTEEESSS-SCCSSS---CEEEEECCGGGSSCCCCHHHHHHHT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEec-CCCCeE---EEEEEEeCccccccccchhhHHHHH
Confidence 55555555553222244677888899999999987 432 22211 012233 4555542210 0
Q ss_pred chHHHHHHHHHHCCce-ecc--C-C-CCEEEEecc-CCCCHHHHHHHHHHHHHHHHHH
Q psy6547 210 LEVYDVCIKMKDAGLV-TKP--I-S-NNIIRLSPA-LNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 210 ~~~~~~~~~l~~~gi~-~~~--~-~-~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
....++.+.|.++|++ +.+ . + .+++|+++. ..+|++++++++++|+++++++
T Consensus 445 ~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 445 KVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp THHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0146788999999964 332 1 2 258999985 7889999999999999987664
No 198
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.75 E-value=1.5e-16 Score=140.84 Aligned_cols=234 Identities=11% Similarity=0.051 Sum_probs=152.3
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc------CCEEEEeccc
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY------NVLFIADEVQ 83 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~------g~~li~De~~ 83 (266)
++.+++.++.+ |+++|++.+ .+++++|+++.+++++|.+. ++++|.++|+++ |+++++|++|
T Consensus 159 ~G~~v~~v~~~~~~~~~d~~~l~~~i--~~~t~~v~~~~~~n~tG~~~----~l~~I~~ia~~~~~~~~~~~~l~vD~a~ 232 (452)
T 2dgk_A 159 WDVELREIPMRPGQLFMDPKRMIEAC--DENTIGVVPTFGVTYTGNYE----FPQPLHDALDKFQADTGIDIDMHIDAAS 232 (452)
T ss_dssp TTCEEEECCCBTTBCSCCHHHHHHHC--CTTEEEEECBBSCTTTCBBC----CHHHHHHHHHHHHHHHCCCCCEEEECTT
T ss_pred cCceEEEEecCCCCCeECHHHHHHHH--hhCCEEEEEEcCCcCCcccC----CHHHHHHHHHHHhhccCCCCcEEEEccc
Confidence 35567777753 799999999 44688999888888899886 899999999996 9999999999
Q ss_pred cCcCC--cCcccccccCCCCcCeee--ecccccCCchhhhhheecHH-hh-hccC---CCCCC------CCCCCcHHHHH
Q psy6547 84 TGLGR--TGKLLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDE-VM-GTLV---PGTHG------STYGGNPLACK 148 (266)
Q Consensus 84 ~~~~~--~g~~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~~~-~~-~~~~---~~~~~------~~~~~~~~~~~ 148 (266)
.++.. ..........--..|.++ .+|++.+| ++.|+++++.+ .. +.+. .+... ...+.+.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 311 (452)
T 2dgk_A 233 GGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVI 311 (452)
T ss_dssp GGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHH
T ss_pred HHHHHHhhCccchhhcCCCCCcEEEECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHH
Confidence 76521 011111111011355555 45977788 89999988643 33 3332 11100 01111111223
Q ss_pred HHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEE----ecCccceeeEEEEeeCc--cchHHHHHHHH
Q psy6547 149 LAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLS----SGGLKKSINTLILSVSA--ILEVYDVCIKM 219 (266)
Q Consensus 149 a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~--~~~~~~~~~~l 219 (266)
+..++++.+.. ++..++..++++++.+.|++ ++. +....+ .... ++.|.++... ..+..++.++|
T Consensus 312 ~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~--~~~~~~~~~~~~~~---~v~f~~~~~~~~~~~~~~l~~~L 385 (452)
T 2dgk_A 312 AQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK-LGP--YEFICTGRPDEGIP---AVCFKLKDGEDPGYTLYDLSERL 385 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSS--EEEEEECCTTTBSS---EEEEEECTTCCCSCCHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-CCC--eEEecCCCCCCCeE---EEEEEecCcccccCCHHHHHHHH
Confidence 33344444433 34677788888999999887 432 221011 1234 7888776411 13458899999
Q ss_pred HHCCceecc----C---CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 220 KDAGLVTKP----I---SNNIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 220 ~~~gi~~~~----~---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.++|+.+.. . +.+++|++++..+|+++++++++.|+++++.+.
T Consensus 386 ~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 386 RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999996542 2 245899999988999999999999999887754
No 199
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.75 E-value=1.2e-16 Score=143.30 Aligned_cols=233 Identities=11% Similarity=0.024 Sum_probs=155.2
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc------CCEEEEeccc
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY------NVLFIADEVQ 83 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~------g~~li~De~~ 83 (266)
++.+++.++.+ |+++|++++ .+++++|+++...+++|.+. ++++|.++|+++ |+++++|++|
T Consensus 174 ~G~~~~~v~~~~~~~~~d~~~l~~~i--~~~t~~v~~~~~~n~tG~~~----~l~~I~~ia~~~~~~~~~~~~l~VD~A~ 247 (502)
T 3hbx_A 174 FEVELKEVKLSEGYYVMDPQQAVDMV--DENTICVAAILGSTLNGEFE----DVKLLNDLLVEKNKETGWDTPIHVDAAS 247 (502)
T ss_dssp TTCEEEEECCBTTBCSCCHHHHHHHC--CTTEEEEEEEBSCTTTCCBC----CHHHHHHHHHHHHHHHCCCCCEEEECTT
T ss_pred cCceeEEEecCCCcCcCCHHHHHHHH--hhCCEEEEEecCCCCCCccc----CHHHHHHHHHHhhhccCCCCeEEEECCc
Confidence 45667777643 799999999 45688888888888889886 899999999999 9999999999
Q ss_pred cCcCC---cCc-ccccccCCCCcCeee--ecccccCCchhhhhheec-HHhh-hccC---CCCC------CCCCCCcHHH
Q psy6547 84 TGLGR---TGK-LLAIHYEDVRPDIVI--LGKALSGGLYPISAVLAD-DEVM-GTLV---PGTH------GSTYGGNPLA 146 (266)
Q Consensus 84 ~~~~~---~g~-~~~~~~~~~~~d~~~--~sK~~~~g~~~~g~~~~~-~~~~-~~~~---~~~~------~~~~~~~~~~ 146 (266)
.++.. .+. .+.+... ..|.++ ..|++.++ .+.|+++.. ++.+ +.+. .+.. ...++.+...
T Consensus 248 ~~~~~p~~~~~~~~~~~~~--~~D~v~~s~hK~l~~p-~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~ 324 (502)
T 3hbx_A 248 GGFIAPFLYPELEWDFRLP--LVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQ 324 (502)
T ss_dssp GGGTHHHHCTTCCCSTTST--TEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHH
T ss_pred cchhhhhhCcccccccCCC--CceEEEECcccccCCC-CCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHH
Confidence 76521 111 1111112 344444 66888777 778887764 3433 2221 1100 0112222223
Q ss_pred HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHC
Q psy6547 147 CKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDA 222 (266)
Q Consensus 147 ~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (266)
..+...+++.+.. .+..++..++++++.+.|++ ++. ..+.. ... .|++.|.++.....+..++.+.|.++
T Consensus 325 ~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~--~~~---~~~v~f~~~~~~~~~~~~l~~~L~~~ 398 (502)
T 3hbx_A 325 VIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK-TERFNIVSK--DEG---VPLVAFSLKDSSCHTEFEISDMLRRY 398 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEEECSC--SSS---SSEEEEEESSCSSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeC--CCC---ceEEEEEecCCCcCCHHHHHHHHHhC
Confidence 4444555555444 34667778888899999988 542 11110 012 24888888653235677999999999
Q ss_pred CceeccC-------CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 223 GLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 223 gi~~~~~-------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
|+.+... +..++|++++..+|+++++++++.|+++++++..
T Consensus 399 Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 399 GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9987521 2368999999999999999999999999887643
No 200
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.75 E-value=2.6e-17 Score=143.76 Aligned_cols=217 Identities=13% Similarity=0.133 Sum_probs=144.4
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcCCcCcccccccCCCCcCe
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDI 104 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~~~g~~~~~~~~~~~~d~ 104 (266)
.|+++|++++++. ++++|++++.++ |.+. ++++|+++|++||+++|+||+|. ++...|... .... ..|+
T Consensus 151 ~d~~~l~~~i~~~-~~~~v~~~~~~~--G~~~----~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~~--~~di 220 (417)
T 3n0l_A 151 IDYEKVREIAKKE-KPKLIVCGASAY--ARVI----DFAKFREIADEIGAYLFADIAHIAGLVVAGEHP-SPFP--YAHV 220 (417)
T ss_dssp CCHHHHHHHHHHH-CCSEEEECCSSC--CSCC----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CCTT--TCSE
T ss_pred cCHHHHHHHHHhc-CCeEEEECCccc--CccC----CHHHHHHHHHHcCCEEEEECccchhhhhcccCC-Cccc--cceE
Confidence 4899999999532 567888766443 6654 59999999999999999999973 321112211 1111 2456
Q ss_pred ee--ecccccCCchhhhhheec-HHhhhccCCCC-CCCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHh
Q psy6547 105 VI--LGKALSGGLYPISAVLAD-DEVMGTLVPGT-HGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSEL 177 (266)
Q Consensus 105 ~~--~sK~~~~g~~~~g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l 177 (266)
++ +||++ +| +++||++++ +++.+.+.... ...+.++++..+++...++..... +++.+++.++++++.+.|
T Consensus 221 ~~~s~sK~l-~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 298 (417)
T 3n0l_A 221 VSSTTHKTL-RG-PRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVL 298 (417)
T ss_dssp EEEESSTTT-CS-CSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCcccc-CC-CCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 55 55999 55 678999998 67776665332 233334455566666666655322 356777888888888888
Q ss_pred hcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----------CCCEEEEeccC----CCC
Q psy6547 178 SSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPAL----NIT 243 (266)
Q Consensus 178 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~iR~~~~~----~~t 243 (266)
++ .+...... ...+. ++++.+... +.+..++.+.|.++||.+.+. ..+.+|++++. ..+
T Consensus 299 ~~-~g~~~~~~--~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 371 (417)
T 3n0l_A 299 MD-RKFKLVSD--GTDNH---LVLMSFLDR-EFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFK 371 (417)
T ss_dssp HH-TTCEEGGG--SCSSS---EEEEECTTS-SSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCC
T ss_pred Hh-CCceeccC--CCCce---EEEEEcccC-CCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCC
Confidence 87 43211110 12234 778777531 346788899999999998742 23679998653 367
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy6547 244 EQELREGLDIIINTINTM 261 (266)
Q Consensus 244 ~~~i~~~~~~l~~~~~~~ 261 (266)
++++++++++|++++++.
T Consensus 372 ~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 372 EKEMEIVSNYIADILDDV 389 (417)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999998754
No 201
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.75 E-value=3.1e-19 Score=155.21 Aligned_cols=222 Identities=14% Similarity=0.035 Sum_probs=146.8
Q ss_pred ccCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc
Q psy6547 12 EFGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 12 ~~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~ 91 (266)
.+...+.+++.++.+ .+.++ .+++++++++.++|++|.+. + +|++.+++++++||+||+|.. .. ..
T Consensus 135 ~~~~~g~~~~~~~~d-~~~l~-----~~~~k~v~l~~p~NPtG~~~-~-----~l~~~~~~~~~~ii~De~y~~-~~-~~ 200 (391)
T 3bwn_A 135 ETTYVRSGMYKWEGD-AWGFD-----KKGPYIELVTSPNNPDGTIR-E-----TVVNRPDDDEAKVIHDFAYYW-PH-YT 200 (391)
T ss_dssp HHHTTCBTTEEEEEE-STTCC-----CCSCEEEEEESSCTTTCCCC-C-----CCC-----CCCEEEEECTTCS-TT-TS
T ss_pred HHHHcCCeEEEecCC-HHHcC-----CCCCEEEEECCCCCCCchhH-H-----HHHHHhhcCCCEEEEeCCCCC-CC-CC
Confidence 344556677776653 23322 24678888877888899874 3 344422233399999999962 11 11
Q ss_pred ccccccCCCCcCeeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh---------h-
Q psy6547 92 LLAIHYEDVRPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---------E- 159 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~- 159 (266)
.+. ...+....+.++||.++ +| +|+||+++ ++++.+.+.......+++.+++++.++..+|+... .
T Consensus 201 ~l~-~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 278 (391)
T 3bwn_A 201 PIT-RRQDHDIMLFTFSKITGHAG-SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESEN 278 (391)
T ss_dssp CCC-CCBCCSEEEEEHHHHHSCGG-GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTS
T ss_pred ccc-cCCCCeEEEEechhhcCCCc-cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHH
Confidence 111 12344556667999998 88 99999997 88888777654333456778899998888887642 1
Q ss_pred --ccHHHHHHHHHHHHHHHhhccccc-CCCc-cc---------EEecCccceeeEEEEeeCccchHHHHHHHHHHCCcee
Q psy6547 160 --ENMIENAYKMGEIFRSELSSPANK-SKAS-FK---------LSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVT 226 (266)
Q Consensus 160 --~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 226 (266)
+.++++++++++.+.+.|++ ++. .... .. .+..|+ ++|+.+++ . +.+.+.|.++||.+
T Consensus 279 ~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~~~~~~f~~~~~~~~g~---~~~~~~~~--~---~~~~~~l~~~gV~v 349 (391)
T 3bwn_A 279 FFKYGREMMKNRWEKLREVVKE-SDAFTLPKYPEAFCNYFGKSLESYPA---FAWLGTKE--E---TDLVSELRRHKVMS 349 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CSSEECCCCCCEEETTTTEEECCCCS---EEEEEESS--S---CCHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccccccccCCCcce---EEEecCCc--H---HHHHHHHHHCCEEE
Confidence 34677788888889999888 531 1110 00 123456 78888865 1 34667778999999
Q ss_pred ccC-----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 227 KPI-----SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 227 ~~~-----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.|+ +.+++|+++. .+++++++++++|.+++++
T Consensus 350 ~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 350 RAGERCGSDKKHVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp EEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred ccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 985 2579999955 5899999999999887654
No 202
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.74 E-value=9.4e-18 Score=146.24 Aligned_cols=224 Identities=13% Similarity=0.077 Sum_probs=146.5
Q ss_pred CCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccc
Q psy6547 15 PHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA 94 (266)
Q Consensus 15 ~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~ 94 (266)
.++.+++.++.+|++++++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+||+|+.. ....+
T Consensus 129 ~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~G~~~----~l~~i~~la~~~g~~livDe~~~~~-~~~~~-- 199 (400)
T 3nmy_A 129 TAGLDFSFVDLTDPAAFKAAI--RADTKMVWIETPTNPMLKLV----DIAAIAVIARKHGLLTVVDNTFASP-MLQRP-- 199 (400)
T ss_dssp HHCCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHTTCEEEEECTTTHH-HHCCG--
T ss_pred hcCeEEEEECCCCHHHHHHHh--ccCCCEEEEECCCCCCCeee----cHHHHHHHHHHcCCEEEEECCCccc-ccCCh--
Confidence 357889999999999999999 45799999999999999886 6999999999999999999999521 11111
Q ss_pred cccCCCCcCeeeecccccCCchhhhh--he-ecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q psy6547 95 IHYEDVRPDIVILGKALSGGLYPISA--VL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGE 171 (266)
Q Consensus 95 ~~~~~~~~d~~~~sK~~~~g~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 171 (266)
..++.++.+.+++|+++|+..++|+ ++ .++++.+.+...........+++.+..+...++.+. ...++..++..
T Consensus 200 -~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l~--~r~~~~~~~a~ 276 (400)
T 3nmy_A 200 -LSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTLP--LRMRAHCENAL 276 (400)
T ss_dssp -GGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHH
T ss_pred -hhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHH
Confidence 1235566666699999943255554 33 466776666543344445667777777666665432 23455566777
Q ss_pred HHHHHhhccccc------CCCcc---------cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC-------
Q psy6547 172 IFRSELSSPANK------SKASF---------KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI------- 229 (266)
Q Consensus 172 ~l~~~l~~~~~~------~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------- 229 (266)
.+.+.|++ .+. +.++. ..++.|. +++|+++.. ......|++.|.-.++.+..+
T Consensus 277 ~l~~~L~~-~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~---~~~~~l~~~-~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 351 (400)
T 3nmy_A 277 ALAQWLET-HPAIEKVIYPGLASHPQHVLAKRQMSGFGG---IVSIVLKGG-FDAAKRFCEKTELFTLAESLGGVESLVN 351 (400)
T ss_dssp HHHHHHTT-CTTEEEEECTTSTTSTTHHHHHHHCSSCCS---EEEEEETTH-HHHHHHHHHHCSSSEECSCCCSSSCEEE
T ss_pred HHHHHHHc-CCCEeEEECCCCCCCcCHHHHHHhCCCCCc---eEEEEeCCc-HHHHHHHHHcCCcceEecCCCCCcceee
Confidence 77777765 221 11111 0145688 999999651 123556666665333222211
Q ss_pred --------------------CCCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 230 --------------------SNNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 230 --------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
..+.+|+|...... +.+++.|+++++
T Consensus 352 ~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~----~dli~dl~~al~ 397 (400)
T 3nmy_A 352 HPAVMTHASIPVARREQLGISDALVRLSVGIEDL----GDLRGDLERALV 397 (400)
T ss_dssp CTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCH----HHHHHHHHHHHC
T ss_pred CccccccccCCHHHHHhcCCCcCeEEEEeCcCCH----HHHHHHHHHHHh
Confidence 24789999766544 445555666554
No 203
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.74 E-value=2.4e-17 Score=144.65 Aligned_cols=225 Identities=15% Similarity=0.140 Sum_probs=146.7
Q ss_pred CCCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-Cc
Q psy6547 14 GPHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GL 86 (266)
Q Consensus 14 ~~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~ 86 (266)
...+.+++.++.+ |+++|++.+ .+++++|++++ ++|... ++++|.++|+++|+++|+||+|+ |+
T Consensus 108 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~---~tG~~~----~l~~i~~la~~~~~~li~Dea~~~g~ 178 (424)
T 2po3_A 108 RWIGLTPVFADIDPDTGNLDPDQVAAAV--TPRTSAVVGVH---LWGRPC----AADQLRKVADEHGLRLYFDAAHALGC 178 (424)
T ss_dssp HHTTCEEEEECBCTTTSSBCHHHHGGGC--CTTEEEEEEEC---GGGCCC----CHHHHHHHHHHTTCEEEEECTTCTTC
T ss_pred HHcCCEEEEEecCCCcCCcCHHHHHHhh--CcCCcEEEEEC---CCCCcC----CHHHHHHHHHHcCCEEEEECccccCC
Confidence 3346677777654 789999888 34688888754 455543 99999999999999999999997 55
Q ss_pred CCcCcccccccCCCCcCeee--ec--ccccCCchhhhhheec-HHhhhccCCCC------------CCCCCCCcHHHHHH
Q psy6547 87 GRTGKLLAIHYEDVRPDIVI--LG--KALSGGLYPISAVLAD-DEVMGTLVPGT------------HGSTYGGNPLACKL 149 (266)
Q Consensus 87 ~~~g~~~~~~~~~~~~d~~~--~s--K~~~~g~~~~g~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~a 149 (266)
...|.. . +..+|+++ +| |++++ .++|+++++ +++.+.+.... .+.++..+++.+++
T Consensus 179 ~~~~~~--~---~~~~di~~~S~sk~K~l~~--~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 251 (424)
T 2po3_A 179 AVDGRP--A---GSLGDAEVFSFHATKAVNA--FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAM 251 (424)
T ss_dssp EETTEE--T---TSSSSEEEEECCTTSSSCC--SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHH
T ss_pred eECCee--c---ccccCEEEEeCCCCCCccC--CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHH
Confidence 433321 1 11235555 55 76655 589999998 67765543210 11122345566655
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-cCCCcccEEe-c--CccceeeEEEEeeCc-cchHHHHHHHHHHCCc
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPAN-KSKASFKLSS-G--GLKKSINTLILSVSA-ILEVYDVCIKMKDAGL 224 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~-~--g~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi 224 (266)
+...++.+ +.+.++.+++.+++++.|.+ +. ...... ..+ . .. ++++.+++.. +.+..++.+.|.++||
T Consensus 252 ~l~~~~~~--~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~~~~~~~~~---~~~i~~~~~~~~~~~~~l~~~L~~~gI 324 (424)
T 2po3_A 252 GLTSLDAF--PEVIDRNRRNHAAYREHLAD-LPGVLVADH-DRHGLNNHQ---YVIVEIDEATTGIHRDLVMEVLKAEGV 324 (424)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHTCS-CTTEEECCG-GGGSCCCCC---CEEEEECHHHHSSCHHHHHHHHHHTTE
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHhcc-CCCccccCC-CCCCccccE---EEEEEECCccchhhHHHHHHHHHHCCC
Confidence 55544433 34677777888888888877 42 111111 111 1 13 5556665300 2357889999999999
Q ss_pred eeccCCC-------------------------CEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 225 VTKPISN-------------------------NIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 225 ~~~~~~~-------------------------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.+++... ..+|++++..++++++++++++|.+++++.
T Consensus 325 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 325 HTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp ECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 9986311 128888789999999999999999987664
No 204
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.73 E-value=1.1e-17 Score=145.72 Aligned_cols=202 Identities=9% Similarity=0.070 Sum_probs=140.1
Q ss_pred CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeee--ecccccCCc
Q psy6547 38 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGGL 115 (266)
Q Consensus 38 ~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~--~sK~~~~g~ 115 (266)
.+++++|++++++|++|.+. +. ++|.++ +|+++|+||+|+.+.. ..... + +|+++ +||+++++
T Consensus 163 ~~~~~~v~~~~~~nptG~~~-~~---~~i~~~---~~~~vivD~a~~~~~~---~~~~~--~--~di~~~s~sK~~~~~- 227 (398)
T 2fyf_A 163 DPSVDVIAWAHNETSTGVAV-AV---RRPEGS---DDALVVIDATSGAGGL---PVDIA--E--TDAYYFAPQKNFASD- 227 (398)
T ss_dssp CTTCSEEEEESEETTTTEEC-CC---CCCTTC---C-CEEEEECTTTTTTS---CCCGG--G--CSEEEECTTSTTCSC-
T ss_pred cCCCCEEEEeCcCCCcceec-ch---HHhhhh---cCCeEEEEeccccCCc---ccCcc--c--CcEEEEecCcccCCC-
Confidence 44688998888889899874 44 444444 8999999999964421 11121 2 45555 67999955
Q ss_pred hhhhhheecHHhhhccCC----------CC-----------CCCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHH
Q psy6547 116 YPISAVLADDEVMGTLVP----------GT-----------HGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMG 170 (266)
Q Consensus 116 ~~~g~~~~~~~~~~~~~~----------~~-----------~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~ 170 (266)
.++|++++++++.+.++. .. .....+.+..++.++.++++.+.. +++.+++++++
T Consensus 228 gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 228 GGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp SSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 358999999888765521 00 122235566677777788876554 34677888889
Q ss_pred HHHHHHhhcccc-cCCCcccE-EecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccC----CCCEEEEeccCCCCH
Q psy6547 171 EIFRSELSSPAN-KSKASFKL-SSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPALNITE 244 (266)
Q Consensus 171 ~~l~~~l~~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~iR~~~~~~~t~ 244 (266)
+++.+.|++ +. ........ ...+. ++++.+++ +.+..+++++|.++||.++++ +.+++|++++..+++
T Consensus 308 ~~l~~~L~~-~~g~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~ 381 (398)
T 2fyf_A 308 QRLYSWAQE-RPYTTPFVTDPGLRSQV---VGTIDFVD--DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEP 381 (398)
T ss_dssp HHHHHHHHH-STTEEESCCSGGGBCSS---EEEEEECT--TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCH
T ss_pred HHHHHHHHH-cCCceeccCChhhcCCc---EEEEECCC--CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCH
Confidence 999999987 52 21111001 01344 78888865 567889999999999999864 247899999888899
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6547 245 QELREGLDIIINTINT 260 (266)
Q Consensus 245 ~~i~~~~~~l~~~~~~ 260 (266)
+++++++++|++++++
T Consensus 382 e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 382 DDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 205
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.72 E-value=8e-17 Score=144.86 Aligned_cols=230 Identities=13% Similarity=0.058 Sum_probs=148.1
Q ss_pred CceeecCC-----CHHHHHHHHhcC----CCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 19 GYNIIPYN-----DVDALEAKLKSN----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 19 ~v~~~~~~-----d~~~l~~~l~~~----~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+++.+|.+ |+++|+++++++ .++++|+++..++++|.+. ++++|+++|++||+++++|++|+++...
T Consensus 229 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~----~l~~I~~la~~~g~~l~vD~a~~~~~~~ 304 (515)
T 2jis_A 229 SVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD----PLEAIADVCQRHGLWLHVDAAWGGSVLL 304 (515)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc----CHHHHHHHHHHcCCeEEEehhhhhHHHh
Confidence 78888864 799999999652 2588999988888889875 7999999999999999999999765333
Q ss_pred CcccccccCCC-CcCeeee--cccccCCchhhhhheecHH--hhhcc----CCCCCC-----------CCC------CCc
Q psy6547 90 GKLLAIHYEDV-RPDIVIL--GKALSGGLYPISAVLADDE--VMGTL----VPGTHG-----------STY------GGN 143 (266)
Q Consensus 90 g~~~~~~~~~~-~~d~~~~--sK~~~~g~~~~g~~~~~~~--~~~~~----~~~~~~-----------~~~------~~~ 143 (266)
...+.....++ .+|++++ +|+++++ ++.|+++++++ +++.. ..+... .++ ...
T Consensus 305 ~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~ 383 (515)
T 2jis_A 305 SQTHRHLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVD 383 (515)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCC
T ss_pred ChhhHhhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCccc
Confidence 22222223344 5777775 8999877 78899888765 54431 111100 001 111
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeC--cc----ch-----
Q psy6547 144 PLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVS--AI----LE----- 211 (266)
Q Consensus 144 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~--~~----~~----- 211 (266)
.+.+.+++.++....-+++.++..++++++.+.|++ +.. ..+.. .... .+.|..... .+ .+
T Consensus 384 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~~~---~~~~---~v~f~~~p~~~~~~~~~~~~~~~l 456 (515)
T 2jis_A 384 CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK-REGFELVME---PEFV---NVCFWFVPPSLRGKQESPDYHERL 456 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEEESSC---CSSS---EEEEEECCGGGTTCTTSTTHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCC---CCee---EEEEEEeCccccccccchhHHHHH
Confidence 333444444443222245778888899999999988 432 21211 1122 455544211 00 01
Q ss_pred ---HHHHHHHHHHCCceecc-----CCCCEEEEec-cCCCCHHHHHHHHHHHHHHHHH
Q psy6547 212 ---VYDVCIKMKDAGLVTKP-----ISNNIIRLSP-ALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 212 ---~~~~~~~l~~~gi~~~~-----~~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
...+.+.|.++|+.... ...+++|+++ +..+|++|+++++++|++++++
T Consensus 457 ~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 457 SKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 12367788888976532 2246899999 7889999999999999987654
No 206
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.72 E-value=1.2e-17 Score=147.61 Aligned_cols=201 Identities=10% Similarity=-0.040 Sum_probs=136.6
Q ss_pred CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC-CcCcccccccCCCCcCeee--ecccccCC
Q psy6547 38 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG-RTGKLLAIHYEDVRPDIVI--LGKALSGG 114 (266)
Q Consensus 38 ~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~-~~g~~~~~~~~~~~~d~~~--~sK~~~~g 114 (266)
+++++++++++ ++++|.+. ++++|.++|++||+++|+||+|+++. ..+..+..... .+|+++ ++|+++++
T Consensus 144 ~~~~~~v~~~~-~n~~G~~~----~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~--g~Di~~~S~~K~l~~~ 216 (446)
T 2x3l_A 144 NDGHKLVVLTY-PNYYGETF----NVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNY--QADYVVQSFHKTLPAL 216 (446)
T ss_dssp ---CCEEEEES-SCTTSCCC----CHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGG--TCSEEEECHHHHSSSC
T ss_pred CCCceEEEEEC-CCCCeEec----CHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHc--CCCEEEECCccccccc
Confidence 45678888887 56688875 68999999999999999999997522 22222222223 356666 55998877
Q ss_pred chhhhhheecHHhhh--ccCC-CCCCCCCCCcHHHHHHHHHHHHHHhhc--c-HHHHHHHHHHHHHHHhhcccccCCCcc
Q psy6547 115 LYPISAVLADDEVMG--TLVP-GTHGSTYGGNPLACKLAMTALDVILEE--N-MIENAYKMGEIFRSELSSPANKSKASF 188 (266)
Q Consensus 115 ~~~~g~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~--~-~~~~~~~~~~~l~~~l~~~~~~~~~~~ 188 (266)
.++|++++++++++ .+.. .....+.+++...+++..++++.++.. + +.++.+++.++++++ . +..
T Consensus 217 -~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~--g------~~~ 287 (446)
T 2x3l_A 217 -TMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK--G------FEM 287 (446)
T ss_dssp -TTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--T------CEE
T ss_pred -cccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc--C------CEE
Confidence 67899988776543 2211 012234455666666666777777653 2 677777777777666 1 111
Q ss_pred cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 189 KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
.....+. .+++.++ +.+..++.+.|.++||.+...+.+++|++++..+|++++ +++++|+++++..
T Consensus 288 ~~~~~~~---~l~i~~~---~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 288 LQVDDPL---KLLIKYE---GFTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp EECSSTT---EEEEECT---TSCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred CcCCCCe---EEEEEeC---CcCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 0011234 6777764 246788999999999999844568999999988899999 9999999987654
No 207
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.72 E-value=3e-17 Score=141.29 Aligned_cols=217 Identities=17% Similarity=0.142 Sum_probs=146.5
Q ss_pred CCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-cC
Q psy6547 15 PHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LG 87 (266)
Q Consensus 15 ~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~-~~ 87 (266)
..+.+++.++.+ |+++|++++ .+++++|++++ ++|... ++++|.++|++||+++|+|++|+. ..
T Consensus 94 ~~G~~~~~~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~---~~G~~~----~~~~i~~la~~~~~~li~D~a~~~g~~ 164 (367)
T 3nyt_A 94 LLGAKPVYVDIDPRTYNLDPQLLEAAI--TPRTKAIIPVS---LYGQCA----DFDAINAIASKYGIPVIEDAAQSFGAS 164 (367)
T ss_dssp HTTCEEEEECBCTTTCSBCGGGTGGGC--CTTEEEECCBC---GGGCCC----CHHHHHHHHHHTTCCBEEECTTTTTCE
T ss_pred HcCCEEEEEecCCccCCcCHHHHHHhc--CcCCcEEEeeC---CccChh----hHHHHHHHHHHcCCEEEEECccccCCe
Confidence 345667777643 789999998 45788888443 456554 899999999999999999999952 21
Q ss_pred CcCcccccccCCCCcCeeeec----ccccC-Cchhhhhhee-cHHhhhccCCC------------CCCCCCCCcHHHHHH
Q psy6547 88 RTGKLLAIHYEDVRPDIVILG----KALSG-GLYPISAVLA-DDEVMGTLVPG------------THGSTYGGNPLACKL 149 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~s----K~~~~-g~~~~g~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~a 149 (266)
..|. ..+...|++++| |.+++ | . .|+++. ++++.+.+... ..+.++..+++.+++
T Consensus 165 ~~~~-----~~~~~~di~~~Sf~~~K~l~~~g-~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~ 237 (367)
T 3nyt_A 165 YKGK-----RSCNLSTVACTSFFPSAPLGCYG-D-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAI 237 (367)
T ss_dssp ETTE-----ETTSSSSEEEEECCTTSSSCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHH
T ss_pred ECCe-----eccCCCCEEEEECCCCCcCCCcC-c-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHH
Confidence 1122 112222777765 99997 7 4 777777 45665544321 113467788888888
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCc--ccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPANKSKAS--FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK 227 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 227 (266)
+...++.+ ++..++.+++.+++++.|++ ++..... ........ ++.+..+ +.+++.+.|.++||.++
T Consensus 238 ~~~~l~~~--~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~l~~~L~~~GI~~~ 306 (367)
T 3nyt_A 238 LLPKLEIF--EEEIALRQKVAAEYDLSLKQ-VGIGTPFIEVNNISVYA---QYTVRMD-----NRESVQASLKAAGVPTA 306 (367)
T ss_dssp HHHHHHTH--HHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTEECCCS---SEEEECS-----SHHHHHHHHHHHTCCCB
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHhcc-CCeeccCCCCCCceeeE---EEEEEeC-----CHHHHHHHHHHCCCcee
Confidence 88777654 44677788888899999988 5421111 10111112 2333332 47789999999999887
Q ss_pred cCC------------------------CCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 228 PIS------------------------NNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 228 ~~~------------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+.. ...+|+.++...|++|++++++.|.+.-
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~ 361 (367)
T 3nyt_A 307 VHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNLE 361 (367)
T ss_dssp CSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC--
T ss_pred ccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 432 1578999999999999999999998653
No 208
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.71 E-value=2.6e-16 Score=136.79 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=148.5
Q ss_pred CCCCCCceeecC-----CCHHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-Cc
Q psy6547 14 GPHMPGYNIIPY-----NDVDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GL 86 (266)
Q Consensus 14 ~~~~~~v~~~~~-----~d~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~ 86 (266)
...+.+++.++. .|+++|++.+++.+ ++++|++++ ++|.. .++++|.++|+++|+++|+||+|+ |+
T Consensus 90 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~----~~l~~i~~l~~~~~~~li~Dea~~~g~ 162 (394)
T 1o69_A 90 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA----AKMDEIVEICKENDIVLIEDAAEALGS 162 (394)
T ss_dssp HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC----CCHHHHHHHHHHTTCEEEEECTTCTTC
T ss_pred HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh----hhHHHHHHHHHHcCCEEEEECcCcccc
Confidence 335667777774 37999999996532 578888876 34544 399999999999999999999997 54
Q ss_pred CCcCcccccccCCCCcCeeee--cccccCCchhhhhheec-HHhhhccCCCCC-C-------------CCCCCcHHHHHH
Q psy6547 87 GRTGKLLAIHYEDVRPDIVIL--GKALSGGLYPISAVLAD-DEVMGTLVPGTH-G-------------STYGGNPLACKL 149 (266)
Q Consensus 87 ~~~g~~~~~~~~~~~~d~~~~--sK~~~~g~~~~g~~~~~-~~~~~~~~~~~~-~-------------~~~~~~~~~~~a 149 (266)
...|... ..++ .+++.++ +|.++ | .++|+++++ +++.+.+..... . ..+..+++.+++
T Consensus 163 ~~~~~~~--~~~~-~~~~~s~s~~K~l~-~-~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 237 (394)
T 1o69_A 163 FYKNKAL--GTFG-EFGVYSYNGNKIIT-T-SGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAI 237 (394)
T ss_dssp EETTEET--TSSS-SEEEEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHH
T ss_pred eeCCccc--cccc-CcEEEEEeCCccCC-C-CCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHH
Confidence 3333211 1111 3677777 56665 4 579999995 676655532110 0 111145566655
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCccc--EEecCccceeeEEEEeeCc-------------------
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFK--LSSGGLKKSINTLILSVSA------------------- 208 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~------------------- 208 (266)
+...++.++ +..++++++.+++++.|++ + ....+.. ..+... ++++.++...
T Consensus 238 ~l~~l~~l~--~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T 1o69_A 238 GVAQMEVLE--QRVLKKREIYEWYKEFLGE-Y-FSFLDELENSRSNRW---LSTALINFDKNELNACQKDINISQKNITL 310 (394)
T ss_dssp HHHHHTTHH--HHHHHHHHHHHHHHHHHTT-T-EECCCCCTTEECCCS---SEEEEESCCGGGSCCCCEEEECCCCCCCC
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHhcc-c-ccccCCCCCCcceeE---EEEEEecchhhcccccccccccccccccc
Confidence 555554433 3678888899999999988 4 2121110 011111 4667765310
Q ss_pred cchHHHHHHHHHHCCceeccCCC------------------------CEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 209 ILEVYDVCIKMKDAGLVTKPISN------------------------NIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 209 ~~~~~~~~~~l~~~gi~~~~~~~------------------------~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+.+..++.+.|.++||.++++.. ..+++..+..+|++|++++++.|++++..
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 13678899999999999986510 34566667889999999999999987654
No 209
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.70 E-value=2.9e-17 Score=143.76 Aligned_cols=227 Identities=11% Similarity=-0.017 Sum_probs=145.1
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCcCCcCc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGK 91 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~--~g~~li~De~~~~~~~~g~ 91 (266)
..++.+++.++.+|+++|++++ .+++++|+++.++|++|.+. ++++|.++|++ +|+++|+|++|... ..+.
T Consensus 143 ~~~G~~v~~v~~~d~~~le~ai--~~~tklV~~e~~~NptG~v~----dl~~I~~la~~~~~g~~livD~a~a~~-~~~~ 215 (415)
T 2fq6_A 143 SKLGVTTSWFDPLIGADIVKHL--QPNTKIVFLESPGSITMEVH----DVPAIVAAVRSVVPDAIIMIDNTWAAG-VLFK 215 (415)
T ss_dssp GGGTCEEEEECTTCGGGGGGGC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHHCTTCEEEEECTTTTT-TSSC
T ss_pred HHcCcEEEEECCCCHHHHHHhh--ccCCcEEEEECCCCCCCEee----cHHHHHHHHHhhcCCCEEEEECCCccc-ccCC
Confidence 3457889999999999999999 45799999999999999987 79999999999 99999999999532 1122
Q ss_pred ccccccCCCCcCeeeecccccCCc-hhhhhheecHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q psy6547 92 LLAIHYEDVRPDIVILGKALSGGL-YPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMG 170 (266)
Q Consensus 92 ~~~~~~~~~~~d~~~~sK~~~~g~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 170 (266)
+. .++.+.-+.+++|.++++. ..+|++++++++.+.+...........++..+..+..+++.+. ...++..++.
T Consensus 216 p~---~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~l~--~r~~~~~~n~ 290 (415)
T 2fq6_A 216 AL---DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLG--VRLRQHHESS 290 (415)
T ss_dssp GG---GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cc---ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHH--HHHHHHHHHH
Confidence 21 2344444445889999531 2368888887776655432111112345555555555555432 2344445566
Q ss_pred HHHHHHhhcccc------cCCCccc---------EEecCccceeeEEEEeeC-ccchHHHHHHHHHHCCceec-------
Q psy6547 171 EIFRSELSSPAN------KSKASFK---------LSSGGLKKSINTLILSVS-AILEVYDVCIKMKDAGLVTK------- 227 (266)
Q Consensus 171 ~~l~~~l~~~~~------~~~~~~~---------~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~------- 227 (266)
..+.+.|++ .. .+.+... ..+.|. +++|.++.. +..+...|...|.-.++.++
T Consensus 291 ~~l~~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~---i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~ 366 (415)
T 2fq6_A 291 LKVAEWLAE-HPQVARVNHPALPGSKGHEFWKRDFTGSSG---LFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESL 366 (415)
T ss_dssp HHHHHHHHT-CTTEEEEECTTSTTSTTHHHHHHHCSCCCS---EEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCE
T ss_pred HHHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCce---EEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCcee
Confidence 666676665 21 1111110 013466 899998751 01245556655543232221
Q ss_pred -----c-------------CCCCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 228 -----P-------------ISNNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 228 -----~-------------~~~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
| ...+.+|+|++..+++++++.+.+.|++
T Consensus 367 ~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 367 ILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp EEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred EEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 1 0247899999999988888888887764
No 210
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.70 E-value=2.2e-16 Score=138.59 Aligned_cols=221 Identities=15% Similarity=0.090 Sum_probs=140.8
Q ss_pred CCCCCceee-cCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 15 PHMPGYNII-PYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 15 ~~~~~v~~~-~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..+.+++.+ +.+|++++++++ .+++++|++++++|++|.+. ++++|+++|++||+++|+|++|++++..+..+
T Consensus 120 ~~g~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~n~~G~~~----~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~ 193 (421)
T 2ctz_A 120 RLGIEVRFTSREERPEEFLALT--DEKTRAWWVESIGNPALNIP----DLEALAQAAREKGVALIVDNTFGMGGYLLRPL 193 (421)
T ss_dssp HTTCEEEECCTTCCHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHHHTCEEEEECGGGGGGTSCCGG
T ss_pred HcCCEEEEECCCCCHHHHHHhh--ccCCeEEEEECCCCCCCccc----CHHHHHHHHHHcCCEEEEECCcccccccCCcc
Confidence 356788889 888999999999 45799999999999999886 59999999999999999999995454433332
Q ss_pred ccccCCCCcCee--eecccccC-CchhhhhheecH---Hh----hhccCCC---CCC-----------------------
Q psy6547 94 AIHYEDVRPDIV--ILGKALSG-GLYPISAVLADD---EV----MGTLVPG---THG----------------------- 137 (266)
Q Consensus 94 ~~~~~~~~~d~~--~~sK~~~~-g~~~~g~~~~~~---~~----~~~~~~~---~~~----------------------- 137 (266)
+..+|++ +++|++++ | .++|++++.. ++ .+.+... .+.
T Consensus 194 -----~~~~Di~~~s~~K~l~~~g-~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~ 267 (421)
T 2ctz_A 194 -----AWGAALVTHSLTKWVGGHG-AVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRD 267 (421)
T ss_dssp -----GGTCSEEEEETTTTTTCSS-CCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHH
T ss_pred -----ccCCeEEEECCcccccCCC-CcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHh
Confidence 2346666 68999995 6 6888877641 11 1112110 000
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc------CCCcccE----------EecCccceeeE
Q psy6547 138 STYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK------SKASFKL----------SSGGLKKSINT 201 (266)
Q Consensus 138 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~----------~~~g~~~~~~~ 201 (266)
.....+++.+.++...++.+. ...++..++.+++.+.|++ ... +.....+ ++.|. ++.
T Consensus 268 ~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~-~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~---ivs 341 (421)
T 2ctz_A 268 QGQALGPFEAWVVLLGMETLS--LRAERHVENTLHLAHWLLE-QPQVAWVNYPGLPHHPHHDRAQKYFKGKPGA---VLT 341 (421)
T ss_dssp HCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHT-CTTEEEEECTTSTTCTTHHHHHHHHTTCCCS---EEE
T ss_pred cCCCCCHHHHHHHHcCcchHH--HHHHHHHHhHHHHHHHHHh-CCCeeEEECCCCCCCCCHHHHHHhccCCCce---EEE
Confidence 112456666666665555432 2344455677788888876 321 1111000 24566 999
Q ss_pred EEEeeCccchHHHHHHHHHHCCceeccC---------------------------CCCEEEEeccCCCCHHHHHHHHHHH
Q psy6547 202 LILSVSAILEVYDVCIKMKDAGLVTKPI---------------------------SNNIIRLSPALNITEQELREGLDII 254 (266)
Q Consensus 202 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~---------------------------~~~~iR~~~~~~~t~~~i~~~~~~l 254 (266)
|.+... ..+...+.+.|...++.++.+ ..+.+|+|++. ++++++++.|
T Consensus 342 f~l~~~-~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l 416 (421)
T 2ctz_A 342 FGLKGG-YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAEL 416 (421)
T ss_dssp EEETTH-HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHH
T ss_pred EEeCCC-HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHH
Confidence 998651 123455555554444333221 14799999654 4677777777
Q ss_pred HHHH
Q psy6547 255 INTI 258 (266)
Q Consensus 255 ~~~~ 258 (266)
++++
T Consensus 417 ~~al 420 (421)
T 2ctz_A 417 KEAL 420 (421)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7664
No 211
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.68 E-value=1.7e-16 Score=139.02 Aligned_cols=229 Identities=10% Similarity=0.069 Sum_probs=143.4
Q ss_pred CCCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC-
Q psy6547 15 PHMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG- 87 (266)
Q Consensus 15 ~~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~- 87 (266)
-.+.+++.++.+ |+++|++.+ .+++++|++++ ++|... ++++|.++|++||+++|+||+|+.+.
T Consensus 101 ~~g~~~~~~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~---~~G~~~----~~~~i~~~~~~~~~~li~D~a~~~~~~ 171 (418)
T 2c81_A 101 NVNALPVFVDVEADTYCIDPQLIKSAI--TDKTKAIIPVH---LFGSMA----NMDEINEIAQEHNLFVIEDCAQSHGSV 171 (418)
T ss_dssp HTTCEEEEECBCTTTCSBCHHHHGGGC--CTTEEEECCBC---CTTCCC----CHHHHHHHHHHTTCEEEEECTTCTTCE
T ss_pred HcCCEEEEEecCCCCCCcCHHHHHHhh--CCCCeEEEEeC---CcCCcc----cHHHHHHHHHHCCCEEEEECcccccCc
Confidence 345667777654 789999988 34688888654 466654 89999999999999999999997653
Q ss_pred CcCcccccccCCCCcCeeee--cccccCCchhhhhheec-HHhhhccCCCC-C--------------CC-------CC--
Q psy6547 88 RTGKLLAIHYEDVRPDIVIL--GKALSGGLYPISAVLAD-DEVMGTLVPGT-H--------------GS-------TY-- 140 (266)
Q Consensus 88 ~~g~~~~~~~~~~~~d~~~~--sK~~~~g~~~~g~~~~~-~~~~~~~~~~~-~--------------~~-------~~-- 140 (266)
..+.. ...++ +.++.++ ||++++| ++|+++++ +++.+.+.... . .. ..
T Consensus 172 ~~~~~--~~~~~-~~~~~s~s~~K~~~~g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (418)
T 2c81_A 172 WNNQR--AGTIG-DIGAFSCQQGKVLTAG--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGS 246 (418)
T ss_dssp ETTEE--TTSSS-SEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCC
T ss_pred cCCEe--ccccc-ceEEEeccCCcccCCC--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCc
Confidence 12221 11111 2445556 8999875 68998884 66655443110 0 00 00
Q ss_pred --CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccc-eeeEEEEeeC--ccchHHH
Q psy6547 141 --GGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKK-SINTLILSVS--AILEVYD 214 (266)
Q Consensus 141 --~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~--~~~~~~~ 214 (266)
..+++..+.....++.+ ++..++.+++.+++.+.|++ +.. ..... ..+.+... +++.+.+++. .+.+..+
T Consensus 247 ~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (418)
T 2c81_A 247 NYCLSEFQSAILLDQLQEL--DDKNAIREKNAMFLNDALSK-IDGIKVMKR-PPQVSRQTYYGYVFRFDPVKFGGLNADQ 322 (418)
T ss_dssp BCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTT-STTEEECCC-CTTEEECCCSEEEEEECGGGTTTCCHHH
T ss_pred CCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcc-CCCcccCCC-CCCCcccccEEEEEEEccccccccCHHH
Confidence 12333333322223222 34667777788888888877 421 11111 11101100 1344566520 0346789
Q ss_pred HHHHHHHC-Cce---eccCC----------------------------------------CCEEEEeccCCC-CHHHHHH
Q psy6547 215 VCIKMKDA-GLV---TKPIS----------------------------------------NNIIRLSPALNI-TEQELRE 249 (266)
Q Consensus 215 ~~~~l~~~-gi~---~~~~~----------------------------------------~~~iR~~~~~~~-t~~~i~~ 249 (266)
+++.|.++ ||. ++++. .+.+|++++..+ |++|+++
T Consensus 323 l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~ 402 (418)
T 2c81_A 323 FCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSL 402 (418)
T ss_dssp HHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHH
T ss_pred HHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHH
Confidence 99999999 999 76431 148999999999 9999999
Q ss_pred HHHHHHHHHHHH
Q psy6547 250 GLDIIINTINTM 261 (266)
Q Consensus 250 ~~~~l~~~~~~~ 261 (266)
+++.|+++++++
T Consensus 403 ~~~~l~~~~~~~ 414 (418)
T 2c81_A 403 LVDAVAELARKF 414 (418)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 212
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.67 E-value=2e-16 Score=141.11 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=141.4
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcCCcCcc-cccccCCCCcC
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKL-LAIHYEDVRPD 103 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~~~g~~-~~~~~~~~~~d 103 (266)
.|+++|++++++ +++++|++ ..++++ .+. ++++|+++|+++|+++++|++|. |+...|.. ..+. + .|
T Consensus 180 iD~d~le~~i~~-~~tklIi~-~~sn~~-~~~----dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~--~d 248 (483)
T 1rv3_A 180 IDYDRLEENARL-FHPKLIIA-GTSCYS-RNL----DYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H--CH 248 (483)
T ss_dssp BCHHHHHHHHHH-HCCSEEEE-CCSSCC-SCC----CHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T--CS
T ss_pred CCHHHHHHHHhh-cCCcEEEE-eCCcCC-CcC----CHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C--Cc
Confidence 379999999953 35788888 555555 443 69999999999999999999984 32111211 1111 2 45
Q ss_pred eee--ecccccCCchhhhhheecHHhh---------------hccCCC-CCCCCCCCcHHHHHHHHHHHHHHhh---ccH
Q psy6547 104 IVI--LGKALSGGLYPISAVLADDEVM---------------GTLVPG-THGSTYGGNPLACKLAMTALDVILE---ENM 162 (266)
Q Consensus 104 ~~~--~sK~~~~g~~~~g~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~---~~~ 162 (266)
+++ ++|+|+ | ++.|++++++++. +.+... ......+++...+++...+++.... +++
T Consensus 249 iv~~s~~K~l~-G-prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~ 326 (483)
T 1rv3_A 249 VVTTTTHKTLR-G-CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEY 326 (483)
T ss_dssp EEEEESSGGGC-C-CSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred EEEecCcccCC-C-CCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHH
Confidence 554 779995 4 6789999876421 111110 0111223344455555667766543 457
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec----cC-----CCCE
Q psy6547 163 IENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK----PI-----SNNI 233 (266)
Q Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~-----~~~~ 233 (266)
.+++.++++++.+.|.+ ++...+.. ..... ++++.+... +.+..++.+.|.+.||.+. |+ +.++
T Consensus 327 ~~~~~~~~~~l~~~L~~-~g~~~~~~--~~~~~---~~~v~~~~~-g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~ 399 (483)
T 1rv3_A 327 QRQVVANCRALSAALVE-LGYKIVTG--GSDNH---LILVDLRSK-GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSG 399 (483)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCEEGGG--SCSSS---EEEEEGGGG-TCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCE
T ss_pred HHHHHHHHHHHHHHHHh-cCCEeccC--CCCCc---eEEEeccCC-CCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCce
Confidence 88888999999999987 43221111 00123 666766531 3467788889999999998 64 2479
Q ss_pred EEEeccCCCC----HHHHHHHHHHHHHHHHH
Q psy6547 234 IRLSPALNIT----EQELREGLDIIINTINT 260 (266)
Q Consensus 234 iR~~~~~~~t----~~~i~~~~~~l~~~~~~ 260 (266)
+|++++..+| ++++++++++|.++++.
T Consensus 400 iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 400 LRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 9999886556 99999999999998876
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.67 E-value=4.6e-15 Score=132.30 Aligned_cols=234 Identities=11% Similarity=0.089 Sum_probs=148.2
Q ss_pred CCCceeecCC-----CHHHHHHHHhcCC----CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 17 MPGYNIIPYN-----DVDALEAKLKSNP----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 17 ~~~v~~~~~~-----d~~~l~~~l~~~~----~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+.+++.+|.+ |+++|+++|+++. .+.+++++...+++|.+- ++++|+++|++||+++++|++|.+..
T Consensus 209 g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id----~l~~I~~la~~~~~~lhvDaA~g~~~ 284 (481)
T 4e1o_A 209 LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFD----CLSELGPICAREGLWLHIDAAYAGTA 284 (481)
T ss_dssp TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHHHTCEEEEECTTGGGG
T ss_pred CCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcC----CHHHHHHHHHHcCCeEEeehhhHHHH
Confidence 4567777754 8999999996531 266677777777788774 89999999999999999999996542
Q ss_pred CcCcccccccCCC-CcCeee--ecccccCCchhhhhheecH-Hhhh-ccCCC---CC----CC-------CC-CCcHHHH
Q psy6547 88 RTGKLLAIHYEDV-RPDIVI--LGKALSGGLYPISAVLADD-EVMG-TLVPG---TH----GS-------TY-GGNPLAC 147 (266)
Q Consensus 88 ~~g~~~~~~~~~~-~~d~~~--~sK~~~~g~~~~g~~~~~~-~~~~-~~~~~---~~----~~-------~~-~~~~~~~ 147 (266)
..+..+.....++ ..|.++ .+|++++. ...|+++.+. ..+. .+... .. .. +. .+.+...
T Consensus 285 ~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~ 363 (481)
T 4e1o_A 285 FLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRS 363 (481)
T ss_dssp GGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTH
T ss_pred HhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccH
Confidence 2222222112233 246555 67999866 5667666644 3332 22110 00 00 00 1111122
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 148 KLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 148 ~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
.....+++.+.. +++.++..++++++++.|++ ++. ..+. ..... ++.|.+... .....++.++|.++|
T Consensus 364 l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~~---~~~~~---~v~f~~~~~-~~~~~~l~~~L~~~g 435 (481)
T 4e1o_A 364 VKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN-DPSFEIPA---KRHLG---LVVFRLKGP-NSLTENVLKEIAKAG 435 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTEECCS---CCCSS---EEEEEESSC-HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEec---CCcee---EEEEEeCCc-hHHHHHHHHHHHhCC
Confidence 233344444333 45677888899999999988 532 2221 12233 788887542 234678999999888
Q ss_pred cee-cc---CCCCEEEEecc-CCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 224 LVT-KP---ISNNIIRLSPA-LNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 224 i~~-~~---~~~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
+++ .+ .+..++|+++. ...|++|+++++++|+++++++.+
T Consensus 436 ~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 436 RLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp SSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 543 33 24568999965 445899999999999999887654
No 214
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.67 E-value=8.8e-16 Score=134.87 Aligned_cols=220 Identities=17% Similarity=0.112 Sum_probs=139.3
Q ss_pred CCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc
Q psy6547 14 GPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL 93 (266)
Q Consensus 14 ~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~ 93 (266)
..++.+++.++.+|+++|++++ .+++++|++++++|++|.+. ++++|+++|+++|+++|+|++|+.. ...
T Consensus 143 ~~~G~~~~~v~~~d~~~l~~ai--~~~t~~v~~e~p~NptG~~~----dl~~i~~la~~~g~~livD~a~~~~----~~~ 212 (430)
T 3ri6_A 143 PSFGIEVRFVDVMDSLAVEHAC--DETTKLLFLETISNPQLQVA----DLEALSKVVHAKGIPLVVDTTMTPP----YLL 212 (430)
T ss_dssp HHTTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCC----CHHHHHHHHHTTTCCEEEECTTSCT----TTC
T ss_pred HHcCCEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCCeec----CHHHHHHHHHHcCCEEEEECCCccc----ccC
Confidence 4567889999999999999999 45799999999999999886 7999999999999999999999522 112
Q ss_pred ccccCCCCcCeeeecccccCCchhhhh-hee--cHHh------------------hhccCC-CCCCCCCCCcHHHHHHHH
Q psy6547 94 AIHYEDVRPDIVILGKALSGGLYPISA-VLA--DDEV------------------MGTLVP-GTHGSTYGGNPLACKLAM 151 (266)
Q Consensus 94 ~~~~~~~~~d~~~~sK~~~~g~~~~g~-~~~--~~~~------------------~~~~~~-~~~~~~~~~~~~~~~a~~ 151 (266)
....+|.+..+.+++|+++|+-..+|. ++. +..+ .+.+.. .........++..+..+.
T Consensus 213 ~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l 292 (430)
T 3ri6_A 213 EAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQS 292 (430)
T ss_dssp CGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred ChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 222345666666799999853133444 442 2111 111110 001111234566665555
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEe------------------cCccceeeEEEEeeCccchHH
Q psy6547 152 TALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSS------------------GGLKKSINTLILSVSAILEVY 213 (266)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~~~~~~ 213 (266)
..++.+. ...++..+++..+.+.|++ .+ .+.. +.- .|. +++|+++. ..++.
T Consensus 293 ~~l~~l~--~r~~~~~~na~~la~~L~~-~p--~v~~-V~~P~l~~~p~~~~~~~~~g~Gg~---~lsf~l~~--~~~~~ 361 (430)
T 3ri6_A 293 LGLETMA--LRIERSCQNAQELAHWLLS-IP--QVKC-VNHPSLPDSPFYAIAKRQFRYAGS---ILTFELES--KEASY 361 (430)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHTT-CT--TCEE-EECTTSTTSTTHHHHHHHCSSCCS---EEEEECSS--HHHHH
T ss_pred hhhhhHH--HHHHHHHHHHHHHHHHHhC-CC--CccE-EECCCCCCCccHHHHHHhCCCCce---EEEEEECC--HHHHH
Confidence 5555432 2345556777777777776 32 1211 111 233 79999975 55677
Q ss_pred HHHHHHHHCCceeccC---------------------------CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 214 DVCIKMKDAGLVTKPI---------------------------SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 214 ~~~~~l~~~gi~~~~~---------------------------~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
+|.+.|.-.++.+.++ ..+.||+|+.. |+.+.+++.|++++
T Consensus 362 ~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~----E~~~dl~~dl~~al 429 (430)
T 3ri6_A 362 RFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI----EEIEDLKEDILQAL 429 (430)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred HHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 8888876555443322 24789999554 45566666666654
No 215
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.66 E-value=3.2e-15 Score=133.42 Aligned_cols=233 Identities=12% Similarity=0.019 Sum_probs=146.1
Q ss_pred CCCCceeecCC-----CHHHHHHHHhcCC----CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 16 HMPGYNIIPYN-----DVDALEAKLKSNP----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 16 ~~~~v~~~~~~-----d~~~l~~~l~~~~----~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
++.+++.+|.+ |+++|+++++++. .+.+|+++..++++|.+- ++++|.++|++||+++++|++|.++
T Consensus 202 ~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~----~l~~I~~la~~~~~~lhvD~a~g~~ 277 (486)
T 1js3_A 202 GGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFD----NLLEVGPICHEEDIWLHVDAAYAGS 277 (486)
T ss_dssp HTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred CCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC----CHHHHHHHHHHcCCEEEEehhhHHH
Confidence 35567778753 7999999995421 124677776777888774 9999999999999999999999654
Q ss_pred CCcCcccccccCCC-CcCeee--ecccccCCchhhhhheecHH-h-hhccCC---CCCC-----------------CCCC
Q psy6547 87 GRTGKLLAIHYEDV-RPDIVI--LGKALSGGLYPISAVLADDE-V-MGTLVP---GTHG-----------------STYG 141 (266)
Q Consensus 87 ~~~g~~~~~~~~~~-~~d~~~--~sK~~~~g~~~~g~~~~~~~-~-~~~~~~---~~~~-----------------~~~~ 141 (266)
......+.....++ ..|.++ .+|+++++ ++.|+++.+.+ . .+.+.. +... .+..
T Consensus 278 ~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr 356 (486)
T 1js3_A 278 AFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRR 356 (486)
T ss_dssp GGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCC
T ss_pred HHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCc
Confidence 21111111101121 345555 67999977 78999888644 2 344421 1100 0001
Q ss_pred CcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHH
Q psy6547 142 GNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCI 217 (266)
Q Consensus 142 ~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (266)
...+.+. .+++.+.. +++.++..++++++.+.|++ ++. ..+. ...+. ++.|.+... .....++.+
T Consensus 357 ~~~~~~~---~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~---~~~~~---~v~f~~~~~-~~~~~~l~~ 425 (486)
T 1js3_A 357 FRSLKMW---FVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQ-DPRFEVCA---EVTLG---LVCFRLKGS-DGLNEALLE 425 (486)
T ss_dssp CTHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CTTEEECS---CCCSS---EEEEEESSC-HHHHHHHHH
T ss_pred hhHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeC---CCcee---EEEEEecCh-HHHHHHHHH
Confidence 1233333 34443333 34667778888899998887 422 1111 12244 677766531 112578999
Q ss_pred HHHHCCceecc----CCCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 218 KMKDAGLVTKP----ISNNIIRLSP-ALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 218 ~l~~~gi~~~~----~~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
+|.++|+++.. .+.+++|+++ +...|++++++++++|+++++++..+
T Consensus 426 ~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 426 RINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp HHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99988876432 2457899995 45579999999999999998876543
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.66 E-value=5.5e-15 Score=128.14 Aligned_cols=218 Identities=11% Similarity=0.106 Sum_probs=143.0
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
.+.+++.++.+ |+++|++++ .+++++|++.+. +|.. .++++|.++|++||+++|+||+|+..
T Consensus 100 ~g~~~~~~~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~---~g~~----~~~~~i~~l~~~~~~~li~D~a~~~g--- 167 (390)
T 3b8x_A 100 YGLRVKFVDIDINTLNIDIESLKEAV--TDSTKAILTVNL---LGNP----NNFDEINKIIGGRDIILLEDNCESMG--- 167 (390)
T ss_dssp TTCEEEEECBCTTTCSBCHHHHHHHC--CTTEEEEEEECG---GGCC----CCHHHHHHHHTTSCCEEEEECTTCTT---
T ss_pred cCCEEEEEecCccccCcCHHHHHHHh--CcCCeEEEEECC---ccCh----hhHHHHHHHHHHcCCEEEEECcCccc---
Confidence 45567777654 799999999 346888887532 2333 38999999999999999999999621
Q ss_pred CcccccccCCCCcCeeeeccccc----CCchhhhhheecH-Hhhhcc---CCCC--------------------------
Q psy6547 90 GKLLAIHYEDVRPDIVILGKALS----GGLYPISAVLADD-EVMGTL---VPGT-------------------------- 135 (266)
Q Consensus 90 g~~~~~~~~~~~~d~~~~sK~~~----~g~~~~g~~~~~~-~~~~~~---~~~~-------------------------- 135 (266)
..+....++..+++.++||..+ +| +.|++++++ ++.+.+ ....
T Consensus 168 -~~~~~~~~g~~~~~~~~s~~~~k~~~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
T 3b8x_A 168 -ATFNNKCAGTFGLMGTFSSFYSNHIATM--EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKF 244 (390)
T ss_dssp -CEETTEETTSSSSEEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCB
T ss_pred -CEECCcccccccceEEEEccCCCCCccC--CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccce
Confidence 1112234566778888886544 33 347777765 443322 2110
Q ss_pred --CCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchH
Q psy6547 136 --HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEV 212 (266)
Q Consensus 136 --~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (266)
.+.++..+++.++++...++.++ +..++.+++.+++.+.|++ +.. ............ .+++.++...+.+.
T Consensus 245 ~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~ 318 (390)
T 3b8x_A 245 VLPGYNVRPLEMSGAIGIEQLKKLP--RFISVRRKNAEYFLDKFKD-HPYLDVQQETGESSWF---GFSFIIKKDSGVIR 318 (390)
T ss_dssp CSCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTT-CSSEEECCCCSBCCCC---EEEEEECTTSCCCH
T ss_pred eccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcC-CCCcccCCCCCCcccE---EEEEEecCcCcccH
Confidence 11223367788777777776553 5778888899999999987 432 111110011112 35555552113467
Q ss_pred HHHHHHHHHCCceeccC-------C-C---------------------CEEEEeccCCCCHHHHHHHHHHH
Q psy6547 213 YDVCIKMKDAGLVTKPI-------S-N---------------------NIIRLSPALNITEQELREGLDII 254 (266)
Q Consensus 213 ~~~~~~l~~~gi~~~~~-------~-~---------------------~~iR~~~~~~~t~~~i~~~~~~l 254 (266)
+++.+.|.++||.+++. . + +.+|++++..+|++|++++++.|
T Consensus 319 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 319 KQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 88999999999988752 1 1 25999999999999999999876
No 217
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.66 E-value=6.3e-15 Score=129.81 Aligned_cols=222 Identities=15% Similarity=0.117 Sum_probs=141.3
Q ss_pred CCCCceeecCC------CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcCC
Q psy6547 16 HMPGYNIIPYN------DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGR 88 (266)
Q Consensus 16 ~~~~v~~~~~~------d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~~ 88 (266)
.+.+++.++.+ |+++|++.+ .+++++|++.+. +|.. .++++|.++|+++|+++|+||+|+ +...
T Consensus 130 ~g~~~~~v~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~---~g~~----~~~~~i~~l~~~~~~~li~D~a~~~g~~~ 200 (437)
T 3bb8_A 130 NGLIPVFVDVDIPTYNVNASLIEAAV--SDKTKAIMIAHT---LGNL----FDLAEVRRVADKYNLWLIEDCCDALGSTY 200 (437)
T ss_dssp TTCEEEECCEETTTTEECGGGHHHHC--CTTEEEEEEECG---GGCC----CCHHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred cCCEEEEEeccCccCCcCHHHHHHhc--CCCCeEEEEeCC---CCCh----hcHHHHHHHHHHcCCEEEEECccccCceE
Confidence 45566776653 789999999 446888887542 2222 389999999999999999999996 2211
Q ss_pred cCcccccccCCCCcCeee--ec--ccccCCchhhhhheecHHhhhcc----CCCC-------------------------
Q psy6547 89 TGKLLAIHYEDVRPDIVI--LG--KALSGGLYPISAVLADDEVMGTL----VPGT------------------------- 135 (266)
Q Consensus 89 ~g~~~~~~~~~~~~d~~~--~s--K~~~~g~~~~g~~~~~~~~~~~~----~~~~------------------------- 135 (266)
.+ ...+..+|+++ |+ |.+ +| .++|+++++++.+..+ ....
T Consensus 201 ~~-----~~~~~~~d~~~~s~~~~k~l-~~-g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T 3bb8_A 201 DG-----KMAGTFGDIGTVSFYPAKHI-TM-GEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLP 273 (437)
T ss_dssp TT-----EETTSSSSEEEEECSTTSSS-CC-SSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCC
T ss_pred CC-----eecccccCEEEEECcCCcCC-CC-CCeEEEEeCCHHHHHHHHHHHHhCccccccccccccccccccccccccc
Confidence 11 22333356654 44 555 44 4688888875443221 1000
Q ss_pred -----------CCCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccccc-CCCcccE--EecC-ccceee
Q psy6547 136 -----------HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELSSPANK-SKASFKL--SSGG-LKKSIN 200 (266)
Q Consensus 136 -----------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~--~~~g-~~~~~~ 200 (266)
...++..+++.++++.++++.+ ++..++.+++.+++++.|++ +.. ..++... ...+ . .+
T Consensus 274 ~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~---~~ 347 (437)
T 3bb8_A 274 FGYDHKYTYSHLGYNLKITDMQAACGLAQLERI--EEFVEKRKANFKYLKDALQS-CADFIELPEATENSDPSWF---GF 347 (437)
T ss_dssp TTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGG-GTTTEECCCCCTTEECCCS---SE
T ss_pred ccccccccccccCcccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhc-cCCccccCCCCCCCceeeE---EE
Confidence 1112234677777777777654 44566668888999999988 521 1121100 1111 1 23
Q ss_pred EEEEeeCccchHHHHHHHHHHCCceeccCCC----------------------------CEEEEeccCCCCHHHHHHHHH
Q psy6547 201 TLILSVSAILEVYDVCIKMKDAGLVTKPISN----------------------------NIIRLSPALNITEQELREGLD 252 (266)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~----------------------------~~iR~~~~~~~t~~~i~~~~~ 252 (266)
.+.+....+.+..++.+.|.++||.++++.. +.+|++++..+|++|++++++
T Consensus 348 ~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~ 427 (437)
T 3bb8_A 348 PITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVS 427 (437)
T ss_dssp EEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHH
T ss_pred EEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHH
Confidence 3333321134678999999999999875421 149999999999999999999
Q ss_pred HHHHHHH
Q psy6547 253 IIINTIN 259 (266)
Q Consensus 253 ~l~~~~~ 259 (266)
.|.++++
T Consensus 428 ~l~~~~~ 434 (437)
T 3bb8_A 428 KFEEFFG 434 (437)
T ss_dssp HHHHHTT
T ss_pred HHHHHHc
Confidence 9988764
No 218
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.66 E-value=2.9e-15 Score=133.41 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=149.2
Q ss_pred CCCCceeecCC----CHHHHHHHHhcCC----CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 16 HMPGYNIIPYN----DVDALEAKLKSNP----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 16 ~~~~v~~~~~~----d~~~l~~~l~~~~----~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.+++.+|.+ |+++|+++|+++. .+.+++++...+++|.+. ++++|.++|++||+++++|++|.+..
T Consensus 202 ~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~----~l~~I~~la~~~~~~lhvD~A~~~~~ 277 (475)
T 3k40_A 202 GGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFD----YLDECGPVGNKHNLWIHVDAAYAGSA 277 (475)
T ss_dssp HTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC----CHHHHHHHHHHTTCEEEEECTTGGGG
T ss_pred cCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcC----CHHHHHHHHHHhCCeEEEeHHhHHHH
Confidence 35577788774 8999999996531 256677777777788875 99999999999999999999996532
Q ss_pred CcCcccccccCCC-CcCeee--ecccccCCchhhhhheecHH-hh-hccCC---CCCCC---------CC---CCcHHHH
Q psy6547 88 RTGKLLAIHYEDV-RPDIVI--LGKALSGGLYPISAVLADDE-VM-GTLVP---GTHGS---------TY---GGNPLAC 147 (266)
Q Consensus 88 ~~g~~~~~~~~~~-~~d~~~--~sK~~~~g~~~~g~~~~~~~-~~-~~~~~---~~~~~---------~~---~~~~~~~ 147 (266)
..+..+.....++ ..|.++ .+|+++++ ...|+++.+.+ .+ +.+.. +.... .+ .+-+...
T Consensus 278 ~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~ 356 (475)
T 3k40_A 278 FICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRA 356 (475)
T ss_dssp GGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC---------------------------CCCGGGTH
T ss_pred HhCHhhHHHhcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccH
Confidence 2222111111232 346655 57999876 66777776543 32 22210 10000 00 1111223
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 148 KLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 148 ~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
.....+++.+.. +++.++..++++++++.|++ ++. ..+. +.... ++.|.+... .....++.++|.++|
T Consensus 357 l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~l~~---~~~~~---iv~f~~~~~-~~~~~~l~~~L~~~g 428 (475)
T 3k40_A 357 LKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVA-DSRFELAA---EINMG---LVCFRLKGS-NERNEALLKRINGRG 428 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTEEESS---CCBTT---EEEEEESSC-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEec---CCceE---EEEEEeCCc-hHHHHHHHHHHHhCC
Confidence 334445554444 45677888899999999987 432 2221 12233 778877542 234688999999887
Q ss_pred ceec-c---CCCCEEEEecc-CCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 224 LVTK-P---ISNNIIRLSPA-LNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 224 i~~~-~---~~~~~iR~~~~-~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
.+.. + .+..++|+++. ...|++|+++++++|+++++++.++
T Consensus 429 ~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~~ 474 (475)
T 3k40_A 429 HIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQE 474 (475)
T ss_dssp SCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 7543 2 24578999965 4458999999999999999887654
No 219
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.65 E-value=5e-17 Score=142.91 Aligned_cols=216 Identities=13% Similarity=0.016 Sum_probs=145.2
Q ss_pred CCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccc
Q psy6547 17 MPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 96 (266)
Q Consensus 17 ~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~ 96 (266)
+.+++.+.. |+++|++.+ .+++++++++.++|++|.+ ++ +. ++ ++..+.|+++.+ .......+.
T Consensus 176 g~~~~~~~~-d~~~l~~~~--~~~~k~v~l~~p~NPtG~~-~~-~~-------l~--~~~~i~d~~~~~--~~~s~~~~~ 239 (427)
T 2hox_A 176 DKKGYVWAG-NAANYVNVS--NPEQYIEMVTSPNNPEGLL-RH-AV-------IK--GCKSIYDMVYYW--PHYTPIKYK 239 (427)
T ss_dssp CBTTEEEEE-EGGGGTTCS--CGGGEEEEEESSCTTTCCC-CC-CS-------ST--TCEEEEECTTCS--TTTSCCCSC
T ss_pred CCeeeeecC-CHHHHHHhh--cCCceEEEEcCCCCCcccc-cH-HH-------Hc--CCCEEEeecccC--CCCCccccC
Confidence 444444432 677887777 3357888887788888987 55 32 22 566788887742 111111111
Q ss_pred cCCCCcCeeeeccccc-CCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHh---------hc----c
Q psy6547 97 YEDVRPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---------EE----N 161 (266)
Q Consensus 97 ~~~~~~d~~~~sK~~~-~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~~----~ 161 (266)
.+.+..+.+|||.++ +| +|+||+++ ++++.+.+........++.+.+++.++..+|+... .+ .
T Consensus 240 -~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~ 317 (427)
T 2hox_A 240 -ADEDILLFTMSKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTF 317 (427)
T ss_dssp -BCCSEEEEEHHHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHH
T ss_pred -CCceEEEEeChhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHH
Confidence 344555666999998 88 99999999 58888777654444456678888888888887532 11 2
Q ss_pred HHHHHHHHHHHHHHHhhccc-ccCC-----------CcccEEecCccceeeEEEEeeCccchHHHHHHHHH-HCCceecc
Q psy6547 162 MIENAYKMGEIFRSELSSPA-NKSK-----------ASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMK-DAGLVTKP 228 (266)
Q Consensus 162 ~~~~~~~~~~~l~~~l~~~~-~~~~-----------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~ 228 (266)
.+++++++++++.+.|++ + +... +....+..|+ |+|+.++. +..+++++|+ ++||.++|
T Consensus 318 ~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~~~~~~~~~~~~p~~g~---f~~~~~~~----~~~~~~~~ll~~~gI~v~p 389 (427)
T 2hox_A 318 GFKKLRERWVNITALLDQ-SDRFSYQELPQSEYCNYFRRMRPPSPS---YAWVKCEW----EEDKDCYQTFQNGRINTQN 389 (427)
T ss_dssp HHHHHHHHHHHHHHHHTT-SSSEECCCCCSCEEETTTTEEECCCCS---EEEEEECS----GGGCSHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHh-CcCccccccccccccccccccCCCCce---EEEEECCC----cHHHHHHHHHHHCCEEEcC
Confidence 456777888888888887 4 2111 1111223477 88988875 3456777775 88999987
Q ss_pred C-----CCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 229 I-----SNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 229 ~-----~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
+ +.+++|+++. .+++++++++++|.+++++
T Consensus 390 g~~f~~~~~~~Ris~~--~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 390 GVGFEASSRYVRLSLI--KTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp GGGGTSCTTEEEEECS--SCHHHHHHHHHHHHHHHTC
T ss_pred CCccCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhh
Confidence 5 2689999955 5999999999999988743
No 220
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.65 E-value=2.7e-15 Score=134.73 Aligned_cols=233 Identities=12% Similarity=0.050 Sum_probs=144.8
Q ss_pred CceeecCC-----CHHHHHHHHhcCC----CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 19 GYNIIPYN-----DVDALEAKLKSNP----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 19 ~v~~~~~~-----d~~~l~~~l~~~~----~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+++.++.+ |+++|+++|+++. .+++|+++..++++|.+- ++++|.++|++||+++++|++|.+....
T Consensus 218 ~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd----~l~~I~~ia~~~~~~lhvD~a~~~~~~~ 293 (511)
T 3vp6_A 218 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD----PIQEIADICEKYNLWLHVDAAWGGGLLM 293 (511)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC----CHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccc----cHHHHHHHHHHcCCEEEEEccchhhHhh
Confidence 67788765 8999999996531 378888988898899874 9999999999999999999999653221
Q ss_pred CcccccccCCC-CcCeee--ecccccCCchhhhhheecH-Hhhhcc-C---CCCCCC-------------CC-CCcHHHH
Q psy6547 90 GKLLAIHYEDV-RPDIVI--LGKALSGGLYPISAVLADD-EVMGTL-V---PGTHGS-------------TY-GGNPLAC 147 (266)
Q Consensus 90 g~~~~~~~~~~-~~d~~~--~sK~~~~g~~~~g~~~~~~-~~~~~~-~---~~~~~~-------------~~-~~~~~~~ 147 (266)
...+.....|+ ..|.++ .+|+++++ ...|+++.+. .+.+.. . .+.... +. .+.+..+
T Consensus 294 ~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~a 372 (511)
T 3vp6_A 294 SRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDI 372 (511)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCH
T ss_pred ChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHH
Confidence 22111222232 345555 77999866 5677776644 344332 1 111000 00 0111123
Q ss_pred HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCc--------------c
Q psy6547 148 KLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSA--------------I 209 (266)
Q Consensus 148 ~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~--------------~ 209 (266)
..+..+++.+.. +++.++..++.+++++.|++ ... ..+.. ...... ++.|.+.... .
T Consensus 373 l~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~-~pg~~l~~~-~~p~~~---~v~f~~~p~~~~~~~~~~~~~~~l~ 447 (511)
T 3vp6_A 373 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN-REEFEMVFN-GEPEHT---NVCFWYIPQSLRGVPDSPQRREKLH 447 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTEEESSS-SCCSSS---CEEEEECCGGGSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEec-CCCCeE---EEEEEEeCccccccccchhHHHHHH
Confidence 333444444443 45778888899999999987 422 22210 012222 5565543211 0
Q ss_pred chHHHHHHHHHHCCceecc-----CCCCEEEEec-cCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 210 LEVYDVCIKMKDAGLVTKP-----ISNNIIRLSP-ALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 210 ~~~~~~~~~l~~~gi~~~~-----~~~~~iR~~~-~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
....++.++|.++|+++.. .+.+++|+++ +...+++|++++++.|++.-+.+
T Consensus 448 ~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 448 KVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1145788999999875432 1235799998 68889999999999999876554
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.64 E-value=2.6e-15 Score=133.53 Aligned_cols=217 Identities=14% Similarity=0.108 Sum_probs=141.1
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CcCCcCcc-cccccCCCCcC
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKL-LAIHYEDVRPD 103 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~-~~~~~g~~-~~~~~~~~~~d 103 (266)
.|+++|++++++. ++++|+++...+ |... ++++|+++|++||+++++|++|. |+...|.. ..+ .+.+.-
T Consensus 190 iD~d~le~~l~~~-~~klIi~~~s~~--~~~~----dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~--~~aDiv 260 (490)
T 2a7v_A 190 IDYNQLALTARLF-RPRLIIAGTSAY--ARLI----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF--KHADIV 260 (490)
T ss_dssp BCHHHHHHHHHHH-CCSEEEECCSSC--CSCC----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG--GTCSEE
T ss_pred cCHHHHHHHHhhc-CCcEEEEcCCCC--CCcc----cHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC--CCCCEE
Confidence 4899999999543 357777764433 2332 69999999999999999999983 32112221 112 133444
Q ss_pred eeeecccccCCchhhhhheecHHh---------------hhccCCC-CCCCCCCCcHHHHHHHHHHHHHHhh---ccHHH
Q psy6547 104 IVILGKALSGGLYPISAVLADDEV---------------MGTLVPG-THGSTYGGNPLACKLAMTALDVILE---ENMIE 164 (266)
Q Consensus 104 ~~~~sK~~~~g~~~~g~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~ 164 (266)
+.+++|+|+| .+.|++++++++ .+.++.. ......+++...+++...++..... +++.+
T Consensus 261 ~~S~hK~l~G--p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~ 338 (490)
T 2a7v_A 261 TTTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp EEESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred EECCcccCcc--ccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 4458899964 567888887642 2222211 1111122344445555556665532 45788
Q ss_pred HHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceecc----C-----CCCEEE
Q psy6547 165 NAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKP----I-----SNNIIR 235 (266)
Q Consensus 165 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~----~-----~~~~iR 235 (266)
++.++++++++.|.+ .+...+. .+.+++++++.+... +.+..++.+.|.+.||.+.. + ..+.+|
T Consensus 339 ~~~~na~~L~~~L~~-~G~~v~~-----~~t~t~lv~vdl~~~-g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iR 411 (490)
T 2a7v_A 339 QVLKNARAMADALLE-RGYSLVS-----GGTDNHLVLVDLRPK-GLDGARAERVLELVSITANKNTCPGDRSAITPGGLR 411 (490)
T ss_dssp HHHHHHHHHHHHHHH-TTCEEGG-----GSCSSSEEEEECTTT-TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred HHHHHHHHHHHHHHH-cCcEEec-----CCCCCeEEEEEeCCC-CCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceE
Confidence 889999999999988 4432211 122344888887642 45678889999999999863 2 357899
Q ss_pred Eecc----CCCCHHHHHHHHHHHHHHHHH
Q psy6547 236 LSPA----LNITEQELREGLDIIINTINT 260 (266)
Q Consensus 236 ~~~~----~~~t~~~i~~~~~~l~~~~~~ 260 (266)
++.+ ..++++|++++++.|.++++.
T Consensus 412 ig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 412 LGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp EESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 9653 468999999999999998764
No 222
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.63 E-value=6.2e-15 Score=129.51 Aligned_cols=199 Identities=13% Similarity=0.116 Sum_probs=135.7
Q ss_pred cccCCCCCCceeecCC-----CHHHHHHHHhcCCCEEEEEEcc-ccCCCCcccCChHHHHHHHHHHHh--cCCEEEEecc
Q psy6547 11 NEFGPHMPGYNIIPYN-----DVDALEAKLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEV 82 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~-----d~~~l~~~l~~~~~~~~i~~~~-~~~~~g~~~~~~~~l~~l~~l~~~--~g~~li~De~ 82 (266)
..+..++.+++.++.+ |+++|++++ .+++++|++++ .+|++|. .++.+++++|+++|++ +|+++|+||+
T Consensus 133 ~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l--~~~tk~V~i~~sp~np~~~-~~~~~~l~~i~~la~~~~~~~~livDea 209 (431)
T 3ht4_A 133 GSFKEYNIGYNAVPLTEGGLVDFEAVAAAI--HSNTKMIGIQRSKGYATRP-SFTISQIKEMIAFVKEIKPDVVVFVDNC 209 (431)
T ss_dssp SCSGGGTCEEEECCBCTTSSBCHHHHHHHC--CTTEEEEEEECSCTTSSSC-CCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred chHHHcCCEEEEeCCCCCCCcCHHHHHhhc--CCCCeEEEEECCCCCCCCC-cCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 4456678899999984 999999999 45799999996 5555555 4889999999999999 9999999999
Q ss_pred ccCcCCcCcccccccCCCCcCeeeecccccCCc-hhhhhheecHHhhhccCCC----CCCCCCCCcHHHHHHHHHHHHHH
Q psy6547 83 QTGLGRTGKLLAIHYEDVRPDIVILGKALSGGL-YPISAVLADDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVI 157 (266)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~-~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~ 157 (266)
|+.+.....+. .++.+..+.+++|+++||+ .+.|++++++++.+.+... ..+.+.+++...+.++...++.+
T Consensus 210 ~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 286 (431)
T 3ht4_A 210 YGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLA 286 (431)
T ss_dssp TCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHH
T ss_pred ChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhH
Confidence 97664323322 2355555666999998641 3568899999888776431 11222222111123334444432
Q ss_pred hhccHHHHHHHHHHHHHHHhhcccccCCCc-ccEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 158 LEENMIENAYKMGEIFRSELSSPANKSKAS-FKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
+...++..+++.++.+.|++ ++....+ ...++.+. ++.+.+++ .....+|++.|.+..
T Consensus 287 --~~~~~~~~~~a~~l~~~L~~-~g~~v~p~~~~~~~~l---i~~i~l~~--~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 287 --PHVAGQALKGAIFTAAFLEK-LGMNTSPAWNAPRTDL---IQSVQFDD--KDRMIAFCQAIQYAS 345 (431)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH-HTCCEESCTTSCCSSS---CCEEECCC--HHHHHHHHHHHHHTS
T ss_pred --HHHHHHHHHHHHHHHHHHHh-CcCEecCCCCCCCccE---EEEEEeCC--HHHHHHHHHHHHhcC
Confidence 34567777888888888887 5542211 11334566 88888876 557888999999873
No 223
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.62 E-value=4.1e-15 Score=138.93 Aligned_cols=228 Identities=11% Similarity=0.034 Sum_probs=146.2
Q ss_pred CHHHHHHHHhcCCCEE--------EEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCccc-cccc
Q psy6547 27 DVDALEAKLKSNPNIC--------AFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHY 97 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~--------~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~-~~~~ 97 (266)
|+++|+++++++++++ +++++.. +++|.+. ++++|.++|++||+++++||+|++....+..+ ....
T Consensus 291 d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~----dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~ 365 (755)
T 2vyc_A 291 QPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY----NAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYA 365 (755)
T ss_dssp SHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE----CHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSS
T ss_pred CHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec----CHHHHHHHHHHcCCEEEEECcCchhcccCcccCCcch
Confidence 8999999997644333 5554443 4578876 89999999999999999999996431222111 0111
Q ss_pred -CC--CCc------CeeeecccccCCchhhhhheecHH--hh--hccCC-CCCCCCCCCcHHHHHHHHHHHHHHhhc---
Q psy6547 98 -ED--VRP------DIVILGKALSGGLYPISAVLADDE--VM--GTLVP-GTHGSTYGGNPLACKLAMTALDVILEE--- 160 (266)
Q Consensus 98 -~~--~~~------d~~~~sK~~~~g~~~~g~~~~~~~--~~--~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~--- 160 (266)
.+ .+. -+.+++|+++|. ...|++..+.+ .. ..+.. .....+.+++...+++..++++.+..+
T Consensus 366 ~~g~~aD~~~~~~iv~~S~hK~L~g~-~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~ 444 (755)
T 2vyc_A 366 MRGEPGDHNGPTVFATHSTHKLLNAL-SQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGL 444 (755)
T ss_dssp SCSCCCCCSSBEEEEEEETTTSSSCC-TTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHH
T ss_pred hcCCcCCccCCCeEEEECccccccCc-CCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHH
Confidence 23 222 344588998753 22455655433 11 11111 012334556777788888888876543
Q ss_pred cHHHHHHHHHHHHHHHhhccccc---------C-CCc-ccEEe-------------------------------------
Q psy6547 161 NMIENAYKMGEIFRSELSSPANK---------S-KAS-FKLSS------------------------------------- 192 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~---------~-~~~-~~~~~------------------------------------- 192 (266)
++++++.++.++++++|++ ++. . .+. ....+
T Consensus 445 ~~~~~~~~~a~~~r~~L~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 523 (755)
T 2vyc_A 445 SLTQEVIDEAVDFRQAMAR-LYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKD 523 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHh-ccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccc
Confidence 5788888888999988877 321 0 000 00000
Q ss_pred --cCc---cceeeEEEEeeCc--------cchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHH
Q psy6547 193 --GGL---KKSINTLILSVSA--------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTIN 259 (266)
Q Consensus 193 --~g~---~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~ 259 (266)
.|. +-..+.+.++..+ +.++.++.+.|.++||.+...+.+.+|++++..+|+++++++++.|.++.+
T Consensus 524 ~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 524 IPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp CCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHH
T ss_pred cCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 110 0014555554211 356688999999999999877789999999999999999999999998876
Q ss_pred HH
Q psy6547 260 TM 261 (266)
Q Consensus 260 ~~ 261 (266)
..
T Consensus 604 ~~ 605 (755)
T 2vyc_A 604 HY 605 (755)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.58 E-value=8.5e-14 Score=122.62 Aligned_cols=216 Identities=13% Similarity=0.108 Sum_probs=135.6
Q ss_pred CCCCceeecCC----CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecc-ccCcCCcC
Q psy6547 16 HMPGYNIIPYN----DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEV-QTGLGRTG 90 (266)
Q Consensus 16 ~~~~v~~~~~~----d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~-~~~~~~~g 90 (266)
.+.+++.++.. |+++ + ++++++|+++.+ |++|.+. ++++|.++|+++|+++++|-. ++ ++...
T Consensus 174 ~G~~v~~v~~~~~~~d~~~----i--~~~t~~v~i~~p-n~tG~~~----~l~~i~~la~~~g~~vivd~d~~a-~g~~~ 241 (438)
T 1wyu_A 174 VGAKLLTLPLEGGRTPLPE----V--GEEVGAVVVQNP-NFLGALE----DLGPFAEAAHGAGALFVAVADPLS-LGVLK 241 (438)
T ss_dssp TTCEEEEECCBTTBCCCCC----C--CTTEEEEEEESS-CTTSBCC----CHHHHHHHHHHTTCEEEEECCTTG-GGTBC
T ss_pred CCCEEEEEcCcCCccCHHH----h--CCCeEEEEEECC-CCCeEEe----cHHHHHHHHHHcCCEEEEEechhh-ccCcC
Confidence 45567777632 2333 5 457899998887 8899886 899999999999999996622 21 22111
Q ss_pred cccccccCCCCcCeeee-ccccc-----CCchhhhhheecHHhhhccCCCCC--------------------------CC
Q psy6547 91 KLLAIHYEDVRPDIVIL-GKALS-----GGLYPISAVLADDEVMGTLVPGTH--------------------------GS 138 (266)
Q Consensus 91 ~~~~~~~~~~~~d~~~~-sK~~~-----~g~~~~g~~~~~~~~~~~~~~~~~--------------------------~~ 138 (266)
.. ..+ .+|++++ +|.|+ +| .++|++++++++.+.+..... ..
T Consensus 242 ~~---~~~--g~D~~~~s~kk~~~~~~~~G-p~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~ 315 (438)
T 1wyu_A 242 PP---GAY--GADIAVGDGQSLGLPMGFGG-PHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA 315 (438)
T ss_dssp CH---HHH--TCSEEEEECTTTTCCCGGGC-SCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS
T ss_pred CC---ccC--CCCEEEECCcccCCCccCCC-CCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcc
Confidence 11 222 3667665 46543 45 478999999888776643210 11
Q ss_pred CCCC---cHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchH
Q psy6547 139 TYGG---NPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEV 212 (266)
Q Consensus 139 ~~~~---~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (266)
+... +.+...++...+..+.. +++.++++++++++.+.|++ +.. +.. ...... +..+.+.. +.+.
T Consensus 316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g--~~~-~~~~~~---~~~~~~~~--~~~~ 386 (438)
T 1wyu_A 316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLE-VPG--VRP-FTPKPF---FNEFALAL--PKDP 386 (438)
T ss_dssp SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-STT--CEE-CSCSSB---CSEEEEEC--SSCH
T ss_pred cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCC--eEE-CCCCCe---EEEEEEeC--CCCH
Confidence 2211 22222222222444433 34677888899999999988 521 211 101122 22233332 2367
Q ss_pred HHHHHHHHHCCcee--ccC---CCCEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy6547 213 YDVCIKMKDAGLVT--KPI---SNNIIRLSPALNITEQELREGLDIIINTI 258 (266)
Q Consensus 213 ~~~~~~l~~~gi~~--~~~---~~~~iR~~~~~~~t~~~i~~~~~~l~~~~ 258 (266)
.+++++|.++||.+ .++ ..+++|++++..+|++++++++++|++++
T Consensus 387 ~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 387 EAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 89999999999998 443 36899999998899999999999998764
No 225
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.58 E-value=4.3e-14 Score=131.14 Aligned_cols=228 Identities=9% Similarity=-0.070 Sum_probs=141.5
Q ss_pred CHHHH-----HHHHhcC-CC---E----EEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCc--
Q psy6547 27 DVDAL-----EAKLKSN-PN---I----CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-- 91 (266)
Q Consensus 27 d~~~l-----~~~l~~~-~~---~----~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~-- 91 (266)
|+++| +++++++ ++ + ++++++.. +++|.+. ++++|.++|++||+++++||+|++....+.
T Consensus 255 d~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~----dl~~I~~la~~~g~~livDeAh~~~~~f~~~~ 329 (730)
T 1c4k_A 255 YDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY----NAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMM 329 (730)
T ss_dssp CGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE----CHHHHHHHHGGGBSEEEEECTTCCGGGSSGGG
T ss_pred CHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec----CHHHHHHHHHHcCCeEEEEcccccccccCccc
Confidence 67777 8888543 11 3 66665543 3578876 899999999999999999999964211121
Q ss_pred ----ccccccCCCC----cCeeeecccccCCchhh-hhheecHHhhhc----cC-----C-CCCCCCCCCcHHHHHHHHH
Q psy6547 92 ----LLAIHYEDVR----PDIVILGKALSGGLYPI-SAVLADDEVMGT----LV-----P-GTHGSTYGGNPLACKLAMT 152 (266)
Q Consensus 92 ----~~~~~~~~~~----~d~~~~sK~~~~g~~~~-g~~~~~~~~~~~----~~-----~-~~~~~~~~~~~~~~~a~~~ 152 (266)
....+.++.+ .-+.+++|+++| ++. |++..+.+.+.. +. . .....+.+++...+++..+
T Consensus 330 ~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g--~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~a 407 (730)
T 1c4k_A 330 RNSSPLLIDDLGPEDPGIIVVQSVHKQQAG--FSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDV 407 (730)
T ss_dssp GGGCTTSCCCCCTTSCEEEEEECHHHHSSC--CTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHH
T ss_pred CCcCcccccccCCCCCCEEEEECCCCCCCC--CCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 1111122443 233448899875 334 455443332210 00 0 0122334566777777777
Q ss_pred HHHHHhh---ccHHHHHHHHHHHHHHHhhc-ccccCCCcccE--------------------------------E--ecC
Q psy6547 153 ALDVILE---ENMIENAYKMGEIFRSELSS-PANKSKASFKL--------------------------------S--SGG 194 (266)
Q Consensus 153 ~l~~~~~---~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~--------------------------------~--~~g 194 (266)
+++.+.. +++++++.++.+++++.|++ ..+...+.... . ..+
T Consensus 408 A~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 487 (730)
T 1c4k_A 408 NAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDN 487 (730)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTT
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCc
Confidence 7776654 34778888888889988876 11211111000 0 011
Q ss_pred c-c-ce-eeEEEEee---------CccchHHHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHH
Q psy6547 195 L-K-KS-INTLILSV---------SAILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 261 (266)
Q Consensus 195 ~-~-~~-~~~~~~~~---------~~~~~~~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~ 261 (266)
. + .| -+.+..+. ..+.++.++.+.|.++||.+...+...+|++++..+|+++++++++.|.++.+..
T Consensus 488 ~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 488 QYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp CEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 0 0 01 13444431 1145788999999999999998878999999999999999999999999987765
No 226
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.54 E-value=7.5e-14 Score=120.68 Aligned_cols=227 Identities=11% Similarity=0.103 Sum_probs=140.0
Q ss_pred CCCCCceeecCC------CHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 15 PHMPGYNIIPYN------DVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 15 ~~~~~v~~~~~~------d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
..+.+++.++.+ |++++++++++ ++++++|+.+ +++|... ++++|.++|+ ||+++|+|++|+ ++
T Consensus 97 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~---~~~G~~~----~~~~i~~la~-~~~~vi~D~a~a-~g 167 (377)
T 3ju7_A 97 WCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY---ATFGSWM----NLEEYEELEK-KGVPVVVDAAPG-FG 167 (377)
T ss_dssp HTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB---CGGGBCC----CCHHHHHHHH-TTCCBEEECTTC-TT
T ss_pred HcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE---CCCCCcc----CHHHHHHHHh-cCCEEEEECCCc-cC
Confidence 345666776643 89999998832 2238888743 2356554 6899999999 999999999995 32
Q ss_pred CcCcccccccC-CCCcCeeeec----ccccCCchhhhhhee-cHHhhhccCCC------------CCCCCCCCcHHHHHH
Q psy6547 88 RTGKLLAIHYE-DVRPDIVILG----KALSGGLYPISAVLA-DDEVMGTLVPG------------THGSTYGGNPLACKL 149 (266)
Q Consensus 88 ~~g~~~~~~~~-~~~~d~~~~s----K~~~~g~~~~g~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~a 149 (266)
..+..... +...|+.++| |.+++| ..|+++. ++++.+.++.. ..+..+..+.+.++.
T Consensus 168 ---~~~~~~~~g~~~~d~~~~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~ 242 (377)
T 3ju7_A 168 ---LMNGGMHYGQDFSGMIIYSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAI 242 (377)
T ss_dssp ---CEETTEETTTTCSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHH
T ss_pred ---CeECCEeccCCCCcEEEEECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHH
Confidence 11111112 1223555543 999875 3666665 45554443321 113345667777777
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccce-eeEEEEeeCccchHHHHHHHHHHCCceecc
Q psy6547 150 AMTALDVILEENMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKS-INTLILSVSAILEVYDVCIKMKDAGLVTKP 228 (266)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 228 (266)
+...++.+ +...++.+++.+++.+.|++ ++...............+ ++.+.+++ ..+.+++.+.|.++||.++.
T Consensus 243 ~~~~l~~l--~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~~~~ 317 (377)
T 3ju7_A 243 GIATMKKW--DDKLKERTRISEWYKQLLQS-NGLMKKGWQLQKTEAVIQQFMPILCPE--EVRNKQVIEDLKKQKIEARL 317 (377)
T ss_dssp HHHHHHTH--HHHHHHHHHHHHHHHHHHHH-TTTTTTTCBCCCCSCBCCSSEEEECCT--TSCHHHHHHHHHTTTBCCBC
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHhcC-CCCccccccCCCCCcceEEEEEEEeCC--hhhHHHHHHHHHHCCCceec
Confidence 76666543 44667778888888888887 542111110111110000 33444443 33588999999999998864
Q ss_pred CC-------------------------CCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 229 IS-------------------------NNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 229 ~~-------------------------~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
.. .+.+|+.++...|++|++++++.|.+++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 318 YFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp TTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred ccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 31 157999999999999999999999887654
No 227
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.53 E-value=4e-14 Score=123.95 Aligned_cols=197 Identities=10% Similarity=0.057 Sum_probs=128.7
Q ss_pred ccCCCCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEcc----ccCCCCcccCChHHHHHHHHHHHh--cCCEEEEe
Q psy6547 12 EFGPHMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIAD 80 (266)
Q Consensus 12 ~~~~~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~----~~~~~g~~~~~~~~l~~l~~l~~~--~g~~li~D 80 (266)
.+..++.+++.++. .|+++|++++++++++++|++++ ++|++|.+. ++++|+++|++ +|+++++|
T Consensus 143 ~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~----dl~~i~~la~~~~~g~~livD 218 (427)
T 3i16_A 143 SLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE----DIKSIVDCVKNIRKDIICFVD 218 (427)
T ss_dssp CTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH----HHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH----HHHHHHHHHHHhCCCCEEEEE
Confidence 34455778888887 58999999996435799999999 777777664 99999999999 99999999
Q ss_pred ccccCcCCcCcccccccCCCCcCeeeecccccCCc-hhhhhheecHHhhhccCCCCCCCCC--CCcH-HH-HHHHHHHHH
Q psy6547 81 EVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGL-YPISAVLADDEVMGTLVPGTHGSTY--GGNP-LA-CKLAMTALD 155 (266)
Q Consensus 81 e~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~-~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~a~~~~l~ 155 (266)
++|..+.....+. ..+.+..+.++||.++|+. .+.|++++++++++.+........+ ..++ +. +..+...++
T Consensus 219 ~a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~ 295 (427)
T 3i16_A 219 NCYGEFMDTKEPT---DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLF 295 (427)
T ss_dssp CTTTTTSSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH
T ss_pred CCCccccccCCcc---ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHH
Confidence 9996442112221 2344455556999999642 3468899999988877642111111 1111 21 223333333
Q ss_pred HHhhccHHHHHHHHHHHHHHHhhcccccCCCcc-cEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 156 VILEENMIENAYKMGEIFRSELSSPANKSKASF-KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
.. ....++..+++.++.+.|++ .+....+. ..+.... ++.|.+.+ .....+|++.|....
T Consensus 296 ~~--~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~~---i~~i~l~~--~~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 296 LA--PHISMEALKGAILCSRIMEL-AGFEVMPKYDEKRSDI---IQSIKFND--KDKLIEFCKGIQTGS 356 (427)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSS---CEEEECSS--HHHHHHHHHHHHHTC
T ss_pred HH--HHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCccE---EEEEEECC--HHHHHHHHHHHhhcC
Confidence 21 34567777788888888887 54311110 0112233 88888876 566888999999873
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.52 E-value=7.3e-14 Score=120.26 Aligned_cols=212 Identities=9% Similarity=0.000 Sum_probs=145.8
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeee
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL 107 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~ 107 (266)
+++++..+ ++++++|.+..+.+.+|.+. ++ +|+++|+++++|-+++ ++ ..++.++.++ ....+.
T Consensus 142 ~~~~~~~i--~~~t~lV~~~h~et~tG~~~----pi-----i~~~~~~~~~vD~~q~-~g--~~~id~~~~~--~~~~s~ 205 (377)
T 3e77_A 142 PDPSTWNL--NPDASYVYYCANETVHGVEF----DF-----IPDVKGAVLVCDMSSN-FL--SKPVDVSKFG--VIFAGA 205 (377)
T ss_dssp CCGGGCCC--CTTCSCEEEESEETTTTEEC----SS-----CCCCTTCCEEEECTTT-TT--SSCCCGGGCS--EEEEEG
T ss_pred CChHHhcc--CCCccEEEEeCccCchheEc----hh-----hhccCCCEEEEEcccc-cC--CCCCchhhcC--EEEEec
Confidence 45555445 56788888888888889885 33 4778999999999995 32 2334455555 334446
Q ss_pred cccccCCchhhhhheecHHhhhccCCC------------CCCCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q psy6547 108 GKALSGGLYPISAVLADDEVMGTLVPG------------THGSTYGGNPLACKLAMTALDVILEE----NMIENAYKMGE 171 (266)
Q Consensus 108 sK~~~~g~~~~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~~ 171 (266)
.|++| + ..+|++..++++.+.+.+. ......+++.....+...+++++.++ .+.++.+++.+
T Consensus 206 ~K~~g-p-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~ 283 (377)
T 3e77_A 206 QKNVG-S-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQ 283 (377)
T ss_dssp GGTTS-C-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccC-C-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 69996 3 4588888888876555421 01123456666777788888887654 47788889999
Q ss_pred HHHHHhhccccc-CCCc-ccEEecCccceeeEEEEeeCcc-ch-HHHHHHHHHHCCceeccC--CCCEEEEeccCCCCHH
Q psy6547 172 IFRSELSSPANK-SKAS-FKLSSGGLKKSINTLILSVSAI-LE-VYDVCIKMKDAGLVTKPI--SNNIIRLSPALNITEQ 245 (266)
Q Consensus 172 ~l~~~l~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~gi~~~~~--~~~~iR~~~~~~~t~~ 245 (266)
++++.|++ ++. .... ......+. ++.|.++...+ .+ ...+...|.++||.++++ ..+.+|+|++..+|++
T Consensus 284 ~l~~~L~~-~~g~~~~~~~~~~rs~~---ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~e 359 (377)
T 3e77_A 284 TIYEIIDN-SQGFYVCPVEPQNRSKM---NIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIE 359 (377)
T ss_dssp HHHHHHHT-STTSEECCSCGGGBCSS---EEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHH
T ss_pred HHHHHHHh-cCCceecCCCHHHcCCc---EEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHH
Confidence 99999998 532 1011 10112234 58888875221 11 146888888999998875 2367999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6547 246 ELREGLDIIINTINTM 261 (266)
Q Consensus 246 ~i~~~~~~l~~~~~~~ 261 (266)
|++++++.|++++++.
T Consensus 360 dId~l~~al~~~~~~~ 375 (377)
T 3e77_A 360 DVQKLAAFMKKFLEMH 375 (377)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999998764
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.52 E-value=3.5e-14 Score=122.84 Aligned_cols=211 Identities=12% Similarity=0.021 Sum_probs=142.5
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcc-cCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCee
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAV-VPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 105 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~-~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~ 105 (266)
++++++..+ ++++++|++..+.+.+|.+ . ++++|. +|+++++|-+++ ++ ..++.++.++ .++.
T Consensus 155 ~~~~~~~~l--~~~t~lV~~~h~et~tG~~i~----pi~~i~-----~g~~~~vDa~qs-~g--~~pidv~~~~--~~~~ 218 (386)
T 3qm2_A 155 VKPMREWQL--SDNAAYLHYCPNETIDGIAID----ETPDFG-----PEVVVTADFSST-IL--SAPLDVSRYG--VIYA 218 (386)
T ss_dssp ECCGGGCCC--CTTCSCEEECSEETTTTEECC----CCCCCC-----TTCCEEEECTTT-TT--SSCCCGGGCS--EEEE
T ss_pred CchHHHhhc--CCCCcEEEEECCcCCcCEecC----chhhhc-----CCCEEEEEcccc-cC--CCCCCccccC--EEEE
Confidence 356666666 5578899999888888985 4 455553 899999999994 32 1234455554 3455
Q ss_pred eecccccCCchhhhhheecHHhhhccCCCC------------CCCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHH
Q psy6547 106 ILGKALSGGLYPISAVLADDEVMGTLVPGT------------HGSTYGGNPLACKLAMTALDVILE----ENMIENAYKM 169 (266)
Q Consensus 106 ~~sK~~~~g~~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~ 169 (266)
+..|++| + ..+|++..++++.+.+.+.. .....+++..+..+...+++++.. ++..++.+++
T Consensus 219 s~hK~lG-P-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l 296 (386)
T 3qm2_A 219 GAQKNIG-P-AGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQK 296 (386)
T ss_dssp ETTTTTC-C-TTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ecccccC-C-CccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 5669996 3 45889999888766554310 011124455566677777777655 3477888899
Q ss_pred HHHHHHHhhccccc-CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--CCEEEEeccCCCCHHH
Q psy6547 170 GEIFRSELSSPANK-SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQE 246 (266)
Q Consensus 170 ~~~l~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~iR~~~~~~~t~~~ 246 (266)
.+++++.|++ ++. ..........+. ++.|.++.. +.+ .++...|.++||.++.+. .+.+|+|++..+|++|
T Consensus 297 ~~~l~~~l~~-~~~~~~~~~~~~rs~~---iv~f~~~~~-~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~ed 370 (386)
T 3qm2_A 297 AELLYGVIDN-SDFYRNDVAQANRSRM---NVPFQLADN-TLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEG 370 (386)
T ss_dssp HHHHHHHHHT-CSSEECCBCGGGBCSS---EEEEEESSG-GGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHH
T ss_pred HHHHHHHHHH-CCCcccCCCHHHcCce---EEEEECCCc-ccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHH
Confidence 9999999988 542 111110112234 788888741 344 678888999999987652 2569999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6547 247 LREGLDIIINTINTM 261 (266)
Q Consensus 247 i~~~~~~l~~~~~~~ 261 (266)
++++++.|+++.++.
T Consensus 371 Id~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 371 VKALTDFMIDFERRH 385 (386)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988763
No 230
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.51 E-value=1.6e-13 Score=119.66 Aligned_cols=196 Identities=11% Similarity=0.075 Sum_probs=130.0
Q ss_pred ccCCCCCCceeecC-----CCHHHHHHHHhcCCCEEEEEEcc----ccCCCCcccCChHHHHHHHHHHHh--cCCEEEEe
Q psy6547 12 EFGPHMPGYNIIPY-----NDVDALEAKLKSNPNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIAD 80 (266)
Q Consensus 12 ~~~~~~~~v~~~~~-----~d~~~l~~~l~~~~~~~~i~~~~----~~~~~g~~~~~~~~l~~l~~l~~~--~g~~li~D 80 (266)
.+..++.+++.++. .|++++++++ .+++++|++++ ++|++|.+. ++++|+++|++ +|+++++|
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai--~~~tklV~i~~s~g~p~nptg~v~----~l~~I~~la~~~~~~~~livD 201 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKM--TPKTKMIGIQRSRGYADRPSFTIE----KIKEMIVFVKNINPEVIVFVD 201 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHC--CTTEEEEEEECSCTTSSSCCCCHH----HHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhc--cCCCeEEEEECCCCCCCCCcCccc----cHHHHHHHHHhhCCCCEEEEe
Confidence 34456778888887 6999999999 45799999998 888888775 99999999999 99999999
Q ss_pred ccccCcCCcCcccccccCCCCcCeeeecccccCCch-hhhhheecHHhhhccCCCC----CCCCCCCcHHHHHHHHHHHH
Q psy6547 81 EVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLY-PISAVLADDEVMGTLVPGT----HGSTYGGNPLACKLAMTALD 155 (266)
Q Consensus 81 e~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~~-~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~ 155 (266)
|+|..+.....+ ...+.+.-+.+++|.++++.. ..|++++++++++.+.... .....++....+.++...++
T Consensus 202 ~a~~~~~~~~~p---~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~ 278 (409)
T 3jzl_A 202 NCYGEFVEYQEP---PEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF 278 (409)
T ss_dssp CTTCTTTSSCCS---GGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH
T ss_pred CCcccccccCCc---cccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHh
Confidence 999644211121 123444445559999996512 3588999999888775411 11122222211233444443
Q ss_pred HHhhccHHHHHHHHHHHHHHHhhcccccCCCcc-cEEecCccceeeEEEEeeCccchHHHHHHHHHHCCc
Q psy6547 156 VILEENMIENAYKMGEIFRSELSSPANKSKASF-KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGL 224 (266)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 224 (266)
.. +...++..+++.++.+.|++ ++....+. ..+.... ++.+.+++ .....+|++.|.+...
T Consensus 279 ~~--~~r~~~~~~~a~~la~~L~~-~g~~v~p~~~~~~~~~---i~~i~l~~--~~~~~~~~~~L~~~~~ 340 (409)
T 3jzl_A 279 LA--PHVTAQAIKGARFTAAMLAE-FGVEADPVWDAPRTDL---IQSVSFHN--KEKMVAFAQAIQAASP 340 (409)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSS---CCEEECSC--HHHHHHHHHHHHHTSS
T ss_pred hH--HHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCCCccE---EEEEEeCC--HHHHHHHHHHHHhcCc
Confidence 22 34567777888888888887 55311111 0122334 78888876 5678889999998743
No 231
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.51 E-value=7.3e-14 Score=122.30 Aligned_cols=197 Identities=11% Similarity=0.058 Sum_probs=128.8
Q ss_pred ccCCCCCCceeecC----CCHHHHHHHHhcCCCEEEEEEcc----ccCCCCcccCChHHHHHHHHHHHh--cCCEEEEec
Q psy6547 12 EFGPHMPGYNIIPY----NDVDALEAKLKSNPNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADE 81 (266)
Q Consensus 12 ~~~~~~~~v~~~~~----~d~~~l~~~l~~~~~~~~i~~~~----~~~~~g~~~~~~~~l~~l~~l~~~--~g~~li~De 81 (266)
.+..++.+++.++. .|++++++++++++++++|++++ ++|++|.+. ++++|+++|++ +|+++++|+
T Consensus 144 ~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~----dl~~i~~ia~~~~~g~~livD~ 219 (427)
T 3hvy_A 144 SLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIA----EIAEIIKSIREVNENVIVFVDN 219 (427)
T ss_dssp CTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHH----HHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHH----HHHHHHHHHHHhCCCCEEEEEC
Confidence 34446788888888 79999999996435799999999 677777664 99999999999 899999999
Q ss_pred cccCcCCcCcccccccCCCCcCeeeecccccCCc-hhhhhheecHHhhhccCCCC--CC--CCCCCcHHHHHHHHHHHHH
Q psy6547 82 VQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGL-YPISAVLADDEVMGTLVPGT--HG--STYGGNPLACKLAMTALDV 156 (266)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~d~~~~sK~~~~g~-~~~g~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~a~~~~l~~ 156 (266)
+|..+.....+. ..+.+..+.++||+++|+. .+.|++++++++.+.+.... .. ...+++...+..+...++.
T Consensus 220 a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~ 296 (427)
T 3hvy_A 220 CYGEFVEEKEPT---DVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM 296 (427)
T ss_dssp TTCTTTSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH
T ss_pred CccccccCCCCc---ccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH
Confidence 996442112221 2344555556999999641 24588999999888776421 11 1111111113333333332
Q ss_pred HhhccHHHHHHHHHHHHHHHhhcccccCCCcc-cEEecCccceeeEEEEeeCccchHHHHHHHHHHCC
Q psy6547 157 ILEENMIENAYKMGEIFRSELSSPANKSKASF-KLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAG 223 (266)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (266)
. +...++..+++.++.+.|++ .+....+. ..+.... ++.+.+.+ .....+|++.|....
T Consensus 297 ~--~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~l---i~~~~l~~--~~~~~~f~~~l~~~~ 356 (427)
T 3hvy_A 297 A--PHVTIEAVKGAVFCARIMEL-AGFDVLPKYNDKRTDI---IQAIKFND--EKKLIDFIKGIQTAS 356 (427)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSS---EEEEECSS--HHHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCceE---EEEEeCCC--HHHHHHHHHHhcccc
Confidence 2 34667777888888888887 54311111 0112233 78888875 556788999998763
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.43 E-value=1.2e-12 Score=112.30 Aligned_cols=200 Identities=10% Similarity=0.019 Sum_probs=137.0
Q ss_pred CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCCCcCeeee--cccccCCc
Q psy6547 38 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL--GKALSGGL 115 (266)
Q Consensus 38 ~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--sK~~~~g~ 115 (266)
.++++++.+..+.+.+|.+. +. +++ +|+++++|.+++ ++. .++.++ + .|++++ .|++| +
T Consensus 138 ~~~t~lv~~~~~e~~tG~~~-~~--------i~~-~~~~~~vD~~q~-~g~--~~id~~--~--~d~~~~s~~K~~g-p- 198 (361)
T 3m5u_A 138 SDNADYAYICSNNTIYGTQY-QN--------YPK-TKTPLIVDASSD-FFS--RKVDFS--N--IALFYGGVQKNAG-I- 198 (361)
T ss_dssp CTTSSEEEEESEETTTTEEC-SS--------CCC-CSSCEEEECGGG-TTS--SCCCCT--T--EEEEEEETTTTSS-C-
T ss_pred CCCCCEEEEeCCCCCcceeC-Cc--------ccc-cCCEEEEEcccc-cCC--CCCCcc--c--CCEEEEechhccC-C-
Confidence 45688888888877788873 21 333 499999999995 321 222332 2 355554 49996 3
Q ss_pred hhhhhheecHHhhhccCC----C---------CCCCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHhh
Q psy6547 116 YPISAVLADDEVMGTLVP----G---------THGSTYGGNPLACKLAMTALDVILEE----NMIENAYKMGEIFRSELS 178 (266)
Q Consensus 116 ~~~g~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~~~l~~~l~ 178 (266)
..+|++..++++.+.+.+ . ......+++..+..+..++++++.+. ...++.+++.+++++.|+
T Consensus 199 ~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~ 278 (361)
T 3m5u_A 199 SGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID 278 (361)
T ss_dssp TTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 458889998887755432 0 11122456777777888889888664 477888899999999998
Q ss_pred ccccc--CCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceeccCC--CCEEEEeccCCCCHHHHHHHHHHH
Q psy6547 179 SPANK--SKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDII 254 (266)
Q Consensus 179 ~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~iR~~~~~~~t~~~i~~~~~~l 254 (266)
+ ++. ............ ++.|.++...+.+ .++...|.++||.++.+. .+.+|+|++..+|++|++++++.|
T Consensus 279 ~-~~g~~~~~~~~~~rs~~---ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al 353 (361)
T 3m5u_A 279 L-SNGFYKGHADKKDRSLM---NVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFM 353 (361)
T ss_dssp T-STTSEEESSCGGGBCSS---EEEEEESSCTTHH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHH
T ss_pred H-CCCeeeccCCHHHcCCe---EEEEECCCchhhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHH
Confidence 8 652 111110112234 6888887411234 578889999999987652 256999999999999999999999
Q ss_pred HHHHHHH
Q psy6547 255 INTINTM 261 (266)
Q Consensus 255 ~~~~~~~ 261 (266)
+++.++.
T Consensus 354 ~~~~~~~ 360 (361)
T 3m5u_A 354 KEFQGKY 360 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988764
No 233
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.41 E-value=3.6e-12 Score=117.59 Aligned_cols=225 Identities=11% Similarity=0.001 Sum_probs=144.1
Q ss_pred CHHHHHHHHhcCCCEE---EEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccc-ccc--CCC
Q psy6547 27 DVDALEAKLKSNPNIC---AFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-IHY--EDV 100 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~---~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~-~~~--~~~ 100 (266)
|+++|+++++++++++ +++++.. |++|.+. ++++|.++|+.++ +++||+|++....+..+. ... .+.
T Consensus 281 d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~----dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~ 353 (715)
T 3n75_A 281 QHATIAKRVKETPNATWPVHAVITNS-TYDGLLY----NTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGR 353 (715)
T ss_dssp SHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEE----CHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSC
T ss_pred CHHHHHHHHhhCcCccCceEEEEECC-CCCCccC----CHHHHHHHhCcCc--EEEccccccccccCCccccccccccCc
Confidence 7999999998755444 4554444 7788886 8889999998764 799999964322222211 111 121
Q ss_pred CcCe-----eeecccccCCchhhhhheecHHhh-hccCC-CCCCCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q psy6547 101 RPDI-----VILGKALSGGLYPISAVLADDEVM-GTLVP-GTHGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMG 170 (266)
Q Consensus 101 ~~d~-----~~~sK~~~~g~~~~g~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~ 170 (266)
.+|+ .+++|++++- -..|++.++.++. +.+.. .....+.+++++.+++..++++.+.. +++++++.++.
T Consensus 354 ~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a 432 (715)
T 3n75_A 354 VEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERA 432 (715)
T ss_dssp CTTCEEEEEECHHHHSSCC-TTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecccccccCC-CCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 2453 4589998762 2356776654321 11111 12344556788889999999988763 45889999999
Q ss_pred HHHHHHhhccccc-------CCCccc------EEe--------------cCc---cceeeEEEEeeC--------ccchH
Q psy6547 171 EIFRSELSSPANK-------SKASFK------LSS--------------GGL---KKSINTLILSVS--------AILEV 212 (266)
Q Consensus 171 ~~l~~~l~~~~~~-------~~~~~~------~~~--------------~g~---~~~~~~~~~~~~--------~~~~~ 212 (266)
+++++.|++ +.. ..+... ... .+. +--=+.+.++.- .+..+
T Consensus 433 ~~~r~~L~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g 511 (715)
T 3n75_A 433 IKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPA 511 (715)
T ss_dssp HHHHHHHHH-HHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCH
T ss_pred HHHHHHHHH-hhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcH
Confidence 999999887 431 000000 000 000 000133333321 14567
Q ss_pred HHHHHHHHHCCceeccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHH
Q psy6547 213 YDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 260 (266)
Q Consensus 213 ~~~~~~l~~~gi~~~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~ 260 (266)
..+.+.|+++||.+.-.+...+-+-++...|+++++++++.|.++-+.
T Consensus 512 ~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 512 SIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp HHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 789999999999999888888888888899999999999999877553
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.41 E-value=5.2e-12 Score=109.52 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=134.4
Q ss_pred CHHHHHHHHhcCC--CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCC-CcC
Q psy6547 27 DVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPD 103 (266)
Q Consensus 27 d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~-~~d 103 (266)
|++++|++|++++ .+.+|+.++.++-++.+ +++++|+++|++||+++++||+|.........+....... ..|
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~----ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVP----DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC----CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccc----ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 7999999998753 45666665544433343 3999999999999999999999954322222222222222 267
Q ss_pred eeeec--ccccCCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHh
Q psy6547 104 IVILG--KALSGGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSEL 177 (266)
Q Consensus 104 ~~~~s--K~~~~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l 177 (266)
+++.| |.+-.. ++.+.+.. ++++++.+... .-.+-+++| ....+.++..+.. .++.++..++.++++++|
T Consensus 277 ~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~-yPGr~S~Sp--sldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L 352 (501)
T 3hl2_A 277 AFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKM-YPGRASASP--SLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI 352 (501)
T ss_dssp EEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHT-SCSCBCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccceee-cCceEEEeCCHHHHHHHHHh-CCCCCCCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66644 876533 22223323 55666554321 112222333 2223334444444 457777888999999999
Q ss_pred hccccc-CCCcccEEecCccceeeEEEEeeCc---cchHHHHHHHHHHCCcee----ccC--------------------
Q psy6547 178 SSPANK-SKASFKLSSGGLKKSINTLILSVSA---ILEVYDVCIKMKDAGLVT----KPI-------------------- 229 (266)
Q Consensus 178 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~----~~~-------------------- 229 (266)
++ +.. ..... .....+|. -+.+.+.... +.+...+...|..++|-. .++
T Consensus 353 ~~-la~~~ge~l-l~~~~n~i-s~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~ 429 (501)
T 3hl2_A 353 KK-LSEAYNERL-LHTPHNPI-SLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNY 429 (501)
T ss_dssp HH-HHHTTTCCB-CCCTTCSS-EEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCC
T ss_pred HH-HHHhcChhh-cCCCCCce-eEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCC
Confidence 98 543 11111 11111211 2444443211 224567778888886642 221
Q ss_pred CCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 230 SNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 230 ~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
...++-++....++++|+|.++++|++.+.+..++
T Consensus 430 ~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 430 PCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp SSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 12689999999999999999999999999887544
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.32 E-value=2.4e-11 Score=106.11 Aligned_cols=224 Identities=11% Similarity=0.097 Sum_probs=129.8
Q ss_pred CHHHHHHHHhcCC--CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcCCcCcccccccCCC-CcC
Q psy6547 27 DVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPD 103 (266)
Q Consensus 27 d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~g~~~~~~~~~~-~~d 103 (266)
|+++|+++|++++ .+.+|+++|.++.+|.+- ++++|+++|++||+++++|++|.+.......+....... ..|
T Consensus 183 d~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~d----dl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD 258 (450)
T 3bc8_A 183 DLKAVEAKIQELGPEHILCLHSTTACFAPRVPD----RLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRID 258 (450)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCC----CHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHhcCCCCEEEEEEECCcCCCceec----CHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCC
Confidence 8999999998754 566677776665555554 999999999999999999999965322222111111211 355
Q ss_pred eee--ecccccCCchhhhhhee-cHHhhhccCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHh
Q psy6547 104 IVI--LGKALSGGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEEN---MIENAYKMGEIFRSEL 177 (266)
Q Consensus 104 ~~~--~sK~~~~g~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~l 177 (266)
.++ ..|++... ...+++.. +++..+.+..... ..-+.+| ++. ....+..+..++ +.++..++.+++++++
T Consensus 259 ~~v~S~HK~l~a~-~~~~~l~~rd~~~~~~~~~~~~-g~~s~Sp-sL~-l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l 334 (450)
T 3bc8_A 259 AFVQSLDKNFMVP-VGGAIIAGFNEPFIQDISKMYP-GRASASP-SLD-VLITLLSLGCSGYRKLLKERKEMFVYLSTQL 334 (450)
T ss_dssp EEEEEHHHHHSCC-SSCEEEEESCHHHHHHHHHHSC-SCBCSHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCCch-hccEEEEecCHHHHHHHHHHhh-cCCcccH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 55988865 55566664 4455544432111 1112233 222 222222233333 3444567788888888
Q ss_pred hcccc---c-CCCcccEEecCccceeeEEEEee---CccchHHHHHHHHHHCC------------------------cee
Q psy6547 178 SSPAN---K-SKASFKLSSGGLKKSINTLILSV---SAILEVYDVCIKMKDAG------------------------LVT 226 (266)
Q Consensus 178 ~~~~~---~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~g------------------------i~~ 226 (266)
++ +. . ..+.. ...+. + ..+.+.. ....|..++.-.+...| +.+
T Consensus 335 ~~-~~~~~g~~~l~~--~~~~~--~-~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~ 408 (450)
T 3bc8_A 335 KK-LAEAHNERLLQT--PHNPI--S-LAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHA 408 (450)
T ss_dssp HH-HHHHTTCCBCCC--TTCSS--E-EEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTS
T ss_pred Hh-hHHhcCceecCC--ccCCC--c-ceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCee
Confidence 87 44 2 11111 00111 0 1121211 00235666666666554 222
Q ss_pred ccCCCCEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 227 KPISNNIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 227 ~~~~~~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
......++-+.++...+++++++++++|++...+..++
T Consensus 409 E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 409 DNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp SCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 23355788888899999999999999999987765443
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.05 E-value=5.6e-09 Score=90.35 Aligned_cols=210 Identities=17% Similarity=0.192 Sum_probs=138.8
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc-cCcCCcCcc-cccccCCCCcCe
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKL-LAIHYEDVRPDI 104 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~-~~~~~~g~~-~~~~~~~~~~d~ 104 (266)
|.++++++.++. ++++|++-....+. . -++++++++|++.|.+|++|-+| +|+--.|.. -++. ..|+
T Consensus 191 Dyd~~~~~A~~~-kPklIi~G~SaY~r--~----id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~----~ADv 259 (490)
T 3ou5_A 191 DYNQLALTARLF-RPRLIIAGTSAYAR--L----IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADI 259 (490)
T ss_dssp CHHHHHHHHHHH-CCSEEEECCSSCCS--C----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG----TCSE
T ss_pred cHHHHHHHHhhc-CCCeEEECCccCcc--c----cCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc----cceE
Confidence 789999888665 57888887543221 2 28999999999999999999999 554222221 1121 1566
Q ss_pred ee--ecccccCCchhhhhheecHH---------------hhhccC----CCCCCCCCCCcHHHHHHHHHHHHHHhh---c
Q psy6547 105 VI--LGKALSGGLYPISAVLADDE---------------VMGTLV----PGTHGSTYGGNPLACKLAMTALDVILE---E 160 (266)
Q Consensus 105 ~~--~sK~~~~g~~~~g~~~~~~~---------------~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~---~ 160 (266)
++ -.|+|.|+ |.|.++++++ +.+.++ +..+++.. .-..++...++....+ .
T Consensus 260 VTtTTHKTLrGP--rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~---~h~IAAkAVaf~Ea~~p~fk 334 (490)
T 3ou5_A 260 VTTTTHKTLRGA--RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPH---NHAIAAVAVALKQACTPMFR 334 (490)
T ss_dssp EEEESSSTTCSC--SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCC---HHHHHHHHHHHHHHHSHHHH
T ss_pred EeccccccccCC--CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccch---HHHHHHHHHHHHHHHhHhHH
Confidence 66 55999874 7888887653 122221 22222222 1122232233433222 3
Q ss_pred cHHHHHHHHHHHHHHHhhcccccCCCcccEEecCccceeeEEEEeeCccchHHHHHHHHHHCCceec----c-----CCC
Q psy6547 161 NMIENAYKMGEIFRSELSSPANKSKASFKLSSGGLKKSINTLILSVSAILEVYDVCIKMKDAGLVTK----P-----ISN 231 (266)
Q Consensus 161 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~-----~~~ 231 (266)
++.+++.++++.|.+.|.+ .+...+ ..|.++.++.+++... +.+..+..+.|.+.||.+. | ...
T Consensus 335 ~Ya~qVv~NAkaLA~~L~~-~G~~vv-----sGgTdnHlvLvDl~~~-g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~ 407 (490)
T 3ou5_A 335 EYSLQVLKNARAMADALLE-RGYSLV-----SGGTDNHLVLVDLRPK-GLDGARAERVLELVSITANKNTCPGDRSAITP 407 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCEEG-----GGSCSSSEEEEECGGG-TCCHHHHHHHHHHTTEECEEECCTTCCCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCeee-----cCCCCceEEEEecccc-CCCHHHHHHHHHHcCcEECCCCCCCCCCCCCC
Confidence 5888999999999999887 544333 3455666888887652 4567888888999999875 2 234
Q ss_pred CEEEEecc----CCCCHHHHHHHHHHHHHHHH
Q psy6547 232 NIIRLSPA----LNITEQELREGLDIIINTIN 259 (266)
Q Consensus 232 ~~iR~~~~----~~~t~~~i~~~~~~l~~~~~ 259 (266)
+.||+..+ ..+.++|++++.+.|.++++
T Consensus 408 SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 408 GGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 68999875 57889999999999988765
No 237
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=79.78 E-value=3.4 Score=30.01 Aligned_cols=57 Identities=23% Similarity=0.233 Sum_probs=35.4
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHH-HHHHhcCCEEE-Eecccc
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVR-ALCSQYNVLFI-ADEVQT 84 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~-~l~~~~g~~li-~De~~~ 84 (266)
+.+.|++++++. ++..+++.-+.++.|.........+..+ .++.+.+++++ +||.++
T Consensus 43 ~~~~l~~li~~~-~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 43 GLSRLSELIKDY-TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp CHHHHHHHHTTS-EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHHc-CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 689999999665 5777777755555555322222223333 44556687765 799996
No 238
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=70.56 E-value=9.4 Score=33.69 Aligned_cols=81 Identities=12% Similarity=0.033 Sum_probs=53.2
Q ss_pred ccCCcCcccccCCCCCCceeecCCCHHHHHHHHhc--CCCEEEEEEccccCCCC------------------------cc
Q psy6547 3 ITTDPTSYNEFGPHMPGYNIIPYNDVDALEAKLKS--NPNICAFMVEPIQGEAG------------------------AV 56 (266)
Q Consensus 3 ~~~~~~~~~~~~~~~~~v~~~~~~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g------------------------~~ 56 (266)
...|..+-+.|....++ ...+...+.+.|.- .-.+.+|.+.|+....+ ..
T Consensus 2 ~~~~~v~~q~F~W~~~~----~gG~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~ 77 (515)
T 1hvx_A 2 APFNGTMMQYFEWYLPD----DGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTK 77 (515)
T ss_dssp CCCCCCEEECCCTTCCS----SSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCS
T ss_pred CCCCceEEEEEEccCCC----CCCcHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCC
Confidence 34566666777655443 12245555555532 22688999998643110 12
Q ss_pred cCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 57 VPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 57 ~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.-+.+.++++++.||++|+-||+|=|..+.+
T Consensus 78 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 2467899999999999999999999986553
No 239
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=65.56 E-value=8.1 Score=29.53 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=29.7
Q ss_pred CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 40 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
..++++||-..+..|.+. .+.++.+++++||+++|.
T Consensus 159 ~Pa~vicEi~~~~dG~ma----r~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMM----RLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBC----BHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcC----CHHHHHHHHHHcCCcEEE
Confidence 678888987745667776 899999999999999883
No 240
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=63.72 E-value=4.4 Score=26.21 Aligned_cols=22 Identities=18% Similarity=0.199 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhcCCEEEEeccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~ 83 (266)
.=++|+++|+++|++++.|...
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 6688999999999999999765
No 241
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=57.87 E-value=11 Score=29.32 Aligned_cols=62 Identities=18% Similarity=0.228 Sum_probs=41.0
Q ss_pred CCceeecCC---CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 18 PGYNIIPYN---DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 18 ~~v~~~~~~---d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+.+.+||.. .+++++...++-.+ ..|++||..+ ++.+.+++|.++|.+.|+..|+=.+|+.+
T Consensus 160 ~SvKffPm~Gl~~l~E~~avAka~a~-~g~~lEPTGG------Idl~N~~~I~~i~l~aGv~~viPHIYssI 224 (249)
T 3m0z_A 160 SSIKYFPMGGLKHRAEFEAVAKACAA-HDFWLEPTGG------IDLENYSEILKIALDAGVSKIIPHIYSSI 224 (249)
T ss_dssp CEEEECCCTTTTTHHHHHHHHHHHHH-TTCEEEEBSS------CCTTTHHHHHHHHHHHTCSCBCCBCCGGG
T ss_pred CeeeEeecCCcccHHHHHHHHHHHHH-cCceECCCCC------ccHhhHHHHHHHHHHcCCCeeccccccee
Confidence 445555544 35555554432111 1237887654 67789999999999999999998888654
No 242
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=57.82 E-value=24 Score=23.37 Aligned_cols=53 Identities=21% Similarity=0.097 Sum_probs=28.5
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCC----hHHHHHHHHHHHhcCCEEE-Eecccc
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPD----DGYLKKVRALCSQYNVLFI-ADEVQT 84 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~----~~~l~~l~~l~~~~g~~li-~De~~~ 84 (266)
+.+.|++++++.. +..+++--+.++.|..... .+|.+.|.+ + +++++ +||-++
T Consensus 39 ~~~~l~~li~e~~-v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~---~-~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREG-LGKLVVGLPLRTDLKESAQAGKVLPLVEALRA---R-GVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHT-CCEEEEECCCCCCSSSCCCSSTTHHHHHHHHH---T-TCEEEEECCSCC
T ss_pred HHHHHHHHHHHcC-CCEEEEeeccCCCCCcCHHHHHHHHHHHHHhc---C-CCCEEEECCCCC
Confidence 4778888887653 4445444333333333222 233444433 3 77766 888764
No 243
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=57.31 E-value=6.5 Score=25.99 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 61 GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..=++|+++|+++|++++.|...
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHH
Confidence 36688999999999999999665
No 244
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=57.20 E-value=6.2 Score=26.33 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 61 GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..=++|+++|+++|++++.|...
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHH
Confidence 35678999999999999999765
No 245
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=55.46 E-value=6.8 Score=26.16 Aligned_cols=23 Identities=26% Similarity=0.140 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 61 GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..=.+|+++|+++|++++.|...
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHH
Confidence 36688999999999999999655
No 246
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=55.17 E-value=19 Score=27.58 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=28.1
Q ss_pred CEEEEEEccc-cCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 40 NICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 40 ~~~~i~~~~~-~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
..++++||-+ -+..|.+. .+.++.+++++||+++|
T Consensus 158 ~Pa~vicEiv~~~~dG~ma----r~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMA----HTDELRVFADEHGLALI 193 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBC----CHHHHHHHHHHHTCEEE
T ss_pred CceEEEEEEeeeCCCCCcC----CHHHHHHHHHHcCCcEE
Confidence 5788888873 44466665 88999999999999988
No 247
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=52.83 E-value=5.1 Score=31.50 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=40.5
Q ss_pred CCceeecCC---CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 18 PGYNIIPYN---DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 18 ~~v~~~~~~---d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+.|.+||.. .+++++...++-.+ ..|++||..+ ++.+.+++|.++|.+.|+..|+=.+|+.+
T Consensus 183 ~SvKffPM~Gl~~leEl~avAkAca~-~g~~lEPTGG------Idl~Nf~~I~~i~l~aGv~~viPHIYsSI 247 (275)
T 3m6y_A 183 NSLKYFPMKGLAHEEEYRAVAKACAE-EGFALEPTGG------IDKENFETIVRIALEANVEQVIPHVYSSI 247 (275)
T ss_dssp CEEEECCCTTTTTHHHHHHHHHHHHH-HTCEEEEBSS------CCTTTHHHHHHHHHHTTCSCBCCEECGGG
T ss_pred CeeeEeecCCcccHHHHHHHHHHHHH-cCceECCCCC------ccHhHHHHHHHHHHHcCCCeeccccccee
Confidence 344555543 35555554433111 2237887654 67789999999999999999888888654
No 248
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=51.46 E-value=34 Score=28.34 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=33.9
Q ss_pred ecCCC-HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 23 IPYND-VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 23 ~~~~d-~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+|... .+++.+.+++ ..++++++-.. | ++.+..+++.++|+++|+.|+==++.
T Consensus 87 vp~~~a~~ai~ea~~~-~Gv~~vViiT~----G---~~e~~~~~l~~~a~~~g~rliGPNc~ 140 (334)
T 3mwd_B 87 ASLRSAYDSTMETMNY-AQIRTIAIIAE----G---IPEALTRKLIKKADQKGVTIIGPATV 140 (334)
T ss_dssp CCTTTHHHHHHHHTTS-TTCCEEEECCS----C---CCHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred cCHHHHHHHHHHHHHH-CCCCEEEEECC----C---CCHHHHHHHHHHHHHcCCEEEccCCc
Confidence 34444 3566666642 35666666422 1 34568899999999999988844444
No 249
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=51.23 E-value=10 Score=32.78 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=39.2
Q ss_pred HHHHHHhcCCCEEEEEEccccCC------CC--------------cccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 30 ALEAKLKSNPNICAFMVEPIQGE------AG--------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 30 ~l~~~l~~~~~~~~i~~~~~~~~------~g--------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
+++..|++ -...+|-+.|+.-+ ++ ...-+.+.++++++-||++|+-||+|=|+.+.
T Consensus 27 e~~~yl~~-~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 27 ECERYLAP-KGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp HHHHTTTT-TTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHH-hCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 34444532 26889999886322 11 11236789999999999999999999998543
No 250
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=51.12 E-value=19 Score=22.69 Aligned_cols=48 Identities=13% Similarity=0.019 Sum_probs=35.3
Q ss_pred cchHHHHHHHHHHCCceecc-CCCCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 209 ILEVYDVCIKMKDAGLVTKP-ISNNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 209 ~~~~~~~~~~l~~~gi~~~~-~~~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
..+++.+..+|...|+-... ....+.|+.+....++++.++++++|++
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 34788999999988864332 2355667776666788888899888876
No 251
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=50.23 E-value=43 Score=20.71 Aligned_cols=58 Identities=3% Similarity=0.011 Sum_probs=39.6
Q ss_pred eeEEEEeeC-ccchHHHHHHHHHHCCceecc-CCCCEEEEeccCCCCHHHHHHHHHHHHH
Q psy6547 199 INTLILSVS-AILEVYDVCIKMKDAGLVTKP-ISNNIIRLSPALNITEQELREGLDIIIN 256 (266)
Q Consensus 199 ~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~-~~~~~iR~~~~~~~t~~~i~~~~~~l~~ 256 (266)
-+++++..- +..+++.+..+|...|+-... .++.+.|+......++++.+.+++.|++
T Consensus 9 ~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 9 LYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 456665531 145688899999888764332 2345666666666789999999999886
No 252
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=48.57 E-value=19 Score=30.46 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHhcCCEEEEec
Q psy6547 60 DGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.|..+.+.|+++|+.+|+|=
T Consensus 99 ~~~LD~~i~~A~k~GI~viL~l 120 (383)
T 3pzg_A 99 FERLDYTIAKAKELGIKLIIVL 120 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 6789999999999999999994
No 253
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=48.01 E-value=14 Score=31.69 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=43.0
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCCc-------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAGA-------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~-------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|+- .-.+.+|.+.|++..++. ..-+.+.++++++.||++|+-||+|=++.+.+
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 366666665532 226888998886433210 11257899999999999999999999885543
No 254
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=47.59 E-value=24 Score=27.46 Aligned_cols=35 Identities=9% Similarity=0.245 Sum_probs=28.3
Q ss_pred CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 40 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
..++++||-.. ..|.+. .+.++.++|++||+++|.
T Consensus 178 ~Pa~VicEi~~-ddG~ma----r~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMG-DDGNAM----SKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBC-TTSSBC----CHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeC-CCCCcC----CHHHHHHHHHHcCCcEEE
Confidence 67888888764 346665 889999999999999883
No 255
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=47.27 E-value=15 Score=31.61 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=41.5
Q ss_pred CHHHHHHH-Hhc--CCCEEEEEEccccCCC-C-----c----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAK-LKS--NPNICAFMVEPIQGEA-G-----A----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~-l~~--~~~~~~i~~~~~~~~~-g-----~----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+++.+.+. +.- .-.+.+|.+.|++... + . ..-+.+.++++++-||++|+-||+|-|+.+.+
T Consensus 12 ~~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 12 NWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp CHHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 45555543 221 1168899999974332 2 1 11356799999999999999999999996543
No 256
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=47.14 E-value=24 Score=25.10 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=32.0
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHH-HHHHHhcCCEEE-EeccccC
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKV-RALCSQYNVLFI-ADEVQTG 85 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l-~~l~~~~g~~li-~De~~~~ 85 (266)
+.+.|++++++.. +..|++--+.++.|.........++. .++.++.++++. +||-++-
T Consensus 41 ~~~~l~~li~e~~-v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 41 DWNIIERLLKEWQ-PDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp CHHHHHHHHHHHC-CSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred HHHHHHHHHHHcC-CCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 6899999997753 45555544444445432112222222 223334677665 9998863
No 257
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=46.35 E-value=29 Score=26.77 Aligned_cols=34 Identities=9% Similarity=0.215 Sum_probs=27.4
Q ss_pred CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 40 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
..++++||-. +..|... .+.++.+++++||+++|
T Consensus 167 ~Pa~vicEi~-~~dG~ma----r~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMA----RAPECIEFANKHNMALV 200 (217)
T ss_dssp CSCEEEEEBB-CTTSSBC----CHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEe-CCCCCcc----CHHHHHHHHHHcCCCEE
Confidence 5688888866 4456665 88999999999999988
No 258
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=45.17 E-value=19 Score=30.51 Aligned_cols=48 Identities=17% Similarity=0.068 Sum_probs=36.3
Q ss_pred CEEEEEEccccCCCC--------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 40 NICAFMVEPIQGEAG--------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g--------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.+|.+.|+....+ ...-+.+.++++++-||++|+-||+|-++.+.+
T Consensus 34 Gv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 34 GVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp TCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 578888888643321 122346789999999999999999999996553
No 259
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=44.06 E-value=17 Score=31.91 Aligned_cols=60 Identities=13% Similarity=0.193 Sum_probs=41.5
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCCc--------------ccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAGA--------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~--------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
|+..+.+.|.- .-.+.+|.+.|++..++. ..-+.+.++++++-||++|+-||+|=|+...
T Consensus 30 dl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 30 DLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 55555554421 115888999997543321 1125678999999999999999999998644
No 260
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=44.03 E-value=22 Score=31.35 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=43.5
Q ss_pred CH-HHHHHHHhc--CCCEEEEEEcccc----------CCC----------C--cccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 27 DV-DALEAKLKS--NPNICAFMVEPIQ----------GEA----------G--AVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 27 d~-~~l~~~l~~--~~~~~~i~~~~~~----------~~~----------g--~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
|+ +.+.+.|+- .-.+.+|.+.|++ ... . ...-+.+.++++++-||++|+-||+|=
T Consensus 34 d~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~ 113 (527)
T 1gcy_A 34 DWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (527)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35 555555532 2268899999977 111 0 222457899999999999999999999
Q ss_pred cccCcCC
Q psy6547 82 VQTGLGR 88 (266)
Q Consensus 82 ~~~~~~~ 88 (266)
++.+.+.
T Consensus 114 V~NHt~~ 120 (527)
T 1gcy_A 114 VPNHMNR 120 (527)
T ss_dssp CCSBCCT
T ss_pred eecCcCC
Confidence 9975543
No 261
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=49.93 E-value=4.8 Score=26.26 Aligned_cols=22 Identities=9% Similarity=0.255 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhcCCEEEEeccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~ 83 (266)
.=++|+++|+++|++++.|...
T Consensus 28 ~A~~I~e~A~e~~VPi~e~~~L 49 (87)
T 3b1s_B 28 IAQKIVEIAENYSIPVVRKPEL 49 (87)
Confidence 5578999999999999999766
No 262
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=43.42 E-value=19 Score=31.39 Aligned_cols=48 Identities=13% Similarity=0.017 Sum_probs=36.2
Q ss_pred CEEEEEEccccCCCCc-------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 40 NICAFMVEPIQGEAGA-------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~-------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.+|.+.|++..++. ..-+.+.++++++-||++|+-||+|=++.+.+
T Consensus 48 Gv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 48 GVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 6789999887433210 11256799999999999999999999986543
No 263
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=42.79 E-value=22 Score=30.47 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=49.4
Q ss_pred cCCcCcccccCCCCCCceeecCCC-HHHHHHHHhc--CCCEEEEEEccccCCC-C------------------------c
Q psy6547 4 TTDPTSYNEFGPHMPGYNIIPYND-VDALEAKLKS--NPNICAFMVEPIQGEA-G------------------------A 55 (266)
Q Consensus 4 ~~~~~~~~~~~~~~~~v~~~~~~d-~~~l~~~l~~--~~~~~~i~~~~~~~~~-g------------------------~ 55 (266)
+.+..+.+.|....++ -.+ ...+.+.|+. .-.+.+|.+.|+.... + .
T Consensus 7 ~~~~viyq~f~w~~~~-----~G~~~~gi~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~ 81 (435)
T 1mxg_A 7 EEGGVIMQAFYWDVPG-----GGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVET 81 (435)
T ss_dssp GGTCCEEECCCTTCCC-----SSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSC
T ss_pred cCCcEEEEEEEeccCC-----CCCHHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCC
Confidence 3445555555433221 124 5656655532 1157889988863222 1 0
Q ss_pred ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 56 VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 56 ~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
..-+.+.++++++-||++|+-||+|-+..+.+
T Consensus 82 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 12357899999999999999999999986543
No 264
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=42.30 E-value=22 Score=30.38 Aligned_cols=29 Identities=21% Similarity=0.286 Sum_probs=25.4
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 59 DDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 59 ~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
+.+.++++++-||++|+-||+|=++.+++
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 56799999999999999999999986543
No 265
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=42.03 E-value=20 Score=31.04 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=43.1
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|+- .-.+.+|.+.|++.... ...-+.+.++++++-||++|+-||+|=++.+.+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 467776666632 11578888888642211 011357899999999999999999999986543
No 266
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=41.52 E-value=27 Score=31.47 Aligned_cols=62 Identities=13% Similarity=0.191 Sum_probs=44.1
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCC-------C----------cccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEA-------G----------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~-------g----------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
.|++.+.+.|.- .-.+.+|.++|++... | ...-+.+.++++++-||++|+-||+|-++.+.
T Consensus 145 Gdl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~ 224 (601)
T 3edf_A 145 GDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHI 224 (601)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCccc
Confidence 367777666632 2268899999975321 0 01235678999999999999999999998655
Q ss_pred C
Q psy6547 87 G 87 (266)
Q Consensus 87 ~ 87 (266)
+
T Consensus 225 ~ 225 (601)
T 3edf_A 225 G 225 (601)
T ss_dssp C
T ss_pred C
Confidence 3
No 267
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=41.41 E-value=15 Score=25.64 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCCEEEEeccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~ 83 (266)
.=.+|+++|+++|++++.|...
T Consensus 72 ~A~~I~~~A~e~~VPi~e~~~L 93 (123)
T 2jli_A 72 QVQTVRKIAEEEGVPILQRIPL 93 (123)
T ss_dssp HHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 5678999999999999999665
No 268
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=41.26 E-value=22 Score=30.85 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=43.7
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCC-CC--------------------cccCChHHHHHHHHHHHhcCCEEEEecc
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGE-AG--------------------AVVPDDGYLKKVRALCSQYNVLFIADEV 82 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~-~g--------------------~~~~~~~~l~~l~~l~~~~g~~li~De~ 82 (266)
.|+..+.+.|.- .-.+.+|.+.|++.. .+ ...-+.+.++++++-||++|+-||+|-|
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 367666666532 236889999886431 11 1123578999999999999999999998
Q ss_pred ccCcC
Q psy6547 83 QTGLG 87 (266)
Q Consensus 83 ~~~~~ 87 (266)
..+.+
T Consensus 120 ~NH~~ 124 (478)
T 2guy_A 120 ANHMG 124 (478)
T ss_dssp CSBCC
T ss_pred cccCC
Confidence 86543
No 269
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=40.90 E-value=26 Score=30.44 Aligned_cols=62 Identities=15% Similarity=0.205 Sum_probs=44.0
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCC-C--------------------cccCChHHHHHHHHHHHhcCCEEEEecc
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEA-G--------------------AVVPDDGYLKKVRALCSQYNVLFIADEV 82 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~-g--------------------~~~~~~~~l~~l~~l~~~~g~~li~De~ 82 (266)
.|+..+.+.|.- .-.+.+|.+.|++... + ...-+.+.++++++.||++|+-||+|=+
T Consensus 40 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp CCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467766666532 2368899999875321 1 1123578999999999999999999999
Q ss_pred ccCcC
Q psy6547 83 QTGLG 87 (266)
Q Consensus 83 ~~~~~ 87 (266)
+.+.+
T Consensus 120 ~NH~~ 124 (484)
T 2aaa_A 120 PDHMG 124 (484)
T ss_dssp CSBCC
T ss_pred cCCcC
Confidence 86543
No 270
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=40.69 E-value=20 Score=32.10 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=42.5
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
|+..+.+.|.- .-.+.+|.+.|+..... ...-+.+.++++++-||++|+-||+|=++.+++
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 66666555532 11578888888632211 112357899999999999999999999986654
No 271
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=39.97 E-value=16 Score=26.03 Aligned_cols=22 Identities=18% Similarity=0.199 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCCEEEEeccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~ 83 (266)
.=.+|+++|+++|++++.|...
T Consensus 82 ~A~~I~e~A~e~gVPi~e~~~L 103 (137)
T 3bzs_A 82 KALQIIKLAELYDIPVIEDIPL 103 (137)
T ss_dssp HHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 5678999999999999999765
No 272
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=39.88 E-value=22 Score=30.87 Aligned_cols=61 Identities=11% Similarity=0.139 Sum_probs=43.8
Q ss_pred CHHHHHHH-Hhc--CCCEEEEEEccccCCCCc--------c----------cCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy6547 27 DVDALEAK-LKS--NPNICAFMVEPIQGEAGA--------V----------VPDDGYLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 27 d~~~l~~~-l~~--~~~~~~i~~~~~~~~~g~--------~----------~~~~~~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
+...+.+. ++- .-.+.+|.+.|++...+. + .-+.+.++++++-||++|+-||+|-++.+
T Consensus 20 ~~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH 99 (471)
T 1jae_A 20 KWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINH 99 (471)
T ss_dssp CHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 57776665 332 227999999997543321 1 12467899999999999999999999965
Q ss_pred cC
Q psy6547 86 LG 87 (266)
Q Consensus 86 ~~ 87 (266)
.+
T Consensus 100 ~~ 101 (471)
T 1jae_A 100 MT 101 (471)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 273
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=39.03 E-value=23 Score=31.76 Aligned_cols=61 Identities=20% Similarity=0.285 Sum_probs=42.4
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCC---C----------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEA---G----------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~---g----------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
|++.+.+.|+- .-.+.+|.+.|+.... | ...-+.+.++++++.||++|+-||+|=++.+++
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 66666555532 1157888888863211 1 011356899999999999999999999997654
No 274
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=39.00 E-value=28 Score=29.75 Aligned_cols=61 Identities=11% Similarity=0.176 Sum_probs=42.0
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC-c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG-A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
|+..+.+.|+- .-.+.+|.++|++..++ . ..-+.+.++++++-||++|+-||+|=++.+.+
T Consensus 34 dl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 34 NLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp SHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 55555555431 12578899988643221 0 11346799999999999999999999996554
No 275
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=38.70 E-value=19 Score=31.36 Aligned_cols=62 Identities=21% Similarity=0.216 Sum_probs=42.6
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCCc-------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAGA-------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~-------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|+- .-.+.+|.+.|++..... ..-+.+.++++++-||++|+-||+|=++.+.+
T Consensus 53 Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 53 GDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 467666666532 116788988886432110 11235789999999999999999999986543
No 276
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=38.46 E-value=31 Score=31.22 Aligned_cols=64 Identities=20% Similarity=0.218 Sum_probs=42.8
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCCc---------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAGA---------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~---------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
+.+.+.+.|.. .-.+.+|.+.|++...+. ..-+.+.++++++-|+++|+-||+|=++..++..
T Consensus 152 ~~~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~ 231 (618)
T 3m07_A 152 TFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPE 231 (618)
T ss_dssp SHHHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCC
Confidence 45555555422 115788888887321110 1135678999999999999999999999766543
Q ss_pred C
Q psy6547 90 G 90 (266)
Q Consensus 90 g 90 (266)
+
T Consensus 232 ~ 232 (618)
T 3m07_A 232 G 232 (618)
T ss_dssp S
T ss_pred c
Confidence 3
No 277
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=38.43 E-value=22 Score=30.82 Aligned_cols=61 Identities=13% Similarity=0.123 Sum_probs=42.6
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCC-----C-------------------cccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEA-----G-------------------AVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~-----g-------------------~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
+...+.+.|.- .-.+.+|.+.|++... | ...-+.+.++++++-||++|+-||+|
T Consensus 21 ~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 100 (480)
T 1ud2_A 21 HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGD 100 (480)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45555555532 1158899999875311 1 12246789999999999999999999
Q ss_pred ccccCcC
Q psy6547 81 EVQTGLG 87 (266)
Q Consensus 81 e~~~~~~ 87 (266)
=|+.+.+
T Consensus 101 ~V~NH~~ 107 (480)
T 1ud2_A 101 VVMNHKM 107 (480)
T ss_dssp ECCSEEC
T ss_pred EccCccc
Confidence 9996553
No 278
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=38.42 E-value=22 Score=30.85 Aligned_cols=61 Identities=15% Similarity=0.080 Sum_probs=42.4
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC------------------------cccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG------------------------AVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g------------------------~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
+...+.+.|.- .-.+.+|.+.|++...+ ...-+.+.++++++.||++|+-||+|
T Consensus 19 ~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD 98 (483)
T 3bh4_A 19 HWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGD 98 (483)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45555555532 11578999998743110 12246789999999999999999999
Q ss_pred ccccCcC
Q psy6547 81 EVQTGLG 87 (266)
Q Consensus 81 e~~~~~~ 87 (266)
=|..+.+
T Consensus 99 ~V~NH~~ 105 (483)
T 3bh4_A 99 VVLNHKA 105 (483)
T ss_dssp ECCSEEC
T ss_pred EccCccc
Confidence 9986553
No 279
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=38.06 E-value=95 Score=21.25 Aligned_cols=55 Identities=5% Similarity=0.138 Sum_probs=34.0
Q ss_pred CCCCceeecCCCHHHHHHHHhc----CC---CEEEEEEc--cccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 16 HMPGYNIIPYNDVDALEAKLKS----NP---NICAFMVE--PIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 16 ~~~~v~~~~~~d~~~l~~~l~~----~~---~~~~i~~~--~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
+.--+...+..|++++.+.|++ .+ +-+.|+++ ... . ..++.+|.++++++|+.+|
T Consensus 15 ~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~---~-----~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 15 FTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE---S-----PVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC---S-----SCCHHHHHHHHHTTTCEEE
T ss_pred eeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC---C-----hHHHHHHHHHHHHcCCEEE
Confidence 3444566666788776666643 32 22333433 222 1 1279999999999999886
No 280
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=37.92 E-value=18 Score=26.02 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhcCCEEEEeccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~ 83 (266)
.=.+|+++|+++|++++.|...
T Consensus 81 ~A~~I~e~A~e~gVPi~e~~~L 102 (144)
T 2jlj_A 81 QVQTVRKIAEEEGVPILQRIPL 102 (144)
T ss_dssp HHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 5678999999999999999665
No 281
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=37.84 E-value=39 Score=26.31 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=28.0
Q ss_pred CEEEEEEccccCC----------CCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 40 NICAFMVEPIQGE----------AGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 40 ~~~~i~~~~~~~~----------~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
..++++||-.... .|.+. .+.++.+++++||+.++.
T Consensus 167 ~PagVicEi~~~~~~~~~~~~~~dG~ma----r~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 167 RPVAVISEIVDDGQEVEGRAVRAAPGML----RGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CSBEEEEEBEECCEECTTSSCEESCEEC----CHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEeCCCcccccccccCCCCCcC----CHHHHHHHHHHcCCcEEE
Confidence 5688888866431 46665 889999999999999983
No 282
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=37.63 E-value=32 Score=30.97 Aligned_cols=63 Identities=17% Similarity=0.146 Sum_probs=42.7
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCCc----c-----------cCChHHHHHHHHHHHhcCCEEEEeccccCcCCc
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAGA----V-----------VPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 89 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~----~-----------~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~~ 89 (266)
|+..+.+.|+- .-.+.+|.+.|++...+. + .-+.+.++++++-||++|+-||+|=++.+++..
T Consensus 142 ~~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~ 221 (602)
T 2bhu_A 142 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPS 221 (602)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccC
Confidence 55666555532 115788888887322110 0 124679999999999999999999999766533
No 283
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=37.49 E-value=24 Score=30.72 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=42.2
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC------------------------cccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG------------------------AVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g------------------------~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
+...+.+.|.- .-.+.+|.+.|++...+ ...-+.+.++++++-||++|+-||+|
T Consensus 23 ~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 102 (485)
T 1wpc_A 23 HWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGD 102 (485)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45555555532 11688999998753110 12246789999999999999999999
Q ss_pred ccccCc
Q psy6547 81 EVQTGL 86 (266)
Q Consensus 81 e~~~~~ 86 (266)
=|..+.
T Consensus 103 ~V~NH~ 108 (485)
T 1wpc_A 103 VVMNHK 108 (485)
T ss_dssp ECCSEE
T ss_pred Eecccc
Confidence 998655
No 284
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=36.82 E-value=29 Score=30.91 Aligned_cols=62 Identities=19% Similarity=0.184 Sum_probs=42.0
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCCc----c-----------cCChHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAGA----V-----------VPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~----~-----------~~~~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
+.+.+.+.|.. .-.+.+|.+.|++...+. + .-+.+.++++++-||++|+-||+|=++..++.
T Consensus 117 ~~~~~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 195 (558)
T 3vgf_A 117 TFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGP 195 (558)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccC
Confidence 45565555532 115788888887432211 0 12357899999999999999999999966543
No 285
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=36.70 E-value=70 Score=26.37 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=35.4
Q ss_pred CCceeec---CCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 18 PGYNIIP---YNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 18 ~~v~~~~---~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
++|..+. --|.+.++.+++ ...++++++..- .|. .+.+.++.|.+...+.|++||
T Consensus 216 ~~V~il~~~pG~~~~~l~~~~~--~g~~GiVle~~G--~Gn--~p~~~~~~l~~a~~~~gi~VV 273 (331)
T 1agx_A 216 PGVQIVYGSDNMMPDAYQAFAK--AGVKAIIHAGTG--NGS--MANYLVPEVRKLHDEQGLQIV 273 (331)
T ss_dssp CCEEEEECCSSCCTHHHHHHHT--TTCSEEEEEEBT--TTB--CCTTHHHHHHHHHHTTCCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHh--CCCCEEEEeeEC--CCC--CCHHHHHHHHHHHHcCCCEEE
Confidence 4444443 236788888883 357889888643 233 336677888777647788765
No 286
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=36.33 E-value=97 Score=23.55 Aligned_cols=39 Identities=5% Similarity=0.130 Sum_probs=25.8
Q ss_pred CEEEEEEccccCC---CCcc-cCChHHHHHHHHHHHhcCCEEE
Q psy6547 40 NICAFMVEPIQGE---AGAV-VPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 40 ~~~~i~~~~~~~~---~g~~-~~~~~~l~~l~~l~~~~g~~li 78 (266)
..+.|+++|.... .|.+ ....++-+.+.++|+++|+++|
T Consensus 125 g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 125 GAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp TCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 4577888876332 1321 2234677899999999998766
No 287
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=35.91 E-value=24 Score=31.60 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=43.1
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
|+..+.+.|+- .-.+.+|.+.|+..... ....+.+.++++++-||++|+-||+|=++.+++
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 66666655532 11678999998743221 111357899999999999999999999997654
No 288
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=35.90 E-value=28 Score=31.65 Aligned_cols=60 Identities=18% Similarity=0.228 Sum_probs=41.7
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
|++.+.+.|.- .-.+.+|.++|+....+ ...-+.+.++++++-||++|+-||+|=++.+.
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHt 311 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHT 311 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEeccccc
Confidence 55555555421 11578899988643221 11236789999999999999999999998654
No 289
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=35.69 E-value=28 Score=30.91 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=43.3
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCCc--------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAGA--------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~--------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++..++. ..-+.+.++++++.||++|+-||+|=|+.+.+
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 466666665522 115788998886433211 11357899999999999999999999986554
No 290
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=34.88 E-value=30 Score=30.89 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=42.4
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC---c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG---A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g---~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++..+. . ..-+.+.++++++-||++|+-||+|=|..+.+
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 356666554421 11578898888643221 1 11256799999999999999999999986553
No 291
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=34.51 E-value=76 Score=22.08 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=33.6
Q ss_pred CceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 19 GYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 19 ~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.++.++-+..+.+..++. ..++.+++++.... ++ +++.++|+++|++|+.=
T Consensus 54 ~l~I~~G~r~~~~l~a~~-~~~~~~iIlt~g~~------~~----~~i~~~A~~~~ipvl~t 104 (139)
T 2ioj_A 54 AALVTGGDRSDLLLTALE-MPNVRCLILTGNLE------PV----QLVLTKAEERGVPVILT 104 (139)
T ss_dssp EEEEEETTCHHHHHHHTT-CTTEEEEEEETTCC------CC----HHHHHHHHHHTCCEEEC
T ss_pred EEEEEcCCHHHHHHHHHh-CCCCcEEEEcCCCC------CC----HHHHHHHHHCCCeEEEE
Confidence 466666777777777772 14688888874332 22 34458888999998853
No 292
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=33.72 E-value=31 Score=29.58 Aligned_cols=60 Identities=12% Similarity=0.079 Sum_probs=41.2
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC--------------------cccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG--------------------AVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g--------------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
|+..+.+.|.. .-.+.+|.+.|++.... ...-+.+.++++++-|+++|+-||+|-+..
T Consensus 28 ~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 28 NFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 55565555532 12688999999752110 011256899999999999999999999885
Q ss_pred Cc
Q psy6547 85 GL 86 (266)
Q Consensus 85 ~~ 86 (266)
..
T Consensus 108 H~ 109 (449)
T 3dhu_A 108 HT 109 (449)
T ss_dssp EE
T ss_pred cC
Confidence 44
No 293
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=33.48 E-value=32 Score=30.85 Aligned_cols=62 Identities=15% Similarity=0.144 Sum_probs=42.5
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC---cc-----------cCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG---AV-----------VPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g---~~-----------~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++...+ .+ .-+.+.++++++.||++|+-||+|-|..+.+
T Consensus 37 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 37 GDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 366666655421 11578888888643321 11 1256789999999999999999999986553
No 294
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=39.66 E-value=8.9 Score=26.38 Aligned_cols=23 Identities=9% Similarity=0.094 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhcCCEEEEecccc
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~~ 84 (266)
.=.+|+++|+++|++++.|....
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~LA 50 (114)
T 3b0z_B 28 IALRIREIGAEHRVPTLEAPPLA 50 (114)
Confidence 55789999999999999997663
No 295
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=33.17 E-value=33 Score=30.49 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=41.8
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC---c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG---A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g---~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++..+. . ..-+.+.++++++-||++|+-||+|-|..+.+
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 356555554421 11578888888643321 1 11256789999999999999999999986543
No 296
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=32.50 E-value=85 Score=25.91 Aligned_cols=54 Identities=11% Similarity=0.222 Sum_probs=35.2
Q ss_pred CHHHHHHHHhc----CCCEEEEEEccccCCCCcc------cCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 27 DVDALEAKLKS----NPNICAFMVEPIQGEAGAV------VPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 27 d~~~l~~~l~~----~~~~~~i~~~~~~~~~g~~------~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
++++|+..+++ ++.+.+|++.+.+...+.- .--.+....|..+|+++|+++|+=
T Consensus 139 si~~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 139 RIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp CHHHHHHHHHHHHHHCTTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 56776666542 3368899998876544311 011346678888999999888853
No 297
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=32.32 E-value=1.1e+02 Score=25.49 Aligned_cols=47 Identities=11% Similarity=0.335 Sum_probs=30.9
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
|.+.++.+++ ...++|+++... .|.+..++++++.|.+.. +.|++||
T Consensus 242 ~~~~l~a~~~--~g~~GiVle~~G--~Gn~p~~~~~~~~l~~a~-~~Gi~VV 288 (358)
T 2him_A 242 SADVVRNFLR--QPVKALILRSYG--VGNAPQNKAFLQELQEAS-DRGIVVV 288 (358)
T ss_dssp CHHHHHHHTS--SSCSEEEEEEBT--TTBCCCCHHHHHHHHHHH-HTTCEEE
T ss_pred CHHHHHHHHh--CCCCEEEEecCC--CCCCCCcHHHHHHHHHHH-HCCCEEE
Confidence 6888888883 357899988654 233322256777777664 5677765
No 298
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=32.31 E-value=34 Score=30.33 Aligned_cols=62 Identities=13% Similarity=0.197 Sum_probs=42.7
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC---c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG---A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g---~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++..+. . ..-+.+.++++++-||++|+-||+|=+....+
T Consensus 28 Gdl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (543)
T 2zic_A 28 GDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTS 105 (543)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 366666665421 11588899998643321 1 11256789999999999999999999986543
No 299
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=32.20 E-value=41 Score=30.48 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=45.1
Q ss_pred CCHHHHHHHHhc--C-CCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcC--C--EEEEeccccC
Q psy6547 26 NDVDALEAKLKS--N-PNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYN--V--LFIADEVQTG 85 (266)
Q Consensus 26 ~d~~~l~~~l~~--~-~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g--~--~li~De~~~~ 85 (266)
.|++.+.+.|.- . -.+.+|.+.|++...+ ...-+.+.++++++-||++| + -||+|=|+.+
T Consensus 188 G~~~gi~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH 267 (637)
T 1ji1_A 188 GDLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNH 267 (637)
T ss_dssp CCHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSB
T ss_pred cCHHHHHHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECccc
Confidence 467766665532 3 3689999998743221 11135789999999999999 9 9999999976
Q ss_pred cCC
Q psy6547 86 LGR 88 (266)
Q Consensus 86 ~~~ 88 (266)
++.
T Consensus 268 ~~~ 270 (637)
T 1ji1_A 268 TGD 270 (637)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
No 300
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=31.93 E-value=64 Score=25.87 Aligned_cols=52 Identities=12% Similarity=0.130 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCC---CcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEA---GAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~---g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.++|++.++ ....++|-+.+....+ ....+..+.++.+.++|.++|++|++-
T Consensus 110 ~~el~~~~~-~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 110 TEELQRCVN-DLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp HHHHHHHHH-TTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHh-cCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 455666664 3356777666544311 123356677899999999999998864
No 301
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=31.87 E-value=48 Score=29.91 Aligned_cols=61 Identities=11% Similarity=-0.001 Sum_probs=41.3
Q ss_pred CHHHHHHHH-hc--CCCEEEEEEccccCCCCc---------------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKL-KS--NPNICAFMVEPIQGEAGA---------------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l-~~--~~~~~~i~~~~~~~~~g~---------------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
++..+.+.+ .- .-.+.+|.+.|+....+. ..-+.+.++++++-||++|+-||+|=++..++
T Consensus 153 ~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 231 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFP 231 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 555554443 21 225788888886432110 11346899999999999999999999997653
No 302
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=31.84 E-value=1.2e+02 Score=24.67 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=39.0
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc--CCEEEEec
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADE 81 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~--g~~li~De 81 (266)
..+..++++..+.++.++++..++ +..++++.+... -+.+..+.+.++.+++ ++++|+|-
T Consensus 101 v~~~~pe~~~~~~~~~~ql~~~~~---~~dav~IG~Gl~------~~~~~~~~v~~~l~~~~~~~pvVlDa 162 (311)
T 3bgk_A 101 LHSHLPEAMAFDMVEKDRLSEQIT---AADVVLMGPGLA------EDDLAQTTFDVVWQAIEPKQTLIIDG 162 (311)
T ss_dssp HHHHCTTSEEEETTCHHHHHHHHH---HCSEEEECTTCC------SSHHHHHHHHHHHHHCCTTSEEEEET
T ss_pred HhhCChhHheeccccHHHHHHHhc---cCCEEEEcCCCC------CCHHHHHHHHHHHHHcCCCCeEEEeC
Confidence 344567777777777788888874 345666653221 2344556666666665 89999995
No 303
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=31.31 E-value=36 Score=30.19 Aligned_cols=62 Identities=15% Similarity=0.111 Sum_probs=43.0
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCCCC---c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGEAG---A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~~g---~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.|+..+.+.|.- .-.+.+|.+.|++..++ . ..-+.+.++++++.||++|+-||+|=+..+.+
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 105 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVINHTS 105 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECSBCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 366666665532 11578899988643321 1 11256789999999999999999999986543
No 304
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=30.85 E-value=31 Score=31.69 Aligned_cols=61 Identities=8% Similarity=0.136 Sum_probs=42.5
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAG-------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g-------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
|++.+.+.|.- .-.+.+|.++|++..++ ...-+.+.++++++-||++|+-||+|-++.+.+
T Consensus 263 dl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts 338 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTN 338 (696)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccccccC
Confidence 56666555532 11578899998643221 112357899999999999999999999986543
No 305
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=30.75 E-value=98 Score=24.52 Aligned_cols=64 Identities=13% Similarity=0.082 Sum_probs=41.8
Q ss_pred ceeecCCCHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 20 YNIIPYNDVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 20 v~~~~~~d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
++-.+.+|.++..+++++ .+.+..+=+....-.. ...+.+++|.++++.+|..|+.|==..+.+
T Consensus 35 iVALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~----~G~~~v~~L~~~a~~~g~~VflDlK~~DIp 99 (260)
T 3eww_A 35 CLSADVSLARELLQLADALGPSICMLKTHVDILND----FTLDVMKELITLAKCHEFLIFENRKFADIG 99 (260)
T ss_dssp EEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCTT----CCHHHHHHHHHHHHHHTCEEEEEEEECSCH
T ss_pred EEEeCCCCHHHHHHHHHHhCCCceEEEEcHHHHHH----hCHHHHHHHHHHHhhcCCeEEEEeeccccH
Confidence 455667788888777765 3344444444332211 234688999999888999999996665553
No 306
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=30.43 E-value=54 Score=25.52 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=31.3
Q ss_pred CHHHHHHHHhc---CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE--Eeccc
Q psy6547 27 DVDALEAKLKS---NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI--ADEVQ 83 (266)
Q Consensus 27 d~~~l~~~l~~---~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li--~De~~ 83 (266)
+.++|.+.|++ ++++++|++... +++|.+....+..+.+.++.++.+.++| ++...
T Consensus 30 ~~~~l~~~l~~a~~d~~v~~ivL~~~-s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a 90 (240)
T 3rst_A 30 NHRTFLKNLERAKDDKTVKGIVLKVN-SPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMA 90 (240)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEEEEE-ECCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhCCCcEEEEEEec-CCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCee
Confidence 45666666643 668999998754 4566654223333344444332566665 45444
No 307
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=30.42 E-value=1.4e+02 Score=24.21 Aligned_cols=60 Identities=13% Similarity=0.213 Sum_probs=38.9
Q ss_pred cCCCCCCceeecCCCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc--CCEEEEec
Q psy6547 13 FGPHMPGYNIIPYNDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADE 81 (266)
Q Consensus 13 ~~~~~~~v~~~~~~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~--g~~li~De 81 (266)
..+..++++..+.++.++++..++ +..++++.+... .+.+..+.+.++.+.+ ++++|+|-
T Consensus 87 v~~~~pe~~~~~~~~~~ql~~~~~---~~dav~IG~Gl~------~~~~~~~~v~~~l~~~~~~~pvVlDa 148 (310)
T 2r3b_A 87 LHARCPEAMVVGFEETVLLTNVVE---QADVILIGPGLG------LDATAQQILKMVLAQHQKQQWLIIDG 148 (310)
T ss_dssp HHHHCTTCEEECTTCHHHHHHHHH---HCSEEEECTTCC------SSHHHHHHHHHHHHHCCTTCEEEEET
T ss_pred HhhCChhheEecCCcHHHHHHHhc---cCCEEEEeCCCC------CCHHHHHHHHHHHHhcCCCCcEEEcC
Confidence 345567788777777778888774 345666653221 2344556666666665 89999995
No 308
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=30.15 E-value=36 Score=27.91 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=31.8
Q ss_pred CHHHHHHHHhcCC--CEEEEEEccccCCCCcccCC---hHHHHHHHHHHHhcCCEEEEec
Q psy6547 27 DVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPD---DGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 27 d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~---~~~l~~l~~l~~~~g~~li~De 81 (266)
+.++++.+.++.. -+|+-+. +. .+....+ .+.++++.+.|.++|+.+|+|-
T Consensus 70 ~~~~~~~l~~~~G~N~VRi~~~-~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 70 NKDSLKWLRDDWGITVFRAAMY-TA---DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp SHHHHHHHHHHTCCSEEEEEEE-SS---TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEeE-EC---CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4567777654432 3555443 21 1112122 3678999999999999999983
No 309
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=29.96 E-value=59 Score=30.52 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=31.6
Q ss_pred EEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 42 CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 42 ~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.-+.+++.++....-.-..+.++++++-||++|+-||+|=|+.+.+
T Consensus 360 ~y~a~~~~ygt~~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts 405 (884)
T 4aio_A 360 LWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLD 405 (884)
T ss_dssp EEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECCSBCS
T ss_pred cccCCCcccccCccccchHHHHHHHHHHHHhcCCceeeeecccccc
Confidence 3344676665432211113469999999999999999999996653
No 310
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=29.40 E-value=1e+02 Score=25.17 Aligned_cols=64 Identities=14% Similarity=0.095 Sum_probs=41.4
Q ss_pred ceeecCCCHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 20 YNIIPYNDVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 20 v~~~~~~d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
++-.+.+|.++..+++++ .+.+..+=+....-.. ...+.+++|.++++++|..|+.|-=..+.+
T Consensus 87 iVALD~~~~~~al~l~~~l~~~v~~vKvG~~l~~~----~G~~~v~~L~~~a~~~g~~IflDlK~~DIp 151 (312)
T 3g3d_A 87 CLSADVSLARELLQLADALGPSICMLKTHVDILND----FTLDVMKELITLAKCHEFLIFEDRKFADIG 151 (312)
T ss_dssp EEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCTT----CCHHHHHHHHHHHHHHTCEEEEEEEECSCH
T ss_pred EEEeCCCCHHHHHHHHHHhCCCceEEEEcHHHHHH----hCHHHHHHHHHHHhhCCCEEEEECcccccH
Confidence 455566788887777755 3344444444322111 234688999999988999999996665553
No 311
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=29.18 E-value=43 Score=26.44 Aligned_cols=66 Identities=12% Similarity=0.029 Sum_probs=46.0
Q ss_pred CCCCCCceeec--CCCHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 14 GPHMPGYNIIP--YNDVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 14 ~~~~~~v~~~~--~~d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
.|-..++..+. .-.+..++.+|+. .+-+..+-+-. +...+++.+.+++..+++++||+.+..-.+.
T Consensus 9 KPR~~GlT~v~dkglg~~~~~d~Le~~g~yID~lKfg~----Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl 77 (251)
T 1qwg_A 9 EDFQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGW----GTSAVIDRDVVKEKINYYKDWGIKVYPGGTL 77 (251)
T ss_dssp CCCCCCCEEEEESSCCHHHHHHHHHHHGGGCSEEEECT----TGGGGSCHHHHHHHHHHHHTTTCEEEECHHH
T ss_pred CCcccCeeEEecCCCCHHHHHHHHHHhhhhcceEEecC----ceeeecCHHHHHHHHHHHHHcCCeEECCcHH
Confidence 56666666664 3478889998854 22344444443 2335689999999999999999998876653
No 312
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=29.01 E-value=57 Score=29.00 Aligned_cols=49 Identities=16% Similarity=0.272 Sum_probs=32.7
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.++++++. .+..|.+---......+ .+..+++.++|++||+++|+++
T Consensus 28 ~~~ve~al~~--Gv~~vQlR~K~~~~~~~---~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQN--GVTLVQIREKDADTKFF---IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHT--TCSEEEECCSSSCTTHH---HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHC--CCCEEEEecCCCCHHHH---HHHHHHHHHHHHhcCCEEEEeC
Confidence 4778888844 36666664333222222 3467788899999999999865
No 313
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=28.78 E-value=48 Score=30.58 Aligned_cols=29 Identities=21% Similarity=0.093 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCcCC
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGLGR 88 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~~~ 88 (266)
.+.++++++-||++|+-||+|=++.+.+.
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~~ 343 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVYK 343 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 48999999999999999999999976544
No 314
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=28.48 E-value=45 Score=26.15 Aligned_cols=53 Identities=13% Similarity=0.183 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCC----CCcccCChH---HHHHHHHHHHhcCCEEEEeccc
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGE----AGAVVPDDG---YLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~----~g~~~~~~~---~l~~l~~l~~~~g~~li~De~~ 83 (266)
++.++++++. .+..|.+---..+ .|.. -..+ ..+++.++|++||+++|+++-.
T Consensus 46 ~~~~~~al~~--Gv~~vqlR~K~~~~~~~~~~l-~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAG--GVDIIQLRDKGSPGELRFGPL-QARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHT--TCSEEEECCTTCHHHHHHCSC-CHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHC--CCCEEEEccCCCCccccccCC-CHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 5778888843 4666665432210 0111 1122 3477999999999999986533
No 315
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=28.19 E-value=1.2e+02 Score=20.70 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
..+....+++. +.+++++-..-++ .+....+..+|+++|++++.-
T Consensus 25 ~~~v~kai~~g-kakLViiA~D~~~-------~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 25 VKEVVKALRKG-EKGLVVIAGDIWP-------ADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHS-CCCEEEECTTCSC-------TTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHcC-CceEEEEeCCCCH-------HHHHHHHHHHHHhcCCcEEEE
Confidence 45556666443 5677776644322 125778889999999998744
No 316
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=27.95 E-value=44 Score=30.10 Aligned_cols=29 Identities=14% Similarity=0.075 Sum_probs=25.7
Q ss_pred CChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 58 PDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 58 ~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
-+.+.++++++-||++|+-||+|-+..+.
T Consensus 206 Gt~~dfk~Lv~~aH~~GI~VilD~V~NH~ 234 (599)
T 3bc9_A 206 GTKGELENAIDALHNNDIKVYFDAVLNHR 234 (599)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcCCC
Confidence 46789999999999999999999998654
No 317
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=27.74 E-value=78 Score=23.76 Aligned_cols=41 Identities=12% Similarity=0.238 Sum_probs=25.9
Q ss_pred CCCEEEEEEccccCCCCc-----------ccCChHHHHHHHHHHHhcCCEEE
Q psy6547 38 NPNICAFMVEPIQGEAGA-----------VVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 38 ~~~~~~i~~~~~~~~~g~-----------~~~~~~~l~~l~~l~~~~g~~li 78 (266)
.|..+.+++.|....... -..-.++-+.+.++|+++|+.++
T Consensus 127 ~P~~~iil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 127 WPTVPKLFISAIHIGSDFGGSFSAVTNGLGYRQSDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp CTTSCEEEEECCCCCSCSBTTBCSSCCTTSCCHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCeEEEEeCcccCCccCCcccccccccchHHHHHHHHHHHHHHHcCCcEE
Confidence 456777777775432211 00015678889999999998765
No 318
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=27.62 E-value=47 Score=26.49 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHhcCCEEEEec
Q psy6547 59 DDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 59 ~~~~l~~l~~l~~~~g~~li~De 81 (266)
..+.++++.+.|+++|+.+|+|-
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35689999999999999999983
No 319
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=27.59 E-value=61 Score=26.00 Aligned_cols=51 Identities=12% Similarity=0.120 Sum_probs=35.1
Q ss_pred CceeecCCC--HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 19 GYNIIPYND--VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 19 ~v~~~~~~d--~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
.--+||+|+ ++-++.+.+. .+++|+++|..+ .++ .-+++.+.|.+||+.++
T Consensus 223 qD~~fd~P~iG~dti~~~~~a--g~~~ivi~~g~s---i~~----~~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 223 QETRVALPTIGVATIHRAARA--GLAGIVGEAGRL---LVV----DREAVIAAADDLGLFVL 275 (283)
T ss_dssp ---CCCCCEECHHHHHHHHHT--TCCEEEEETTBC---EET----THHHHHHHHHHHTCEEE
T ss_pred cccccCCccccHHHHHHHHHc--CCeEEEEcCCCc---EEe----CHHHHHHHHHHcCCEEE
Confidence 334555554 5888888843 588988886543 123 56889999999999887
No 320
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=27.58 E-value=42 Score=27.00 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhcCCEEEEec
Q psy6547 60 DGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.++++.+.|.++|+.+|+|-
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~ 100 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDW 100 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3578899999999999999984
No 321
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.57 E-value=43 Score=26.63 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 61 GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+.++.+.++|.++|+.||.|-..
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEecc
Confidence 46788999999999999988543
No 322
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=27.52 E-value=70 Score=25.48 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.++|++ +++ ...++|-+.+.....+. .+....+..+.+.|.++|++|++-
T Consensus 108 ~~eL~~-~~~-~g~~Gi~~~~~~~~~~~-~~~d~~~~~~~~~a~e~glpv~iH 157 (291)
T 3irs_A 108 MAQMQE-ILD-LGIRIVNLEPGVWATPM-HVDDRRLYPLYAFCEDNGIPVIMM 157 (291)
T ss_dssp HHHHHH-HHH-TTCCCEEECGGGSSSCC-CTTCGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH-HHh-CCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHcCCeEEEe
Confidence 355666 433 35677776654322222 245567888889999999888854
No 323
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.44 E-value=49 Score=26.45 Aligned_cols=22 Identities=18% Similarity=0.400 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHhcCCEEEEe
Q psy6547 59 DDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 59 ~~~~l~~l~~l~~~~g~~li~D 80 (266)
+.+.++++.+.|.++|+.+|+|
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEE
Confidence 3578999999999999999999
No 324
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=26.94 E-value=32 Score=27.62 Aligned_cols=26 Identities=15% Similarity=0.052 Sum_probs=18.6
Q ss_pred CChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 58 PDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 58 ~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+++..+.+|.+.++++++..|+-|.+
T Consensus 196 ps~~~l~~l~~~ik~~~v~~if~e~~ 221 (282)
T 3mfq_A 196 VANSDMIETVNLIIDHNIKAIFTEST 221 (282)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEECBTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 56677777777777777766666555
No 325
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=26.62 E-value=57 Score=31.11 Aligned_cols=31 Identities=16% Similarity=-0.143 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCcCCcC
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGLGRTG 90 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~~~~g 90 (266)
.+.++++++-||++|+-||+|=++.+++..+
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~~~~ 561 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTFDVM 561 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCSS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEccccccccc
Confidence 4899999999999999999999997664433
No 326
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=26.54 E-value=47 Score=26.42 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhcCCEEEEec
Q psy6547 61 GYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De 81 (266)
+.++++.+.|.++|+.+|+|-
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~ 99 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDF 99 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 577889999999999999984
No 327
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=26.54 E-value=48 Score=30.33 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=42.9
Q ss_pred CCHHHHHHHHhc--CCCEEEEEEccccCC---------C---C----------cccCChHHHHHHHHHHHhcCCEEEEec
Q psy6547 26 NDVDALEAKLKS--NPNICAFMVEPIQGE---------A---G----------AVVPDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 26 ~d~~~l~~~l~~--~~~~~~i~~~~~~~~---------~---g----------~~~~~~~~l~~l~~l~~~~g~~li~De 81 (266)
.|+..+.+.|+- .-.+.+|.+.|++.. . | ...-+.+.++++++-||++|+-||+|-
T Consensus 49 Gdl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 49 GDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 477777766632 116789999987421 0 0 112357799999999999999999998
Q ss_pred cccCc
Q psy6547 82 VQTGL 86 (266)
Q Consensus 82 ~~~~~ 86 (266)
+..+.
T Consensus 129 V~NHt 133 (686)
T 1qho_A 129 VPNHS 133 (686)
T ss_dssp CTTEE
T ss_pred ccccc
Confidence 88543
No 328
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=26.40 E-value=1.2e+02 Score=18.94 Aligned_cols=47 Identities=15% Similarity=0.044 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
..+..+.+++ .+.+++++-..- +++....+..+|++++++++.-...
T Consensus 16 ~~~v~kai~~-gkaklViiA~D~--------~~~~~~~i~~lc~~~~Ip~~~v~sk 62 (82)
T 3v7e_A 16 TKQTVKALKR-GSVKEVVVAKDA--------DPILTSSVVSLAEDQGISVSMVESM 62 (82)
T ss_dssp HHHHHHHHTT-TCEEEEEEETTS--------CHHHHHHHHHHHHHHTCCEEEESCH
T ss_pred HHHHHHHHHc-CCeeEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEECCH
Confidence 4555666743 367777765432 3358899999999999999865443
No 329
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=26.33 E-value=63 Score=29.89 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=35.7
Q ss_pred CEEEEEEccccCCCC---------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 40 NICAFMVEPIQGEAG---------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g---------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.+|.+.|+..... ...-+.+.++++++-||++|+-||+|=++..++
T Consensus 277 G~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~ 339 (722)
T 3k1d_A 277 GFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFP 339 (722)
T ss_dssp TCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCC
T ss_pred CCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccC
Confidence 567788888632211 112357899999999999999999999986653
No 330
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=26.32 E-value=49 Score=30.29 Aligned_cols=61 Identities=13% Similarity=0.101 Sum_probs=44.9
Q ss_pred CCHHHHHHHHh--c--CCCEEEEEEccccCCC-------C------------------cccCChHHHHHHHHHHHhcCCE
Q psy6547 26 NDVDALEAKLK--S--NPNICAFMVEPIQGEA-------G------------------AVVPDDGYLKKVRALCSQYNVL 76 (266)
Q Consensus 26 ~d~~~l~~~l~--~--~~~~~~i~~~~~~~~~-------g------------------~~~~~~~~l~~l~~l~~~~g~~ 76 (266)
.|+..+.+.|+ - .-.+.+|.+.|++... | ...-+.+.++++++-||++|+-
T Consensus 52 Gdl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~ 131 (686)
T 1d3c_A 52 GDWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIK 131 (686)
T ss_dssp CCHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred cCHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 47888888886 2 2268999999964210 0 1123578999999999999999
Q ss_pred EEEeccccCc
Q psy6547 77 FIADEVQTGL 86 (266)
Q Consensus 77 li~De~~~~~ 86 (266)
||+|=++.+.
T Consensus 132 VilD~V~NHt 141 (686)
T 1d3c_A 132 VIIDFAPNHT 141 (686)
T ss_dssp EEEEECTTEE
T ss_pred EEEEeCcCcc
Confidence 9999888543
No 331
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=26.03 E-value=50 Score=30.19 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=45.0
Q ss_pred CCHHHHHHHHh--c--CCCEEEEEEccccCCC--------C----------------cccCChHHHHHHHHHHHhcCCEE
Q psy6547 26 NDVDALEAKLK--S--NPNICAFMVEPIQGEA--------G----------------AVVPDDGYLKKVRALCSQYNVLF 77 (266)
Q Consensus 26 ~d~~~l~~~l~--~--~~~~~~i~~~~~~~~~--------g----------------~~~~~~~~l~~l~~l~~~~g~~l 77 (266)
.|+..+.+.|+ - .-.+.+|.+.|++.+. | ...-+.+.++++++-||++|+-|
T Consensus 49 Gdl~gi~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkV 128 (680)
T 1cyg_A 49 GDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKV 128 (680)
T ss_dssp CCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEE
Confidence 58888888886 2 2378999999963210 0 11235789999999999999999
Q ss_pred EEeccccC
Q psy6547 78 IADEVQTG 85 (266)
Q Consensus 78 i~De~~~~ 85 (266)
|+|=+..+
T Consensus 129 ilD~V~NH 136 (680)
T 1cyg_A 129 IIDFAPNH 136 (680)
T ss_dssp EEEECTTE
T ss_pred EEEeCCCC
Confidence 99988854
No 332
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=26.02 E-value=59 Score=30.24 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=35.5
Q ss_pred CEEEEEEccccCCCC---------------cccCChHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 40 NICAFMVEPIQGEAG---------------AVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g---------------~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.+|.+.|++..++ ...-+.+.++++++-||++|+-||+|=++.+++
T Consensus 215 Gvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 277 (755)
T 3aml_A 215 NYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHAS 277 (755)
T ss_dssp TCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBC
T ss_pred CCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 577888887643210 012357899999999999999999999997653
No 333
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=25.98 E-value=54 Score=29.85 Aligned_cols=28 Identities=11% Similarity=-0.031 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.++++++-||++|+-||+|=++.+.+
T Consensus 241 ~~d~~~lv~~~H~~Gi~VilD~V~NH~~ 268 (657)
T 2wsk_A 241 LDEFRDAIKALHKAGIEVILDIVLNHSA 268 (657)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 5899999999999999999999996553
No 334
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=25.96 E-value=53 Score=30.25 Aligned_cols=28 Identities=14% Similarity=-0.050 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.++++++-||++|+-||+|=++.+.+
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 4899999999999999999999996543
No 335
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=25.95 E-value=1.7e+02 Score=20.37 Aligned_cols=61 Identities=7% Similarity=0.089 Sum_probs=45.3
Q ss_pred eEEEEeeCccchHHHHHHHHHHCCceeccC-------C-C-CEEEEeccCCCCHHHHHHHHHHHHHHHHHHh
Q psy6547 200 NTLILSVSAILEVYDVCIKMKDAGLVTKPI-------S-N-NIIRLSPALNITEQELREGLDIIINTINTMA 262 (266)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------~-~-~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~ 262 (266)
.++.+++ ..+...++..+.+.|+.+... + + -.+.++.....+.++|......|.+..++..
T Consensus 43 H~~~F~d--e~~~e~~a~~~~~~Gy~v~~~~~~e~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~lA~~~~ 112 (132)
T 1nxi_A 43 HHLFAED--FDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVNLAEKFD 112 (132)
T ss_dssp EEEEESC--HHHHHHHHHHHHHHTCCCBCCCCBCCSSCSSBEEEEEEEEECSCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCC--HHHHHHHHHHHHHCCCEEEecccccCCCCceeEEEEEEEeccCCHHHHHHHHHHHHHHHHHhC
Confidence 5556665 568899999999998877632 1 1 2567776677888899999999988877653
No 336
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=25.90 E-value=47 Score=27.55 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHhcCCEEEEec
Q psy6547 59 DDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 59 ~~~~l~~l~~l~~~~g~~li~De 81 (266)
..+.++++.+.|.++|+.+|+|-
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDl 107 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEV 107 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35689999999999999999983
No 337
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=25.86 E-value=50 Score=30.18 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=44.8
Q ss_pred CCHHHHHHHHh--c--CCCEEEEEEccccCCC----------------C----------cccCChHHHHHHHHHHHhcCC
Q psy6547 26 NDVDALEAKLK--S--NPNICAFMVEPIQGEA----------------G----------AVVPDDGYLKKVRALCSQYNV 75 (266)
Q Consensus 26 ~d~~~l~~~l~--~--~~~~~~i~~~~~~~~~----------------g----------~~~~~~~~l~~l~~l~~~~g~ 75 (266)
.|+..+.+.|+ - .-.+.+|.+.|++... | ...-+.+.++++++-||++|+
T Consensus 52 Gdl~gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~Gi 131 (683)
T 3bmv_A 52 GDWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNI 131 (683)
T ss_dssp CCHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCC
Confidence 47888888886 2 2268999999964310 0 112357899999999999999
Q ss_pred EEEEeccccCc
Q psy6547 76 LFIADEVQTGL 86 (266)
Q Consensus 76 ~li~De~~~~~ 86 (266)
-||+|=++.+.
T Consensus 132 kVilD~V~NHt 142 (683)
T 3bmv_A 132 KVIIDFAPNHT 142 (683)
T ss_dssp EEEEEECTTEE
T ss_pred EEEEEEccccc
Confidence 99999888543
No 338
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=25.82 E-value=38 Score=30.78 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=42.2
Q ss_pred CHHHHHHHHhc-CC-CEEEEEEccccCCC-C----c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 27 DVDALEAKLKS-NP-NICAFMVEPIQGEA-G----A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 27 d~~~l~~~l~~-~~-~~~~i~~~~~~~~~-g----~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
|+..|.+.|.- .. .+.+|.+.|++... | . ..-+.+.++++++-||++|+-||+|-|+.+.
T Consensus 104 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~NH~ 181 (644)
T 3czg_A 104 TLQGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHT 181 (644)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 56666655522 12 68899999975422 1 1 1125679999999999999999999998654
No 339
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=25.53 E-value=71 Score=21.92 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
++.++++.+.. ++++++.+ |. .-+++.++|+++|+.++-
T Consensus 72 ~~~v~e~~~~g--~k~v~~~~-----G~------~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 72 LSEYNYILSLK--PKRVIFNP-----GT------ENEELEEILSENGIEPVI 110 (122)
T ss_dssp GGGHHHHHHHC--CSEEEECT-----TC------CCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcC--CCEEEECC-----CC------ChHHHHHHHHHcCCeEEC
Confidence 45566666443 45566653 32 126899999999999883
No 340
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=25.44 E-value=76 Score=22.71 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhcCCEEE-Eeccc
Q psy6547 61 GYLKKVRALCSQYNVLFI-ADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li-~De~~ 83 (266)
...+-|.++|.+|+|.|| +|+..
T Consensus 63 ~y~kLveAlC~E~~I~lIkVdd~k 86 (146)
T 3cg6_A 63 IHFTLIQAFCCENDIDIVRVGDVQ 86 (146)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCHH
T ss_pred HHHHHHHHHHhhcCCCeEEeCchh
Confidence 366778899999999999 77665
No 341
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=25.30 E-value=1.1e+02 Score=24.98 Aligned_cols=51 Identities=12% Similarity=0.052 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCC--CCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGE--AGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~--~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
.++|++.+++ ...++|-+.+.... .+...+..+.+..+.+.|.++|++|++
T Consensus 125 ~~eL~r~~~~-~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~i 177 (350)
T 2gwg_A 125 IPELEKCVKE-YGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMI 177 (350)
T ss_dssp HHHHHHHHHT-SCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhc-cCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 5778887743 35777776654211 111235667788999999999999885
No 342
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=24.99 E-value=53 Score=26.08 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhcCCEEEEec
Q psy6547 61 GYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De 81 (266)
+.++++.+.|.++|+.+|+|-
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 577889999999999999984
No 343
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=24.89 E-value=52 Score=27.26 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcCCEEEEec
Q psy6547 61 GYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De 81 (266)
+.++++.+.|.++|+.+|+|=
T Consensus 121 ~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 121 ELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 467899999999999999983
No 344
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.88 E-value=1.3e+02 Score=22.64 Aligned_cols=43 Identities=12% Similarity=0.113 Sum_probs=30.5
Q ss_pred CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 26 NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 26 ~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
.|.++|+++++. +...+++- +|.+. .++++.+.++++|-.+++
T Consensus 17 r~~~~l~~al~s--~~~~ifll-----~g~i~----~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILEL--DLTYMVML-----ETHVA----QLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTS--SCCEEEEC-----SEETT----THHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHcC--CCCEEEEe-----cCcHH----HHHHHHHHHHHcCCeEEE
Confidence 479999999943 34455544 23344 899999999999966664
No 345
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=24.47 E-value=42 Score=30.40 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=41.4
Q ss_pred CHHHHHHHHhc-CC-CEEEEEEccccCCC-C----c-----------ccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 27 DVDALEAKLKS-NP-NICAFMVEPIQGEA-G----A-----------VVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 27 d~~~l~~~l~~-~~-~~~~i~~~~~~~~~-g----~-----------~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
|+..+.+.|+- .+ .+.+|.+.|++... | . ..-+.+.++++++-||++|+-||+|=|..+.
T Consensus 111 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~NH~ 188 (628)
T 1g5a_A 111 DLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHT 188 (628)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 55555554422 12 58899999975432 1 1 0125678999999999999999999998544
No 346
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=24.37 E-value=53 Score=27.21 Aligned_cols=53 Identities=15% Similarity=0.014 Sum_probs=31.8
Q ss_pred CHHHHHHHHhcCC--CEEEEEEccccCCCCcccCCh---HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 27 DVDALEAKLKSNP--NICAFMVEPIQGEAGAVVPDD---GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 27 d~~~l~~~l~~~~--~~~~i~~~~~~~~~g~~~~~~---~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+.++++.+.++.. -+|+-+--+ . .| ..+++ +.++++.+.|+++|+.+|+|--.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~--~-~~-~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIG--E-NG-YATNPEVKDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESS--S-SS-TTTCTTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeC--C-CC-CccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4567776653322 455544321 1 11 11222 47888899999999999998444
No 347
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=24.15 E-value=1.4e+02 Score=21.02 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCEEEEEEcccc-CCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 30 ALEAKLKSNPNICAFMVEPIQ-GEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 30 ~l~~~l~~~~~~~~i~~~~~~-~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.+-.+|+ ..++.+|+-.+.+ +.... ..+...|++.|-.|+++++..
T Consensus 65 ~I~d~I~-~geIdlVInt~~pl~~~~h----~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 65 QMGARVA-EGRILAVIFFRDPLTAQPH----EPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHH-TTCEEEEEEECCTTTCCTT----SCCSHHHHHHHHHHTCCEECS
T ss_pred hHHHHHH-CCCccEEEEccCcccCCCc----cchHHHHHHHHHHcCCCeEcC
Confidence 4666674 4478888877642 22221 338899999999999998854
No 348
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.77 E-value=1.4e+02 Score=21.57 Aligned_cols=40 Identities=5% Similarity=-0.017 Sum_probs=23.3
Q ss_pred CCEEEEEEccccCCCCccc-------CChHHHHHHHHHHHhcCCEEE
Q psy6547 39 PNICAFMVEPIQGEAGAVV-------PDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 39 ~~~~~i~~~~~~~~~g~~~-------~~~~~l~~l~~l~~~~g~~li 78 (266)
+..+.+++.+......... .-...-+.+.++|+++|+.+|
T Consensus 113 ~~~~vil~~~~p~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~v~~i 159 (204)
T 3p94_A 113 NHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYV 159 (204)
T ss_dssp TTCEEEEECCCCCSCBTTBTTCCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEeCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4667777776432211110 013455668889999998766
No 349
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=23.68 E-value=1.1e+02 Score=23.24 Aligned_cols=11 Identities=27% Similarity=0.537 Sum_probs=5.2
Q ss_pred EEEEeccccCc
Q psy6547 76 LFIADEVQTGL 86 (266)
Q Consensus 76 ~li~De~~~~~ 86 (266)
++.++-++.++
T Consensus 141 ~vl~~sv~pg~ 151 (228)
T 1h1y_A 141 LVLVMTVEPGF 151 (228)
T ss_dssp EEEEESSCTTC
T ss_pred EEEEEeecCCC
Confidence 44455555433
No 350
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=23.45 E-value=56 Score=26.23 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcCCEEEEec
Q psy6547 61 GYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De 81 (266)
+.++++.+.|.++|+.+|+|-
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 577889999999999999983
No 351
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=23.42 E-value=1.2e+02 Score=24.95 Aligned_cols=61 Identities=15% Similarity=0.154 Sum_probs=37.5
Q ss_pred CCceeec-C---CCHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 18 PGYNIIP-Y---NDVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 18 ~~v~~~~-~---~d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
++|..+. | -+.+.++.+++ ...++++++..- .|. .+..+++.|.+.. +.|++||.= .++..
T Consensus 221 ~~V~il~~~pG~~~~~~l~a~~~--~g~~GiVle~~G--~Gn--~p~~~~~~l~~a~-~~Gi~VV~~-Src~~ 285 (334)
T 3nxk_A 221 PKVDILYSYSNDGSGVAAKALFE--HGTKGIVVAGSG--AGS--IHKNQKDVLKELL-KKGLKVVVS-SRVVA 285 (334)
T ss_dssp CCEEEEECCTTCCHHHHHHHHHH--TTCCEEEEEEBT--TTB--CCHHHHHHHHHHH-TTTCEEEEE-ESSSB
T ss_pred CcEEEEEEeCCCCCHHHHHHHHh--CCCCEEEEeeEC--CCC--CcHHHHHHHHHHH-HCCCEEEEe-CCCCC
Confidence 4454443 2 35677888884 358899988653 233 3467777777766 568877643 34433
No 352
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=23.39 E-value=1.9e+02 Score=23.28 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=32.4
Q ss_pred CHHHHHHHHhc---CCCEE--EEEEccccCCCCccc-CC-----hHHHHHHHHHHHhcCCEEEE
Q psy6547 27 DVDALEAKLKS---NPNIC--AFMVEPIQGEAGAVV-PD-----DGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 27 d~~~l~~~l~~---~~~~~--~i~~~~~~~~~g~~~-~~-----~~~l~~l~~l~~~~g~~li~ 79 (266)
+++++...+++ ...++ +|++.+.+.....-. .+ .+....|.++|+++|+++++
T Consensus 163 ~~~~i~~~i~~l~~~~~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~ 226 (315)
T 3bh0_A 163 SVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 226 (315)
T ss_dssp BHHHHHHHHHHHHHTSSSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 56776655532 22466 888888754432110 11 23466788889999988875
No 353
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=23.28 E-value=1.6e+02 Score=23.35 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=40.5
Q ss_pred ceeecCCCHHHHHHHHhc-CCCEEEEEEccccCCCCcccCChH-HHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 20 YNIIPYNDVDALEAKLKS-NPNICAFMVEPIQGEAGAVVPDDG-YLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 20 v~~~~~~d~~~l~~~l~~-~~~~~~i~~~~~~~~~g~~~~~~~-~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
++-.+.+|.++..+++++ .+.+..+=+....-.. ...+ .+++|.++++++|..|+.|-=..+.+
T Consensus 33 iVALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~----~G~~~~v~~L~~l~~~~g~~IflDlK~~DIp 98 (267)
T 3gdm_A 33 CASLDVRTTKELLELVEALGPKICLLKTHVDILTD----FSMEGTVKPLKALSAKYNFLLFEDRRFADIG 98 (267)
T ss_dssp EEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCSS----CCTTTTHHHHHHHHHHHTCEEEEEEEECCCH
T ss_pred EEEeCcCCHHHHHHHHHHhCCcCcEEEECHHHHHh----cCHHHHHHHHHHHHhhcCCeEEEEeccccch
Confidence 455667788887777765 3344444444322111 2234 67788888888999999996665543
No 354
>2dn5_A General transcription factor II-I repeat domain- containing protein 1; structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.19 E-value=1.2e+02 Score=19.67 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=19.5
Q ss_pred CHHHHHHHHhcCCCEEEEEEccccC
Q psy6547 27 DVDALEAKLKSNPNICAFMVEPIQG 51 (266)
Q Consensus 27 d~~~l~~~l~~~~~~~~i~~~~~~~ 51 (266)
++..||+.|+....+..++++....
T Consensus 62 ~I~~Le~IL~~~~~I~f~ii~~l~~ 86 (89)
T 2dn5_A 62 DIHRLEKILKAREHVRMVIINQSGP 86 (89)
T ss_dssp CHHHHHHHHTTTTTCEEEESSCCCC
T ss_pred cHHHHHHHHhhccCceEEEEecccc
Confidence 6899999997666888888776543
No 355
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=23.10 E-value=56 Score=26.48 Aligned_cols=22 Identities=23% Similarity=0.001 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHhcCCEEEEec
Q psy6547 60 DGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.++++.+.|+++|+.+|+|-
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 5688999999999999999984
No 356
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=23.05 E-value=74 Score=29.35 Aligned_cols=27 Identities=19% Similarity=-0.012 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
.+.++++++-||++|+-||+|=++.+.
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~NH~ 292 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYNHT 292 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 489999999999999999999998654
No 357
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=23.05 E-value=1.5e+02 Score=23.48 Aligned_cols=24 Identities=13% Similarity=0.095 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHHhcCCEEEEec
Q psy6547 58 PDDGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 58 ~~~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.+.+.++.+.++++|+++++|-
T Consensus 144 ~~~~~~~~~~~~a~~~~~~v~~D~ 167 (309)
T 3umo_A 144 VKLEKLTQLISAAQKQGIRCIVDS 167 (309)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEC
Confidence 356788999999999999999994
No 358
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=22.62 E-value=81 Score=26.64 Aligned_cols=59 Identities=8% Similarity=0.013 Sum_probs=32.3
Q ss_pred CCHHHHHHHHhc---CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy6547 26 NDVDALEAKLKS---NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 84 (266)
Q Consensus 26 ~d~~~l~~~l~~---~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~~ 84 (266)
.++++++.+++. ..+...++++-..+.........-.+..+..+.+.++++|++|-+|+
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~ 321 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHS 321 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCC
Confidence 356666665532 23334555553111111111112267777777777899999998884
No 359
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=22.50 E-value=1e+02 Score=22.47 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=23.3
Q ss_pred CEEEEEEccccCCCCcc----cCChHHHHHHHHHHHhcCCEEE
Q psy6547 40 NICAFMVEPIQGEAGAV----VPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 40 ~~~~i~~~~~~~~~g~~----~~~~~~l~~l~~l~~~~g~~li 78 (266)
..+.++++|...+.... ..-...-+.+.++|+++|+.+|
T Consensus 130 ~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 130 VREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp SSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 67888887643332110 0113456778888999997654
No 360
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.44 E-value=46 Score=15.55 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=7.9
Q ss_pred ccHHHHHHHHHHHHH
Q psy6547 160 ENMIENAYKMGEIFR 174 (266)
Q Consensus 160 ~~~~~~~~~~~~~l~ 174 (266)
++++++++++++.++
T Consensus 11 edlqerlrklrkklr 25 (27)
T 3twe_A 11 EDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 445555555555443
No 361
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=22.34 E-value=26 Score=26.47 Aligned_cols=24 Identities=17% Similarity=0.043 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhcCCEEEEeccccC
Q psy6547 62 YLKKVRALCSQYNVLFIADEVQTG 85 (266)
Q Consensus 62 ~l~~l~~l~~~~g~~li~De~~~~ 85 (266)
.+......+...+.+||+||+|.-
T Consensus 76 ~~~~~~~~~~~~~~vliIDEAq~l 99 (199)
T 2r2a_A 76 DMYEWIKKPENIGSIVIVDEAQDV 99 (199)
T ss_dssp GHHHHTTSGGGTTCEEEETTGGGT
T ss_pred HHHHHhhccccCceEEEEEChhhh
Confidence 344333224556999999999963
No 362
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=22.33 E-value=1.5e+02 Score=20.75 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 29 DALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 29 ~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.+....+++ .+.+++++-..-+ +.+....+..+|+++|++++.-
T Consensus 38 ~~v~kai~~-gkakLViiA~D~~-------p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 38 NEATKTLNR-GISEFIIMAADCE-------PIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHH-TCEEEEEEETTCS-------SGGGGTHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHh-CCCeEEEEeCCCC-------HHHHHHHHHHHHHhcCCCEEEE
Confidence 444455533 3567777654332 1235677789999999997643
No 363
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=22.14 E-value=2e+02 Score=19.96 Aligned_cols=43 Identities=9% Similarity=0.092 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 29 DALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 29 ~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
++..+.+++ .+.+++++-..-+ +......+..+|++++++++.
T Consensus 47 ~~v~kal~~-gkaklViiA~D~~-------~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 47 NEATKALNR-GIAEIVLLAADAE-------PLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHHHHHHT-TCEEEEEEETTCS-------CHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc-CCCeEEEEecCCC-------hHHHHhHHHHHHHhcCCcEEE
Confidence 444555533 3566666654332 122458999999999999873
No 364
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A
Probab=21.98 E-value=1.8e+02 Score=21.82 Aligned_cols=66 Identities=11% Similarity=0.016 Sum_probs=40.3
Q ss_pred CCCceeecCC--CHHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 17 MPGYNIIPYN--DVDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 17 ~~~v~~~~~~--d~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+.+++.+..| -+.+++++++..-.+.++-.......+|.. +...-+.+...+++..|.++++|+.=
T Consensus 9 m~~iv~aT~N~~K~~E~~~iL~~~~~i~v~~~~~~~~E~~~t-f~enA~~KA~~a~~~~g~pvlaDDSG 76 (196)
T 2car_A 9 GKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGE-PDEISIQKCQEAVRQVQGPVLVEDTC 76 (196)
T ss_dssp TCEEEEECSCHHHHHHHHHHHCTTCCSEEEEECCCCCCBCSC-HHHHHHHHHHHHHHHHSSCEEEEEEE
T ss_pred cceEEEEcCCHHHHHHHHHHcCCCCCcEEEECCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCEEeeccE
Confidence 3468888887 478888888431123443332112234433 44555666677788889999999654
No 365
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=21.96 E-value=1.4e+02 Score=20.10 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=36.5
Q ss_pred cccCCCCCCceeecCCC-----HHHHHHHHhcCC-CEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 11 NEFGPHMPGYNIIPYND-----VDALEAKLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 11 ~~~~~~~~~v~~~~~~d-----~~~l~~~l~~~~-~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+.|..-+.++..+.+.. .++.+. +++.. ++.++-+-...+ + +.+.+.+++++++.+++++|.+
T Consensus 7 ~~~g~~g~dv~iv~~Gs~~~~a~eA~~~-L~~~Gi~v~vi~~r~~~P------~---d~~~l~~~~~~~~~vvvvE~~~ 75 (118)
T 3ju3_A 7 VLIGEKEADITFVTWGSQKGPILDVIED-LKEEGISANLLYLKMFSP------F---PTEFVKNVLSSANLVIDVESNY 75 (118)
T ss_dssp EEESCSSCSEEEEEEGGGHHHHHHHHHH-HHHTTCCEEEEEECSSCS------C---CHHHHHHHHTTCSCCCCCCCCC
T ss_pred eeeCCCCCCEEEEEECccHHHHHHHHHH-HHHCCCceEEEEECeEec------C---CHHHHHHHHcCCCEEEEEECCC
Confidence 44566677888887764 233333 32332 455544544332 2 4456677778888778887765
No 366
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=21.95 E-value=63 Score=27.38 Aligned_cols=22 Identities=23% Similarity=0.222 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHhcCCEEEEec
Q psy6547 60 DGYLKKVRALCSQYNVLFIADE 81 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De 81 (266)
.+.++++++.|+++|+.+|+|=
T Consensus 112 ~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 112 VQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 5799999999999999999994
No 367
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=21.89 E-value=70 Score=27.35 Aligned_cols=51 Identities=18% Similarity=0.090 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCEEEEEEcccc--CCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQ--GEAGAVVPDDGYLKKVRALCSQYNVLFIAD 80 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~--~~~g~~~~~~~~l~~l~~l~~~~g~~li~D 80 (266)
.++|++.++ . ..++|.+.|.. +..|...++...+..+.+.|.+.|++|.+-
T Consensus 178 ~~EL~r~~~-~-G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH 230 (423)
T 4dzi_A 178 VEEVDFVLA-R-GAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFH 230 (423)
T ss_dssp HHHHHHHHH-T-TCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHH-c-CCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEe
Confidence 456777774 3 57788887643 233445566778999999999999998854
No 368
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=21.83 E-value=95 Score=24.52 Aligned_cols=48 Identities=13% Similarity=0.092 Sum_probs=31.1
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 79 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~ 79 (266)
+++|++.++ ....++|-+.+... +. .+..+.++.+.++|.++|++|++
T Consensus 106 ~~el~~~~~-~~g~~gi~~~~~~~--~~-~~~~~~~~~~~~~a~~~~lpv~i 153 (307)
T 2f6k_A 106 VKTVQQALD-QDGALGVTVPTNSR--GL-YFGSPVLERVYQELDARQAIVAL 153 (307)
T ss_dssp HHHHHHHHH-TSCCSEEEEESEET--TE-ETTCGGGHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHh-ccCCcEEEEeccCC--CC-CCCcHhHHHHHHHHHHcCCeEEE
Confidence 455666663 23567776655432 22 24456788899999999998884
No 369
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.79 E-value=1.2e+02 Score=17.11 Aligned_cols=31 Identities=6% Similarity=0.231 Sum_probs=22.7
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
++++......+.++-.++.+.|-+++.+..+
T Consensus 5 ~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg 35 (63)
T 2x4k_A 5 IVNVKLLEGRSDEQLKNLVSEVTDAVEKTTG 35 (63)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4556555566888888888888888877644
No 370
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.79 E-value=89 Score=28.96 Aligned_cols=27 Identities=7% Similarity=-0.010 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCc
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGL 86 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~ 86 (266)
.+.++++++.||++|+-||+|=++.++
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 298 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHT 298 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 689999999999999999999999654
No 371
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=21.62 E-value=67 Score=26.18 Aligned_cols=51 Identities=14% Similarity=0.029 Sum_probs=35.1
Q ss_pred CHHHHHHHHhc--CCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhc---CCEEEE
Q psy6547 27 DVDALEAKLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY---NVLFIA 79 (266)
Q Consensus 27 d~~~l~~~l~~--~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~---g~~li~ 79 (266)
|.+.++++++. ...+..+++....+... .++.+..+++.+.+.+. .++||+
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~--~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFY--ALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGG--GSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcc--cCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 77888877754 34678888777665543 36788888888877654 367764
No 372
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=21.32 E-value=1.9e+02 Score=20.03 Aligned_cols=33 Identities=6% Similarity=-0.050 Sum_probs=27.3
Q ss_pred CEEEEeccCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy6547 232 NIIRLSPALNITEQELREGLDIIINTINTMAAK 264 (266)
Q Consensus 232 ~~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~~ 264 (266)
.++++..+...+.++.+.+++.+.+++.+..++
T Consensus 22 P~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgK 54 (133)
T 3fwt_A 22 PFLQTIVSVSLDDQKRANLSAAYGMICREELGK 54 (133)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 568888888888888899999999988887654
No 373
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=21.25 E-value=69 Score=25.69 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCCEEEEeccc
Q psy6547 61 GYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 61 ~~l~~l~~l~~~~g~~li~De~~ 83 (266)
+.++++.+.|+++|+.+|+|--+
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 45888999999999999999433
No 374
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=20.93 E-value=1.9e+02 Score=27.30 Aligned_cols=48 Identities=15% Similarity=0.143 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
++.++++++. ..++++++-+. | ++....+++.++|+++|+.||==++.
T Consensus 579 ~~av~ea~~~-~Gvk~~Viis~----G---f~e~~~~~l~~~A~~~g~rliGPNc~ 626 (829)
T 3pff_A 579 YDSTMETMNY-AQIRTIAIIAE----G---IPEALTRKLIKKADQKGVTIIGPATV 626 (829)
T ss_dssp HHHHHHHTTS-TTCCEEEECCS----C---CCHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHhh-CCCCEEEEeCC----C---CCHHHHHHHHHHHHHcCCEEEcCCCc
Confidence 5667777731 35676665432 1 33457789999999999988844443
No 375
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=20.82 E-value=74 Score=29.27 Aligned_cols=60 Identities=8% Similarity=0.055 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHhc--CCCEEEEEEccccCCC------------------C----------------cccCChHHHHHHHH
Q psy6547 25 YNDVDALEAKLKS--NPNICAFMVEPIQGEA------------------G----------------AVVPDDGYLKKVRA 68 (266)
Q Consensus 25 ~~d~~~l~~~l~~--~~~~~~i~~~~~~~~~------------------g----------------~~~~~~~~l~~l~~ 68 (266)
..|+..+.+.|.- .-.+.+|.+.|++..+ | ..+-+.+.++++++
T Consensus 249 ~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~ 328 (695)
T 3zss_A 249 HGTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVT 328 (695)
T ss_dssp SCCHHHHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHH
Confidence 4466666666532 2268899999975432 1 01124689999999
Q ss_pred HHHhcCCEEEEecccc
Q psy6547 69 LCSQYNVLFIADEVQT 84 (266)
Q Consensus 69 l~~~~g~~li~De~~~ 84 (266)
-|+++|+-||+|-++.
T Consensus 329 ~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 329 EAGKLGLEIALDFALQ 344 (695)
T ss_dssp HHHHTTCEEEEEECCE
T ss_pred HHHHCCCEEEEEeecc
Confidence 9999999999998884
No 376
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=20.72 E-value=63 Score=29.22 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCcC
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQTGLG 87 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~~~~~ 87 (266)
.+.++++++-||++|+-||+|=++.+++
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~nH~~ 208 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPRTAA 208 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCc
Confidence 4899999999999999999999986553
No 377
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=20.57 E-value=1.2e+02 Score=17.66 Aligned_cols=19 Identities=11% Similarity=0.275 Sum_probs=15.6
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy6547 242 ITEQELREGLDIIINTINT 260 (266)
Q Consensus 242 ~t~~~i~~~~~~l~~~~~~ 260 (266)
.|+|+.++++++|+++++.
T Consensus 5 lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHc
Confidence 5788899999999888754
No 378
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=20.55 E-value=70 Score=27.12 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccc
Q psy6547 60 DGYLKKVRALCSQYNVLFIADEVQ 83 (266)
Q Consensus 60 ~~~l~~l~~l~~~~g~~li~De~~ 83 (266)
.+.++++++.|+++|+.+|+|--+
T Consensus 113 l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 113 ESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999443
No 379
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=20.41 E-value=1.2e+02 Score=26.50 Aligned_cols=41 Identities=10% Similarity=0.124 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCEEEEEEccccCCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy6547 28 VDALEAKLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 78 (266)
Q Consensus 28 ~~~l~~~l~~~~~~~~i~~~~~~~~~g~~~~~~~~l~~l~~l~~~~g~~li 78 (266)
++.++++.++ .+++|++. .| ++.+..+++.++|+++|+.++
T Consensus 50 ~~~v~e~~~~--Gv~~viis-----~G---f~~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 50 AELANQALDR--NLNVMMFS-----DN---VTLEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp HHHHHHHHHT--TCEEEECC-----CC---CCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhc--CCCEEEEC-----CC---CCHHHHHHHHHHHHHcCCEEE
Confidence 5677777744 46644443 22 235688899999999999888
No 380
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=20.35 E-value=1.4e+02 Score=17.46 Aligned_cols=31 Identities=6% Similarity=0.096 Sum_probs=24.0
Q ss_pred EEEEeccC---CCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 233 IIRLSPAL---NITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 233 ~iR~~~~~---~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
++++.+.- ..|.++-+++.+.|-+.+.+..+
T Consensus 2 ~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~lg 35 (67)
T 3m21_A 2 FINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLN 35 (67)
T ss_dssp EEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHC
Confidence 45666555 67999999999999998877654
No 381
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=20.26 E-value=1.4e+02 Score=17.34 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=23.6
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHHHHhh
Q psy6547 233 IIRLSPALNITEQELREGLDIIINTINTMAA 263 (266)
Q Consensus 233 ~iR~~~~~~~t~~~i~~~~~~l~~~~~~~~~ 263 (266)
++++.+.-.-|.++-+++.+.|-+++.+..+
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg 32 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHETLG 32 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4566555567899999999999988887543
Done!