Query psy6548
Match_columns 242
No_of_seqs 118 out of 1070
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 20:48:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6548.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6548hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 100.0 3.8E-39 1.3E-43 276.9 24.3 217 19-237 224-455 (456)
2 4e3q_A Pyruvate transaminase; 100.0 7.8E-39 2.7E-43 276.0 23.2 219 19-239 234-470 (473)
3 1z7d_A Ornithine aminotransfer 100.0 1.8E-37 6.2E-42 266.4 26.7 236 3-239 192-431 (433)
4 2oat_A Ornithine aminotransfer 100.0 4.1E-37 1.4E-41 264.6 27.6 233 3-236 203-438 (439)
5 3i5t_A Aminotransferase; pyrid 100.0 1.7E-37 5.7E-42 269.5 24.7 219 20-240 220-457 (476)
6 3hmu_A Aminotransferase, class 100.0 1.8E-37 6.1E-42 269.0 22.3 217 20-238 222-453 (472)
7 4ao9_A Beta-phenylalanine amin 100.0 4.1E-37 1.4E-41 263.4 21.9 228 4-239 199-448 (454)
8 3nx3_A Acoat, acetylornithine 100.0 1.5E-36 5E-41 257.5 24.9 231 3-236 160-394 (395)
9 3tfu_A Adenosylmethionine-8-am 100.0 4.3E-37 1.5E-41 265.6 21.2 227 10-239 218-455 (457)
10 3gju_A Putative aminotransfera 100.0 1.2E-36 4.1E-41 263.2 23.8 220 20-239 220-458 (460)
11 3n5m_A Adenosylmethionine-8-am 100.0 1.4E-36 4.8E-41 262.1 23.8 230 5-236 185-451 (452)
12 4ffc_A 4-aminobutyrate aminotr 100.0 2E-36 6.9E-41 261.3 24.2 222 17-240 221-452 (453)
13 3dod_A Adenosylmethionine-8-am 100.0 1.3E-36 4.6E-41 262.0 22.3 228 11-240 196-446 (448)
14 2pb2_A Acetylornithine/succiny 100.0 9.3E-36 3.2E-40 254.8 22.6 233 4-238 183-419 (420)
15 4a6r_A Omega transaminase; tra 100.0 3.4E-36 1.2E-40 260.2 19.3 219 20-239 218-451 (459)
16 3oks_A 4-aminobutyrate transam 100.0 2.1E-35 7.2E-40 254.8 23.9 216 19-236 225-450 (451)
17 3l44_A Glutamate-1-semialdehyd 100.0 1.7E-35 5.7E-40 254.1 21.6 233 3-240 180-433 (434)
18 3dxv_A Alpha-amino-epsilon-cap 100.0 4.7E-35 1.6E-39 251.6 23.5 231 4-238 169-426 (439)
19 3ruy_A Ornithine aminotransfer 100.0 1.9E-34 6.6E-39 244.2 26.3 227 4-234 164-391 (392)
20 3i4j_A Aminotransferase, class 100.0 4.2E-35 1.4E-39 251.3 22.4 217 20-237 189-428 (430)
21 1zod_A DGD, 2,2-dialkylglycine 100.0 1.7E-34 5.9E-39 247.6 19.3 224 12-237 189-432 (433)
22 4adb_A Succinylornithine trans 100.0 1.2E-33 4.3E-38 240.0 24.3 236 3-240 164-403 (406)
23 2eo5_A 419AA long hypothetical 100.0 7.8E-34 2.7E-38 242.8 23.2 208 20-237 211-418 (419)
24 4e77_A Glutamate-1-semialdehyd 100.0 7.5E-34 2.6E-38 243.5 22.9 228 4-236 179-428 (429)
25 3fq8_A Glutamate-1-semialdehyd 100.0 7.2E-34 2.5E-38 243.4 22.1 228 4-236 178-426 (427)
26 2cjg_A L-lysine-epsilon aminot 100.0 1.9E-33 6.4E-38 242.5 24.8 212 19-237 229-448 (449)
27 3k28_A Glutamate-1-semialdehyd 100.0 2.4E-34 8.1E-39 246.7 18.1 229 3-237 178-427 (429)
28 2epj_A Glutamate-1-semialdehyd 100.0 2.1E-33 7.1E-38 241.1 22.9 230 4-238 182-432 (434)
29 1s0a_A Adenosylmethionine-8-am 100.0 1.7E-33 5.7E-38 241.3 22.0 226 10-238 189-425 (429)
30 2ord_A Acoat, acetylornithine 100.0 4.1E-33 1.4E-37 236.4 23.0 229 4-236 165-396 (397)
31 1sff_A 4-aminobutyrate aminotr 100.0 7.1E-33 2.4E-37 236.9 23.8 217 20-238 198-425 (426)
32 3a8u_X Omega-amino acid--pyruv 100.0 1.6E-33 5.5E-38 242.8 19.3 216 20-237 218-447 (449)
33 4a0g_A Adenosylmethionine-8-am 100.0 6.7E-34 2.3E-38 259.7 16.4 215 19-237 592-828 (831)
34 1vef_A Acetylornithine/acetyl- 100.0 3.7E-32 1.3E-36 230.3 23.9 226 4-234 167-394 (395)
35 2e7u_A Glutamate-1-semialdehyd 100.0 1.3E-32 4.5E-37 235.4 21.2 224 4-233 178-423 (424)
36 1ohv_A 4-aminobutyrate aminotr 100.0 1.4E-32 4.8E-37 238.3 19.2 208 21-237 258-471 (472)
37 2cy8_A D-phgat, D-phenylglycin 100.0 2.2E-32 7.6E-37 235.9 20.1 228 4-239 180-437 (453)
38 2eh6_A Acoat, acetylornithine 100.0 2.7E-31 9.2E-36 223.4 25.6 220 4-233 154-374 (375)
39 2yky_A Beta-transaminase; tran 100.0 2.5E-35 8.6E-40 253.8 0.0 227 4-238 212-461 (465)
40 2w8t_A SPT, serine palmitoyltr 99.9 6.7E-27 2.3E-31 200.2 18.2 226 3-240 171-418 (427)
41 3l8a_A METC, putative aminotra 99.9 1.2E-27 4.2E-32 204.4 11.9 219 11-235 182-420 (421)
42 3op7_A Aminotransferase class 99.9 2.9E-26 1E-30 192.7 16.6 222 11-239 143-373 (375)
43 3kki_A CAI-1 autoinducer synth 99.9 3.1E-26 1.1E-30 194.9 14.8 219 4-236 167-403 (409)
44 3aow_A Putative uncharacterize 99.9 7.2E-26 2.5E-30 195.0 16.2 215 20-238 215-446 (448)
45 3tqx_A 2-amino-3-ketobutyrate 99.9 1.1E-25 3.9E-30 190.4 15.9 223 3-237 150-396 (399)
46 2zc0_A Alanine glyoxylate tran 99.9 4.7E-25 1.6E-29 187.3 18.3 213 20-238 173-405 (407)
47 3dzz_A Putative pyridoxal 5'-p 99.9 2.5E-25 8.6E-30 187.7 15.7 222 10-237 147-389 (391)
48 1gd9_A Aspartate aminotransfer 99.9 3.9E-25 1.3E-29 186.7 16.4 220 11-237 149-386 (389)
49 1yiz_A Kynurenine aminotransfe 99.9 2.2E-25 7.4E-30 190.8 14.7 219 10-235 170-427 (429)
50 3h14_A Aminotransferase, class 99.9 5E-25 1.7E-29 186.3 16.6 214 21-240 161-385 (391)
51 2zyj_A Alpha-aminodipate amino 99.9 8.7E-26 3E-30 191.3 11.3 223 11-238 150-394 (397)
52 3b46_A Aminotransferase BNA3; 99.9 9E-25 3.1E-29 188.1 17.2 216 10-232 189-442 (447)
53 1vp4_A Aminotransferase, putat 99.9 1.7E-25 5.6E-30 191.4 12.5 215 21-240 187-421 (425)
54 2dou_A Probable N-succinyldiam 99.9 8.2E-26 2.8E-30 190.1 10.4 207 19-234 156-375 (376)
55 3g0t_A Putative aminotransfera 99.9 6.8E-25 2.3E-29 187.9 16.1 218 11-236 170-436 (437)
56 1fc4_A 2-amino-3-ketobutyrate 99.9 1.1E-24 3.7E-29 184.7 16.6 223 4-238 153-398 (401)
57 3qgu_A LL-diaminopimelate amin 99.9 5.8E-25 2E-29 189.2 14.9 227 4-239 189-442 (449)
58 2gb3_A Aspartate aminotransfer 99.9 1.6E-24 5.3E-29 184.4 17.4 217 12-239 164-404 (409)
59 1j32_A Aspartate aminotransfer 99.9 5.4E-25 1.9E-29 185.8 14.1 221 11-237 152-387 (388)
60 2r2n_A Kynurenine/alpha-aminoa 99.9 1.6E-24 5.4E-29 185.4 16.8 213 20-237 189-424 (425)
61 1v2d_A Glutamine aminotransfer 99.9 1E-24 3.5E-29 183.7 15.4 216 11-239 141-373 (381)
62 2x5d_A Probable aminotransfera 99.9 7.1E-25 2.4E-29 186.7 14.3 212 19-238 170-399 (412)
63 4dq6_A Putative pyridoxal phos 99.9 1.3E-24 4.4E-29 183.4 15.2 216 11-234 154-390 (391)
64 1d2f_A MALY protein; aminotran 99.9 2.7E-24 9.1E-29 181.7 17.1 222 10-237 149-389 (390)
65 3nra_A Aspartate aminotransfer 99.9 6.8E-26 2.3E-30 192.3 7.1 222 11-238 168-406 (407)
66 3piu_A 1-aminocyclopropane-1-c 99.9 1.1E-24 3.8E-29 186.8 14.7 211 20-238 190-433 (435)
67 1o4s_A Aspartate aminotransfer 99.9 6.4E-25 2.2E-29 185.7 12.8 214 11-235 163-387 (389)
68 3ffh_A Histidinol-phosphate am 99.9 4.1E-24 1.4E-28 178.8 17.6 214 4-233 132-362 (363)
69 3fvs_A Kynurenine--oxoglutarat 99.9 2.2E-24 7.5E-29 184.0 16.1 219 11-236 163-421 (422)
70 3jtx_A Aminotransferase; NP_28 99.9 1.4E-24 4.9E-29 183.6 14.8 205 20-234 167-395 (396)
71 2o1b_A Aminotransferase, class 99.9 3.1E-25 1.1E-29 188.6 10.5 210 19-236 179-402 (404)
72 3ezs_A Aminotransferase ASPB; 99.9 1.4E-24 4.8E-29 182.4 14.1 202 20-236 153-374 (376)
73 3fdb_A Beta C-S lyase, putativ 99.9 1.8E-25 6.2E-30 187.8 8.7 226 4-236 129-375 (377)
74 1c7n_A Cystalysin; transferase 99.9 3.5E-24 1.2E-28 181.5 16.5 223 11-239 152-395 (399)
75 2z61_A Probable aspartate amin 99.9 6.4E-25 2.2E-29 184.3 11.9 217 4-235 137-369 (370)
76 1iay_A ACC synthase 2, 1-amino 99.9 3E-24 1E-28 183.7 16.0 209 20-236 187-426 (428)
77 1b5p_A Protein (aspartate amin 99.9 4.2E-24 1.4E-28 180.4 16.7 218 11-235 153-383 (385)
78 3dyd_A Tyrosine aminotransfera 99.9 5.5E-24 1.9E-28 182.2 17.5 221 11-238 180-425 (427)
79 3ele_A Amino transferase; RER0 99.9 3.6E-24 1.2E-28 181.3 16.2 216 11-238 161-397 (398)
80 3euc_A Histidinol-phosphate am 99.9 3.4E-24 1.2E-28 179.6 14.5 211 11-235 145-366 (367)
81 3g7q_A Valine-pyruvate aminotr 99.9 1.3E-23 4.3E-28 178.9 18.3 223 11-239 171-415 (417)
82 2dr1_A PH1308 protein, 386AA l 99.9 8.9E-23 3E-27 171.7 22.9 219 10-240 132-382 (386)
83 1fg7_A Histidinol phosphate am 99.9 1.5E-23 5.3E-28 175.3 18.1 207 11-232 136-353 (356)
84 3a2b_A Serine palmitoyltransfe 99.9 1.1E-23 3.9E-28 178.3 17.6 222 4-238 151-393 (398)
85 3ppl_A Aspartate aminotransfer 99.9 3.4E-24 1.2E-28 183.4 14.4 225 11-240 168-423 (427)
86 3kax_A Aminotransferase, class 99.9 1.6E-24 5.3E-29 182.4 12.1 218 11-234 145-382 (383)
87 1u08_A Hypothetical aminotrans 99.9 2.2E-24 7.5E-29 182.0 12.6 215 11-232 152-385 (386)
88 3ei9_A LL-diaminopimelate amin 99.9 4.5E-24 1.6E-28 182.8 14.7 221 4-233 178-424 (432)
89 2x5f_A Aspartate_tyrosine_phen 99.9 2.8E-24 9.7E-29 183.9 13.2 211 21-237 189-429 (430)
90 3ly1_A Putative histidinol-pho 99.9 1.1E-23 3.8E-28 175.6 16.4 218 4-236 116-351 (354)
91 3if2_A Aminotransferase; YP_26 99.9 9.8E-24 3.3E-28 181.2 15.8 226 11-240 192-443 (444)
92 1xi9_A Putative transaminase; 99.9 3.5E-24 1.2E-28 182.1 12.7 220 11-238 163-404 (406)
93 3d6k_A Putative aminotransfera 99.9 6.1E-24 2.1E-28 181.6 14.2 224 11-239 166-420 (422)
94 2o0r_A RV0858C (N-succinyldiam 99.9 1.8E-24 6.2E-29 184.1 10.9 220 11-237 149-396 (411)
95 2bwn_A 5-aminolevulinate synth 99.9 1E-23 3.5E-28 178.8 15.5 222 3-237 155-400 (401)
96 3asa_A LL-diaminopimelate amin 99.9 5E-24 1.7E-28 180.8 13.3 211 20-238 162-394 (400)
97 1bs0_A Protein (8-amino-7-oxon 99.9 1.5E-23 5.1E-28 176.7 15.6 217 4-233 147-383 (384)
98 3ftb_A Histidinol-phosphate am 99.9 5.6E-23 1.9E-27 171.7 18.7 203 22-236 145-360 (361)
99 3kgw_A Alanine-glyoxylate amin 99.9 3.6E-23 1.2E-27 174.4 16.9 218 11-240 136-391 (393)
100 3ez1_A Aminotransferase MOCR f 99.9 2.1E-23 7.2E-28 178.1 15.6 224 11-239 159-417 (423)
101 1lc5_A COBD, L-threonine-O-3-p 99.9 2E-23 7E-28 174.8 14.6 205 19-237 144-360 (364)
102 3e2y_A Kynurenine-oxoglutarate 99.9 2.5E-23 8.6E-28 176.7 15.4 215 11-232 156-408 (410)
103 1elu_A L-cysteine/L-cystine C- 99.9 2.5E-22 8.4E-27 169.2 21.2 210 11-232 143-387 (390)
104 3hdo_A Histidinol-phosphate am 99.9 5.2E-23 1.8E-27 172.1 16.6 200 22-237 150-355 (360)
105 3cq5_A Histidinol-phosphate am 99.9 1.7E-22 5.7E-27 169.6 18.2 208 11-235 152-366 (369)
106 3zrp_A Serine-pyruvate aminotr 99.9 3.6E-22 1.2E-26 167.8 20.0 215 11-238 115-364 (384)
107 3get_A Histidinol-phosphate am 99.9 3.8E-23 1.3E-27 173.1 13.3 210 11-234 142-364 (365)
108 1m32_A 2-aminoethylphosphonate 99.9 6.1E-22 2.1E-26 165.3 19.9 215 10-236 117-364 (366)
109 3nnk_A Ureidoglycine-glyoxylat 99.9 1.3E-22 4.6E-27 172.1 16.0 216 11-238 126-391 (411)
110 3rq1_A Aminotransferase class 99.9 9.1E-23 3.1E-27 173.9 13.8 208 20-238 178-416 (418)
111 3b1d_A Betac-S lyase; HET: PLP 99.8 5.3E-25 1.8E-29 186.3 0.0 219 11-235 152-391 (392)
112 3f9t_A TDC, L-tyrosine decarbo 99.9 4.9E-22 1.7E-26 167.4 17.9 217 4-235 147-396 (397)
113 1bw0_A TAT, protein (tyrosine 99.9 2.6E-22 8.7E-27 170.9 15.9 222 11-238 166-414 (416)
114 2yrr_A Aminotransferase, class 99.9 6.1E-22 2.1E-26 164.5 17.3 215 10-236 111-352 (353)
115 1kmj_A Selenocysteine lyase; p 99.9 2.8E-21 9.6E-26 163.5 21.6 211 11-237 153-405 (406)
116 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 4.3E-23 1.5E-27 172.9 10.3 202 20-237 146-370 (371)
117 1qz9_A Kynureninase; kynurenin 99.9 2.5E-21 8.4E-26 164.7 20.9 216 5-237 150-402 (416)
118 3ke3_A Putative serine-pyruvat 99.9 2.5E-22 8.6E-27 169.3 13.8 218 10-239 122-378 (379)
119 3isl_A Purine catabolism prote 99.9 7E-22 2.4E-26 167.9 16.5 215 11-237 124-390 (416)
120 3f0h_A Aminotransferase; RER07 99.9 1.7E-21 5.7E-26 163.6 18.6 212 11-236 133-373 (376)
121 1iug_A Putative aspartate amin 99.9 4.8E-21 1.7E-25 159.2 20.9 205 20-237 120-348 (352)
122 1t3i_A Probable cysteine desul 99.9 6.8E-21 2.3E-25 161.9 21.1 214 11-239 158-415 (420)
123 2z9v_A Aspartate aminotransfer 99.9 4.8E-21 1.6E-25 161.6 18.9 216 11-238 121-372 (392)
124 1vjo_A Alanine--glyoxylate ami 99.9 2.9E-21 9.8E-26 163.1 16.7 212 10-234 146-392 (393)
125 1eg5_A Aminotransferase; PLP-d 99.9 2.1E-20 7.1E-25 157.0 21.8 215 11-239 128-378 (384)
126 3cai_A Possible aminotransfera 99.9 1.2E-20 4.1E-25 160.0 19.8 214 4-232 141-404 (406)
127 3f6t_A Aspartate aminotransfer 99.9 3.7E-21 1.2E-25 169.0 16.9 222 11-239 233-527 (533)
128 3lvm_A Cysteine desulfurase; s 99.9 3.6E-20 1.2E-24 157.8 22.6 213 11-239 152-401 (423)
129 3t18_A Aminotransferase class 99.9 9.4E-22 3.2E-26 167.4 12.6 205 21-239 178-412 (413)
130 1ajs_A Aspartate aminotransfer 99.9 3.4E-22 1.2E-26 170.0 9.4 204 20-237 182-411 (412)
131 3fkd_A L-threonine-O-3-phospha 99.9 7.3E-21 2.5E-25 158.4 16.7 201 20-236 128-341 (350)
132 3p1t_A Putative histidinol-pho 99.9 1.3E-20 4.4E-25 155.8 17.9 195 20-234 134-334 (337)
133 1uu1_A Histidinol-phosphate am 99.9 4.6E-21 1.6E-25 158.8 15.1 195 20-233 137-334 (335)
134 4hvk_A Probable cysteine desul 99.9 3.3E-20 1.1E-24 155.4 19.8 212 11-239 127-375 (382)
135 2ch1_A 3-hydroxykynurenine tra 99.9 1.5E-20 5.2E-25 158.7 17.7 216 10-238 130-384 (396)
136 3mad_A Sphingosine-1-phosphate 99.9 1.6E-20 5.6E-25 164.2 17.9 225 4-240 216-472 (514)
137 1jg8_A L-ALLO-threonine aldola 99.9 6E-21 2.1E-25 158.6 14.3 218 11-237 115-346 (347)
138 3tcm_A Alanine aminotransferas 99.9 3.7E-21 1.2E-25 167.8 13.2 213 21-240 237-497 (500)
139 2huf_A Alanine glyoxylate amin 99.9 1.3E-20 4.6E-25 158.9 16.3 218 10-239 131-385 (393)
140 2q7w_A Aspartate aminotransfer 99.9 3.3E-22 1.1E-26 169.0 6.2 210 11-233 158-395 (396)
141 3e9k_A Kynureninase; kynurenin 99.9 1.3E-20 4.4E-25 162.9 15.7 215 11-239 200-463 (465)
142 3pj0_A LMO0305 protein; struct 99.8 2E-20 6.7E-25 156.2 14.8 214 11-233 127-358 (359)
143 2ay1_A Aroat, aromatic amino a 99.8 1.3E-21 4.6E-26 165.3 7.4 210 11-233 155-392 (394)
144 2rfv_A Methionine gamma-lyase; 99.8 2.4E-20 8.2E-25 158.1 14.8 216 4-233 131-396 (398)
145 3ffr_A Phosphoserine aminotran 99.8 4.6E-20 1.6E-24 153.7 16.3 206 11-234 121-361 (362)
146 2zy4_A L-aspartate beta-decarb 99.8 8E-20 2.7E-24 160.8 18.4 224 11-238 234-523 (546)
147 3ihj_A Alanine aminotransferas 99.8 1.9E-20 6.6E-25 163.2 14.4 213 21-240 235-496 (498)
148 1pff_A Methionine gamma-lyase; 99.8 2.3E-19 7.8E-24 148.2 18.3 212 4-233 65-330 (331)
149 4f4e_A Aromatic-amino-acid ami 99.8 1.4E-20 4.7E-25 160.7 10.1 211 11-234 181-419 (420)
150 3fsl_A Aromatic-amino-acid ami 99.8 1.8E-20 6.2E-25 158.4 10.6 210 11-233 159-396 (397)
151 2vi8_A Serine hydroxymethyltra 99.8 3.7E-20 1.3E-24 156.8 12.5 215 11-238 151-388 (405)
152 2dkj_A Serine hydroxymethyltra 99.8 6E-20 2.1E-24 155.6 13.8 214 10-236 150-387 (407)
153 1cs1_A CGS, protein (cystathio 99.8 4.6E-20 1.6E-24 155.7 12.9 214 4-233 119-383 (386)
154 3vax_A Putative uncharacterize 99.8 2.3E-19 7.9E-24 151.7 17.1 209 11-236 148-399 (400)
155 1yaa_A Aspartate aminotransfer 99.8 5.9E-21 2E-25 162.4 7.2 203 21-236 176-410 (412)
156 4eu1_A Mitochondrial aspartate 99.8 9.9E-21 3.4E-25 160.9 8.3 210 11-234 169-408 (409)
157 2bkw_A Alanine-glyoxylate amin 99.8 2.3E-19 7.7E-24 150.8 16.3 211 11-236 125-383 (385)
158 1e5e_A MGL, methionine gamma-l 99.8 4.4E-19 1.5E-23 150.7 17.9 216 4-240 129-398 (404)
159 1v72_A Aldolase; PLP-dependent 99.8 1.2E-19 4.2E-24 150.9 13.8 199 21-237 141-353 (356)
160 3lws_A Aromatic amino acid bet 99.8 8.5E-20 2.9E-24 152.2 12.6 215 11-234 126-356 (357)
161 4eb5_A Probable cysteine desul 99.8 9E-19 3.1E-23 147.0 18.4 212 11-239 127-375 (382)
162 3mc6_A Sphingosine-1-phosphate 99.8 4.5E-19 1.5E-23 154.4 15.9 217 12-240 196-440 (497)
163 3meb_A Aspartate aminotransfer 99.8 3.2E-20 1.1E-24 159.8 8.4 205 20-237 201-444 (448)
164 3k7y_A Aspartate aminotransfer 99.8 5.6E-20 1.9E-24 156.1 8.9 203 20-236 172-404 (405)
165 1svv_A Threonine aldolase; str 99.8 9.9E-20 3.4E-24 151.5 10.0 202 21-237 145-358 (359)
166 1gc0_A Methionine gamma-lyase; 99.8 8.2E-19 2.8E-23 148.7 15.5 213 4-233 132-397 (398)
167 1wyu_B Glycine dehydrogenase s 99.8 2.3E-18 7.9E-23 149.2 18.6 221 4-236 180-440 (474)
168 1ibj_A CBL, cystathionine beta 99.8 9.8E-20 3.3E-24 157.2 9.9 214 4-236 199-461 (464)
169 1ax4_A Tryptophanase; tryptoph 99.8 8.3E-19 2.8E-23 151.4 15.6 220 11-238 168-442 (467)
170 3qhx_A Cystathionine gamma-syn 99.8 3.7E-19 1.3E-23 150.7 12.9 214 4-230 133-391 (392)
171 3a9z_A Selenocysteine lyase; P 99.8 3.2E-18 1.1E-22 146.3 18.8 216 11-239 164-430 (432)
172 2oga_A Transaminase; PLP-depen 99.8 1.8E-18 6.1E-23 146.6 16.0 209 11-238 140-397 (399)
173 1w23_A Phosphoserine aminotran 99.8 6.2E-18 2.1E-22 141.0 18.1 206 10-236 128-359 (360)
174 7aat_A Aspartate aminotransfer 99.8 4.2E-19 1.4E-23 150.3 11.1 203 19-234 173-400 (401)
175 3uwc_A Nucleotide-sugar aminot 99.8 4.2E-18 1.4E-22 142.8 16.6 215 4-236 102-370 (374)
176 3ecd_A Serine hydroxymethyltra 99.8 1.7E-18 5.8E-23 147.4 13.7 214 11-237 160-397 (425)
177 2fnu_A Aminotransferase; prote 99.8 1.6E-17 5.6E-22 139.1 19.3 210 11-237 110-372 (375)
178 3ndn_A O-succinylhomoserine su 99.8 4.2E-19 1.4E-23 151.2 9.6 215 3-234 147-413 (414)
179 2ez2_A Beta-tyrosinase, tyrosi 99.8 8.8E-19 3E-23 150.9 10.5 222 11-238 159-432 (456)
180 2oqx_A Tryptophanase; lyase, p 99.8 2.9E-18 9.9E-23 148.0 13.5 221 11-238 168-443 (467)
181 1qgn_A Protein (cystathionine 99.8 1.2E-18 4.2E-23 149.5 10.3 216 4-236 181-444 (445)
182 3gbx_A Serine hydroxymethyltra 99.8 1.5E-18 5E-23 147.6 10.7 215 10-237 156-396 (420)
183 4h51_A Aspartate aminotransfer 99.8 3E-18 1E-22 145.9 12.1 208 19-240 188-420 (420)
184 3dr4_A Putative perosamine syn 99.8 3.6E-17 1.2E-21 138.0 18.7 207 11-234 133-390 (391)
185 2aeu_A Hypothetical protein MJ 99.8 8.6E-19 2.9E-23 147.5 8.7 219 10-239 129-373 (374)
186 3frk_A QDTB; aminotransferase, 99.8 2E-17 7E-22 138.7 16.8 208 11-236 113-367 (373)
187 1mdo_A ARNB aminotransferase; 99.8 1.5E-17 5E-22 140.3 15.9 208 11-237 116-386 (393)
188 2cb1_A O-acetyl homoserine sul 99.8 1.9E-17 6.4E-22 141.0 16.4 210 4-232 123-411 (412)
189 3cog_A Cystathionine gamma-lya 99.8 3.2E-18 1.1E-22 145.4 11.6 214 4-233 133-398 (403)
190 1n8p_A Cystathionine gamma-lya 99.8 4.2E-18 1.4E-22 144.2 12.1 215 4-233 121-391 (393)
191 2c0r_A PSAT, phosphoserine ami 99.8 4.5E-17 1.5E-21 136.0 18.2 200 18-237 139-361 (362)
192 2qma_A Diaminobutyrate-pyruvat 99.8 3.4E-17 1.2E-21 142.6 17.6 227 3-237 228-496 (497)
193 3h7f_A Serine hydroxymethyltra 99.8 5.1E-18 1.8E-22 145.9 11.8 215 10-237 172-414 (447)
194 3n0l_A Serine hydroxymethyltra 99.8 1.9E-17 6.4E-22 140.7 15.1 215 10-237 151-389 (417)
195 1b9h_A AHBA synthase, protein 99.8 2.8E-17 9.5E-22 138.5 15.9 211 11-236 115-387 (388)
196 3acz_A Methionine gamma-lyase; 99.7 1.8E-17 6.1E-22 140.1 14.5 211 4-235 126-387 (389)
197 2fyf_A PSAT, phosphoserine ami 99.7 9.8E-18 3.3E-22 141.9 12.5 201 19-236 163-397 (398)
198 2z67_A O-phosphoseryl-tRNA(SEC 99.7 2.2E-17 7.5E-22 142.4 14.6 210 11-234 215-455 (456)
199 2po3_A 4-dehydrase; external a 99.7 1.2E-16 4E-21 136.4 18.3 210 11-237 127-386 (424)
200 3nmy_A Xometc, cystathionine g 99.7 9.9E-18 3.4E-22 142.2 11.5 216 3-235 133-397 (400)
201 3bwn_A AT1G70560, L-tryptophan 99.7 6.9E-18 2.3E-22 142.8 8.6 199 19-236 155-386 (391)
202 3hbx_A GAD 1, glutamate decarb 99.7 3.1E-16 1.1E-20 136.7 19.2 223 11-240 191-447 (502)
203 2dgk_A GAD-beta, GADB, glutama 99.7 4.7E-16 1.6E-20 133.8 20.0 223 11-240 176-437 (452)
204 3nyt_A Aminotransferase WBPE; 99.7 8.6E-17 2.9E-21 134.7 14.9 202 11-233 112-360 (367)
205 2x3l_A ORN/Lys/Arg decarboxyla 99.7 2.4E-17 8.2E-22 141.7 11.7 202 18-237 143-353 (446)
206 2okj_A Glutamate decarboxylase 99.7 2.4E-16 8.3E-21 137.5 17.3 229 3-237 215-502 (504)
207 2fq6_A Cystathionine beta-lyas 99.7 6.6E-17 2.3E-21 137.7 13.1 216 4-232 149-413 (415)
208 2jis_A Cysteine sulfinic acid 99.7 3E-16 1E-20 137.3 15.8 208 21-236 259-514 (515)
209 2ctz_A O-acetyl-L-homoserine s 99.7 3.3E-16 1.1E-20 133.7 14.4 214 4-234 125-420 (421)
210 1rv3_A Serine hydroxymethyltra 99.7 1.6E-16 5.3E-21 138.0 11.9 211 11-236 181-430 (483)
211 4e1o_A HDC, histidine decarbox 99.7 5E-15 1.7E-19 128.4 19.9 211 22-239 242-480 (481)
212 2c81_A Glutamine-2-deoxy-scyll 99.7 3.8E-15 1.3E-19 126.8 17.7 211 11-238 119-415 (418)
213 1o69_A Aminotransferase; struc 99.7 3.4E-15 1.2E-19 126.2 16.1 200 21-236 122-386 (394)
214 3ri6_A O-acetylhomoserine sulf 99.6 1.2E-15 3.9E-20 130.5 11.9 213 3-234 148-429 (430)
215 3vp6_A Glutamate decarboxylase 99.6 7.3E-15 2.5E-19 128.3 17.1 210 22-237 249-505 (511)
216 1js3_A DDC;, DOPA decarboxylas 99.6 9.7E-15 3.3E-19 126.7 17.6 209 23-239 237-476 (486)
217 3k40_A Aromatic-L-amino-acid d 99.6 1.2E-14 4.1E-19 125.8 18.1 211 22-239 235-473 (475)
218 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 2.2E-14 7.4E-19 122.9 19.2 207 11-235 147-434 (437)
219 2a7v_A Serine hydroxymethyltra 99.6 2E-15 6.9E-20 130.7 12.6 213 10-236 190-440 (490)
220 1wyu_A Glycine dehydrogenase ( 99.6 6.1E-14 2.1E-18 120.2 20.7 201 18-234 193-437 (438)
221 3b8x_A WBDK, pyridoxamine 5-ph 99.6 4E-14 1.4E-18 119.3 18.5 203 11-230 117-389 (390)
222 2hox_A ALLIIN lyase 1; cystein 99.6 3.4E-15 1.2E-19 127.6 10.7 201 12-235 186-423 (427)
223 3e77_A Phosphoserine aminotran 99.6 1.8E-13 6.3E-18 114.7 17.9 203 15-236 146-374 (377)
224 1c4k_A Protein (ornithine deca 99.5 2.4E-13 8.2E-18 122.8 17.0 209 23-238 283-567 (730)
225 3qm2_A Phosphoserine aminotran 99.5 2.9E-13 1E-17 113.9 15.8 203 15-236 160-384 (386)
226 3ju7_A Putative PLP-dependent 99.5 1.1E-13 3.8E-18 116.4 12.8 208 11-236 115-374 (377)
227 3ht4_A Aluminum resistance pro 99.5 3.3E-13 1.1E-17 115.3 15.1 186 4-199 142-345 (431)
228 3m5u_A Phosphoserine aminotran 99.5 1.9E-12 6.6E-17 108.0 16.8 198 18-236 137-359 (361)
229 2vyc_A Biodegradative arginine 99.4 8.5E-13 2.9E-17 120.0 12.8 207 24-237 315-605 (755)
230 3jzl_A Putative cystathionine 99.4 1.8E-12 6.1E-17 110.0 13.7 178 10-200 147-340 (409)
231 3i16_A Aluminum resistance pro 99.4 8.3E-13 2.8E-17 112.5 8.7 174 10-199 162-356 (427)
232 3hvy_A Cystathionine beta-lyas 99.3 1.8E-11 6E-16 104.4 12.9 176 10-198 162-355 (427)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.2 2.8E-10 9.6E-15 96.3 14.7 213 20-241 215-465 (501)
234 3bc8_A O-phosphoseryl-tRNA(SEC 99.2 2.1E-10 7.2E-15 97.6 13.4 212 20-240 197-446 (450)
235 3n75_A LDC, lysine decarboxyla 99.1 2E-09 6.7E-14 96.8 14.2 204 24-236 300-559 (715)
236 3ou5_A Serine hydroxymethyltra 99.0 1.1E-08 3.8E-13 86.3 14.3 207 15-235 197-439 (490)
237 1tks_A 3,4-dihydroxy-2-butanon 71.2 4.5 0.00016 30.2 4.0 38 19-60 157-194 (204)
238 1vhx_A Putative holliday junct 67.6 6.3 0.00021 27.9 4.0 51 15-65 49-101 (150)
239 3mio_A DHBP synthase, 3,4-dihy 61.3 13 0.00043 27.9 4.7 38 19-60 156-194 (206)
240 1g57_A DHBP synthase, 3,4-dihy 53.9 19 0.00064 27.2 4.6 37 19-60 165-201 (217)
241 1snn_A DHBP synthase, 3,4-dihy 53.8 18 0.0006 27.5 4.4 37 19-60 176-212 (227)
242 1qys_A TOP7; alpha-beta, novel 51.4 39 0.0013 20.6 6.0 42 188-237 33-74 (106)
243 3bzy_B ESCU; auto cleavage pro 49.7 11 0.00036 23.8 2.3 23 42-64 27-49 (83)
244 4gqr_A Pancreatic alpha-amylas 46.9 16 0.00054 30.7 3.7 58 8-65 20-100 (496)
245 3o63_A Probable thiamine-phosp 45.3 18 0.0006 27.8 3.4 20 43-62 84-103 (243)
246 3v7e_A Ribosome-associated pro 45.2 29 0.00098 21.5 3.8 43 15-65 21-63 (82)
247 3pzt_A Endoglucanase; alpha/be 43.8 17 0.0006 29.1 3.3 22 41-62 104-125 (327)
248 3t7y_A YOP proteins translocat 43.5 15 0.0005 23.9 2.2 23 42-64 42-64 (97)
249 2vt1_B Surface presentation of 42.5 16 0.00054 23.5 2.3 23 42-64 27-49 (93)
250 7a3h_A Endoglucanase; hydrolas 41.9 20 0.00067 28.3 3.3 23 41-63 79-101 (303)
251 3c01_E Surface presentation of 41.3 16 0.00056 23.7 2.2 23 42-64 27-49 (98)
252 1k4i_A 3,4-dihydroxy-2-butanon 39.3 37 0.0012 25.9 4.2 38 19-60 165-212 (233)
253 1tvn_A Cellulase, endoglucanas 39.0 24 0.00081 27.5 3.4 22 42-63 79-100 (293)
254 1g94_A Alpha-amylase; beta-alp 38.9 25 0.00086 29.5 3.7 27 39-65 62-88 (448)
255 1uta_A FTSN, MSGA, cell divisi 38.2 44 0.0015 20.3 3.9 47 186-232 21-68 (81)
256 3vup_A Beta-1,4-mannanase; TIM 37.7 25 0.00085 27.4 3.4 22 42-63 90-111 (351)
257 3bh4_A Alpha-amylase; calcium, 37.7 26 0.0009 29.6 3.7 28 38-65 75-102 (483)
258 2whl_A Beta-mannanase, baman5; 37.3 25 0.00084 27.5 3.2 23 40-62 62-84 (294)
259 1bqc_A Protein (beta-mannanase 37.3 26 0.00089 27.4 3.4 23 40-62 63-85 (302)
260 3d0j_A Uncharacterized protein 37.0 39 0.0014 23.5 3.7 33 19-53 99-136 (140)
261 3jug_A Beta-mannanase; TIM-bar 36.8 25 0.00085 28.5 3.2 24 40-63 85-108 (345)
262 4hty_A Cellulase; (alpha/beta) 36.7 26 0.0009 28.4 3.4 21 42-62 121-141 (359)
263 1wpc_A Glucan 1,4-alpha-maltoh 36.5 28 0.00096 29.5 3.7 28 38-65 79-106 (485)
264 1g01_A Endoglucanase; alpha/be 36.2 27 0.00092 28.3 3.4 23 42-64 90-112 (364)
265 1egz_A Endoglucanase Z, EGZ, C 36.2 28 0.00096 27.1 3.4 21 42-62 77-97 (291)
266 3n9k_A Glucan 1,3-beta-glucosi 35.1 29 0.00098 28.8 3.4 23 40-62 111-133 (399)
267 2cks_A Endoglucanase E-5; carb 34.3 29 0.00099 27.3 3.2 21 42-62 80-100 (306)
268 1ud2_A Amylase, alpha-amylase; 34.3 33 0.0011 29.0 3.7 28 38-65 77-104 (480)
269 1ht6_A AMY1, alpha-amylase iso 34.3 34 0.0012 28.2 3.7 47 19-65 32-92 (405)
270 1lwj_A 4-alpha-glucanotransfer 33.9 35 0.0012 28.5 3.7 26 40-65 68-93 (441)
271 1hvx_A Alpha-amylase; hydrolas 33.4 35 0.0012 29.3 3.7 28 38-65 78-105 (515)
272 3twe_A Alpha4H; unknown functi 33.3 39 0.0013 15.4 2.5 14 142-155 12-25 (27)
273 3dhu_A Alpha-amylase; structur 33.3 35 0.0012 28.5 3.7 26 40-65 82-107 (449)
274 1mxg_A Alpha amylase; hyperthe 33.3 36 0.0012 28.4 3.7 26 40-65 85-110 (435)
275 1qnr_A Endo-1,4-B-D-mannanase; 32.8 33 0.0011 27.3 3.3 22 41-62 89-110 (344)
276 1h4p_A Glucan 1,3-beta-glucosi 32.7 33 0.0011 28.5 3.4 25 40-64 112-136 (408)
277 1x7f_A Outer surface protein; 32.4 46 0.0016 27.5 4.1 29 35-63 67-95 (385)
278 1h1n_A Endo type cellulase ENG 32.3 35 0.0012 26.8 3.4 23 42-64 72-94 (305)
279 2keb_A DNA polymerase subunit 31.9 41 0.0014 21.8 2.9 20 37-56 40-59 (101)
280 3qr3_A Endoglucanase EG-II; TI 31.9 36 0.0012 27.5 3.4 24 41-64 83-106 (340)
281 2p0o_A Hypothetical protein DU 31.6 43 0.0015 27.5 3.8 61 32-102 40-101 (372)
282 1jae_A Alpha-amylase; glycosid 31.4 33 0.0011 29.0 3.2 49 17-65 32-98 (471)
283 3bww_A Protein of unknown func 31.2 33 0.0011 27.3 3.0 38 25-62 57-95 (307)
284 2guy_A Alpha-amylase A; (beta- 31.0 40 0.0014 28.4 3.7 27 39-65 95-121 (478)
285 2z1k_A (NEO)pullulanase; hydro 30.4 42 0.0014 28.2 3.7 45 21-65 63-120 (475)
286 1h1y_A D-ribulose-5-phosphate 30.1 64 0.0022 24.1 4.4 38 24-61 141-179 (228)
287 2aaa_A Alpha-amylase; glycosid 30.1 40 0.0014 28.5 3.6 27 39-65 95-121 (484)
288 3l55_A B-1,4-endoglucanase/cel 30.0 39 0.0013 27.4 3.3 23 42-64 91-113 (353)
289 1gcy_A Glucan 1,4-alpha-maltot 29.8 43 0.0015 28.8 3.7 27 39-65 90-116 (527)
290 1ceo_A Cellulase CELC; glycosy 29.8 40 0.0014 26.8 3.4 23 42-64 69-91 (343)
291 2lbw_A H/ACA ribonucleoprotein 29.7 33 0.0011 23.1 2.4 40 15-61 30-69 (121)
292 1wza_A Alpha-amylase A; hydrol 29.7 44 0.0015 28.3 3.8 48 18-65 45-105 (488)
293 3t5s_A Gilaa.00834.A, macropha 29.0 1.1E+02 0.0037 20.9 5.0 36 206-241 21-56 (135)
294 3b1s_B Flagellar biosynthetic 35.2 12 0.0004 23.8 0.0 22 44-65 29-50 (87)
295 3nco_A Endoglucanase fncel5A; 29.0 43 0.0015 26.4 3.4 24 41-64 81-104 (320)
296 2c0h_A Mannan endo-1,4-beta-ma 28.9 42 0.0014 26.7 3.4 21 42-62 91-111 (353)
297 1ece_A Endocellulase E1; glyco 28.9 42 0.0014 26.9 3.4 24 41-64 94-117 (358)
298 4aie_A Glucan 1,6-alpha-glucos 28.9 45 0.0015 28.5 3.7 26 40-65 78-103 (549)
299 1k7c_A Rhamnogalacturonan acet 28.6 57 0.0019 24.3 3.9 40 20-59 124-167 (233)
300 1ua7_A Alpha-amylase; beta-alp 28.5 38 0.0013 28.1 3.1 26 40-65 73-98 (422)
301 2jli_A YSCU, YOP proteins tran 28.5 34 0.0012 23.2 2.2 24 42-65 71-94 (123)
302 2r2a_A Uncharacterized protein 28.4 17 0.00057 26.9 0.8 15 51-65 84-98 (199)
303 2aif_A Ribosomal protein L7A; 28.3 76 0.0026 21.7 4.1 38 16-60 52-89 (135)
304 3ndz_A Endoglucanase D; cellot 28.0 39 0.0014 27.2 3.0 24 41-64 82-105 (345)
305 2llz_A Uncharacterized protein 28.0 1.2E+02 0.0042 19.5 5.9 58 173-232 10-77 (100)
306 3fwt_A Macrophage migration in 27.7 1.1E+02 0.0038 20.7 4.9 35 207-241 21-55 (133)
307 1wky_A Endo-beta-1,4-mannanase 27.6 44 0.0015 28.2 3.4 23 40-62 70-92 (464)
308 2ze0_A Alpha-glucosidase; TIM 27.6 48 0.0016 28.7 3.7 26 40-65 77-102 (555)
309 1m53_A Isomaltulose synthase; 27.3 49 0.0017 28.7 3.7 26 40-65 91-116 (570)
310 1b93_A Protein (methylglyoxal 27.2 41 0.0014 23.8 2.6 44 15-61 76-119 (152)
311 1zja_A Trehalulose synthase; s 27.1 49 0.0017 28.6 3.7 26 40-65 78-103 (557)
312 1x60_A Sporulation-specific N- 27.1 1E+02 0.0036 18.3 6.0 47 186-232 21-68 (79)
313 3bzs_A ESCU; auto cleavage pro 27.1 37 0.0013 23.6 2.2 24 42-65 81-104 (137)
314 3vej_A Ubiquitin-like protein 27.0 3.7 0.00012 22.0 -2.2 11 4-14 3-13 (41)
315 3edf_A FSPCMD, cyclomaltodextr 26.8 68 0.0023 28.0 4.5 45 21-65 161-222 (601)
316 2kxe_A DNA polymerase II small 26.8 19 0.00065 21.3 0.6 24 44-67 37-60 (75)
317 1cyg_A Cyclodextrin glucanotra 26.7 50 0.0017 29.4 3.7 27 39-65 109-135 (680)
318 1vjz_A Endoglucanase; TM1752, 26.6 48 0.0017 26.3 3.3 24 41-64 76-99 (341)
319 1edg_A Endoglucanase A; family 26.6 46 0.0016 27.1 3.2 23 42-64 101-123 (380)
320 1d3c_A Cyclodextrin glycosyltr 26.6 50 0.0017 29.5 3.7 27 39-65 113-139 (686)
321 2x4k_A 4-oxalocrotonate tautom 26.6 88 0.003 17.3 4.8 32 208-239 4-35 (63)
322 3ivz_A Nitrilase; alpha-beta s 26.5 1.1E+02 0.0037 23.2 5.2 37 24-60 36-85 (262)
323 3ayr_A Endoglucanase; TIM barr 26.5 46 0.0016 27.0 3.2 24 41-64 102-125 (376)
324 2dh2_A 4F2 cell-surface antige 26.1 58 0.002 27.1 3.8 26 40-65 80-105 (424)
325 3icg_A Endoglucanase D; cellul 26.1 46 0.0016 28.5 3.2 24 42-65 86-109 (515)
326 3aof_A Endoglucanase; glycosyl 26.0 52 0.0018 25.8 3.4 24 41-64 73-96 (317)
327 2zic_A Dextran glucosidase; TI 25.8 51 0.0018 28.4 3.5 26 40-65 77-102 (543)
328 1wzl_A Alpha-amylase II; pullu 25.8 65 0.0022 28.1 4.2 27 39-65 217-243 (585)
329 2y8k_A Arabinoxylanase, carboh 25.6 50 0.0017 28.1 3.3 21 41-61 79-99 (491)
330 2wsk_A Glycogen debranching en 25.6 54 0.0019 29.1 3.7 26 40-65 240-265 (657)
331 3cpq_A 50S ribosomal protein L 25.5 58 0.002 21.3 3.0 37 15-59 31-67 (110)
332 2jlj_A YSCU, YOP proteins tran 25.3 41 0.0014 23.5 2.2 24 42-65 80-103 (144)
333 2wc7_A Alpha amylase, catalyti 25.3 45 0.0015 28.2 3.0 45 21-65 69-126 (488)
334 2gjh_A Designed protein; oblig 25.2 93 0.0032 17.1 4.3 28 209-237 3-30 (62)
335 1rh9_A Endo-beta-mannanase; en 25.1 54 0.0018 26.4 3.4 20 42-61 85-104 (373)
336 3jyw_G 60S ribosomal protein L 24.8 52 0.0018 21.9 2.6 40 15-61 35-74 (113)
337 3bc9_A AMYB, alpha amylase, ca 24.7 60 0.002 28.5 3.7 27 39-65 206-232 (599)
338 2osx_A Endoglycoceramidase II; 24.4 55 0.0019 27.7 3.4 20 43-62 106-125 (481)
339 3fxd_A Protein ICMQ; helix bun 24.4 88 0.003 17.8 3.1 19 218-236 5-23 (57)
340 1j0h_A Neopullulanase; beta-al 24.3 61 0.0021 28.2 3.7 44 22-65 190-246 (588)
341 3ry0_A Putative tautomerase; o 24.2 1.1E+02 0.0036 17.4 4.8 30 209-238 2-31 (65)
342 1uok_A Oligo-1,6-glucosidase; 24.1 62 0.0021 28.0 3.7 26 40-65 77-102 (558)
343 1sn9_A BBAT, tetrameric beta-B 24.1 56 0.0019 14.8 1.8 18 37-54 3-20 (26)
344 1g60_A Adenine-specific methyl 24.0 41 0.0014 25.7 2.3 48 15-62 17-76 (260)
345 3p8k_A Hydrolase, carbon-nitro 23.9 1.1E+02 0.0038 23.5 4.9 37 24-60 55-100 (281)
346 4aef_A Neopullulanase (alpha-a 23.8 62 0.0021 28.5 3.7 28 38-65 282-309 (645)
347 4a1f_A DNAB helicase, replicat 23.7 83 0.0028 25.4 4.1 41 21-61 156-202 (338)
348 3m07_A Putative alpha amylase; 23.5 82 0.0028 27.8 4.4 29 40-68 201-229 (618)
349 2ale_A SNU13, NHP2/L7AE family 23.4 44 0.0015 23.0 2.1 36 18-60 45-80 (134)
350 1qho_A Alpha-amylase; glycosid 23.4 64 0.0022 28.7 3.7 27 39-65 105-131 (686)
351 1tqj_A Ribulose-phosphate 3-ep 23.3 1.5E+02 0.005 22.2 5.3 39 23-61 136-179 (230)
352 2vr5_A Glycogen operon protein 23.1 53 0.0018 29.5 3.2 25 41-65 266-290 (718)
353 3bmv_A Cyclomaltodextrin gluca 23.1 66 0.0022 28.7 3.7 27 39-65 114-140 (683)
354 2jep_A Xyloglucanase; family 5 23.0 54 0.0019 26.7 3.0 24 42-65 110-133 (395)
355 1bf2_A Isoamylase; hydrolase, 22.8 59 0.002 29.4 3.4 25 41-65 272-296 (750)
356 3m21_A Probable tautomerase HP 22.7 1.2E+02 0.004 17.4 5.0 30 209-238 2-34 (67)
357 3pzg_A Mannan endo-1,4-beta-ma 22.5 64 0.0022 26.5 3.3 22 41-62 99-120 (383)
358 3qho_A Endoglucanase, 458AA lo 22.5 64 0.0022 27.3 3.4 25 41-65 133-157 (458)
359 3aj7_A Oligo-1,6-glucosidase; 22.5 70 0.0024 27.9 3.7 26 40-65 86-111 (589)
360 3nl6_A Thiamine biosynthetic b 22.4 51 0.0018 28.6 2.8 39 21-62 38-76 (540)
361 4aee_A Alpha amylase, catalyti 22.3 69 0.0024 28.6 3.7 45 21-65 278-335 (696)
362 3cg6_A Growth arrest and DNA-d 22.1 77 0.0026 22.2 3.1 23 42-64 63-86 (146)
363 1uuq_A Mannosyl-oligosaccharid 22.0 66 0.0022 26.8 3.4 20 42-61 111-130 (440)
364 4aio_A Limit dextrinase; hydro 21.8 1.4E+02 0.0048 27.2 5.8 45 22-66 359-403 (884)
365 2bhu_A Maltooligosyltrehalose 21.2 97 0.0033 27.2 4.4 28 40-67 191-218 (602)
366 1ea9_C Cyclomaltodextrinase; h 21.1 81 0.0028 27.5 3.8 44 22-65 186-242 (583)
367 2wan_A Pullulanase; hydrolase, 21.1 1.4E+02 0.0049 27.7 5.7 27 41-67 531-557 (921)
368 3vgf_A Malto-oligosyltrehalose 21.0 1E+02 0.0035 26.6 4.5 27 41-67 167-193 (558)
369 2qen_A Walker-type ATPase; unk 20.8 77 0.0026 24.8 3.4 24 42-65 115-139 (350)
370 1to3_A Putative aldolase YIHT; 20.7 73 0.0025 25.2 3.2 20 42-61 142-161 (304)
371 3b0z_B Flagellar biosynthetic 26.1 21 0.00072 23.9 0.0 22 44-65 29-50 (114)
372 1m7x_A 1,4-alpha-glucan branch 20.5 1.1E+02 0.0038 26.9 4.6 28 40-67 203-230 (617)
373 1dd5_A Ribosome recycling fact 20.5 2.5E+02 0.0086 20.4 8.1 49 186-235 73-122 (185)
374 3czg_A Sucrose hydrolase; (alp 20.1 83 0.0028 27.8 3.7 26 40-65 154-179 (644)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=3.8e-39 Score=276.94 Aligned_cols=217 Identities=34% Similarity=0.621 Sum_probs=197.4
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYP 98 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~ 98 (242)
.+++++|++||+++.+|.++|+++|+++|+++|++||+++|+||+++|||++|..|+++++|+.||+++++|+++|| +|
T Consensus 224 ~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg-~P 302 (456)
T 4atq_A 224 GDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGG-LP 302 (456)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTT-SS
T ss_pred CCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCc-CC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred hheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-------CCCCeEe
Q psy6548 99 ISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-------DIVPVVR 171 (242)
Q Consensus 99 ~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-------~~~~~~~ 171 (242)
+|.+++++++++.+.+..+++||++||+++++++++++.++++++.++.+++.+++++.| +++.. ..+..+.
T Consensus 303 ~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L-~~l~~~~~~~~~~~v~~VR 381 (456)
T 4atq_A 303 LSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKL-RELAAELSAGGGSVVGDIR 381 (456)
T ss_dssp CEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHHCC-----CEEEEE
T ss_pred ceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHH-HHHHHhcccccCCceEEee
Confidence 999999999999999999999999999999999999999999999999999999999988 55421 3456778
Q ss_pred eeceeEEEEecCCc------hhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 172 GKGLLNAIVLDKSI------LEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 172 ~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
+.|.++.+++..+. .....+.+.|+++|+++.+++ ++.|||.|++..|++++++++++|++++++.
T Consensus 382 G~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 382 GRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp EETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999986542 346779999999999998754 4789999999999999999999999999863
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=7.8e-39 Score=275.97 Aligned_cols=219 Identities=28% Similarity=0.530 Sum_probs=198.3
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYP 98 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~ 98 (242)
.+++++|++||+++.+|.++|+++|+++|+++|++||+++|+||+++|||++|..|+++++++.||+++++|+++|||+|
T Consensus 234 ~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~P 313 (473)
T 4e3q_A 234 ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFP 313 (473)
T ss_dssp GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSC
T ss_pred CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999988799
Q ss_pred hheeEeChhhhhcc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCeE
Q psy6548 99 ISAVLADDEVMGTL-------VPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-DIVPVV 170 (242)
Q Consensus 99 ~g~~~~~~~~~~~l-------~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~ 170 (242)
+|.+++++++++.+ .+..+++||++||+++++++++++.++++++.++++++..+++++| +.+.. ..+..+
T Consensus 314 l~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L-~~l~~~~~v~~v 392 (473)
T 4e3q_A 314 MGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERL-KHIAERPNIGEY 392 (473)
T ss_dssp CEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHH-HHHTTSTTEEEE
T ss_pred cccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHH-HHHhcCCCeeEE
Confidence 99999999988765 3457899999999999999999999999999999999999999999 66653 345678
Q ss_pred eeeceeEEEEecCCc----------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 171 RGKGLLNAIVLDKSI----------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 171 ~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++.|.++.+++..+. .....+.+.++++|+++.+.+ +.+||+|++..|++++++++++|+++++++.+
T Consensus 393 RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 393 RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-QSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999985432 235679999999999999884 78999999999999999999999999988754
No 3
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=1.8e-37 Score=266.40 Aligned_cols=236 Identities=51% Similarity=0.887 Sum_probs=205.0
Q ss_pred cccccCCCChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCC
Q psy6548 3 LQFPVKSKQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYED 80 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 80 (242)
.+..+|++|+++ +.+.++++++|++||+++++|.++++++++++|+++|++||++||+||+|+||+++|..++++.++
T Consensus 192 ~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~ 271 (433)
T 1z7d_A 192 QFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYN 271 (433)
T ss_dssp CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGT
T ss_pred CeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcC
Confidence 456789999999 445467899999999999999888999999999999999999999999999999888777777788
Q ss_pred CCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Q psy6548 81 VRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 81 ~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~ 160 (242)
+.||++++||++++|++|+|++++++++++.+.+..++.++++|+++++++.++++.++++++.++++++++++++.| +
T Consensus 272 ~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L-~ 350 (433)
T 1z7d_A 272 VKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENL-K 350 (433)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-H
T ss_pred CCCCEEEECccccCCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-H
Confidence 899999999999988679999999999999988877888999999999999999998877788999999999999999 6
Q ss_pred hc--CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 161 RL--SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 161 ~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.+ +.......++.|.++++.++....+..++.+.|.++||++.+++.+.+|++|++.+|++++++++++|+++++++.
T Consensus 351 ~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 351 RELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp HHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 65 3223334567889999998753124778999999999999998789999999999999999999999999998764
Q ss_pred h
Q psy6548 239 A 239 (242)
Q Consensus 239 ~ 239 (242)
.
T Consensus 431 ~ 431 (433)
T 1z7d_A 431 E 431 (433)
T ss_dssp -
T ss_pred h
Confidence 3
No 4
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=4.1e-37 Score=264.63 Aligned_cols=233 Identities=58% Similarity=0.981 Sum_probs=203.9
Q ss_pred cccccCCCChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCC
Q psy6548 3 LQFPVKSKQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYED 80 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 80 (242)
.+..+|++|+++ +.+.++++++|++||+++++|.++++++++++|+++|++||+++|+||+|+||+++|..++++.++
T Consensus 203 ~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~ 282 (439)
T 2oat_A 203 GFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYEN 282 (439)
T ss_dssp TEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGT
T ss_pred CeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhC
Confidence 456789999999 445457899999999999999889999999999999999999999999999999888877777888
Q ss_pred CCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Q psy6548 81 VRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 81 ~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~ 160 (242)
+.||++++||++++|++|+|++++++++++.+.+..++.++++|+++++++.++++.++++++.++++++++++++.| +
T Consensus 283 ~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L-~ 361 (439)
T 2oat_A 283 VRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL-M 361 (439)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-T
T ss_pred CCCcEEEecccccCCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH-H
Confidence 899999999999988679999999999999998877888999999999999999998877788999999999999999 7
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.++.......++.|.+++++++... .+..++.+.|.++||.+.+.+++.+|+++++.+|++++++++++|++++++
T Consensus 362 ~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 362 KLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp TSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecCCCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 7642222345678899999987531 246789999999999999988899999999999999999999999998764
No 5
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=1.7e-37 Score=269.51 Aligned_cols=219 Identities=27% Similarity=0.543 Sum_probs=195.6
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccc-cCCCCCCEEEeeccccCCccc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH-YEDVRPDIVILGKALSGGLYP 98 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~~sK~~~~g~~~ 98 (242)
+++++|++||+++++|.+++++++|++|+++|++||++||+||+|+|||++|..++.+ ++++.||++++||++++||+|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~p 299 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVP 299 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSC
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcC
Confidence 6899999999999999999999999999999999999999999999999999877777 889999999999999999789
Q ss_pred hheeEeChhhhhccCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCeE
Q psy6548 99 ISAVLADDEVMGTLVPG-------THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-DIVPVV 170 (242)
Q Consensus 99 ~g~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~ 170 (242)
+|++++++++++.+.+. .+++|+++|++++++++++++.++++++.++++++.+++++.| +.+.. ......
T Consensus 300 lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~v~~v 378 (476)
T 3i5t_A 300 LGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAAL-ASLRDLPGVAET 378 (476)
T ss_dssp CEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HTTTTSTTEEEE
T ss_pred eEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhcCCCeEEE
Confidence 99999999999988763 5778999999999999999999888889999999999999999 66652 344567
Q ss_pred eeeceeEEEEecCCch----------hHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 171 RGKGLLNAIVLDKSIL----------EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 171 ~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
++.|.++++++..+.. ....+.+.|+++||++.+.+ +++|++|++.+|++++++++++|+++++++.++
T Consensus 379 ~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 379 RSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp EEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999998876410 36678999999999999976 999999999999999999999999999887553
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.8e-37 Score=268.98 Aligned_cols=217 Identities=29% Similarity=0.512 Sum_probs=192.8
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|++||+++++|.++|+++++++|+++|++||+++|+||+|+|||++|..++.+++++.||++++||++++|++|+
T Consensus 222 ~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~pl 301 (472)
T 3hmu_A 222 NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPI 301 (472)
T ss_dssp GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCC
T ss_pred CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcce
Confidence 68999999999999999999999999999999999999999999999999998777788899999999999999765899
Q ss_pred heeEeChhhhhccCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHHHHhhcCC-CCCCeEeeece
Q psy6548 100 SAVLADDEVMGTLVP--GTHGSTYGGNPLACKLAMTALDVILEENMIENAY-KMGEIFRSELRSRLSP-DIVPVVRGKGL 175 (242)
Q Consensus 100 g~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~-~~~~~~~~~~~ 175 (242)
|++++++++++.+.+ ..+++||++|+++++++.++++.++++++.++++ ++.+++++.| +.+.. .....+++.|.
T Consensus 302 G~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~v~~vr~~G~ 380 (472)
T 3hmu_A 302 GGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKW-EALTDHPLVGEAKIVGM 380 (472)
T ss_dssp EEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHH-HGGGGSTTEEEEEEETT
T ss_pred EEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHhcCCCeEEEEecCc
Confidence 999999999998843 3578899999999999999999888788999999 9999999999 77642 34456778899
Q ss_pred eEEEEecCCc-----------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 176 LNAIVLDKSI-----------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 176 ~~~~~~~~~~-----------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
++++++..+. .....+.+.|+++||++.+++ +++|++|++.+|++++++++++|+++++++.
T Consensus 381 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 381 MASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999987531 226789999999999999986 9999999999999999999999999988764
No 7
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=4.1e-37 Score=263.41 Aligned_cols=228 Identities=20% Similarity=0.294 Sum_probs=197.6
Q ss_pred ccccCCCChhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
...+||||+++ +.+. .+++++|++||+++++|.++|+++||++|+++|++||++||+||+++ |++|..++.+++
T Consensus 199 ~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~~~a~e~~ 276 (454)
T 4ao9_A 199 FLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAPHGLANKL 276 (454)
T ss_dssp EEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGSTTCHHHHH
T ss_pred cccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCccccchhcc
Confidence 46789999999 4443 46899999999999999999999999999999999999999999998 488988888999
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCCC----CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
|+.||+++++|+++|| +|+|.+.+++++++.+.+. .+++||++||+++++++++|+.++++++.++++++.++++
T Consensus 277 gv~PDi~t~gK~lggG-~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~ 355 (454)
T 4ao9_A 277 GIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALR 355 (454)
T ss_dssp TCCCSEEEEEGGGGTT-SSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEeccccCCC-CcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHH
Confidence 9999999999999999 8999999999999988753 5788999999999999999999988889999999999999
Q ss_pred HHHHhhcC--CCCCCeEeeeceeEEEEecCCc------------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHH
Q psy6548 156 SELRSRLS--PDIVPVVRGKGLLNAIVLDKSI------------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQ 221 (242)
Q Consensus 156 ~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e 221 (242)
++| +++. ......+.+.|.++.+.+.... .....+...|+++||++.|.+ ++.++..+|++
T Consensus 356 ~~L-~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~----~~~~s~~~T~~ 430 (454)
T 4ao9_A 356 ARL-NALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG----FVVLSLPLTDA 430 (454)
T ss_dssp HHH-HHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC----EEECCTTCCHH
T ss_pred HHH-HHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC----CEEEeCCCCHH
Confidence 999 5552 2467788999999999875431 223567888999999998753 34455779999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy6548 222 ELREGLDIIINTINTMAA 239 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~~~ 239 (242)
|||+++++|++++.++.+
T Consensus 431 dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 431 DIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp HHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999999988643
No 8
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.5e-36 Score=257.53 Aligned_cols=231 Identities=30% Similarity=0.534 Sum_probs=204.4
Q ss_pred cccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 3 LQFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 3 ~~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
.+..+|++|+++ +...++++++|+++|+++++|.++|+++++++|+++|++||+++|+||+|+||++.|..+..+.+++
T Consensus 160 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~ 239 (395)
T 3nx3_A 160 GVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI 239 (395)
T ss_dssp CEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC
T ss_pred CcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC
Confidence 456788999999 6555678999999999999999999999999999999999999999999999998887777778888
Q ss_pred CCCEEEeeccccCCccchheeEeChhh-hhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Q psy6548 82 RPDIVILGKALSGGLYPISAVLADDEV-MGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 82 ~~~~~~~sK~~~~g~~~~g~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~ 160 (242)
.+|++++||++++| +|+|++++++++ ++.+.+..++.+++.++++++++.++++.++.+++.++++++.+++++.| +
T Consensus 240 ~~d~~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l-~ 317 (395)
T 3nx3_A 240 LPDIMTSAKALGCG-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSL-D 317 (395)
T ss_dssp CCSEEEECGGGTTT-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-H
T ss_pred CCCEEEecccccCC-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-H
Confidence 99999999999999 899999999998 88898877888999999999999999998877788899999999999999 5
Q ss_pred hcC--CCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 161 RLS--PDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 161 ~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.+. .......++.|.++++.++.. .+..++.+.|.++||.+++++++++|++|++.+|++++++++++|++++++
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 318 ELINEFDFCKKRKGLGFMQGLSLDKS-VKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp HHHHHCTTEEEEEEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCeEEEEeEEEEEEEEeCCc-chHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 432 123345567889999999875 468889999999999999998999999999999999999999999998864
No 9
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.3e-37 Score=265.64 Aligned_cols=227 Identities=29% Similarity=0.500 Sum_probs=198.4
Q ss_pred CChhh--hcCC--CCCEEEEEEcc-cccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCC
Q psy6548 10 KQVPA--KLKS--NPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPD 84 (242)
Q Consensus 10 ~d~~~--~~~~--~~~~~~i~~e~-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 84 (242)
+|+++ +.+. .+++++|++|| +++++|.++|+++++++|+++|++||+++|+||+|+||+++|..++.+.+++.||
T Consensus 218 ~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd 297 (457)
T 3tfu_A 218 AYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD 297 (457)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce
Confidence 56776 3343 26899999999 9999999999999999999999999999999999999999998777788899999
Q ss_pred EEEeeccccCCccchheeEeChhhhhccC---CC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy6548 85 IVILGKALSGGLYPISAVLADDEVMGTLV---PG--THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 85 ~~~~sK~~~~g~~~~g~~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~ 159 (242)
+++|||+++||++|+|++++++++++.+. .. .++.++++|+++++++.++++.++++++.++++++++++++.|
T Consensus 298 iit~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L- 376 (457)
T 3tfu_A 298 IMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGL- 376 (457)
T ss_dssp EEEECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH-
T ss_pred EEEEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999988669999999999988883 33 6788999999999999999998888889999999999999999
Q ss_pred hhcCC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 160 SRLSP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 160 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+.+.. ......++.|.++++++... .+..++.+.|+++||++.+. ++.+|++|++.+|+|++++++++|+++++++.
T Consensus 377 ~~l~~~~~v~~vr~~G~~~~i~l~~~-~~~~~~~~~l~~~Gv~v~~~-~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 377 DTARALPAVTDVRVCGAIGVIECDRP-VDLAVATPAALDRGVWLRPF-RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp GGGGGSTTEEEEEECSSCEEEEESSC-CCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCCeeeeecCCeEEEEEECCc-ccHHHHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 66642 23345677899999999876 56789999999999999987 47999999999999999999999999998764
Q ss_pred h
Q psy6548 239 A 239 (242)
Q Consensus 239 ~ 239 (242)
.
T Consensus 455 ~ 455 (457)
T 3tfu_A 455 S 455 (457)
T ss_dssp -
T ss_pred c
Confidence 3
No 10
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.2e-36 Score=263.17 Aligned_cols=220 Identities=30% Similarity=0.521 Sum_probs=193.0
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|++||+++++|.++++++++++|+++|++||+++|+||+|+||+++|..+..+++++.||+++|||++++|++|+
T Consensus 220 ~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~l 299 (460)
T 3gju_A 220 ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPL 299 (460)
T ss_dssp GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCC
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCe
Confidence 68999999999999999999999999999999999999999999999999987777778899999999999999886799
Q ss_pred heeEeChhhhhcc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCeEe
Q psy6548 100 SAVLADDEVMGTL-------VPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-DIVPVVR 171 (242)
Q Consensus 100 g~~~~~~~~~~~l-------~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~ 171 (242)
|++++++++++.+ ....++.+++.|+++++++.++++.++.+++.++++++.+++++.|.+.+.. ......+
T Consensus 300 g~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 379 (460)
T 3gju_A 300 SGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR 379 (460)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE
T ss_pred EEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe
Confidence 9999999999888 4456888999999999999999998887888899999999999999444442 3445677
Q ss_pred eeceeEEEEecCCc----------hhHHHHHHHHHHCCceeccCC-CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 172 GKGLLNAIVLDKSI----------LEVYDVCIKMKDAGLVTKPIS-NNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 172 ~~~~~~~~~~~~~~----------~~~~~~~~~l~~~gi~~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
+.|.++++++..+. ....++.+.|+++||++.+.+ .+++|++|++.+|++++++++++|+++++++.+
T Consensus 380 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 380 GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88999999887541 126689999999999999875 489999999999999999999999999988754
No 11
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=1.4e-36 Score=262.11 Aligned_cols=230 Identities=32% Similarity=0.563 Sum_probs=196.9
Q ss_pred cccCCCC---------hhh--hcCC---CCCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCc
Q psy6548 5 FPVKSKQ---------VPA--KLKS---NPNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR 69 (242)
Q Consensus 5 ~~~~~~d---------~~~--~~~~---~~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~ 69 (242)
+.+|||| +++ +.+. .+++++|++||+ +| +|.++|+++++++|+++|++||+++|+||+|+||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~ 263 (452)
T 3n5m_A 185 YRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGR 263 (452)
T ss_dssp TTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred ccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCc
Confidence 4567788 777 3443 368999999999 89 999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCEEEeeccccCCccchheeEeChhhhhccCC------CCCCCCCCCCHHHHHHHHHHHHHHHhccH
Q psy6548 70 TGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP------GTHGSTYGGNPLACKLAMTALDVILEENM 143 (242)
Q Consensus 70 ~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~a~a~l~~~~~~~~ 143 (242)
+|..++.+.+++.||+++|||++++||+|+|++++++++++.+.+ ..++.+++.|+++++++.++++.++.+++
T Consensus 264 ~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 343 (452)
T 3n5m_A 264 TGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENL 343 (452)
T ss_dssp TSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 998777888899999999999999887899999999999998853 24678999999999999999998887888
Q ss_pred HHHHHHHHHHHHHHHHhhc-CC-CCCCeEeeeceeEEEEecCCc--------hhHHHHHHHHHHCCceeccCC------C
Q psy6548 144 IENAYKMGEIFRSELRSRL-SP-DIVPVVRGKGLLNAIVLDKSI--------LEVYDVCIKMKDAGLVTKPIS------N 207 (242)
Q Consensus 144 ~~~~~~~~~~l~~~l~~~l-~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~gi~~~~~~------~ 207 (242)
.++++++++++++.| +++ .. ......++.|.++++++.... ....++++.|+++||++.+.+ +
T Consensus 344 ~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~ 422 (452)
T 3n5m_A 344 IERSAQMGSLLLEQL-KEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYN 422 (452)
T ss_dssp HHHHHHHHHHHHHHH-HHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCC
T ss_pred HHHHHHHHHHHHHHH-HHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCC
Confidence 999999999999999 554 32 334556788888888874321 124678999999999999875 6
Q ss_pred CEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 208 NIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 208 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+++|++|++.+|++++++++++|++++++
T Consensus 423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 423 NILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999998764
No 12
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=2e-36 Score=261.27 Aligned_cols=222 Identities=37% Similarity=0.600 Sum_probs=195.2
Q ss_pred CCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCc
Q psy6548 17 KSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGL 96 (242)
Q Consensus 17 ~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~ 96 (242)
+..+++++|++||+++++|.++++++++++|+++|++||++||+||+|+||+++|..++.+++++.||+++|||++++|
T Consensus 221 i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G- 299 (453)
T 4ffc_A 221 IGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGG- 299 (453)
T ss_dssp TCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTT-
T ss_pred cCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCC-
Confidence 3456899999999999999999999999999999999999999999999999998877778889999999999999999
Q ss_pred cchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CCCCCeEeeec
Q psy6548 97 YPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PDIVPVVRGKG 174 (242)
Q Consensus 97 ~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~~~~~~~~~~ 174 (242)
+|+||+++++++++.+.+..++.++++|+++++++.++++.++.+++.++++++++++++.| +++. ......+++.|
T Consensus 300 ~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~~~~g 378 (453)
T 4ffc_A 300 MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRL-SALAEEVDIIGEVRGRG 378 (453)
T ss_dssp SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHHCSSEEEEEEET
T ss_pred cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-HHHHhhCCCeEEEEeec
Confidence 99999999999999999888899999999999999999998877888999999999999999 5442 12345567889
Q ss_pred eeEEEEecC------CchhHHHHHHHHHHCCceeccCCC--CEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 175 LLNAIVLDK------SILEVYDVCIKMKDAGLVTKPISN--NIIRLSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 175 ~~~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
.++++++.. +......+.+.|+++||++.+++. +.+|+++++.++++++++++++|+++++++.++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 379 AMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp TEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred eEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999998843 114577899999999999998754 899999999999999999999999999987654
No 13
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=1.3e-36 Score=262.03 Aligned_cols=228 Identities=33% Similarity=0.589 Sum_probs=198.0
Q ss_pred Chhh--hcCC--CCCEEEEEEcccc-cCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCE
Q psy6548 11 QVPA--KLKS--NPNICAFMVEPIQ-GEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDI 85 (242)
Q Consensus 11 d~~~--~~~~--~~~~~~i~~e~~~-~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 85 (242)
|+++ +.+. .+++++|++||++ +++|.++++++++++|+++|++||++||+||+|+||+++|..++.+.+++.||+
T Consensus 196 d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di 275 (448)
T 3dod_A 196 CLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDL 275 (448)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred HHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCE
Confidence 4666 3343 4689999999998 999999999999999999999999999999999999999887777888999999
Q ss_pred EEeeccccCCccchheeEeChhhhhccCC-------CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q psy6548 86 VILGKALSGGLYPISAVLADDEVMGTLVP-------GTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 86 ~~~sK~~~~g~~~~g~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l 158 (242)
+++||++++|++|+|++++++++++.+.+ ..++++++.++++++++.++++.++.+++.++++++.+++++.|
T Consensus 276 ~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l 355 (448)
T 3dod_A 276 MAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLL 355 (448)
T ss_dssp EEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99999999993499999999999999876 66788999999999999999998887888999999999999999
Q ss_pred HhhcCC-CCCCeEeeeceeEEEEecCCch----------hHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHH
Q psy6548 159 RSRLSP-DIVPVVRGKGLLNAIVLDKSIL----------EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGL 227 (242)
Q Consensus 159 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~ 227 (242)
+++.. ......++.|.++++.+..+.. ...++++.|+++||++.|.+ +++|++|++.+|++++++++
T Consensus 356 -~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i~~~l 433 (448)
T 3dod_A 356 -QDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMV 433 (448)
T ss_dssp -HHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHHHHHH
T ss_pred -HHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHHHHHH
Confidence 44543 3344567789999999876411 14789999999999999985 89999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q psy6548 228 DIIINTINTMAAK 240 (242)
Q Consensus 228 ~~l~~~l~~~~~~ 240 (242)
++|+++++++...
T Consensus 434 ~~l~~~l~~~~~~ 446 (448)
T 3dod_A 434 AIMKQAIHEVTSL 446 (448)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcc
Confidence 9999999987654
No 14
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=9.3e-36 Score=254.82 Aligned_cols=233 Identities=34% Similarity=0.587 Sum_probs=196.7
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|++|+++ +...++++++|++||+++++|.++++.+++++|+++|++||+++|+||+|+||+++|..+.++.+++.
T Consensus 183 ~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~ 262 (420)
T 2pb2_A 183 IIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVT 262 (420)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC
T ss_pred eEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCC
Confidence 56678899998 54445689999999999988877899999999999999999999999999999888876655667888
Q ss_pred CCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 83 PDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 83 ~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|++++||++++| +|+|++++++++++.+.+..++.+++.|+++++++.++++.++.+++.++++++++++++.| +.+
T Consensus 263 ~diit~sK~l~~G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L-~~~ 340 (420)
T 2pb2_A 263 PDILTSAKALGGG-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHL-QAI 340 (420)
T ss_dssp CSEEEECGGGGTT-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCeEEecccccCC-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999 89999999999988888766778889999999999999998876678899999999999999 554
Q ss_pred C--CCCCCeEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 163 S--PDIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 163 ~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
. .......++.|.+++++++... .+..++.+.|.++||.+.+++++.+|++|++..+++++++++++|+++++++.
T Consensus 341 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 341 DEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp HHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 2 1223345677899999887531 14788999999999999998889999999999999999999999999988754
No 15
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=3.4e-36 Score=260.23 Aligned_cols=219 Identities=29% Similarity=0.483 Sum_probs=192.1
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|++||+++++|.++++++++++|+++|++||+++|+||+|+||+++|..++.+++++.||+++|||++++|++|+
T Consensus 218 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~l 297 (459)
T 4a6r_A 218 DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPI 297 (459)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCC
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCc
Confidence 68999999999999999999999999999999999999999999999999997777778899999999999999765899
Q ss_pred heeEeChhhhhccC---CCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHHHHhhcCC-CCCCeEeeec
Q psy6548 100 SAVLADDEVMGTLV---PGTHGSTYGGNPLACKLAMTALDVILEENMIENAY-KMGEIFRSELRSRLSP-DIVPVVRGKG 174 (242)
Q Consensus 100 g~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~-~~~~~~~~~~ 174 (242)
|++++++++++.+. +..++.+|+.|+++++++.++++.++.+++.++++ ++.+++++.|.+.+.. ......++.|
T Consensus 298 g~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 377 (459)
T 4a6r_A 298 GAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVG 377 (459)
T ss_dssp EEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEET
T ss_pred cceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 99999999998886 55577899999999999999999888788889999 8999999888445542 3445677889
Q ss_pred eeEEEEecCCc----------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 175 LLNAIVLDKSI----------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 175 ~~~~~~~~~~~----------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
.++++++..+. .....+.+.|+++||++.+++ +++|++|++.+|++++++++++|+++++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 378 MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999887531 126789999999999999986 89999999999999999999999999988653
No 16
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=2.1e-35 Score=254.79 Aligned_cols=216 Identities=37% Similarity=0.672 Sum_probs=192.4
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYP 98 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~ 98 (242)
.+++++|++||+++++|.++++++|+++|+++|++||++||+||+|+||+++|..++.+++++.||+++|||++++| +|
T Consensus 225 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ 303 (451)
T 3oks_A 225 ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGG-LP 303 (451)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SS
T ss_pred CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCC-cc
Confidence 46899999999999999999999999999999999999999999999999998877778889999999999999999 99
Q ss_pred hheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CCCCCeEeeecee
Q psy6548 99 ISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PDIVPVVRGKGLL 176 (242)
Q Consensus 99 ~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~~~~~~~~~~~~ 176 (242)
+||+++++++++.+.+..++.++++|+++++++.++++.++++++.++++++++++++.| +++. ......+++.|.+
T Consensus 304 iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~G~~ 382 (451)
T 3oks_A 304 LSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRL-GRLQAEDDRIGDVRGRGAM 382 (451)
T ss_dssp CEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHHCTTEEEEEEETTE
T ss_pred eEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH-HHHHhhCCCeEEEEEeeEE
Confidence 999999999999999888899999999999999999998877788999999999999999 5442 1234566788999
Q ss_pred EEEEecC------CchhHHHHHHHHHHCCceeccCCC--CEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 177 NAIVLDK------SILEVYDVCIKMKDAGLVTKPISN--NIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 177 ~~~~~~~------~~~~~~~~~~~l~~~gi~~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+++.+.. .......+.+.|+++||++.+++. +.+|++|++.++++++++++++|++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 383 IAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 9998843 114577899999999999998754 89999999999999999999999998864
No 17
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-35 Score=254.08 Aligned_cols=233 Identities=23% Similarity=0.315 Sum_probs=199.3
Q ss_pred cccccCCCChhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccccc
Q psy6548 3 LQFPVKSKQVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 78 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~ 78 (242)
.++.+||||+++ +.+. .+++++|++||+++++|.++|+++++++|+++|++||++||+||+|+|| +.|..++.+.
T Consensus 180 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~ 258 (434)
T 3l44_A 180 EVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDL 258 (434)
T ss_dssp TEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHH
T ss_pred ceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHH
Confidence 456789999998 4444 2689999999999999999999999999999999999999999999999 8887666677
Q ss_pred CCCCCCEEEeeccccCCccchheeEeChhhhhccCC---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 79 EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP---GTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 79 ~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
+++.||++++||++++| +|+|++++++++++.+.+ ..++.+++.|+++++++.++++.++++++.+++++++++++
T Consensus 259 ~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~ 337 (434)
T 3l44_A 259 LGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLE 337 (434)
T ss_dssp HTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred cCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 88999999999999999 999999999999998876 34678899999999999999998877788999999999999
Q ss_pred HHHHhhcC--CCCCCeEeeeceeEEEEecCC------------chhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHH
Q psy6548 156 SELRSRLS--PDIVPVVRGKGLLNAIVLDKS------------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQ 221 (242)
Q Consensus 156 ~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e 221 (242)
+.| +++. .......++.|.++++.+... .....++.+.|+++||++.+++.+.+|++ +.+|++
T Consensus 338 ~~L-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~--~~~t~e 414 (434)
T 3l44_A 338 KGI-LEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLT--TEHTKE 414 (434)
T ss_dssp HHH-HHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECC--TTCCHH
T ss_pred HHH-HHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEe--cccCHH
Confidence 999 5542 123445677889999988432 12357789999999999999887888986 789999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q psy6548 222 ELREGLDIIINTINTMAAK 240 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~~~~ 240 (242)
++++++++|+++++++.++
T Consensus 415 ~i~~~l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 415 DIEYTIEAVGRAFAALADN 433 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987653
No 18
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=4.7e-35 Score=251.61 Aligned_cols=231 Identities=29% Similarity=0.548 Sum_probs=199.6
Q ss_pred ccccCCC----------Chhh--hcCC---CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC
Q psy6548 4 QFPVKSK----------QVPA--KLKS---NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG 68 (242)
Q Consensus 4 ~~~~~~~----------d~~~--~~~~---~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 68 (242)
+..+|++ |+++ +.+. ++++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+||+
T Consensus 169 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g 248 (439)
T 3dxv_A 169 PYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLA 248 (439)
T ss_dssp CCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred cEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 3566776 5777 4442 67899999999999999999999999999999999999999999999998
Q ss_pred ccCcccccccCCCCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Q psy6548 69 RTGKLLAIHYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAY 148 (242)
Q Consensus 69 ~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~ 148 (242)
+.|..+..+.+++.+|++++||++++| +|+||+++++++++.+.+..+..++ .++++++++.++++.++.+++.++++
T Consensus 249 ~~g~~~~~~~~~~~~di~s~sK~~~~G-~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~ 326 (439)
T 3dxv_A 249 RSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAE 326 (439)
T ss_dssp TTSSSSGGGGTTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred cCchhhHHHhcCCCCCEEEEcchhcCC-cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 888767778888999999999999999 7999999999999999887778899 99999999999999887788899999
Q ss_pred HHHHHHHHHHHhhcC--CCCCCeEeeeceeEEEEec--------CCchhHHHHHHHHHHCCceeccCCC--CEEEEeccC
Q psy6548 149 KMGEIFRSELRSRLS--PDIVPVVRGKGLLNAIVLD--------KSILEVYDVCIKMKDAGLVTKPISN--NIIRLSPAL 216 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~gi~~~~~~~--~~lR~~~~~ 216 (242)
++++++++.| +++. .......++.|.++++++. .. .+..++.+.|+++||.+.+++. +++|+++++
T Consensus 327 ~~~~~~~~~l-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~ 404 (439)
T 3dxv_A 327 RKGRLLRDGL-SELAKRHPLIGDIRGRGLACGMELVCDRQSREPAR-AETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPL 404 (439)
T ss_dssp HHHHHHHHHH-HHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECH-HHHHHHHHHHHHHTEECEEESTTSCEEEECCCT
T ss_pred HHHHHHHHHH-HHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCH-HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCC
Confidence 9999999999 5542 1234456778889998873 32 5678899999999999998754 899999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHh
Q psy6548 217 NITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 217 ~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.++++++++++++|+++++++.
T Consensus 405 ~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 405 TITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp TCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 19
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-34 Score=244.16 Aligned_cols=227 Identities=43% Similarity=0.790 Sum_probs=199.9
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..++++|+++ +...++++++|++++++|++|.+.++++++++|+++|++||+++|+||+|++|++.|..+....++..
T Consensus 164 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 243 (392)
T 3ruy_A 164 IIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVT 243 (392)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred CeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCC
Confidence 55688999998 55445799999999999999999989999999999999999999999999999888876666777888
Q ss_pred CCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 83 PDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 83 ~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|++++||+++||++|+||+++++++++.+.+...+.+++.++++++++.++++.+..+++.++++++++++++.| +++
T Consensus 244 ~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~ 322 (392)
T 3ruy_A 244 PDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQL-KEI 322 (392)
T ss_dssp CSEEEECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TTC
T ss_pred CCEEEEchhhhCChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHh
Confidence 9999999999988789999999999999998887888999999999999999998877778899999999999999 776
Q ss_pred CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 163 SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
+.......++.+.++++.++. +..++.+.|.++||.+.+++.+++|+++++.++++++++++++|++++
T Consensus 323 ~~~~~~~~~~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 323 DNPMITEVRGKGLFIGIELNE---PARPYCEQLKAAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCTTEEEEEEETTEEEEEESS---CSHHHHHHHHTTTEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEeeeeEEEEEEcc---hHHHHHHHHHHCCcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 533344456678888888765 467899999999999999988999999999999999999999998875
No 20
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=4.2e-35 Score=251.27 Aligned_cols=217 Identities=33% Similarity=0.571 Sum_probs=185.7
Q ss_pred CCEEEEEEccccc-CCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-CCCCCEEEeeccccCCcc
Q psy6548 20 PNICAFMVEPIQG-EAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE-DVRPDIVILGKALSGGLY 97 (242)
Q Consensus 20 ~~~~~i~~e~~~~-~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~sK~~~~g~~ 97 (242)
+++++|++||+++ ++|.++++++++++|+++|++||+++|+||+|+||++.|..++.+.+ ++.+|+++|||++++||+
T Consensus 189 ~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~ 268 (430)
T 3i4j_A 189 ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYA 268 (430)
T ss_dssp GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSS
T ss_pred CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCcc
Confidence 7899999999999 99999999999999999999999999999999999998887777888 899999999999999988
Q ss_pred chheeEeChhhhhccCCC----CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CCCCCeEe
Q psy6548 98 PISAVLADDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PDIVPVVR 171 (242)
Q Consensus 98 ~~g~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~~~~~~~ 171 (242)
|+||+++++++++.+.+. .++.+++.|+++++++.++++.++++++.++++++++++++.| +++. .......+
T Consensus 269 r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 347 (430)
T 3i4j_A 269 PLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGL-QALQARFPQMMQVR 347 (430)
T ss_dssp CCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHHCTTEEEEE
T ss_pred ccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHHHHhCCCeEEEE
Confidence 999999999998888753 5778899999999999999998877888999999999999999 5442 12344567
Q ss_pred eeceeEEEEecCC--------chhHHHHHHHHHHCCceeccC-------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 172 GKGLLNAIVLDKS--------ILEVYDVCIKMKDAGLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 172 ~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~~~~~-------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+.|.++++++.+. .....++.+.|+++||++.++ +++++|+++++.++++++++++++|++++++
T Consensus 348 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 348 GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp EETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 7889999988632 012467999999999999986 4678999999999999999999999999987
Q ss_pred H
Q psy6548 237 M 237 (242)
Q Consensus 237 ~ 237 (242)
+
T Consensus 428 ~ 428 (430)
T 3i4j_A 428 V 428 (430)
T ss_dssp H
T ss_pred h
Confidence 5
No 21
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=1.7e-34 Score=247.61 Aligned_cols=224 Identities=29% Similarity=0.483 Sum_probs=188.0
Q ss_pred hhh--hcCCC---CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 12 VPA--KLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 12 ~~~--~~~~~---~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
+++ +.+.+ +++++|++||+++++|.++++++++++|+++|++||+++|+||+|+||++.|..+.++.+++.+|++
T Consensus 189 ~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~ 268 (433)
T 1zod_A 189 LDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL 268 (433)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE
Confidence 666 33432 6899999999999999889999999999999999999999999999998887755656678889999
Q ss_pred EeeccccCCccchheeEeChhhhhccCCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC-
Q psy6548 87 ILGKALSGGLYPISAVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS- 163 (242)
Q Consensus 87 ~~sK~~~~g~~~~g~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~- 163 (242)
++||+|++| +|+||+++++++++.+.+. .++.+++.|+++++++.++++.++++++.++++++++++++.| +.+.
T Consensus 269 s~sK~~~~G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l-~~l~~ 346 (433)
T 1zod_A 269 TLSKTLGAG-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGL-LDLME 346 (433)
T ss_dssp EECHHHHTT-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHH
T ss_pred EecccccCC-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999 9999999999998877653 2447888999999999999998877788899999999999999 6552
Q ss_pred -CCCCCeEeeeceeEEEEecCC-------chhHHHHHHHHHHCCceeccCC--C--CEEEEeccCcCCHHHHHHHHHHHH
Q psy6548 164 -PDIVPVVRGKGLLNAIVLDKS-------ILEVYDVCIKMKDAGLVTKPIS--N--NIIRLSPALNITEQELREGLDIII 231 (242)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~~~~~~--~--~~lR~~~~~~~t~e~i~~~~~~l~ 231 (242)
.......++.|.+++++++.. .....++.+.|+++||.+.+++ . +++|+++++.++++++++++++|+
T Consensus 347 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~ 426 (433)
T 1zod_A 347 RFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLG 426 (433)
T ss_dssp HCTTEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred hCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 122334567788999887642 1246789999999999998864 2 899999999999999999999999
Q ss_pred HHHHHH
Q psy6548 232 NTINTM 237 (242)
Q Consensus 232 ~~l~~~ 237 (242)
++++++
T Consensus 427 ~~l~~~ 432 (433)
T 1zod_A 427 QAIERA 432 (433)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
No 22
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.2e-33 Score=240.04 Aligned_cols=236 Identities=35% Similarity=0.589 Sum_probs=201.9
Q ss_pred cccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 3 LQFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 3 ~~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
.+..+|++|+++ +...++++++|+++|+++++|..+++.+++++|+++|++||+++|+||+|+||++.|..+....++.
T Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 243 (406)
T 4adb_A 164 DIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV 243 (406)
T ss_dssp SEEEECTTCHHHHHTTCSTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC
T ss_pred CceEeCCCcHHHHHHHhcCCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC
Confidence 345678899999 5555678999999988777776667899999999999999999999999999988887666666788
Q ss_pred CCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh
Q psy6548 82 RPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 82 ~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 161 (242)
.+|+++|||++++| +|+||+++++++++.+.+..++.+++.++++++++.++++.++.+++.++++++++++++.| +.
T Consensus 244 ~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l-~~ 321 (406)
T 4adb_A 244 TPDLLTTAKALGGG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERL-NT 321 (406)
T ss_dssp CCSEEEECGGGGTT-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH-HH
T ss_pred CCCEEEechhhcCC-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HH
Confidence 89999999999999 89999999999999998877888999999999999999998766778899999999999999 55
Q ss_pred cCC--CCCCeEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 162 LSP--DIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 162 l~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+.. .......+.+.++++.++... .+..++.+.|.++||.+.+++.+++|++++..++++++++++++|+++++++.
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 322 INHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp HHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 431 233345667889999988741 25788999999999999999889999999999999999999999999999876
Q ss_pred hh
Q psy6548 239 AK 240 (242)
Q Consensus 239 ~~ 240 (242)
++
T Consensus 402 ~~ 403 (406)
T 4adb_A 402 SR 403 (406)
T ss_dssp C-
T ss_pred hc
Confidence 53
No 23
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=7.8e-34 Score=242.77 Aligned_cols=208 Identities=36% Similarity=0.664 Sum_probs=175.8
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|+++|+++++|.++++++++++|+++|++||+++|+||+|++|++.|..+..+.+++.+|+++|||++++|++|+
T Consensus 211 ~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~ri 290 (419)
T 2eo5_A 211 EEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPI 290 (419)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCC
T ss_pred CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccce
Confidence 57899999999999998899999999999999999999999999999988876555666788899999999999887899
Q ss_pred heeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEE
Q psy6548 100 SAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAI 179 (242)
Q Consensus 100 g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 179 (242)
||++++++++ .+ ...+..+++.|+++++++.++++.+++ +.++++++++++++.| +.+ ....++.|.++++
T Consensus 291 G~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L-~~~----~~~~~~~g~~~~i 361 (419)
T 2eo5_A 291 GATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEEL-QGL----ADDVRGIGLAWGL 361 (419)
T ss_dssp EEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-TTS----SSEEEEETTEEEE
T ss_pred EEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHh----hhheEeeeEEEEE
Confidence 9999998887 66 445677899999999999999987654 7888999999999999 655 3455778899999
Q ss_pred EecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 180 VLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 180 ~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
++........ +.+.|.++||.+.+++.+++|+++++.+|++++++++++|+++++++
T Consensus 362 ~~~~~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 362 EYNEKKVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ECSCHHHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEecCccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8843212356 99999999999999878899999999999999999999999988764
No 24
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=7.5e-34 Score=243.48 Aligned_cols=228 Identities=23% Similarity=0.378 Sum_probs=194.1
Q ss_pred ccccCCCChhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||||+++ +.+. .+++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+|| ++|..+..+.+
T Consensus 179 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~ 257 (429)
T 4e77_A 179 TLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYY 257 (429)
T ss_dssp EEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHT
T ss_pred eeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhc
Confidence 45678999998 4443 3689999999999999999999999999999999999999999999999 88876777888
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
++.||++++||++++| +|+|++++++++++.+.+. .++++++.|+++++++.++++.++.+++.++++++++++++
T Consensus 258 ~~~pdi~t~sK~~~~G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 336 (429)
T 4e77_A 258 HVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLAT 336 (429)
T ss_dssp TCCCSEEEEEGGGGTT-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred CCCCCeeeecccccCC-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9999999999999999 8999999999999988764 46788899999999999999988777889999999999999
Q ss_pred HHHhhc-C-CCCCCeEeeeceeEEEEecCCc-------------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHH
Q psy6548 157 ELRSRL-S-PDIVPVVRGKGLLNAIVLDKSI-------------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQ 221 (242)
Q Consensus 157 ~l~~~l-~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e 221 (242)
.| +++ . .......++.|.++++.++... ....++.+.|+++||++.+++...+|++ +.+|++
T Consensus 337 ~L-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~e 413 (429)
T 4e77_A 337 GL-RHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAFEAGFMS--LAHSNE 413 (429)
T ss_dssp HH-HHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTTSCEECC--TTCCHH
T ss_pred HH-HHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCCCCEEEe--ccCCHH
Confidence 99 544 2 1345567788999999987641 2347899999999999999877766654 889999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6548 222 ELREGLDIIINTINT 236 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~ 236 (242)
++++++++|++++++
T Consensus 414 ~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 414 DIQKTVNAARRCFAK 428 (429)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 25
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=7.2e-34 Score=243.40 Aligned_cols=228 Identities=22% Similarity=0.334 Sum_probs=194.1
Q ss_pred ccccCCCChhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||||+++ +.+.+ +++++|++||+++++|.++++++++++|+++|++||++||+||+|+|| +.|..+..+.+
T Consensus 178 ~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~ 256 (427)
T 3fq8_A 178 TLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKF 256 (427)
T ss_dssp EEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHT
T ss_pred eeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhc
Confidence 56788999998 44443 489999999999999999999999999999999999999999999999 77776666788
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
++.||++++||++++| +|+|++++++++++.+.+. .++.+++.|+++++++.++++.++++++.++++++++++++
T Consensus 257 ~~~~di~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~ 335 (427)
T 3fq8_A 257 GVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSD 335 (427)
T ss_dssp TCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred CCCCChhhhhhhhhCC-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8999999999999999 8999999999999988763 46778899999999999999988777889999999999999
Q ss_pred HHHhhcC--CCCCCeEeeeceeEEEEecCCc------------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 157 ELRSRLS--PDIVPVVRGKGLLNAIVLDKSI------------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 157 ~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
.| +++. .......++.|.++++.+.... ....++.+.|.++||++.+++.. |+++++.+|+++
T Consensus 336 ~l-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~--r~~~~~~~t~e~ 412 (427)
T 3fq8_A 336 GL-LAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE--AGFTSLAHTEED 412 (427)
T ss_dssp HH-HHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTS--CEECCTTCCHHH
T ss_pred HH-HHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCCC--CEEeeCcCCHHH
Confidence 99 5442 1344566788999999886531 12567999999999999998765 445568999999
Q ss_pred HHHHHHHHHHHHHH
Q psy6548 223 LREGLDIIINTINT 236 (242)
Q Consensus 223 i~~~~~~l~~~l~~ 236 (242)
+++++++|++++++
T Consensus 413 i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 413 IDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 26
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.9e-33 Score=242.47 Aligned_cols=212 Identities=31% Similarity=0.496 Sum_probs=183.9
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYP 98 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~ 98 (242)
++++++|++||++|++|.++++++++++|+++|++||+++|+||+|+||+++|..+.++.+++.+|++++||++ |
T Consensus 229 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~ 303 (449)
T 2cjg_A 229 PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----Q 303 (449)
T ss_dssp TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----S
T ss_pred CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----c
Confidence 46899999999999999899999999999999999999999999999999988766666778899999999998 5
Q ss_pred hheeEeChhhhhcc-----CCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CCC-CCeE
Q psy6548 99 ISAVLADDEVMGTL-----VPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PDI-VPVV 170 (242)
Q Consensus 99 ~g~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~~-~~~~ 170 (242)
+|++++++++++.+ .+..++++++.|+++++++.++++.++++++.++++++++++++.| +++. ... ....
T Consensus 304 iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~~~~~~~ 382 (449)
T 2cjg_A 304 VCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARL-DELAADFPAVVLDP 382 (449)
T ss_dssp SEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HHHHHHSTTTSEEE
T ss_pred EEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHhhCCCceeeE
Confidence 89999999988863 3345678899999999999999998877778899999999999999 6552 122 3456
Q ss_pred eeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 171 RGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
++.|.+++++++.. .+..++.+.|.++||.+.+++.+++|++|++.+|++++++++++|+++++++
T Consensus 383 ~~~g~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 383 RGRGLMCAFSLPTT-ADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp EEETTEEEEECSSH-HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eeccEEEEEEECCh-HHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 67888999988764 4577899999999999999888999999999999999999999999998764
No 27
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=2.4e-34 Score=246.66 Aligned_cols=229 Identities=23% Similarity=0.345 Sum_probs=194.9
Q ss_pred cccccCCCChhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccccc
Q psy6548 3 LQFPVKSKQVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY 78 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~ 78 (242)
.++.+||||+++ +.+. .+++++|++||+++++|.++++++++++|+++|++||+++|+||+|+|| +.|..+..+.
T Consensus 178 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~ 256 (429)
T 3k28_A 178 NTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGY 256 (429)
T ss_dssp TEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHH
T ss_pred ceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHH
Confidence 456788999998 4444 3689999999999999999999999999999999999999999999999 8887666677
Q ss_pred CCCCCCEEEeeccccCCccchheeEeChhhhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 79 EDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 79 ~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
+++.+|++++||++++| +|+|++++++++++.+.+. .++++++.|+++++++.++++.++ +++.+++++++++++
T Consensus 257 ~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~ 334 (429)
T 3k28_A 257 YGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLE 334 (429)
T ss_dssp HTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHH
T ss_pred hCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 88999999999999999 9999999999999988653 367789999999999999998765 668889999999999
Q ss_pred HHHHhhcC--CCCCCeEeeeceeEEEEecCCc------------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHH
Q psy6548 156 SELRSRLS--PDIVPVVRGKGLLNAIVLDKSI------------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQ 221 (242)
Q Consensus 156 ~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e 221 (242)
+.| +++. .......++.|.++++.+.... ....++.+.|+++||++.+++.+.+|++ +.+|++
T Consensus 335 ~~L-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e 411 (429)
T 3k28_A 335 AGL-RKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDA 411 (429)
T ss_dssp HHH-HHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHH
T ss_pred HHH-HHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHH
Confidence 999 5542 2345567788999999875421 2357889999999999999888888886 789999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6548 222 ELREGLDIIINTINTM 237 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~ 237 (242)
++++++++|+++++++
T Consensus 412 ~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 412 DIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 28
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=2.1e-33 Score=241.07 Aligned_cols=230 Identities=21% Similarity=0.350 Sum_probs=192.9
Q ss_pred ccccCCCChhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||+|+++ +.+.+ +++++|++||+++++|.++++++++++|+++|++||+++|+||+|+|| +.|..+..+.+
T Consensus 182 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~ 260 (434)
T 2epj_A 182 TLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYF 260 (434)
T ss_dssp EEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHH
T ss_pred eEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHh
Confidence 56788999998 44443 589999999999999988999999999999999999999999999988 66665566677
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
++.||++++||++++| +|+|++++++++++.+.+. .++++|+.|+++++++.++++.++++++.++++++++++++
T Consensus 261 ~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~ 339 (434)
T 2epj_A 261 NIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEE 339 (434)
T ss_dssp TCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CCCCCeeeecchhcCC-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8889999999999999 8999999999999988762 35678899999999999999988777889999999999999
Q ss_pred HHHhhcC--CCCCCeEeeeceeEEEEecCC------------chhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 157 ELRSRLS--PDIVPVVRGKGLLNAIVLDKS------------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 157 ~l~~~l~--~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
.| +.+. .......++.|.++++.++.. .....++.+.|+++||.+.+++...+|+ ++.+|+++
T Consensus 340 ~L-~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~ 416 (434)
T 2epj_A 340 AA-SEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNLEAVFT--GLPHQGEA 416 (434)
T ss_dssp HH-HHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCSHHH
T ss_pred HH-HHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCCCcEEE--eccCCHHH
Confidence 99 5542 123334567889999998751 1346789999999999999986665554 48899999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6548 223 LREGLDIIINTINTMA 238 (242)
Q Consensus 223 i~~~~~~l~~~l~~~~ 238 (242)
+++++++|+++++++.
T Consensus 417 i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 417 LEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 29
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.7e-33 Score=241.28 Aligned_cols=226 Identities=31% Similarity=0.528 Sum_probs=189.2
Q ss_pred CChhh--hcCCC--CCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCC
Q psy6548 10 KQVPA--KLKSN--PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPD 84 (242)
Q Consensus 10 ~d~~~--~~~~~--~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 84 (242)
+|+++ +.+.+ +++++|+++|+ +|++|.++|+++++++|+++|++||+++|+||+|+||++.|..+..+.+++.+|
T Consensus 189 ~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d 268 (429)
T 1s0a_A 189 RDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPD 268 (429)
T ss_dssp GGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCC
Confidence 45666 33432 68999999999 999999999999999999999999999999999999988776555666778899
Q ss_pred EEEeeccccCCccchheeEeChhhhhccCCC-----CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy6548 85 IVILGKALSGGLYPISAVLADDEVMGTLVPG-----THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 85 ~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~ 159 (242)
++++||++++|++|+||+++++++++.+.+. .+..+++.|+++++++.++++.++++++.++++++++++++.|
T Consensus 269 ~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L- 347 (429)
T 1s0a_A 269 ILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQL- 347 (429)
T ss_dssp EEEECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-
T ss_pred EEEecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-
Confidence 9999999998867999999999988877653 2556888999999999999998877778899999999999999
Q ss_pred hhcCC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 160 SRLSP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 160 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+.+.. ......++.|.+++++++.. .+..++.+.|.++||.+.+. ++++|+++++.+|++++++++++|+++++++.
T Consensus 348 ~~l~~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~Gi~v~~~-~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 348 APARDAEMVADVRVLGAIGVVETTHP-VNMAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp GGGGGCTTEEEEEEETTEEEEEESSC-BCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred HHHhcCCCEEEEEEeeEEEEEEECCc-ccHHHHHHHHHHCCCEEecc-CCEEEEECCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 66531 11223456788899998764 45778999999999999987 47999999999999999999999999876543
No 30
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=4.1e-33 Score=236.44 Aligned_cols=229 Identities=34% Similarity=0.619 Sum_probs=192.9
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|++|+++ +...++++++|++++++|++|.++++.+++++|+++|++||+++|+||+|+|+++.|.......++..
T Consensus 165 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 244 (397)
T 2ord_A 165 FEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVV 244 (397)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCC
T ss_pred eeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCC
Confidence 66788999998 54445689999999999999976888899999999999999999999999988777765444555667
Q ss_pred CCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 83 PDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 83 ~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|++++||++++| +|+||++++++++ .+.+.....+++.++++++++.++++.+..+++.++++++++++++.| +.+
T Consensus 245 ~d~~s~sK~~~~G-~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~ 321 (397)
T 2ord_A 245 PDVLTTAKGLGGG-VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKL-QEM 321 (397)
T ss_dssp CSEEEECGGGGTT-SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHH-HHH
T ss_pred CCeeeeccccCCC-cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHH
Confidence 8999999999999 8999999998887 776555677888899999999999988776678899999999999999 555
Q ss_pred C--CCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 163 S--PDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 163 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
. .......++.|.++++.++.. .+..++.+.|.++||.+.+++++++|+++++..+++++++++++|++++++
T Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 322 KEEYDVVADVRGMGLMIGIQFREE-VSNREVATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp HHHCTTEEEEEEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHhCCceEEEEEEeEEEEEEECCh-HHHHHHHHHHHHCCCEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 2 122223456788899988764 467889999999999999988899999999999999999999999998764
No 31
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=7.1e-33 Score=236.88 Aligned_cols=217 Identities=34% Similarity=0.645 Sum_probs=185.8
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|+++|+++++|.++++++++++|+++|++||+++|+||+|+||++.|..+.++.++..+|+++|||++++| +|+
T Consensus 198 ~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~G-lri 276 (426)
T 1sff_A 198 EDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPL 276 (426)
T ss_dssp GGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTS-SCC
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCC-Cce
Confidence 5899999999888888899999999999999999999999999999998877655566777889999999999999 999
Q ss_pred heeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CCCCCeEeeeceeE
Q psy6548 100 SAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PDIVPVVRGKGLLN 177 (242)
Q Consensus 100 g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~~~~~~~~~~~~~ 177 (242)
||+++++++++.+.+.....+++.++++++++.++++.++++++.++++++++++++.| +.+. .......++.|+++
T Consensus 277 G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~~~~g~~~ 355 (426)
T 1sff_A 277 AGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGL-LAIAEKHPEIGDVRGLGAMI 355 (426)
T ss_dssp EEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHTCTTEEEEEEETTEE
T ss_pred EEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HHHHHhCCCeEEEEEEEEEE
Confidence 99999999999888766777888999999999999998877778899999999999999 6543 12223345568999
Q ss_pred EEEecC-------CchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 178 AIVLDK-------SILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 178 ~~~~~~-------~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
|+++.. ...+..++.+.|.++||.+.++. ++++|+++++.++++++++++++|+++++++.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 356 AIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp EEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 999853 11457789999999999999875 68999999989999999999999999988763
No 32
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=1.6e-33 Score=242.76 Aligned_cols=216 Identities=31% Similarity=0.568 Sum_probs=185.0
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCccch
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLYPI 99 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~~~ 99 (242)
+++++|++||+++++|.++++++++++|+++|++||+++|+||+|++|+++|..+.++.+++.+|++++||++++|++|+
T Consensus 218 ~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~ 297 (449)
T 3a8u_X 218 SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPM 297 (449)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCC
T ss_pred CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCce
Confidence 58999999999999998899999999999999999999999999999988876556667788899999999999876899
Q ss_pred heeEeChhhhhccCCC---------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCe
Q psy6548 100 SAVLADDEVMGTLVPG---------THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-DIVPV 169 (242)
Q Consensus 100 g~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~ 169 (242)
|++++++++++.+... .++++++.|+++++++.++++.++++++.++++++++++++.| +.++. .....
T Consensus 298 G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~~~~ 376 (449)
T 3a8u_X 298 GAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKAL-HGIKGAKNVID 376 (449)
T ss_dssp EEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HTTTTSTTEEE
T ss_pred EEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HHHhcCCCeEE
Confidence 9999999888877653 3567888999999999999998877788999999999999999 66542 22233
Q ss_pred EeeeceeEEEEecCCc--h--hHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 170 VRGKGLLNAIVLDKSI--L--EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 170 ~~~~~~~~~~~~~~~~--~--~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.++.|.+++++++... . +..++.+.|.++||.+.+++ +++|++|++.++++++++++++|+++++++
T Consensus 377 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 377 IRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4677899999987641 1 33479999999999999975 899999999999999999999999998764
No 33
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=6.7e-34 Score=259.71 Aligned_cols=215 Identities=25% Similarity=0.400 Sum_probs=183.2
Q ss_pred CCCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeeccccCCcc
Q psy6548 19 NPNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALSGGLY 97 (242)
Q Consensus 19 ~~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~~g~~ 97 (242)
.+++++|++||+ ++.+|.++++++|+++|+++|++||+++|+||+|+|||++|..++.+++|+.||++++||+++|||+
T Consensus 592 ~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~ 671 (831)
T 4a0g_A 592 SAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMV 671 (831)
T ss_dssp -CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSS
T ss_pred CCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCcc
Confidence 468999999997 9999999999999999999999999999999999999999998888889999999999999999978
Q ss_pred chheeEeChhhhhccCCC------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH--------HHHHHHhhcC
Q psy6548 98 PISAVLADDEVMGTLVPG------THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI--------FRSELRSRLS 163 (242)
Q Consensus 98 ~~g~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~--------l~~~l~~~l~ 163 (242)
|+|++++++++++.+.+. .+++||++||+++++++++++.++++++.++++++.++ +.+.+ +..+
T Consensus 672 Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l-~~~~ 750 (831)
T 4a0g_A 672 PLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQI-SSHS 750 (831)
T ss_dssp CCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHH-HHST
T ss_pred CcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhCC
Confidence 999999999999988763 47899999999999999999999876665555443333 33344 3332
Q ss_pred CCCCCeEeeeceeEEEEecCCc-------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 164 PDIVPVVRGKGLLNAIVLDKSI-------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
....+.+.|.++++++..+. ..+..+.+.|+++|+++.|. ++.+|++|++.+|+++|++++++|++++++
T Consensus 751 --~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~-g~~lrl~pp~~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 751 --AVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL-GNVIYLMCGPCTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp --TEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB-TTEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred --CceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 45677889999999986531 34667999999999999987 489999999999999999999999999876
Q ss_pred H
Q psy6548 237 M 237 (242)
Q Consensus 237 ~ 237 (242)
+
T Consensus 828 l 828 (831)
T 4a0g_A 828 F 828 (831)
T ss_dssp T
T ss_pred h
Confidence 5
No 34
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=3.7e-32 Score=230.33 Aligned_cols=226 Identities=29% Similarity=0.502 Sum_probs=190.1
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|++|+++ +...++++++|+++|+++++|.+.++++++++|+++|++||+++|+||+|+||++.|..+..+..+..
T Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~ 246 (395)
T 1vef_A 167 VEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIV 246 (395)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC
T ss_pred eeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCC
Confidence 45567889998 44444689999999999999988899999999999999999999999999988776654444555677
Q ss_pred CCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 83 PDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 83 ~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|++++||++++| +|+|++++++++++.+.+.....+++.++++++++.++++.+..+++.++++++++++++.| +.+
T Consensus 247 ~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l-~~~ 324 (395)
T 1vef_A 247 PDILTLAKALGGG-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKL-RAI 324 (395)
T ss_dssp CSEEEECGGGGTT-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-HTS
T ss_pred CCEEEEcccccCC-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHh
Confidence 8999999999999 99999999988888888755667888899999999999988766668899999999999999 666
Q ss_pred CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 163 SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
+.......++.|.++++.++.. ..++.++|. ++||.+.+++.+++|++++..++++++++++++|++++
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~---~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 325 PSPKIREVRGMGLMVGLELKEK---AAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCTTEEEEEEETTEEEEEESSC---SHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hcCceEEEEEEEEEEEEEEcCh---HHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 5322223456788999988753 567899999 99999999888999999998999999999999998875
No 35
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-32 Score=235.43 Aligned_cols=224 Identities=25% Similarity=0.396 Sum_probs=187.6
Q ss_pred ccccCCCChhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||+|+++ +.+.+ +++++|++||+++++|.++++++++++|+++ ++||++||+||+|+|| +.|..+..+.+
T Consensus 178 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~ 255 (424)
T 2e7u_A 178 TLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELL 255 (424)
T ss_dssp EEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHH
T ss_pred eEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHh
Confidence 56788999998 44442 5899999999999999889999999999999 9999999999999998 66665566677
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPG---THGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFR 155 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~ 155 (242)
++.||++++||++++| +|+||+++++++++.+.+. .+..+++.|+++++++.++++.+++ +++.+++++++++++
T Consensus 256 ~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~ 334 (424)
T 2e7u_A 256 GLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLE 334 (424)
T ss_dssp TCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred CCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 8889999999999999 9999999999999988762 3567889999999999999998877 778999999999999
Q ss_pred HHHHhhcC--CCCCCeEeeeceeEEEEecCC------------chhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHH
Q psy6548 156 SELRSRLS--PDIVPVVRGKGLLNAIVLDKS------------ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQ 221 (242)
Q Consensus 156 ~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e 221 (242)
+.| +.+. .......++.|.++|++++.. ..+..++.+.|+++||++.+++...+|+ ++.++++
T Consensus 335 ~~L-~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~~ 411 (424)
T 2e7u_A 335 AGL-KEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNFEAAFL--SVAHREE 411 (424)
T ss_dssp HHH-HHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEEC--CTTCCHH
T ss_pred HHH-HHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCCCceEe--eccCCHH
Confidence 999 5542 123345677889999998751 1346789999999999999986665554 4889999
Q ss_pred HHHHHHHHHHHH
Q psy6548 222 ELREGLDIIINT 233 (242)
Q Consensus 222 ~i~~~~~~l~~~ 233 (242)
++++++++|+++
T Consensus 412 ~i~~~l~~l~~~ 423 (424)
T 2e7u_A 412 DVEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 36
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=1.4e-32 Score=238.32 Aligned_cols=208 Identities=24% Similarity=0.402 Sum_probs=176.9
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC--CCEEEeecc-ccCCcc
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR--PDIVILGKA-LSGGLY 97 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~~~~~~sK~-~~~g~~ 97 (242)
++++|++||+++++|.++|+++++++|+++|++||+++|+||+|+|||++|..++++.+++. ||+++|||+ ++|| +
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG-~ 336 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGG-F 336 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEE-E
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCC-c
Confidence 89999999999999999999999999999999999999999999999998876677777876 999999999 6766 3
Q ss_pred chheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC--CC-CCCeEeeec
Q psy6548 98 PISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS--PD-IVPVVRGKG 174 (242)
Q Consensus 98 ~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~--~~-~~~~~~~~~ 174 (242)
++ ++++ ..+.+..+.+|+++|+++++++.++++.++++++.++++++++++++.| +.+. .. ......+.|
T Consensus 337 ----~~-~~~~-~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L-~~l~~~~~~~v~~~~~~g 409 (472)
T 1ohv_A 337 ----FH-KEEF-RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGL-LDLQARYPQFISRVRGRG 409 (472)
T ss_dssp ----EE-CGGG-SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHHCTTTCEEEEEET
T ss_pred ----cC-chhh-cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHHHhhCCCcEEeecCCc
Confidence 33 5554 3344556788899999999999999998877788999999999999999 6652 11 233456778
Q ss_pred eeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 175 LLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.++++++... .....+.+.|+++||.+.+.+.+.+|+++++.+|++++++++++|+++++++
T Consensus 410 ~~~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 410 TFCSFDTPDE-SIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp TEEEEECSSH-HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCh-hHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8999887654 4678899999999999999877899999999999999999999999988754
No 37
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=2.2e-32 Score=235.92 Aligned_cols=228 Identities=22% Similarity=0.369 Sum_probs=185.5
Q ss_pred ccccCCCChhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||+|+++ +.+.+ +++++|++||+++++|.++++++++++|+++|++||++||+||+|+|| +.|..+..+.+
T Consensus 180 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~ 258 (453)
T 2cy8_A 180 TLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALL 258 (453)
T ss_dssp EEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHH
T ss_pred eeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHh
Confidence 56788999998 44443 589999999999989988999999999999999999999999999998 66665556667
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCC-----CCCCCCCCCCHHHHHHHHHHHHH-HHhccHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-----GTHGSTYGGNPLACKLAMTALDV-ILEENMIENAYKMGEI 153 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~a~a~l~~-~~~~~~~~~~~~~~~~ 153 (242)
++.||++++||++++| +|+|++++++++++.+.+ ..++.+++.|+++++++.++++. + .+++.+++++++++
T Consensus 259 ~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~ 336 (453)
T 2cy8_A 259 DVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQF 336 (453)
T ss_dssp TCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHH
T ss_pred CCCCcEEEEChhhhCC-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHH
Confidence 8889999999999999 899999999999998876 23566889999999999999998 7 67788999999999
Q ss_pred HHHHHHhhcC--CCCCCeEeeeceeEEEEecC-----C-------------chhHHHHHHHHHHCCceeccCCCCEEEEe
Q psy6548 154 FRSELRSRLS--PDIVPVVRGKGLLNAIVLDK-----S-------------ILEVYDVCIKMKDAGLVTKPISNNIIRLS 213 (242)
Q Consensus 154 l~~~l~~~l~--~~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~l~~~gi~~~~~~~~~lR~~ 213 (242)
+++.| +.+. .......++.|.++|++++. . .....++.+.|+++||.+.+. +.+|+
T Consensus 337 l~~~L-~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--~~~~l- 412 (453)
T 2cy8_A 337 AREAM-NHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR--GSVFL- 412 (453)
T ss_dssp HHHHH-HHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT--TEEEC-
T ss_pred HHHHH-HHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC--CCEEe-
Confidence 99999 5552 12333456778899999875 1 123678999999999999764 33554
Q ss_pred ccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 214 PALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 214 ~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++.++++++++++++|+++++++.+
T Consensus 413 -~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 413 -SAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -eccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999987643
No 38
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=2.7e-31 Score=223.40 Aligned_cols=220 Identities=31% Similarity=0.622 Sum_probs=186.7
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|++|+++ +...++++++|+++|++|++|.+.++++++++|+++|++||+++|+||+|++|+..+..+....++..
T Consensus 154 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 233 (375)
T 2eh6_A 154 FSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLK 233 (375)
T ss_dssp EEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred ceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCC
Confidence 45567788988 55555689999999999999988899999999999999999999999999988776654445556667
Q ss_pred CCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 83 PDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 83 ~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|++++||++++| +|+|++++++++++.+.+...+.+++.++++++++.++++.+. ++.++++++++++++.| +.+
T Consensus 234 ~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L-~~~ 309 (375)
T 2eh6_A 234 PDVIALAKGLGGG-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKL-KEL 309 (375)
T ss_dssp CSEEEECGGGGTT-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEEEcccccCC-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHH
Confidence 8999999999999 8999999999998888876567788889999988888888765 67788999999999999 666
Q ss_pred CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 163 SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+. ...++.+.+++++++.+ ..++.+.|.++||.+.+++.+.+|++++...+++++++++++|+++
T Consensus 310 ~~---~~~~~~g~~~~~~~~~~---~~~~~~~l~~~gi~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 310 GK---GKVKGRGLMLGLELERE---CKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp TS---SEEEEETTEEEEECSSC---CHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred hc---CCceEEEEEEEEEEcCc---HHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 52 34566788999988653 5678999999999999887899999999889999999999999875
No 39
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=2.5e-35 Score=253.78 Aligned_cols=227 Identities=23% Similarity=0.281 Sum_probs=193.3
Q ss_pred ccccCCCChhh-h-cCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC
Q psy6548 4 QFPVKSKQVPA-K-LKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~-~-~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
++.+||||+++ + .+.+ +++++|++||+++++|.++++++++++|+++|++||++||+||+|+ + ++|..++++.+
T Consensus 212 ~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~ 289 (465)
T 2yky_A 212 VVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEML 289 (465)
Confidence 56789999999 4 4443 6899999999999999899999999999999999999999999999 6 77777777888
Q ss_pred CCCCCEEEeeccccCCccchheeEeChhhhhccCC-----CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q psy6548 80 DVRPDIVILGKALSGGLYPISAVLADDEVMGTLVP-----GTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIF 154 (242)
Q Consensus 80 ~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l 154 (242)
++.||+++|||++++| +|+||+++++++++.+.+ ..+.+|+++|++++++++++++.++++++.++++++++++
T Consensus 290 gv~pDi~t~sK~lg~G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l 368 (465)
T 2yky_A 290 GISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRF 368 (465)
Confidence 9999999999999999 899999999999998887 2477899999999999999999988888899999999999
Q ss_pred HHHHHhhcCC--CCCCeEeeeceeEEEEecCCc------------hhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCH
Q psy6548 155 RSELRSRLSP--DIVPVVRGKGLLNAIVLDKSI------------LEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITE 220 (242)
Q Consensus 155 ~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~ 220 (242)
+++| +++.. .....+++.|.++++.+.... .....+++.|+++||++.|.+.+. +++.+|+
T Consensus 369 ~~~L-~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~----~s~~~t~ 443 (465)
T 2yky_A 369 RANL-NRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA----LSLEIAD 443 (465)
Confidence 9999 65532 344556788999999876510 125678999999999999875332 6688999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy6548 221 QELREGLDIIINTINTMA 238 (242)
Q Consensus 221 e~i~~~~~~l~~~l~~~~ 238 (242)
+|+++++++|+++++++.
T Consensus 444 edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 444 AGRDAFAEALADFIGEQR 461 (465)
Confidence 999999999999988764
No 40
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=6.7e-27 Score=200.25 Aligned_cols=226 Identities=13% Similarity=0.133 Sum_probs=174.5
Q ss_pred cccccCCCChhh--hcCCCC---CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccccc--CccCcccc
Q psy6548 3 LQFPVKSKQVPA--KLKSNP---NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRTGKLLA 75 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~~~---~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~--~~~g~~~~ 75 (242)
.++.+|++|+++ +.+.+. ++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+++ +..|.+ .
T Consensus 171 ~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~-~ 245 (427)
T 2w8t_A 171 EIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRG-V 245 (427)
T ss_dssp EEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCC-H
T ss_pred eeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCc-h
Confidence 356789999998 444332 7999999999999998776 999999999999999999999863 333433 2
Q ss_pred cccCCCCCC----EEEeeccccCCccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHH
Q psy6548 76 IHYEDVRPD----IVILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE-ENMIENAY 148 (242)
Q Consensus 76 ~~~~~~~~~----~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~ 148 (242)
...+++.++ +.++||+++ .+.||+++++++++.+.+.. ...+.+.+++.++++.++++.++. +++.++++
T Consensus 246 ~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 322 (427)
T 2w8t_A 246 YEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLW 322 (427)
T ss_dssp HHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 334555444 445899997 44589999999988887642 223556788888888888988765 56789999
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEee-eceeEEEEecCCchhHHHHHHHHHHCCceeccCC-------CCEEEEeccCcCCH
Q psy6548 149 KMGEIFRSELRSRLSPDIVPVVRG-KGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-------NNIIRLSPALNITE 220 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~lR~~~~~~~t~ 220 (242)
++++++++.| ++++-.+. .++ .+.++++.++.. .+..++.++|.++||.+.++. .+++|++++..+++
T Consensus 323 ~~~~~l~~~L-~~~g~~~~--~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~ 398 (427)
T 2w8t_A 323 SNARALHGGL-KAMGFRLG--TETCDSAIVAVMLEDQ-EQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTP 398 (427)
T ss_dssp HHHHHHHHHH-HHHTCEES--CSSCCSSEEEEEESSH-HHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHHHH-HHcCCccc--CCCCCCCEEEEEECCH-HHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCH
Confidence 9999999999 66542111 122 567888988764 567889999999999998652 36899999998999
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q psy6548 221 QELREGLDIIINTINTMAAK 240 (242)
Q Consensus 221 e~i~~~~~~l~~~l~~~~~~ 240 (242)
+++++++++|+++++++...
T Consensus 399 e~i~~~~~~l~~~l~~~~~~ 418 (427)
T 2w8t_A 399 AQIQTVLGMFQAAGRAVGVI 418 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999887543
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.95 E-value=1.2e-27 Score=204.41 Aligned_cols=219 Identities=16% Similarity=0.151 Sum_probs=162.8
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-cccc-----CCCC
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHY-----EDVR 82 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~-----~~~~ 82 (242)
|+++ +.+.++++++|++++++|++| ++++++++++|+++|++||+++|+||+|+++++.|... .+.. .+..
T Consensus 182 d~~~le~~i~~~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 260 (421)
T 3l8a_A 182 DFEQLEKDIIDNNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFT 260 (421)
T ss_dssp CHHHHHHHHHHTTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTE
T ss_pred CHHHHHHHhhccCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcE
Confidence 6776 444447899999999999999 77788889999999999999999999999987766421 1111 1222
Q ss_pred CCEEEeecccc-CCccchheeEeC-hhhhhccCCCCC-CCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Q psy6548 83 PDIVILGKALS-GGLYPISAVLAD-DEVMGTLVPGTH-GSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 83 ~~~~~~sK~~~-~g~~~~g~~~~~-~~~~~~l~~~~~-~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~ 157 (242)
+++.++||+++ +| +|+|+++++ +++++.+.+... ..+++.|+++++++.++++..+. ++..++++++++++++.
T Consensus 261 i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~ 339 (421)
T 3l8a_A 261 IILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKE 339 (421)
T ss_dssp EEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 34555889998 89 899999988 888887766432 33457889999998888874332 45667788888889999
Q ss_pred HHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHH-CCceeccC------CCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 158 LRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPI------SNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
| ++++ .+....+..+++.|++++..+.+..++.+.|++ +||.+.++ +.+++|++++ ++++++++++++|
T Consensus 340 L-~~~~-~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l 415 (421)
T 3l8a_A 340 L-EAKT-KIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRI 415 (421)
T ss_dssp H-HHHC-SCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHH
T ss_pred H-HhCC-CceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHH
Confidence 8 5553 222222334556678887622356788999975 59999873 4689999966 6999999999999
Q ss_pred HHHHH
Q psy6548 231 INTIN 235 (242)
Q Consensus 231 ~~~l~ 235 (242)
+++++
T Consensus 416 ~~~l~ 420 (421)
T 3l8a_A 416 ISVFG 420 (421)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 98764
No 42
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=2.9e-26 Score=192.71 Aligned_cols=222 Identities=17% Similarity=0.180 Sum_probs=166.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG 89 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s 89 (242)
|+++ +...++++++|++++++|++|. +.+.+++++|+++|++||+++|+||+|++++..+.....+.++....+.++|
T Consensus 143 d~~~l~~~l~~~~~~v~~~~~~nptG~-~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~s 221 (375)
T 3op7_A 143 DLEKLRQLIRPTTKMICINNANNPTGA-VMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLS 221 (375)
T ss_dssp CHHHHHHHCCTTCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESS
T ss_pred CHHHHHHhhccCCeEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeECh
Confidence 6666 4444568999999999999995 5577889999999999999999999998875543222233344445566699
Q ss_pred cccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhhcCCCC
Q psy6548 90 KALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSRLSPDI 166 (242)
Q Consensus 90 K~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~ 166 (242)
|+++ +| +|+||+++++++++.+......++++.++++++++.++++..+. +...+.++++++.+++.| +..+. +
T Consensus 222 K~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~-~ 298 (375)
T 3op7_A 222 KTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWI-EEEPL-V 298 (375)
T ss_dssp SSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-HHCTT-E
T ss_pred hhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-hhCCC-c
Confidence 9998 88 99999999999999998877777788889988888877775432 334566677888888888 55432 1
Q ss_pred CCeEeeeceeEEEEecCCchhHHHHHHHH-HHCCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 167 VPVVRGKGLLNAIVLDKSILEVYDVCIKM-KDAGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
....+..+.+.++.++.. .+..++++.| .++||.+.|+. ++++|+++ ..+.+++++++++|+++++++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 299 SYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGF--ACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp EECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECC--CSCHHHHHHHHHHHHHHHGGGC-
T ss_pred eEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHHhh
Confidence 111233456677777655 5677888888 47899998763 68999994 45669999999999999987643
No 43
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=3.1e-26 Score=194.92 Aligned_cols=219 Identities=17% Similarity=0.217 Sum_probs=170.4
Q ss_pred ccccCCCChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc--cCccCcccccccC
Q psy6548 4 QFPVKSKQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--LGRTGKLLAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~--~~~~g~~~~~~~~ 79 (242)
++.++++|+++ +.+.++++++|++++++|++|.+.+ +++|+++|++||++||+||+|++ +++.|.++. ..+
T Consensus 167 ~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~-~~~ 241 (409)
T 3kki_A 167 AHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGAGLL-AEL 241 (409)
T ss_dssp EEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH-HHH
T ss_pred EEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCcch-hhc
Confidence 45678889988 4455556799999999999997776 99999999999999999999987 666665433 333
Q ss_pred CC--CCCE--EEeeccccCCccchheeEeChhhhhccCCCCCC--CCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Q psy6548 80 DV--RPDI--VILGKALSGGLYPISAVLADDEVMGTLVPGTHG--STYGGNPLACKLAMTALDVILE-ENMIENAYKMGE 152 (242)
Q Consensus 80 ~~--~~~~--~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~ 152 (242)
++ .+|+ .++||+++++ .|++++++++++.+...... .+.+.++.+++++.++++.++. +++.++++++++
T Consensus 242 ~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~ 318 (409)
T 3kki_A 242 GLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMAR 318 (409)
T ss_dssp TCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 44 4566 4489999955 58899998888776643222 1224577888888888887765 467788999999
Q ss_pred HHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc-------CCCCEEEEeccCcCCHHHHHH
Q psy6548 153 IFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP-------ISNNIIRLSPALNITEQELRE 225 (242)
Q Consensus 153 ~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-------~~~~~lR~~~~~~~t~e~i~~ 225 (242)
++++.| ++++..+ .+.+.++++.++.. .+..++.+.|.++||.+.+ .+.+++|++++..++++++++
T Consensus 319 ~l~~~L-~~~g~~~----~~~~~~~~~~~~~~-~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~ 392 (409)
T 3kki_A 319 KLRIGL-SQLGLTI----RSESQIIGLETGDE-RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAK 392 (409)
T ss_dssp HHHHHH-HTTTCCC----CCSSSEEEEEEESH-HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHH
T ss_pred HHHHHH-HHcCCcc----CCCCCEEEEEeCCH-HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHH
Confidence 999999 6664221 24678888888775 5677899999999999953 346799999999999999999
Q ss_pred HHHHHHHHHHH
Q psy6548 226 GLDIIINTINT 236 (242)
Q Consensus 226 ~~~~l~~~l~~ 236 (242)
++++|+++++.
T Consensus 393 ~~~~l~~~l~~ 403 (409)
T 3kki_A 393 IIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 44
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.94 E-value=7.2e-26 Score=195.03 Aligned_cols=215 Identities=15% Similarity=0.178 Sum_probs=159.6
Q ss_pred CCEEEEEE-cccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc----ccccCCCCCCEEEeeccccC
Q psy6548 20 PNICAFMV-EPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL----AIHYEDVRPDIVILGKALSG 94 (242)
Q Consensus 20 ~~~~~i~~-e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~----~~~~~~~~~~~~~~sK~~~~ 94 (242)
+++++|++ ..++|++|.+ .+.+++++|+++|++||++||+||+|.++...|... .++..+....+.+|||++++
T Consensus 215 ~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~ 293 (448)
T 3aow_A 215 KKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAP 293 (448)
T ss_dssp CCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCG
T ss_pred CCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccc
Confidence 37888854 5578888854 677899999999999999999999998875544321 11212223345559999998
Q ss_pred CccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH--Hh--ccHHHHHHHHHHHHHHHHHhhcCCCCCCeE
Q psy6548 95 GLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI--LE--ENMIENAYKMGEIFRSELRSRLSPDIVPVV 170 (242)
Q Consensus 95 g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~--~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~ 170 (242)
| +|+||+++++++++.+.......+++.+++++.++.++++.. .. +...+.++++++.+.+.|++.++..+....
T Consensus 294 G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~ 372 (448)
T 3aow_A 294 G-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTK 372 (448)
T ss_dssp G-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECC
T ss_pred c-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeC
Confidence 9 999999999999888876444556677889888888777642 11 334566667888888888333442222223
Q ss_pred eeeceeEEEEecCCchhHHHHHHHHHHCCceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 171 RGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------SNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+..|+++|+.++.. .+..++.+.|.++||.+.|+ +.+++|++++.. +++++++++++|++++++..
T Consensus 373 p~~g~~~~v~~~~~-~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~-~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 373 PEGGMFIWVTLPDG-IDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYV-DEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp CSBSSEEEEECSTT-CCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSS-CTHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEEcCCC-CCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 44578999999764 56788999999999999874 357899997764 89999999999999998754
No 45
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=1.1e-25 Score=190.35 Aligned_cols=223 Identities=17% Similarity=0.271 Sum_probs=172.4
Q ss_pred cccccCCCChhh--hcCCC-----CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccc-ccc-CccCcc
Q psy6548 3 LQFPVKSKQVPA--KLKSN-----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGL-GRTGKL 73 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~~-----~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~-~~~g~~ 73 (242)
.++.+|++|+++ +.+.+ .++++|++++++|++|.+.+ +++|+++|++||+++|+||+| .++ +..+.+
T Consensus 150 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~ 225 (399)
T 3tqx_A 150 QRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGRG 225 (399)
T ss_dssp EEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCC
T ss_pred ceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 356778888887 33332 28999999999999998776 999999999999999999999 453 333332
Q ss_pred cccccCCC--CCCEE--EeeccccCCccchheeEeChhhhhccCCCCC--CCCCCCCHHHHHHHHHHHHHH-H-hccHHH
Q psy6548 74 LAIHYEDV--RPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGTH--GSTYGGNPLACKLAMTALDVI-L-EENMIE 145 (242)
Q Consensus 74 ~~~~~~~~--~~~~~--~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~a~a~l~~~-~-~~~~~~ 145 (242)
....+++ .+|++ ++||+++ | .+.||+++++++++.+..... ..+.+.++++++++.++++.. + .++..+
T Consensus 226 -~~~~~~~~~~~di~~~s~sK~~~-g-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 302 (399)
T 3tqx_A 226 -TPEYCGVADRVDILTGTLGKALG-G-ASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRK 302 (399)
T ss_dssp -HHHHHTCTTCCSEEEEESSSSSC-S-SCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred -hHHhhCCCCCCcEEEecchHhcc-c-CceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHH
Confidence 2334444 66777 5889999 5 677999999998888765322 223367788888888888877 3 256788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-------CCCEEEEeccCcC
Q psy6548 146 NAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-------SNNIIRLSPALNI 218 (242)
Q Consensus 146 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------~~~~lR~~~~~~~ 218 (242)
+++++++++++.| +.++-. ..++.+.++++.++.. .+..++.+.|.++||.+.+. +.+++|++++..+
T Consensus 303 ~~~~~~~~l~~~L-~~~g~~---~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~ 377 (399)
T 3tqx_A 303 QLQENSRYFRAGM-EKLGFQ---LVPGNHPIIPVMLGDA-QLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVH 377 (399)
T ss_dssp HHHHHHHHHHHHH-HHHTCC---BCCCSSSEEEEEEECH-HHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHH-HHcCCC---cCCCCCCEEEEEeCCH-HHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCC
Confidence 8999999999999 666421 1245677888888775 57889999999999999843 3468999998889
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy6548 219 TEQELREGLDIIINTINTM 237 (242)
Q Consensus 219 t~e~i~~~~~~l~~~l~~~ 237 (242)
+++++++++++|+++++++
T Consensus 378 ~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 378 TQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998875
No 46
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=4.7e-25 Score=187.31 Aligned_cols=213 Identities=16% Similarity=0.179 Sum_probs=160.7
Q ss_pred CCEEEEE-EcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCCC---CCEEEeeccccC
Q psy6548 20 PNICAFM-VEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDVR---PDIVILGKALSG 94 (242)
Q Consensus 20 ~~~~~i~-~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~---~~~~~~sK~~~~ 94 (242)
+++++|+ +++++|++|.+ .+.+++++|+++|++||+++|+||+|+++...+.. .....++.. ..+.++||++++
T Consensus 173 ~~~~~v~~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 251 (407)
T 2zc0_A 173 QKVKLIYTIPTGQNPMGVT-MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGT 251 (407)
T ss_dssp CCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCT
T ss_pred CCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCC
Confidence 3788874 66788999964 56789999999999999999999999877554432 122222211 234458999998
Q ss_pred CccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHhh-cCCCCCC
Q psy6548 95 GLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI--L---EENMIENAYKMGEIFRSELRSR-LSPDIVP 168 (242)
Q Consensus 95 g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~--~---~~~~~~~~~~~~~~l~~~l~~~-l~~~~~~ 168 (242)
| +|+||+++++++++.+.......+++.+++++.++.++++.. + -+...+.++++++++++.| +. ++. +..
T Consensus 252 G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~ 328 (407)
T 2zc0_A 252 G-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKAL-ENHLPN-AEF 328 (407)
T ss_dssp T-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHH-HHHCTT-SCB
T ss_pred C-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH-HHhCCC-CEE
Confidence 8 899999999998888776545566777888888888887753 2 1456777888899999999 54 332 222
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI--------SNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
..+..++++|+.++.. .+..++.+.|.++ ||.+.++ +.+++|++++.. +++++++++++|+++++++.
T Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 329 TKPIAGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp CCCSBSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred ecCCCcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 2244578899998754 4678899999998 9999875 357899998766 89999999999999998764
No 47
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.93 E-value=2.5e-25 Score=187.74 Aligned_cols=222 Identities=13% Similarity=0.155 Sum_probs=164.8
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCC-CCC-
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDV-RPD- 84 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~-~~~- 84 (242)
.|+++ +.+.++++++|++++++|++|. +++.+.+++|+++|++||+++|+||+|+++.+.|.. ......+. .+|
T Consensus 147 ~d~~~l~~~l~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~ 225 (391)
T 3dzz_A 147 VNWADLEEKLATPSVRMMVFCNPHNPIGY-AWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNW 225 (391)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGG
T ss_pred ecHHHHHHHHhccCceEEEEECCCCCCCc-ccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCc
Confidence 46666 4455578999999999999995 456677999999999999999999999887666532 22222221 255
Q ss_pred -EE--Eeecccc-CCccchheeEeC-hhhhhccCCCCC-CCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHH
Q psy6548 85 -IV--ILGKALS-GGLYPISAVLAD-DEVMGTLVPGTH-GSTYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRS 156 (242)
Q Consensus 85 -~~--~~sK~~~-~g~~~~g~~~~~-~~~~~~l~~~~~-~~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~ 156 (242)
++ ++||+++ +| +|+||++++ +++++.+..... ..+++.+++++.++.++++... .++..++++++++++++
T Consensus 226 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 304 (391)
T 3dzz_A 226 VVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYARE 304 (391)
T ss_dssp EEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 33 3889998 88 899999987 888887765322 3445778888888888877532 24567778888899999
Q ss_pred HHHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHH
Q psy6548 157 ELRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 157 ~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
.| +. ++. +....+..+++.|+.++..+.+..++.++|. ++||.+.++ +++++|++++ +++++++++++
T Consensus 305 ~l-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~ 380 (391)
T 3dzz_A 305 FL-AKEVPE-VKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQ 380 (391)
T ss_dssp HH-HHHCTT-SEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHH
T ss_pred HH-HhhCCC-cEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHH
Confidence 99 55 542 2222234566778888753246888999996 899999875 2489999966 69999999999
Q ss_pred HHHHHHHHH
Q psy6548 229 IIINTINTM 237 (242)
Q Consensus 229 ~l~~~l~~~ 237 (242)
+|+++++++
T Consensus 381 ~l~~~l~~~ 389 (391)
T 3dzz_A 381 RLKQGVLNL 389 (391)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998765
No 48
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=3.9e-25 Score=186.71 Aligned_cols=220 Identities=16% Similarity=0.133 Sum_probs=162.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc-ccccccC-C-CCCCEE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-LLAIHYE-D-VRPDIV 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~-~-~~~~~~ 86 (242)
|+++ +...+.++++|++++++|++|.+ .+.+.+++|+++|++||+++|+||+|+++...+. ......+ + ...+++
T Consensus 149 d~~~l~~~l~~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T 1gd9_A 149 NVDELKKYVTDKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTIT 227 (389)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEE
T ss_pred CHHHHHHhcCcCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEE
Confidence 5666 33334478899999999999955 5678999999999999999999999988755443 2222222 2 123433
Q ss_pred --Eeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHH
Q psy6548 87 --ILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 87 --~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~----~~~~~~~~~~~~~l~~~l~ 159 (242)
++||+++ +| +|+||+++++++++.+.+.....+++.+++++.++.++++.... ++..++++++++.+.+.|
T Consensus 228 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L- 305 (389)
T 1gd9_A 228 VNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL- 305 (389)
T ss_dssp EEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH-
Confidence 4889998 88 89999999999988887655556678888888888888774332 345677788888888888
Q ss_pred hhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 160 SRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
+.++ +....+..++++|+.++..+.+..++.+.|. ++||.+.++ +++++|++++ .+++++++++++|++
T Consensus 306 ~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~ 381 (389)
T 1gd9_A 306 NEMG--LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA--TAYEKLEEAMDRMER 381 (389)
T ss_dssp HHTT--CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHH
T ss_pred HHcC--CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 6553 2222234567788887641146788999998 899999875 2678999966 489999999999999
Q ss_pred HHHHH
Q psy6548 233 TINTM 237 (242)
Q Consensus 233 ~l~~~ 237 (242)
++++.
T Consensus 382 ~~~~~ 386 (389)
T 1gd9_A 382 VLKER 386 (389)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 98764
No 49
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.93 E-value=2.2e-25 Score=190.76 Aligned_cols=219 Identities=17% Similarity=0.165 Sum_probs=162.1
Q ss_pred CChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-cccc----CCCCC
Q psy6548 10 KQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHY----EDVRP 83 (242)
Q Consensus 10 ~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~----~~~~~ 83 (242)
.|+++ +...++++++|++++++|++|.+ ++++++++|+++|++||+++|+||+|+++.+.|... .+.. .+..+
T Consensus 170 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 248 (429)
T 1yiz_A 170 LDNNELEALFNEKTKMIIINTPHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI 248 (429)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEE
T ss_pred cCHHHHHHHhccCceEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceE
Confidence 35666 43335689999999999999955 567899999999999999999999999876554321 1111 22223
Q ss_pred CEEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH-----HHh----ccHHHHHHHHHHH
Q psy6548 84 DIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV-----ILE----ENMIENAYKMGEI 153 (242)
Q Consensus 84 ~~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~-----~~~----~~~~~~~~~~~~~ 153 (242)
.+.++||+++ +| +|+||+++++++++.+.......+++.+++++.++.++++. ... ++..++++++++.
T Consensus 249 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (429)
T 1yiz_A 249 TIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY 327 (429)
T ss_dssp EEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred EEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence 3455889999 88 89999999999988877644556778899999888888886 311 2345667778888
Q ss_pred HHHHHHhhcCCCCCCeEeeeceeEEEEecCCc-----------hhHHHHHHHHH-HCCceeccCC-----------CCEE
Q psy6548 154 FRSELRSRLSPDIVPVVRGKGLLNAIVLDKSI-----------LEVYDVCIKMK-DAGLVTKPIS-----------NNII 210 (242)
Q Consensus 154 l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~-~~gi~~~~~~-----------~~~l 210 (242)
+++.| ++++ +....+..|+++|++++... .+..++.++|. ++||.+.++. ++++
T Consensus 328 l~~~L-~~~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~i 404 (429)
T 1yiz_A 328 MASFL-AEVG--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFV 404 (429)
T ss_dssp HHHHH-HHHT--CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEE
T ss_pred HHHHH-HhCC--CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeE
Confidence 88888 5553 22223345788999987530 25678888887 7899998751 5799
Q ss_pred EEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 211 RLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 211 R~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
|++++ .+++++++++++|+++++
T Consensus 405 Ris~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 405 RYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp EEECC--SCHHHHHHHHHHHHHHSC
T ss_pred EEEec--CCHHHHHHHHHHHHHhcc
Confidence 99976 599999999999988764
No 50
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.93 E-value=5e-25 Score=186.28 Aligned_cols=214 Identities=14% Similarity=0.153 Sum_probs=157.8
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-CCCCCEEEeecccc-CCccc
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE-DVRPDIVILGKALS-GGLYP 98 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~sK~~~-~g~~~ 98 (242)
++++|++++++|++|.+ .+.+.+++|+++|++||+++|+||+|+++...+.......+ +....+.++||+++ +| +|
T Consensus 161 ~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r 238 (391)
T 3h14_A 161 DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTG-WR 238 (391)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTT-SC
T ss_pred CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCcc-ce
Confidence 78888999999999954 46677999999999999999999999987655542222222 11112234889998 89 99
Q ss_pred hheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeE
Q psy6548 99 ISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLN 177 (242)
Q Consensus 99 ~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~ 177 (242)
+||+++++++++.+.......+++.+++++.++.++++..+. ++..++++++++.+++.| +.++.... ..+..++++
T Consensus 239 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~-~~~~~~~~~ 316 (391)
T 3h14_A 239 VGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERL-PKAGFTRI-APPDGAFYV 316 (391)
T ss_dssp CEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-HHHTCCCB-CCCCBTTEE
T ss_pred eEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCcc-cCCCeeEEE
Confidence 999999999888887655566778888888888777762111 345677788888888888 66642211 123346788
Q ss_pred EEEecCCchhHHHHHHHHHHC-CceeccC-------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 178 AIVLDKSILEVYDVCIKMKDA-GLVTKPI-------SNNIIRLSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 178 ~~~~~~~~~~~~~~~~~l~~~-gi~~~~~-------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
|+.++....+..++.++|+++ ||.+.++ +.+++|++++. +++++++++++|++++++....
T Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 317 YADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp EEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC---
T ss_pred EEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhccc
Confidence 888875325688899998876 9999864 25799999654 8899999999999999876543
No 51
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=8.7e-26 Score=191.34 Aligned_cols=223 Identities=15% Similarity=0.162 Sum_probs=161.9
Q ss_pred Chhh--hcCCCCCEEEE-EEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCCC---C
Q psy6548 11 QVPA--KLKSNPNICAF-MVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDVR---P 83 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i-~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~---~ 83 (242)
|+++ +.+.++++++| +++.++|++|.+ .+.+++++|+++|++||+++|+||+|+++...|.. .....++.. +
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGL-TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCB-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence 5665 33444467777 467788999954 56789999999999999999999999887654432 111222211 2
Q ss_pred C---EEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHH
Q psy6548 84 D---IVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---EENMIENAYKMGEIFRSE 157 (242)
Q Consensus 84 ~---~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~---~~~~~~~~~~~~~~l~~~ 157 (242)
+ +.++||++++| +|+||+++++++++.+.......+++.+++++.++.++++... -++..++++++++.+.+.
T Consensus 229 ~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 229 GVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp CEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccccccccc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2 33488999988 8999999999988887754444556678888888777776321 133456677778888888
Q ss_pred HHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC--------CCCEEEEeccCcCCHHHHHHHHH
Q psy6548 158 LRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------SNNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 158 l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
| ++ ++.++....+..|+++|++++.. .+..++.++|.++||.+.++ +++++|++++.. ++++++++++
T Consensus 308 L-~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~ 384 (397)
T 2zyj_A 308 L-DREVPKEVRYTRPKGGMFVWMELPKG-LSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVR 384 (397)
T ss_dssp H-HHHSCTTSEECCCSBSSEEEEECSTT-CCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHH
T ss_pred H-HHHCCCCeEEccCCccEEEEEEcCCC-CCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHH
Confidence 8 44 33222212234578899998764 46788999999999999864 357999998765 8999999999
Q ss_pred HHHHHHHHHh
Q psy6548 229 IIINTINTMA 238 (242)
Q Consensus 229 ~l~~~l~~~~ 238 (242)
+|+++++++.
T Consensus 385 ~l~~~l~~~~ 394 (397)
T 2zyj_A 385 RLGRALKGLL 394 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 52
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9e-25 Score=188.11 Aligned_cols=216 Identities=16% Similarity=0.209 Sum_probs=161.3
Q ss_pred CChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccc-----cCCCCC
Q psy6548 10 KQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH-----YEDVRP 83 (242)
Q Consensus 10 ~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~-----~~~~~~ 83 (242)
.|+++ +...++++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|.++...+....+. .++...
T Consensus 189 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i 267 (447)
T 3b46_A 189 IDFEQFEKAITSKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTL 267 (447)
T ss_dssp ECHHHHHTTCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEE
T ss_pred cCHHHHHHhhccCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEE
Confidence 35666 44445689999999999999965 567899999999999999999999999875554211111 123333
Q ss_pred CEEEeecccc-CCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHH
Q psy6548 84 DIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 84 ~~~~~sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~----~~~~~~~~~~~~~l~~~ 157 (242)
.+.++||+++ +| +|+||+++ ++++++.+.......+++.+++++.++.++++.... +++.+.++++++.+.+.
T Consensus 268 ~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (447)
T 3b46_A 268 TVGSAGKSFAATG-WRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI 346 (447)
T ss_dssp EEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCchhcCCcc-hhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 4555899999 89 99999999 999888876544445677888888888888886532 23567788888888888
Q ss_pred HHhhcCCCCCCeEeeeceeEEEEecCC--------------chhHHHHHHHHH-HCCceeccCC-----------CCEEE
Q psy6548 158 LRSRLSPDIVPVVRGKGLLNAIVLDKS--------------ILEVYDVCIKMK-DAGLVTKPIS-----------NNIIR 211 (242)
Q Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~-~~gi~~~~~~-----------~~~lR 211 (242)
| ++++ +....+..|+++|++++.. ..+..+++++|. ++||.+.|+. ++++|
T Consensus 347 L-~~~g--~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iR 423 (447)
T 3b46_A 347 F-DELG--LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLR 423 (447)
T ss_dssp H-HHHT--CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEE
T ss_pred H-HHCC--CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEE
Confidence 8 6554 2222345678899988642 135678898887 5899998752 68999
Q ss_pred EeccCcCCHHHHHHHHHHHHH
Q psy6548 212 LSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 212 ~~~~~~~t~e~i~~~~~~l~~ 232 (242)
++++ .+++++++++++|++
T Consensus 424 ls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 424 FAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp EECC--SCHHHHHHHHHHGGG
T ss_pred EEEe--CCHHHHHHHHHHHHH
Confidence 9965 589999999999876
No 53
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1.7e-25 Score=191.42 Aligned_cols=215 Identities=17% Similarity=0.231 Sum_probs=159.9
Q ss_pred CEEEEE-EcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCCCCC---EEEeeccccCC
Q psy6548 21 NICAFM-VEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDVRPD---IVILGKALSGG 95 (242)
Q Consensus 21 ~~~~i~-~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~---~~~~sK~~~~g 95 (242)
++++|+ +..++|++|.+ .+.+++++|+++|++||+++|+||+|+++...|.. ..+..++..++ +.++||++++|
T Consensus 187 ~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G 265 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPG 265 (425)
T ss_dssp GEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGG
T ss_pred CceEEEECCCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccc
Confidence 788874 67788999854 56789999999999999999999999887554432 12211111122 33489999988
Q ss_pred ccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH--Hh--ccHHHHHHHHHHHHHHHHHhhc-CC--CCCC
Q psy6548 96 LYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI--LE--ENMIENAYKMGEIFRSELRSRL-SP--DIVP 168 (242)
Q Consensus 96 ~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~--~~--~~~~~~~~~~~~~l~~~l~~~l-~~--~~~~ 168 (242)
+|+||+++++++++.+.......+++.+++++.++.++++.. .. +...+.++++++.+++.| +.. +. ++..
T Consensus 266 -~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~g~~~ 343 (425)
T 1vp4_A 266 -LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNAL-EEYFSDIPGVKW 343 (425)
T ss_dssp -GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHH-HHHSTTSTTCEE
T ss_pred -cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCCceEE
Confidence 899999999998888775444455677889998888888753 11 345667778888899999 543 32 2222
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------SNNIIRLSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
..+..|+++|+.++.. .+..++.+.|.++||.+.++ +.+++|++++.. +++++++++++|+++++++.+.
T Consensus 344 ~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 344 VKSEGGLFIWLTLPEG-FDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp CCCSBSSEEEEECCTT-CCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccEEEEEEcCCC-CCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence 2245678999998753 45677899999999999864 357899998764 8999999999999999887654
No 54
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.93 E-value=8.2e-26 Score=190.12 Aligned_cols=207 Identities=14% Similarity=0.162 Sum_probs=152.1
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCC---CCCCEEEeecccc-
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYED---VRPDIVILGKALS- 93 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~---~~~~~~~~sK~~~- 93 (242)
+++++++++++++|++|.+ .+.+++++|+++|++||+++|+||+|+++...+... .....+ ....+.++||+++
T Consensus 156 ~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (376)
T 2dou_A 156 WREAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNL 234 (376)
T ss_dssp HHHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTC
T ss_pred ccCceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCC
Confidence 3578999998889999955 567899999999999999999999998875544321 122222 1222345889998
Q ss_pred CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEe
Q psy6548 94 GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSRLSPDIVPVVR 171 (242)
Q Consensus 94 ~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 171 (242)
+| +|+||+++++++++.+.......+++.+++++.++.++++..+. ++..+.++++++.+.+.| +++ +....+
T Consensus 235 ~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~~---~~~~~~ 309 (376)
T 2dou_A 235 AG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEAL-KGV---LSLLPP 309 (376)
T ss_dssp GG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH-TTT---SEECCC
T ss_pred hh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH-HHh---cCccCC
Confidence 88 89999999999988877644445667788888888777764211 334566677777777777 443 111123
Q ss_pred eeceeEEEEecCCchhHHHHHHHHHHCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 172 GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
..++++|+.++.. .+..++.++|.++||.+.++ +.+++|++++ .+++++++++++|++++
T Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 310 RATMYLWGRLPEG-VDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALV--RPLEELLEAAKRIREAL 375 (376)
T ss_dssp CBSSEEEEECCTT-CCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHTC
T ss_pred CeeEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 3567888998754 46788999999999999875 2579999965 48999999999998764
No 55
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.93 E-value=6.8e-25 Score=187.92 Aligned_cols=218 Identities=12% Similarity=0.092 Sum_probs=163.2
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-c--------cccc-
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-L--------AIHY- 78 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~--------~~~~- 78 (242)
|+++ +.+.++++++|+++.++|++|. +.+.+.+++|+++|++||+++|+||+|+++...+.. . .+..
T Consensus 170 d~~~l~~~l~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T 3g0t_A 170 LREKLESYLQTGQFCSIIYSNPNNPTWQ-CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANY 248 (437)
T ss_dssp HHHHHHHHHTTTCCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGT
T ss_pred CHHHHHHHHhcCCceEEEEeCCCCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCC
Confidence 4555 4454678888888777999995 456677999999999999999999999875433221 1 1111
Q ss_pred CCCCCCEEEeecccc-CCccchheeEeChhhhh-c-----------------cCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy6548 79 EDVRPDIVILGKALS-GGLYPISAVLADDEVMG-T-----------------LVPGTHGSTYGGNPLACKLAMTALDVIL 139 (242)
Q Consensus 79 ~~~~~~~~~~sK~~~-~g~~~~g~~~~~~~~~~-~-----------------l~~~~~~~~~~~~~~~~~~a~a~l~~~~ 139 (242)
.+....+.++||.++ +| +|+||+++++++++ . +.......+++.+++++.++.++++...
T Consensus 249 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 327 (437)
T 3g0t_A 249 TDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACN 327 (437)
T ss_dssp CSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcH
Confidence 111122334889999 89 99999999999988 7 7664445567888999998888888765
Q ss_pred -----hccHHHHHHHHHHHHHHHHHhhcCCCCCCe------Ee-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-
Q psy6548 140 -----EENMIENAYKMGEIFRSELRSRLSPDIVPV------VR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS- 206 (242)
Q Consensus 140 -----~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~- 206 (242)
-++..++++++++.+++.| +.++ +... .+ ..++++|+.++. .+..++.++|.++||.+.++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~L-~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~~~~ 402 (437)
T 3g0t_A 328 DGEYNFRDSVIEYGRKARIMKKMF-LDNG--FNIVYDKDGNEPLADGFYFTVGYKG--MDSSKLIEKFVRYGMCAITLKT 402 (437)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHH-HTTT--EEESSCEETTEECCSSSEEEEEETT--CCHHHHHHHHHHTTEECEESTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHcC--CEEeccccCCCCCceeEEEEEecCC--CCHHHHHHHHHHcCeEEeeccc
Confidence 2356778888889999999 6653 1111 23 567889999883 578899999999999998763
Q ss_pred -----CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 -----NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 -----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
++.+|++++.. +++++++++++|++++++
T Consensus 403 ~~~~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 403 TGSKRNEAMRICTSLL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp TTCCCTTCEEEECSSS-CGGGHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 27899998844 999999999999987753
No 56
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=1.1e-24 Score=184.71 Aligned_cols=223 Identities=16% Similarity=0.244 Sum_probs=171.2
Q ss_pred ccccCCCChhh--hcCCC--C---CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccC-ccCccc
Q psy6548 4 QFPVKSKQVPA--KLKSN--P---NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLG-RTGKLL 74 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~--~---~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~-~~g~~~ 74 (242)
++.+|++|+++ +.+.+ + ++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ |+. +.+..+
T Consensus 153 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~ 228 (401)
T 1fc4_A 153 RYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS 228 (401)
T ss_dssp EEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH
T ss_pred eEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCCcc
Confidence 45677888887 33332 1 7899999999999997776 9999999999999999999994 763 344432
Q ss_pred ccccCCC--CCCEE--EeeccccCCccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHH
Q psy6548 75 AIHYEDV--RPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE-ENMIENA 147 (242)
Q Consensus 75 ~~~~~~~--~~~~~--~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~ 147 (242)
....++ ..|++ ++||+++++ . .||+++++++++.+.... ...+++.++++++++.++++.+.. +++.+++
T Consensus 229 -~~~~~~~~~~di~~~s~sK~~~~~-~-gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 305 (401)
T 1fc4_A 229 -HEYCDVMGRVDIITGTLGKALGGA-S-GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRL 305 (401)
T ss_dssp -HHHTTCTTCCSEEEEESSSTTCSS-S-CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred -HHHcCCCcCCcEEEecchhhccCC-C-CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 122333 24666 488999766 4 499999999888776532 223557788999999989887754 5678889
Q ss_pred HHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-------CCEEEEeccCcCCH
Q psy6548 148 YKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-------NNIIRLSPALNITE 220 (242)
Q Consensus 148 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~lR~~~~~~~t~ 220 (242)
+++++++++.| +.++-.. .++.+.++++.++.. .+..++.+.|.++||.+.++. .+++|++++..+++
T Consensus 306 ~~~~~~l~~~L-~~~g~~~---~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~ 380 (401)
T 1fc4_A 306 WANARQFREQM-SAAGFTL---AGADHAIIPVMLGDA-VVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTP 380 (401)
T ss_dssp HHHHHHHHHHH-HHTTCCB---CCSSSSEEEEEEECH-HHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHHHHH-HHcCCcc---cCCCCCEEEEEcCCh-HHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCH
Confidence 99999999999 6654211 145778889988764 567889999999999998652 35899999888999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy6548 221 QELREGLDIIINTINTMA 238 (242)
Q Consensus 221 e~i~~~~~~l~~~l~~~~ 238 (242)
+++++++++|+++++++.
T Consensus 381 ~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 381 EQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999988764
No 57
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.92 E-value=5.8e-25 Score=189.22 Aligned_cols=227 Identities=10% Similarity=0.030 Sum_probs=162.2
Q ss_pred ccccCCCChhh--hcCC-CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccC
Q psy6548 4 QFPVKSKQVPA--KLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYE 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~-~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~ 79 (242)
+..+|+++.+. ..+. .+++++|++++++|++|. +++.+.+++|+++|++||+++|+||+|++|...+.. ..+..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~-~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 267 (449)
T 3qgu_A 189 IEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGA-AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEI 267 (449)
T ss_dssp EEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGS
T ss_pred eEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhc
Confidence 56677765433 1222 257889998899999995 557788999999999999999999999987655431 122222
Q ss_pred C----CCCCEEEeecccc-CCccchheeEeChhhhhc--------cCCCCCCCCCCCCHHHHHHHHHHHHHHH---hccH
Q psy6548 80 D----VRPDIVILGKALS-GGLYPISAVLADDEVMGT--------LVPGTHGSTYGGNPLACKLAMTALDVIL---EENM 143 (242)
Q Consensus 80 ~----~~~~~~~~sK~~~-~g~~~~g~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~a~a~l~~~~---~~~~ 143 (242)
+ ....+.++||+++ +| +|+||+++++++++. +.......+++.+++++.++.++++... .++.
T Consensus 268 ~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 346 (449)
T 3qgu_A 268 PGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAM 346 (449)
T ss_dssp TTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHH
T ss_pred cCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHH
Confidence 2 1223445999999 89 999999999887652 2211123344678888888888776421 2456
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC------CCCEEEEeccC
Q psy6548 144 IENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI------SNNIIRLSPAL 216 (242)
Q Consensus 144 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~------~~~~lR~~~~~ 216 (242)
.++++++++++++.| ++++ +....+..++++|+.++ . .+..++++.|+++ ||.+.|+ +++++|++ +
T Consensus 347 ~~~~~~~~~~l~~~L-~~~g--~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~ 419 (449)
T 3qgu_A 347 IKFYKENAQILKTTF-TEMG--FSVYGGDDAPYIWVGFP-G-KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--A 419 (449)
T ss_dssp HHHHHHHHHHHHHHH-HHTT--CCEEESSSSSEEEEECT-T-SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--C
T ss_pred HHHHHHHHHHHHHHH-HHCC--CeeeCCCCeeEEEEECC-C-CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--e
Confidence 788888999999999 6653 22223345789999988 3 5678899888876 9999864 36899999 5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 217 NITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 217 ~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
..+++++++++++|++++++-..
T Consensus 420 ~~~~e~i~~~l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 420 FGSRENILEAVRRFKEAYGKRNA 442 (449)
T ss_dssp CSCHHHHHHHHHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHHHHHhcCc
Confidence 56999999999999998876433
No 58
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=1.6e-24 Score=184.44 Aligned_cols=217 Identities=12% Similarity=0.130 Sum_probs=160.7
Q ss_pred hhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEE--E
Q psy6548 12 VPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIV--I 87 (242)
Q Consensus 12 ~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~--~ 87 (242)
+++ +...+.++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++...+..... ..+. ..+++ +
T Consensus 164 ~~~l~~~l~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~~~s 241 (409)
T 2gb3_A 164 PQNLESFINERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVVIDS 241 (409)
T ss_dssp CTTGGGGCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEEEEE
T ss_pred HHHHHHhhCcCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEEEec
Confidence 444 33334578999999999999965 56789999999999999999999999877554432221 1122 23554 3
Q ss_pred eecccc-CCccchheeEeCh-hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHhhcC
Q psy6548 88 LGKALS-GGLYPISAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRSELRSRLS 163 (242)
Q Consensus 88 ~sK~~~-~g~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~~l~~~l~ 163 (242)
+||+++ +| +|+||+++++ ++++.+......++ +.+++++.++.++++... -+++.++++++++++++.| ++++
T Consensus 242 ~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g 318 (409)
T 2gb3_A 242 VSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKL-EEHG 318 (409)
T ss_dssp STTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred chhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-HHcC
Confidence 789998 88 8999999998 88887765434444 778888888777775321 1345677888888899999 6553
Q ss_pred CCCCC-eEeeeceeEEEEecCCchhHHHHHHHHHHC------CceeccC---------CCCEEEEeccCcCCHHHHHHHH
Q psy6548 164 PDIVP-VVRGKGLLNAIVLDKSILEVYDVCIKMKDA------GLVTKPI---------SNNIIRLSPALNITEQELREGL 227 (242)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------gi~~~~~---------~~~~lR~~~~~~~t~e~i~~~~ 227 (242)
+.. ..+..++++|+.++. .+..++.++|.++ ||.+.++ +++++|++++ .+++++++++
T Consensus 319 --~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~ 392 (409)
T 2gb3_A 319 --LKRFTKPSGAFYITAELPV--EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAI 392 (409)
T ss_dssp --CCCBCCCSBSSEEEEECSS--SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHH
T ss_pred --ceeeeCCCeeEEEEEEeCC--CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHH
Confidence 222 223457788888863 4678899999987 9999764 2679999977 7999999999
Q ss_pred HHHHHHHHHHhh
Q psy6548 228 DIIINTINTMAA 239 (242)
Q Consensus 228 ~~l~~~l~~~~~ 239 (242)
++|+++++++.+
T Consensus 393 ~~l~~~l~~~~~ 404 (409)
T 2gb3_A 393 DVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhh
Confidence 999999988653
No 59
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.92 E-value=5.4e-25 Score=185.77 Aligned_cols=221 Identities=12% Similarity=0.114 Sum_probs=161.1
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-cccc-----CCCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHY-----EDVRP 83 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~-----~~~~~ 83 (242)
|+++ +...+.++++|++++++|++|.+ .+.+.+++|+++|++||+++|+||+|+++...+... .... .+...
T Consensus 152 d~~~l~~~l~~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
T 1j32_A 152 SPEQIRQAITPKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV 230 (388)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred CHHHHHHhcCcCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEE
Confidence 5566 44334579999999999999965 467889999999999999999999998875544321 1111 12233
Q ss_pred CEEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh
Q psy6548 84 DIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 84 ~~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~ 160 (242)
.+.++||+++ +| +|+||+++++++++.+.+.....+++.+++++.++.++++.... ++..++++++++++++.| +
T Consensus 231 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~ 308 (388)
T 1j32_A 231 VCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDAL-N 308 (388)
T ss_dssp EEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH-h
Confidence 3455899998 88 89999999999888776644556777888888887777763211 345677788888898999 6
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHH-CCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
.++. +....+..++++|+.++..+.+..++.++|.+ +||.+.++. ++++|++++ ++++++++++++|+++++
T Consensus 309 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 309 AMPG-LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp TCTT-CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred hCCC-CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 6632 22222344667777765311357889999986 799998752 578999965 799999999999999887
Q ss_pred HH
Q psy6548 236 TM 237 (242)
Q Consensus 236 ~~ 237 (242)
++
T Consensus 386 ~~ 387 (388)
T 1j32_A 386 GI 387 (388)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 60
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.92 E-value=1.6e-24 Score=185.39 Aligned_cols=213 Identities=14% Similarity=0.080 Sum_probs=154.9
Q ss_pred CCEEEEEEc-ccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCC---CCCCEEEeeccccC
Q psy6548 20 PNICAFMVE-PIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYED---VRPDIVILGKALSG 94 (242)
Q Consensus 20 ~~~~~i~~e-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~---~~~~~~~~sK~~~~ 94 (242)
+++++|++. .++|++|. +.+.+.+++|+++|++||+++|+||+|+++...|.. ..+..++ ....+.++||++++
T Consensus 189 ~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~ 267 (425)
T 2r2n_A 189 NTPKFLYTVPNGNNPTGN-SLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISS 267 (425)
T ss_dssp CCCSEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCS
T ss_pred CCceEEEECCCCcCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccC
Confidence 467888775 57888985 567788999999999999999999999876544431 1111122 11223448999998
Q ss_pred CccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHhh-cCCCC
Q psy6548 95 GLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-------ENMIENAYKMGEIFRSELRSR-LSPDI 166 (242)
Q Consensus 95 g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-------~~~~~~~~~~~~~l~~~l~~~-l~~~~ 166 (242)
| +|+||+++++++++.+.......+++.+++++.++.++++.+.. +...+.++++++.+.+.| +. ++...
T Consensus 268 G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~ 345 (425)
T 2r2n_A 268 G-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAA-DKWLTGLA 345 (425)
T ss_dssp T-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCSSSE
T ss_pred c-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCe
Confidence 9 99999999999988877644555677889999888888875321 234566677778888888 44 43211
Q ss_pred CCeEeeeceeEEEEecCCchhHHH-HHHHHHHCCceeccC---------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 167 VPVVRGKGLLNAIVLDKSILEVYD-VCIKMKDAGLVTKPI---------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~~~~~---------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
....+..|+++|++++.. .+..+ +.+.|.++||.+.|+ +.+++|++++. .+++++++++++|++++++
T Consensus 346 ~~~~p~~g~~~~~~~~~~-~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 346 EWHVPAAGMFLWIKVKGI-NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp EECCCSBSSEEEEEETTC-SCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCceEEEEEEeCCC-CCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 112245688999999764 34445 578889999999864 24789999764 5999999999999998875
Q ss_pred H
Q psy6548 237 M 237 (242)
Q Consensus 237 ~ 237 (242)
.
T Consensus 424 ~ 424 (425)
T 2r2n_A 424 S 424 (425)
T ss_dssp H
T ss_pred h
Confidence 3
No 61
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.92 E-value=1e-24 Score=183.72 Aligned_cols=216 Identities=17% Similarity=0.201 Sum_probs=157.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc-cccc-c-cCCCCCCEE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-LLAI-H-YEDVRPDIV 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~-~-~~~~~~~~~ 86 (242)
|+++ +...++++++|++++++|++|.+ .+.+++++|+++|++||+++|+||+|+++.. |. ...+ . ..+....+.
T Consensus 141 d~~~l~~~l~~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~ 218 (381)
T 1v2d_A 141 DLSALEKALTPRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVG 218 (381)
T ss_dssp CHHHHHTTCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEE
T ss_pred CHHHHHHhcCcCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEe
Confidence 5666 44445679999999999999965 5568899999999999999999999987643 32 1111 1 234444455
Q ss_pred Eeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--h--ccHHHHHHHHHHHHHHHHHhh
Q psy6548 87 ILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--E--ENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 87 ~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--~--~~~~~~~~~~~~~l~~~l~~~ 161 (242)
++||+++ +| +|+||+++++++++.+.......+++.+++++.++.++++... . +++.++++++++++.+.| ++
T Consensus 219 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~ 296 (381)
T 1v2d_A 219 SAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGL-RA 296 (381)
T ss_dssp EHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred echhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 5889998 88 8999999998888877654344466778888888888888552 2 346777888889999999 55
Q ss_pred cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 162 LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
.+ +....+..++++|+.++.. + +.+.|.++||.+.++ +.+++|++++. +++++++++++|+++
T Consensus 297 ~g--~~~~~~~~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 297 MG--LRVYVPEGTYFLMAELPGW--D---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRV 367 (381)
T ss_dssp TT--CCEECCSBSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CC--CEecCCCcceEEEEecChH--h---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 43 2222233467888888764 2 677788999999764 36799999765 999999999999999
Q ss_pred HHHHhh
Q psy6548 234 INTMAA 239 (242)
Q Consensus 234 l~~~~~ 239 (242)
+++.++
T Consensus 368 l~~~r~ 373 (381)
T 1v2d_A 368 VNSPRE 373 (381)
T ss_dssp C-----
T ss_pred Hhhccc
Confidence 887654
No 62
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.92 E-value=7.1e-25 Score=186.67 Aligned_cols=212 Identities=14% Similarity=0.174 Sum_probs=156.6
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccC----CCCCCEEEeecccc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYE----DVRPDIVILGKALS 93 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~----~~~~~~~~~sK~~~ 93 (242)
++++++|+++.++|++|.+ ++.+++++|+++|++||+++|+||+|+++...|.. ..+..+ +....+.++||+++
T Consensus 170 ~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (412)
T 2x5d_A 170 IPKPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN 248 (412)
T ss_dssp ESCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS
T ss_pred ccCceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC
Confidence 3577888887788999954 56789999999999999999999999887554431 111122 22222344899998
Q ss_pred -CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhhcCCCCCCeE
Q psy6548 94 -GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSRLSPDIVPVV 170 (242)
Q Consensus 94 -~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~ 170 (242)
+| +|+||+++++++++.+.......+++.+++++.++.++++..+. +++.++++++++.+.+.| +.++ +....
T Consensus 249 ~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g--~~~~~ 324 (412)
T 2x5d_A 249 MAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGL-REAG--WMVEN 324 (412)
T ss_dssp CTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHH-HHHT--CCCCC
T ss_pred Ccc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH-HHCC--CEecC
Confidence 89 89999999999988877644445677889998888877764321 346677888888899999 5553 22222
Q ss_pred eeeceeEEEEecCCch---hHHHHHHHHHH-CCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 171 RGKGLLNAIVLDKSIL---EVYDVCIKMKD-AGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 171 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~-~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+..++++|+.++.. . +..++.+.|.+ +||.+.++ +.+++|++++. +++++++++++|+++++++.
T Consensus 325 ~~~g~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 325 PKASMYVWAKIPEP-YAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp CSBSSEEEEECCTT-TGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred CCeeeEEEEEcCCc-cCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence 33467888888653 3 57789999875 69999875 35799999764 89999999999999998754
No 63
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.92 E-value=1.3e-24 Score=183.41 Aligned_cols=216 Identities=14% Similarity=0.057 Sum_probs=156.4
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCCC-----C
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYEDV-----R 82 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~-----~ 82 (242)
|+++ +.+.+ ++++++++++|++|. +.+.+.+++|+++|++||+++|+||+|+++...|... .+..+.. .
T Consensus 154 d~~~l~~~l~~--~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 230 (391)
T 4dq6_A 154 DYEDIENKIKD--VKLFILCNPHNPVGR-VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNT 230 (391)
T ss_dssp CHHHHHHHCTT--EEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTE
T ss_pred eHHHHHHHhhc--CCEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcE
Confidence 5666 44444 899999999999995 5566779999999999999999999998876555321 1111111 1
Q ss_pred CCEEEeecccc-CCccchheeEeCh-hhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHH
Q psy6548 83 PDIVILGKALS-GGLYPISAVLADD-EVMGTLVPGT-HGSTYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRSE 157 (242)
Q Consensus 83 ~~~~~~sK~~~-~g~~~~g~~~~~~-~~~~~l~~~~-~~~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~~ 157 (242)
..+.++||+++ +| +|+||+++++ ++++.+.... ...+++.+++++.++.++++... .++..++++++++.+++.
T Consensus 231 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (391)
T 4dq6_A 231 ITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKY 309 (391)
T ss_dssp EEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 12334889998 88 8999999875 7877776542 23345678888888888877532 134567788888888888
Q ss_pred HHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC------CCCEEEEeccCcCCHHHHHHHHHH
Q psy6548 158 LRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI------SNNIIRLSPALNITEQELREGLDI 229 (242)
Q Consensus 158 l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~ 229 (242)
| +. ++. +....+..+++.|+.++....+..++.++|.++ ||.+.++ +.+++|++++ .+++++++++++
T Consensus 310 l-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~ 385 (391)
T 4dq6_A 310 I-NENMPK-LKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIR 385 (391)
T ss_dssp H-HHHCTT-SEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHH
T ss_pred H-HhhCCC-CEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHH
Confidence 8 54 442 222223445677788875225788999999998 9999864 3589999966 699999999999
Q ss_pred HHHHH
Q psy6548 230 IINTI 234 (242)
Q Consensus 230 l~~~l 234 (242)
|++++
T Consensus 386 l~~~l 390 (391)
T 4dq6_A 386 IKNAI 390 (391)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98876
No 64
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=2.7e-24 Score=181.72 Aligned_cols=222 Identities=11% Similarity=0.082 Sum_probs=158.9
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCCCC-CC-
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYEDVR-PD- 84 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~-~~- 84 (242)
.|+++ +.+.++++++|+++.++|++|.+ .+.+++++|+++|++||+++|+||+|+++...|... ........ .|
T Consensus 149 ~d~~~l~~~l~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~ 227 (390)
T 1d2f_A 149 CDMGKLEAVLAKPECKIMLLCSPQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL 227 (390)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE
T ss_pred cCHHHHHHHhccCCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh
Confidence 35666 44555588998888889999965 456789999999999999999999999876555322 11111111 12
Q ss_pred EEEeecccc-CCccchheeEeC-hhhhhccCCCCC-CCCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Q psy6548 85 IVILGKALS-GGLYPISAVLAD-DEVMGTLVPGTH-GSTY-GGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 85 ~~~~sK~~~-~g~~~~g~~~~~-~~~~~~l~~~~~-~~~~-~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l 158 (242)
+.++||+++ +| +|+||++++ +++++.+..... ..++ +.+++++.++.++++.... ++..++++++++.+++.|
T Consensus 228 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 306 (390)
T 1d2f_A 228 LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKM 306 (390)
T ss_dssp EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 666999998 89 899999985 778777765434 4454 6788888888888774221 345677888888888888
Q ss_pred Hhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 159 RSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 159 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
++ ++. +....+..++++|+.++..+.+..++.+.|. ++||.+.++ +++++|++++. +++++++++++|
T Consensus 307 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l 382 (390)
T 1d2f_A 307 -NAAFPE-LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGL 382 (390)
T ss_dssp -HHHCSS-CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHH
T ss_pred -HhhCCC-CEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 55 542 2112233456678888652125778999999 689999875 25799999664 689999999999
Q ss_pred HHHHHHH
Q psy6548 231 INTINTM 237 (242)
Q Consensus 231 ~~~l~~~ 237 (242)
+++++++
T Consensus 383 ~~~l~~~ 389 (390)
T 1d2f_A 383 INAIRAV 389 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9988764
No 65
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.92 E-value=6.8e-26 Score=192.30 Aligned_cols=222 Identities=15% Similarity=0.147 Sum_probs=158.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCC-C----CC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYED-V----RP 83 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~-~----~~ 83 (242)
|+++ +...+.++++|+++.++|++|. +++.+.+++|+++|++||+++|+||+|+++...+... .....+ . ..
T Consensus 168 d~~~l~~~l~~~~~~v~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i 246 (407)
T 3nra_A 168 DLTGLEEAFKAGARVFLFSNPNNPAGV-VYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVV 246 (407)
T ss_dssp CHHHHHHHHHTTCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEE
T ss_pred CHHHHHHHHhhCCcEEEEcCCCCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEE
Confidence 5555 3322337778888888999995 5567889999999999999999999998876555422 222222 1 12
Q ss_pred CEEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHh
Q psy6548 84 DIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 84 ~~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~~l~~ 160 (242)
.+.++||+++ +| +|+||+++++++++.+.......+++.+++++.++.++++... -++..++++++++++++.| +
T Consensus 247 ~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~ 324 (407)
T 3nra_A 247 TIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVL-R 324 (407)
T ss_dssp EEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH-h
Confidence 2334889999 88 8999999999998888765555666777877776665554211 1234566777888888888 6
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHH-CCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
.++. +....+..++++|+.++....+..++.++|.+ +||.+.++ +.+++|++++ .+++++++++++|+++
T Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~ 401 (407)
T 3nra_A 325 GCEG-VFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS--QDHEAAVAAARRIVTL 401 (407)
T ss_dssp TSTT-CBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred cCCC-ceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 6532 22222344678888887632567889999976 59999864 4689999966 4999999999999999
Q ss_pred HHHHh
Q psy6548 234 INTMA 238 (242)
Q Consensus 234 l~~~~ 238 (242)
++++.
T Consensus 402 ~~~~~ 406 (407)
T 3nra_A 402 VERYR 406 (407)
T ss_dssp HHHHB
T ss_pred HHHhh
Confidence 88753
No 66
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=1.1e-24 Score=186.78 Aligned_cols=211 Identities=14% Similarity=0.108 Sum_probs=150.2
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccc-cc----cCCCC-----CC----E
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-IH----YEDVR-----PD----I 85 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~----~~~~~-----~~----~ 85 (242)
.++++|++++++|++|. +++.+.+++|+++|++||+++|+||+|+++++.+..+. .. ..+.+ ++ +
T Consensus 190 ~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i 268 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGT-TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVV 268 (435)
T ss_dssp CCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEE
T ss_pred CCeEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEE
Confidence 47999999999999995 55667899999999999999999999988655543221 11 11111 23 3
Q ss_pred EEeecccc-CCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHH
Q psy6548 86 VILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---E--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 86 ~~~sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~---~--~~~~~~~~~~~~~l~~~l 158 (242)
.++||+|+ +| +|+||+++ ++.+++.+.. ....+..+++++.++.++++... . ++..++++++++++++.|
T Consensus 269 ~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 345 (435)
T 3piu_A 269 YSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL 345 (435)
T ss_dssp EESSSSSCCGG-GCEEEEEESCHHHHHHHHH--HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeecccCCCc-eeEEEEEeCCHHHHHHHHH--HhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44899999 89 99999998 4666666654 33344567777777666665322 1 234566777778888888
Q ss_pred HhhcCCCCCCeEeeeceeEEEEecCCc-----hhHHHHHHHHHHC-CceeccC------CCCEEEEeccCcCCHHHHHHH
Q psy6548 159 RSRLSPDIVPVVRGKGLLNAIVLDKSI-----LEVYDVCIKMKDA-GLVTKPI------SNNIIRLSPALNITEQELREG 226 (242)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~-gi~~~~~------~~~~lR~~~~~~~t~e~i~~~ 226 (242)
+.++ +....+..|+++|+.++... .+..++.+.|+++ ||.+.++ +++++|++++.. ++++++++
T Consensus 346 -~~~g--~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~ 421 (435)
T 3piu_A 346 -QKSG--ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLA 421 (435)
T ss_dssp -HTTT--CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHH
T ss_pred -HhcC--CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHH
Confidence 5543 22222334589999987631 1466888999887 9999863 468999997655 99999999
Q ss_pred HHHHHHHHHHHh
Q psy6548 227 LDIIINTINTMA 238 (242)
Q Consensus 227 ~~~l~~~l~~~~ 238 (242)
+++|+++++++.
T Consensus 422 l~~l~~~l~~~~ 433 (435)
T 3piu_A 422 MQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 67
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=6.4e-25 Score=185.65 Aligned_cols=214 Identities=19% Similarity=0.202 Sum_probs=158.1
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-C-CCCCEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE-D-VRPDIV- 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~-~~~~~~- 86 (242)
|+++ +...+.++++|++++++|++|. +++.+++++|+++|++||+++|+||+|+++...|.......+ + ...+++
T Consensus 163 d~~~l~~~l~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~ 241 (389)
T 1o4s_A 163 SLEEVEGLLVGKTKAVLINSPNNPTGV-VYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYI 241 (389)
T ss_dssp CHHHHHHTCCTTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEE
T ss_pred CHHHHHHhcccCceEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEE
Confidence 5666 4444457899999999999995 456789999999999999999999999876554422111111 1 123433
Q ss_pred -Eeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC
Q psy6548 87 -ILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP 164 (242)
Q Consensus 87 -~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 164 (242)
++||+++ +| +|+||+++++++++.+.+....++++.+++++.++.++++.. .+++.++++++++++++.| +.++
T Consensus 242 ~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L-~~~g- 317 (389)
T 1o4s_A 242 NGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERL-KKMG- 317 (389)
T ss_dssp EESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHH-HHTT-
T ss_pred eechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHH-HhcC-
Confidence 4889998 88 899999999998888776444556777888887777666532 2456788888999999999 6653
Q ss_pred CCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 165 DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
+....+..++++|+.++ . +..++.++|. ++||.+.++. ++++|++++ .+++++++++++|+++++
T Consensus 318 -~~~~~~~~~~~~~~~~~-~--~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 318 -VKFVEPEGAFYLFFKVR-G--DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp -CCCCCCSBSSEEEEECS-S--CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred -CeeecCCcceEEEEeCC-C--CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 22222334677888876 2 4678999997 8899998752 469999966 499999999999988764
No 68
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=4.1e-24 Score=178.82 Aligned_cols=214 Identities=11% Similarity=0.080 Sum_probs=156.4
Q ss_pred ccccCCC-----Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccc-c
Q psy6548 4 QFPVKSK-----QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-I 76 (242)
Q Consensus 4 ~~~~~~~-----d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~ 76 (242)
+..+|++ |+++ +...++++++|++++++|++|.+. +.+.+.++++.|++ |+++|+||+|+++.. +.... .
T Consensus 132 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~ 208 (363)
T 3ffh_A 132 VREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYI-ELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHE 208 (363)
T ss_dssp EEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC-CHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCG
T ss_pred EEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHH
Confidence 4456666 7777 444456899999999999999655 54556666666665 999999999998765 43221 1
Q ss_pred ccCCCCCC---EEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Q psy6548 77 HYEDVRPD---IVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMG 151 (242)
Q Consensus 77 ~~~~~~~~---~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~ 151 (242)
...+...+ +.++||.++ +| +|+||+++++++++.+.+.. .+++.++++++++.++++..+. ++..+++++++
T Consensus 209 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 285 (363)
T 3ffh_A 209 KLVRTYKNLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVR--PPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGI 285 (363)
T ss_dssp GGGGTCTTEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTC--CSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 22122222 334889999 89 89999999999988887643 3677889999888888863321 34567778888
Q ss_pred HHHHHHHHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC----CCEEEEeccCcCCHHHHHHH
Q psy6548 152 EIFRSELRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQELREG 226 (242)
Q Consensus 152 ~~l~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~ 226 (242)
+++++.| +. .+ ....++.+.++++.++. +..++.+.|.++||.+.++. ++++|++++ ++++++++
T Consensus 286 ~~l~~~l-~~~~g---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~ 355 (363)
T 3ffh_A 286 KQYEAFA-KRFEK---VKLYPANGNFVLIDLGI---EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAV 355 (363)
T ss_dssp HHHHHHH-HHCTT---CEECCCCSSEEEEECSS---CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHH
T ss_pred HHHHHHH-hhCCC---ceECCCCCeEEEEECCC---CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHH
Confidence 8888888 55 33 11224456788888865 47889999999999998863 689999954 99999999
Q ss_pred HHHHHHH
Q psy6548 227 LDIIINT 233 (242)
Q Consensus 227 ~~~l~~~ 233 (242)
++.|+++
T Consensus 356 ~~~l~~~ 362 (363)
T 3ffh_A 356 IALLEKL 362 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 69
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.92 E-value=2.2e-24 Score=183.97 Aligned_cols=219 Identities=17% Similarity=0.150 Sum_probs=159.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCC----CCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDV----RPD 84 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~----~~~ 84 (242)
|+++ +...++++++|++++++|++|.+. +++.+++|+++|++||+++|+||+|+++.+.+.. ..+..+.. ...
T Consensus 163 d~~~l~~~~~~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (422)
T 3fvs_A 163 DPMELAGKFTSRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLT 241 (422)
T ss_dssp CHHHHHTTCCTTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEE
T ss_pred CHHHHHhhcCCCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEE
Confidence 4555 444456899999999999999655 7788999999999999999999999987655532 12222221 122
Q ss_pred EEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH-------Hh--ccHHHHHHHHHHHH
Q psy6548 85 IVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI-------LE--ENMIENAYKMGEIF 154 (242)
Q Consensus 85 ~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~-------~~--~~~~~~~~~~~~~l 154 (242)
+.++||.++ +| +|+||+++++++++.+.......+++.+++++.++.++++.. .. ++..++++++++++
T Consensus 242 ~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (422)
T 3fvs_A 242 IGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHM 320 (422)
T ss_dssp EEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHH
T ss_pred EecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHH
Confidence 334889998 89 999999999998888776555667788899998888887741 11 33567777788888
Q ss_pred HHHHHhhcCCCCCCeEeeeceeEEEEecCCch------------hHHHHHHHHH-HCCceeccC-----------CCCEE
Q psy6548 155 RSELRSRLSPDIVPVVRGKGLLNAIVLDKSIL------------EVYDVCIKMK-DAGLVTKPI-----------SNNII 210 (242)
Q Consensus 155 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~-~~gi~~~~~-----------~~~~l 210 (242)
++.| +.++ +....+..++++|+.++.... ...++.+.|+ ++||.+.++ +.+++
T Consensus 321 ~~~L-~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~i 397 (422)
T 3fvs_A 321 IRSL-QSVG--LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYI 397 (422)
T ss_dssp HHHH-HTTT--CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEE
T ss_pred HHHH-HHcC--CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeE
Confidence 8888 5553 222345567888888765210 0457777765 479999773 36899
Q ss_pred EEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 211 RLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 211 R~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
|+++ ..+++++++++++|++++++
T Consensus 398 Ris~--~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 398 RFCF--VKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEC--CCCHHHHHHHHHHHHHHHHC
T ss_pred EEEe--cCCHHHHHHHHHHHHHHHhh
Confidence 9994 45999999999999998764
No 70
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.92 E-value=1.4e-24 Score=183.59 Aligned_cols=205 Identities=13% Similarity=0.041 Sum_probs=150.2
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC-ccccc-c-------cCCCCCCEEEeec
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG-KLLAI-H-------YEDVRPDIVILGK 90 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g-~~~~~-~-------~~~~~~~~~~~sK 90 (242)
.+++++++++++|++|.+ .+.+.+++|+++|++||+++|+||+|+++...+ .+... . ..+....+.++||
T Consensus 167 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 245 (396)
T 3jtx_A 167 KRTKLVFVCSPNNPSGSV-LDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSK 245 (396)
T ss_dssp HTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTT
T ss_pred cCcEEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccc
Confidence 478999988889999965 456779999999999999999999999876655 22221 1 1233334555899
Q ss_pred ccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy6548 91 ALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVP 168 (242)
Q Consensus 91 ~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~ 168 (242)
+++ +| +|+||+++++++++.+.......+++.+++++.++.++++..+. ++..++++++++.+.+.| +... ..
T Consensus 246 ~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~~~~---~~ 320 (396)
T 3jtx_A 246 RSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPIL-QQVF---DV 320 (396)
T ss_dssp TSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-TTTS---CC
T ss_pred ccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH-HhcC---Cc
Confidence 987 78 99999999999988887654555677888998888877763111 234556666677777777 4431 12
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------------CCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------------SNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
..+..++++|+.++.. +..++.+.|. ++||.+.|+ +.+++|++++ .+++++++++++|++++
T Consensus 321 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 321 KLPDASFYIWLKVPDG--DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp CCCSSSSEEEEECTTS--CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred cCCCeeEEEEEECCCC--CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 2334578899998763 5778888886 469999763 3589999965 49999999999998764
No 71
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.92 E-value=3.1e-25 Score=188.56 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=155.7
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC----CCCCCEEEeecccc-
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE----DVRPDIVILGKALS- 93 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~----~~~~~~~~~sK~~~- 93 (242)
++++++|++++++|++|.+ .+.+++++|+++|++||+++|+||+|+++...|........ +....+.++||+++
T Consensus 179 ~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~ 257 (404)
T 2o1b_A 179 IDKTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNM 257 (404)
T ss_dssp HHHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTC
T ss_pred ccCceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccC
Confidence 3578999998889999965 56789999999999999999999999887544432111111 11122445899998
Q ss_pred CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEe
Q psy6548 94 GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSRLSPDIVPVVR 171 (242)
Q Consensus 94 ~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 171 (242)
+| +|+||+++++++++.+.......+++.+++++.++.++++.... ++..+.++++++.+++.| ++++ +....+
T Consensus 258 ~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g--~~~~~~ 333 (404)
T 2o1b_A 258 SG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAML-AKAD--LPFVHA 333 (404)
T ss_dssp GG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHTT--CCEECC
T ss_pred ch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HhcC--CeecCC
Confidence 88 89999999999988887644455667888998888888775321 345667788888888888 5553 222223
Q ss_pred eeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 172 GKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
..++++|+.++.. .+..++.+.|. ++||.+.++ +.+++|++++. +++++++++++|++++++
T Consensus 334 ~~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 334 KGGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp CBSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred CcceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 3467789988754 46778899987 579999875 25799999764 788999999999887654
No 72
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=1.4e-24 Score=182.42 Aligned_cols=202 Identities=13% Similarity=0.056 Sum_probs=150.6
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccc-c--------cCCCCCCEEEeec
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAI-H--------YEDVRPDIVILGK 90 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~-~--------~~~~~~~~~~~sK 90 (242)
+++++++++.++|++|. +++.+.+++|+++|++||+++|+||+|.++...+..... . ..+....+.++||
T Consensus 153 ~~~~~v~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 231 (376)
T 3ezs_A 153 QEVDLVILNSPNNPTGR-TLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSK 231 (376)
T ss_dssp HHCSEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTT
T ss_pred cCCCEEEEcCCCCCcCC-CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchh
Confidence 36788888888999995 456678999999999999999999999987655532221 1 2233333455899
Q ss_pred ccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy6548 91 ALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVP 168 (242)
Q Consensus 91 ~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~ 168 (242)
++| +| +|+||+++++++++.+.......+++.+++++.++.++++..+. ++..++++++++.+.+.| + .+.
T Consensus 232 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~----~~~- 304 (376)
T 3ezs_A 232 RSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIF-K----NTL- 304 (376)
T ss_dssp TTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHS-T----TCC-
T ss_pred ccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHh-c----CCC-
Confidence 997 88 99999999999988887655556778889998888877763211 234455555555565555 3 222
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHHH-CCceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPI--------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.+..++++|+.++ +..++.+.|.+ +||.+.++ +.+++|++++ .+++++++++++|++++++
T Consensus 305 -~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 305 -IYPYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp -CCSBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred -CCCcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence 4567788999886 35788899988 89999763 4689999965 4999999999999998764
No 73
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.92 E-value=1.8e-25 Score=187.83 Aligned_cols=226 Identities=12% Similarity=0.076 Sum_probs=160.5
Q ss_pred ccccCCC---Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC-cc-cccc
Q psy6548 4 QFPVKSK---QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG-KL-LAIH 77 (242)
Q Consensus 4 ~~~~~~~---d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g-~~-~~~~ 77 (242)
+..+|.+ |+++ +...+.++++++++.++|++|. ..+.+.+++|+++|++||+++|+||+|+++...| .. ..+.
T Consensus 129 ~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 207 (377)
T 3fdb_A 129 GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGM-VFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGV 207 (377)
T ss_dssp EEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGS
T ss_pred EEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHH
Confidence 3455655 6777 3332334778888888999995 4566779999999999999999999999876655 21 1111
Q ss_pred c---CCCCCCEEEeecccc-CCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHH
Q psy6548 78 Y---EDVRPDIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKM 150 (242)
Q Consensus 78 ~---~~~~~~~~~~sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~ 150 (242)
. .+....+.++||+++ +| +|+||++. ++++++.+.......+++.+++++.++.++++.... ++..++++++
T Consensus 208 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 286 (377)
T 3fdb_A 208 SDTAASVCITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNN 286 (377)
T ss_dssp CHHHHHHEEEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HccCCCcEEEEEeChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 1 111123445889997 88 89998775 788888877655555678899999888888875322 4567788888
Q ss_pred HHHHHHHHHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC------CCCEEEEeccCcCCHHH
Q psy6548 151 GEIFRSELRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI------SNNIIRLSPALNITEQE 222 (242)
Q Consensus 151 ~~~l~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~------~~~~lR~~~~~~~t~e~ 222 (242)
++++++.| +. ++. +....+..+++.|+.++... ...++.+.|+++ ||.+.++ +++++|++++ .++++
T Consensus 287 ~~~l~~~L-~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~~e~ 361 (377)
T 3fdb_A 287 HDFLLHEI-PKRIPG-AKITPMQATYLMWIDFRDTT-IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TSREV 361 (377)
T ss_dssp HHHHHHHH-HHHSTT-CEECCCSBCSEEEEECTTSC-CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHH
T ss_pred HHHHHHHH-HhhCCC-ceEecCCeeEEEEEECcccC-CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CCHHH
Confidence 99999999 55 442 22222344566788887642 225677777766 9999875 2689999966 58999
Q ss_pred HHHHHHHHHHHHHH
Q psy6548 223 LREGLDIIINTINT 236 (242)
Q Consensus 223 i~~~~~~l~~~l~~ 236 (242)
+++++++|++++++
T Consensus 362 i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 362 LEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998865
No 74
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.92 E-value=3.5e-24 Score=181.47 Aligned_cols=223 Identities=13% Similarity=0.118 Sum_probs=159.5
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCCC--CCC-
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYEDV--RPD- 84 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~--~~~- 84 (242)
|+++ +.+.++++++|+++.++|++|. +++.+++++|+++|++||+++|+||+|+++...|.. .....+.. .++
T Consensus 152 d~~~l~~~l~~~~~~~v~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 230 (399)
T 1c7n_A 152 DFQKLEKLSKDKNNKALLFCSPHNPVGR-VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKT 230 (399)
T ss_dssp CHHHHHHHHTCTTEEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTE
T ss_pred cHHHHHHHhccCCCcEEEEcCCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcE
Confidence 5666 4455468999999889999995 557789999999999999999999999987655532 12222210 122
Q ss_pred --EEEeecccc-CCccchheeEeC-hhhhhccCCCCCCCCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Q psy6548 85 --IVILGKALS-GGLYPISAVLAD-DEVMGTLVPGTHGSTY-GGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 85 --~~~~sK~~~-~g~~~~g~~~~~-~~~~~~l~~~~~~~~~-~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~ 157 (242)
+.++||+++ +| +|+||++++ +++++.+.+....+++ +.+++++.++.++++.... +...+.++++++++++.
T Consensus 231 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (399)
T 1c7n_A 231 ITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDF 309 (399)
T ss_dssp EEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 334889999 89 899999986 5688877654344444 5688888888877764211 34566778888888888
Q ss_pred HHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHH
Q psy6548 158 LRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDI 229 (242)
Q Consensus 158 l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~ 229 (242)
| ++ ++. +....+..+++.|+.++..+.+..++.+.|. ++||.+.++ +++++|++++. +++++++++++
T Consensus 310 L-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~ 385 (399)
T 1c7n_A 310 F-EVNHPE-IKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLER 385 (399)
T ss_dssp H-HHHCTT-SBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHH
T ss_pred H-HhhCCC-CeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHH
Confidence 8 55 542 2222233456668888752135778999998 689999875 35799999664 58899999999
Q ss_pred HHHHHHHHhh
Q psy6548 230 IINTINTMAA 239 (242)
Q Consensus 230 l~~~l~~~~~ 239 (242)
|+++++++.+
T Consensus 386 l~~~l~~~~~ 395 (399)
T 1c7n_A 386 LNKALKDLKN 395 (399)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 75
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.92 E-value=6.4e-25 Score=184.27 Aligned_cols=217 Identities=16% Similarity=0.168 Sum_probs=159.1
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-CC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE-DV 81 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~ 81 (242)
+..+| .|+++ +...+.++++|++++++|++|.+.+ .+ |+++|++||+++|+||+|+++...|.......+ +.
T Consensus 137 ~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 210 (370)
T 2z61_A 137 PVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDEN 210 (370)
T ss_dssp EEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred EEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCC
Confidence 34455 56777 4433457899999999999997766 33 999999999999999999876554432222222 11
Q ss_pred -CCCEE--Eeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH-HHh--ccHHHHHHHHHHHH
Q psy6548 82 -RPDIV--ILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV-ILE--ENMIENAYKMGEIF 154 (242)
Q Consensus 82 -~~~~~--~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~-~~~--~~~~~~~~~~~~~l 154 (242)
..+++ ++||+++ +| +|+||+++++++++.+......++++.+++++.++.++++. ... ++..++++++++++
T Consensus 211 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 289 (370)
T 2z61_A 211 LEKTILINGFSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLV 289 (370)
T ss_dssp CSSEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 22333 4889998 88 89999999999988887654555667888888888877765 222 44667788889999
Q ss_pred HHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHH
Q psy6548 155 RSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGL 227 (242)
Q Consensus 155 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~ 227 (242)
.+.| +.++ +....+..++++|+.++. +..++.++|. ++||.+.++ +.+++|++++ ++++++++++
T Consensus 290 ~~~L-~~~g--~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~ 361 (370)
T 2z61_A 290 LKYV-KDFG--WEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGL 361 (370)
T ss_dssp HHHH-HHTT--CBCCCCCBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHH
T ss_pred HHHH-HHcC--CeecCCCcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHH
Confidence 9999 6553 222223446777877764 4678999998 789999875 2678999977 6999999999
Q ss_pred HHHHHHHH
Q psy6548 228 DIIINTIN 235 (242)
Q Consensus 228 ~~l~~~l~ 235 (242)
++|+++++
T Consensus 362 ~~l~~~l~ 369 (370)
T 2z61_A 362 ERIKEFLN 369 (370)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99988764
No 76
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=3e-24 Score=183.69 Aligned_cols=209 Identities=16% Similarity=0.138 Sum_probs=153.4
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-c---cccC----CCCCC----EEE
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-A---IHYE----DVRPD----IVI 87 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~---~~~~----~~~~~----~~~ 87 (242)
.++++|++++++|++|. +.+.+++++|+++|++||+++|+||+|.++...+..+ . .... ++.+| +.+
T Consensus 187 ~~~~~v~l~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s 265 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGT-TLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYS 265 (428)
T ss_dssp CCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEE
T ss_pred CceEEEEEcCCCCCCCC-cCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEec
Confidence 47899898888999995 5577899999999999999999999998865443221 1 1110 12255 344
Q ss_pred eecccc-CCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHh
Q psy6548 88 LGKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---E--ENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 88 ~sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~---~--~~~~~~~~~~~~~l~~~l~~ 160 (242)
+||+++ +| +|+||+++ ++++++.+.. ....++.+++++.++.++++... . ++..++++++++++++.| +
T Consensus 266 ~sK~~g~~G-lr~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~ 341 (428)
T 1iay_A 266 LSKDMGLPG-FRVGIIYSFNDDVVNCARK--MSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGL-E 341 (428)
T ss_dssp STTTSSCGG-GCEEEEEESCHHHHHHHHH--HHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred chhhcCCCC-ceEEEEEeCCHHHHHHHHH--HHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 899998 89 89999998 6778777664 22345678888888877776432 1 346677788888888989 6
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCc-----hhHHHHHHHHHHC-CceeccCC------CCEEEEeccCcCCHHHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSI-----LEVYDVCIKMKDA-GLVTKPIS------NNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~-gi~~~~~~------~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
.++ +.......|+++|++++... ....++.+.|.++ ||.+.++. ++++|++++ ..++++++++++
T Consensus 342 ~~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~ 418 (428)
T 1iay_A 342 VVG--IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALA 418 (428)
T ss_dssp HTT--CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHH
T ss_pred hcC--CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHH
Confidence 653 22112236788999887521 1456789999987 99998752 578999987 579999999999
Q ss_pred HHHHHHHH
Q psy6548 229 IIINTINT 236 (242)
Q Consensus 229 ~l~~~l~~ 236 (242)
+|++++++
T Consensus 419 ~l~~~l~~ 426 (428)
T 1iay_A 419 RIRRFVGV 426 (428)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99998764
No 77
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.92 E-value=4.2e-24 Score=180.39 Aligned_cols=218 Identities=18% Similarity=0.196 Sum_probs=156.7
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE--E
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV--I 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~--~ 87 (242)
|+++ +...+.++++|++.+++|++|. +.+.+.+++|+++|++||+++|+||+|.++...+....+..+.-..+++ +
T Consensus 153 d~~~l~~~l~~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s 231 (385)
T 1b5p_A 153 DPERVRRAITPRTKALVVNSPNNPTGA-VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNG 231 (385)
T ss_dssp CHHHHHTTCCTTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEE
T ss_pred CHHHHHHhcCCCCEEEEEeCCCCCCCC-CcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEe
Confidence 4555 4444557888888888999995 5577889999999999999999999998764433211222221112232 3
Q ss_pred eecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH---HHh--ccHHHHHHHHHHHHHHHHHhh
Q psy6548 88 LGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV---ILE--ENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 88 ~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~---~~~--~~~~~~~~~~~~~l~~~l~~~ 161 (242)
+||.++ +| +|+||+++++++++.+.+....++++.+.+++.++.++++. ... ++..+.++++++.+.+.| ++
T Consensus 232 ~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~ 309 (385)
T 1b5p_A 232 AAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGL-TA 309 (385)
T ss_dssp STTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred chhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 889998 88 99999999998888776543445567788888887777753 222 345677888888899999 55
Q ss_pred cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 162 LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
++ +....+..+++.|+.++..+.+..++.++|.++||.+.++. ++++|+++. .+++++++++++|+++++
T Consensus 310 ~g--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 310 LG--LKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp HT--CCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred CC--CeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 53 22223445677888876322467889999999999998762 579999954 799999999999887654
No 78
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=5.5e-24 Score=182.18 Aligned_cols=221 Identities=14% Similarity=0.138 Sum_probs=161.0
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCCCCCCEE--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYEDVRPDIV-- 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~~-- 86 (242)
|+++ +...+.++++++++.++|++|. .++.+.+++|+++|++||+++|+||+|.+|++.+..+ ....++..++++
T Consensus 180 d~~~l~~~l~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~ 258 (427)
T 3dyd_A 180 DLKQLEYLIDEKTACLIVNNPSNPCGS-VFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSC 258 (427)
T ss_dssp CHHHHHSSCCTTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEE
T ss_pred CHHHHHHHhccCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEE
Confidence 5666 4444557888888888999995 5677889999999999999999999999887666432 233334444555
Q ss_pred -Eeecccc-CCccchheeEeC-------hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Q psy6548 87 -ILGKALS-GGLYPISAVLAD-------DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIF 154 (242)
Q Consensus 87 -~~sK~~~-~g~~~~g~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l 154 (242)
++||.|+ +| +|+||++++ +++++.+.... ..+++.+++++.++.++++.... ++..++++++++.+
T Consensus 259 ~S~sK~~~~~G-~riG~~~~~~~~~~~~~~i~~~l~~~~-~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l 336 (427)
T 3dyd_A 259 GGLAKRWLVPG-WRLGWILIHDRRDIFGNEIRDGLVKLS-QRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLC 336 (427)
T ss_dssp EESTTTSSCGG-GCCEEEEEECSTTSSHHHHHHHHHHHH-HHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCcC-cceEEEEecCcchhhHHHHHHHHHHHH-hccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 5899987 78 999999887 35665554321 12567888888888888774211 34567788888888
Q ss_pred HHHHHhhcCCCCCCeEeeeceeEEEEecCC----chhHHHHHHHHH-HCCceeccC----CCCEEEEeccCcCCHHHHHH
Q psy6548 155 RSELRSRLSPDIVPVVRGKGLLNAIVLDKS----ILEVYDVCIKMK-DAGLVTKPI----SNNIIRLSPALNITEQELRE 225 (242)
Q Consensus 155 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~-~~gi~~~~~----~~~~lR~~~~~~~t~e~i~~ 225 (242)
.+.| +.++. +....+..++++|+.++.. ..+..+++++|. ++||.+.++ .++++|+++ ..+++++++
T Consensus 337 ~~~L-~~~~g-~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~--~~~~e~i~~ 412 (427)
T 3dyd_A 337 YGAL-AAIPG-LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI--TVPEVMMLE 412 (427)
T ss_dssp HHHH-HHSTT-EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES--CSCHHHHHH
T ss_pred HHHH-hcCCC-ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE--CCCHHHHHH
Confidence 8888 66532 2112245577888887631 134678888886 789999876 368999995 479999999
Q ss_pred HHHHHHHHHHHHh
Q psy6548 226 GLDIIINTINTMA 238 (242)
Q Consensus 226 ~~~~l~~~l~~~~ 238 (242)
++++|+++++++.
T Consensus 413 ~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 413 ACSRIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
No 79
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.92 E-value=3.6e-24 Score=181.35 Aligned_cols=216 Identities=16% Similarity=0.177 Sum_probs=155.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHh------hCCEEEEeccccccCccCccc--ccccCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ------YNVLFIADEVQTGLGRTGKLL--AIHYEDV 81 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~------~~~~li~De~~~~~~~~g~~~--~~~~~~~ 81 (242)
|+++ +...+.+++++++++++|++|.+ .+.+.+++|+++|++ ||+++|+||+|+++...+... .....+.
T Consensus 161 d~~~l~~~l~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 239 (398)
T 3ele_A 161 DFDALEERINAHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDN 239 (398)
T ss_dssp CHHHHHHTCCTTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSS
T ss_pred CHHHHHHHhCcCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCC
Confidence 5666 44445689999999999999964 566779999999999 999999999999876555322 1122222
Q ss_pred CCCEEEeecccc-CCccchheeEeChhhhh------ccCCC-CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q psy6548 82 RPDIVILGKALS-GGLYPISAVLADDEVMG------TLVPG-THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI 153 (242)
Q Consensus 82 ~~~~~~~sK~~~-~g~~~~g~~~~~~~~~~------~l~~~-~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~ 153 (242)
...+.++||+++ +| +|+||+++++++++ .+... ....+++.+++++.++.+.++ .....+++++++++
T Consensus 240 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~ 315 (398)
T 3ele_A 240 TLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG---ATGDINAYKENRDL 315 (398)
T ss_dssp EEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT---CCCCHHHHHHHHHH
T ss_pred eEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 222334889999 99 99999999877543 22111 112344566677666554443 44457888999999
Q ss_pred HHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC----CCEEEEeccCcCCHHHHHHHHHH
Q psy6548 154 FRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQELREGLDI 229 (242)
Q Consensus 154 l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~ 229 (242)
+++.| +.++ +....+..++++|+.++.. +..++.+.|.++||.+.++. ++++|++++ .+++++++++++
T Consensus 316 l~~~L-~~~g--~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~ 388 (398)
T 3ele_A 316 LYEGL-TRIG--YHCFKPDGAFYMFVKALED--DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPA 388 (398)
T ss_dssp HHHHH-HHHT--CCEECCSBSSEEEEECSSS--CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHH
T ss_pred HHHHH-HHcC--CeecCCCeeEEEEEEcCCC--CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHH
Confidence 99999 6654 2222234567789988763 67889999999999998763 689999964 799999999999
Q ss_pred HHHHHHHHh
Q psy6548 230 IINTINTMA 238 (242)
Q Consensus 230 l~~~l~~~~ 238 (242)
|+++++++.
T Consensus 389 l~~~l~~~~ 397 (398)
T 3ele_A 389 FEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999998753
No 80
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=3.4e-24 Score=179.61 Aligned_cols=211 Identities=12% Similarity=0.086 Sum_probs=157.1
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh--CCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~--~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
|+++ +.+.++++++|++++++|++|.+. +.+.+++|+++|++| |+++|+||+|++|+..+........+....+.
T Consensus 145 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~ 223 (367)
T 3euc_A 145 DRGAMLAAMAEHQPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMR 223 (367)
T ss_dssp CHHHHHHHHHHHCCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEE
T ss_pred CHHHHHHHhhccCCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEe
Confidence 5666 334444788999999999999654 667899999999999 99999999998875333222223333333445
Q ss_pred EeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCC
Q psy6548 87 ILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPD 165 (242)
Q Consensus 87 ~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~ 165 (242)
++||+..+| +|+||+++++++++.+... ..+++.+++++.++.++++.... ++..++++++++++.+.| +.++.
T Consensus 224 s~sK~~~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~~~~g- 298 (367)
T 3euc_A 224 TVSKLGLAG-IRLGYVAGDPQWLEQLDKV--RPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGM-AAHGG- 298 (367)
T ss_dssp ECCCTTSCS-CCEEEEEECHHHHHHHGGG--CCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-HTSTT-
T ss_pred cchhhcccc-cCceeeeeCHHHHHHHHHh--CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HhCCC-
Confidence 589993388 8999999999998888763 34567889999888888775221 446677888888888888 66632
Q ss_pred CCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC------CCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 166 IVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS------NNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
+ ...+..+.++++.++ +..++.+.|.++||.+.++. .+++|++++ ++++++++++.|+++++
T Consensus 299 ~-~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 299 V-TVFPSAANFLLARVP----DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp C-EECCCSSSEEEEECS----CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred c-EECCCCCeEEEEECC----CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 2 233456778888876 36788999999999998753 589999943 99999999999988753
No 81
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.91 E-value=1.3e-23 Score=178.94 Aligned_cols=223 Identities=12% Similarity=0.046 Sum_probs=159.7
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccc--cccCCCCCCEEE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA--IHYEDVRPDIVI 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~--~~~~~~~~~~~~ 87 (242)
|+++ + .+++++++++++++|++|. +.+.+.+++|+++|++||+++|+||+|..+........ ....+....+.+
T Consensus 171 d~~~l~--~~~~~~~v~~~~p~NptG~-~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s 247 (417)
T 3g7q_A 171 DFEHLH--IGEETGMICVSRPTNPTGN-VITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMS 247 (417)
T ss_dssp CGGGCC--CCTTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEE
T ss_pred CHHHhc--cccCceEEEECCCCCCCCC-ccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEe
Confidence 4454 4 4567999999999999995 55667799999999999999999999964311110000 011111122445
Q ss_pred eeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHhhc
Q psy6548 88 LGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-----ENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 88 ~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-----~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+||..++| +|+||+++++++++.+.......+++.+++++.++.+.++...- +.+.+.++++++.+++.|++.+
T Consensus 248 ~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 326 (417)
T 3g7q_A 248 LSKLGLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYL 326 (417)
T ss_dssp SGGGTCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHC
T ss_pred chhccCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89964588 99999999999998887655566677788888877776653211 1245566778888888884445
Q ss_pred CC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-------------CCEEEEeccCcCCHHHHHHHHH
Q psy6548 163 SP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-------------NNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 163 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------------~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
+. .+....+..|+++|+.++....+..++.+.|.++||.+.++. .+++|++++. ++++++++++
T Consensus 327 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~ 404 (417)
T 3g7q_A 327 SEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVK 404 (417)
T ss_dssp CTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHH
T ss_pred ccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHH
Confidence 53 222233456889999988622578899999999999998641 4689999764 9999999999
Q ss_pred HHHHHHHHHhh
Q psy6548 229 IIINTINTMAA 239 (242)
Q Consensus 229 ~l~~~l~~~~~ 239 (242)
+|+++++++.+
T Consensus 405 ~l~~~l~~~~~ 415 (417)
T 3g7q_A 405 ILAEEIERAWR 415 (417)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988654
No 82
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=8.9e-23 Score=171.72 Aligned_cols=219 Identities=15% Similarity=0.142 Sum_probs=163.6
Q ss_pred CChhh--hcCC-CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~-~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+. ++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+.+. .. ..... ...|++
T Consensus 132 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~-~~--~~~~~--~~~di~ 202 (386)
T 2dr1_A 132 VKPEDLDDALRKNPDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAMGG-AD--IKFDK--WGLDVV 202 (386)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTBTT-BC--CCTTT--TTCSEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEccccccC-cc--ccccc--cCCcEE
Confidence 45666 3443 467899999999999998765 8999999999999999999997331 11 12222 245777
Q ss_pred Eee--ccccCCccchheeEeChhhhhccCCC------------------CCCCCCCCCHHHHHHHHHHHHHHHhc----c
Q psy6548 87 ILG--KALSGGLYPISAVLADDEVMGTLVPG------------------THGSTYGGNPLACKLAMTALDVILEE----N 142 (242)
Q Consensus 87 ~~s--K~~~~g~~~~g~~~~~~~~~~~l~~~------------------~~~~~~~~~~~~~~~a~a~l~~~~~~----~ 142 (242)
++| |+++++ .++|++++++++++.+.+. ....+++.++++++++.++++.+... +
T Consensus 203 ~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~ 281 (386)
T 2dr1_A 203 FSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEK 281 (386)
T ss_dssp EEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred EEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 755 999976 5689999999888776431 01334567788888888888876543 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCe-EeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----CCCEEEEeccCc
Q psy6548 143 MIENAYKMGEIFRSELRSRLSPDIVPV-VRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPALN 217 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lR~~~~~~ 217 (242)
+.++++++++++++.| +.++-..... ....+.++++.++.. .+..++.++|.++||.+.++ ..+.+|++++..
T Consensus 282 ~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~ 359 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGV-REIGLDILAEPGHESPTITAVLTPPG-IKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGY 359 (386)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCCBSSCTTCBCSSEEEEECCTT-CCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHH-HHcCCeeCcCccccCCceEEEEcCCC-CCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCC
Confidence 6788889999999999 6553211111 011467888888743 46788999999999999875 357999998888
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 218 ITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 218 ~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
++++++++++++|+++++++..+
T Consensus 360 ~~~~~i~~~~~~l~~~~~~~~~~ 382 (386)
T 2dr1_A 360 MKFEDIQEMLDNLREVINELKKQ 382 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCC
Confidence 89999999999999999887544
No 83
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=1.5e-23 Score=175.25 Aligned_cols=207 Identities=15% Similarity=0.143 Sum_probs=150.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccc-ccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAI-HYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~ 88 (242)
|+++ +...+ +++++++++++|++|.+ .+.+++++++++|+ ||+++|+||+|.+++........ +.++....+.++
T Consensus 136 d~~~l~~~i~-~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~ 212 (356)
T 1fg7_A 136 DLQGISDKLD-GVKVVYVCSPNNPTGQL-INPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTL 212 (356)
T ss_dssp CHHHHHTSCT-TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEES
T ss_pred CHHHHHHHhc-CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecc
Confidence 4565 33334 88999999999999955 56788999999999 99999999999887532111111 212222223448
Q ss_pred ecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHhhcCC
Q psy6548 89 GKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---EENMIENAYKMGEIFRSELRSRLSP 164 (242)
Q Consensus 89 sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~---~~~~~~~~~~~~~~l~~~l~~~l~~ 164 (242)
||+++ +| +|+||+++++++++.+.+ ...+++.|++++.++.++++... -++..++++++++++.+.| ++++.
T Consensus 213 sK~~g~~G-~r~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~ 288 (356)
T 1fg7_A 213 SKAFALAG-LRCGFTLANEEVINLLMK--VIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAAL-KEIPC 288 (356)
T ss_dssp SSTTCCGG-GCCEEEEECHHHHHHHHH--HSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHH-HHSTT
T ss_pred hHhhcCch-hhhEEEEeCHHHHHHHHH--hcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 99998 89 999999999998887765 23455788888888888876432 2345677778888888888 66542
Q ss_pred CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc-CC----CCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 165 DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP-IS----NNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-~~----~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
+....++.++++|+.++ +..++.+.|.++||.+++ +. ++++|++++ +++++++++++|++
T Consensus 289 -~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 289 -VEQVFDSETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp -EEEECCCSSSEEEEEET----THHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred -ceEECCCCCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 11222446788898886 357899999999999998 42 368999954 78999999998865
No 84
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.91 E-value=1.1e-23 Score=178.29 Aligned_cols=222 Identities=15% Similarity=0.232 Sum_probs=164.5
Q ss_pred ccccCCCChhh--hcCCCC---CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccccc--CccCccccc
Q psy6548 4 QFPVKSKQVPA--KLKSNP---NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRTGKLLAI 76 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~~---~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~--~~~g~~~~~ 76 (242)
++.+|+.|+++ +.+.+. ++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+.+ +..+... .
T Consensus 151 ~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~-~ 225 (398)
T 3a2b_A 151 VIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGT-A 225 (398)
T ss_dssp EEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH-H
T ss_pred eEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCCcccccCCCCCch-H
Confidence 45677788887 444332 7899999999999997775 999999999999999999999643 3333322 2
Q ss_pred ccCCCC--CCEE--EeeccccCCccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHH
Q psy6548 77 HYEDVR--PDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE-ENMIENAYK 149 (242)
Q Consensus 77 ~~~~~~--~~~~--~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~ 149 (242)
..++.. +|++ ++||+++. .+ ||+++++++++.+.+.. ...+...++..++++.++++..+. ++..+++++
T Consensus 226 ~~~~~~~~~di~~~s~sK~~~~--~G-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~ 302 (398)
T 3a2b_A 226 SHFGLNDDVDLIMGTFSKSLAS--LG-GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWK 302 (398)
T ss_dssp HHHTCGGGCSEEEEESSSTTCS--SC-EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred hhcCCCcCCeEEEecccccccC--CC-cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 233432 4677 58899983 12 88999998888776521 233444556555566677776543 467888999
Q ss_pred HHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-------CCEEEEeccCcCCHHH
Q psy6548 150 MGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-------NNIIRLSPALNITEQE 222 (242)
Q Consensus 150 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~lR~~~~~~~t~e~ 222 (242)
+++++++.| ++++-.. ..+.|+++|+.++.. .+..++.+.|.++||.+.++. .+++|++++..+++++
T Consensus 303 ~~~~l~~~L-~~~g~~~---~~~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~ 377 (398)
T 3a2b_A 303 NTDYAKAQL-LDHGFDL---GATESPILPIFIRSN-EKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQ 377 (398)
T ss_dssp HHHHHHHHH-HHTTCCB---CSCCSSEEEEECCCH-HHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHH
T ss_pred HHHHHHHHH-HhcCCCc---CCCCCCEEEEEcCCH-HHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHH
Confidence 999999999 6654211 123478899988754 567889999999999998752 4789999888889999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6548 223 LREGLDIIINTINTMA 238 (242)
Q Consensus 223 i~~~~~~l~~~l~~~~ 238 (242)
+++++++|+++++++.
T Consensus 378 i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 378 IDEAIEKMVKVFKQAE 393 (398)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999988753
No 85
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.91 E-value=3.4e-24 Score=183.35 Aligned_cols=225 Identities=17% Similarity=0.114 Sum_probs=160.4
Q ss_pred Chhh--hcCCCCCEEEEEEcc-cccCCCcccCCHHHHHHHHHHH-HhhCCEEEEeccccccCccCcc--c-c-cc-----
Q psy6548 11 QVPA--KLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALC-SQYNVLFIADEVQTGLGRTGKL--L-A-IH----- 77 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~-~~~~~G~~~~~~~~l~~l~~l~-~~~~~~li~De~~~~~~~~g~~--~-~-~~----- 77 (242)
|+++ +.+.++++++|+++| ++|++|. +.+.+.+++|+++| ++||+++|+||+|.++...+.. . . ..
T Consensus 168 d~~~l~~~l~~~~~~~v~~~p~~~NPtG~-~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
T 3ppl_A 168 DMDAVEELVKNPQVKGMWVVPVFSNPTGF-TVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA 246 (427)
T ss_dssp CHHHHHHHTTSTTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT
T ss_pred CHHHHHHHHhcCCCeEEEECCCCCCCCCc-cCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhcc
Confidence 5555 445467899999885 7888885 44567799999999 9999999999999874333221 1 1 11
Q ss_pred -cCCCCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHH
Q psy6548 78 -YEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI---LE--ENMIENAYKMG 151 (242)
Q Consensus 78 -~~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~---~~--~~~~~~~~~~~ 151 (242)
..+....+.+|||++++| +|+||+++++++++.+.......+++.+++.+.++.++++.. .. +...+.+++++
T Consensus 247 ~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (427)
T 3ppl_A 247 GNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKF 325 (427)
T ss_dssp TCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEechhhccCcC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Confidence 222223344599997789 999999999999888876545556778888888777666531 11 23445566666
Q ss_pred HHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEeccCcCC
Q psy6548 152 EIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPALNIT 219 (242)
Q Consensus 152 ~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~~~~t 219 (242)
+.+.+.|.+.++. ......+..|+++|+.++.. +..++.+.|.++||.+.++ +.+++|+++... +
T Consensus 326 ~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~ 402 (427)
T 3ppl_A 326 NKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-P 402 (427)
T ss_dssp HHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-C
T ss_pred HHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-C
Confidence 7777777443432 12122344688999999874 5788899999999999882 368999998655 8
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q psy6548 220 EQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 220 ~e~i~~~~~~l~~~l~~~~~~ 240 (242)
++++++++++|+++++++..+
T Consensus 403 ~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 403 VEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999886543
No 86
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.91 E-value=1.6e-24 Score=182.39 Aligned_cols=218 Identities=13% Similarity=0.115 Sum_probs=157.4
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccC-----CCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYE-----DVRP 83 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~-----~~~~ 83 (242)
|+++ +...+++++++++++++|++|. ..+.+.+++|+++|++||+++|+||+|+++...|... ..... +...
T Consensus 145 d~~~l~~~l~~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i 223 (383)
T 3kax_A 145 DFEHLEKQFQQGVKLMLLCSPHNPIGR-VWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTI 223 (383)
T ss_dssp CHHHHHHHHTTTCCEEEEESSBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEE
T ss_pred cHHHHHHHhCcCCeEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEE
Confidence 5666 3323678889999999999995 5567789999999999999999999998876655321 11111 1112
Q ss_pred CEEEeecccc-CCccchheeEe-ChhhhhccCCCCCC-CCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHH
Q psy6548 84 DIVILGKALS-GGLYPISAVLA-DDEVMGTLVPGTHG-STYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 84 ~~~~~sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~~l 158 (242)
.+.++||+++ +| +|+||+++ ++++++.+...... .+++.+++++.++.++++... .++..++++++++++++.|
T Consensus 224 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 302 (383)
T 3kax_A 224 TCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYI 302 (383)
T ss_dssp EEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334889999 89 89999988 57888777654333 234678888888887776422 1345677888888898988
Q ss_pred Hhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 159 RSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 159 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
++ ++. +....+..+++.|+.++..+.+..++.+.|. ++||.+.++ +.+++|++++ .+++++++++++|
T Consensus 303 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l 378 (383)
T 3kax_A 303 -KDHIPT-LSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRL 378 (383)
T ss_dssp -HHHCTT-CEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHH
T ss_pred -HhhCCC-ceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHH
Confidence 55 442 2222234456777888763246889999998 689999874 3589999965 5899999999999
Q ss_pred HHHH
Q psy6548 231 INTI 234 (242)
Q Consensus 231 ~~~l 234 (242)
++++
T Consensus 379 ~~~l 382 (383)
T 3kax_A 379 RHTF 382 (383)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 87
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.91 E-value=2.2e-24 Score=182.02 Aligned_cols=215 Identities=12% Similarity=0.116 Sum_probs=155.0
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccc----cCCCCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIH----YEDVRPD 84 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~----~~~~~~~ 84 (242)
|+++ +...++++++|++++++|++|.+ .+.+++++|+++|++||+++|+||+|+++...|... .+. ..+....
T Consensus 152 d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~ 230 (386)
T 1u08_A 152 DWQEFAALLSERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVA 230 (386)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEE
T ss_pred CHHHHHHhhcccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEE
Confidence 5566 33335689999999999999955 567899999999999999999999998875544311 111 1222233
Q ss_pred EEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhh
Q psy6548 85 IVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 85 ~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~ 161 (242)
+.++||+++ +| +|+||+++++++++.+.+.....+++.+++++.++.++++.... ++..++++++++++.+.| ++
T Consensus 231 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~ 308 (386)
T 1u08_A 231 VSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNAL-NE 308 (386)
T ss_dssp EEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHT-TS
T ss_pred EecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 445889999 88 89999999999888877544445677788888887777775321 345677777788888777 55
Q ss_pred cCCCCCCeEeeeceeEEEEecCCc-hhHHHHHHHHH-HCCceeccC--------CCCEEEEeccCcCCHHHHHHHHHHHH
Q psy6548 162 LSPDIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMK-DAGLVTKPI--------SNNIIRLSPALNITEQELREGLDIII 231 (242)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l~ 231 (242)
++ +....+..++++|+.++... .+..++.++|. ++||.+.++ +++++|++++ .+++++++++++|+
T Consensus 309 ~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~~~~~~l~ 384 (386)
T 1u08_A 309 SR--LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLLAAAERLR 384 (386)
T ss_dssp SS--CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHHHHHHHHT
T ss_pred CC--CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHHHHHHHHh
Confidence 43 22122334788999887521 24678888887 689999764 3578999965 58999999999885
Q ss_pred H
Q psy6548 232 N 232 (242)
Q Consensus 232 ~ 232 (242)
+
T Consensus 385 ~ 385 (386)
T 1u08_A 385 Q 385 (386)
T ss_dssp T
T ss_pred h
Confidence 4
No 88
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.91 E-value=4.5e-24 Score=182.75 Aligned_cols=221 Identities=10% Similarity=0.021 Sum_probs=155.3
Q ss_pred ccccCCCChhh--hcC-CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-
Q psy6548 4 QFPVKSKQVPA--KLK-SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE- 79 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~-~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~- 79 (242)
+..+|+++.+. ..+ ..++++++++++++|++|. +++.+.+++|+++|++||+++|+||+|.++...+........
T Consensus 178 ~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~-~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 256 (432)
T 3ei9_A 178 IEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA-AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIP 256 (432)
T ss_dssp CEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGST
T ss_pred eEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcC
Confidence 45556654322 112 2457888888899999995 567788999999999999999999999887544332222222
Q ss_pred CC---CCCEEEeecccc-CCccchheeEeChhh--------hhccCCCCCCCCCCCCHHHHHHHHHHHHH-HH--hccHH
Q psy6548 80 DV---RPDIVILGKALS-GGLYPISAVLADDEV--------MGTLVPGTHGSTYGGNPLACKLAMTALDV-IL--EENMI 144 (242)
Q Consensus 80 ~~---~~~~~~~sK~~~-~g~~~~g~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~a~a~l~~-~~--~~~~~ 144 (242)
+. ...+.++||+|+ +| +|+||+++++++ ++.+.........+.+++++.++.++++. .. .++..
T Consensus 257 ~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 335 (432)
T 3ei9_A 257 GAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVI 335 (432)
T ss_dssp TGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHH
T ss_pred CCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHH
Confidence 11 122344899999 89 999999998877 44444322233445788888887777642 11 14567
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC------CCCEEEEeccCc
Q psy6548 145 ENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI------SNNIIRLSPALN 217 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~------~~~~lR~~~~~~ 217 (242)
++++++++++++.| ++++ +....+..++++|+.++. .+..++.+.|+++ ||.+.|+ +.+++|++ +.
T Consensus 336 ~~~~~~~~~l~~~L-~~~g--~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~ 408 (432)
T 3ei9_A 336 GFYKENTNIIIDTF-TSLG--YDVYGGKNAPYVWVHFPN--QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AF 408 (432)
T ss_dssp HHHHHHHHHHHHHH-HHTT--CCEEECSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CC
T ss_pred HHHHHHHHHHHHHH-HHCC--ceecCCCcceEEEEECCC--CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ec
Confidence 88888999999999 6653 222223467889999884 4677888888765 9999864 46899999 56
Q ss_pred CCHHHHHHHHHHHHHH
Q psy6548 218 ITEQELREGLDIIINT 233 (242)
Q Consensus 218 ~t~e~i~~~~~~l~~~ 233 (242)
.+++++++++++|++.
T Consensus 409 ~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 409 GHRENILEACRRFKQL 424 (432)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 7999999999999764
No 89
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.91 E-value=2.8e-24 Score=183.93 Aligned_cols=211 Identities=12% Similarity=0.130 Sum_probs=156.9
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHh-----hCCEEEEeccccccCccCccc-cc--ccCCCCCC------EE
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-----YNVLFIADEVQTGLGRTGKLL-AI--HYEDVRPD------IV 86 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~-----~~~~li~De~~~~~~~~g~~~-~~--~~~~~~~~------~~ 86 (242)
++++++++.++|++|. .++.+++++|+++|++ ||+++|+||+|+++...+... .. ...+..++ +.
T Consensus 189 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (430)
T 2x5f_A 189 DKVIMILNYPNNPTGY-TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLD 267 (430)
T ss_dssp SEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEE
T ss_pred CCEEEEEcCCCCCCCC-cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEE
Confidence 7888887777999995 5677899999999999 999999999998875554311 11 11122333 33
Q ss_pred Eeecccc-CCccchheeEe---ChhhhhccCCCCCC----CCCCCCHHHHHHHHHHHH-HH---Hh-ccHHHHHHHHHHH
Q psy6548 87 ILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG----STYGGNPLACKLAMTALD-VI---LE-ENMIENAYKMGEI 153 (242)
Q Consensus 87 ~~sK~~~-~g~~~~g~~~~---~~~~~~~l~~~~~~----~~~~~~~~~~~~a~a~l~-~~---~~-~~~~~~~~~~~~~ 153 (242)
++||+++ +| +|+||+++ ++++++.+...... .+++.+++++.++.++++ .. +. +...+.++++++.
T Consensus 268 s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 346 (430)
T 2x5f_A 268 GATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEV 346 (430)
T ss_dssp EHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHH
Confidence 4889998 88 89999999 98888877653333 567788999988888887 32 21 2356777778888
Q ss_pred HHHHHHhhc--CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHH-CCceeccCCCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 154 FRSELRSRL--SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPISNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 154 l~~~l~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
+.+.| ++. ..++....+..++++|+.++ . .+..++.+.|.+ +||.+.+++.+++|++++. .+++++++++++|
T Consensus 347 l~~~L-~~~~~~~g~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l 422 (430)
T 2x5f_A 347 TKEVV-YADQYHSHWQAYDFNSGYFMAIKVH-D-VDPEALRKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSI 422 (430)
T ss_dssp HHHHH-TCGGGTTTEEECCCCBSSEEEEEES-S-SCHHHHHHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHH
T ss_pred HHHHH-HhhCCCCCceeeCCCceEEEEeCCC-C-CCHHHHHHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHH
Confidence 88888 421 11121112334677899987 3 467889999998 9999999877899999875 4899999999999
Q ss_pred HHHHHHH
Q psy6548 231 INTINTM 237 (242)
Q Consensus 231 ~~~l~~~ 237 (242)
+++++++
T Consensus 423 ~~~l~~~ 429 (430)
T 2x5f_A 423 AKAIDDL 429 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998765
No 90
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=1.1e-23 Score=175.57 Aligned_cols=218 Identities=16% Similarity=0.104 Sum_probs=159.9
Q ss_pred ccccCCC-----Chhh--hcCCC-CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-
Q psy6548 4 QFPVKSK-----QVPA--KLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL- 74 (242)
Q Consensus 4 ~~~~~~~-----d~~~--~~~~~-~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~- 74 (242)
+..+|++ |+++ +.+.+ +++++|++++++|++|.+. +.+.+++|+++| +||+++|+||+|.++...+...
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~ 193 (354)
T 3ly1_A 116 VTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT-PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRS 193 (354)
T ss_dssp EEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC-CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCC
T ss_pred EEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCC
Confidence 4556766 6777 44443 6899999999999999655 556688888887 7999999999998876554311
Q ss_pred cc---ccC-CCCCCEEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHH
Q psy6548 75 AI---HYE-DVRPDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAY 148 (242)
Q Consensus 75 ~~---~~~-~~~~~~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~ 148 (242)
.. ... +....+.++||+++ +| +|+||+++++++++.+..... .++.+++++.++.++++.... ++..++++
T Consensus 194 ~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 270 (354)
T 3ly1_A 194 ISPMITQGAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVA--GEKINFSGVDAALASMNDSAFITYSKKSND 270 (354)
T ss_dssp SHHHHHTTCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTT--CSCCCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhhhcCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 11 111 22222334889998 88 999999999999988876433 367888888888887764321 34567788
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceec---cCCCCEEEEeccCcCCHHHHHH
Q psy6548 149 KMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTK---PISNNIIRLSPALNITEQELRE 225 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~---~~~~~~lR~~~~~~~t~e~i~~ 225 (242)
++++++++.| +.++ + ...++.+.++|+.++. +..++.+.|.++||.+. +..++++|++++ +++++++
T Consensus 271 ~~~~~l~~~l-~~~~--~-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i~~ 340 (354)
T 3ly1_A 271 VSRQILLKAL-EDLK--L-PYLPSEGNFVFHQLVV---PLKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEMQW 340 (354)
T ss_dssp HHHHHHHHHH-HHHT--C-CBCCCCSSEEEEECSS---CHHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHHHH
T ss_pred HHHHHHHHHH-HHCC--C-eECCCCceEEEEECCC---CHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHHHH
Confidence 8888888888 6553 1 1224467788888875 46789999999999988 124689999943 8999999
Q ss_pred HHHHHHHHHHH
Q psy6548 226 GLDIIINTINT 236 (242)
Q Consensus 226 ~~~~l~~~l~~ 236 (242)
++++|++++++
T Consensus 341 ~~~~l~~~l~~ 351 (354)
T 3ly1_A 341 VADTMREFRKK 351 (354)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 91
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.91 E-value=9.8e-24 Score=181.23 Aligned_cols=226 Identities=14% Similarity=0.129 Sum_probs=160.8
Q ss_pred Chhh-hcC---CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc--ccccccCCCCCC
Q psy6548 11 QVPA-KLK---SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK--LLAIHYEDVRPD 84 (242)
Q Consensus 11 d~~~-~~~---~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~ 84 (242)
|+++ +.. .++++++|+++.++|++|. +.+.+.+++|+++|++||+++|+||+|..+..... .......+....
T Consensus 192 d~~~l~~~l~~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~ 270 (444)
T 3if2_A 192 DFEALENLPALKEGRIGAICCSRPTNPTGN-VLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTIL 270 (444)
T ss_dssp CHHHHHTCHHHHTTCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEE
T ss_pred CHHHHHHHHHhcCCCceEEEeCCCCCCCCC-cCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEE
Confidence 5666 443 4678999999888999996 55667799999999999999999999964311100 000011122223
Q ss_pred EEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHH
Q psy6548 85 IVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-----ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 85 ~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-----~~~~~~~~~~~~~l~~~l~ 159 (242)
+.++||...+| +|+||+++++++++.+.......+++.+++.+.++.++++.... +...+.++++++.+++.|+
T Consensus 271 ~~S~sK~~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (444)
T 3if2_A 271 CFSLSKIGLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLK 349 (444)
T ss_dssp EEESTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EechhhccCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45589985588 99999999999988887655555667788888777766653221 1245566777788888884
Q ss_pred hhcCC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC--------------CCEEEEeccCcCCHHHHH
Q psy6548 160 SRLSP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--------------NNIIRLSPALNITEQELR 224 (242)
Q Consensus 160 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--------------~~~lR~~~~~~~t~e~i~ 224 (242)
+.++. .+....+..++++|+.++....+..++.+.|.++||.+.++. .+++|++++. ++++++
T Consensus 350 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~ 427 (444)
T 3if2_A 350 QALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLI 427 (444)
T ss_dssp HHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHH
T ss_pred HhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHH
Confidence 44543 112222456889999998622578889999999999998641 1589999775 999999
Q ss_pred HHHHHHHHHHHHHhhh
Q psy6548 225 EGLDIIINTINTMAAK 240 (242)
Q Consensus 225 ~~~~~l~~~l~~~~~~ 240 (242)
+++++|+++++++.+.
T Consensus 428 ~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 428 DGIKVIGEVVRELYDN 443 (444)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999887653
No 92
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.91 E-value=3.5e-24 Score=182.06 Aligned_cols=220 Identities=14% Similarity=0.106 Sum_probs=157.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCC-CEEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRP-DIVI- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~- 87 (242)
|+++ +...+.++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++...+.......++... ++++
T Consensus 163 d~~~l~~~l~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~ 241 (406)
T 1xi9_A 163 DIDDIRKKITDRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMN 241 (406)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEE
T ss_pred CHHHHHHhhCcCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEe
Confidence 5666 43334478999999999999964 567899999999999999999999998875432222222222112 3443
Q ss_pred -eecccc-CCccchheeE--eCh----hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Q psy6548 88 -LGKALS-GGLYPISAVL--ADD----EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 88 -~sK~~~-~g~~~~g~~~--~~~----~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~ 157 (242)
+||+++ +| +|+||++ +++ ++++.+....... ++.+++++.++.++++...+ +++.++++++++.+++.
T Consensus 242 s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 319 (406)
T 1xi9_A 242 GLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKR 319 (406)
T ss_dssp ESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCc-cEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 789998 78 8999998 888 8888776532222 56778888888777753221 34567788888888888
Q ss_pred HHhhcCCCCCCeEeeeceeEEEEecC--CchhHHHHHHHHH-HCCceeccCC------CCEEEEeccCcCCHHHHHHHHH
Q psy6548 158 LRSRLSPDIVPVVRGKGLLNAIVLDK--SILEVYDVCIKMK-DAGLVTKPIS------NNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~-~~gi~~~~~~------~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
| +.++. +....+..++++|+.++. . .+..++.+.|. ++||.+.++. .+++|++++ .++++++++++
T Consensus 320 L-~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~ 394 (406)
T 1xi9_A 320 L-NEIPG-ISTTKPQGAFYIFPKIEVGPW-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMD 394 (406)
T ss_dssp H-HTSTT-EECCCCCBSSEECCEECSCSC-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHH
T ss_pred H-HhCCC-CeeecCCeeEEEEEecCccCC-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHH
Confidence 8 66532 111122346677777764 2 46788999997 8899998752 678999976 89999999999
Q ss_pred HHHHHHHHHh
Q psy6548 229 IIINTINTMA 238 (242)
Q Consensus 229 ~l~~~l~~~~ 238 (242)
+|+++++++.
T Consensus 395 ~l~~~l~~~~ 404 (406)
T 1xi9_A 395 RFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 93
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=6.1e-24 Score=181.56 Aligned_cols=224 Identities=15% Similarity=0.086 Sum_probs=158.4
Q ss_pred Chhh--hcCCCCCEEEEEE-cccccCCCcccCCHHHHHHHHHHHH-hhCCEEEEeccccc--cCccCccc-cc-------
Q psy6548 11 QVPA--KLKSNPNICAFMV-EPIQGEAGAVVPDDGYLKKVRALCS-QYNVLFIADEVQTG--LGRTGKLL-AI------- 76 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~-e~~~~~~G~~~~~~~~l~~l~~l~~-~~~~~li~De~~~~--~~~~g~~~-~~------- 76 (242)
|+++ +.+.++++++|++ ..++|++|. +.+.+++++|+++|+ +||+++|+||+|.+ |+..+... ..
T Consensus 166 d~~~l~~~l~~~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 244 (422)
T 3d6k_A 166 DMGVVRELVKDPQVKGMWTVPVFGNPTGV-TFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA 244 (422)
T ss_dssp CHHHHHHHHTSTTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT
T ss_pred CHHHHHHHHhcCCCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc
Confidence 4555 3444457888884 568888985 667889999999999 99999999999974 54333211 11
Q ss_pred ccCCCCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHH
Q psy6548 77 HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI---LE--ENMIENAYKMG 151 (242)
Q Consensus 77 ~~~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~---~~--~~~~~~~~~~~ 151 (242)
+..+....+.+|||+.++| +|+||+++++++++.+.......+++.+++++.++.++++.. .. +...+.+++++
T Consensus 245 ~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (422)
T 3d6k_A 245 GNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKF 323 (422)
T ss_dssp TCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 1122223344589996689 999999999999888876544556778889988887777531 11 22345556667
Q ss_pred HHHHHHHHhhcCC-C-CCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEeccCcCC
Q psy6548 152 EIFRSELRSRLSP-D-IVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPALNIT 219 (242)
Q Consensus 152 ~~l~~~l~~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~~~~t 219 (242)
+.+++.|++.++. + +....+..|+++|+.++.. +...+.+.|.++||.+.++ +.+++|++++. .+
T Consensus 324 ~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~ 400 (422)
T 3d6k_A 324 ERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PP 400 (422)
T ss_dssp HHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SC
T ss_pred HHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CC
Confidence 7777777433332 1 1112234678999999763 4677888999999999883 14789999776 79
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy6548 220 EQELREGLDIIINTINTMAA 239 (242)
Q Consensus 220 ~e~i~~~~~~l~~~l~~~~~ 239 (242)
++++++++++|+++++++..
T Consensus 401 ~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 401 VAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999887643
No 94
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.8e-24 Score=184.08 Aligned_cols=220 Identities=15% Similarity=0.149 Sum_probs=157.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcc-cccccCC--CCCC--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKL-LAIHYED--VRPD-- 84 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~--~~~~-- 84 (242)
|+++ +...++++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++...|.. ..+..+. ...+
T Consensus 149 d~~~l~~~l~~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~ 227 (411)
T 2o0r_A 149 DADALRRAVTPRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTIT 227 (411)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEE
T ss_pred CHHHHHHhhccCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEE
Confidence 5666 43334679999999999999955 56789999999999999999999999887554432 1121111 1223
Q ss_pred EEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhh
Q psy6548 85 IVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 85 ~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~ 161 (242)
+.++||+++ +| +|+||+++++++++.+.......+++.++++++++.++++.... ++..++++++++++++.| +.
T Consensus 228 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L-~~ 305 (411)
T 2o0r_A 228 ISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGL-TE 305 (411)
T ss_dssp EEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred EeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 344889998 89 89999999999888776543444566777888777777764322 346677888888888888 55
Q ss_pred cCCCCCCeEeeeceeEEEEecCCc-hhHHHHHHHHH-HCCceeccC-----------------CCCEEEEeccCcCCHHH
Q psy6548 162 LSPDIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMK-DAGLVTKPI-----------------SNNIIRLSPALNITEQE 222 (242)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~~~~~-----------------~~~~lR~~~~~~~t~e~ 222 (242)
++ +....+..++++|+.++... .+..++.++|. ++||.+.++ +.+++|+++. .++++
T Consensus 306 ~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~ 381 (411)
T 2o0r_A 306 IG--FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--KRDDT 381 (411)
T ss_dssp HT--CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--SCHHH
T ss_pred cC--CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--CCHHH
Confidence 53 22122345678899887520 24678888887 679999763 2468999964 58999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6548 223 LREGLDIIINTINTM 237 (242)
Q Consensus 223 i~~~~~~l~~~l~~~ 237 (242)
+++++++|++++++.
T Consensus 382 i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 382 LDEAIRRLSVLAERP 396 (411)
T ss_dssp HHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999877654
No 95
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.91 E-value=1e-23 Score=178.76 Aligned_cols=222 Identities=15% Similarity=0.189 Sum_probs=160.4
Q ss_pred cccccCCCChhh--hcCC---CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-c-cCccCcccc
Q psy6548 3 LQFPVKSKQVPA--KLKS---NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-G-LGRTGKLLA 75 (242)
Q Consensus 3 ~~~~~~~~d~~~--~~~~---~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~ 75 (242)
.+..+|++|+++ +.+. ++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ | +++.|.++.
T Consensus 155 ~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~ 230 (401)
T 2bwn_A 155 PKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA 230 (401)
T ss_dssp CEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH
T ss_pred eEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee
Confidence 356788888877 3332 257899999999999998776 8999999999999999999997 3 455554332
Q ss_pred cccCCC--CCCEE--EeeccccCCccchheeEeChhhhhccCCCCC--CCCCCCCHHHHHHHHHHHHHHHh---ccHHHH
Q psy6548 76 IHYEDV--RPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGTH--GSTYGGNPLACKLAMTALDVILE---ENMIEN 146 (242)
Q Consensus 76 ~~~~~~--~~~~~--~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~ 146 (242)
...++ .++++ ++||+++. +.||+++++++++.+..... ..+.+.++++++++.++++.++. +++.++
T Consensus 231 -~~~~~~~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 306 (401)
T 2bwn_A 231 -ERDGLMHRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDA 306 (401)
T ss_dssp -HHHTCGGGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred -eccCccccCcEEEeechhhccC---CCCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 22333 23444 58999992 23788888888777653211 12223466788888888887754 357788
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC-------CCCEEEEeccCcC
Q psy6548 147 AYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI-------SNNIIRLSPALNI 218 (242)
Q Consensus 147 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~-------~~~~lR~~~~~~~ 218 (242)
++++++++++.| ++++-... ...+.++++.++.. .+..++.+.|. ++||.+.++ +.+++|++++..+
T Consensus 307 ~~~~~~~l~~~L-~~~g~~~~---~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~ 381 (401)
T 2bwn_A 307 QQMHAKVLKMRL-KALGMPII---DHGSHIVPVVIGDP-VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVH 381 (401)
T ss_dssp HHHHHHHHHHHH-HHHTCCBC---CCSSSCEEEECCCH-HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTS
T ss_pred HHHHHHHHHHHH-HHCCCccc---CCCCCeEEEEeCCh-HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCC
Confidence 899999999999 65532111 22345788888653 56788999996 789999764 2358999999889
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy6548 219 TEQELREGLDIIINTINTM 237 (242)
Q Consensus 219 t~e~i~~~~~~l~~~l~~~ 237 (242)
+++++++++++|+++++++
T Consensus 382 t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 382 DLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887653
No 96
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.91 E-value=5e-24 Score=180.81 Aligned_cols=211 Identities=11% Similarity=0.064 Sum_probs=148.9
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc-ccccccCCCCCC----EEEeecccc-
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK-LLAIHYEDVRPD----IVILGKALS- 93 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~----~~~~sK~~~- 93 (242)
+++++|++++++|++|.+ ++.+++++|+++|++||+++|+||+|.+++..+. ......++..++ +.++||+++
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 240 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF 240 (400)
T ss_dssp CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTT
T ss_pred cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCC
Confidence 578888888899999955 5778999999999999999999999998755443 122222221123 344899998
Q ss_pred CCccchheeEeChhh-------hhccCCCCCCCCC-CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCC
Q psy6548 94 GGLYPISAVLADDEV-------MGTLVPGTHGSTY-GGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSPD 165 (242)
Q Consensus 94 ~g~~~~g~~~~~~~~-------~~~l~~~~~~~~~-~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 165 (242)
+| +|+||+++++++ ++.+.......++ +.+++++.++.++++....++..++++++++++++.| ++++
T Consensus 241 ~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~g-- 316 (400)
T 3asa_A 241 AG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKAL-LATG-- 316 (400)
T ss_dssp TT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH-HHTT--
T ss_pred cc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HHCC--
Confidence 89 999999998877 4433221122233 5788888888877775433567788899999999999 6553
Q ss_pred CCCeEeeeceeEEEE-ecCCchhHHHHHHHHHH-CCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 166 IVPVVRGKGLLNAIV-LDKSILEVYDVCIKMKD-AGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 166 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
+....+..++++|+. ++.. .+..++.+.|.+ +||.+.++ +++++|++ +..+++++++++++|++++++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 317 FEVFGGEHAPYLWVKPTQAN-ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp CEEEECSSSSEEEEECCCTT-CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCSCHHHHHHHHHHHHC-----
T ss_pred CeeeCCCCceEEEEeccCCC-CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeCCHHHHHHHHHHHHHHHHhh
Confidence 222222347888998 7643 345568888875 59999875 35789999 5789999999999999988764
Q ss_pred h
Q psy6548 238 A 238 (242)
Q Consensus 238 ~ 238 (242)
.
T Consensus 394 ~ 394 (400)
T 3asa_A 394 S 394 (400)
T ss_dssp -
T ss_pred h
Confidence 3
No 97
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=1.5e-23 Score=176.69 Aligned_cols=217 Identities=17% Similarity=0.253 Sum_probs=163.4
Q ss_pred ccccCCCChhh--hcCCCC--CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-c-CccCcccccc
Q psy6548 4 QFPVKSKQVPA--KLKSNP--NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-L-GRTGKLLAIH 77 (242)
Q Consensus 4 ~~~~~~~d~~~--~~~~~~--~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~-~~~g~~~~~~ 77 (242)
++.+|++|+++ +.+.+. +++++++++++|++|.+.+ +++|+++|++||+++|+||+|+. + ++.+.... .
T Consensus 147 ~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~ 221 (384)
T 1bs0_A 147 LRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSC-W 221 (384)
T ss_dssp EEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHH-H
T ss_pred EEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCcccceecCCCCchH-H
Confidence 56678888888 444332 4899999999999998776 89999999999999999999963 2 33333322 3
Q ss_pred cCCCCCCEE--EeeccccCCccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHH
Q psy6548 78 YEDVRPDIV--ILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILE---ENMIENAYKM 150 (242)
Q Consensus 78 ~~~~~~~~~--~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~ 150 (242)
.++..+|++ ++||+++ .+.||+++++++++.+.... ...+.+.+++.++++.++++.+.+ +++.++++++
T Consensus 222 ~~~~~~di~~~s~sK~~~---~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 298 (384)
T 1bs0_A 222 LQKVKPELLVVTFGKGFG---VSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAAL 298 (384)
T ss_dssp HTTCCCSEEEEESSSTTS---SCCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred hcCCCCcEEEeeccchhh---ccCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 445567877 5889998 23489999998888776521 222336788888888888887762 4577888889
Q ss_pred HHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-------CCEEEEeccCcCCHHHH
Q psy6548 151 GEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-------NNIIRLSPALNITEQEL 223 (242)
Q Consensus 151 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-------~~~lR~~~~~~~t~e~i 223 (242)
++++++.| ++++ +. ..++.+.++++.++.. .+..++.+.|.++||.+.++. .+++|++++..++++++
T Consensus 299 ~~~l~~~L-~~~g--~~-~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i 373 (384)
T 1bs0_A 299 ITRFRAGV-QDLP--FT-LADSCSAIQPLIVGDN-SRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDI 373 (384)
T ss_dssp HHHHHHHH-TTSS--CE-ECSCCSSBCCEEEESH-HHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHH
T ss_pred HHHHHHHH-HhcC--Cc-ccCCCCCEEEEEeCCH-HHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHH
Confidence 99999999 6653 11 1124567778888654 567889999999999998652 37899999988899999
Q ss_pred HHHHHHHHHH
Q psy6548 224 REGLDIIINT 233 (242)
Q Consensus 224 ~~~~~~l~~~ 233 (242)
++++++|+++
T Consensus 374 ~~~~~~l~~~ 383 (384)
T 1bs0_A 374 DRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999764
No 98
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.91 E-value=5.6e-23 Score=171.66 Aligned_cols=203 Identities=12% Similarity=0.099 Sum_probs=151.6
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE---Eeecccc-CCcc
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV---ILGKALS-GGLY 97 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~---~~sK~~~-~g~~ 97 (242)
+++++++.++|++|. +.+.+.+++|+++|++||+++|+||+|+++...+........+..++++ ++||.++ +| +
T Consensus 145 ~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~ 222 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGG-LINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPG-I 222 (361)
T ss_dssp CSEEEEETTBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGG-G
T ss_pred CCEEEEeCCCCCCCC-CCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCC-c
Confidence 888888888999995 5566789999999999999999999998775531111222223333433 4889999 88 8
Q ss_pred chheeE-eChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCC-eEeeec
Q psy6548 98 PISAVL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVP-VVRGKG 174 (242)
Q Consensus 98 ~~g~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~-~~~~~~ 174 (242)
|+||++ .++++++.+... ..+++.++++++++.++++..+. ++..++++++++++++.| +.++. .. ..++.+
T Consensus 223 r~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~--~~~~~~~~~ 297 (361)
T 3ftb_A 223 RFGYGITNNKEIAAKIKAK--QNPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEEL-NKIGF--IKRVFSPHA 297 (361)
T ss_dssp CCEEEEESCHHHHHHHHTT--SCTTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHH-HHSSS--EEEEECCSS
T ss_pred ceeEEEeCCHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HhCCC--CceecCCCC
Confidence 999988 888998888763 34567888988888877763211 345677778888888888 66542 22 344567
Q ss_pred eeEEEEecCCchhHHHHHHHHHHCCceeccC------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 175 LLNAIVLDKSILEVYDVCIKMKDAGLVTKPI------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.++++.++. .+..++.+.|.++||.+.++ +++++|++++ ++++++++++.|+++.+.
T Consensus 298 ~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 298 NFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp SEEEEEESS--SCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 788888876 36788999999999999875 2689999944 888889999888877653
No 99
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.90 E-value=3.6e-23 Score=174.42 Aligned_cols=218 Identities=14% Similarity=0.167 Sum_probs=159.5
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +.+.++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ ++ +..+....+ ..|++++
T Consensus 136 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~~~~~~~~--~~d~~~~ 206 (393)
T 3kgw_A 136 TLQEVEEGLAQHKPVLLFLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GVPIYMDQQ--GIDIMYS 206 (393)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TSCCCTTTT--TCCEEEE
T ss_pred CHHHHHHHHhhCCCcEEEEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--Ccccchhhc--CCCEEEe
Confidence 5555 3344448899999999999997776 8899999999999999999996 21 112222222 3567665
Q ss_pred --eccccCCccchheeEeChhhhhccCCCCC-----------------------CCCCCCCHHHHHHHHHHHHHHHh---
Q psy6548 89 --GKALSGGLYPISAVLADDEVMGTLVPGTH-----------------------GSTYGGNPLACKLAMTALDVILE--- 140 (242)
Q Consensus 89 --sK~~~~g~~~~g~~~~~~~~~~~l~~~~~-----------------------~~~~~~~~~~~~~a~a~l~~~~~--- 140 (242)
+|+++++ .++|++++++++++.+.+... ...++.+..+++++.++++.+..
T Consensus 207 s~sK~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 285 (393)
T 3kgw_A 207 SSQKVLNAP-PGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGL 285 (393)
T ss_dssp ESSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred cCcccccCC-CceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhH
Confidence 4999877 789999999998887754221 11234567777777778776654
Q ss_pred ccHHHHHHHHHHHHHHHHHhhcCCCCC-C-eEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEEEe
Q psy6548 141 ENMIENAYKMGEIFRSELRSRLSPDIV-P-VVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIRLS 213 (242)
Q Consensus 141 ~~~~~~~~~~~~~l~~~l~~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR~~ 213 (242)
+++.++++++++++++.| ++++-... . .....+.++++.++.. .+..++.+.|.++ ||.+.++ .++++|++
T Consensus 286 ~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~ 363 (393)
T 3kgw_A 286 ENCWRRHREATAHLHKHL-QEMGLKFFVKDPEIRLPTITTVTVPAG-YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIG 363 (393)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTTCCBSSSSGGGBCSSEEEEECCTT-BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-HHcCCeeccCChhhcCCeEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEE
Confidence 456788899999999999 66642221 1 1122346677887654 5788999999988 9999875 46799999
Q ss_pred c-cCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 214 P-ALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 214 ~-~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
+ +...+++++++++++|+++++++.++
T Consensus 364 ~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 364 LLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp CCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred ecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 7 55569999999999999999987654
No 100
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.90 E-value=2.1e-23 Score=178.10 Aligned_cols=224 Identities=15% Similarity=0.135 Sum_probs=158.3
Q ss_pred Chhh--hcCC-CCCEEEEEEcc-cccCCCcccCCHHHHHHHHHHH-HhhCCEEEEeccccccCccC---cc-cc-c----
Q psy6548 11 QVPA--KLKS-NPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALC-SQYNVLFIADEVQTGLGRTG---KL-LA-I---- 76 (242)
Q Consensus 11 d~~~--~~~~-~~~~~~i~~e~-~~~~~G~~~~~~~~l~~l~~l~-~~~~~~li~De~~~~~~~~g---~~-~~-~---- 76 (242)
|+++ +.+. ++++++|+++| ++|++|. +.+.+.+++|+++| ++||+++|+||+|.++...+ .. .. .
T Consensus 159 d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 237 (423)
T 3ez1_A 159 DVDAVERLAGTDPSVKGILFVPTYSNPGGE-TISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLAR 237 (423)
T ss_dssp CHHHHHHHHHSCTTEEEEEECSSSCTTTCC-CCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHH
T ss_pred CHHHHHHHHhhCCCceEEEECCCCCCCCCc-CCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhh
Confidence 4555 3343 67899998775 7888885 55667799999999 99999999999997432222 11 01 0
Q ss_pred --ccCCCCCCEEEeeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH--HH--h--ccHHHHHH
Q psy6548 77 --HYEDVRPDIVILGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDV--IL--E--ENMIENAY 148 (242)
Q Consensus 77 --~~~~~~~~~~~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~--~~--~--~~~~~~~~ 148 (242)
+..+....+.++||++.+| +|+||+++++++++.+.......+++.+++++.++.++++. .. . +...+.++
T Consensus 238 ~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 316 (423)
T 3ez1_A 238 DAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIA 316 (423)
T ss_dssp HHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 1112222244589997788 99999999999988887655556778888888887777765 11 1 22344455
Q ss_pred HHHHHHHHHHHhhcCC-C--CCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEecc
Q psy6548 149 KMGEIFRSELRSRLSP-D--IVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPA 215 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~ 215 (242)
++++.+++.|.+.++. + +....+..|+++|+.++.. +.+.+.+.|.++||.+.++ +.+++|++++
T Consensus 317 ~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~ 394 (423)
T 3ez1_A 317 PKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPT 394 (423)
T ss_dssp HHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCS
T ss_pred HHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcC
Confidence 5666666666444442 1 1112345688999999874 5778899999999999882 3579999986
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 216 LNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 216 ~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
.. +++++++++++|+++++++..
T Consensus 395 ~~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 395 RP-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp SS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHHHHHHHHH
Confidence 55 999999999999999988654
No 101
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.90 E-value=2e-23 Score=174.82 Aligned_cols=205 Identities=15% Similarity=0.187 Sum_probs=147.3
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccccc---CCCCCCEEEeecccc-C
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY---EDVRPDIVILGKALS-G 94 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~---~~~~~~~~~~sK~~~-~ 94 (242)
++++++++++.++|++|. +.+.+++++|+++|++||+++|+||+|+++...+... ... ++....+.++||+++ +
T Consensus 144 ~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~ 221 (364)
T 1lc5_A 144 TPDLDCLFLCTPNNPTGL-LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGF-IPALKDNPHIWVLRSLTKFYAIP 221 (364)
T ss_dssp CTTCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS-GGGCTTCTTEEEEEESTTTTTCT
T ss_pred cCCCCEEEEeCCCCCCCC-CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccch-hhHhccCCCEEEEEECchhhcCC
Confidence 356777777777899995 4577899999999999999999999998775433221 122 222222335889998 8
Q ss_pred CccchheeE-eChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHhhcCCCCCCeEee
Q psy6548 95 GLYPISAVL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EENMIENAYKMGEIFRSELRSRLSPDIVPVVRG 172 (242)
Q Consensus 95 g~~~~g~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 172 (242)
| +|+||++ +++++++.+.+. ..+++.|++++.++.++++... -+...++++++++++.+.| +.++. + ...++
T Consensus 222 G-~r~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~-~-~~~~~ 295 (364)
T 1lc5_A 222 G-LRLGYLVNSDDAAMARMRRQ--QMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQAL-CQLPL-L-TVYPG 295 (364)
T ss_dssp T-TCCEEEECCCHHHHHHHHHH--SCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHH-HTSTT-E-EECCC
T ss_pred c-cceEEEEECCHHHHHHHHHh--CCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-hcCCC-C-EECCC
Confidence 9 8999999 999988877652 2366788888888877776421 1335566777788888888 55532 1 11234
Q ss_pred eceeEEEEecCCchhHHHHHHHHHHCCceeccCC------CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 173 KGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS------NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.|.++++.++.. ..++.+.|.++||.+.++. ++++|+++ .++++++++++.|+++++++
T Consensus 296 ~g~~~~~~~~~~---~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 296 RANYLLLRCERE---DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAI---RSAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp SSSEEEEEESCT---TCCHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHHC---
T ss_pred CCeEEEEECCCc---HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhhcc
Confidence 567788887642 4568889999999998752 57999993 37889999999999888765
No 102
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.90 E-value=2.5e-23 Score=176.71 Aligned_cols=215 Identities=17% Similarity=0.145 Sum_probs=155.3
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc-ccccCCC-C---CC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL-AIHYEDV-R---PD 84 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~-~---~~ 84 (242)
|+++ +...+.++++|++++++|++|.++ +.+.+++|+++|++||+++|+||+|+++.+.+... ....... . ..
T Consensus 156 d~~~l~~~~~~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (410)
T 3e2y_A 156 DPRELESKFSSKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTIT 234 (410)
T ss_dssp CHHHHHTTCCTTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEE
T ss_pred CHHHHHhhcCCCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEE
Confidence 5666 444456899999999999999554 67789999999999999999999999876655321 2222221 1 22
Q ss_pred EEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH-------Hh--ccHHHHHHHHHHHH
Q psy6548 85 IVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVI-------LE--ENMIENAYKMGEIF 154 (242)
Q Consensus 85 ~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~-------~~--~~~~~~~~~~~~~l 154 (242)
+.++||+++ +| +|+||+++++++++.+.......+++.+++++.++.++++.. .. ++..+.++++++.+
T Consensus 235 ~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (410)
T 3e2y_A 235 IGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRM 313 (410)
T ss_dssp EEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHH
T ss_pred EecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHH
Confidence 334889999 89 999999999999888876555667788999998888887741 11 23556677788888
Q ss_pred HHHHHhhcCCCCCCeEeeeceeEEEEecCCc----------hhHHHHHHHHH-HCCceeccC-----------CCCEEEE
Q psy6548 155 RSELRSRLSPDIVPVVRGKGLLNAIVLDKSI----------LEVYDVCIKMK-DAGLVTKPI-----------SNNIIRL 212 (242)
Q Consensus 155 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~-~~gi~~~~~-----------~~~~lR~ 212 (242)
++.| +.++ +....+..++++|+++.... .+..++.++++ ++||.+.++ +.+++|+
T Consensus 314 ~~~L-~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRi 390 (410)
T 3e2y_A 314 VRLL-NSVG--LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRF 390 (410)
T ss_dssp HHHH-HTTT--CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEE
T ss_pred HHHH-HHCC--CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEE
Confidence 8888 5553 22233556788888876421 11346777654 679999764 1478999
Q ss_pred eccCcCCHHHHHHHHHHHHH
Q psy6548 213 SPALNITEQELREGLDIIIN 232 (242)
Q Consensus 213 ~~~~~~t~e~i~~~~~~l~~ 232 (242)
+ +..+++++++++++|++
T Consensus 391 s--~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 391 C--FIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp E--CCCCHHHHHHHHHHHHT
T ss_pred E--EcCCHHHHHHHHHHHHh
Confidence 9 45599999999999875
No 103
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=2.5e-22 Score=169.24 Aligned_cols=210 Identities=16% Similarity=0.237 Sum_probs=154.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHH----hhCCEEEEeccccccCccCcccccccCCCCCCE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCS----QYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDI 85 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~----~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 85 (242)
|+++ +...++++++|++++++|++|.+.+ +++|+++|+ +||+++|+||+|+ ++..+ .. .....+|+
T Consensus 143 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~--~~--~~~~~~d~ 213 (390)
T 1elu_A 143 AAAVLANHLGPKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLP--LD--FSRLEVDY 213 (390)
T ss_dssp HHHHHHTTCCTTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBC--CC--TTTSCCSE
T ss_pred hHHHHHHhcCCCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcC--CC--hhhcCCCE
Confidence 4455 4444568999999999999997776 999999999 9999999999996 33222 11 11234677
Q ss_pred EE--eeccccCCccchheeEeChhhhhccCCCCCC----------------------CCCCCCHHHHHHHHHHHHHHHhc
Q psy6548 86 VI--LGKALSGGLYPISAVLADDEVMGTLVPGTHG----------------------STYGGNPLACKLAMTALDVILEE 141 (242)
Q Consensus 86 ~~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~----------------------~~~~~~~~~~~~a~a~l~~~~~~ 141 (242)
++ ++|++.|| .++|++++++++++.+.+...+ ..++.+++++.++.++++.+...
T Consensus 214 ~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~ 292 (390)
T 1elu_A 214 YAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQ 292 (390)
T ss_dssp EEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEccccccccCC-CceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHc
Confidence 77 78988888 7899999999988887763211 12345667777777777766543
Q ss_pred ----cHHHHHHHHHHHHHHHHHhhcCC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-CCEEEEecc
Q psy6548 142 ----NMIENAYKMGEIFRSELRSRLSP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-NNIIRLSPA 215 (242)
Q Consensus 142 ----~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lR~~~~ 215 (242)
++.++++++++++.+.| +.++. ......++.+.++++.++.. .+..++.++|.++||.+.++. ++++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~iRis~~ 370 (390)
T 1elu_A 293 GTAEERYQAICQRSEFLWRGL-NQLPHVHCLATSAPQAGLVSFTVDSP-LGHRAIVQKLEEQRIYLRTIADPDCIRACCH 370 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH-HHSTTEEESCSSCCSSSEEEEEECSS-SCHHHHHHHHHHTTEECEEETTTTEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhcCCcEEecCccccccEEEEEcCCC-CCHHHHHHHHHHCCEEEEecCCCCeEEEecc
Confidence 36778888889999999 66532 11111034566777787643 467889999999999998874 689999998
Q ss_pred CcCCHHHHHHHHHHHHH
Q psy6548 216 LNITEQELREGLDIIIN 232 (242)
Q Consensus 216 ~~~t~e~i~~~~~~l~~ 232 (242)
...+++++++++++|++
T Consensus 371 ~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 371 YITDEEEINHLLARLAD 387 (390)
T ss_dssp TTCCHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 88999999999999865
No 104
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.90 E-value=5.2e-23 Score=172.11 Aligned_cols=200 Identities=18% Similarity=0.176 Sum_probs=148.7
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeecccc-CCccchh
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GGLYPIS 100 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~-~g~~~~g 100 (242)
++++++++++|++|.+.+ ++++.++|++||+++|+||+|++|...+........+....+.++||+++ +| +|+|
T Consensus 150 ~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G 224 (360)
T 3hdo_A 150 GKVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAG-MRIG 224 (360)
T ss_dssp SSEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTT-SCCE
T ss_pred CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCc-ccee
Confidence 458888888999997776 77889999999999999999987633221111122222223445889998 88 9999
Q ss_pred eeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEE
Q psy6548 101 AVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAI 179 (242)
Q Consensus 101 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 179 (242)
|+++++++++.+... ..+++.++++++++.++++.... ++..++++++++++++.| +.++ + ...++.+.++++
T Consensus 225 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L-~~~~--~-~~~~~~~~~~~~ 298 (360)
T 3hdo_A 225 LAIARPEVIAALDKI--RDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTEL-RSIG--Y-DVIPSQGNYLFA 298 (360)
T ss_dssp EEECCHHHHHHHHHH--SCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHTT--C-EECCCSSSEEEE
T ss_pred eEeeCHHHHHHHHHh--CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HHCC--C-EEcCCCccEEEE
Confidence 999999998888753 34567889999888888874221 446677888888888888 6553 2 223456778888
Q ss_pred EecCCchhHHHHHHHHHHCCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 180 VLDKSILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 180 ~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.++. .+..++.+.|.++||.+++++ ++++|++++ ++++++++++.|+++.+..
T Consensus 299 ~~~~--~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 299 TPPD--RDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp ECTT--CCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC--
T ss_pred ECCC--CCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhccc
Confidence 8765 367889999999999998764 488999943 9999999999998876653
No 105
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.90 E-value=1.7e-22 Score=169.61 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=151.4
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccc-ccCC-CCCCEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAI-HYED-VRPDIV 86 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~-~~~~-~~~~~~ 86 (242)
|+++ +.+.++++++|++++++|++|.+.+ ++++.++|+.+++++|+||+|++++........ +.++ ....+.
T Consensus 152 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~ 227 (369)
T 3cq5_A 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTS----LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSR 227 (369)
T ss_dssp CHHHHHHHHHHHCCSEEEEESSCTTTCCCCC----HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEE
T ss_pred CHHHHHHHhhccCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEE
Confidence 4455 3333336889999999999997665 667777777888999999999877532211111 2222 223344
Q ss_pred Eeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHhhcCC
Q psy6548 87 ILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EENMIENAYKMGEIFRSELRSRLSP 164 (242)
Q Consensus 87 ~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~-~~~~~~~~~~~~~~l~~~l~~~l~~ 164 (242)
++||+++ +| +|+||+++++++++.+... ..+++.+++++.++.++++..+ -++..++++++++++++.| ++.+
T Consensus 228 s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L-~~~g- 302 (369)
T 3cq5_A 228 TMSKAFDFAG-GRLGYFVANPAFIDAVMLV--RLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARL-EELG- 302 (369)
T ss_dssp ESSSTTSCGG-GCCEEEEECTHHHHHHHTT--SCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHH-HHHT-
T ss_pred echHhcCCcc-cceEEEEeCHHHHHHHHHc--CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HhCC-
Confidence 5899998 88 8999999999988888763 3356688888888888887532 1456778888889999998 5543
Q ss_pred CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-CCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 165 DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-NNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
+ ...+..+.++++.++. +..++.+.|.++||.+.+++ ++++|++++ ++++++++++.|+++++
T Consensus 303 -~-~~~~~~~~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 303 -Y-AVVPSESNFVFFGDFS---DQHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp -C-EEECCSSSEEEEECCS---SHHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred -C-EECCCCCeEEEEECCC---CHHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 2 1224456788888762 46789999999999999863 578999965 88999999999988764
No 106
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=3.6e-22 Score=167.76 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=157.5
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +.+.++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+. +.. ..... ...+|++++
T Consensus 115 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~~--~~~~~--~~~~d~~~~ 185 (384)
T 3zrp_A 115 KPGEVEEEVRKSEYKLVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSSV-GAE--EVKAE--EWNVDVYLT 185 (384)
T ss_dssp CHHHHHHHHHHSCEEEEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTTT-TTS--CCCTT--TTTCSEEEE
T ss_pred CHHHHHHHHHhCCCcEEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECcccc-cCc--ccccc--ccCCCEEEe
Confidence 6666 4444557999999999999997776 99999999999999999999962 111 11112 224677775
Q ss_pred --eccccCCccchheeEeChhhhhcc-CCCC---------------------CCCCC-CCCHHHHHHHHHHHHHHHh---
Q psy6548 89 --GKALSGGLYPISAVLADDEVMGTL-VPGT---------------------HGSTY-GGNPLACKLAMTALDVILE--- 140 (242)
Q Consensus 89 --sK~~~~g~~~~g~~~~~~~~~~~l-~~~~---------------------~~~~~-~~~~~~~~~a~a~l~~~~~--- 140 (242)
+|+++++ .++|++++++++++.+ .+.. ....+ +.+...+.++.++++.+..
T Consensus 186 s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~ 264 (384)
T 3zrp_A 186 ASQKALGSA-AGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGI 264 (384)
T ss_dssp ETTSTTCCC-SSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred cCcccccCC-CceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 4999877 7899999999887776 2110 11222 4456666666677776654
Q ss_pred ccHHHHHHHHHHHHHHHHHhhcCCCCCCe--EeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCC---CEEEEecc
Q psy6548 141 ENMIENAYKMGEIFRSELRSRLSPDIVPV--VRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISN---NIIRLSPA 215 (242)
Q Consensus 141 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~---~~lR~~~~ 215 (242)
+++.++++++++++.+.| ++++-..... ....+.++++.++. .+..++.+.|.++||.+.++.. +++|++++
T Consensus 265 ~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~ 341 (384)
T 3zrp_A 265 ENRIKRHTMVASAIRAGL-EALGLEIVARRPESYSNTVTGVILKV--ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHM 341 (384)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTTCCBSCSSGGGBCSSEEEEECSS--SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHH-HHCCCeEccCcccccCccEEEEECCC--CCHHHHHHHHHHCCEEEecCCCCCcCEEEEecc
Confidence 357788889999999999 6654211111 11246677888876 4688999999999999987631 78999998
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 216 LNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 216 ~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
..++++++++++++|+++++++.
T Consensus 342 ~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 342 GWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHHHHcC
Confidence 88999999999999999998764
No 107
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=3.8e-23 Score=173.09 Aligned_cols=210 Identities=16% Similarity=0.169 Sum_probs=152.4
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC---ccCccc-cc---ccCCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG---RTGKLL-AI---HYEDVR 82 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~---~~g~~~-~~---~~~~~~ 82 (242)
|+++ +...++++++|++++++|++|.+. +.+.+++++++| ++|+++|+||+|+++. ..+... .. ...+..
T Consensus 142 d~~~l~~~l~~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 3get_A 142 EFKKLYETHKDEIKLIFLCLPNNPLGECL-DASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV 219 (365)
T ss_dssp HHHHHHHHTTTTEEEEEEESSCTTTCCCC-CHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTE
T ss_pred CHHHHHHHhCCCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCE
Confidence 3444 333357899999999999999655 556677777777 6799999999998764 221111 11 112222
Q ss_pred CCEEEeecccc-CCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHh
Q psy6548 83 PDIVILGKALS-GGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 83 ~~~~~~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~ 160 (242)
..+.++||+++ +| +|+||+++++++++.+... ..+++.+++++.++.++++..+. ++..++++++++++++.| +
T Consensus 220 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l-~ 295 (365)
T 3get_A 220 LYLGTFSKLYGLGG-LRIGYGIANANIISAFYKL--RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFA-K 295 (365)
T ss_dssp EEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHH--SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEEeecchHhcCcc-hheEEEEcCHHHHHHHHHh--cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 22334889998 88 9999999999988887653 33456888888888877764321 345677788888888888 6
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC---CCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS---NNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
.++ + ...++.+.++|+.++.. +..++.+.|.++||.+.++. .+++|++++ ++++++++++.|++++
T Consensus 296 ~~g--~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 296 KHN--I-KIIDSYTNFITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp HTT--C-EECCCSSSEEEEECSSS--CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred hCC--C-EECCCCCeEEEEECCCC--CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 553 1 22344567788888763 57889999999999998875 689999944 8999999999998875
No 108
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.89 E-value=6.1e-22 Score=165.26 Aligned_cols=215 Identities=15% Similarity=0.202 Sum_probs=158.3
Q ss_pred CChhh--hcCCC-CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKSN-PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~~-~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+.+ .++++|++.++++++|.+.+ +++|+++|++||+++|+||+|+ ++..+ ..... ..+|++
T Consensus 117 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~--~~~~~--~~~di~ 187 (366)
T 1m32_A 117 PDVQAIDAILNADPTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIP--MDIAA--LHIDYL 187 (366)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCTTT--TTCSEE
T ss_pred CCHHHHHHHHhcCCCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcC--ccccc--cCccEE
Confidence 56666 34443 35788888888999997776 8999999999999999999996 22221 11122 246776
Q ss_pred E--eeccccCCccchheeEeChhhhhccCCCCCC------------------CCCCCCHHHHHHHHHHHHHHHhc----c
Q psy6548 87 I--LGKALSGGLYPISAVLADDEVMGTLVPGTHG------------------STYGGNPLACKLAMTALDVILEE----N 142 (242)
Q Consensus 87 ~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~------------------~~~~~~~~~~~~a~a~l~~~~~~----~ 142 (242)
+ ++|+++++ .++|++++++++++.+.+.... ..++.++.+++++.++++.+... +
T Consensus 188 ~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 266 (366)
T 1m32_A 188 ISSANKCIQGV-PGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAA 266 (366)
T ss_dssp EEESSSTTCCC-SSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred EecCcccccCC-CceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhH
Confidence 6 67999876 6789999999988887653111 12466778887888888876543 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCeE-eeeceeEEEEecC--CchhHHHHHHHHHHCCceeccC---CCCEEEEeccC
Q psy6548 143 MIENAYKMGEIFRSELRSRLSPDIVPVV-RGKGLLNAIVLDK--SILEVYDVCIKMKDAGLVTKPI---SNNIIRLSPAL 216 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~~~~~---~~~~lR~~~~~ 216 (242)
+.++++++++++++.| ++++-...... ...+.++++.++. . .+..++.+.|.++||.+.++ +.+.+|++++.
T Consensus 267 ~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~ 344 (366)
T 1m32_A 267 RHQRYQQNQRSLVAGM-RALGFNTLLDDELHSPIITAFYSPEDPQ-YRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIG 344 (366)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCCBSSCGGGBCSSEEEEECCCCTT-CCHHHHHHHHHHTTEECEECCCSSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHH-HHCCCeeccCchhcCceEEEEEcCccCC-CCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCC
Confidence 6788889999999999 66532111111 1345688888874 3 46788999999999999876 46899999998
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q psy6548 217 NITEQELREGLDIIINTINT 236 (242)
Q Consensus 217 ~~t~e~i~~~~~~l~~~l~~ 236 (242)
.++++++++++++|++++++
T Consensus 345 ~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 345 EVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp SCCHHHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 88999999999999987654
No 109
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.89 E-value=1.3e-22 Score=172.08 Aligned_cols=216 Identities=13% Similarity=0.134 Sum_probs=157.4
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE-
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI- 87 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~- 87 (242)
|+++ +.+.++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+. +.. ......+ ..|+++
T Consensus 126 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~--~~~~~~~--~~d~~~~ 196 (411)
T 3nnk_A 126 TPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATASL-GGN--PLETDVW--GLDAVSA 196 (411)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTTB-TTB--CCCTTTT--TCSEEEC
T ss_pred CHHHHHHHHhhCCCeEEEEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCccc-CCc--ccchhcc--CCcEEEe
Confidence 6676 3344448999999999999997766 88999999999999999999862 111 1222222 356766
Q ss_pred -eeccccCCccchheeEeChhhhhccCCCC------------------------------------CCCCCCCCHHHHHH
Q psy6548 88 -LGKALSGGLYPISAVLADDEVMGTLVPGT------------------------------------HGSTYGGNPLACKL 130 (242)
Q Consensus 88 -~sK~~~~g~~~~g~~~~~~~~~~~l~~~~------------------------------------~~~~~~~~~~~~~~ 130 (242)
++|+++++ .++|++++++++++.+.+.. ....++.+..++++
T Consensus 197 s~~K~l~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 275 (411)
T 3nnk_A 197 GMQKCLGGP-SGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFG 275 (411)
T ss_dssp CSTTTTCCC-SSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHH
T ss_pred cCccccCCC-CceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHH
Confidence 56998877 78999999998887665422 01123456677777
Q ss_pred HHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhcCCCCCC-eEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC
Q psy6548 131 AMTALDVILEE---NMIENAYKMGEIFRSELRSRLSPDIVP-VVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI 205 (242)
Q Consensus 131 a~a~l~~~~~~---~~~~~~~~~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~ 205 (242)
+.++++.+... ++.++++++++++++.| ++++-.... .....+.++++.++.. .+..++.+.|.++ ||.++++
T Consensus 276 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g 353 (411)
T 3nnk_A 276 ARECARLILQEGLDYGIARHKLHGDALVKGI-QAMGLETFGDLKHKMNNVLGVVIPQG-INGDQARKLMLEDFGIEIGTS 353 (411)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHTTCCBCSCGGGBCSSEEEEECCTT-CCHHHHHHHHHHHHSEEEEEC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHcCCEeCCCcccccccEEEEECCCC-CCHHHHHHHHHHhcCeEEeCc
Confidence 77777766543 56788889999999999 665422111 1122467788888654 5688999999887 9999874
Q ss_pred ----CCCEEEEec-cCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 206 ----SNNIIRLSP-ALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 206 ----~~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.++++|+++ +...+++++++++++|+++++++.
T Consensus 354 ~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 354 FGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 467999997 667799999999999999998753
No 110
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.89 E-value=9.1e-23 Score=173.88 Aligned_cols=208 Identities=13% Similarity=0.184 Sum_probs=149.3
Q ss_pred CCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHH------hhCCEEEEeccccccCccCc---ccccccCCCCCC---EE
Q psy6548 20 PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCS------QYNVLFIADEVQTGLGRTGK---LLAIHYEDVRPD---IV 86 (242)
Q Consensus 20 ~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~------~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~---~~ 86 (242)
+..++++++++ +|++|. +.+.+.+++|+++|+ +||+++|+||+|.+|+..+. .+.....++.++ ++
T Consensus 178 ~~~~~vi~~~p~~NPtG~-~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 256 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGY-SIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCV 256 (418)
T ss_dssp CSEEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEE
T ss_pred CCCEEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEE
Confidence 34557888877 899995 456677999999999 89999999999988865553 122222344455 33
Q ss_pred --Eeecccc-CCccchheeEe---ChhhhhccCCCCCC---CC-CCCCHHHHHHHHHHHHHH------Hh--ccHHHHHH
Q psy6548 87 --ILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG---ST-YGGNPLACKLAMTALDVI------LE--ENMIENAY 148 (242)
Q Consensus 87 --~~sK~~~-~g~~~~g~~~~---~~~~~~~l~~~~~~---~~-~~~~~~~~~~a~a~l~~~------~~--~~~~~~~~ 148 (242)
++||+++ +| +|+||+++ ++++++.+...... .+ ...+.+++.++.++++.. .. +.+.+.++
T Consensus 257 ~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (418)
T 3rq1_A 257 CYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIR 335 (418)
T ss_dssp EEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4889998 89 99999998 88888877653111 12 246777777776666432 11 23456777
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHH
Q psy6548 149 KMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
++++.+.+.| +.++ +....+..++++|+.+. +..++.+.|.++||.+.|+ ++++|+++. ..++++++++++
T Consensus 336 ~~~~~l~~~L-~~~g--~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g-~~~iRis~~-~~~~~~i~~~~~ 406 (418)
T 3rq1_A 336 DRADIFKQEA-AQVG--LPMLPYRGGFFITIPTD----SANAICEELKKEHIYVIAL-ANGIRIAAC-GIPKCQMTGLAE 406 (418)
T ss_dssp HHHHHHHHHH-HHHT--CCCCCCCSSSEEEEECT----THHHHHHHHHHTTEECEEC-SSEEEEEGG-GSCHHHHTTHHH
T ss_pred HHHHHHHHHH-HhcC--CCCCCCCceEEEEcCCC----CHHHHHHHHHhCCEEEecC-CCCeEEEEe-cCCHHHHHHHHH
Confidence 8888888888 6554 22223445667777653 4678889999999999997 678999955 359999999999
Q ss_pred HHHHHHHHHh
Q psy6548 229 IIINTINTMA 238 (242)
Q Consensus 229 ~l~~~l~~~~ 238 (242)
+|+++++++.
T Consensus 407 ~l~~~l~~~~ 416 (418)
T 3rq1_A 407 KIYNAMKSLG 416 (418)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 111
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.82 E-value=5.3e-25 Score=186.27 Aligned_cols=219 Identities=11% Similarity=0.061 Sum_probs=153.4
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc----cccc--CCCC
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL----AIHY--EDVR 82 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~----~~~~--~~~~ 82 (242)
|+++ +.+.+++++++++++++|++|.+ ++.+++++|+++|++||+++|+||+|+++...+... .... .+..
T Consensus 152 d~~~l~~~l~~~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 230 (392)
T 3b1d_A 152 DFEQLENDIVENDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFA 230 (392)
Confidence 3444 33443678889998899999965 566789999999999999999999999876554311 1111 2233
Q ss_pred CCEEEeecccc-CCccchheeEeCh-hhhhccCCCCCCCCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Q psy6548 83 PDIVILGKALS-GGLYPISAVLADD-EVMGTLVPGTHGSTY-GGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 83 ~~~~~~sK~~~-~g~~~~g~~~~~~-~~~~~l~~~~~~~~~-~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~ 157 (242)
..+.++||+++ +| +|+||+++++ ++++.+......+++ +.+++++.++.++++.... ++..+.++++++.+.+.
T Consensus 231 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (392)
T 3b1d_A 231 LVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEY 309 (392)
Confidence 44556999998 89 9999999865 588888775454443 4577888887777764221 34556666777777777
Q ss_pred HHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC------CCCEEEEeccCcCCHHHHHHHHHH
Q psy6548 158 LRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI------SNNIIRLSPALNITEQELREGLDI 229 (242)
Q Consensus 158 l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~------~~~~lR~~~~~~~t~e~i~~~~~~ 229 (242)
| ++ ++. +....+..+++.|++++..+.+..++.+.|. ++||.+.++ +++++|+++. .+++++++++++
T Consensus 310 l-~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~e~i~~~l~~ 385 (392)
T 3b1d_A 310 F-AQEAPR-LKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA--APKSLVEEICKR 385 (392)
Confidence 7 44 432 2222234456667887652235678899997 789999875 3568999944 578899999999
Q ss_pred HHHHHH
Q psy6548 230 IINTIN 235 (242)
Q Consensus 230 l~~~l~ 235 (242)
|+++++
T Consensus 386 l~~~l~ 391 (392)
T 3b1d_A 386 IVCCLP 391 (392)
Confidence 988765
No 112
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=4.9e-22 Score=167.43 Aligned_cols=217 Identities=13% Similarity=0.110 Sum_probs=146.3
Q ss_pred ccccCCC-----Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC--ccCc--
Q psy6548 4 QFPVKSK-----QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG--RTGK-- 72 (242)
Q Consensus 4 ~~~~~~~-----d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~--~~g~-- 72 (242)
+..+|.+ |+++ +.+.+.+++++++++++|++|.+.+ +++|+++|++||+++|+||+|+++. ..+.
T Consensus 147 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~ 222 (397)
T 3f9t_A 147 YIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKY 222 (397)
T ss_dssp EEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGG
T ss_pred eEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhccccc
Confidence 3455555 6666 3333337889999999999997765 9999999999999999999997642 2222
Q ss_pred -------ccccccCCCCCCEEE--eeccccCCccchheeEeCh-hhhhccC---CCCCC--------CCCCCCHHHHHHH
Q psy6548 73 -------LLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADD-EVMGTLV---PGTHG--------STYGGNPLACKLA 131 (242)
Q Consensus 73 -------~~~~~~~~~~~~~~~--~sK~~~~g~~~~g~~~~~~-~~~~~l~---~~~~~--------~~~~~~~~~~~~a 131 (242)
.+.... ..|+++ ++|++++| .++|+++.++ .+.+.+. +.... .....+.+++.++
T Consensus 223 ~~~~~~~~~~~~~---~~~~~~~s~~K~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 298 (397)
T 3f9t_A 223 KKKGVNYKFDFSL---GVDSITIDPHKMGHCP-IPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAV 298 (397)
T ss_dssp CCTTCCCCCSGGG---TCSEEECCTTTTTCCC-SSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHH
T ss_pred ccccccccccccc---cCCeEEEccccccCCC-CCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHH
Confidence 112122 335444 67998888 7999988764 4554442 21111 1111233444444
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-CCEE
Q psy6548 132 MTALDVILEENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-NNII 210 (242)
Q Consensus 132 ~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~l 210 (242)
.+.+....-++..++.+++++++++.| ++++- ....++.+.++++..+. ..++.+.|.++||.+.++. ++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g~--~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~~~~~~~~ 371 (397)
T 3f9t_A 299 LRYLGREGQRKIVNECMENTLYLYKKL-KENNF--KPVIEPILNIVAIEDED----YKEVCKKLRDRGIYVSVCNCVKAL 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTC--CBSSCCSSSEEEEECTT----HHHHHHHHHHTTCBCEECSSSSEE
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHH-HHCCC--EEEcCCCccEEEEEeCC----HHHHHHHHHhCCeEEeccCCCCEE
Confidence 443332222456778888999999999 66532 21122445667776544 5789999999999998874 5899
Q ss_pred EEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 211 RLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 211 R~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
|++++..++++++++++++|+++++
T Consensus 372 Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 372 RIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 9999988999999999999998764
No 113
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.89 E-value=2.6e-22 Score=170.94 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=152.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc----cc-ccccCCCCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK----LL-AIHYEDVRPD 84 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~----~~-~~~~~~~~~~ 84 (242)
|+++ +...+.++++++++.++|++|. ..+++++++|+++|++||+++|+||+|.++...|. .. ....++...+
T Consensus 166 d~~~l~~~l~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (416)
T 1bw0_A 166 DLDEIRRLKDDKTKLLIVTNPSNPCGS-NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVP 244 (416)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCC
T ss_pred CHHHHHHHhccCCeEEEEeCCCCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCc
Confidence 5666 3333456777777778899995 55778999999999999999999999988754443 11 2222222222
Q ss_pred E---EEeecccc-CCccchheeEeChh--hhhccCCC---CCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHH
Q psy6548 85 I---VILGKALS-GGLYPISAVLADDE--VMGTLVPG---THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGE 152 (242)
Q Consensus 85 ~---~~~sK~~~-~g~~~~g~~~~~~~--~~~~l~~~---~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~ 152 (242)
+ .++||+++ +| +|+||++++++ +++.+... ....+++.++++++++.++++.... ++..++++++++
T Consensus 245 ~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (416)
T 1bw0_A 245 RVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 323 (416)
T ss_dssp EEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 2 23889987 78 89999998653 44333211 0123567788888888888773211 345677788888
Q ss_pred HHHHHHHhhcCCCCCCeEeeeceeEEEEecCC----chhHHHHHHHHH-HCCceeccCC----CCEEEEeccCcCCHHHH
Q psy6548 153 IFRSELRSRLSPDIVPVVRGKGLLNAIVLDKS----ILEVYDVCIKMK-DAGLVTKPIS----NNIIRLSPALNITEQEL 223 (242)
Q Consensus 153 ~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~-~~gi~~~~~~----~~~lR~~~~~~~t~e~i 223 (242)
++.+.| +.++. +....+..++++|+.++.. ..+..++.+.|. ++||.+.++. ++++|+++ ..+++++
T Consensus 324 ~l~~~L-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~~~e~l 399 (416)
T 1bw0_A 324 YLYNHI-GECIG-LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TRPVEVY 399 (416)
T ss_dssp HHHHHH-TTSTT-EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CSCHHHH
T ss_pred HHHHHH-HhCCC-CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cCCHHHH
Confidence 888888 65531 1111234577888887631 025678888885 8899998752 57999996 4689999
Q ss_pred HHHHHHHHHHHHHHh
Q psy6548 224 REGLDIIINTINTMA 238 (242)
Q Consensus 224 ~~~~~~l~~~l~~~~ 238 (242)
++++++|.+++++.+
T Consensus 400 ~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 400 REAVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988743
No 114
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.89 E-value=6.1e-22 Score=164.47 Aligned_cols=215 Identities=17% Similarity=0.124 Sum_probs=154.4
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|+++ +.+.++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|. ++... .....+ .+|+++
T Consensus 111 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~ 181 (353)
T 2yrr_A 111 VDPEAVARALKRRRYRMVALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDYAF 181 (353)
T ss_dssp CCHHHHHHHHHHSCCSEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceEEE
Confidence 35555 3333337889999999999997776 8899999999999999999994 43332 122222 357777
Q ss_pred --eeccccCCccchheeEeChhhhhccCC--C-------------CCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHH
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVP--G-------------THGSTYGGNPLACKLAMTALDVILEE---NMIENA 147 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~--~-------------~~~~~~~~~~~~~~~a~a~l~~~~~~---~~~~~~ 147 (242)
++|+++++ .++|++++++++++.+.. . .....++.+..++.++.++++.+... ++.+++
T Consensus 182 ~s~~K~~~~~-~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 260 (353)
T 2yrr_A 182 TGSQKCLSAP-PGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRA 260 (353)
T ss_dssp CCTTSTTCCC-SSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ecCcccccCC-CceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 46998876 678999999998877752 0 01223355677777777788776443 467888
Q ss_pred HHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----CCCEEEEeccCcCCHHHH
Q psy6548 148 YKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPALNITEQEL 223 (242)
Q Consensus 148 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lR~~~~~~~t~e~i 223 (242)
+++++++++.| ++++-.........++++++.++.. .+..++.+.|.++||.+.++ .++++|++++...+++++
T Consensus 261 ~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~ 338 (353)
T 2yrr_A 261 REVYAWVLEEL-KARGFRPYPKASPLPTVLVVRPPEG-VDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREA 338 (353)
T ss_dssp HHHHHHHHHHH-HHTTCEESCSSSBCTTEEEEECCTT-CCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHH
T ss_pred HHHHHHHHHHH-HHCCCccccCccCCCeEEEEECCCC-CCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHH
Confidence 88999999999 6553111111112456678887643 46788999999999999865 367899998878899999
Q ss_pred H-HHHHHHHHHHHH
Q psy6548 224 R-EGLDIIINTINT 236 (242)
Q Consensus 224 ~-~~~~~l~~~l~~ 236 (242)
+ +++++|+++++.
T Consensus 339 ~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 339 YQAFLKALDRALAL 352 (353)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 9 999999988753
No 115
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=2.8e-21 Score=163.49 Aligned_cols=211 Identities=15% Similarity=0.166 Sum_probs=152.2
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI-- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~-- 87 (242)
|+++ +...+.++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+.. .. ...... ..+|+++
T Consensus 153 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~g-~~--~~~~~~--~~~d~~~~s 223 (406)
T 1kmj_A 153 QLETLPTLFDEKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQAVM-HH--PVDVQA--LDCDFYVFS 223 (406)
T ss_dssp CGGGHHHHCCTTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTT-TS--CCCHHH--HTCSEEEEE
T ss_pred CHHHHHHHhccCCeEEEEeCCCccccCcCC----HHHHHHHHHHcCCEEEEEchhhcC-CC--CCcccc--cCCCEEEEE
Confidence 4566 4444568999999999999998776 999999999999999999999732 22 111111 2467765
Q ss_pred eeccccCCccchheeEeChhhhhccCCCCCCCC---------------------CCCCHHHHHHHH-HHHHHHHh---cc
Q psy6548 88 LGKALSGGLYPISAVLADDEVMGTLVPGTHGST---------------------YGGNPLACKLAM-TALDVILE---EN 142 (242)
Q Consensus 88 ~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~---------------------~~~~~~~~~~a~-a~l~~~~~---~~ 142 (242)
++|.++ + .++|++++++++++.+.+...+++ .+.+++++.++. ++++.+.+ ++
T Consensus 224 ~~K~~g-~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 301 (406)
T 1kmj_A 224 GHKLYG-P-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNN 301 (406)
T ss_dssp GGGTTS-C-TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred chhccC-C-CCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHH
Confidence 789996 2 347999999999988876543221 223455555444 67776654 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCeEee--eceeEEEEecCCchhHHHHHHHHHHCCceeccCC------------CC
Q psy6548 143 MIENAYKMGEIFRSELRSRLSPDIVPVVRG--KGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS------------NN 208 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------~~ 208 (242)
+.++++++++++++.| ++++. +. .... .+.++.+.++. .+..++.+.|.++||.+.++. ++
T Consensus 302 ~~~~~~~~~~~l~~~L-~~~~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~ 376 (406)
T 1kmj_A 302 IAEYEQNLMHYALSQL-ESVPD-LT-LYGPQNRLGVIAFNLGK--HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA 376 (406)
T ss_dssp HHHHHHHHHHHHHHHH-TTSTT-EE-EESCTTCCSEEEEEETT--CCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHHHH-hcCCC-eE-EecCCCcCCEEEEEECC--CCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCC
Confidence 6777888888999988 66531 11 1112 45666677754 357788999999999998642 57
Q ss_pred EEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 209 IIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 209 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+|++++..+|++|++++++.|+++++.+
T Consensus 377 ~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 377 MCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999899999999999999988764
No 116
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.89 E-value=4.3e-23 Score=172.87 Aligned_cols=202 Identities=13% Similarity=0.162 Sum_probs=151.0
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--eeccccCCcc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGGLY 97 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~sK~~~~g~~ 97 (242)
+++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+++. .+ .....+ .+|+++ ++|+++++ .
T Consensus 146 ~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~-~~--~~~~~~--~~di~~~s~sK~~~~~-~ 215 (371)
T 2e7j_A 146 GEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAIGR-MP--VSLKEI--GADFIVGSGHKSMAAS-G 215 (371)
T ss_dssp SCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTBTT-BC--CCHHHH--TCSEEEEEHHHHSSCC-S
T ss_pred CCeEEEEEECCCCCCcccCC----HHHHHHHHHHcCCeEEEECccccCC-CC--CChhhc--CCCEEEecCCcCCCCC-C
Confidence 68999999999999998776 7999999999999999999997532 21 111222 356665 68999988 7
Q ss_pred chheeEeChhhhhc-cCCCCCC--C-----CCCCCHHHHHHHHHHHHHHHhccHHHHH--HHHHHHHHHHHHhhcCCCCC
Q psy6548 98 PISAVLADDEVMGT-LVPGTHG--S-----TYGGNPLACKLAMTALDVILEENMIENA--YKMGEIFRSELRSRLSPDIV 167 (242)
Q Consensus 98 ~~g~~~~~~~~~~~-l~~~~~~--~-----~~~~~~~~~~~a~a~l~~~~~~~~~~~~--~~~~~~l~~~l~~~l~~~~~ 167 (242)
|+|++++++++++. +.+...+ . +++.++..++++.++++.+.. ++.+++ +++++++++.| +.++-...
T Consensus 216 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L-~~~~~~~~ 293 (371)
T 2e7j_A 216 PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEM-EKLGIKQL 293 (371)
T ss_dssp SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHH-HHTTCEEE
T ss_pred CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHcCcEEe
Confidence 99999999988887 7654431 2 345566777777778877655 566778 88999999999 65531111
Q ss_pred CeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-------C--CCEEE-EeccCc-CCHHHHHHHHHHHHHHHHH
Q psy6548 168 PVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-------S--NNIIR-LSPALN-ITEQELREGLDIIINTINT 236 (242)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------~--~~~lR-~~~~~~-~t~e~i~~~~~~l~~~l~~ 236 (242)
......+.++++.++ +..++.+.|.++||.+.+. + ++++| ++++.. ++++++++++++|++++++
T Consensus 294 ~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 294 GDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp SSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCceEEEECC----CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 111113668888876 4678899999999998761 1 57899 998877 8999999999999998875
Q ss_pred H
Q psy6548 237 M 237 (242)
Q Consensus 237 ~ 237 (242)
+
T Consensus 370 ~ 370 (371)
T 2e7j_A 370 Y 370 (371)
T ss_dssp C
T ss_pred c
Confidence 3
No 117
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.88 E-value=2.5e-21 Score=164.72 Aligned_cols=216 Identities=16% Similarity=0.189 Sum_probs=157.5
Q ss_pred cccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCC
Q psy6548 5 FPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRP 83 (242)
Q Consensus 5 ~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 83 (242)
..+|. +++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ ++... .....+ .+
T Consensus 150 ~~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~~ 218 (416)
T 1qz9_A 150 RLVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--GA 218 (416)
T ss_dssp EEESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TC
T ss_pred EEeCc--HHHHHHHhCCCceEEEEeccccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--CC
Confidence 34454 555 3333458999999999999997776 8999999999999999999996 33221 111222 36
Q ss_pred CEEEe--eccccCCccch-heeEeChhhhhccCCCCCC----------------------C-CCCCCHHHHHHHHHHHHH
Q psy6548 84 DIVIL--GKALSGGLYPI-SAVLADDEVMGTLVPGTHG----------------------S-TYGGNPLACKLAMTALDV 137 (242)
Q Consensus 84 ~~~~~--sK~~~~g~~~~-g~~~~~~~~~~~l~~~~~~----------------------~-~~~~~~~~~~~a~a~l~~ 137 (242)
|++++ +|++++| .++ |++++++++++.+.+...+ . ..+.++.+++++.++++.
T Consensus 219 d~~~~s~~K~l~~g-~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 297 (416)
T 1qz9_A 219 DYAIGCTYKYLNGG-PGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDV 297 (416)
T ss_dssp SEEEECSSSTTCCC-TTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred CEEEecCcccCCCC-CCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHH
Confidence 77775 5999877 788 9999999888777653222 1 124566777777788887
Q ss_pred HHh---ccHHHHHHHHHHHHHHHHHhhc-CC-CCC-CeEe---eeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCC
Q psy6548 138 ILE---ENMIENAYKMGEIFRSELRSRL-SP-DIV-PVVR---GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNN 208 (242)
Q Consensus 138 ~~~---~~~~~~~~~~~~~l~~~l~~~l-~~-~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 208 (242)
+.. +++.++++++++++++.| +.+ +. ++. .... ..+.++++.++. ..++.+.|.++||.+...+.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~gi~~~~~~~~ 372 (416)
T 1qz9_A 298 FAQTDMASLRRKSLALTDLFIELV-EQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALIDRGVIGDYREPR 372 (416)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHH-HHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHHTTTEECEEETTT
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHH-HhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHHhCCcEeccCCCC
Confidence 754 346788889999999999 554 31 111 1111 135677887753 578999999999998776788
Q ss_pred EEEEecc-CcCCHHHHHHHHHHHHHHHHHH
Q psy6548 209 IIRLSPA-LNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 209 ~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+|++++ +.++++++++++++|++++++.
T Consensus 373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 373 IMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp EEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 9999986 5789999999999999998764
No 118
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=2.5e-22 Score=169.30 Aligned_cols=218 Identities=11% Similarity=0.076 Sum_probs=154.6
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|++. +.+.++++++|++..+.+++|. ..+.+++++|+++|++||+++|+|++++ | +.++....++. |+++
T Consensus 122 ~d~~~l~~~i~~~~~~~v~~~~~~~~~G~-~~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~--d~~~ 194 (379)
T 3ke3_A 122 VDIETAVAKIKEDKSAIVYAPHVETSSGI-ILSEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMKELGI--DVLI 194 (379)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESEETTTTE-ECCHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHHHHTC--SEEE
T ss_pred CCHHHHHHHHhhcCCcEEEEEeecCCCce-eCCHHHHHHHHHHHHHcCCEEEEEeccc--C--CccccccccCC--CEEE
Confidence 56666 4444457888999999999994 5557789999999999999999999986 2 22333334444 6655
Q ss_pred --eeccccCCccchheeEeChhhhhccCCCC-----C-----------------CCCCCCCHHHHHHHHHHHHHHHhc--
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPGT-----H-----------------GSTYGGNPLACKLAMTALDVILEE-- 141 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~~-----~-----------------~~~~~~~~~~~~~a~a~l~~~~~~-- 141 (242)
++|+++++ .++|++++++++++.+.+.. . .++++.++..++++.++++.+.++
T Consensus 195 ~s~~K~l~~~-~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~ 273 (379)
T 3ke3_A 195 SAPQKGWSST-PCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGF 273 (379)
T ss_dssp ECTTTTTCSC-CCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred ecchhhcCCC-CceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcH
Confidence 55999977 67899999998887765411 0 112356677777777888877653
Q ss_pred -cHHHHHHHHHHHHHHHHHhhcCCCCCCeEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC---------CCEE
Q psy6548 142 -NMIENAYKMGEIFRSELRSRLSPDIVPVVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS---------NNII 210 (242)
Q Consensus 142 -~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---------~~~l 210 (242)
++.++.+++++++++.| +.++-....... ....+..+..+. .+ ..+.+.|.++||.+.++. .+.+
T Consensus 274 ~~~~~~~~~l~~~l~~~l-~~~g~~~~~~~~~~~~~i~~~~~~~--~~-~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~l 349 (379)
T 3ke3_A 274 DILRDAQWELGNRVRKVL-TDKGIESVAAEGFEAPGVVVSYTER--DD-MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTF 349 (379)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTTCCBSBCTTCBCSSEEEEECSC--HH-HHSSHHHHHTTCCCEECCCCSSCCCTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHH-HHcCCEecCCccccCceEEEEccCC--cc-hHHHHHHHHCCeEEeCCccccccccCcCCEE
Confidence 56788888999999999 666522211111 122233343332 12 223778889999987653 6799
Q ss_pred EEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 211 RLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 211 R~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
|++++..+|++||++++++|+++++++..
T Consensus 350 Ris~~~~~t~~di~~~~~~l~~~l~~~~~ 378 (379)
T 3ke3_A 350 RLGLFGLDKLTDIDGTVERFEKALDEVLA 378 (379)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred EEeCCcCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999988753
No 119
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=7e-22 Score=167.93 Aligned_cols=215 Identities=13% Similarity=0.119 Sum_probs=156.0
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE-
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI- 87 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~- 87 (242)
|+++ +.+.++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. ...... ...|+++
T Consensus 124 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d~~~~ 194 (416)
T 3isl_A 124 DPEDIIREIKKVKPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVAT-IGGC--EVKVDE--WKIDAAIG 194 (416)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTT-TTTS--CCCTTT--TTCSEEEC
T ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCcc-ccCC--Ccchhh--cCCCEEEe
Confidence 6666 4444367899999999999997776 8899999999999999999986 2111 111122 2457777
Q ss_pred -eeccccCCccchheeEeChhhhhccCCCC-------------------------------------CC-CCCCCCHHHH
Q psy6548 88 -LGKALSGGLYPISAVLADDEVMGTLVPGT-------------------------------------HG-STYGGNPLAC 128 (242)
Q Consensus 88 -~sK~~~~g~~~~g~~~~~~~~~~~l~~~~-------------------------------------~~-~~~~~~~~~~ 128 (242)
++|+++++ .++|+++.++++++.+.+.. .. ...+.+..++
T Consensus 195 s~~K~l~g~-~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (416)
T 3isl_A 195 GTQKCLSVP-SGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTML 273 (416)
T ss_dssp CSSSTTCCC-SSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHH
T ss_pred cCccccCCC-CCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHH
Confidence 55998877 78999999998887665321 11 1224466777
Q ss_pred HHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhcCCCCCCe-EeeeceeEEEEecCCchhHHHHHHHHHHC-Cceec
Q psy6548 129 KLAMTALDVILE---ENMIENAYKMGEIFRSELRSRLSPDIVPV-VRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTK 203 (242)
Q Consensus 129 ~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~ 203 (242)
.++.++++.+.. +++.++++++++++.+.| ++++-..... ....+.++++.++.. .+..++.+.|.++ ||.++
T Consensus 274 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~ 351 (416)
T 3isl_A 274 YALREGVRLVLEEGLETRFERHRHHEAALAAGI-KAMGLRLFGDDSCKMPVVTCVEIPGG-IDGESVRDMLLAQFGIEIA 351 (416)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHTTCCBCSCGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECB
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHcCCEeccCccccCCcEEEEeCCCC-CCHHHHHHHHHHhCCEEEe
Confidence 777777776654 357788889999999999 6654211111 112356788888654 5688999999887 99998
Q ss_pred cC----CCCEEEEeccCcCCHHH-HHHHHHHHHHHHHHH
Q psy6548 204 PI----SNNIIRLSPALNITEQE-LREGLDIIINTINTM 237 (242)
Q Consensus 204 ~~----~~~~lR~~~~~~~t~e~-i~~~~~~l~~~l~~~ 237 (242)
++ .++++|++++...++++ +++++++|+++++++
T Consensus 352 ~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 352 SSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp CCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 64 46799999877677777 999999999999875
No 120
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.88 E-value=1.7e-21 Score=163.55 Aligned_cols=212 Identities=15% Similarity=0.183 Sum_probs=147.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI-- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~-- 87 (242)
|+++ +...+++++++++++++|++|.+.+ +++|+++|++||+++|+||+|+..+.. +....++ .|+++
T Consensus 133 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~--~d~~~~s 203 (376)
T 3f0h_A 133 TKEKLYEYDNQNFTGLLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADP---FNMNECG--ADVMITG 203 (376)
T ss_dssp CHHHHHTTTTSCCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHT--CSEEEEE
T ss_pred CHHHHHHhhccCceEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCcc---ccccccC--ccEEEec
Confidence 4555 5556778999999999999997776 999999999999999999999743221 2223333 35555
Q ss_pred eeccccCCccchheeEeChhhhhccCCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHhc----cHHHH
Q psy6548 88 LGKALSGGLYPISAVLADDEVMGTLVPGTH-----------------GSTYGGNPLACKLAMTALDVILEE----NMIEN 146 (242)
Q Consensus 88 ~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~a~a~l~~~~~~----~~~~~ 146 (242)
++|+++++ .++|+++.++++++.+.+... +..++.+..+++++.++++.+... ++.++
T Consensus 204 ~~K~l~~~-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 282 (376)
T 3f0h_A 204 SQKVLACP-PGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVAR 282 (376)
T ss_dssp TTTTTCCC-SSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcccccCC-CceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 66999966 678999999998877764211 113344454556666777766543 35566
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEEEeccCcCCHH
Q psy6548 147 AYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIRLSPALNITEQ 221 (242)
Q Consensus 147 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR~~~~~~~t~e 221 (242)
.+++++++++.| +.++..... ......++.+.. .. .+..++.+.|.++ ||.++++ +++++|++++..+|++
T Consensus 283 ~~~~~~~l~~~L-~~~~~~~~~-~~~~~~~~~~~~-~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e 358 (376)
T 3f0h_A 283 IASQAADFRAKI-KDLPFELVS-ESPANGVTSVHP-TT-ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHE 358 (376)
T ss_dssp HHHHHHHHHHHT-TTSSEEECC-SSBBTTEEEEEE-SS-SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHH
T ss_pred HHHHHHHHHHHH-HHcCCccCc-cccCceEEEEeC-CC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHH
Confidence 666777777777 544311111 112233344433 22 4678999999998 9999865 3578999999889999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6548 222 ELREGLDIIINTINT 236 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~ 236 (242)
++++++++|++++++
T Consensus 359 ~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 359 DNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 121
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.88 E-value=4.8e-21 Score=159.17 Aligned_cols=205 Identities=15% Similarity=0.067 Sum_probs=151.8
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh--CCEEEEeccccccCccCcccccccCCCCCCEEE--eeccccCC
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGG 95 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~--~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~sK~~~~g 95 (242)
+++++|++++++|++|.+.+ +++|.++|++| |+++|+||+|+ ++... .....+ .+|+++ ++|+++++
T Consensus 120 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~ 190 (352)
T 1iug_A 120 EGYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVGE--VALEAM--GVDAAASGSQKGLMCP 190 (352)
T ss_dssp SSCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTBC--CCSGGG--TCSEEEEESSSTTCCC
T ss_pred cCCcEEEEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCcc--eecccc--CeeEEEecCcccccCC
Confidence 67889999999999998776 89999999999 99999999996 32221 111222 356666 56988876
Q ss_pred ccchheeEeChhhhhccCC-------------C-CCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Q psy6548 96 LYPISAVLADDEVMGTLVP-------------G-THGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 96 ~~~~g~~~~~~~~~~~l~~-------------~-~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~ 159 (242)
.++|++++++++++.+.+ . .....++.+..++.++.++++.+.. ++..++++++++++.+.|
T Consensus 191 -~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L- 268 (352)
T 1iug_A 191 -PGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVG- 268 (352)
T ss_dssp -SCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH-
T ss_pred -CceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 678999999887665321 0 0122345667777777788887654 356778888999999999
Q ss_pred hhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----CCCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 160 SRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
++++-.... ....+.++++.++.. .+..++.+.|.++||.+.++ +.+.+|++++...+++++++++++|+++++
T Consensus 269 ~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 346 (352)
T 1iug_A 269 EEGGLRPVP-KRFSPAVAAFYLPEG-VPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLE 346 (352)
T ss_dssp HHTTCEESC-SSBCTTCEEEECCTT-CCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHCCCcccc-cccCCeEEEEEcCCC-CCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHH
Confidence 655311111 112567888888743 46788999999999999876 367999999888899999999999999988
Q ss_pred HH
Q psy6548 236 TM 237 (242)
Q Consensus 236 ~~ 237 (242)
++
T Consensus 347 ~~ 348 (352)
T 1iug_A 347 EI 348 (352)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 122
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.88 E-value=6.8e-21 Score=161.92 Aligned_cols=214 Identities=17% Similarity=0.205 Sum_probs=153.7
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG 89 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s 89 (242)
|+++ +...++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+.. ... .....+ .+|++++|
T Consensus 158 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~~--~~~~~~--~~di~~~s 228 (420)
T 1t3i_A 158 DLEHFKTLLSEKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQSAP-HYP--LDVQLI--DCDWLVAS 228 (420)
T ss_dssp CHHHHHHHCCTTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTTTT-TSC--CCHHHH--TCSEEEEE
T ss_pred CHHHHHHhhCCCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhccC-Ccc--Cchhhc--CCCEEEEe
Confidence 5565 4434568999999999999998776 899999999999999999999732 211 111222 36777755
Q ss_pred --ccccCCccchheeEeChhhhhccCCCCCCC--------------------CCCCCHHHHHHHHH-HHHHHHh---ccH
Q psy6548 90 --KALSGGLYPISAVLADDEVMGTLVPGTHGS--------------------TYGGNPLACKLAMT-ALDVILE---ENM 143 (242)
Q Consensus 90 --K~~~~g~~~~g~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~a~a-~l~~~~~---~~~ 143 (242)
|.++ + .++|++++++++++.+.+...++ ..+.+++.+.++.+ +++.+.. +++
T Consensus 229 ~sK~~~-~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (420)
T 1t3i_A 229 GHKMCA-P-TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENI 306 (420)
T ss_dssp GGGTTS-C-TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hhhhcC-C-CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHH
Confidence 9665 3 34899999999988887654322 12345555555444 6776654 456
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCeEe-----eeceeEEEEecCCchhHHHHHHHHHHCCceeccC-----------C-
Q psy6548 144 IENAYKMGEIFRSELRSRLSPDIVPVVR-----GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-----------S- 206 (242)
Q Consensus 144 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-----------~- 206 (242)
.++.+++++++++.| ++++. +....+ ..+.++++.++. .+..++.+.|.++||.+.++ +
T Consensus 307 ~~~~~~~~~~l~~~L-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~ 382 (420)
T 1t3i_A 307 HNYEVELTHYLWQGL-GQIPQ-LRLYGPNPKHGDRAALASFNVAG--LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDA 382 (420)
T ss_dssp HHHHHHHHHHHHHHH-HTCTT-EEEESCCGGGSCBCSEEEEEETT--BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHH-HhCCC-eEEeCCCccccccCCEEEEEECC--CCHHHHHHHHHHCCeEEeeccccchHHHHhcCC
Confidence 788888999999999 66532 111111 136677777764 35778899999999999886 2
Q ss_pred CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 207 NNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 207 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++.+|++++..++++++++++++|+++++.+.+
T Consensus 383 ~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 383 SGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 678999999888999999999999999887643
No 123
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.87 E-value=4.8e-21 Score=161.61 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=154.8
Q ss_pred Chhh--hcCC-CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 11 QVPA--KLKS-NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 11 d~~~--~~~~-~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
|+++ +.+. ++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++... ..... ..+|+++
T Consensus 121 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~--~~~d~~~ 191 (392)
T 2z9v_A 121 DPQAVADMLKAHPEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGMK--THPED--CKADIYV 191 (392)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBS--CCGGG--GTCSEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCcc--ccccc--ccceEEE
Confidence 5666 3343 457899999999999997776 8999999999999999999996 32221 11222 2357776
Q ss_pred --eeccccCCccchheeEeChhhhhccCCCC--------------------CCCCCCCCHHHHHHHHHHHHHHHh---cc
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPGT--------------------HGSTYGGNPLACKLAMTALDVILE---EN 142 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~~~~a~a~l~~~~~---~~ 142 (242)
++|+++++ .++|++++++++++.+.+.. .....+.+..++.++.++++.+.. ++
T Consensus 192 ~s~sK~~~~~-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 270 (392)
T 2z9v_A 192 TGPNKCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEA 270 (392)
T ss_dssp ECSSSTTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ecCcccccCC-CceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 56998876 67799999998877664210 011234456666666777776654 34
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCC-eE-eeeceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEEEecc
Q psy6548 143 MIENAYKMGEIFRSELRSRLSPDIVP-VV-RGKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIRLSPA 215 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR~~~~ 215 (242)
+.++++++++++++.| ++++-.... .. ...+.++++.++.. .+..++.+.|.++ ||.+.++ ..+++|+++.
T Consensus 271 ~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~ 348 (392)
T 2z9v_A 271 VWARHALTAKAMRAGV-TAMGLSVWAASDSIASPTTTAVRTPDG-VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHM 348 (392)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCCBSSSSGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHH-HHcCCeeccCCccccCCceEEEECCCC-CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCc
Confidence 6788888999999999 655321111 10 12467788888643 4678899999998 9999875 3689999964
Q ss_pred C-cCCHHHHHHHHHHHHHHHHHHh
Q psy6548 216 L-NITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 216 ~-~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
. .++++++++++++|+++++++.
T Consensus 349 ~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 349 GPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCHHHHHHHHHHHHHHHHHcC
Confidence 4 7899999999999999998764
No 124
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.87 E-value=2.9e-21 Score=163.12 Aligned_cols=212 Identities=14% Similarity=0.153 Sum_probs=153.5
Q ss_pred CChhh-hcCCCC-CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA-KLKSNP-NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~-~~~~~~-~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|+++ +...+. ++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ ++... .. .....+|+++
T Consensus 146 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~--~~--~~~~~~di~~ 216 (393)
T 1vjo_A 146 FSLEELRTALETHRPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVP--IF--LDAWGVDLAY 216 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSC--CC--TTTTTCSEEE
T ss_pred CCHHHHHHHHhhCCceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcC--Cc--ccccCccEEE
Confidence 45666 333233 7889999999999998776 7899999999999999999997 54321 12 2234568887
Q ss_pred --eeccccCCccchheeEeChhhhhccCCC-------CC------------CCCC-CCCHHHHHHHHHHHHHHHh---cc
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPG-------TH------------GSTY-GGNPLACKLAMTALDVILE---EN 142 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~-------~~------------~~~~-~~~~~~~~~a~a~l~~~~~---~~ 142 (242)
++|+++++ .++|++++++++++.+... .. ...+ +.+++++.++.++++.+.. ++
T Consensus 217 ~s~sK~l~~~-~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~ 295 (393)
T 1vjo_A 217 SCSQKGLGCS-PGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLAN 295 (393)
T ss_dssp CCSSSTTCSC-SSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred EcCcccccCC-CceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHH
Confidence 45999977 5899999999888776321 11 1233 5678888888888887644 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCeEee--eceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEEEec-
Q psy6548 143 MIENAYKMGEIFRSELRSRLSPDIVPVVRG--KGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIRLSP- 214 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR~~~- 214 (242)
+.++++++++++++.| ++++-.+. .+.+ .+.++++.++.. .+..++.+.|.++ ||.+.++ .++.+|+++
T Consensus 296 ~~~~~~~~~~~l~~~L-~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~ 372 (393)
T 1vjo_A 296 CWQRHQKNVEYLWERL-EDIGLSLH-VEKEYRLPTLTTVCIPDG-VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLM 372 (393)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCCBS-SCGGGBCSSEEEEECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHH-HHcCCccc-CCccccCCcEEEEEcCCC-CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCC
Confidence 6788899999999999 65532111 1111 235677777643 4678899999988 9999875 368999995
Q ss_pred cCcCCHHHHHHHHHHHHHHH
Q psy6548 215 ALNITEQELREGLDIIINTI 234 (242)
Q Consensus 215 ~~~~t~e~i~~~~~~l~~~l 234 (242)
++..+++++++++++|++++
T Consensus 373 ~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 373 GFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp GGGCSHHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHh
Confidence 45567778999999998875
No 125
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.87 E-value=2.1e-20 Score=157.03 Aligned_cols=215 Identities=16% Similarity=0.158 Sum_probs=150.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhC--CEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN--VLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~--~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
|+++ +...+.++++|++++++|++|.+.+ +++|.++|++|| +++|+||+|+ ++.. ..... ...+|+++
T Consensus 128 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~--~~~~~--~~~~di~~ 198 (384)
T 1eg5_A 128 KLEELEKLVDEDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKI--PFSLE--KLEVDYAS 198 (384)
T ss_dssp CHHHHHHHCCTTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTS--CCCCT--TTCCSEEE
T ss_pred CHHHHHHHhCCCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCc--ccCch--hcCCCEEE
Confidence 5566 4333458999999999999997776 899999999999 9999999996 4322 11222 22467877
Q ss_pred ee--ccccCCccchheeEeChhh--hhccCCCC---CCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Q psy6548 88 LG--KALSGGLYPISAVLADDEV--MGTLVPGT---HGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 88 ~s--K~~~~g~~~~g~~~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l 158 (242)
+| |.++. .++||+++++++ ...+.... ...+++.+++++.++.++++.+.+ +++.++++++++++.+.|
T Consensus 199 ~s~sK~~g~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 199 FSAHKFHGP--KGVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp EEGGGGTSC--TTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ecHHHhcCC--CceEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 55 98772 126999998775 32332211 123456788888888888887543 456788888999999999
Q ss_pred HhhcCCCCCCeEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------------CCEEEEec
Q psy6548 159 RSRLSPDIVPVVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-----------------------NNIIRLSP 214 (242)
Q Consensus 159 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lR~~~ 214 (242)
+..+-....... ..+.++++.++. .+..++.+.|.++||.+.++. .+++|+++
T Consensus 277 -~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 353 (384)
T 1eg5_A 277 -MNLGAHIITPLEISLPNTLSVSFPN--IRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISL 353 (384)
T ss_dssp -HTTTCEECSCTTSBCTTEEEEECTT--CCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEEC
T ss_pred -CCCCeEEeCCcccCCCCEEEEEeCC--CCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEEC
Confidence 553211111001 134566777764 357889999999999998741 36899998
Q ss_pred cCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 215 ALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 215 ~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
+..++++++++++++|+++++++.+
T Consensus 354 ~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 354 CKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999987644
No 126
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=1.2e-20 Score=159.95 Aligned_cols=214 Identities=13% Similarity=0.084 Sum_probs=151.5
Q ss_pred ccccCCC------Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccc
Q psy6548 4 QFPVKSK------QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAI 76 (242)
Q Consensus 4 ~~~~~~~------d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~ 76 (242)
+..+|.+ |+++ +...++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++... +..
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~ 213 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL--LDI 213 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC--CCH
T ss_pred EEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC--CCc
Confidence 3455655 6666 4444568999999999999997776 7899999999999999999996 22111 112
Q ss_pred ccCCCCCCEEE--eeccccCCccchh-eeEeChhhhhccCCCCCC---------CCCCCCHHHHHHHHHHHHHHHh----
Q psy6548 77 HYEDVRPDIVI--LGKALSGGLYPIS-AVLADDEVMGTLVPGTHG---------STYGGNPLACKLAMTALDVILE---- 140 (242)
Q Consensus 77 ~~~~~~~~~~~--~sK~~~~g~~~~g-~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~a~a~l~~~~~---- 140 (242)
..+ .+|+++ ++|.+++ ++| ++++++++++.+.+.... ...+.++.+++++.++++.+..
T Consensus 214 ~~~--~~d~~~~s~~K~~g~---~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~ 288 (406)
T 3cai_A 214 RET--DADVVTVNAHAWGGP---PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDES 288 (406)
T ss_dssp HHH--CCSEEEEEGGGGTSC---SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTT
T ss_pred hhc--CCCEEEeehhhhcCC---CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccc
Confidence 222 357666 5698763 388 999999988888765321 1234566777666777776653
Q ss_pred -------------ccHHHHHHHHHHHHHHHHHhhcCCC-CCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC
Q psy6548 141 -------------ENMIENAYKMGEIFRSELRSRLSPD-IVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS 206 (242)
Q Consensus 141 -------------~~~~~~~~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 206 (242)
+++.++.+++++++.+.| +.++.. +.......+.++++.++. .+..++.+.|.++||.+.++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~~~gi~v~~g~ 365 (406)
T 3cai_A 289 ARGSRRERLAVSMQSADAYLNRVFDYLMVSL-RSLPLVMLIGRPEAQIPVVSFAVHK--VPADRVVQRLADNGILAIANT 365 (406)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCTTEEECCCCSSBCSEEEEEETT--BCHHHHHHHHHHTTEECEECC
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHHHH-hcCCCeEEcCCccccCCEEEEEECC--cCHHHHHHHHHHCCcEEecCC
Confidence 345677778888888888 555321 111111124467787764 357889999999999998753
Q ss_pred -------------CCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 207 -------------NNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 207 -------------~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
.+.+|++++..++++++++++++|++
T Consensus 366 ~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 366 GSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp SCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 47899999988899999999999865
No 127
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.87 E-value=3.7e-21 Score=168.99 Aligned_cols=222 Identities=13% Similarity=0.065 Sum_probs=147.5
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHH-hhCCEEEEeccccccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCS-QYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~-~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...++++++|+++.++|++|. +.+.+.+++|+++|+ +||+++|+||+|.++...+........+....+.+|
T Consensus 233 d~~~l~~~l~~~~k~v~l~~p~NPtG~-~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~ 311 (533)
T 3f6t_A 233 EPNEIEKLKDPSIKALIVVNPTNPTSK-EFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSY 311 (533)
T ss_dssp CHHHHHHHSCTTEEEEEEESSCTTTCB-CCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEES
T ss_pred CHHHHHHHhCCCCeEEEEeCCCCCCcc-ccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecC
Confidence 4555 4444568999999888999995 556778999999999 699999999999877543322211111122234458
Q ss_pred ecccc-CCccchheeEeChh-----hhhcc--------------------------------CCCCCCCCCCCCHHHHHH
Q psy6548 89 GKALS-GGLYPISAVLADDE-----VMGTL--------------------------------VPGTHGSTYGGNPLACKL 130 (242)
Q Consensus 89 sK~~~-~g~~~~g~~~~~~~-----~~~~l--------------------------------~~~~~~~~~~~~~~~~~~ 130 (242)
||.+| +| +|+||++++++ +++.+ .......+.+.+++++.+
T Consensus 312 SK~~g~~G-~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a 390 (533)
T 3f6t_A 312 SKLFGCTG-WRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIM 390 (533)
T ss_dssp HHHHTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHH
T ss_pred cccCCCcc-cceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHH
Confidence 99998 88 99999998876 54443 233334445566666665
Q ss_pred ----HHHHHH------HH--HhccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCc-------------
Q psy6548 131 ----AMTALD------VI--LEENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSI------------- 185 (242)
Q Consensus 131 ----a~a~l~------~~--~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~------------- 185 (242)
+.+++. .. ..+...+.++++++.+.+.| . ++ +....+..+++.|+.++...
T Consensus 391 ~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L-~-~~--~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~ 466 (533)
T 3f6t_A 391 EALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAM-Q-AP--KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLT 466 (533)
T ss_dssp HHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHH-T-CC--CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhc-C-CC--ccccCCCceEEEEEehHhhhhhccchHHHHHhh
Confidence 333331 00 01234566677777777777 4 43 22233456788888876310
Q ss_pred --hhHHHHHHHHH-HCCceeccC-----CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 186 --LEVYDVCIKMK-DAGLVTKPI-----SNNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 186 --~~~~~~~~~l~-~~gi~~~~~-----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
.+..++..++. ++||.+.|+ +.+++|+++.. .+++++++++++|.++++++.+
T Consensus 467 ~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 467 NNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN-LPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee-CCHHHHHHHHHHHHHHHHHHHH
Confidence 13445555554 779999886 36899999633 5899999999999999988654
No 128
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.87 E-value=3.6e-20 Score=157.81 Aligned_cols=213 Identities=14% Similarity=0.185 Sum_probs=152.0
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG 89 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s 89 (242)
|+++ +...+.++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+. +.. .. ......+|++++|
T Consensus 152 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~--~~--~~~~~~~di~~~s 222 (423)
T 3lvm_A 152 DLKELEAAMRDDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV-GKL--PI--DLSQLKVDLMSFS 222 (423)
T ss_dssp CHHHHHHHCCTTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT-TTS--CC--CTTTSCCSEEEEE
T ss_pred CHHHHHHhcCCCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc-CCC--Cc--ChhhcCCCEEEec
Confidence 6777 4444568999999999999997776 89999999999999999999863 111 11 2223356888755
Q ss_pred --ccccCCccchheeEeChhhhhccCCCCCC-------CCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Q psy6548 90 --KALSGGLYPISAVLADDEVMGTLVPGTHG-------STYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 90 --K~~~~g~~~~g~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l 158 (242)
|.++ + .++|+++++++.++.+.+...+ ...+.++.+++++.++++.+.. +++.++.+++++++++.|
T Consensus 223 ~sK~~g-~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 300 (423)
T 3lvm_A 223 GHKIYG-P-KGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGI 300 (423)
T ss_dssp STTTTS-C-SSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhcC-C-CCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9665 3 4589999998887777764332 2334566777777677776654 567788888889999988
Q ss_pred HhhcCCC-CCC-eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------------CCEEEEe
Q psy6548 159 RSRLSPD-IVP-VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-----------------------NNIIRLS 213 (242)
Q Consensus 159 ~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lR~~ 213 (242)
+.++.. ... .....+.++.+.+.. .+..++.+.|.+ +.+.++. .+.+|++
T Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 375 (423)
T 3lvm_A 301 -KDIEEVYLNGDLEHGAPNILNVSFNY--VEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFS 375 (423)
T ss_dssp -TTSTTEEEESCSTTBCTTEEEEEETT--SCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEE
T ss_pred -hcCCCEEEeCCccccCCCeEEEEeCC--CCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEE
Confidence 666321 111 001123456666644 467788888876 7776542 3889999
Q ss_pred ccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 214 PALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 214 ~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++..++++++++++++|+++++++.+
T Consensus 376 ~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 376 LGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 99899999999999999999988654
No 129
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.87 E-value=9.4e-22 Score=167.37 Aligned_cols=205 Identities=12% Similarity=0.156 Sum_probs=144.5
Q ss_pred CEEEEEEccc-ccCCCcccCCHHHHHHHHHHHH------hhCCEEEEeccccccCccCcc---cccccCCCCCC---EE-
Q psy6548 21 NICAFMVEPI-QGEAGAVVPDDGYLKKVRALCS------QYNVLFIADEVQTGLGRTGKL---LAIHYEDVRPD---IV- 86 (242)
Q Consensus 21 ~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~------~~~~~li~De~~~~~~~~g~~---~~~~~~~~~~~---~~- 86 (242)
...+++++++ +|++|. +.+.+.+++|+++|+ +||+++|+||+|.+|+..+.. +.....++.++ ++
T Consensus 178 ~~~~vi~~~p~~NPtG~-~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 178 DRIASLINSPGNNPTGY-SLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp SEEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred CCEEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 3447888877 899995 556677999999999 899999999999988766542 12122234445 22
Q ss_pred -Eeecccc-CCccchheeEe---ChhhhhccCCCCCC---CC-CCCCHHHHHHHHHHHHHHH-----h--ccHHHHHHHH
Q psy6548 87 -ILGKALS-GGLYPISAVLA---DDEVMGTLVPGTHG---ST-YGGNPLACKLAMTALDVIL-----E--ENMIENAYKM 150 (242)
Q Consensus 87 -~~sK~~~-~g~~~~g~~~~---~~~~~~~l~~~~~~---~~-~~~~~~~~~~a~a~l~~~~-----~--~~~~~~~~~~ 150 (242)
++||+++ +| +|+||+++ ++++++.+...... .+ ...+.+++.++.++++... . +.+.+.++++
T Consensus 257 ~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 335 (413)
T 3t18_A 257 FSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSR 335 (413)
T ss_dssp EEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 4889999 89 99999998 88888877653211 12 2467777777766655321 1 2456777888
Q ss_pred HHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 151 GEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 151 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
++.+.+.| +.++ +....+..++++|+... +..++.+.|.++||.+.|+ ++++|++++.. +++++ +++|
T Consensus 336 ~~~l~~~l-~~~g--~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gv~v~~g-~~~iRis~~~~-~~~~~---l~~l 403 (413)
T 3t18_A 336 ADVFVTAA-KENK--LTMIPYFGGFFTFIPTD----KAFDIVKDLEKENIFTIPS-AKGIRVAICGV-GEEKI---PKLV 403 (413)
T ss_dssp HHHHHHHH-HHTT--CCCBCCCSSSCEEEECS----CHHHHHHHHHHTTEECEEC-SSEEEECTTTS-CGGGH---HHHH
T ss_pred HHHHHHHH-HHcC--CCccCCCceEEEEeCCC----CHHHHHHHHHhCCEEEecC-CCceEEEEeeC-CHHHH---HHHH
Confidence 88888888 6553 22223445667777652 4678889999999999997 78999997744 55555 8888
Q ss_pred HHHHHHHhh
Q psy6548 231 INTINTMAA 239 (242)
Q Consensus 231 ~~~l~~~~~ 239 (242)
.++++++.+
T Consensus 404 ~~~l~~~~~ 412 (413)
T 3t18_A 404 QRLAFYTNK 412 (413)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 888887653
No 130
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.86 E-value=3.4e-22 Score=169.96 Aligned_cols=204 Identities=13% Similarity=0.121 Sum_probs=142.9
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC---cccccccCC-CCCC---EEEeeccc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG---KLLAIHYED-VRPD---IVILGKAL 92 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~~-~~~~---~~~~sK~~ 92 (242)
.++.+++++.++|++|. +++.+++++|+++|++||+++|+||+|.+++..| .......+. ...+ +.++||++
T Consensus 182 ~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 260 (412)
T 1ajs_A 182 EFSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF 260 (412)
T ss_dssp TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS
T ss_pred CCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEeccccc
Confidence 36788888999999985 6778899999999999999999999999886654 222222111 1222 33489999
Q ss_pred cC-CccchheeEe---Chh----hhhccCCCCCCCCCC-CCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHH
Q psy6548 93 SG-GLYPISAVLA---DDE----VMGTLVPGTHGSTYG-GNPLACKLAMTALDVIL--------EENMIENAYKMGEIFR 155 (242)
Q Consensus 93 ~~-g~~~~g~~~~---~~~----~~~~l~~~~~~~~~~-~~~~~~~~a~a~l~~~~--------~~~~~~~~~~~~~~l~ 155 (242)
+. | +|+||+++ +++ +++.+... ...++. .+++++.++.++++... .++..++++++++++.
T Consensus 261 ~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (412)
T 1ajs_A 261 GLYN-ERVGNLTVVAKEPDSILRVLSQMQKI-VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELR 338 (412)
T ss_dssp CCGG-GCEEEEEEECSSHHHHHHHHHHHHHH-HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-cceEEEEEecCCHHHHHHHHHHHHHH-HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 95 9 99999998 776 33333321 223444 47888888888887542 1456778888899999
Q ss_pred HHHHhhcC-C-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 156 SELRSRLS-P-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 156 ~~l~~~l~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+.| +.++ . .+....+..+++.|+.++ .+.+.+.+.++||.+.++ +|++++. .+++++++++++|+++
T Consensus 339 ~~L-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gv~v~~~----~Ris~~~-~~~~~i~~~~~~l~~~ 407 (412)
T 1ajs_A 339 ARL-EALKTPGTWNHITDQIGMFSFTGLN-----PKQVEYLINQKHIYLLPS----GRINMCG-LTTKNLDYVATSIHEA 407 (412)
T ss_dssp HHH-HHTTCSSCCHHHHHCCSSEEECCCC-----HHHHHHHHHTTCEECCTT----SEEEGGG-CCTTTHHHHHHHHHHH
T ss_pred HHH-HhhCCCCCeeEEcCCCceEEEeCCC-----HHHHHHHHHhCCEEecCC----cEEEeee-CCHHHHHHHHHHHHHH
Confidence 999 6654 1 122222345666665432 344555666889999875 5999764 4899999999999999
Q ss_pred HHHH
Q psy6548 234 INTM 237 (242)
Q Consensus 234 l~~~ 237 (242)
++++
T Consensus 408 l~~~ 411 (412)
T 1ajs_A 408 VTKI 411 (412)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8764
No 131
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.86 E-value=7.3e-21 Score=158.39 Aligned_cols=201 Identities=13% Similarity=0.103 Sum_probs=145.4
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCC---EEEeecccc-CC
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPD---IVILGKALS-GG 95 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~---~~~~sK~~~-~g 95 (242)
+++++++++.++|++|.+.+ .+.+++|+++|+++ ++|+||+|.+++..+.... ...+.... +.++||+++ +|
T Consensus 128 ~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~~G 203 (350)
T 3fkd_A 128 SNMDFCWLCNPNNPDGRLLQ-RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRP-ADIKGRKNLVMVYSFSHAYGIPG 203 (350)
T ss_dssp TTCSEEEEESSCTTTCCCCC-HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCG-GGGTTCSSEEEEEESHHHHSCGG
T ss_pred CCCCEEEEeCCCCCcCCCCC-HHHHHHHHHhCCCC--EEEEECchhhhccCcchhh-HHhhcCCCEEEEecCchhccCcc
Confidence 67888999999999996655 45566666666554 9999999988765543211 11122222 334889999 88
Q ss_pred ccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeee
Q psy6548 96 LYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--EENMIENAYKMGEIFRSELRSRLSPDIVPVVRGK 173 (242)
Q Consensus 96 ~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 173 (242)
+|+||+++++++++.+.... .+++.+++++.++.++++... .+...+ ..++++++.+.| +.++. ....++.
T Consensus 204 -~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~L-~~~~~--~~~~~~~ 276 (350)
T 3fkd_A 204 -LRIGYIVANKDFMKRVAAFS--TPWAVNALAIEAAKFILIHPAQFTLPIRK-WQRNTVDFITAL-NRLDG--VEVHPSG 276 (350)
T ss_dssp -GCCEEEECCHHHHHHHHTTC--CTTCSCHHHHHHHHHHHHCTTTTCCCHHH-HHHHHHHHHHHH-HHSTT--EEECCCS
T ss_pred -hheEeEEeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHHhCHHHHHHHHHH-HHHHHHHHHHHH-hcCCC--cEECCCC
Confidence 99999999999998887643 456788888888888877543 123333 448888888888 66632 1123455
Q ss_pred ceeEEEEecCCchhHHHHHHHHHH-CCceeccCC------CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 174 GLLNAIVLDKSILEVYDVCIKMKD-AGLVTKPIS------NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~l~~-~gi~~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+.++++.++.. +..++.+.|.+ +||.+.++. .+++|+++ .++++++++++.|+++.++
T Consensus 277 ~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~---~~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 277 TTFFLLRLKKG--TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITT---QRPAQNQLFIKALETFLEK 341 (350)
T ss_dssp SSEEEEEESSS--CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEECCCC--CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEc---CCHHHHHHHHHHHHHHHHH
Confidence 77888888764 67889999999 999998752 67999993 3888999999999887765
No 132
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.3e-20 Score=155.84 Aligned_cols=195 Identities=13% Similarity=0.112 Sum_probs=139.2
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeecccc-CCccc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GGLYP 98 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~-~g~~~ 98 (242)
.++++++++.++|++|.+.+ ++++.++|++++. +|+||+|.+|+..+.. .....+....+.++||.++ +| +|
T Consensus 134 ~~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G-~r 206 (337)
T 3p1t_A 134 SRDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAG-LR 206 (337)
T ss_dssp CTTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTT-TC
T ss_pred cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcc-hh
Confidence 46789999999999997776 7778889999997 5669999877544321 1111111112334889998 89 99
Q ss_pred hheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeE
Q psy6548 99 ISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLN 177 (242)
Q Consensus 99 ~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~ 177 (242)
+||+++++++++.+.+. ...++.+++++.++.++++.... ++..+++.++++++.+.| +.++ + ...++.+.++
T Consensus 207 ~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L-~~~g--~-~~~~~~~~~~ 280 (337)
T 3p1t_A 207 LGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADAL-RGLG--Y-RVASSEANFV 280 (337)
T ss_dssp CEEEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH-HHTT--C-CBCCCSSSEE
T ss_pred eEEEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH-HHCc--C-EECCCCCeEE
Confidence 99999999999888763 34556778888777777664321 334566677788888888 6654 2 1223445677
Q ss_pred EEEecCCchhHHHHHHHHHHCCceeccCC----CCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 178 AIVLDKSILEVYDVCIKMKDAGLVTKPIS----NNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 178 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
++..+.. ..+.+.|.++||.+.++. ++++|++++ ++++++++++.|+++.
T Consensus 281 ~~~~~~~----~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 281 LVENAAG----ERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp EEECTTT----HHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred EEEcCCH----HHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 7776543 567788999999998763 589999943 7899999999998764
No 133
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.86 E-value=4.6e-21 Score=158.80 Aligned_cols=195 Identities=12% Similarity=0.079 Sum_probs=139.0
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccc-cccCCCCCCEEEeecccc-CCcc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-IHYEDVRPDIVILGKALS-GGLY 97 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~~~~sK~~~-~g~~ 97 (242)
+++++|+++.++|++|.+. +.+.+++++++| | ++|+||+|+++... .... .+..+....+.++||+++ +| +
T Consensus 137 ~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~---~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G-~ 209 (335)
T 1uu1_A 137 GEGDVVFIPNPNNPTGHVF-EREEIERILKTG---A-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAA-Q 209 (335)
T ss_dssp CTTEEEEEESSCTTTCCCC-CHHHHHHHHHTT---C-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGG-G
T ss_pred CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhC---C-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcc-c
Confidence 4678888777789999655 555555555554 8 89999999876421 1111 122222223345899998 89 9
Q ss_pred chheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeecee
Q psy6548 98 PISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL-EENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLL 176 (242)
Q Consensus 98 ~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ 176 (242)
|+||+++++++++.+.+. ..+++.+++++.++.++++..+ .++..++++++++++.+.| +.++ +.. .+..+++
T Consensus 210 r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L-~~~g--~~~-~~~~~~~ 283 (335)
T 1uu1_A 210 RVGYVVASEKFIDAYNRV--RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSAL-REMG--YRI-TDSRGNF 283 (335)
T ss_dssp CCEEEEECHHHHHHHHHH--SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-HHHT--CCB-CCCCSSE
T ss_pred CeEEEEeCHHHHHHHHHh--cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH-HHCC--cEE-cCCCCeE
Confidence 999999999988877652 2346788899888888887532 2446677888889999999 5553 211 2345678
Q ss_pred EEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 177 NAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+|+.++. .+..++.+.|.++||.+.+ .++++|+++ .+++++++++++|+++
T Consensus 284 ~~~~~~~--~~~~~~~~~l~~~gi~v~~-~~~~iRis~---~~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 284 VFVFMEK--EEKERLLEHLRTKNVAVRS-FREGVRITI---GKREENDMILRELEVF 334 (335)
T ss_dssp EEEECCT--HHHHHHHHHHHHHTEEEEE-ETTEEEEEC---CCHHHHHHHHHHHHCC
T ss_pred EEEECCC--CCHHHHHHHHHHCCEEEEE-CCCeEEEEe---CCHHHHHHHHHHHHhh
Confidence 8888865 4677899999999999998 478999995 3578899999998753
No 134
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.86 E-value=3.3e-20 Score=155.44 Aligned_cols=212 Identities=12% Similarity=0.139 Sum_probs=148.2
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI-- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~-- 87 (242)
|+++ +...++++++|++++++|++|.+.+ +++|.++|++||+ +|+|++|+ ++.. ......+ ..|+++
T Consensus 127 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~-~~~~--~~~~~~~--~~d~~~~s 196 (382)
T 4hvk_A 127 DVSFIDQKLRDDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS-VGQI--EVDVEKI--GADMLTIS 196 (382)
T ss_dssp CHHHHHHHCCTTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT-BTTB--CCCHHHH--TCSEEEEE
T ss_pred CHHHHHHHhccCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh-cCCC--CCCchhc--CCCEEEEe
Confidence 5666 4444568999999999999997776 8899999999999 99999986 2111 1111222 346666
Q ss_pred eeccccCCccchheeEeChhhhhccCCCCCCC-------CCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Q psy6548 88 LGKALSGGLYPISAVLADDEVMGTLVPGTHGS-------TYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 88 ~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l 158 (242)
++|.++ + .++|+++++++. .+.+...++ ..+.+..++.++.++++.+.. +++.++.+++++++++.|
T Consensus 197 ~~K~~g-~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 272 (382)
T 4hvk_A 197 SNDIYG-P-KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNV 272 (382)
T ss_dssp SGGGTS-C-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-C-CceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 569765 3 457888776654 333332211 234466777777777775543 456788888889999988
Q ss_pred HhhcCCC-CCC-eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------------CCEEEEe
Q psy6548 159 RSRLSPD-IVP-VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-----------------------NNIIRLS 213 (242)
Q Consensus 159 ~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lR~~ 213 (242)
+.++.. ... .....+.++++.++. .+..++.+.|.++||.++++. .+.+|++
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~ 349 (382)
T 4hvk_A 273 -LKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLT 349 (382)
T ss_dssp -TTSTTEEECSCSSSBCTTEEEEEETT--CCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEE
T ss_pred -hcCCCeEEeCCccccCCCEEEEEECC--CCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEE
Confidence 665421 111 111123466777765 367889999999999998752 5789999
Q ss_pred ccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 214 PALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 214 ~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++..++++++++++++|+++++++.+
T Consensus 350 ~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 350 LGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99889999999999999999988754
No 135
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=1.5e-20 Score=158.74 Aligned_cols=216 Identities=16% Similarity=0.136 Sum_probs=153.0
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|+++ +.+.++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|. ++.. ..... ...+|+++
T Consensus 130 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~~~ 200 (396)
T 2ch1_A 130 FSLETLARAIELHQPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDAVY 200 (396)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCEEE
Confidence 45555 3333336889999999999997776 8899999999999999999997 4322 11222 23467777
Q ss_pred e--eccccCCccchheeEeChhhhhccCCCC-----------------------CCCCCCCCHHHHHHHHHHHHHHHh--
Q psy6548 88 L--GKALSGGLYPISAVLADDEVMGTLVPGT-----------------------HGSTYGGNPLACKLAMTALDVILE-- 140 (242)
Q Consensus 88 ~--sK~~~~g~~~~g~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~a~a~l~~~~~-- 140 (242)
+ +|+++++ .++|++++++++++.+.... ....++.+..++.++.++++.+..
T Consensus 201 ~s~~K~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 279 (396)
T 2ch1_A 201 TGAQKVLGAP-PGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEG 279 (396)
T ss_dssp CCCC-CCCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_pred EcCCccccCC-CCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 4 5999877 67899999988877653210 111234566677777778887543
Q ss_pred -ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEe---eeceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEE
Q psy6548 141 -ENMIENAYKMGEIFRSELRSRLSPDIVPVVR---GKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIR 211 (242)
Q Consensus 141 -~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR 211 (242)
++..++++++++++.+.| ++++-.... .. ..+.++++.++.. .+..++.++|.++ ||.+.++ .++.+|
T Consensus 280 ~~~~~~~~~~~~~~l~~~L-~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iR 356 (396)
T 2ch1_A 280 LENQIKRRIECAQILYEGL-GKMGLDIFV-KDPRHRLPTVTGIMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWR 356 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHTCCBSS-CSGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHH-HHCCCeecc-CCccccCCceEEEEcCCC-CCHHHHHHHHHHhCCEEEecCccccCCCEEE
Confidence 346788888999999999 665421111 11 1234778887643 4678899999876 9999875 467999
Q ss_pred Eec-cCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 212 LSP-ALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 212 ~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+++ ++..+++++++++++|+++++++.
T Consensus 357 i~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 357 VGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp EECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 998 456689999999999999998764
No 136
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.86 E-value=1.6e-20 Score=164.22 Aligned_cols=225 Identities=13% Similarity=0.065 Sum_probs=152.0
Q ss_pred ccccCCC-----Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCc-----cCc
Q psy6548 4 QFPVKSK-----QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR-----TGK 72 (242)
Q Consensus 4 ~~~~~~~-----d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~-----~g~ 72 (242)
++.+|.+ |+++ +...+.++++|++++++|++|.+.+ +++|+++|++||+++|+||+|.++.. .|.
T Consensus 216 v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~ 291 (514)
T 3mad_A 216 LVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGY 291 (514)
T ss_dssp EEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTC
T ss_pred eEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCC
Confidence 4456665 6777 4444568999999999999997765 89999999999999999999987522 222
Q ss_pred ---ccccccCCCCCCEEE--eeccccCCccchheeEeChhhhhccCCCC----C-----CC--CCCCCHHHHHHHHHHHH
Q psy6548 73 ---LLAIHYEDVRPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPGT----H-----GS--TYGGNPLACKLAMTALD 136 (242)
Q Consensus 73 ---~~~~~~~~~~~~~~~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~~----~-----~~--~~~~~~~~~~~a~a~l~ 136 (242)
.+.....+ .|+++ ++|++.+| .++|+++.+++......... . .. ..+.+.....+++++++
T Consensus 292 ~~~~~~~~~~g--~d~~~~s~~K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~ 368 (514)
T 3mad_A 292 PVPPFDFRLEG--VTSVSADTHKYGYGA-KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAML 368 (514)
T ss_dssp CCCCCSTTSTT--CCEEEECTTTTTCCC-SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHH
T ss_pred CCCcccccCCC--CcEEEECchhccCCC-CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHH
Confidence 12222233 36666 55998888 89999988766544322110 0 01 11223333444555555
Q ss_pred HHHh---ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-CCCEEEE
Q psy6548 137 VILE---ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-SNNIIRL 212 (242)
Q Consensus 137 ~~~~---~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-~~~~lR~ 212 (242)
.+.. +++.++.+++++++++.| ++++...... +. ..++++.... .+..++.+.|.++||.+... .++.+|+
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~g~~~~~-~~-~~~~~~~~~~--~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri 443 (514)
T 3mad_A 369 SLGEEGYLDATRRILQAADRLKAGV-RAIPSLKILG-DP-LWVIAVASDE--LNIYQVMEEMAGRGWRLNGLHRPPAFHV 443 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTSTTCEESS-CC-SSEEEEECSS--SCHHHHHHHHHTTTCBCEEETTTTEEEE
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH-hhCCCeEEeC-CC-eEEEEEeCCC--CCHHHHHHHHHhcCCEeccCCCCCeEEE
Confidence 5443 456788888999999999 6654211111 11 3466666543 46788999999999988432 3678999
Q ss_pred ecc-CcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 213 SPA-LNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 213 ~~~-~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
++. ...+++++++++++|+++++++.++
T Consensus 444 ~~~~~~~~~e~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 444 ALTLRHTEPGVVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp ECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 976 4446699999999999999887653
No 137
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.86 E-value=6e-21 Score=158.56 Aligned_cols=218 Identities=13% Similarity=0.174 Sum_probs=146.5
Q ss_pred Chhh--hcCCC-----CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc--cCccCcccccccCCC
Q psy6548 11 QVPA--KLKSN-----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--LGRTGKLLAIHYEDV 81 (242)
Q Consensus 11 d~~~--~~~~~-----~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~--~~~~g~~~~~~~~~~ 81 (242)
|+++ +.+.+ +++++|++++++|++|+.+.+.+.+++|+++|++||+++|+||+|.. +...+... .....
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~ 192 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPV--KEYAG 192 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCH--HHHHH
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCCh--HHhcc
Confidence 5666 44443 27999999999999944666778899999999999999999998741 11112111 11111
Q ss_pred CCCE--EEeeccccCCccchh-eeEeChhhhhccCCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 82 RPDI--VILGKALSGGLYPIS-AVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 82 ~~~~--~~~sK~~~~g~~~~g-~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
..|. +++||+++++ +| ++++++++++.+... ..+.+...+.+.++++..+++... +. .++..++++.+++
T Consensus 193 ~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~l~~ 267 (347)
T 1jg8_A 193 YADSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DR-LKEDHENARFLAL 267 (347)
T ss_dssp TCSEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TT-HHHHHHHHHHHHH
T ss_pred cccEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHH
Confidence 2243 3489999854 56 466788777665431 122333345555555555665321 22 3444567788888
Q ss_pred HHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 157 ELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 157 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.| ++++..+. ..+..+.++|+.++....+..++.++|.++||.+++.+.+.+|++++...+++++++++++|++++++
T Consensus 268 ~L-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 268 KL-KEIGYSVN-PEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HH-HHHTCBCC-GGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HH-HhcCceec-cCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 89 55532111 12345677888887422467889999999999999877789999998888999999999999998865
Q ss_pred H
Q psy6548 237 M 237 (242)
Q Consensus 237 ~ 237 (242)
+
T Consensus 346 ~ 346 (347)
T 1jg8_A 346 F 346 (347)
T ss_dssp H
T ss_pred c
Confidence 3
No 138
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.85 E-value=3.7e-21 Score=167.83 Aligned_cols=213 Identities=12% Similarity=0.055 Sum_probs=145.4
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc--cccc----ccCCC---CCCEE---Ee
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK--LLAI----HYEDV---RPDIV---IL 88 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~----~~~~~---~~~~~---~~ 88 (242)
++++|+++.++|++|. +.+.+.+++|+++|++||+++|+||+|.++...+. ...+ ..++. ..+++ ++
T Consensus 237 ~~k~ivl~~p~NPtG~-~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~ 315 (500)
T 3tcm_A 237 NVRALVVINPGNPTGQ-VLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSV 315 (500)
T ss_dssp EEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEES
T ss_pred CceEEEEECCCCCCcc-cCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecC
Confidence 7888888888999995 55678899999999999999999999987543221 1111 11211 12233 48
Q ss_pred eccc-c-CCccchheeEe---ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHHH
Q psy6548 89 GKAL-S-GGLYPISAVLA---DDEVMGTLVPGTHGSTYGGNPLACKLAMTALD-----------VILE-ENMIENAYKMG 151 (242)
Q Consensus 89 sK~~-~-~g~~~~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~-----------~~~~-~~~~~~~~~~~ 151 (242)
||+| | +| +|+||+++ ++++++.+.... ...++.+++++.++..+++ ..+. +.+.+.+++++
T Consensus 316 SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 393 (500)
T 3tcm_A 316 SKGYYGECG-KRGGYFEITGFSAPVREQIYKIA-SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRA 393 (500)
T ss_dssp SSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHH-HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCc-cceEEEEEeCCCHHHHHHHHHHH-hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999 5 68 99999987 888887776432 2345567777777666654 2222 44667788889
Q ss_pred HHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCch-----------hHHHH-HHHHHHCCceeccC-------CCCEEEE
Q psy6548 152 EIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSIL-----------EVYDV-CIKMKDAGLVTKPI-------SNNIIRL 212 (242)
Q Consensus 152 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~l~~~gi~~~~~-------~~~~lR~ 212 (242)
+.+++.| +.++. +....+..+++.|+.+..+.. ....+ .+.|.++||.+.|+ +.+++|+
T Consensus 394 ~~l~~~L-~~~~g-~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRi 471 (500)
T 3tcm_A 394 KALEHAF-NKLEG-ITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRC 471 (500)
T ss_dssp HHHHHHH-HTSTT-EECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEE
T ss_pred HHHHHHH-hcCCC-cEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEE
Confidence 9999999 66632 222233456677755443211 12223 35566779999864 3457999
Q ss_pred eccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 213 SPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 213 ~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
++. .+++++++++++|+++++++.++
T Consensus 472 s~~--~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 472 TIL--PQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp ESC--SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 966 79999999999999999887653
No 139
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.85 E-value=1.3e-20 Score=158.93 Aligned_cols=218 Identities=13% Similarity=0.101 Sum_probs=151.6
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|+++ +.+.+.++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+ ++.. ...... ..+|+++
T Consensus 131 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d~~~ 201 (393)
T 2huf_A 131 LSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMDR--WEIDAMY 201 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTTT--TTCSEEE
T ss_pred CCHHHHHHHHhccCCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchhh--cCccEEE
Confidence 35555 3333327889999999999997776 8899999999999999999985 3322 111222 2467777
Q ss_pred --eeccccCCccchheeEeChhhhhccCCCC---C-------------------CCC-CCCCHHHHHHHHHHHHHHHh--
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPGT---H-------------------GST-YGGNPLACKLAMTALDVILE-- 140 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~~---~-------------------~~~-~~~~~~~~~~a~a~l~~~~~-- 140 (242)
++|+++|+ .++|++++++++++.+.+.. . ..+ .+.+..+++++.++++.+..
T Consensus 202 ~s~sK~l~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 280 (393)
T 2huf_A 202 TGSQKVLGAP-PGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEG 280 (393)
T ss_dssp CCSSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHC
T ss_pred ECCCcccccC-CCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 56998755 55699999998887765420 0 111 13455666666667776643
Q ss_pred -ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEe-eeceeEEEEecCCchhHHHHHHHHHHC-CceeccC----CCCEEEEe
Q psy6548 141 -ENMIENAYKMGEIFRSELRSRLSPDIVPVVR-GKGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKPI----SNNIIRLS 213 (242)
Q Consensus 141 -~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~----~~~~lR~~ 213 (242)
++..++++++++++++.| +.++-....... ..+.++++.++.. .+..++.+.|.++ ||.+.++ ..+++|++
T Consensus 281 ~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~ 358 (393)
T 2huf_A 281 LPALIARHEDCAKRLYRGL-QDAGFELYADPKDRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIG 358 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHTTCCBSSCGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHH-HHcCCeeccCccccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCCEEEEE
Confidence 346788889999999999 665321111111 1245777887643 4678899999875 9999875 46799999
Q ss_pred c-cCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 214 P-ALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 214 ~-~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
+ ++..+++++++++++|+++++++..
T Consensus 359 ~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 359 LMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp CCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 8 4445799999999999999987654
No 140
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.85 E-value=3.3e-22 Score=169.03 Aligned_cols=210 Identities=12% Similarity=0.078 Sum_probs=140.7
Q ss_pred Chhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC--cccccccCCC-CC
Q psy6548 11 QVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG--KLLAIHYEDV-RP 83 (242)
Q Consensus 11 d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~-~~ 83 (242)
|+++ +.+.+ .++++++++.++|++|. +++.+++++|+++|++||+++|+||+|.+++..+ .......+.. ..
T Consensus 158 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
T 2q7w_A 158 DFDALINSLNEAQAGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHK 236 (396)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCC
Confidence 5666 44443 25788888999999995 6677899999999999999999999998876543 2112221111 12
Q ss_pred C---EEEeecccc-CCccchheeEe---Ch----hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHH------H--hccHH
Q psy6548 84 D---IVILGKALS-GGLYPISAVLA---DD----EVMGTLVPGTHGSTYGGNPLACKLAMTALDVI------L--EENMI 144 (242)
Q Consensus 84 ~---~~~~sK~~~-~g~~~~g~~~~---~~----~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~------~--~~~~~ 144 (242)
+ +.++||+++ +| +|+||+++ ++ ++++.+.........+.+++++.++.++++.. . -++..
T Consensus 237 ~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~ 315 (396)
T 2q7w_A 237 ELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMR 315 (396)
T ss_dssp CEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-
T ss_pred cEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHH
Confidence 2 234889999 89 99999986 55 34444432111222234788888877777543 1 13356
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 145 ENAYKMGEIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
++++++++.+.+.| +.++. .+....+..++++|+.++ .+.+.+.|.++||.+.++ +|++++.. ++++
T Consensus 316 ~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gv~v~~~----~Ris~~~~-~~e~ 384 (396)
T 2q7w_A 316 QRIQRMRQLFVNTL-QEKGANRDFSFIIKQNGMFSFSGLT-----KEQVLRLREEFGVYAVAS----GRVNVAGM-TPDN 384 (396)
T ss_dssp CHHHHHHHHHHHHH-HHTTCCSCCTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT----CEEEGGGC-CTTT
T ss_pred HHHHHHHHHHHHHH-HhcCCCCCcceecCCCceEEEecCC-----HHHHHHHHHhcCeeecCC----ceEEEeec-CHHH
Confidence 67788888888888 66542 122223345667666442 245666777899999874 69997754 8999
Q ss_pred HHHHHHHHHHH
Q psy6548 223 LREGLDIIINT 233 (242)
Q Consensus 223 i~~~~~~l~~~ 233 (242)
+++++++|+++
T Consensus 385 i~~~~~~l~~~ 395 (396)
T 2q7w_A 385 MAPLCEAIVAV 395 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 141
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.85 E-value=1.3e-20 Score=162.86 Aligned_cols=215 Identities=13% Similarity=0.161 Sum_probs=155.8
Q ss_pred Chhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 11 QVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 11 d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
|+++ +.+. .+++++|++++++|++|.+.+ +++|.++|++||+++|+|++|+ .+.. +.....+ ..|++
T Consensus 200 d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~-~g~~--~~~~~~~--~~D~~ 270 (465)
T 3e9k_A 200 RIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA-VGNV--ELYLHDW--GVDFA 270 (465)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHHHH--TCCEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEeCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhh-cCCc--CCchhhc--CCCEE
Confidence 4566 4443 258999999999999998876 8999999999999999999996 2211 1111222 35676
Q ss_pred E--eecccc-CCccchheeEeChhhhhccCCCCCCC---------------C----------CCCCHHHHHHHHHHHHHH
Q psy6548 87 I--LGKALS-GGLYPISAVLADDEVMGTLVPGTHGS---------------T----------YGGNPLACKLAMTALDVI 138 (242)
Q Consensus 87 ~--~sK~~~-~g~~~~g~~~~~~~~~~~l~~~~~~~---------------~----------~~~~~~~~~~a~a~l~~~ 138 (242)
+ ++|+++ |+ .++|+++.++++.+.+.+...++ . .+.+.+++++..++++.+
T Consensus 271 ~~s~~K~l~~gp-~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~ 349 (465)
T 3e9k_A 271 CWCSYKYLNAGA-GGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIF 349 (465)
T ss_dssp EECSSSTTCCCT-TCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred EECcccccccCC-CceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHH
Confidence 6 569996 44 56899999998887776543221 0 145567777777888877
Q ss_pred Hh---ccHHHHHHHHHHHHHHHHHhhc----------CC-CCCC--eEeeeceeEEEEecCCchhHHHHHHHHHHCCcee
Q psy6548 139 LE---ENMIENAYKMGEIFRSELRSRL----------SP-DIVP--VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVT 202 (242)
Q Consensus 139 ~~---~~~~~~~~~~~~~l~~~l~~~l----------~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 202 (242)
.. +++.++.+++++++.+.| +.+ .. .+.. .....|.++++.++. +..++.+.|.++||.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---~~~~l~~~L~~~Gi~v 425 (465)
T 3e9k_A 350 KQATMKALRKKSVLLTGYLEYLI-KHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---PNKDVFQELEKRGVVC 425 (465)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHH-HHHCC---------CEEECSCSSGGGBCSCEEEEECC---TTCCHHHHHHTTTEEC
T ss_pred HHcCHHHHHHHHHHHHHHHHHHH-HhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC---CHHHHHHHHHHCCEEE
Confidence 54 457788889999999999 543 11 1111 122247788888763 3567899999999999
Q ss_pred ccCCCCEEEEec-cCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 203 KPISNNIIRLSP-ALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 203 ~~~~~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
....++.+|+++ +.+++++|++++++.|++++++...
T Consensus 426 ~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~~ 463 (465)
T 3e9k_A 426 DKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAET 463 (465)
T ss_dssp EEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC---
T ss_pred ecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhccc
Confidence 877789999998 8999999999999999999876543
No 142
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.85 E-value=2e-20 Score=156.16 Aligned_cols=214 Identities=11% Similarity=0.012 Sum_probs=142.9
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC--ccCcccccccCCCCCCEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG--RTGKLLAIHYEDVRPDIV- 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~--~~g~~~~~~~~~~~~~~~- 86 (242)
|+++ +.. .+++++|++++++|++|+.+++.+++++|+++|++||+++|+||+|..+. ..+... ..+....|++
T Consensus 127 d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~~d~~~ 203 (359)
T 3pj0_A 127 TIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSA--EEICALFDSVY 203 (359)
T ss_dssp CHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCH--HHHHTTCSEEE
T ss_pred CHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCH--HHhhccCCEEE
Confidence 5565 444 67899999999988876678888999999999999999999999985321 111111 1111234555
Q ss_pred -EeeccccCCccchheeEeChhhhhccCCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC
Q psy6548 87 -ILGKALSGGLYPISAVLADDEVMGTLVPG--THGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS 163 (242)
Q Consensus 87 -~~sK~~~~g~~~~g~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 163 (242)
++||+++++ .+ |++++++++++.+... ..+.+.......++++.++++... +..++.+++++++++.| ++++
T Consensus 204 ~s~sK~~~~~-~g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~l~~~L-~~~~ 278 (359)
T 3pj0_A 204 VSFYKGIGGI-AG-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRI--GKMAEYFEAAKGLAERF-NSCS 278 (359)
T ss_dssp EESSSTTCCS-SC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHG--GGHHHHHHHHHHHHHHH-HTST
T ss_pred EeccccCCCc-ce-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHH-hhCC
Confidence 488999866 44 7788899888877642 122222223333334445555432 34556778888999999 6653
Q ss_pred CCCCC-eEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccC------CCCEEEEecc---CcCCHHHHHHHHHHHHH
Q psy6548 164 PDIVP-VVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPI------SNNIIRLSPA---LNITEQELREGLDIIIN 232 (242)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~------~~~~lR~~~~---~~~t~e~i~~~~~~l~~ 232 (242)
. +.. ..+..+.++++.++... .+...+.+.|.++||.+.++ +.+++|++.. ...+.+++++++++|.+
T Consensus 279 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 279 G-VKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp T-EEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred C-ceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 2 111 11345667788776542 34678999999999999886 2457899753 34689999999999876
Q ss_pred H
Q psy6548 233 T 233 (242)
Q Consensus 233 ~ 233 (242)
.
T Consensus 358 ~ 358 (359)
T 3pj0_A 358 E 358 (359)
T ss_dssp H
T ss_pred c
Confidence 5
No 143
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.84 E-value=1.3e-21 Score=165.29 Aligned_cols=210 Identities=14% Similarity=0.084 Sum_probs=141.3
Q ss_pred Chhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC--cccccccC-CCCC
Q psy6548 11 QVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG--KLLAIHYE-DVRP 83 (242)
Q Consensus 11 d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~-~~~~ 83 (242)
|+++ +.+.+ .+++++++++++|++|. +++.+++++|+++|++||+++|+||+|++++..+ .......+ ...+
T Consensus 155 d~~~l~~~l~~~~~~~~~~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 233 (394)
T 2ay1_A 155 DFEGMKADLAAAKKGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIP 233 (394)
T ss_dssp CHHHHHHHHHTCCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCC
Confidence 4555 33433 34788888999999995 5677899999999999999999999999876543 11111111 1123
Q ss_pred CEE---Eeecccc-CCccchheeEe---ChhhhhccCCC---CCCCCC-CCCHHHHHHHHHHHHHH--------HhccHH
Q psy6548 84 DIV---ILGKALS-GGLYPISAVLA---DDEVMGTLVPG---THGSTY-GGNPLACKLAMTALDVI--------LEENMI 144 (242)
Q Consensus 84 ~~~---~~sK~~~-~g~~~~g~~~~---~~~~~~~l~~~---~~~~~~-~~~~~~~~~a~a~l~~~--------~~~~~~ 144 (242)
+++ ++||+++ +| +|+||+++ ++++++.+... ....++ +.+++++.++.++++.. ..++..
T Consensus 234 ~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~ 312 (394)
T 2ay1_A 234 EVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR 312 (394)
T ss_dssp SEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 433 4889999 89 89999987 56543332210 011233 34778888777777643 123466
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 145 ENAYKMGEIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
++++++++++.+.| +.++. .+....+..|+++|+.++ .+.+.+.|.++||.+.++ +|++++ ..++++
T Consensus 313 ~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~l~~~gi~v~~~----~Ris~~-~~~~~~ 381 (394)
T 2ay1_A 313 SGMLRLREQLAGEL-RDLSGSDRFGFVAEHRGMFSRLGAT-----PEQVKRIKEEFGIYMVGD----SRINIA-GLNDNT 381 (394)
T ss_dssp HHHHHHHHHHHHHH-HHHHTSSTTTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT----CEEEGG-GCCTTT
T ss_pred HHHHHHHHHHHHHH-HhcCCCCCeeEEcCCceEEEeeCCC-----HHHHHHHHHhCCEEecCC----CeEEee-cCCHhh
Confidence 77788888888888 55531 122222344777776543 245677777899999875 699977 469999
Q ss_pred HHHHHHHHHHH
Q psy6548 223 LREGLDIIINT 233 (242)
Q Consensus 223 i~~~~~~l~~~ 233 (242)
+++++++|+++
T Consensus 382 i~~~~~~l~~~ 392 (394)
T 2ay1_A 382 IPILARAIIEV 392 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999999875
No 144
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.84 E-value=2.4e-20 Score=158.11 Aligned_cols=216 Identities=14% Similarity=0.117 Sum_probs=148.0
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|..+. .+... .+ .
T Consensus 131 ~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~-~~~~~---~~--~ 200 (398)
T 2rfv_A 131 VRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSPY-CQQPL---QL--G 200 (398)
T ss_dssp EEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCTT-TCCGG---GG--T
T ss_pred EEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hh--C
Confidence 45678888888 4444568999999999999997775 9999999999999999999997431 12211 12 3
Q ss_pred CCEEE--eecccc-CCccch-heeEeChhhhh-ccCCCCCCC-CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 83 PDIVI--LGKALS-GGLYPI-SAVLADDEVMG-TLVPGTHGS-TYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 83 ~~~~~--~sK~~~-~g~~~~-g~~~~~~~~~~-~l~~~~~~~-~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
.|+++ ++|+++ +| .|+ |++++++++++ .+.+..... +.+.+++.+.++.++++.+. ...+...++...+++
T Consensus 201 ~di~~~s~sK~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~ 277 (398)
T 2rfv_A 201 ADIVVHSVTKYINGHG-DVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLG--IRMERHCENALKIAR 277 (398)
T ss_dssp CSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHH
T ss_pred CcEEEEeCcccccCCC-CceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHH
Confidence 46544 789998 56 787 99999988776 555433333 45678888888777776432 234556667777777
Q ss_pred HHHhhcC-------CCCCC-------e--EeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC---------------
Q psy6548 157 ELRSRLS-------PDIVP-------V--VRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------------- 205 (242)
Q Consensus 157 ~l~~~l~-------~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------------- 205 (242)
.| +..+ ..... . ..+.+.+++++++....+...+.+.+...|+.++++
T Consensus 278 ~l-~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~ 356 (398)
T 2rfv_A 278 FL-EGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHS 356 (398)
T ss_dssp HH-HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSS
T ss_pred HH-HcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccc
Confidence 77 4432 00000 0 013577888888752124555555555556665543
Q ss_pred ----------C--CCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 ----------S--NNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 ----------~--~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+ .+.+|++++...++++++++.+.|+++
T Consensus 357 ~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 357 PVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 579999999999999999988888653
No 145
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.84 E-value=4.6e-20 Score=153.73 Aligned_cols=206 Identities=8% Similarity=0.029 Sum_probs=149.1
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh-CCEEEEeccccccCccCcccccccCCCCCCEEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY-NVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~- 87 (242)
|+++ + .++++++|++++++|++|.+.+ +++|.++|++| |+++|+|++|+.. .. ..... . .|+++
T Consensus 121 d~~~l~--~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~~~-~~--~~~~~--~--~d~~~~ 187 (362)
T 3ffr_A 121 YPADIT--VPADAEIICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSSLP-YP--KFDWT--K--IDSVFF 187 (362)
T ss_dssp CGGGCC--CCTTCCEEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTTTT-SS--CCCTT--S--CSEEEE
T ss_pred CHHHHh--ccCCccEEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccccC-Cc--ccChh--H--CcEEEE
Confidence 4454 5 5678999999999999997776 99999999999 9999999998622 11 11111 1 56666
Q ss_pred -eeccccCCccchheeEeChhhhhccCCCCC--------------------CC-CCCCCHHHHHHHHHHHHHHHh---cc
Q psy6548 88 -LGKALSGGLYPISAVLADDEVMGTLVPGTH--------------------GS-TYGGNPLACKLAMTALDVILE---EN 142 (242)
Q Consensus 88 -~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~--------------------~~-~~~~~~~~~~~a~a~l~~~~~---~~ 142 (242)
++|+++++ .++|+++.++++++.+.+... +. .++.+..++.++.++++.+.. ++
T Consensus 188 s~~K~~~~~-~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 266 (362)
T 3ffr_A 188 SVQKCFGLP-AGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADG 266 (362)
T ss_dssp ETTSTTCCC-SCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ecccccCCC-CceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHH
Confidence 55999955 567888888888766653211 11 344566677777777776544 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC-CCCC--eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----CCCEEEEecc
Q psy6548 143 MIENAYKMGEIFRSELRSRLSP-DIVP--VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPA 215 (242)
Q Consensus 143 ~~~~~~~~~~~l~~~l~~~l~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lR~~~~ 215 (242)
+.++.+++++++++.| +.++. .... .....+.++++.++. +..++.+.|.++||.+.++ +++++|++++
T Consensus 267 ~~~~~~~~~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~ 342 (362)
T 3ffr_A 267 IRKQTEEKAALINTYI-ESSKVFSFGVEDAKLRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYGSKKETQIRIANF 342 (362)
T ss_dssp HHHHHHHHHHHHHHHH-HHCSSEEESSSCGGGBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHH-HHccCceeccCChhhcCCceEEEecCC---CHHHHHHHHHHCCeEEecCccccCCCEEEEECC
Confidence 6778888899999999 66632 1111 112235677777765 5788999999999999864 5689999999
Q ss_pred CcCCHHHHHHHHHHHHHHH
Q psy6548 216 LNITEQELREGLDIIINTI 234 (242)
Q Consensus 216 ~~~t~e~i~~~~~~l~~~l 234 (242)
...++++++++++.|++++
T Consensus 343 ~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 343 PAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 8899999999999998764
No 146
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.84 E-value=8e-20 Score=160.75 Aligned_cols=224 Identities=14% Similarity=0.085 Sum_probs=138.3
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHH--HhhCCEEEEeccccccCccCcccccccC-CCCCCEE
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALC--SQYNVLFIADEVQTGLGRTGKLLAIHYE-DVRPDIV 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~--~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~ 86 (242)
|+++ +...+.++++|++++++|++|. +.+.+.+++|+++| ++||++||+||+|.+|........ ... +....+.
T Consensus 234 d~~~l~~~~~~~~k~v~l~~p~NPtG~-~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~-~~~~~~~i~~~ 311 (546)
T 2zy4_A 234 PDSELDKLKDPAIKIFFCVNPSNPPSV-KMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLF-AICPENTLLVY 311 (546)
T ss_dssp CHHHHGGGGSTTEEEEEEESSCSSSCB-CCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHH-HHCGGGEEEEE
T ss_pred CHHHHHHhhCCCCeEEEEECCCCCCCc-cCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHH-HhCCCCEEEEE
Confidence 4555 4444678999999999999995 55667899999999 889999999999988753222111 111 1111233
Q ss_pred Eeecccc-CCccchheeEeChh-hhhccCCC------------------------------------CCCCCCCCCHHHH
Q psy6548 87 ILGKALS-GGLYPISAVLADDE-VMGTLVPG------------------------------------THGSTYGGNPLAC 128 (242)
Q Consensus 87 ~~sK~~~-~g~~~~g~~~~~~~-~~~~l~~~------------------------------------~~~~~~~~~~~~~ 128 (242)
+|||.+| +| +|+||++++++ +++.+... ....+.+.+.+.+
T Consensus 312 S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 390 (546)
T 2zy4_A 312 SFSKYFGATG-WRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQ 390 (546)
T ss_dssp ESTTTTTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHH
T ss_pred eCccccCCCC-cceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHH
Confidence 4899998 89 99999998765 65554210 0112234555655
Q ss_pred HHHH--HHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecC------Cc----------hhHH
Q psy6548 129 KLAM--TALDVILE-ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDK------SI----------LEVY 189 (242)
Q Consensus 129 ~~a~--a~l~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~----------~~~~ 189 (242)
.++. +...++.+ +.+.+.+++..+.-++.+.+.++..+....+..++++|++++. .+ .+.+
T Consensus 391 ~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~ 470 (546)
T 2zy4_A 391 VQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD 470 (546)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGTSSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence 5421 11122322 2333333333332233332333322222234567888988753 00 1234
Q ss_pred HHHHHHHHCCceeccC-----CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 190 DVCIKMKDAGLVTKPI-----SNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 190 ~~~~~l~~~gi~~~~~-----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.+.+.+.++||.+.|+ +++++|+++. ..+++++++++++|++++.+..
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 4677788899999986 3578999965 3489999999999999988764
No 147
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.84 E-value=1.9e-20 Score=163.16 Aligned_cols=213 Identities=12% Similarity=0.062 Sum_probs=144.3
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc--cccccc----CC----CCCCEE---E
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK--LLAIHY----ED----VRPDIV---I 87 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~----~~----~~~~~~---~ 87 (242)
++++|++++++|++|. +.+.+.+++|+++|++||+++|+||+|.++...+. ...+.. .+ -...++ +
T Consensus 235 ~~k~i~l~np~NPTG~-v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S 313 (498)
T 3ihj_A 235 DPKVLCIINPGNPTGQ-VQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHS 313 (498)
T ss_dssp EEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCCCCC-cCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEec
Confidence 6889888899999995 55677899999999999999999999987543321 111111 01 111222 4
Q ss_pred eeccc-c-CCccchheeE---eChhhhhccCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHh-ccHHHHHHHH
Q psy6548 88 LGKAL-S-GGLYPISAVL---ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALD-----------VILE-ENMIENAYKM 150 (242)
Q Consensus 88 ~sK~~-~-~g~~~~g~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~-----------~~~~-~~~~~~~~~~ 150 (242)
+||++ | +| +|+||++ .++++++.+.... ....+.+.+++.++.++++ .++. +.+.+.++++
T Consensus 314 ~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~ 391 (498)
T 3ihj_A 314 TSKGYMGECG-YRGGYMEVINLHPEIKGQLVKLL-SVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKK 391 (498)
T ss_dssp SSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHHH-HHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcc-cceEEEEEecCCHHHHHHHHHHH-hccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHH
Confidence 89999 5 79 9999998 5788888776532 2334556777766555542 1221 3456778888
Q ss_pred HHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCc----------hhHHH--HHHHHHHCCceeccC-------CCCEEE
Q psy6548 151 GEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSI----------LEVYD--VCIKMKDAGLVTKPI-------SNNIIR 211 (242)
Q Consensus 151 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--~~~~l~~~gi~~~~~-------~~~~lR 211 (242)
++.+.+.| +.++. +....+..+++.|+.+..+. .+.++ ..+.|.++||.+.|+ +.+++|
T Consensus 392 ~~~l~~~L-~~~~g-~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~R 469 (498)
T 3ihj_A 392 AKLTEDLF-NQVPG-IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFR 469 (498)
T ss_dssp HHHHHHHH-HTSTT-EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEE
T ss_pred HHHHHHHH-hcCCC-cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEE
Confidence 89999999 66632 22223345677776654321 12333 345556789999874 345899
Q ss_pred EeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 212 LSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 212 ~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
+++ ..+++++++++++|++.+++..++
T Consensus 470 is~--~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 470 MTI--LPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp EEC--CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 995 579999999999999999887653
No 148
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=2.3e-19 Score=148.20 Aligned_cols=212 Identities=13% Similarity=0.057 Sum_probs=146.0
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHh-hCCEEEEeccccccCccCcccccccCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-YNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~-~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
+..+|+.|+++ +...++++++|++++++|++|.+.+ +++|.++|++ ||+++|+||+|+.. ....+ . .+
T Consensus 65 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~~-~~~~~--~-~~-- 134 (331)
T 1pff_A 65 VDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASP-ILTNP--L-DL-- 134 (331)
T ss_dssp EEEECTTSTTHHHHTCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHH-HHCCG--G-GG--
T ss_pred EEEeCCCCHHHHHHhhcCCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCccc-ccCCh--h-hc--
Confidence 44567778888 5555578999999999999998775 9999999999 99999999999632 11111 1 12
Q ss_pred CCCEEE--eecccc-CCccc-hheeEeCh-hhhhccCCCCCC-CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALS-GGLYP-ISAVLADD-EVMGTLVPGTHG-STYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 82 ~~~~~~--~sK~~~-~g~~~-~g~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
..|+++ ++|+++ +| .| +|++++++ ++++.+.+.... .+.+.+++.+.++.++++.+.. ..+...++...+.
T Consensus 135 ~~d~~~~s~~K~~~~~~-~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~ 211 (331)
T 1pff_A 135 GVDIVVHSATKYINGHT-DVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDM--RVKRAAENAQKVA 211 (331)
T ss_dssp TCSEEEEETTTTTSSSS-SCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCcEEEEECccccCCCC-CceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHHH
Confidence 346555 789999 45 67 78999998 888888776555 5556777777666666664422 2233444555555
Q ss_pred HHHHhhcC-------CCCCC---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC--------------
Q psy6548 156 SELRSRLS-------PDIVP---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-------------- 205 (242)
Q Consensus 156 ~~l~~~l~-------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-------------- 205 (242)
+.+ +... ..... ..++.+.++.+.+.. .+++.+.|.++||.+...
T Consensus 212 ~~l-~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~ 286 (331)
T 1pff_A 212 EFL-HEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG----LEKAKKVLDNCHVVSLAVSLGGPESLIQHPAS 286 (331)
T ss_dssp HHH-HHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS----HHHHHHHHHTCSSSEECSSCCSSSCEEECHHH
T ss_pred HHH-HcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC----HHHHHHHHHhCCCceeccCCCCcceeeecchh
Confidence 555 3221 00000 012346678887752 467788888999966322
Q ss_pred ----------------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 ----------------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 ----------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
..+.+|++++..+++++++++++.|+++
T Consensus 287 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 287 MTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred hcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1579999999999999999999988753
No 149
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.83 E-value=1.4e-20 Score=160.65 Aligned_cols=211 Identities=12% Similarity=0.101 Sum_probs=140.1
Q ss_pred Chhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc--ccccccC-CCCC
Q psy6548 11 QVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK--LLAIHYE-DVRP 83 (242)
Q Consensus 11 d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~-~~~~ 83 (242)
|++. +.+. +++++++++++++|++|. .++.+.+++|+++|++||+++|+||+|.++...+. ......+ +...
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGV-DLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANL 259 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCC
Confidence 5665 3444 267899999999999995 55778899999999999999999999988765431 1111111 1222
Q ss_pred CE---EEeecccc-CCccchheeEe---Chhhhhcc----CCCCCCCCCCCCHHHHHHHHHHHHHH------H--hccHH
Q psy6548 84 DI---VILGKALS-GGLYPISAVLA---DDEVMGTL----VPGTHGSTYGGNPLACKLAMTALDVI------L--EENMI 144 (242)
Q Consensus 84 ~~---~~~sK~~~-~g~~~~g~~~~---~~~~~~~l----~~~~~~~~~~~~~~~~~~a~a~l~~~------~--~~~~~ 144 (242)
++ .++||.++ +| +|+||+++ ++++++.+ .......+.+.+++++.++.++++.. . -+++.
T Consensus 260 ~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 338 (420)
T 4f4e_A 260 NVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR 338 (420)
T ss_dssp CEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 32 33889999 79 99999863 45544432 21111223344566666655555431 1 13466
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 145 ENAYKMGEIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
++++++++.+.+.| +.+.. .+....+..|++.|+.++ .+.+.+.+.++||.+.+.+ |+++.. .++++
T Consensus 339 ~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~l~~~gI~v~~~~----Ris~~~-~~~~~ 407 (420)
T 4f4e_A 339 DRIRAMRNGLVERL-KAAGIERDFSFINAQRGMFSYSGLT-----SAQVDRLREEFGIYAVSTG----RICVAA-LNTRN 407 (420)
T ss_dssp HHHHHHHHHHHHHH-HHTTCSSCCTHHHHSCSSEEECCCC-----HHHHHHHHHHHCEECCTTS----EEEGGG-CCTTT
T ss_pred HHHHHHHHHHHHHH-HhcCCCCCceeECCCccEEEEeCCC-----HHHHHHHHHhCCEEecCCC----eEEEec-CCHHH
Confidence 78888889999999 55531 233333456677776543 3456777778999999863 898653 37788
Q ss_pred HHHHHHHHHHHH
Q psy6548 223 LREGLDIIINTI 234 (242)
Q Consensus 223 i~~~~~~l~~~l 234 (242)
+++++++|++++
T Consensus 408 i~~~~~~l~~~l 419 (420)
T 4f4e_A 408 LDVVANAIAAVL 419 (420)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 150
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.83 E-value=1.8e-20 Score=158.43 Aligned_cols=210 Identities=13% Similarity=0.106 Sum_probs=138.1
Q ss_pred Chhh--hcCCC--CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC--cccccccC-CCCC
Q psy6548 11 QVPA--KLKSN--PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG--KLLAIHYE-DVRP 83 (242)
Q Consensus 11 d~~~--~~~~~--~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~-~~~~ 83 (242)
|+++ +.+.+ ++++++++++++|++|. ..+.+.+++|+++|++||+++|+||+|.++...+ .......+ +...
T Consensus 159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 3fsl_A 159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGA-DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL 237 (397)
T ss_dssp CHHHHHHHHTTCCTTCEEEECSSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred cHHHHHHHHHhCCCCCEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence 5666 44442 67899999999999995 5567789999999999999999999998875442 11111111 1222
Q ss_pred C---EEEeecccc-CCccchheeEe---ChhhhhccCCC----CCCCCCCCCHHHHHHHHHHHHHH------H--hccHH
Q psy6548 84 D---IVILGKALS-GGLYPISAVLA---DDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVI------L--EENMI 144 (242)
Q Consensus 84 ~---~~~~sK~~~-~g~~~~g~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~~a~a~l~~~------~--~~~~~ 144 (242)
+ +.++||.++ +| +|+||+++ +++.++.+... ....+...+.+++.++.++++.. . .++..
T Consensus 238 ~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 316 (397)
T 3fsl_A 238 PALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMR 316 (397)
T ss_dssp CEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred CEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 2 334889999 89 99999874 44555433211 01222334556666555444421 1 13467
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHH
Q psy6548 145 ENAYKMGEIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQE 222 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~ 222 (242)
++++++++.+++.| +++.. ++....+..+++.|+.++ .+.+.+.|.++||.+.+++ |+++.. .++++
T Consensus 317 ~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gi~v~~g~----Ris~~~-~~~~~ 385 (397)
T 3fsl_A 317 TRILAMRQELVKVL-STEMPERNFDYLLNQRGMFSYTGLS-----AAQVDRLREEFGVYLIASG----RMCVAG-LNTAN 385 (397)
T ss_dssp HHHHHHHHHHHHHH-HHHCTTSCCTHHHHCCSSEEECCCC-----HHHHHHHHHTTCEECCTTC----EEEGGG-CCTTT
T ss_pred HHHHHHHHHHHHHH-HhcCCCCCceeecCCceEEEecCCC-----HHHHHHHHHhCCEEECCCC----eEEEEe-cCHhh
Confidence 78888899999999 55532 222223345677776543 3456777788999999875 888643 37788
Q ss_pred HHHHHHHHHHH
Q psy6548 223 LREGLDIIINT 233 (242)
Q Consensus 223 i~~~~~~l~~~ 233 (242)
+++++++|+++
T Consensus 386 i~~~~~~l~~~ 396 (397)
T 3fsl_A 386 VQRVAKAFAAV 396 (397)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 151
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.83 E-value=3.7e-20 Score=156.80 Aligned_cols=215 Identities=13% Similarity=0.087 Sum_probs=146.1
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVI 87 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~ 87 (242)
|+++ +.+.++++++|++++.++ |... .+++|+++|++||+++|+||+|+ ++..+.... ..++ .+|+++
T Consensus 151 d~~~l~~~i~~~~~~~v~~~~~~~--~~~~----~l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~~--~~~~~~~di~~ 221 (405)
T 2vi8_A 151 DYDDVREKARLHRPKLIVAAAAAY--PRII----DFAKFREIADEVGAYLMVDMAHI-AGLVAAGLH--PNPVPYAHFVT 221 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECCSSC--CSCC----CHHHHHHHHHHHTCEEEEECTTT-HHHHHTTSS--CCSTTTCSEEE
T ss_pred CHHHHHHHHHhcCCeEEEEeCCCC--CccC----CHHHHHHHHHHcCCEEEEEcccc-ccccccCcC--CCccccCCEEE
Confidence 5555 333333678888855332 3222 28999999999999999999997 322221111 1111 467664
Q ss_pred --eeccccCCccchheeEeChhhhhccCCCCCCCCCCC-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhh
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGG-NPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELRSR 161 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 161 (242)
++|+++|+ .+ |++++++++++.+.+....+.+++ ++..++++.++++.+.. +++.++++++++++++.| +.
T Consensus 222 ~s~sK~~~g~-~g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L-~~ 298 (405)
T 2vi8_A 222 TTTHKTLRGP-RG-GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL-QN 298 (405)
T ss_dssp EESSSTTCCC-SC-EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred EeccccCCCC-CC-eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-Hh
Confidence 88999966 55 999999888877654322333333 55566665677776543 457788889999999999 66
Q ss_pred cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEeccC----cCCHHHHHHHH
Q psy6548 162 LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPAL----NITEQELREGL 227 (242)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~~----~~t~e~i~~~~ 227 (242)
++-.. ..+.+.++++++.++..+.+..++.+.|.++||.+.++ .++.+|++++. .++++++++++
T Consensus 299 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~ 377 (405)
T 2vi8_A 299 EGFTL-VSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIA 377 (405)
T ss_dssp TTCEE-GGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHH
T ss_pred CCCeE-ecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHH
Confidence 53111 11123578889988752235778999999999999863 24689999876 56899999999
Q ss_pred HHHHHHHHHHh
Q psy6548 228 DIIINTINTMA 238 (242)
Q Consensus 228 ~~l~~~l~~~~ 238 (242)
++|+++++++.
T Consensus 378 ~~l~~~~~~~~ 388 (405)
T 2vi8_A 378 AIIGLVLKNVG 388 (405)
T ss_dssp HHHHHHHTCTT
T ss_pred HHHHHHHhccc
Confidence 99999887653
No 152
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=6e-20 Score=155.60 Aligned_cols=214 Identities=14% Similarity=0.063 Sum_probs=146.8
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-cCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+.++++++|+++.+++ |...+ +++|+++|++||+++|+||+|++ +...+.... ..+ .+|++
T Consensus 150 ~d~~~l~~~l~~~~~~~v~~~~p~~--~~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~ 220 (407)
T 2dkj_A 150 IDLEEVRRLALEHRPKVIVAGASAY--PRFWD----FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVV 220 (407)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEE
T ss_pred cCHHHHHHHHhhcCCeEEEEecccc--CCCCC----HHHHHHHHHHcCCEEEEEccccccccccCccCC--ccc-cccEE
Confidence 35555 334334678888843333 22332 89999999999999999999975 433332111 111 25776
Q ss_pred --EeeccccCCccchheeEeC-hhhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Q psy6548 87 --ILGKALSGGLYPISAVLAD-DEVMGTLVPGT-HGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 87 --~~sK~~~~g~~~~g~~~~~-~~~~~~l~~~~-~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~ 159 (242)
+++|+++| .++|+++++ +++++.+.+.. .+.+.+.++..++++.++++.... +++.++++++++++++.|
T Consensus 221 ~~s~sK~l~g--~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L- 297 (407)
T 2dkj_A 221 TSTTHKTLRG--PRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEEL- 297 (407)
T ss_dssp EEESSGGGCC--CSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EEeccccCCC--CCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-
Confidence 48898875 467999999 78887765432 223334456556566677776533 457788889999999999
Q ss_pred hhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEeccCc----CCHHHHHH
Q psy6548 160 SRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPALN----ITEQELRE 225 (242)
Q Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~~~----~t~e~i~~ 225 (242)
+.++-... ..+..++++++.++..+.+..++.+.|.++||.+.++ .++.+|++++.. .+++++++
T Consensus 298 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~ 376 (407)
T 2dkj_A 298 ARRGYRIV-TGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPL 376 (407)
T ss_dssp HHTTCEEG-GGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHH
T ss_pred HhCCceee-cCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHH
Confidence 66532111 1134678889988752235778999999999999864 256899997653 79999999
Q ss_pred HHHHHHHHHHH
Q psy6548 226 GLDIIINTINT 236 (242)
Q Consensus 226 ~~~~l~~~l~~ 236 (242)
++++|++++++
T Consensus 377 ~~~~l~~~~~~ 387 (407)
T 2dkj_A 377 VAELIDRALLE 387 (407)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999877
No 153
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.83 E-value=4.6e-20 Score=155.71 Aligned_cols=214 Identities=17% Similarity=0.147 Sum_probs=146.6
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+++... ... ...
T Consensus 119 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~-~~~-----~~~ 188 (386)
T 1cs1_A 119 VLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVD----IAKICHLAREVGAVSVVDNTFLSPALQ-NPL-----ALG 188 (386)
T ss_dssp EEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCTTTC-CGG-----GGT
T ss_pred EEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccccC-Ccc-----ccC
Confidence 45677888888 4433457899999999999998775 999999999999999999999865322 111 123
Q ss_pred CCEE--EeeccccCCccch-heeEeCh-hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q psy6548 83 PDIV--ILGKALSGGLYPI-SAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 83 ~~~~--~~sK~~~~g~~~~-g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l 158 (242)
+|++ +++|+++++..++ |++++++ ++++.+.+....++.+.+++++.++.++++.+. ...+...++...+.+.|
T Consensus 189 ~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l 266 (386)
T 1cs1_A 189 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYL 266 (386)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHH
Confidence 5655 4889998431565 8998875 787777654344445567777776666655432 23455667777777777
Q ss_pred HhhcCC------CCCC----------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc---C--------------
Q psy6548 159 RSRLSP------DIVP----------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP---I-------------- 205 (242)
Q Consensus 159 ~~~l~~------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~-------------- 205 (242)
+.++. .... ...+.+.++.+.+... .+.+.+.|.++||.++. +
T Consensus 267 -~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~ 342 (386)
T 1cs1_A 267 -QTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD---EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTH 342 (386)
T ss_dssp -TTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC---HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTT
T ss_pred -hcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC---HHHHHHHHHhCCcceEcccCCCcceeeeccccccc
Confidence 55431 0000 0123477888887653 56778888889998863 1
Q ss_pred -------------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 -------------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 -------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
..+.+|++++...++++++.+.+.|+++
T Consensus 343 ~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 343 AGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp TTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1479999998877777777777666553
No 154
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.83 E-value=2.3e-19 Score=151.67 Aligned_cols=209 Identities=11% Similarity=0.037 Sum_probs=127.0
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEe-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVIL- 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~- 88 (242)
|+++ +...++++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++... .... .. +|++++
T Consensus 148 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~--~~~~--~~-~d~~~~s 217 (400)
T 3vax_A 148 SVEGVMERLRPDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKVP--GDLT--TP-IDMISIS 217 (400)
T ss_dssp CHHHHHTTCCTTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTSG--GGGG--SC-CSEEEEE
T ss_pred CHHHHHHhcCCCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCCC--cChh--hc-CcEEEEe
Confidence 6777 5555668999999999999997776 8999999999999999999996 22111 1112 23 677774
Q ss_pred -eccccCCccchheeE-eChh-hh---hccCCCCC-------CCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Q psy6548 89 -GKALSGGLYPISAVL-ADDE-VM---GTLVPGTH-------GSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEI 153 (242)
Q Consensus 89 -sK~~~~g~~~~g~~~-~~~~-~~---~~l~~~~~-------~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~ 153 (242)
+|.++ + .++|+++ ++++ +. ..+.+... ....+.++.++.++.++++.+.. +++.++.++++++
T Consensus 218 ~~K~~g-~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 295 (400)
T 3vax_A 218 GHKIGA-P-KGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSR 295 (400)
T ss_dssp TGGGTS-C-SSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred HHHhCC-C-CceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 49554 3 4578877 7652 21 22333221 11234566777776777776654 4577888888889
Q ss_pred HHHHHHhhcCCCCCCeEe--eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------------CC
Q psy6548 154 FRSELRSRLSPDIVPVVR--GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-----------------------NN 208 (242)
Q Consensus 154 l~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~ 208 (242)
+++.| + .......... ..+.++++.++. .+.+++.+.|. +||.++++. .+
T Consensus 296 l~~~L-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (400)
T 3vax_A 296 LLAGL-A-STSFQVNGDQDHVVPHILNLSFED--VDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASK 370 (400)
T ss_dssp HHHHH-T-TTTCEECSCTTSBCTTEEEEECTT--CCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTS
T ss_pred HHHhh-C-CCCEEEeCCcccCCCCEEEEEeCC--CCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCc
Confidence 98888 5 3321111111 124567777765 46788999999 999987742 48
Q ss_pred EEEEec-cCcCCHHHHHHHHHHHHHHHHH
Q psy6548 209 IIRLSP-ALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 209 ~lR~~~-~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
++|+++ +...+++++++++++|++++++
T Consensus 371 ~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 371 SLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEEEEEC--------------------
T ss_pred eEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 999999 8888999999999999988754
No 155
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.83 E-value=5.9e-21 Score=162.38 Aligned_cols=203 Identities=13% Similarity=0.056 Sum_probs=138.6
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccC---ccccc-ccCCCCC---C-E--EEeec
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTG---KLLAI-HYEDVRP---D-I--VILGK 90 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~-~~~~~~~---~-~--~~~sK 90 (242)
.++++++..++|++|. +.+.+.+++|+++|++||+++|+||+|.+|+..+ ..... ......+ + + .++||
T Consensus 176 ~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (412)
T 1yaa_A 176 GSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAK 254 (412)
T ss_dssp TCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTT
T ss_pred CCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCC
Confidence 3566666889999994 6667889999999999999999999998875443 11111 1111122 2 2 23889
Q ss_pred cccC-CccchheeE--e-----Chh----hhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHH
Q psy6548 91 ALSG-GLYPISAVL--A-----DDE----VMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--------EENMIENAYKM 150 (242)
Q Consensus 91 ~~~~-g~~~~g~~~--~-----~~~----~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--------~~~~~~~~~~~ 150 (242)
.++. | +|+||++ + +++ +++.+.........+.+++++.++.++++... .++..++++++
T Consensus 255 ~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (412)
T 1yaa_A 255 NAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKM 333 (412)
T ss_dssp TSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9995 9 9999998 7 555 66666542223333457888888777776542 23466778888
Q ss_pred HHHHHHHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHH
Q psy6548 151 GEIFRSELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 151 ~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
++++++.| +.++. .+....+..+++.|+.+ +...+.+.+.++||.+.+ .+|++++. .++++++++++
T Consensus 334 ~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~----~~Ris~~~-~~~~~i~~~~~ 402 (412)
T 1yaa_A 334 RHALRDHL-VKLGTPGNWDHIVNQCGMFSFTGL-----TPQMVKRLEETHAVYLVA----SGRASIAG-LNQGNVEYVAK 402 (412)
T ss_dssp HHHHHHHH-HHHTCSSCCTHHHHCCSSEEECCC-----CHHHHHHHHHHHCEECCT----TSEEEGGG-CCTTTHHHHHH
T ss_pred HHHHHHHH-HhhCCCCCeeeeccCceEEEeeCC-----CHHHHHHHHHhCCEEecc----CcEEEEcc-CCHhHHHHHHH
Confidence 88999999 66542 12222234456666533 234555555578999987 47999764 48999999999
Q ss_pred HHHHHHHH
Q psy6548 229 IIINTINT 236 (242)
Q Consensus 229 ~l~~~l~~ 236 (242)
+|+++++.
T Consensus 403 ~l~~~~~~ 410 (412)
T 1yaa_A 403 AIDEVVRF 410 (412)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998865
No 156
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.82 E-value=9.9e-21 Score=160.90 Aligned_cols=210 Identities=12% Similarity=0.087 Sum_probs=139.3
Q ss_pred Chhh--hcCC--CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc---cccccc-CCCC
Q psy6548 11 QVPA--KLKS--NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK---LLAIHY-EDVR 82 (242)
Q Consensus 11 d~~~--~~~~--~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~-~~~~ 82 (242)
|+++ +.+. ++.+++++++.++|++| .+++.+.+++|+++|++||+++|+||+|.+++..+. ...... .+..
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTG-VDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV 247 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence 4555 3343 34677788788899999 455678899999999999999999999988765441 111111 1333
Q ss_pred CCEE---Eeecccc-CCccchhee---EeChh----hhhccCCCCCCCCCCCCHHHHHHHHHHHHHH------H--hccH
Q psy6548 83 PDIV---ILGKALS-GGLYPISAV---LADDE----VMGTLVPGTHGSTYGGNPLACKLAMTALDVI------L--EENM 143 (242)
Q Consensus 83 ~~~~---~~sK~~~-~g~~~~g~~---~~~~~----~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~------~--~~~~ 143 (242)
++++ ++||.++ +| +|+||+ .++++ +++.+.......+++.+++++.++.++++.. . .++.
T Consensus 248 ~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 326 (409)
T 4eu1_A 248 PNLIVAQSFSKNFGLYG-HRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQM 326 (409)
T ss_dssp SCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccccCcc-CCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4443 4899999 89 999995 56666 5555543222344456678887777777632 1 2346
Q ss_pred HHHHHHHHHHHHHHHHhhcCC-C-CCCeEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccCCCCEEEEeccCcCCH
Q psy6548 144 IENAYKMGEIFRSELRSRLSP-D-IVPVVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPISNNIIRLSPALNITE 220 (242)
Q Consensus 144 ~~~~~~~~~~l~~~l~~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~lR~~~~~~~t~ 220 (242)
.++++++++++++.| +.++. . +....+..+++.|+.++ .++...++ ++||.+.|++ |+++.. .++
T Consensus 327 ~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gv~v~p~~----Ri~~~~-~~~ 394 (409)
T 4eu1_A 327 SSRIAEVRKRLVSEL-KACGSVHDWSHIERQVGMMAYTGLT------REQVELLRSEYHIYMTLNG----RAAVSG-LNS 394 (409)
T ss_dssp HHHHHHHHHHHHHHH-HHTTCCSCCHHHHHSCSSEEECCCC------HHHHHHHHHHHCEECCTTC----EEEGGG-CCT
T ss_pred HHHHHHHHHHHHHHH-HhcCCCCCcceecCCceEEEEeCCC------HHHHHHHHHcCCEEEcCCC----EEEEEe-cCH
Confidence 678888889999999 66541 1 22222345566664332 23455555 6799999863 777654 467
Q ss_pred HHHHHHHHHHHHHH
Q psy6548 221 QELREGLDIIINTI 234 (242)
Q Consensus 221 e~i~~~~~~l~~~l 234 (242)
+++++++++|++++
T Consensus 395 ~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 395 TNVEYVSQAIHNVT 408 (409)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHh
Confidence 78999999998765
No 157
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.82 E-value=2.3e-19 Score=150.82 Aligned_cols=211 Identities=19% Similarity=0.174 Sum_probs=145.7
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh--CCEEEEeccccccCccCcccccccCCCCCCEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY--NVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~--~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
|+++ +.+.++++++|++++++|++|.+.+ +++|+++|++| |+++|+||+|+ ++.. ...... ..+|++
T Consensus 125 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d~~ 195 (385)
T 2bkw_A 125 PLELITEKLSQNSYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCE--EFEFDE--WGVDFA 195 (385)
T ss_dssp CHHHHHHHHHHSCCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTS--CCCTTT--TTCSEE
T ss_pred CHHHHHHHHhcCCCCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCc--cccccc--cCceEE
Confidence 5555 3333447889999999999998776 88999999999 99999999996 2221 112222 245766
Q ss_pred E--eeccccCCccchheeEeChhhhh-ccCC----------------------CCC--CC-CCCCCHHHHHHHHHHHHHH
Q psy6548 87 I--LGKALSGGLYPISAVLADDEVMG-TLVP----------------------GTH--GS-TYGGNPLACKLAMTALDVI 138 (242)
Q Consensus 87 ~--~sK~~~~g~~~~g~~~~~~~~~~-~l~~----------------------~~~--~~-~~~~~~~~~~~a~a~l~~~ 138 (242)
+ ++|+++|+ .++|+++++++.++ .+.+ ... +. .++.+..++.++.++++.+
T Consensus 196 ~~s~~K~~~~~-~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 274 (385)
T 2bkw_A 196 LTASQKAIGAP-AGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEI 274 (385)
T ss_dssp EEESSSTTCCC-SCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred EecCccccccC-CcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 6 56999865 56799999988766 5421 000 01 1346677777777788776
Q ss_pred Hh---ccHHHHHHHHHHHHHHHH-HhhcCCCCCC-eE-e-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----
Q psy6548 139 LE---ENMIENAYKMGEIFRSEL-RSRLSPDIVP-VV-R-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS----- 206 (242)
Q Consensus 139 ~~---~~~~~~~~~~~~~l~~~l-~~~l~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----- 206 (242)
.. +++.++.+++++++++.| ++ ++-.... .. . ..+.++++.++. ..++.+.|.++||.+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~~~~~~ 349 (385)
T 2bkw_A 275 LEEGLHKRWDLHREMSDWFKDSLVNG-LQLTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLKSHGVVIAGGIHKDIG 349 (385)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHTT-TCCEESSCSSSTTBCSSCEEEECSC----HHHHHHHHHHTTEECBCCCCTTTG
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHh-cCceecccCcccccCCceEEEecCC----HHHHHHHHHHCCeEEeCCCCcccC
Confidence 54 235677778888888888 43 3211111 10 1 246788888754 5788999999999998752
Q ss_pred CCEEEEe-cc---CcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 NNIIRLS-PA---LNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 ~~~lR~~-~~---~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.+++|++ +. +.++++++++++++|++++++
T Consensus 350 ~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 350 PKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp GGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 5789999 44 256999999999999988754
No 158
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.82 E-value=4.4e-19 Score=150.73 Aligned_cols=216 Identities=14% Similarity=0.108 Sum_probs=147.4
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHh-hCCEEEEeccccccCccCcccccccCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ-YNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~-~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++ ||+++|+||+|.++... .+. . +
T Consensus 129 ~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~~~-~~~--~-~-- 198 (404)
T 1e5e_A 129 VDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPMIT-NPV--D-F-- 198 (404)
T ss_dssp EEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTTTC-CGG--G-G--
T ss_pred EEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhhhC-Ccc--c-c--
Confidence 55678888888 5444568999999999999997775 9999999999 99999999999865321 121 1 2
Q ss_pred CCCEEE--eecccc-CCccch-heeEeChhhhh-ccCCCCCCC-CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALS-GGLYPI-SAVLADDEVMG-TLVPGTHGS-TYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 82 ~~~~~~--~sK~~~-~g~~~~-g~~~~~~~~~~-~l~~~~~~~-~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
..|+++ +||+++ +| .|+ ||+++++++++ .+.+..... ....+++.+.++.++++.+. ...++..++...+.
T Consensus 199 ~~di~~~S~sK~~~~~g-~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~ 275 (404)
T 1e5e_A 199 GVDVVVHSATKYINGHT-DVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLN--IRMKAESENAMKVA 275 (404)
T ss_dssp TCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHH
T ss_pred CCEEEEEcCccccCCCC-CCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHH
Confidence 346654 789999 57 887 99999998877 776654443 44567888777777776432 23444566666666
Q ss_pred HHHHhhcC-------CCCCCe---------EeeeceeEEEEecCCchhHHHHHHHHHHCCceecc---------------
Q psy6548 156 SELRSRLS-------PDIVPV---------VRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP--------------- 204 (242)
Q Consensus 156 ~~l~~~l~-------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~--------------- 204 (242)
+.+ +..+ ...... ..+.|.++.++++.. .+...+.+.+.||++..
T Consensus 276 ~~l-~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~ 351 (404)
T 1e5e_A 276 EYL-KSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG---FEGAKKLLDNLKLITLAVSLGGCESLIQHPAS 351 (404)
T ss_dssp HHH-HTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH---HHHHHHHHHTCSSSEESSCCCSSSCEEECGGG
T ss_pred HHH-HhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC---HHHHHHHHHhCCCceeccCCCCcceeeecccc
Confidence 777 4332 011000 112366777777542 34455566677874322
Q ss_pred -------------CC--CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 205 -------------IS--NNIIRLSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 205 -------------~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
.+ ++++|+++.. |+++++++.|+++++.+.+.
T Consensus 352 ~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 352 MTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALLRS 398 (404)
T ss_dssp TTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHHCC
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHHHh
Confidence 11 5799999554 78999999999999876654
No 159
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.82 E-value=1.2e-19 Score=150.86 Aligned_cols=199 Identities=11% Similarity=0.061 Sum_probs=129.8
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC--ccCcccccccCC--CCCCEEE--eeccccC
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG--RTGKLLAIHYED--VRPDIVI--LGKALSG 94 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~--~~g~~~~~~~~~--~~~~~~~--~sK~~~~ 94 (242)
++++|++++++ ++| .+++.+++++|+++|++||+++|+||+|..+. ..+.. ....+ ...|+++ ++|+ +
T Consensus 141 ~~~~v~~~~~~-~tG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~sK~-g- 214 (356)
T 1v72_A 141 QPACVSITQAT-EVG-SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEMTWKAGVDALSFGATKN-G- 214 (356)
T ss_dssp EEEEEEEESSC-TTS-CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTTTGGGTCCEEEECCGGG-T-
T ss_pred CceEEEEEcCC-CCC-ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHhhhhhcCCEEEEecccC-C-
Confidence 78999999976 477 56678999999999999999999999996431 11211 11111 1345555 6798 4
Q ss_pred Cccchh--eeEeChhhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy6548 95 GLYPIS--AVLADDEVMGTLVPGT-HGSTYGGNPLACKLAMTALDVILEE---NMIENAYKMGEIFRSELRSRLSPDIVP 168 (242)
Q Consensus 95 g~~~~g--~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~a~l~~~~~~---~~~~~~~~~~~~l~~~l~~~l~~~~~~ 168 (242)
.|.| ++++++++++.+.... ..++.... +..++.++++.++++ ++.++.+++++++++.| +.+.. +..
T Consensus 215 --~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~g-~~~ 288 (356)
T 1v72_A 215 --VLAAEAIVLFNTSLATEMSYRRKRAGHLSSK--MRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGL-EGLGG-VEV 288 (356)
T ss_dssp --CSSCEEEEESSGGGHHHHHHHHHHTTCCCSS--THHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-TTCTT-EEE
T ss_pred --CcCccEEEEECHHHHhhHHHHhhccCchhhh--HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hhCCC-cEE
Confidence 3455 7878888877654321 11221111 122223334444332 24566777888888888 55431 111
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
..+..++++|+.++ .++.+.|.++||.+.++. ++++|++++..++++++++++++|++++++.
T Consensus 289 ~~~~~~~~~~~~~~------~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 289 LGGTEANILFCRLD------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ESCCCSSEEEEEEC------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred ccCCCccEEEEEcC------HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 12345667777764 268889999999998653 6899999999999999999999999887654
No 160
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.82 E-value=8.5e-20 Score=152.24 Aligned_cols=215 Identities=13% Similarity=0.032 Sum_probs=141.3
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc--cCccCcccccccCCCCCCEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--LGRTGKLLAIHYEDVRPDIV- 86 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~--~~~~g~~~~~~~~~~~~~~~- 86 (242)
|+++ +... +++++++++++|++|+.+++.+++++|+++|++||+++|+||+|.. .+..+.... .+....|++
T Consensus 126 d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~d~~~ 201 (357)
T 3lws_A 126 TLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAA--EIAGLFDSIY 201 (357)
T ss_dssp CHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHH--HHHTTSSEEE
T ss_pred CHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChH--HHHhcCCEEE
Confidence 4555 3332 3889999999998855788889999999999999999999999851 111221111 001123444
Q ss_pred -EeeccccCCccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcC
Q psy6548 87 -ILGKALSGGLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLS 163 (242)
Q Consensus 87 -~~sK~~~~g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 163 (242)
++||+++++ .+ |++++++++++.+.... .+.+.......++++.++++... +. .++.+++++++.+.| ++++
T Consensus 202 ~s~sK~~~~~-~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~l~~~L-~~~~ 276 (357)
T 3lws_A 202 ISFYKGLGGI-AG-AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRK-DR-MGQYYEQAKQLAEQF-NALP 276 (357)
T ss_dssp EESSSTTCCS-SC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHH-HTST
T ss_pred EeccccCCCC-ce-EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHH-HhCC
Confidence 589999654 33 88999998888775321 22222223333444455665422 22 344677788899999 6653
Q ss_pred CCCCCeEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccC-----CCCEEEEecc---CcCCHHHHHHHHHHHHHHH
Q psy6548 164 PDIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPI-----SNNIIRLSPA---LNITEQELREGLDIIINTI 234 (242)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~-----~~~~lR~~~~---~~~t~e~i~~~~~~l~~~l 234 (242)
.......+..++++|+.++... .+..++.+.|.++||.+.++ +..++|++.. ...+.+++++++++|.+++
T Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 277 GVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp TEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 2111012345778899887642 23678899999999999876 2348999865 3468899999999998764
No 161
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.82 E-value=9e-19 Score=146.99 Aligned_cols=212 Identities=12% Similarity=0.121 Sum_probs=146.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI-- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~-- 87 (242)
|+++ +...+.++++|++++++|++|.+.+ +++|.++|++||++ |+||+|+ ++... .....+ .+|+++
T Consensus 127 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~di~~~s 196 (382)
T 4eb5_A 127 DVSFIDQKLRDDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE--VDVEKI--GADMLTIS 196 (382)
T ss_dssp CHHHHHHHCCTTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC--CCHHHH--TCSEEEEE
T ss_pred CHHHHHHHhcCCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc--cCcccc--CCCEEEee
Confidence 5666 4333457999999999999998776 89999999999999 9999996 33221 111112 356666
Q ss_pred eeccccCCccchheeEeChhhhhccCCCCC-------CCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Q psy6548 88 LGKALSGGLYPISAVLADDEVMGTLVPGTH-------GSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 88 ~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l 158 (242)
++|.++. .++|+++++++. .+.+... ....+.+...+.++.++++.+.+ +++.++.+++++++.+.|
T Consensus 197 ~sK~~g~--~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 272 (382)
T 4eb5_A 197 SNDIYGP--KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNV 272 (382)
T ss_dssp TGGGTCC--SSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhcCC--CceEEEEEcccc--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 5698662 247888887663 2332211 11234456666666677776544 346677888888888888
Q ss_pred HhhcCCCCCCeEe--eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------------CCEEEEe
Q psy6548 159 RSRLSPDIVPVVR--GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-----------------------NNIIRLS 213 (242)
Q Consensus 159 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----------------------~~~lR~~ 213 (242)
+.++........ ..+.++++.++. .+..++.+.|.++||.+.++. .+.+|++
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (382)
T 4eb5_A 273 -LKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLT 349 (382)
T ss_dssp -TTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEE
T ss_pred -hhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEE
Confidence 655321011111 125567777764 467889999999999998752 4789999
Q ss_pred ccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 214 PALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 214 ~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
++..++++++++++++|+++++++..
T Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 350 LGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999988764
No 162
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4.5e-19 Score=154.42 Aligned_cols=217 Identities=9% Similarity=0.046 Sum_probs=146.4
Q ss_pred hhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCcc-----Cc----ccccccCCC
Q psy6548 12 VPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT-----GK----LLAIHYEDV 81 (242)
Q Consensus 12 ~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~-----g~----~~~~~~~~~ 81 (242)
+++ +...+.++++|+++++++++|.+.+ +++|+++|++||+++|+||+|.++... +. .+.....+
T Consensus 196 ~~~l~~~i~~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g- 270 (497)
T 3mc6_A 196 LGKVKKFINKNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPG- 270 (497)
T ss_dssp TTTTGGGCCSSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTT-
T ss_pred HHHHHHHHhhCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCC-
Confidence 555 4444568999999999999997765 789999999999999999999764221 11 12222223
Q ss_pred CCCEEE--eeccccCCccchheeEeChhhhhccCCC----CCCCC-----C--CCCHHHHHHHHHHHHHHHh---ccHHH
Q psy6548 82 RPDIVI--LGKALSGGLYPISAVLADDEVMGTLVPG----THGST-----Y--GGNPLACKLAMTALDVILE---ENMIE 145 (242)
Q Consensus 82 ~~~~~~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~----~~~~~-----~--~~~~~~~~~a~a~l~~~~~---~~~~~ 145 (242)
.|+++ ++|++.+| .++|+++.+++.+...... ..+.. + +.+....++.+++++.+.. +++.+
T Consensus 271 -~d~~~~s~~K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~ 348 (497)
T 3mc6_A 271 -VTSISCDTHKYGFAP-KGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQ 348 (497)
T ss_dssp -CCEEEEETTTTTCCC-SSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CcEEEECchhhcCCC-CCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHH
Confidence 46666 44988888 8899998876655443211 11111 1 1112234445556665544 34567
Q ss_pred HHHHHHHHHHHHHHhh-cCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-CCEEEEeccCcCCHHHH
Q psy6548 146 NAYKMGEIFRSELRSR-LSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS-NNIIRLSPALNITEQEL 223 (242)
Q Consensus 146 ~~~~~~~~l~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~~~lR~~~~~~~t~e~i 223 (242)
+..++++++++.| ++ ++. +....+..+.++.+.... .+..++.+.|.++||.+.... +..+|++++ ..+++++
T Consensus 349 ~~~~~~~~l~~~L-~~~~~g-~~~~~~~~~~~v~~~~~~--~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i 423 (497)
T 3mc6_A 349 EIVGAAMKFKKYI-QENIPD-LDIMGNPRYSVISFSSKT--LNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVV 423 (497)
T ss_dssp HHHHHHHHHHHHH-HHSCTT-CEECSCCCSSEEEEECTT--TTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTH
T ss_pred HHHHHHHHHHHHH-HhcCCC-EEEecCCCeeEEEEeCCC--CCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCCHHHH
Confidence 7888999999999 66 442 111112345566666543 468899999999999987653 457899988 6799999
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy6548 224 REGLDIIINTINTMAAK 240 (242)
Q Consensus 224 ~~~~~~l~~~l~~~~~~ 240 (242)
+++++.|+++++++.++
T Consensus 424 ~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 424 DEICDILRTTVQELKSE 440 (497)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999887543
No 163
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.81 E-value=3.2e-20 Score=159.75 Aligned_cols=205 Identities=10% Similarity=0.086 Sum_probs=136.9
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc---ccccccC-CCCCC---EEEeeccc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK---LLAIHYE-DVRPD---IVILGKAL 92 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~-~~~~~---~~~~sK~~ 92 (242)
.++++++++.++|++|. .++.+.+++|+++|++||+++|+||+|.+|+..+. ......+ +..++ +.++||.+
T Consensus 201 ~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 279 (448)
T 3meb_A 201 EKSIFLFHACAHNPSGI-DFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF 279 (448)
T ss_dssp TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS
T ss_pred CCcEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC
Confidence 46888888999999995 56778899999999999999999999988765441 1111111 12334 33389999
Q ss_pred c-CCccchhee--Ee--------C-h----hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHH
Q psy6548 93 S-GGLYPISAV--LA--------D-D----EVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL--------EENMIENAY 148 (242)
Q Consensus 93 ~-~g~~~~g~~--~~--------~-~----~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~--------~~~~~~~~~ 148 (242)
+ .| +|+||+ ++ + + ++++.+.......+.+.+.+++.++.++++... -++..++++
T Consensus 280 g~~G-~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~ 358 (448)
T 3meb_A 280 GLYG-ERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIH 358 (448)
T ss_dssp CCGG-GCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-ccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 9 78 999997 55 3 4 555555432233344556677766666654321 134567788
Q ss_pred HHHHHHHHHHHhhcC-CC------CCCeEeeeceeEEEEecCCchhHHHHHHHH-HHCCceeccCCCCEEEEeccCcCCH
Q psy6548 149 KMGEIFRSELRSRLS-PD------IVPVVRGKGLLNAIVLDKSILEVYDVCIKM-KDAGLVTKPISNNIIRLSPALNITE 220 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~lR~~~~~~~t~ 220 (242)
++++.+++.| +.++ .. .....+..+++.|+.++ .++...| .++||.+.|+. + |+++.. .++
T Consensus 359 ~~r~~l~~~L-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~gV~v~~G~-g--Ris~a~-~~~ 427 (448)
T 3meb_A 359 RMRSLLHASL-AKRKTPGPGSKGTWDHILTAIGMFTFTGLT------PEHVDYLKEKWSIYLVKAG-G--RMSMCG-LTE 427 (448)
T ss_dssp HHHHHHHHHH-HHTTCCCSTTTCCCTHHHHCCSSEEECCCC------HHHHHHHHHHHCEEECSGG-G--EEEGGG-CCT
T ss_pred HHHHHHHHHH-HhhCCCCcCcccccceeCCCceEEEecCCC------HHHHHHHHHhCCEEEeCCC-c--EEEEec-CCH
Confidence 8888999999 6653 11 22223345666665442 2445555 56799999863 2 888643 377
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6548 221 QELREGLDIIINTINTM 237 (242)
Q Consensus 221 e~i~~~~~~l~~~l~~~ 237 (242)
+++++++++|+++++++
T Consensus 428 ~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 428 SNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp TTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 78999999999998854
No 164
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.80 E-value=5.6e-20 Score=156.15 Aligned_cols=203 Identities=15% Similarity=0.160 Sum_probs=133.2
Q ss_pred CCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc---ccccccC-CCCCCEE---Eeecc
Q psy6548 20 PNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK---LLAIHYE-DVRPDIV---ILGKA 91 (242)
Q Consensus 20 ~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~-~~~~~~~---~~sK~ 91 (242)
++++++++.+. |||+| ..++++.+++|+++|++||+++|+||+|.+|...+. ......+ ....+++ +|||.
T Consensus 172 ~~~~~i~l~~~~~NPTG-~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 250 (405)
T 3k7y_A 172 PNGSSVILQISCYNPCS-VNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKN 250 (405)
T ss_dssp CSSCEEEECCSSCTTTC-CCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTT
T ss_pred CCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCcc
Confidence 45677777765 89999 566889999999999999999999999998754321 0111111 1223433 38999
Q ss_pred cc-CCccchheeEe---ChhhhhccCCC---CCCCCC-CCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHHHHHH
Q psy6548 92 LS-GGLYPISAVLA---DDEVMGTLVPG---THGSTY-GGNPLACKLAMTALDVI------LE--ENMIENAYKMGEIFR 155 (242)
Q Consensus 92 ~~-~g~~~~g~~~~---~~~~~~~l~~~---~~~~~~-~~~~~~~~~a~a~l~~~------~~--~~~~~~~~~~~~~l~ 155 (242)
|+ +| +|+||+++ ++++++.+... .....+ +.+.+++.++.++++.- .+ ..+.+.++++++.+.
T Consensus 251 ~~l~G-lRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~ 329 (405)
T 3k7y_A 251 MSLYG-ERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFF 329 (405)
T ss_dssp SCCTT-TTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 99 99999753 56555444211 011222 34556666655555431 11 234566888899999
Q ss_pred HHHHh----hcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHH
Q psy6548 156 SELRS----RLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDI 229 (242)
Q Consensus 156 ~~l~~----~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~ 229 (242)
+.| + .++. .+....+..|+++|+.++. +++++|.++||.+.|++ ||++.. .+++++++++++
T Consensus 330 ~~L-~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------~~~~~L~~~gV~v~p~~----Ris~a~-~~~~~i~~~~~~ 397 (405)
T 3k7y_A 330 NKL-ETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------KIAEHLKTHHIYIINNG----RINVSG-ITKNNVDYIADK 397 (405)
T ss_dssp HHH-HHHGGGGTCCCCGGGGSSCCSSEEECGGGG------GGTTTTTTTTEECCTTS----EEEGGG-CCTTHHHHHHHH
T ss_pred HHH-HhhhhhcCCCCCCccccCCceEEEecCCCH------HHHHHHHHCCEeecCCC----eEEEec-cCHHHHHHHHHH
Confidence 999 5 6642 1222234567788876543 33456678899999964 998442 377899999999
Q ss_pred HHHHHHH
Q psy6548 230 IINTINT 236 (242)
Q Consensus 230 l~~~l~~ 236 (242)
|++++..
T Consensus 398 i~~~~~~ 404 (405)
T 3k7y_A 398 ICLSLSQ 404 (405)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988764
No 165
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.80 E-value=9.9e-20 Score=151.52 Aligned_cols=202 Identities=13% Similarity=0.113 Sum_probs=129.9
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccccc--CccCcccccccCC--CCCCEEE--eeccccC
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGL--GRTGKLLAIHYED--VRPDIVI--LGKALSG 94 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~--~~~g~~~~~~~~~--~~~~~~~--~sK~~~~ 94 (242)
++++|+++++ +++|.+. +.+++++|+++|++||+++|+||+|.+| +..+.. ....+ ..+|+++ .+|. ++
T Consensus 145 ~~~~v~~~~~-~ptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~-g~ 219 (359)
T 1svv_A 145 IPKLVYISNT-TEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLTDMFYIGATKA-GG 219 (359)
T ss_dssp EEEEEEEESS-CTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCSEEEEECTTT-TC
T ss_pred CceEEEEEcC-CCCceec-CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCCEEEEecccC-CC
Confidence 4899999988 6788555 5689999999999999999999999654 322211 11101 2356666 4575 44
Q ss_pred CccchheeEeChhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCCCCCeEee
Q psy6548 95 GLYPISAVLADDEVMGTLVPGT--HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSPDIVPVVRG 172 (242)
Q Consensus 95 g~~~~g~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 172 (242)
. .++|+++.++++++.+.+.. .+.++..+.....+..++++...-+++.++++++++++++.| +..+ +....+.
T Consensus 220 ~-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~--~~~~~~~ 295 (359)
T 1svv_A 220 M-FGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACG--IRLAWPS 295 (359)
T ss_dssp S-SCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTT--CCBSSCC
T ss_pred C-CceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCC--eEEccCC
Confidence 4 56788888888877665421 222233233332222222221001346677888888888888 5432 2111133
Q ss_pred eceeEEEEecCCchhHHHHHHHHHHC-Cceecc---CCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 173 KGLLNAIVLDKSILEVYDVCIKMKDA-GLVTKP---ISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~---~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.++++++.++ .++.++|.++ ||.+.+ .+++++|++++...+++++++++++|+++++++
T Consensus 296 ~~~~~~~~~~------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 296 ASNQLFPILE------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp SSSEECBEEE------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ccceEEEEcC------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 4566666553 3688899999 999854 246789999988899999999999999887654
No 166
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.80 E-value=8.2e-19 Score=148.72 Aligned_cols=213 Identities=15% Similarity=0.138 Sum_probs=144.0
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|..+. .+... .++
T Consensus 132 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~-~~~~~---~~~-- 201 (398)
T 1gc0_A 132 LRHVDMADLQALEAAMTPATRVIYFESPANPNMHMAD----IAGVAKIARKHGATVVVDNTYCTPY-LQRPL---ELG-- 201 (398)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHGGGTCEEEEECTTTHHH-HCCGG---GGT--
T ss_pred EEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hhC--
Confidence 44567788888 4444568999999999999998775 9999999999999999999996431 12111 123
Q ss_pred CCEE--EeeccccC-Cccch-heeEeChhhhh-ccCCCCCC-CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 83 PDIV--ILGKALSG-GLYPI-SAVLADDEVMG-TLVPGTHG-STYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 83 ~~~~--~~sK~~~~-g~~~~-g~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
.|++ +++|++++ | .|+ |+++++++.++ .+.+.... .+.+.+++.+.++.++++.+ +...+...++...+.+
T Consensus 202 ~d~~~~S~sK~~~~~~-~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~ 278 (398)
T 1gc0_A 202 ADLVVHSATKYLSGHG-DITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL--NLRMDRHCANAQVLAE 278 (398)
T ss_dssp CSEEEEETTTTTTCSS-SCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHH
T ss_pred ceEEEECCccccCCCC-CCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH--HHHHHHHHHHHHHHHH
Confidence 4555 47899994 5 676 88888877655 45543333 34456788777776666643 2245566777777778
Q ss_pred HHHhhcCC-------CC--------C-CeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc---C------------
Q psy6548 157 ELRSRLSP-------DI--------V-PVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP---I------------ 205 (242)
Q Consensus 157 ~l~~~l~~-------~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~------------ 205 (242)
.| +.++. .. . ....+.+.++.+.++.. .+...+.+.+.|+.+.. +
T Consensus 279 ~L-~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~ 354 (398)
T 1gc0_A 279 FL-ARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG---IGAGRRFMNALQLFSRAVSLGDAESLAQHPASM 354 (398)
T ss_dssp HH-HTCTTEEEEEEC----------------CCTTEEEEEETTH---HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGT
T ss_pred HH-hcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC---HHHHHHHHHhCCCceeccCCCCcceeeeccccc
Confidence 78 54321 00 0 00124577888887642 34455666677766532 1
Q ss_pred ---------------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 ---------------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 ---------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
.++.+|++++...++++++.+.+.|+++
T Consensus 355 ~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 355 THSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp TTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 1479999999998999999988888764
No 167
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.80 E-value=2.3e-18 Score=149.20 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=149.3
Q ss_pred ccccCCC-----Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccc
Q psy6548 4 QFPVKSK-----QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 77 (242)
Q Consensus 4 ~~~~~~~-----d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 77 (242)
++.+|.+ |+++ +...++++++|+++++ |++|.+. +.+++|+++|++||+++|+||+|.... .|.. ...
T Consensus 180 vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~---~~l~~i~~l~~~~g~~li~Dea~~~~~-~g~~-~~~ 253 (474)
T 1wyu_B 180 VREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFE---RRILEISRLCKEAGVQLYYDGANLNAI-MGWA-RPG 253 (474)
T ss_dssp EEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGGT-TTTC-CHH
T ss_pred EEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccC---CCHHHHHHHHHHcCCEEEEeCchhhhh-ccCC-Ccc
Confidence 4455654 6777 4444567999999986 5678652 239999999999999999999996421 2211 111
Q ss_pred cCCCCCCEEEe--eccccC-----CccchheeEeChhhhhccCCCC-------------------CCCCCCCCHHHHHHH
Q psy6548 78 YEDVRPDIVIL--GKALSG-----GLYPISAVLADDEVMGTLVPGT-------------------HGSTYGGNPLACKLA 131 (242)
Q Consensus 78 ~~~~~~~~~~~--sK~~~~-----g~~~~g~~~~~~~~~~~l~~~~-------------------~~~~~~~~~~~~~~a 131 (242)
.+ .+|++++ +|+|++ | .++|++++++++++.+.... ...+++.+++++.++
T Consensus 254 ~~--g~di~~~s~~K~~~~p~g~gG-~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 330 (474)
T 1wyu_B 254 DM--GFDVVHLNLHKTFTVPHGGGG-PGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRA 330 (474)
T ss_dssp HH--TCSEEECCTTTTTCCCCTTSC-CCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHH
T ss_pred cC--CCcEEEEeCccccccCCCCCC-CCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHH
Confidence 12 3688885 798873 4 58999999998887775210 012234677777777
Q ss_pred HHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC---
Q psy6548 132 MTALDVILEEN---MIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--- 205 (242)
Q Consensus 132 ~a~l~~~~~~~---~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--- 205 (242)
++.++.+..+. ..++.+++++++++.| ++++-.... .......+++.++.. .+..++.++|.++||.+...
T Consensus 331 ~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L-~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~L~~~Gi~~~~~~~~ 407 (474)
T 1wyu_B 331 WAYIRTLGLEGLKKAAALAVLNARYLKELL-KEKGYRVPY-DGPSMHEFVAQPPEG-FRALDLAKGLLELGFHPPTVYFP 407 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCBCSS-CSSCCSCEEEBCSTT-CCHHHHHHHHHHTTCCCCEESCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCcEecC-CCCcceEEEEEcCCC-CCHHHHHHHHHHCCccccccccc
Confidence 77776543333 4677888999999999 555311111 111111145555322 46789999999999986311
Q ss_pred --CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 206 --SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 206 --~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
..+.+|++++...+++++++++++|++++++
T Consensus 408 ~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 408 LIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp TTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred cccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 2578999998888999999999999988753
No 168
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.80 E-value=9.8e-20 Score=157.21 Aligned_cols=214 Identities=12% Similarity=0.162 Sum_probs=139.5
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|... ....+ .. ..
T Consensus 199 v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~g-~~~~~--~~---~~ 268 (464)
T 1ibj_A 199 VKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMSP-VLSRP--LE---LG 268 (464)
T ss_dssp EEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTCT-TTCCG--GG---TT
T ss_pred EEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCccc-ccCCh--hh---cC
Confidence 45678888888 5544578999999999999997775 999999999999999999999631 11111 11 24
Q ss_pred CCEEE--eeccccC--CccchheeEeCh-hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6548 83 PDIVI--LGKALSG--GLYPISAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSE 157 (242)
Q Consensus 83 ~~~~~--~sK~~~~--g~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~ 157 (242)
.|+++ ++|++++ | +++|++++++ ++++.+........+..+++.+.++.++++.+.. ..+....+...+.+.
T Consensus 269 ~div~~S~sK~~~g~~G-l~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~--r~~~~~~~~~~l~~~ 345 (464)
T 1ibj_A 269 ADIVMHSATKFIAGHSD-VMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMY 345 (464)
T ss_dssp CSEEEEETTTTTTCSSC-CCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHH
T ss_pred CEEEEECCcccccCCCC-CcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHHH
Confidence 57665 7899985 7 7889999884 7777665432112334567777776666653321 112222233333444
Q ss_pred HHhhcC-------CCCC---------CeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC---------------
Q psy6548 158 LRSRLS-------PDIV---------PVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--------------- 206 (242)
Q Consensus 158 l~~~l~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--------------- 206 (242)
+ +..+ .... ....+.|.++++.+... .....+.+.|...||.+++++
T Consensus 346 l-~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~-~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~ 423 (464)
T 1ibj_A 346 L-SSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV-ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHAS 423 (464)
T ss_dssp H-HTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCH-HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCS
T ss_pred H-HhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCH-HHHHHHHHhcCcceEeecCCCCceeeeccccccccc
Confidence 4 2211 0000 01123467888888532 234568888877777765442
Q ss_pred ------------CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 ------------NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 ------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
++++|++++. |++++++++|++++++
T Consensus 424 ~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 424 IPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred CCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 4689999665 8999999999998865
No 169
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=8.3e-19 Score=151.43 Aligned_cols=220 Identities=15% Similarity=0.089 Sum_probs=140.9
Q ss_pred Chhh--hcCCC---CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc--c--------CccCcccc
Q psy6548 11 QVPA--KLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG--L--------GRTGKLLA 75 (242)
Q Consensus 11 d~~~--~~~~~---~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~--~--------~~~g~~~~ 75 (242)
|+++ +.+.+ +++++|++++++|++|+.+++.+++++|+++|++||+++|+||++.. . +..+...
T Consensus 168 d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~- 246 (467)
T 1ax4_A 168 DIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATI- 246 (467)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCH-
T ss_pred CHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCch-
Confidence 5666 34433 47999999999999966888899999999999999999999998742 1 1112110
Q ss_pred cccCC----CCCCEEE--eeccccCCccch-heeEeC-h-hhhhccCCCC----CCCCCCCCHHH-HHHHHHHHHHHHhc
Q psy6548 76 IHYED----VRPDIVI--LGKALSGGLYPI-SAVLAD-D-EVMGTLVPGT----HGSTYGGNPLA-CKLAMTALDVILEE 141 (242)
Q Consensus 76 ~~~~~----~~~~~~~--~sK~~~~g~~~~-g~~~~~-~-~~~~~l~~~~----~~~~~~~~~~~-~~~a~a~l~~~~~~ 141 (242)
...+ ..+|+++ ++|+++ .++ |+++++ + ++++.+.... ...+++..+.. +.++.++++....+
T Consensus 247 -~~~~~~~~~~~d~~~~s~sK~~g---~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 322 (467)
T 1ax4_A 247 -KEVIFDMYKYADALTMSAKKDPL---LNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEE 322 (467)
T ss_dssp -HHHHHHHGGGCSEEEEETTSTTC---CSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCH
T ss_pred -hhhhhhhccccceEEEeccccCC---CCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhh
Confidence 0000 1245554 668886 444 456566 5 6766553211 11233333332 22222245543333
Q ss_pred cHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEE-------ecCCchhHHHHHHHH-HHCCceecc-C-------
Q psy6548 142 NMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIV-------LDKSILEVYDVCIKM-KDAGLVTKP-I------- 205 (242)
Q Consensus 142 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l-~~~gi~~~~-~------- 205 (242)
+...+..++++++++.| ++.+ +....+..++++|+. ++....+..++.+.| .++||.+.+ +
T Consensus 323 ~~~~~~~~~~~~l~~~L-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~ 399 (467)
T 1ax4_A 323 EYLHYRIGQVKYLGDRL-REAG--IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRD 399 (467)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTT--CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBC
T ss_pred hHHHHHHHHHHHHHHHH-HhCC--CCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccc
Confidence 34555567788899999 5532 221123456778887 432213577899999 889999977 2
Q ss_pred ---C------CCEEEEecc-CcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 206 ---S------NNIIRLSPA-LNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 206 ---~------~~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+ .+++|++++ ...|++++++++++|++++++..
T Consensus 400 ~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 400 PATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp TTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 1 278999987 44899999999999999888753
No 170
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.80 E-value=3.7e-19 Score=150.66 Aligned_cols=214 Identities=14% Similarity=0.147 Sum_probs=146.0
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|+.. ... ...+..
T Consensus 133 ~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~g~~li~D~~~~~~-~~~-----~~~~~~ 202 (392)
T 3qhx_A 133 YTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIAD----IAGIAQLGADSSAKVLVDNTFASP-ALQ-----QPLSLG 202 (392)
T ss_dssp EEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT-TTC-----CGGGGT
T ss_pred EEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEec----HHHHHHHHHHcCCEEEEECCCccc-ccC-----ChHHhC
Confidence 45678888988 5555568999999999999997765 999999999999999999999632 111 112345
Q ss_pred CCEEE--eeccccC-CccchheeEeC-hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q psy6548 83 PDIVI--LGKALSG-GLYPISAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 83 ~~~~~--~sK~~~~-g~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l 158 (242)
+|+++ ++|.+++ |-.++|+++++ +++++.+.......+...+++.+.++...++.+.. ..++..++...+.+.|
T Consensus 203 ~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L 280 (392)
T 3qhx_A 203 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFL 280 (392)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHH
Confidence 68777 7899994 32578999887 57777766543444556777777666666554332 3456677778888888
Q ss_pred HhhcCCC-------CCC---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-----------------
Q psy6548 159 RSRLSPD-------IVP---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------------- 205 (242)
Q Consensus 159 ~~~l~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------------- 205 (242)
+..+.. ... ...+.|.++++.++.+....+.+.+.|...|+.++.+
T Consensus 281 -~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~ 359 (392)
T 3qhx_A 281 -AEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHAST 359 (392)
T ss_dssp -HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGG
T ss_pred -hcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCccccccccc
Confidence 554320 000 0133478999999874346777888877666665432
Q ss_pred -------CCCEEEEeccCcCCHHHHHHHHHHH
Q psy6548 206 -------SNNIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 206 -------~~~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
.++.+|+++....+++.++.+.+.|
T Consensus 360 ~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 360 AGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp BTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 2467999977666665565555544
No 171
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.80 E-value=3.2e-18 Score=146.30 Aligned_cols=216 Identities=19% Similarity=0.207 Sum_probs=143.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhC----------CEEEEeccccccCccCcccccccC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN----------VLFIADEVQTGLGRTGKLLAIHYE 79 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~----------~~li~De~~~~~~~~g~~~~~~~~ 79 (242)
|+++ +...++++++|++++++|++|.+.+ +++|.++|++|| +++|+||+|. ++... ....
T Consensus 164 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~-~~~~~--~~~~-- 234 (432)
T 3a9z_A 164 EVEDILAAVRPTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQA-LGKRR--VDVE-- 234 (432)
T ss_dssp CHHHHHHTCCTTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-TTTSC--CCHH--
T ss_pred CHHHHHHhccCCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhh-hCCcc--cChh--
Confidence 4555 4444567999999999999998776 789999999999 9999999995 32221 1111
Q ss_pred CCCCCEEE--eeccccCCccchheeEeChhh-hhccCCCCCC-------CCCCCCHHHHHHHHHHHHHHHh--ccHHHHH
Q psy6548 80 DVRPDIVI--LGKALSGGLYPISAVLADDEV-MGTLVPGTHG-------STYGGNPLACKLAMTALDVILE--ENMIENA 147 (242)
Q Consensus 80 ~~~~~~~~--~sK~~~~g~~~~g~~~~~~~~-~~~l~~~~~~-------~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~ 147 (242)
...+|+++ ++|++| .++||++++++. ...+.+...+ ..++.++.+++++.++++.+.+ +++.+++
T Consensus 235 ~~~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~ 311 (432)
T 3a9z_A 235 DLGVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHM 311 (432)
T ss_dssp HHCCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 12457666 589875 569999998765 4445443221 2345677777777778886654 4567888
Q ss_pred HHHHHHHHHHHHhhc-CCCCC--C---eEeeeceeEEEEecCCchhHHHHHHHHH----HCCceeccC------------
Q psy6548 148 YKMGEIFRSELRSRL-SPDIV--P---VVRGKGLLNAIVLDKSILEVYDVCIKMK----DAGLVTKPI------------ 205 (242)
Q Consensus 148 ~~~~~~l~~~l~~~l-~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~gi~~~~~------------ 205 (242)
+++++++.+.| +++ +..+. . .....+.+.++.++....+..++.+.+. +.|+.+.+.
T Consensus 312 ~~~~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~ 390 (432)
T 3a9z_A 312 RDIRDYLEERL-EAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSC 390 (432)
T ss_dssp HHHHHHHHHHH-HHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHT
T ss_pred HHHHHHHHHHH-HhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhc
Confidence 88999999998 553 21110 0 0112344666777652123455555442 223333221
Q ss_pred ------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 206 ------SNNIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 206 ------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
..+++|++++..+|++|+++++++|+++++++.+
T Consensus 391 g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 391 GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp TCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1378999999888999999999999999887643
No 172
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.79 E-value=1.8e-18 Score=146.60 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=139.5
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC-ccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG-RTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...+.++++|+++ +++|.+.+ +++|+++|++||+++|+||+|+.+. ..+. .++..+|++++
T Consensus 140 d~~~l~~~i~~~~~~v~~~---n~tG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-----~~~~~~di~~~ 207 (399)
T 2oga_A 140 DPLLVEKAITPRTRALLPV---HLYGHPAD----MDALRELADRHGLHIVEDAAQAHGARYRGR-----RIGAGSSVAAF 207 (399)
T ss_dssp CHHHHHHHCCTTEEEECCB---CGGGCCCC----HHHHHHHHHHHTCEECEECTTCTTCEETTE-----ETTCTTCEEEE
T ss_pred CHHHHHHhcCCCCeEEEEe---CCcCCccC----HHHHHHHHHHcCCEEEEECcccccCccCCe-----ecccccCEEEE
Confidence 5666 43334578888753 45776654 9999999999999999999996321 1121 12333578776
Q ss_pred ----eccccC-CccchheeEeC-hhhhhccCCCC-C-----------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Q psy6548 89 ----GKALSG-GLYPISAVLAD-DEVMGTLVPGT-H-----------GSTYGGNPLACKLAMTALDVILEENMIENAYKM 150 (242)
Q Consensus 89 ----sK~~~~-g~~~~g~~~~~-~~~~~~l~~~~-~-----------~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~ 150 (242)
||++++ | ++|+++.+ +++++.+.+.. . +.++..+++.++++.++++.++ ++.++.+++
T Consensus 208 S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~ 283 (399)
T 2oga_A 208 SFYPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSAL 283 (399)
T ss_dssp ECCTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHH
T ss_pred eCCCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 499985 5 68888876 77766554311 1 2334567888877777776543 355667777
Q ss_pred HHHHHHHHHhhcCCCCCCeEeeeceeE--EEEecCCchhHHHHHHHHHHCCceeccCCC---------------------
Q psy6548 151 GEIFRSELRSRLSPDIVPVVRGKGLLN--AIVLDKSILEVYDVCIKMKDAGLVTKPISN--------------------- 207 (242)
Q Consensus 151 ~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~--------------------- 207 (242)
++++++.| +.++.......+..+... .+.+.. .+..++.+.|.++||.+++...
T Consensus 284 ~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~ 360 (399)
T 2oga_A 284 AAEYLSGL-AGLPGIGLPVTAPDTDPVWHLFTVRT--ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPR 360 (399)
T ss_dssp HHHHHHHT-TTCTTCBCCCCCTTEECCCSSEEEEC--SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHH
T ss_pred HHHHHHHh-ccCCCccccCCCCCCcceeEEEEEEC--CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChh
Confidence 88888888 555321111111112222 243333 2567899999999999986431
Q ss_pred ------CEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 208 ------NIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 208 ------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+.+|++++..+|++|++++++.|+++++++.
T Consensus 361 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 361 AESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999987653
No 173
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.79 E-value=6.2e-18 Score=140.95 Aligned_cols=206 Identities=15% Similarity=0.095 Sum_probs=144.2
Q ss_pred CChhh-hc-CCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE
Q psy6548 10 KQVPA-KL-KSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 10 ~d~~~-~~-~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
.|+++ +. ..++++++|++++++|++|.+.+ +++++||+++|+||+|+.+... .....+ |+++
T Consensus 128 ~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~~----di~~ 191 (360)
T 1w23_A 128 QSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQF----GMIY 191 (360)
T ss_dssp CSCCCGGGCCCCTTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGGC----SEEE
T ss_pred CCccchHhhccCCCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC---cCcccC----CEEE
Confidence 45566 44 44678999999999999997655 2333899999999999743211 111222 5666
Q ss_pred --eeccccCCccchheeEeChhhhhccCCCC-----------CCCCC-CCCHHHHHHHHHHHHHHHh----ccHHHHHHH
Q psy6548 88 --LGKALSGGLYPISAVLADDEVMGTLVPGT-----------HGSTY-GGNPLACKLAMTALDVILE----ENMIENAYK 149 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~~~~~~~l~~~~-----------~~~~~-~~~~~~~~~a~a~l~~~~~----~~~~~~~~~ 149 (242)
++|.++. .++||+++++++++.+.+.. .+.++ +.+..++.++.++++.+.+ +++.++.++
T Consensus 192 ~s~sK~~~~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 269 (360)
T 1w23_A 192 AGAQKNLGP--SGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEE 269 (360)
T ss_dssp EETTTTTSC--TTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEcccccCC--CCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 5699972 35899999998888776532 11222 3355666666777776543 346778888
Q ss_pred HHHHHHHHHHhhcCCCCCC---eEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHH
Q psy6548 150 MGEIFRSELRSRLSPDIVP---VVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQEL 223 (242)
Q Consensus 150 ~~~~l~~~l~~~l~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i 223 (242)
+++++.+.| +.++. +.. ... ..+.++++.++.. .+..++.+.|.++||.+.++. .+++|++++..++++++
T Consensus 270 ~~~~l~~~L-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i 346 (360)
T 1w23_A 270 KAKIIYDTI-DESNG-FYVGHAEKGSRSLMNVTFNLRNE-ELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDAC 346 (360)
T ss_dssp HHHHHHHHH-HTTTT-SSEESSCGGGBCSSEEEEECSSH-HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHH
T ss_pred HHHHHHHHH-HHccC-cccccCCchhccCcEEEEEcCCC-ccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHH
Confidence 899999999 66642 211 111 2345888888664 467789999999999998763 47899999888899999
Q ss_pred HHHHHHHHHHHHH
Q psy6548 224 REGLDIIINTINT 236 (242)
Q Consensus 224 ~~~~~~l~~~l~~ 236 (242)
++++++|++++++
T Consensus 347 ~~~~~~l~~~~~~ 359 (360)
T 1w23_A 347 IALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987653
No 174
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.79 E-value=4.2e-19 Score=150.32 Aligned_cols=203 Identities=15% Similarity=0.071 Sum_probs=130.7
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc---ccccccC-CCCCCE---EEeecc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK---LLAIHYE-DVRPDI---VILGKA 91 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~-~~~~~~---~~~sK~ 91 (242)
+++++++++++++|++|. ..+.+.+++|+++|++||+++|+||+|.+++..+. ......+ +..+++ .++||.
T Consensus 173 ~~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 251 (401)
T 7aat_A 173 PEKSIILLHACAHNPTGV-DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKN 251 (401)
T ss_dssp CTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTT
T ss_pred CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcc
Confidence 467899999999999995 56778899999999999999999999988755432 1111111 122333 348999
Q ss_pred cc-CCccchheeEe---Chh----hhhccCCCCCCCCCCCCHHHHHHHHHHHHHH------H--hccHHHHHHHHHHHHH
Q psy6548 92 LS-GGLYPISAVLA---DDE----VMGTLVPGTHGSTYGGNPLACKLAMTALDVI------L--EENMIENAYKMGEIFR 155 (242)
Q Consensus 92 ~~-~g~~~~g~~~~---~~~----~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~------~--~~~~~~~~~~~~~~l~ 155 (242)
++ +| +|+||+++ +++ +...+.......+.+.+..++.++..+++.. . -++..++++++++++.
T Consensus 252 ~~~~G-~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 330 (401)
T 7aat_A 252 MGLYG-ERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV 330 (401)
T ss_dssp SCCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-CceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 88 99999875 554 3333332212223334445554444344211 1 1345677888888899
Q ss_pred HHHHhhcCC--CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 156 SELRSRLSP--DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 156 ~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+.| ++++. ......+..+++.|+.++ .+.+...+.++||.+.+. +|++++.. ++++++++++.|+++
T Consensus 331 ~~L-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~----~Ris~~~~-~~~~i~~~~~~l~~~ 399 (401)
T 7aat_A 331 SNL-KKEGSSHNWQHITDQIGMFCFTGLK-----PEQVERLTKEFSIYMTKD----GRISVAGV-ASSNVGYLAHAIHQV 399 (401)
T ss_dssp HHH-HHTTCCSCCHHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT----CEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred HHH-HhcCCCCCCceecCCcceEEecCCC-----HHHHHHHHHhCCEeccCC----CeEEeccC-ChhhHHHHHHHHHHH
Confidence 999 66541 122223445666665442 334444446789999765 68987654 555699999999886
Q ss_pred H
Q psy6548 234 I 234 (242)
Q Consensus 234 l 234 (242)
+
T Consensus 400 ~ 400 (401)
T 7aat_A 400 T 400 (401)
T ss_dssp H
T ss_pred h
Confidence 5
No 175
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.79 E-value=4.2e-18 Score=142.77 Aligned_cols=215 Identities=16% Similarity=0.168 Sum_probs=138.1
Q ss_pred ccccCCC-----Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccc
Q psy6548 4 QFPVKSK-----QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIH 77 (242)
Q Consensus 4 ~~~~~~~-----d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 77 (242)
+..+|.+ |+++ +...+.++++|+ ++|++|...+ +++|.++|++||+++|+||+|+.+.. +...
T Consensus 102 ~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~ 170 (374)
T 3uwc_A 102 PVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDK 170 (374)
T ss_dssp EEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTE
T ss_pred EEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCe
Confidence 3445554 6776 444455788887 5567886654 99999999999999999999973211 1112
Q ss_pred cCCCCCCEEEee----ccccC-CccchheeEeC-hhhhhccCCCC------------CCCCCCCCHHHHHHHHHHHHHHH
Q psy6548 78 YEDVRPDIVILG----KALSG-GLYPISAVLAD-DEVMGTLVPGT------------HGSTYGGNPLACKLAMTALDVIL 139 (242)
Q Consensus 78 ~~~~~~~~~~~s----K~~~~-g~~~~g~~~~~-~~~~~~l~~~~------------~~~~~~~~~~~~~~a~a~l~~~~ 139 (242)
..+..+|++++| |++++ | . +|+++++ +++++.+.... .+.++..+++..+.+...++.+
T Consensus 171 ~~~~~~d~~~~s~~~~K~l~~~g-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~- 247 (374)
T 3uwc_A 171 FVGSWGQFACFSLHPLKNLNVWS-D-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL- 247 (374)
T ss_dssp ETTSSSSEEEEECSSSSSSCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH-
T ss_pred eccccccEEEEeCCCCCcCCccc-e-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH-
Confidence 334446888876 99997 6 4 7777765 45544443211 1223334555544443333222
Q ss_pred hccHHHHHHHHHHHHHHHHHhhcCC--CCCCeEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC----------
Q psy6548 140 EENMIENAYKMGEIFRSELRSRLSP--DIVPVVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS---------- 206 (242)
Q Consensus 140 ~~~~~~~~~~~~~~l~~~l~~~l~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~---------- 206 (242)
+++.++.+++.+++++.| +.++. ....... ....++.+.+.. .+..++.++|.++||.+++..
T Consensus 248 -~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~ 323 (374)
T 3uwc_A 248 -ETITEKRRGIAHLYDQSF-VDLSEFIDVPVRREGVYHVFHIYVLRV--KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAA 323 (374)
T ss_dssp -HHHHHHHHHHHHHHHHHT-GGGTTTEECCCCCTTEECCCSSEEEEE--TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGG
T ss_pred -HHHHHHHHHHHHHHHHHh-ccCCCeEEeccCCCCCceeeEEEEEEc--CCHHHHHHHHHHCCCccccCCCCccccChhh
Confidence 346677788888888888 66542 1111111 111212222222 257889999999999987753
Q ss_pred -----------------CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 -----------------NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 -----------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.+.+|++++..+|++|++++++.|++++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 324 KSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp GGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred hhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 168999999999999999999999998875
No 176
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=1.7e-18 Score=147.41 Aligned_cols=214 Identities=16% Similarity=0.146 Sum_probs=137.1
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccc-cccCccCcccccccCCCCCCEEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKLLAIHYEDVRPDIVI 87 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~~~~~~~~~~~~~~~ 87 (242)
|+++ +.+.++++++|+++++++ |.. ..+++|+++|++||+++|+||+| .|+...+.... ... ..|+++
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~--~~~----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~--~~~-~~di~~ 230 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAY--PRK----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHAN--PVE-HAHVVT 230 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCC--CSC----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC--GGG-TCSEEE
T ss_pred CHHHHHHHHhhcCCcEEEEccccC--CCc----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccC--chh-cCcEEE
Confidence 5666 344445788888885444 322 23899999999999999999997 44433332211 111 146665
Q ss_pred --eeccccCCccchheeEeC-hhhhhccCCCCCCC-CCCCCHHHHHHHHHHHHHHH-h--ccHHHHHHHHHHHHHHHHHh
Q psy6548 88 --LGKALSGGLYPISAVLAD-DEVMGTLVPGTHGS-TYGGNPLACKLAMTALDVIL-E--ENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 88 --~sK~~~~g~~~~g~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~~a~a~l~~~~-~--~~~~~~~~~~~~~l~~~l~~ 160 (242)
+||+++ | .++||++++ +.+.+.+......+ +.+.+...++++.+++.... . +++.++++++++++++.| +
T Consensus 231 ~s~sK~l~-g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L-~ 307 (425)
T 3ecd_A 231 STTHKTLR-G-PRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVL-K 307 (425)
T ss_dssp EESSGGGC-C-CSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred ecCCcccC-C-CCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-H
Confidence 669995 4 578999988 56666554422222 22333444444444444322 2 356788888999999999 5
Q ss_pred hcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceec----cC------CCCEEEEeccCc----CCHHHHHHH
Q psy6548 161 RLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTK----PI------SNNIIRLSPALN----ITEQELREG 226 (242)
Q Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~------~~~~lR~~~~~~----~t~e~i~~~ 226 (242)
..+-... .....++++++.++....+...+.+.|.++||.+. |+ ..+.+|++++.. .++++++++
T Consensus 308 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~ 386 (425)
T 3ecd_A 308 AGGVDLV-TGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREV 386 (425)
T ss_dssp HTTCEEG-GGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHH
T ss_pred hCCCeec-cCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHH
Confidence 5442111 11235678888876532467788899999999998 43 235899995544 459999999
Q ss_pred HHHHHHHHHHH
Q psy6548 227 LDIIINTINTM 237 (242)
Q Consensus 227 ~~~l~~~l~~~ 237 (242)
++.|++++++.
T Consensus 387 ~~~l~~~l~~~ 397 (425)
T 3ecd_A 387 GRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999998875
No 177
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.78 E-value=1.6e-17 Score=139.06 Aligned_cols=210 Identities=11% Similarity=0.099 Sum_probs=134.7
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEE--E
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIV--I 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~--~ 87 (242)
|+++ +...++++++|++.++ +|.+.+ +++|.++|++||+++|+||+|+.. ..... ...+..+|+. +
T Consensus 110 d~~~l~~~i~~~~~~v~~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~~~~---~~~~~~~~i~~~s 178 (375)
T 2fnu_A 110 DELALEKLINERTKAIVSVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHALG-SEYQN---KKVGGFALASVFS 178 (375)
T ss_dssp CGGGSGGGCCTTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCTT-CEETT---EETTSSSSEEEEE
T ss_pred CHHHHHhhcCcCceEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECccccC-CeECC---eeccccCCeEEEe
Confidence 5566 4444557888776655 676655 899999999999999999999632 11111 1122223444 5
Q ss_pred ee--ccccCCccchheeEe-C-hhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Q psy6548 88 LG--KALSGGLYPISAVLA-D-DEVMGTLVPGT----------------HGSTYGGNPLACKLAMTALDVILEENMIENA 147 (242)
Q Consensus 88 ~s--K~~~~g~~~~g~~~~-~-~~~~~~l~~~~----------------~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~ 147 (242)
+| |++++| +|+++. + +++++.+.+.. .+.++..+++..+++...++.+ ++..++.
T Consensus 179 ~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~ 253 (375)
T 2fnu_A 179 FHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQKR 253 (375)
T ss_dssp CCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHH
T ss_pred CCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHHH
Confidence 77 999754 577766 3 66665554321 1122244555554444333322 3466778
Q ss_pred HHHHHHHHHHHHhhcCCCCCCeE----eeeceeEEEEecCCch-hHHHHHHHHHHCCceeccC----C------------
Q psy6548 148 YKMGEIFRSELRSRLSPDIVPVV----RGKGLLNAIVLDKSIL-EVYDVCIKMKDAGLVTKPI----S------------ 206 (242)
Q Consensus 148 ~~~~~~l~~~l~~~l~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~~~~~----~------------ 206 (242)
+++++++++.| ++++....... ...++++++.++.... +..++.+.|.++||.++.. .
T Consensus 254 ~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~ 332 (375)
T 2fnu_A 254 EEAALTYDRIF-KDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTA 332 (375)
T ss_dssp HHHHHHHHHHH-TTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCC
T ss_pred HHHHHHHHHHh-hcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCcc
Confidence 88889999999 66532111111 1233455777764322 6788999999999999721 0
Q ss_pred ---------CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 207 ---------NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 207 ---------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+.+|++++..++++|++++++.|+++++++
T Consensus 333 ~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 333 PLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp CCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1679999998899999999999999988764
No 178
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.78 E-value=4.2e-19 Score=151.24 Aligned_cols=215 Identities=13% Similarity=0.120 Sum_probs=139.5
Q ss_pred cccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 3 LQFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 3 ~~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
.+..+|.+|+++ +...++++++|++|+++|++|.+.+ +++|+++|++||+++|+||+|+.. ....+ ..++
T Consensus 147 ~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~~~-~~~~~---~~~g- 217 (414)
T 3ndn_A 147 QTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFATP-LLQQG---FPLG- 217 (414)
T ss_dssp EEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTHH-HHCCC---GGGT-
T ss_pred EEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCccc-ccCCc---hhcC-
Confidence 356678889998 5555568999999999999997765 999999999999999999999621 11111 1223
Q ss_pred CCCEEE--eeccccC-CccchheeEeChhhhh-ccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALSG-GLYPISAVLADDEVMG-TLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSE 157 (242)
Q Consensus 82 ~~~~~~--~sK~~~~-g~~~~g~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~ 157 (242)
.|+++ +||++++ |.+++|+++++++.+. .+...........++..+..+...++.+. ...++..+++.++.+.
T Consensus 218 -~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~ 294 (414)
T 3ndn_A 218 -VDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLA--IRVQHSNASAQRIAEF 294 (414)
T ss_dssp -CSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHH
T ss_pred -CCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 35555 7799995 5357899999887665 44421111112335555544444444332 2345667778888888
Q ss_pred HHhhcCCC-------CCC---------eEeeeceeEEEEecCC----chhHHHHHHHHHHCCceeccC------------
Q psy6548 158 LRSRLSPD-------IVP---------VVRGKGLLNAIVLDKS----ILEVYDVCIKMKDAGLVTKPI------------ 205 (242)
Q Consensus 158 l~~~l~~~-------~~~---------~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~~~~~------------ 205 (242)
| +..+.. ... ...+.|.++++.++.. ......|.+.|...++.++.+
T Consensus 295 L-~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~ 373 (414)
T 3ndn_A 295 L-NGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATT 373 (414)
T ss_dssp H-HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGT
T ss_pred H-hcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCcccc
Confidence 8 554321 000 1134578999999763 256778888887666655432
Q ss_pred ---------------CCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 206 ---------------SNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 206 ---------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
.++.+|+++. .|+.+.+++.|++++
T Consensus 374 ~~~~~~~~~~~~~g~~~~~iRlsvG----~e~~~dli~dl~~al 413 (414)
T 3ndn_A 374 THRAMGPEGRAAIGLGDGVVRISVG----LEDTDDLIADIDRAL 413 (414)
T ss_dssp TTCTTHHHHHHHTTCCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHhh
Confidence 2568999944 456677777776665
No 179
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.77 E-value=8.8e-19 Score=150.86 Aligned_cols=222 Identities=17% Similarity=0.104 Sum_probs=137.9
Q ss_pred Chhh--hcCCC---CCEEEEEEccccc-CCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc----------cCccCccc
Q psy6548 11 QVPA--KLKSN---PNICAFMVEPIQG-EAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG----------LGRTGKLL 74 (242)
Q Consensus 11 d~~~--~~~~~---~~~~~i~~e~~~~-~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~----------~~~~g~~~ 74 (242)
|+++ +.+.+ ..+++|++++++| ++| .+.+.+++++|+++|++||+++|+||+|+. +...|...
T Consensus 159 d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG-~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~ 237 (456)
T 2ez2_A 159 DLKKLQKLIDEKGAENIAYICLAVTVNLAGG-QPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSI 237 (456)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSBTTTTS-BCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCH
T ss_pred CHHHHHHHHHhccccceeEEEEeccCCCCCC-ccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcch
Confidence 5666 33332 2368999997666 888 577888999999999999999999999963 22333321
Q ss_pred c-c-ccCCCCCCEEEee-ccccCCccchheeEe-ChhhhhccCCCC---CC-CCC-CCCHHHHHH-HHHHHHHHHhccHH
Q psy6548 75 A-I-HYEDVRPDIVILG-KALSGGLYPISAVLA-DDEVMGTLVPGT---HG-STY-GGNPLACKL-AMTALDVILEENMI 144 (242)
Q Consensus 75 ~-~-~~~~~~~~~~~~s-K~~~~g~~~~g~~~~-~~~~~~~l~~~~---~~-~~~-~~~~~~~~~-a~a~l~~~~~~~~~ 144 (242)
. . +..+..+|++++| |.+++. -++||+++ ++++++.+.... .+ .++ +.++..+.+ +.+.++.++ +++.
T Consensus 238 ~~~~~~~~~~~d~~~~S~kk~~~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~ 315 (456)
T 2ez2_A 238 AEIVHEMFSYADGCTMSGKKDCLV-NIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYI 315 (456)
T ss_dssp HHHHHHHHTTCSEEEEETTTTTCC-SSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHH
T ss_pred hhhhhhhcccCCEEEEeCcccCCC-CceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHH
Confidence 0 0 0112336777765 444432 24788888 577776554311 11 111 223333333 344443321 3466
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecC--Cchh-----HHHHHHHH-HHCCceeccC-----------
Q psy6548 145 ENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDK--SILE-----VYDVCIKM-KDAGLVTKPI----------- 205 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~l-~~~gi~~~~~----------- 205 (242)
++.+++.+++++.| ++.+ +....+..++++++.+.. ...+ .+.+.+.| .++||.+.+.
T Consensus 316 ~~~~~~~~~l~~~L-~~~g--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~ 392 (456)
T 2ez2_A 316 EHRVKQVRYLGDKL-KAAG--VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVT 392 (456)
T ss_dssp HHHHHHHHHHHHHH-HHTT--CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTT
T ss_pred HHHHHHHHHHHHHH-hcCC--CccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccc
Confidence 77777888888888 5543 211123447788887631 1012 33447777 5789976431
Q ss_pred ------CCCEEEEeccCc-CCHHHHHHHHHHHHHHHHHHh
Q psy6548 206 ------SNNIIRLSPALN-ITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 206 ------~~~~lR~~~~~~-~t~e~i~~~~~~l~~~l~~~~ 238 (242)
+.+.+|++++.. .+++++++++++|++++++..
T Consensus 393 g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 393 GEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred cccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 137899998876 899999999999999988754
No 180
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.77 E-value=2.9e-18 Score=148.03 Aligned_cols=221 Identities=14% Similarity=0.095 Sum_probs=138.1
Q ss_pred Chhh--hcCCC---CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc----------cCccCccc-
Q psy6548 11 QVPA--KLKSN---PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG----------LGRTGKLL- 74 (242)
Q Consensus 11 d~~~--~~~~~---~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~----------~~~~g~~~- 74 (242)
|+++ +.+.+ +++++|++++++|++|+.+++.+++++|+++|++||++||+|++|.. .+..|...
T Consensus 168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~ 247 (467)
T 2oqx_A 168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE 247 (467)
T ss_dssp CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH
T ss_pred CHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH
Confidence 6666 34432 47999999999999866888889999999999999999999976632 12222211
Q ss_pred ccc--cCCCCCCEE--EeeccccCCccchheeEeChh----hhhccCCCC---C-CCCCCCC-HHHHHHHHHHHHHHHhc
Q psy6548 75 AIH--YEDVRPDIV--ILGKALSGGLYPISAVLADDE----VMGTLVPGT---H-GSTYGGN-PLACKLAMTALDVILEE 141 (242)
Q Consensus 75 ~~~--~~~~~~~~~--~~sK~~~~g~~~~g~~~~~~~----~~~~l~~~~---~-~~~~~~~-~~~~~~a~a~l~~~~~~ 141 (242)
.+. .+ ..+|++ +++|+++.+ . .|+++++++ .+..+.+.. . ..+++.. ..++++....++....+
T Consensus 248 ~~~~~~~-~~~d~~~~s~sK~~g~~-~-Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~ 324 (467)
T 2oqx_A 248 QITRETY-KYADMLAMSAKKDAMVP-M-GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL 324 (467)
T ss_dssp HHHHHHG-GGCSEEEEESSSTTCCS-S-CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCH
T ss_pred HHhhhhh-ccCCeEEEecccccCCC-C-ceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhH
Confidence 110 00 113443 477999733 1 256667655 333332210 1 1112222 22222211222221112
Q ss_pred cHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecC-----Cc-h-hHHHHHHHH-HHCCceeccCC-------
Q psy6548 142 NMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDK-----SI-L-EVYDVCIKM-KDAGLVTKPIS------- 206 (242)
Q Consensus 142 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~l-~~~gi~~~~~~------- 206 (242)
+..++.+++++++++.| ++++ +... +..++++++.+.. +. . +...+.+.| .++||.+.+++
T Consensus 325 ~~~~~~~~~~~~l~~~L-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~ 400 (467)
T 2oqx_A 325 DWLAYRIAQVQYLVDGL-EEIG--VVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRD 400 (467)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTT--CCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBC
T ss_pred HHHHHHHHHHHHHHHHH-HHCC--Ceee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccccccccccc
Confidence 34566678889999999 6553 2222 4557788888742 10 1 156678888 88999998732
Q ss_pred ----------CCEEEEeccCc-CCHHHHHHHHHHHHHHHHHHh
Q psy6548 207 ----------NNIIRLSPALN-ITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 207 ----------~~~lR~~~~~~-~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.+++|++++.. ++++++++++++|++++++..
T Consensus 401 ~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 401 PKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp TTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred ccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 27999999988 999999999999999988754
No 181
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=1.2e-18 Score=149.45 Aligned_cols=216 Identities=15% Similarity=0.106 Sum_probs=141.5
Q ss_pred ccccCCCChhh-hcCCCCCE-EEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNI-CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~-~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
+..+|.+|+++ +...++++ ++|++|+++|++|.+.+ +++|+++|++||+++|+|++|+... .. .....
T Consensus 181 v~~v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~~-~~-----~~~~~ 250 (445)
T 1qgn_A 181 ATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATPL-NQ-----KALAL 250 (445)
T ss_dssp EEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCTT-TC-----CTTTT
T ss_pred EEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccc-cC-----Ccccc
Confidence 45678888888 44333456 99999999999997775 8999999999999999999996321 11 11234
Q ss_pred CCCEEE--eeccccCC-ccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALSGG-LYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 82 ~~~~~~--~sK~~~~g-~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l 158 (242)
.+|+++ ++|.++++ -.++|++++++++++.+...........+++.+..+...++.+. ...++..++++++.+.|
T Consensus 251 g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L 328 (445)
T 1qgn_A 251 GADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEIL 328 (445)
T ss_dssp TCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHH
Confidence 578877 67999953 13689999999888777542111112235555444444554332 22345566678888888
Q ss_pred HhhcCCC--C--C---C---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-----------------
Q psy6548 159 RSRLSPD--I--V---P---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------------- 205 (242)
Q Consensus 159 ~~~l~~~--~--~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------------- 205 (242)
+..+.. + + . ...+.+.+++|.++....+...+.+.|...++.++.+
T Consensus 329 -~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~ 407 (445)
T 1qgn_A 329 -EAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDL 407 (445)
T ss_dssp -HTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTS
T ss_pred -hcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccC
Confidence 554321 0 0 0 0123678899999764234666777665334433211
Q ss_pred ----------CCCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 206 ----------SNNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 206 ----------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.++.+|+++. .||++++++.|++++++
T Consensus 408 ~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 408 SQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp CHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 2478999944 56899999999998865
No 182
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.77 E-value=1.5e-18 Score=147.58 Aligned_cols=215 Identities=16% Similarity=0.111 Sum_probs=138.4
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+.++++++|+++++++ |...+ +++|+++|++||+++|+||+|. ++...+.... ... .+|++
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~--~~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~-~~di~ 226 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAY--SGVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN--PVP-HAHVV 226 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTC--CSCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC--STT-TSSEE
T ss_pred cCHHHHHHHHHhcCCeEEEEecCcc--CCccC----HHHHHHHHHHcCCEEEEECCcchhceecccCCc--ccc-cCCEE
Confidence 56666 444444688888876443 33333 9999999999999999999984 4433332111 111 26787
Q ss_pred E--eeccccCCccchheeEeCh---hhhhccCCCCCCCCCCCC-HHHHHHHHHHHHHHH-h--ccHHHHHHHHHHHHHHH
Q psy6548 87 I--LGKALSGGLYPISAVLADD---EVMGTLVPGTHGSTYGGN-PLACKLAMTALDVIL-E--ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 87 ~--~sK~~~~g~~~~g~~~~~~---~~~~~l~~~~~~~~~~~~-~~~~~~a~a~l~~~~-~--~~~~~~~~~~~~~l~~~ 157 (242)
+ +||+++| .+.|++++++ ++++.+......++.+.+ ...++++..++.... . +++.++++++++++++.
T Consensus 227 ~~s~sK~~~g--~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (420)
T 3gbx_A 227 TTTTHKTLAG--PRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEV 304 (420)
T ss_dssp EEESSGGGCS--CSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccCCCC--CCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 7 6699974 4468898887 677666543333333333 333333333443321 1 34678888889999999
Q ss_pred HHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc-------C---CCCEEEEeccCc----CCHHHH
Q psy6548 158 LRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP-------I---SNNIIRLSPALN----ITEQEL 223 (242)
Q Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-------~---~~~~lR~~~~~~----~t~e~i 223 (242)
| +..+-... .....++++++.++....+...+.+.|.++||.+.+ + +++.+|++++.. .+++++
T Consensus 305 L-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i 382 (420)
T 3gbx_A 305 F-LNRGYKVV-SGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEV 382 (420)
T ss_dssp H-HHTTCEEG-GGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHH
T ss_pred H-HhcCCeec-cCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHH
Confidence 9 55432111 111356778888765324577888899999999987 2 345699997654 458999
Q ss_pred HHHHHHHHHHHHHH
Q psy6548 224 REGLDIIINTINTM 237 (242)
Q Consensus 224 ~~~~~~l~~~l~~~ 237 (242)
+++++.|++++++.
T Consensus 383 ~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 383 KELAGWMCDVLDNI 396 (420)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999988653
No 183
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.76 E-value=3e-18 Score=145.86 Aligned_cols=208 Identities=13% Similarity=0.075 Sum_probs=132.4
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCc---cccccc-CCCCCCEE---Eeecc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGK---LLAIHY-EDVRPDIV---ILGKA 91 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~-~~~~~~~~---~~sK~ 91 (242)
++++.++++.+++||+| ..++++.+++|+++|++|++++|+||+|.+|...+. .+.... .+....++ +|||.
T Consensus 188 ~~~~~vll~~~p~NPtG-~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 266 (420)
T 4h51_A 188 PDGSVFILHQCAHNPTG-VDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKN 266 (420)
T ss_dssp CSSCEEEEESSSCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTT
T ss_pred CCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccc
Confidence 56788888899999999 677889999999999999999999999998854332 111111 11122333 38999
Q ss_pred cc-CCccchheeEeChhhhhccCCC------CCCCCC-CCCHHHHHHHHHHHHH------HHh--ccHHHHHHHHHHHHH
Q psy6548 92 LS-GGLYPISAVLADDEVMGTLVPG------THGSTY-GGNPLACKLAMTALDV------ILE--ENMIENAYKMGEIFR 155 (242)
Q Consensus 92 ~~-~g~~~~g~~~~~~~~~~~l~~~------~~~~~~-~~~~~~~~~a~a~l~~------~~~--~~~~~~~~~~~~~l~ 155 (242)
|+ .| +|+||+.+.....+..... ....++ +.+..++.++...+.. ++. +.+.++++++++.+.
T Consensus 267 ~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~ 345 (420)
T 4h51_A 267 MGLYS-ERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVY 345 (420)
T ss_dssp SCCGG-GCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-CceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 88 9999988754333222110 111222 2334444444333331 111 235667778888888
Q ss_pred HHHHhhcCCC--CCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 156 SELRSRLSPD--IVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 156 ~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
+.| +.++.. +....+..|+|.++-+. .+.++.|.++||++.+.+ ||++.. .+++.|+++.++|.++
T Consensus 346 ~~L-~~~g~~~~~~~i~~q~GmF~~~gls------~e~v~~L~e~~Vy~~~~g----Ris~Ag-l~~~ni~~~a~aI~~v 413 (420)
T 4h51_A 346 DEL-LRLQTPGSWEHVINQIGMFSFLGLS------KAQCEYCQNHNIFITVSG----RANMAG-LTHETALMLAQTINDA 413 (420)
T ss_dssp HHH-HHTTCSSCCTHHHHCCSSEEECCCC------HHHHHHHHHTTEECCTTC----EEEGGG-CCHHHHHHHHHHHHHH
T ss_pred HHH-HHhCCCCCCCeecCCCceEEecCcC------HHHHHHHHhCCEEEcCCC----EEEecc-CCHHHHHHHHHHHHHH
Confidence 888 665532 21123445777665432 234578889999988864 888543 4889999999999999
Q ss_pred HHHHhhh
Q psy6548 234 INTMAAK 240 (242)
Q Consensus 234 l~~~~~~ 240 (242)
++++.++
T Consensus 414 vr~i~re 420 (420)
T 4h51_A 414 VRNVNRE 420 (420)
T ss_dssp HC-----
T ss_pred HHHhhcC
Confidence 9887653
No 184
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.76 E-value=3.6e-17 Score=138.01 Aligned_cols=207 Identities=13% Similarity=0.197 Sum_probs=135.4
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-cCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...+.++++|+++ +++|...+ +++|+++|++||+++|+||+|+. ....+. ..+..+|+.++
T Consensus 133 d~~~l~~~~~~~~~~v~~~---n~tG~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~ 200 (391)
T 3dr4_A 133 DAAKLEALITPRTKAIMPV---HLYGQICD----MDPILEVARRHNLLVIEDAAEAVGATYRGK-----KSGSLGDCATF 200 (391)
T ss_dssp CGGGSGGGCCTTEEEECCB---CGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTE-----ETTSSSSEEEE
T ss_pred CHHHHHHhcCCCceEEEEE---CCCCChhh----HHHHHHHHHHcCCEEEEECcccccceECCe-----eecccCCEEEE
Confidence 5666 44445688888843 46776554 99999999999999999999962 211111 12333577776
Q ss_pred e----ccccCCccchheeEeC-hhhhhccCCC--------------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Q psy6548 89 G----KALSGGLYPISAVLAD-DEVMGTLVPG--------------THGSTYGGNPLACKLAMTALDVILEENMIENAYK 149 (242)
Q Consensus 89 s----K~~~~g~~~~g~~~~~-~~~~~~l~~~--------------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~ 149 (242)
| |++++| +.|+++.+ +++++.+... ..+.++..+++..+++...++.+ +++.++.++
T Consensus 201 S~s~~K~l~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~--~~~~~~~~~ 276 (391)
T 3dr4_A 201 SFFGNAIITTG--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERV--DEHLAARER 276 (391)
T ss_dssp ECBTTSSSCCB--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTH--HHHHHHHHH
T ss_pred ECCCCCcCCcC--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 6 999875 36777665 4455444321 11222444555554444333322 346778888
Q ss_pred HHHHHHHHHHhhcCCCCCCe-----EeeeceeEEEEecCC-chhHHHHHHHHHHCCceeccCC-----------------
Q psy6548 150 MGEIFRSELRSRLSPDIVPV-----VRGKGLLNAIVLDKS-ILEVYDVCIKMKDAGLVTKPIS----------------- 206 (242)
Q Consensus 150 ~~~~l~~~l~~~l~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~~~----------------- 206 (242)
+.+++++.| +.++-..... ......++++.++.. +.+.+++.++|.++||.+++..
T Consensus 277 ~~~~l~~~L-~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~ 355 (391)
T 3dr4_A 277 VVGWYEQKL-ARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDL 355 (391)
T ss_dssp HHHHHHHHH-GGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTC
T ss_pred HHHHHHHHh-hcCCccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCC
Confidence 899999999 6653211111 122334567777651 1568899999999999998652
Q ss_pred -------CCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 207 -------NNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 207 -------~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
...+|++++..+|+||++++++.|++++
T Consensus 356 ~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 356 KIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 3579999999999999999999997653
No 185
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.76 E-value=8.6e-19 Score=147.48 Aligned_cols=219 Identities=15% Similarity=0.155 Sum_probs=136.3
Q ss_pred CChhh-hcCCCCCEEE-EEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCc--cCcccccccCCCCCCE
Q psy6548 10 KQVPA-KLKSNPNICA-FMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGR--TGKLLAIHYEDVRPDI 85 (242)
Q Consensus 10 ~d~~~-~~~~~~~~~~-i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~--~g~~~~~~~~~~~~~~ 85 (242)
+|+++ +.. ++++++ |++++++|++|. +...+++|.++|++||+++|+||+|..+.. ....... ...+|+
T Consensus 129 ~d~~~l~~~-~~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~---~~~~di 201 (374)
T 2aeu_A 129 DKVGEILNK-IDKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL---KLGADL 201 (374)
T ss_dssp SCHHHHHTT-CCTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH---HHTCSE
T ss_pred CCHHHHHhc-CCCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc---ccCCcE
Confidence 57777 545 678899 999999999984 446799999999999999999999864421 1110011 123566
Q ss_pred EE--eeccccCCccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH----HHHHH
Q psy6548 86 VI--LGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIF----RSELR 159 (242)
Q Consensus 86 ~~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l----~~~l~ 159 (242)
++ +||+++ | +++||+++++++++.+.........+.+++.+.++.++++.+..+ ..+...++++.+ ++.|+
T Consensus 202 ~~~S~sK~l~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 278 (374)
T 2aeu_A 202 VVTSTDKLME-G-PRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNFDLSKIEKLN 278 (374)
T ss_dssp EEEETTSSSS-S-CSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHCCCHHHHHHH
T ss_pred EEecCccccc-C-cceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 65 789976 4 789999999998887765322233356788888888888764221 223333334344 45553
Q ss_pred hhcCC-----CCCCeEeeeceeEEE-EecCCch---hHHHHHHHH-HHCCceeccC-----CCCEEEEeccC-cCCHHHH
Q psy6548 160 SRLSP-----DIVPVVRGKGLLNAI-VLDKSIL---EVYDVCIKM-KDAGLVTKPI-----SNNIIRLSPAL-NITEQEL 223 (242)
Q Consensus 160 ~~l~~-----~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l-~~~gi~~~~~-----~~~~lR~~~~~-~~t~e~i 223 (242)
+.++. ++.....+.|++++. ..... . +..+++..+ .++||.+.|+ +.+++|++++. ..+++++
T Consensus 279 ~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l 357 (374)
T 2aeu_A 279 KELKAIDDNINIVYERTPTGFVIKRVYKDDT-INIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDD 357 (374)
T ss_dssp HHHTTTCTTEEEEEEECSSEEEEEEEESSHH-HHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCH
T ss_pred HhhhhhhhccCcceeeCCceEEEEeeccccc-ccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHH
Confidence 33332 111122334444333 33211 1 112355444 4689999875 24589999653 2233348
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6548 224 REGLDIIINTINTMAA 239 (242)
Q Consensus 224 ~~~~~~l~~~l~~~~~ 239 (242)
+++.+.|+++++++.+
T Consensus 358 ~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 358 NYIIKAIVESIKMAFK 373 (374)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999998888754
No 186
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.76 E-value=2e-17 Score=138.70 Aligned_cols=208 Identities=13% Similarity=0.102 Sum_probs=132.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG 89 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s 89 (242)
|+++ +...+.++++|+ +++++|...+ +++|.++|++||+++|+||+|+.. .. +.....+...|++++|
T Consensus 113 d~~~l~~~l~~~~~~v~---~~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~~g-~~---~~~~~~~~~~d~~~~S 181 (373)
T 3frk_A 113 DPSLIESAITEKTKAII---AVHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQAHG-SL---YKGMKVGSLGDAAGFS 181 (373)
T ss_dssp CGGGTGGGCCTTEEEEE---EECCTTCCCC----HHHHHHHHHHHTCEEEEECTTCTT-CE---ETTEETTSSSSEEEEE
T ss_pred CHHHHHHhcCCCCeEEE---EECCCcCccc----HHHHHHHHHHcCCEEEEECCcccC-CE---ECCEeccccccEEEEe
Confidence 6776 444455888888 4567886554 999999999999999999999621 11 1112334446888877
Q ss_pred ----ccccC-CccchheeEeC-hhhhhccCCC------------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Q psy6548 90 ----KALSG-GLYPISAVLAD-DEVMGTLVPG------------THGSTYGGNPLACKLAMTALDVILEENMIENAYKMG 151 (242)
Q Consensus 90 ----K~~~~-g~~~~g~~~~~-~~~~~~l~~~------------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~ 151 (242)
|++++ | . .|+++++ +++++.+.+. ..+.++..+++..+.+...++.+ +++.++.+++.
T Consensus 182 ~~~~K~l~~~g-~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~ 257 (373)
T 3frk_A 182 FYPAKNLGSLG-D-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYL--DKWNEERRKIA 257 (373)
T ss_dssp CCTTSSSCCSS-S-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHH
T ss_pred CcCCCccCccc-e-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 99987 6 3 6777765 4455444321 12334445666655554444322 34567777778
Q ss_pred HHHHHHHHhhcCCCCCCeEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC------------------------
Q psy6548 152 EIFRSELRSRLSPDIVPVVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS------------------------ 206 (242)
Q Consensus 152 ~~l~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~------------------------ 206 (242)
+++++.| +.++-....... ....++.+.+.. .+.+++.+.|.++||.+++..
T Consensus 258 ~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (373)
T 3frk_A 258 QKYIAGI-NNPNVIIPVEADYAKHVWYTFVIRS--EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAE 334 (373)
T ss_dssp HHHHHHC-CCTTEECCCCCTTEECCCSSEEEEE--SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHH
T ss_pred HHHHHHh-ccCceEeccCCCCCceeeEEEEEEe--CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHH
Confidence 8887777 554311111111 111222222222 247889999999999997432
Q ss_pred ---CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 ---NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 ---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
.+.+|++++..+|++|++++++.|+++..+
T Consensus 335 ~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 335 KIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred HHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 168999999999999999999999876554
No 187
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.76 E-value=1.5e-17 Score=140.34 Aligned_cols=208 Identities=16% Similarity=0.179 Sum_probs=139.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-cCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...+.++++|++++ ++|...+ +++|.++|++||+++|+||+|+. +...+.. ++. .|++++
T Consensus 116 d~~~l~~~l~~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d~~~~ 182 (393)
T 1mdo_A 116 TPEHIEAAITPQTKAIIPVH---YAGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RGTAIF 182 (393)
T ss_dssp CHHHHHHHCCTTEEEECCBC---GGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SSEEEE
T ss_pred CHHHHHHhcCCCceEEEEeC---CCCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CCeEEE
Confidence 5666 333345789988876 4665543 99999999999999999999973 3222221 222 688775
Q ss_pred e----ccccCCccchheeEeC-hhhhhccCCCCC------------------------CCCCCCCHHHHHHHHHHHHHHH
Q psy6548 89 G----KALSGGLYPISAVLAD-DEVMGTLVPGTH------------------------GSTYGGNPLACKLAMTALDVIL 139 (242)
Q Consensus 89 s----K~~~~g~~~~g~~~~~-~~~~~~l~~~~~------------------------~~~~~~~~~~~~~a~a~l~~~~ 139 (242)
| |++++| ++|+++.+ +++++.+.+... +.++..+++..+.+.+.++.+
T Consensus 183 S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~- 259 (393)
T 1mdo_A 183 SFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKL- 259 (393)
T ss_dssp ECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTH-
T ss_pred eCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHH-
Confidence 5 888765 58898886 677665542111 111234566655555555433
Q ss_pred hccHHHHHHHHHHHHHHHHHhhcCCCCC--C--eEeeeceeEEEEecC---CchhHHHHHHHHHHCCceeccCC------
Q psy6548 140 EENMIENAYKMGEIFRSELRSRLSPDIV--P--VVRGKGLLNAIVLDK---SILEVYDVCIKMKDAGLVTKPIS------ 206 (242)
Q Consensus 140 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~--~--~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gi~~~~~~------ 206 (242)
++..++.+++++++++.| +.++-... . .....++++++.++. . .+..++.+.|.++||.++++.
T Consensus 260 -~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~~~~~ 336 (393)
T 1mdo_A 260 -DALNARRAAIAAQYHQAM-ADLPFQPLSLPSWEHIHAWHLFIIRVDEARCG-ITRDALMASLKTKGIGTGLHFRAAHTQ 336 (393)
T ss_dssp -HHHHHHHHHHHHHHHHHH-HTSSCEECCCCSSCEECCCSCEEEECCHHHHS-SCHHHHHHHHHHTTBCCBCCCCCGGGS
T ss_pred -HHHHHHHHHHHHHHHHHH-hcCCcccccCCCCCCCceeEEEEEEecccccc-cCHHHHHHHHHhCCCCcccccCccccC
Confidence 345667777888888888 66541111 1 123445678888873 2 367889999999999997642
Q ss_pred -------------------CCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 207 -------------------NNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 207 -------------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
...+|++++...|++|++++++.|+++++..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 337 KYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp HHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred hhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 2379999888899999999999999887653
No 188
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.76 E-value=1.9e-17 Score=140.99 Aligned_cols=210 Identities=14% Similarity=0.103 Sum_probs=137.7
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+ +++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|++++....+ ....
T Consensus 123 ~~~~~~~-~~~l~~~i~~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-----~~~~ 192 (412)
T 2cb1_A 123 VRYVDPE-PEAVREALSAKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCRP-----LAWG 192 (412)
T ss_dssp EEEECSS-HHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCCG-----GGGT
T ss_pred EEEECCC-HHHHHHHhccCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCCc-----cccC
Confidence 3445554 666 4444568999999999999998775 999999999999999999999754211111 1234
Q ss_pred CCEEE--eecccc-CCccchheeEeCh-h---------------------------hhhccCCCC-CCCCCCCCHHHHHH
Q psy6548 83 PDIVI--LGKALS-GGLYPISAVLADD-E---------------------------VMGTLVPGT-HGSTYGGNPLACKL 130 (242)
Q Consensus 83 ~~~~~--~sK~~~-~g~~~~g~~~~~~-~---------------------------~~~~l~~~~-~~~~~~~~~~~~~~ 130 (242)
+|+++ ++|+++ +| .++|+++..+ + +.+.++... .......++...+.
T Consensus 193 ~di~~~S~~K~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~ 271 (412)
T 2cb1_A 193 AHVVVESLTKWASGHG-SVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYL 271 (412)
T ss_dssp CSEEEEETTTTTTCSS-CCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHH
T ss_pred CeEEEECCcccccCCC-CcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHH
Confidence 67777 779998 45 7788877543 2 222222211 11122345655555
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCCC-C--CeE-------------eeeceeEEEEecCCchhHHHHHHH
Q psy6548 131 AMTALDVILEENMIENAYKMGEIFRSELRSRLSPDI-V--PVV-------------RGKGLLNAIVLDKSILEVYDVCIK 194 (242)
Q Consensus 131 a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~-~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (242)
++..++.+ +...++..++.+++.+.| ++.+... . ... .+.+.++.+.+ . +.+.+.+.
T Consensus 272 ~~~~l~~l--~~~~~~~~~~~~~l~~~L-~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~---~~~~~~~~ 344 (412)
T 2cb1_A 272 LFQGLETV--ALRVARMSETARFLAERL-QGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G---DLERASRF 344 (412)
T ss_dssp HHHHGGGH--HHHHHHHHHHHHHHHHHH-HTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S---SHHHHHHH
T ss_pred HHcCCchH--HHHHHHHHHHHHHHHHHH-HcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C---CHHHHHHH
Confidence 55444433 223455667888888888 5543211 1 000 24567888888 4 35667777
Q ss_pred HHHCCceeccC------------------------------CCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 195 MKDAGLVTKPI------------------------------SNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 195 l~~~gi~~~~~------------------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
|.+.||.+ .+ ..+.+|++++..+++++++.+.+.|++
T Consensus 345 l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 345 LGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred HHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 77889886 32 057899999999999999999988864
No 189
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.76 E-value=3.2e-18 Score=145.38 Aligned_cols=214 Identities=16% Similarity=0.165 Sum_probs=139.1
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhC-CEEEEeccccccCccCcccccccCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN-VLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~-~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++|| +++|+||+|.++.. ..+. +.
T Consensus 133 v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~~livD~~~~~~~~-~~~~-----~~ 202 (403)
T 3cog_A 133 ISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVID----IEGCAHIVHKHGDIILVVDNTFMSPYF-QRPL-----AL 202 (403)
T ss_dssp EEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHTSSSCCEEEEECTTTCTTT-CCTT-----TT
T ss_pred EEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeC----HHHHHHHHHHcCCCEEEEECCCccccc-CCcc-----cc
Confidence 55678888888 5544568999999999999998775 999999999999 99999999975421 1111 23
Q ss_pred CCCEEE--eeccccC-CccchheeEeC-hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALSG-GLYPISAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSE 157 (242)
Q Consensus 82 ~~~~~~--~sK~~~~-g~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~ 157 (242)
..|+++ ++|++++ |-.++|+++++ +++++.+.+....+....+++.+.++..+++.+.. ..+...++...+.+.
T Consensus 203 ~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~n~~~l~~~ 280 (403)
T 3cog_A 203 GADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHV--RMEKHFKNGMAVAQF 280 (403)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHH
T ss_pred CCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHH
Confidence 567775 7899994 21468999985 77777776533333445677777666666654321 234445555566666
Q ss_pred HHhhcC-------CCCCC---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc---C-------------
Q psy6548 158 LRSRLS-------PDIVP---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP---I------------- 205 (242)
Q Consensus 158 l~~~l~-------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~---~------------- 205 (242)
+ +..+ ..... ...+.|.++.+.++.. .+...+.+.+.|+.+.. +
T Consensus 281 l-~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~ 356 (403)
T 3cog_A 281 L-ESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGT---LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMT 356 (403)
T ss_dssp H-HTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC---HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTT
T ss_pred H-hcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCC---HHHHHHHHHhCCcceEccCCCCcceeeecccccc
Confidence 6 3321 11100 0113467777887653 24555666677774321 1
Q ss_pred --------------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 --------------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 --------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
.++.+|++++...++++++.+.+.|+++
T Consensus 357 ~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 357 HASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAA 398 (403)
T ss_dssp TTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 1578999988877766666666666543
No 190
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.76 E-value=4.2e-18 Score=144.22 Aligned_cols=215 Identities=12% Similarity=0.055 Sum_probs=140.9
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh----CCEEEEeccccccCccCccccccc
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY----NVLFIADEVQTGLGRTGKLLAIHY 78 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~----~~~li~De~~~~~~~~g~~~~~~~ 78 (242)
+..+|.+| ++ +...++++++|++++++|++|.+.+ +++|+++|++| |+++|+||+|+++.. ....
T Consensus 121 v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~~~~-~~~~---- 190 (393)
T 1n8p_A 121 TSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSPYI-SNPL---- 190 (393)
T ss_dssp CEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHHHH-CCGG----
T ss_pred EEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCcccccc-CCHH----
Confidence 45667777 66 4444568999999999999998775 99999999999 999999999975432 1211
Q ss_pred CCCCCCEEE--eecccc-CCccch-heeEeC-hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q psy6548 79 EDVRPDIVI--LGKALS-GGLYPI-SAVLAD-DEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI 153 (242)
Q Consensus 79 ~~~~~~~~~--~sK~~~-~g~~~~-g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~ 153 (242)
....|+++ ++|.++ +| +|+ |+++++ +++++.+...........++..+.++..+++.+. ...+...++...
T Consensus 191 -~~~~di~~~S~sK~~g~~G-~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~ 266 (393)
T 1n8p_A 191 -NFGADIVVHSATKYINGHS-DVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLH--LRVRQAALSANK 266 (393)
T ss_dssp -GGTCSEEEEETTTTTTCSS-CCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHH
T ss_pred -HcCCeEEEEECcccccCCC-CceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHH--HHHHHHHHHHHH
Confidence 12357765 779999 57 788 888884 7787777643221122345666555555554332 233445566677
Q ss_pred HHHHHHhhcCC--------CCCCe---------Eee-e-ceeEEEEecCCchhHHHHHHHHHHCCceeccC---------
Q psy6548 154 FRSELRSRLSP--------DIVPV---------VRG-K-GLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------- 205 (242)
Q Consensus 154 l~~~l~~~l~~--------~~~~~---------~~~-~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------- 205 (242)
+.+.| +..+. ..... ..+ . +.+++|.++....+.+.+.+.|...++.++.+
T Consensus 267 l~~~L-~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p 345 (393)
T 1n8p_A 267 IAEFL-AADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVP 345 (393)
T ss_dssp HHHHH-TSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECT
T ss_pred HHHHH-HhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeecc
Confidence 77777 44321 00000 012 4 67899999753245666777665444333110
Q ss_pred ------------------CCCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 206 ------------------SNNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 206 ------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
..+.+|+++....++++++.+.+.|+++
T Consensus 346 ~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 346 AVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp TTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1478999999999999999998888764
No 191
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.76 E-value=4.5e-17 Score=136.01 Aligned_cols=200 Identities=11% Similarity=0.033 Sum_probs=141.1
Q ss_pred CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--eeccccCC
Q psy6548 18 SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGG 95 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~sK~~~~g 95 (242)
.++++++|++.+++|++|....+ ++++ ||+++++||+|+.+ .. ...+.. . |+++ ++|+++ .
T Consensus 139 i~~~t~~v~~~~~~n~tG~~~~~---l~~i------~~~~vivD~a~~~~-~~--~~~~~~--~--d~~~~s~~K~~g-~ 201 (362)
T 2c0r_A 139 LQDNAAYLHLTSNETIEGAQFKA---FPDT------GSVPLIGDMSSDIL-SR--PFDLNQ--F--GLVYAGAQKNLG-P 201 (362)
T ss_dssp CCTTEEEEEEESEETTTTEECSS---CCCC------TTSCEEEECTTTTT-SS--CCCGGG--C--SEEEEETTTTTC-C
T ss_pred cCCCcCEEEEeCCcCccceeccc---cccc------CCCEEEEEChhhcc-CC--ccchhH--C--cEEEEecccccc-C
Confidence 46689999999999999976432 4444 89999999999632 11 111111 2 6655 679997 2
Q ss_pred ccchheeEeChhhhhccCCCC------------CCCCCCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHH
Q psy6548 96 LYPISAVLADDEVMGTLVPGT------------HGSTYGGNPLACKLAMTALDVILE----ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 96 ~~~~g~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~a~a~l~~~~~----~~~~~~~~~~~~~l~~~l~ 159 (242)
.++||+++++++++.+.+.. ....++.+..++.++.++++.+.+ +...++.+++++++++.|
T Consensus 202 -~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L- 279 (362)
T 2c0r_A 202 -SGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAI- 279 (362)
T ss_dssp -SSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-
T ss_pred -cCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-
Confidence 34799999998887776421 012345677788888888887654 346788888889999999
Q ss_pred hhcC-C-CCCCeE-eeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 160 SRLS-P-DIVPVV-RGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 160 ~~l~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
++++ - ...... ...+.++++.++.. .+..++.+.|.++||.+.++. .+.+|++++..+++|+++++++.|++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 358 (362)
T 2c0r_A 280 DQSGGFYRGCVDVDSRSDMNITFRLASE-ELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFK 358 (362)
T ss_dssp HTSTTSSEESSCGGGBCSSEEEEECSCH-HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred HHcCCccccCCChHHcCCcEEEEEcCCc-chHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 6664 1 111111 12345677777653 567889999999999887652 4579999888889999999999999887
Q ss_pred HHH
Q psy6548 235 NTM 237 (242)
Q Consensus 235 ~~~ 237 (242)
++.
T Consensus 359 ~~~ 361 (362)
T 2c0r_A 359 RSR 361 (362)
T ss_dssp HHH
T ss_pred Hhc
Confidence 653
No 192
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.75 E-value=3.4e-17 Score=142.60 Aligned_cols=227 Identities=9% Similarity=0.019 Sum_probs=145.0
Q ss_pred cccccCCC-----Chhh--hcCCCC-----CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCcc
Q psy6548 3 LQFPVKSK-----QVPA--KLKSNP-----NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 70 (242)
Q Consensus 3 ~~~~~~~~-----d~~~--~~~~~~-----~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~ 70 (242)
.++.+|.+ |+++ +.+.++ .+.+|+++.+++++|.+.+ +++|+++|++||+++++|++|.++...
T Consensus 228 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~ 303 (497)
T 2qma_A 228 AVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALIL 303 (497)
T ss_dssp GEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence 45667776 6666 333321 2557888888888897655 999999999999999999999865433
Q ss_pred CcccccccCCC-CCCEEEe--eccccCCccchheeEeCh-hhhhccCCCC--C--CCCCCCCHHH----------HHHHH
Q psy6548 71 GKLLAIHYEDV-RPDIVIL--GKALSGGLYPISAVLADD-EVMGTLVPGT--H--GSTYGGNPLA----------CKLAM 132 (242)
Q Consensus 71 g~~~~~~~~~~-~~~~~~~--sK~~~~g~~~~g~~~~~~-~~~~~l~~~~--~--~~~~~~~~~~----------~~~a~ 132 (242)
.. +.....++ .+|++++ +|+++++ +++|+++.++ ..++.+.... . ..+...++.. ....+
T Consensus 304 ~~-~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~ 381 (497)
T 2qma_A 304 SS-HKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVF 381 (497)
T ss_dssp ST-TGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHH
T ss_pred Cc-chHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHH
Confidence 32 22122344 6788775 7999988 7999988764 3444443210 0 0000011111 11223
Q ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCc----hhHHHHHHHHHHCCceecc-
Q psy6548 133 TALDVILE---ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSI----LEVYDVCIKMKDAGLVTKP- 204 (242)
Q Consensus 133 a~l~~~~~---~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~~~~- 204 (242)
++++.+.. +++.++..++++++++.| ++++. +....+..+.++++.+.... ....++.+.|.++|+.+.+
T Consensus 382 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L-~~~~~-~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~ 459 (497)
T 2qma_A 382 MTMQNVGPKALGDMYDHLLAQTLEVADMI-RTNDQ-FELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGE 459 (497)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHHHH-HTCTT-EEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEE
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHH-hhCCC-eEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEe
Confidence 44554322 245677888899999999 66532 11101233457777775531 1235678889999998864
Q ss_pred ---CCCCEEEEec-cCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 205 ---ISNNIIRLSP-ALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 205 ---~~~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+.+++|+++ +..+|+++++++++.|+++++++
T Consensus 460 ~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 460 TIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp EEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 2456899997 88899999999999999988764
No 193
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.75 E-value=5.1e-18 Score=145.95 Aligned_cols=215 Identities=14% Similarity=0.109 Sum_probs=136.9
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccc-cccCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+.+.++++++++.+.++++. ++++|+++|++||+++|+||+| .|+...|.... ... ..|++
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~--~~~-~~di~ 242 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVL------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS--PVP-HADVV 242 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCC------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--STT-TCSEE
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCcc------CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC--CCC-CCcEE
Confidence 45666 3343445677777544444432 3999999999999999999997 54433332111 111 23666
Q ss_pred E--eeccccCCccchheeEeChhhhhccCCCCCCCCCCCC-HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHh
Q psy6548 87 I--LGKALSGGLYPISAVLADDEVMGTLVPGTHGSTYGGN-PLACKLAMTALDVILE---ENMIENAYKMGEIFRSELRS 160 (242)
Q Consensus 87 ~--~sK~~~~g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~~ 160 (242)
+ +||+++ | ++.|++++++++++.+.+....++++.+ ...++++.+++..... +++.+++.++++++++.| +
T Consensus 243 ~~s~sK~l~-G-~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L-~ 319 (447)
T 3h7f_A 243 STTVHKTLG-G-GRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRL-M 319 (447)
T ss_dssp EEESSGGGC-C-CSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred EecCCcCCC-C-CCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-H
Confidence 5 789996 5 6789999998887776543333333333 3334444445554322 346777888889999988 5
Q ss_pred hc-----CCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceec----cC------CCCEEEEeccCc----CCHH
Q psy6548 161 RL-----SPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTK----PI------SNNIIRLSPALN----ITEQ 221 (242)
Q Consensus 161 ~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~------~~~~lR~~~~~~----~t~e 221 (242)
+. +-.... ....++++++++...+.+...+.+.|.++||.+. +. .++.+|++++.. .+++
T Consensus 320 ~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~e 398 (447)
T 3h7f_A 320 APDVAKAGVSVVS-GGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDT 398 (447)
T ss_dssp SHHHHHTTCEEGG-GSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHH
T ss_pred hccccCCCeEEec-CCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHH
Confidence 54 311111 1124567778776543356677777878899988 33 356799986554 6799
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6548 222 ELREGLDIIINTINTM 237 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~ 237 (242)
+++++++.|++++++.
T Consensus 399 ei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 399 EFTEVADIIATALATG 414 (447)
T ss_dssp HHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999988754
No 194
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.75 E-value=1.9e-17 Score=140.68 Aligned_cols=215 Identities=13% Similarity=0.127 Sum_probs=139.9
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccc-cccCccCcccccccCCCCCCEE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKLLAIHYEDVRPDIV 86 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~~~~~~~~~~~~~~ 86 (242)
.|+++ +.+.++++++|++.++++ |...+ +++|+++|++||+++|+||+| .|+...+.... ... ..|++
T Consensus 151 ~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~ 221 (417)
T 3n0l_A 151 IDYEKVREIAKKEKPKLIVCGASAY--ARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHPS--PFP-YAHVV 221 (417)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--CTT-TCSEE
T ss_pred cCHHHHHHHHHhcCCeEEEECCccc--CccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCCC--ccc-cceEE
Confidence 35666 334435788888766553 65554 999999999999999999997 33322221110 011 34777
Q ss_pred Eee--ccccCCccchheeEeC-hhhhhccCCCCC-CCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Q psy6548 87 ILG--KALSGGLYPISAVLAD-DEVMGTLVPGTH-GSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 87 ~~s--K~~~~g~~~~g~~~~~-~~~~~~l~~~~~-~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~ 159 (242)
++| |+|+ | .++||++++ +++++.+.+... +.+.+.++..++++.+++..... +++.++++++++++.+.|
T Consensus 222 ~~s~sK~l~-g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L- 298 (417)
T 3n0l_A 222 SSTTHKTLR-G-PRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVL- 298 (417)
T ss_dssp EEESSTTTC-S-CSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EeeCccccC-C-CCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 755 9994 4 568999988 678777654322 22223445555555555554322 356677888888999999
Q ss_pred hhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC----------CCCEEEEeccC----cCCHHHHHH
Q psy6548 160 SRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------SNNIIRLSPAL----NITEQELRE 225 (242)
Q Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------~~~~lR~~~~~----~~t~e~i~~ 225 (242)
+..+-.... ....+.++++.+...+.+...+.+.|.++||.+.+. ..+.+|++++. ..+++++++
T Consensus 299 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~ 377 (417)
T 3n0l_A 299 MDRKFKLVS-DGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEI 377 (417)
T ss_dssp HHTTCEEGG-GSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHH
T ss_pred HhCCceecc-CCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHH
Confidence 554311111 113356778887654346788889999999998742 23679998653 257899999
Q ss_pred HHHHHHHHHHHH
Q psy6548 226 GLDIIINTINTM 237 (242)
Q Consensus 226 ~~~~l~~~l~~~ 237 (242)
++++|++++++.
T Consensus 378 ~~~~l~~~l~~~ 389 (417)
T 3n0l_A 378 VSNYIADILDDV 389 (417)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc
Confidence 999999998753
No 195
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.75 E-value=2.8e-17 Score=138.54 Aligned_cols=211 Identities=15% Similarity=0.128 Sum_probs=136.3
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-cCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...++++++|+ ++|++|.+.+ +++|.++|++||+++|+||+|+. ....+.. ...++ ..++.+|
T Consensus 115 d~~~l~~~i~~~~~~v~---~~n~tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~~S~ 184 (388)
T 1b9h_A 115 DPEAVAAAVTPRTKVIM---PVHMAGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIATFSF 184 (388)
T ss_dssp CHHHHHHHCCTTEEEEC---CBCGGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEEEEC
T ss_pred CHHHHHHhcCcCceEEE---EeCCccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEEEEc
Confidence 5566 443355788877 5566786654 89999999999999999999963 3222221 22222 2334446
Q ss_pred e--ccccCCccchheeEeChh-h--hhccCC---C------------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Q psy6548 89 G--KALSGGLYPISAVLADDE-V--MGTLVP---G------------THGSTYGGNPLACKLAMTALDVILEENMIENAY 148 (242)
Q Consensus 89 s--K~~~~g~~~~g~~~~~~~-~--~~~l~~---~------------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~ 148 (242)
| |+++|| ++|+++++++ + ++.+.. . ..+.++..+++.++++.+.++.++ +..++.+
T Consensus 185 s~~K~l~g~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~~~~ 260 (388)
T 1b9h_A 185 QNGKLMTAG--EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIAVRD 260 (388)
T ss_dssp CTTSSSCSS--SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHHHHH
T ss_pred cCCCcccCC--CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHHHHH
Confidence 6 666654 6899988765 5 444421 0 001222345555554444444332 3567778
Q ss_pred HHHHHHHHHHHhhcCCCCCCe-----EeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccCCC---------------
Q psy6548 149 KMGEIFRSELRSRLSPDIVPV-----VRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPISN--------------- 207 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~~~--------------- 207 (242)
++++++.+.| +.++...... .+..++++++.++... .+.+++.++|.++||.++++..
T Consensus 261 ~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~ 339 (388)
T 1b9h_A 261 ERWTLLSRLL-GAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPD 339 (388)
T ss_dssp HHHHHHHHHH-HTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCS
T ss_pred HHHHHHHHHh-ccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCc
Confidence 8889999999 6663211111 1234678889887531 2578899999999999975311
Q ss_pred ------------------CEEEEeccCcC-CHHHHHHHHHHHHHHHHH
Q psy6548 208 ------------------NIIRLSPALNI-TEQELREGLDIIINTINT 236 (242)
Q Consensus 208 ------------------~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 236 (242)
+.+|++++..+ |++|++++++.|++++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 340 ESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp SCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 25999998899 999999999999988764
No 196
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.75 E-value=1.8e-17 Score=140.13 Aligned_cols=211 Identities=14% Similarity=0.140 Sum_probs=137.2
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
+..+|.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+||+|.++. .+.+. +..
T Consensus 126 ~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~livD~~~~~~~-~~~~~-----~~~ 195 (389)
T 3acz_A 126 VDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSD----IKGIAVVCHERGARLVVDATFTSPC-FLKPL-----ELG 195 (389)
T ss_dssp EEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCTT-TCCGG-----GTT
T ss_pred EEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcccc-ccCcc-----ccC
Confidence 45678888888 5555668999999999999998775 9999999999999999999997532 11221 235
Q ss_pred CCEEE--eeccccCCccch-heeEeCh-hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q psy6548 83 PDIVI--LGKALSGGLYPI-SAVLADD-EVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 83 ~~~~~--~sK~~~~g~~~~-g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l 158 (242)
+|+++ ++|+++++..|+ |++++++ ++++.+.+.........++..+.++.+.++.+. ...+...++...+.+.|
T Consensus 196 ~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~--~r~~~~~~~~~~l~~~l 273 (389)
T 3acz_A 196 ADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTLP--IRMQIHMENGLKVAKFL 273 (389)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHH
T ss_pred CeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHHH--HHHHHHHHHHHHHHHHH
Confidence 67775 789999432777 9999998 888777653221223456666666565555332 22345556667777777
Q ss_pred HhhcCC-------CCCC---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-----------------
Q psy6548 159 RSRLSP-------DIVP---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----------------- 205 (242)
Q Consensus 159 ~~~l~~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----------------- 205 (242)
+..+. .... ...+.+.++.+.+.. .++..+.+.+.|+.+...
T Consensus 274 -~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~----~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~ 348 (389)
T 3acz_A 274 -EQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS----FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTH 348 (389)
T ss_dssp -HHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS----HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTT
T ss_pred -HcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC----HHHHHHHHHhCCCcEECcCCCCcccEeeCCccccc
Confidence 44321 1100 012346788888754 344556666677766441
Q ss_pred -------------CCCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 206 -------------SNNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 206 -------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
.++.+|++++.. +.+++++.|.++++
T Consensus 349 ~~~~~~~~~~~g~~~~~iRlsvg~~----~~~~li~~l~~al~ 387 (389)
T 3acz_A 349 AAVPENIMRKQGITPELVRISVGIE----NVDDIIADLKQALE 387 (389)
T ss_dssp SSSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHT
T ss_pred ccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 147999997665 44555555555543
No 197
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.75 E-value=9.8e-18 Score=141.95 Aligned_cols=201 Identities=9% Similarity=0.072 Sum_probs=139.3
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--eeccccCCc
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--LGKALSGGL 96 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~sK~~~~g~ 96 (242)
++++++|++++++|++|.+.+. +++.++ ||+++|+||+|+.+.. ..... ..|+++ ++|+++++
T Consensus 163 ~~~~~~v~~~~~~nptG~~~~~----~~i~~~---~~~~vivD~a~~~~~~---~~~~~----~~di~~~s~sK~~~~~- 227 (398)
T 2fyf_A 163 DPSVDVIAWAHNETSTGVAVAV----RRPEGS---DDALVVIDATSGAGGL---PVDIA----ETDAYYFAPQKNFASD- 227 (398)
T ss_dssp CTTCSEEEEESEETTTTEECCC----CCCTTC---C-CEEEEECTTTTTTS---CCCGG----GCSEEEECTTSTTCSC-
T ss_pred cCCCCEEEEeCcCCCcceecch----HHhhhh---cCCeEEEEeccccCCc---ccCcc----cCcEEEEecCcccCCC-
Confidence 5678999999999999977763 333343 8999999999974321 11111 257776 55999954
Q ss_pred cchheeEeChhhhhccCC----------CC----------CCCC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHH
Q psy6548 97 YPISAVLADDEVMGTLVP----------GT----------HGST-YGGNPLACKLAMTALDVILE----ENMIENAYKMG 151 (242)
Q Consensus 97 ~~~g~~~~~~~~~~~l~~----------~~----------~~~~-~~~~~~~~~~a~a~l~~~~~----~~~~~~~~~~~ 151 (242)
-++|++++++++++.+.+ .. .+.+ .+.+..++.++.++++.+.+ +++.++.++++
T Consensus 228 gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 228 GGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp SSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 358999999888776521 00 0122 23456666677777776543 24567888889
Q ss_pred HHHHHHHHhhcCC-CCCC-eEe-eeceeEEEEecCCchhHHHHHHHHHHCCceeccC----CCCEEEEeccCcCCHHHHH
Q psy6548 152 EIFRSELRSRLSP-DIVP-VVR-GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI----SNNIIRLSPALNITEQELR 224 (242)
Q Consensus 152 ~~l~~~l~~~l~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~----~~~~lR~~~~~~~t~e~i~ 224 (242)
+++.+.| +.++. .... .+. ..+.++++.++.. .+..++.+.|.++||.++++ +.+.+|++++..++++|++
T Consensus 308 ~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~ 385 (398)
T 2fyf_A 308 QRLYSWA-QERPYTTPFVTDPGLRSQVVGTIDFVDD-VDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVS 385 (398)
T ss_dssp HHHHHHH-HHSTTEEESCCSGGGBCSSEEEEEECTT-SCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHH
T ss_pred HHHHHHH-HHcCCceeccCChhhcCCcEEEEECCCC-CCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHH
Confidence 9999999 66632 1111 111 1334888888653 56789999999999999864 2578999998888999999
Q ss_pred HHHHHHHHHHHH
Q psy6548 225 EGLDIIINTINT 236 (242)
Q Consensus 225 ~~~~~l~~~l~~ 236 (242)
+++++|++++++
T Consensus 386 ~~~~~l~~~l~~ 397 (398)
T 2fyf_A 386 ALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 198
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.74 E-value=2.2e-17 Score=142.37 Aligned_cols=210 Identities=12% Similarity=0.093 Sum_probs=138.0
Q ss_pred Chhh--hcC-C---CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccccccc-CCCCC
Q psy6548 11 QVPA--KLK-S---NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHY-EDVRP 83 (242)
Q Consensus 11 d~~~--~~~-~---~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~ 83 (242)
|+++ +.+ . +.++.+|++..+++++|.+.+ +++|.++|++||+++++||+|.++.....+..... .+ .+
T Consensus 215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~ 289 (456)
T 2z67_A 215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RV 289 (456)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CC
T ss_pred CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CC
Confidence 5666 444 2 247888888888888997765 99999999999999999999975422111111111 12 56
Q ss_pred CEEEe--eccccCCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Q psy6548 84 DIVIL--GKALSGGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 84 ~~~~~--sK~~~~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~ 157 (242)
|++++ +|+++++ +++|++++ ++++++.+.+...+... .++ ..++.+++..+.. +++.++.+++++++++.
T Consensus 290 D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~~~~g~~~-~~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISLSYPGRAS-ATP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHTTSCSCBC-SHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCcCCCCCCC-CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77775 5988888 89999998 57777777554333321 111 2233444443332 34678888999999999
Q ss_pred HHhhcC---CCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCc---eec------------cCCCCEEEEeccCcCC
Q psy6548 158 LRSRLS---PDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGL---VTK------------PISNNIIRLSPALNIT 219 (242)
Q Consensus 158 l~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi---~~~------------~~~~~~lR~~~~~~~t 219 (242)
| ++++ ......++ .++++.+..+ ....++.+.|.++|+ -+. ....+++|++++..+|
T Consensus 366 L-~~~~~~~g~~v~~~~---~~v~~~~~~~-~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t 440 (456)
T 2z67_A 366 L-NDLSKKTGGKFLDVE---SPIASCISVN-SDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVR 440 (456)
T ss_dssp H-HHHHHHSSCCBCCCC---CSSEEEEECS-SCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCC
T ss_pred H-HhcccccCCEecCCC---CeEEEEEecc-cHHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCC
Confidence 9 6662 11122222 4556666322 124678999999985 232 2235789999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy6548 220 EQELREGLDIIINTI 234 (242)
Q Consensus 220 ~e~i~~~~~~l~~~l 234 (242)
++++++++++|++++
T Consensus 441 ~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 441 TEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 199
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.74 E-value=1.2e-16 Score=136.45 Aligned_cols=210 Identities=15% Similarity=0.189 Sum_probs=133.4
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIVI- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~- 87 (242)
|+++ +...+.++++|++.+ ++|... .+++|+++|++||+++|+||+|+ |+...+.. .+..+|+++
T Consensus 127 d~~~l~~~i~~~~~~v~~~~---~tG~~~----~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~ 194 (424)
T 2po3_A 127 DPDQVAAAVTPRTSAVVGVH---LWGRPC----AADQLRKVADEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVF 194 (424)
T ss_dssp CHHHHGGGCCTTEEEEEEEC---GGGCCC----CHHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEE
T ss_pred CHHHHHHhhCcCCcEEEEEC---CCCCcC----CHHHHHHHHHHcCCEEEEECccccCCeECCee-----cccccCEEEE
Confidence 5565 444445788888754 466543 39999999999999999999997 55433322 122246666
Q ss_pred -ee--ccccCCccchheeEeC-hhhhhccCCCCC------------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Q psy6548 88 -LG--KALSGGLYPISAVLAD-DEVMGTLVPGTH------------GSTYGGNPLACKLAMTALDVILEENMIENAYKMG 151 (242)
Q Consensus 88 -~s--K~~~~g~~~~g~~~~~-~~~~~~l~~~~~------------~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~ 151 (242)
|| |++++ .++||++++ +++++.+.+... +.++..+++..++++..++.+ +++.++.++++
T Consensus 195 S~sk~K~l~~--~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~--~~~~~~~~~~~ 270 (424)
T 2po3_A 195 SFHATKAVNA--FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAF--PEVIDRNRRNH 270 (424)
T ss_dssp ECCTTSSSCC--SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred eCCCCCCccC--CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 44 66655 589999998 777766543111 112233455555444433332 23566677777
Q ss_pred HHHHHHHHhhcCC-CCCCeEee-e--ceeEEEEecCC--chhHHHHHHHHHHCCceeccCCC------------------
Q psy6548 152 EIFRSELRSRLSP-DIVPVVRG-K--GLLNAIVLDKS--ILEVYDVCIKMKDAGLVTKPISN------------------ 207 (242)
Q Consensus 152 ~~l~~~l~~~l~~-~~~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~~~~------------------ 207 (242)
+++++.| +.++. .....+.+ . ..++++.++.. +.+..++.+.|.++||.+.+...
T Consensus 271 ~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~ 349 (424)
T 2po3_A 271 AAYREHL-ADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLP 349 (424)
T ss_dssp HHHHHHT-CSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCH
T ss_pred HHHHHHh-ccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCCh
Confidence 7777777 55431 11111111 1 24555776530 13578899999999999976311
Q ss_pred -------CEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 208 -------NIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 208 -------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
..+|+.++...+++|++++++.|+++++..
T Consensus 350 ~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 350 HTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 128888788999999999999999988764
No 200
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.74 E-value=9.9e-18 Score=142.16 Aligned_cols=216 Identities=15% Similarity=0.109 Sum_probs=138.4
Q ss_pred cccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 3 LQFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 3 ~~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
.+..+|++|+++ +...++++++|++|+++|++|.+.+ +++|+++|++||+++|+||+|... ....+. .+
T Consensus 133 ~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~----l~~i~~la~~~g~~livDe~~~~~-~~~~~~---~~-- 202 (400)
T 3nmy_A 133 DFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVD----IAAIAVIARKHGLLTVVDNTFASP-MLQRPL---SL-- 202 (400)
T ss_dssp EEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTHH-HHCCGG---GG--
T ss_pred EEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-ccCChh---hc--
Confidence 355688899998 5555668999999999999997775 999999999999999999999521 111111 12
Q ss_pred CCCEEE--eeccccCCccchhe--eE-eChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALSGGLYPISA--VL-ADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRS 156 (242)
Q Consensus 82 ~~~~~~--~sK~~~~g~~~~g~--~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~ 156 (242)
..|+++ ++|+++|+..++|. ++ .++++++.+.......+...+++.+..++..++.+. ...++..+++..+.+
T Consensus 203 g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l~--~r~~~~~~~a~~l~~ 280 (400)
T 3nmy_A 203 GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTLP--LRMRAHCENALALAQ 280 (400)
T ss_dssp TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHH
T ss_pred CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHH
Confidence 345555 88999953255554 33 467777776653333444567776666555555432 235666777888888
Q ss_pred HHHhhcCCC-------CCC---------eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC---------------
Q psy6548 157 ELRSRLSPD-------IVP---------VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI--------------- 205 (242)
Q Consensus 157 ~l~~~l~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~--------------- 205 (242)
.| +..+.. ... ...+.|.+++|++.........+.+.|.--++.++.+
T Consensus 281 ~L-~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~ 359 (400)
T 3nmy_A 281 WL-ETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHA 359 (400)
T ss_dssp HH-TTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTT
T ss_pred HH-HcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccc
Confidence 88 554321 000 0145688999999764234566666665433332211
Q ss_pred ------------CCCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 206 ------------SNNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 206 ------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
.++.+|++.... +.+.+++.|+++++
T Consensus 360 ~~~~~~~~~~gi~~~liRlsvGle----~~~dli~dl~~al~ 397 (400)
T 3nmy_A 360 SIPVARREQLGISDALVRLSVGIE----DLGDLRGDLERALV 397 (400)
T ss_dssp TSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHC
T ss_pred cCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence 357899995554 44555566666654
No 201
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.73 E-value=6.9e-18 Score=142.76 Aligned_cols=199 Identities=14% Similarity=0.070 Sum_probs=131.9
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhC--CEEEEeccccccCccCcccccccCCCCCCEEEeecccc-CC
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYN--VLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GG 95 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~--~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~-~g 95 (242)
.+++++++++.++|++|.+.. +|++ ++|+ +++|+||+|.+ . ...... ...+....+.+|||.++ +|
T Consensus 155 ~~~~k~v~l~~p~NPtG~~~~------~l~~--~~~~~~~~ii~De~y~~-~-~~~~l~-~~~~~~i~~~S~SK~~g~~G 223 (391)
T 3bwn_A 155 KKGPYIELVTSPNNPDGTIRE------TVVN--RPDDDEAKVIHDFAYYW-P-HYTPIT-RRQDHDIMLFTFSKITGHAG 223 (391)
T ss_dssp CCSCEEEEEESSCTTTCCCCC------CCC-------CCCEEEEECTTCS-T-TTSCCC-CCBCCSEEEEEHHHHHSCGG
T ss_pred CCCCEEEEECCCCCCCchhHH------HHHH--HhhcCCCEEEEeCCCCC-C-CCCccc-cCCCCeEEEEechhhcCCCc
Confidence 457888888889999997774 2333 2355 99999999963 1 111111 11111112333889998 88
Q ss_pred ccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH---------h---ccHHHHHHHHHHHHHHHHHhhc
Q psy6548 96 LYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVIL---------E---ENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 96 ~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~---------~---~~~~~~~~~~~~~l~~~l~~~l 162 (242)
+|+||+++ ++++++.+.......+++.+.+++.++.++++... . +...+.++++++.+.+.| +.+
T Consensus 224 -lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~ 301 (391)
T 3bwn_A 224 -SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVV-KES 301 (391)
T ss_dssp -GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHH-HTC
T ss_pred -cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHH-HhC
Confidence 99999997 88888877654333345678888888888887542 1 335677788888888888 555
Q ss_pred CC-CCC--Ce---------EeeeceeEEEEecCCchhHHHHHHHHHHCCceeccC-----CCCEEEEeccCcCCHHHHHH
Q psy6548 163 SP-DIV--PV---------VRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPI-----SNNIIRLSPALNITEQELRE 225 (242)
Q Consensus 163 ~~-~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~-----~~~~lR~~~~~~~t~e~i~~ 225 (242)
+. .+. .. .+..|+++|+.++.. +.+.+.|.++||.+.|+ +.+++|+++. .+++++++
T Consensus 302 ~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~ 375 (391)
T 3bwn_A 302 DAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNV 375 (391)
T ss_dssp SSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHH
T ss_pred CCcccccCCccccccccccCCCcceEEEecCCcH----HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHH
Confidence 31 011 00 123456788988753 24566778899999875 2679999955 58999999
Q ss_pred HHHHHHHHHHH
Q psy6548 226 GLDIIINTINT 236 (242)
Q Consensus 226 ~~~~l~~~l~~ 236 (242)
++++|++++++
T Consensus 376 ~~~~L~~~~~~ 386 (391)
T 3bwn_A 376 FLERLANMKLI 386 (391)
T ss_dssp HHHHHHSCC--
T ss_pred HHHHHHHHHHh
Confidence 99999887654
No 202
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.73 E-value=3.1e-16 Score=136.75 Aligned_cols=223 Identities=13% Similarity=0.037 Sum_probs=145.0
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh------CCEEEEeccccccCc--cCcccccccCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY------NVLFIADEVQTGLGR--TGKLLAIHYEDV 81 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~ 81 (242)
|+++ +...+.++++|+++.+.+++|.+.+ +++|.++|++| |+++++|++|.++.. ............
T Consensus 191 d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~ 266 (502)
T 3hbx_A 191 DPQQAVDMVDENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP 266 (502)
T ss_dssp CHHHHHHHCCTTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTST
T ss_pred CHHHHHHHHhhCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCC
Confidence 5666 4445567899999998999997766 99999999999 999999999976421 011111111111
Q ss_pred CCCEEEe--eccccCCccchheeEeC-hhhh-hccC--CCCCCC-------CCCCCHHHHHHHHHHHHHHHh---ccHHH
Q psy6548 82 RPDIVIL--GKALSGGLYPISAVLAD-DEVM-GTLV--PGTHGS-------TYGGNPLACKLAMTALDVILE---ENMIE 145 (242)
Q Consensus 82 ~~~~~~~--sK~~~~g~~~~g~~~~~-~~~~-~~l~--~~~~~~-------~~~~~~~~~~~a~a~l~~~~~---~~~~~ 145 (242)
..|.+++ .|.++++ .++|+++.. ++.+ +.+. +...+. .++.+.....+.+++++.+.. ++..+
T Consensus 267 ~~D~v~~s~hK~l~~p-~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~ 345 (502)
T 3hbx_A 267 LVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVME 345 (502)
T ss_dssp TEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECcccccCCC-CCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455553 4888777 788987765 4433 2111 011111 122222234444555554433 34567
Q ss_pred HHHHHHHHHHHHHHhhcCC-CCCCeEeeeceeEEEEecCCc-hhHHHHHHHHHHCCceeccC-------CCCEEEEeccC
Q psy6548 146 NAYKMGEIFRSELRSRLSP-DIVPVVRGKGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPI-------SNNIIRLSPAL 216 (242)
Q Consensus 146 ~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~-------~~~~lR~~~~~ 216 (242)
+..++++++++.| +.++. .+.. ......++.|.++... .+..++.++|.++|+++... +...+|++++.
T Consensus 346 ~~~~~a~~l~~~L-~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~ 423 (502)
T 3hbx_A 346 NCRENMIVLREGL-EKTERFNIVS-KDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIRE 423 (502)
T ss_dssp HHHHHHHHHHHHH-HTTTCEEECS-CSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHH-HhCCCEEEEe-CCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCC
Confidence 7778888999999 66652 1111 1124567778776531 35668999999999987421 34689999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 217 NITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 217 ~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
.+|.|+++++++.|+++++.+.+.
T Consensus 424 ~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 424 DFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999887654
No 203
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.72 E-value=4.7e-16 Score=133.83 Aligned_cols=223 Identities=10% Similarity=0.044 Sum_probs=142.6
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhh------CCEEEEeccccccCc--cCcccccccCCC
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQY------NVLFIADEVQTGLGR--TGKLLAIHYEDV 81 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~ 81 (242)
|+++ +...+.++++|+++.+.+++|.+.+ +++|.++|++| |+++++|++|.++.. .........--.
T Consensus 176 d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 251 (452)
T 2dgk_A 176 DPKRMIEACDENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLP 251 (452)
T ss_dssp CHHHHHHHCCTTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTST
T ss_pred CHHHHHHHHhhCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCC
Confidence 5666 4444567899999999999998765 99999999996 999999999976522 111111110011
Q ss_pred CCCEEEee--ccccCCccchheeEeCh-hhh-hccC--CCCCCC-------CCCCCHHHHHHHHHHHHHHHh---ccHHH
Q psy6548 82 RPDIVILG--KALSGGLYPISAVLADD-EVM-GTLV--PGTHGS-------TYGGNPLACKLAMTALDVILE---ENMIE 145 (242)
Q Consensus 82 ~~~~~~~s--K~~~~g~~~~g~~~~~~-~~~-~~l~--~~~~~~-------~~~~~~~~~~~a~a~l~~~~~---~~~~~ 145 (242)
..|.++++ |.+.+| +++|+++.++ +.+ +.+. +...++ .++.+.....+.+++++.+.. ++..+
T Consensus 252 ~~d~~~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~ 330 (452)
T 2dgk_A 252 RVKSISASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQN 330 (452)
T ss_dssp TEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34656644 977688 8999999864 333 3332 111110 111122223333444544332 34567
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEe----eeceeEEEEecCCc---hhHHHHHHHHHHCCceec----cC---CCCEEE
Q psy6548 146 NAYKMGEIFRSELRSRLSPDIVPVVR----GKGLLNAIVLDKSI---LEVYDVCIKMKDAGLVTK----PI---SNNIIR 211 (242)
Q Consensus 146 ~~~~~~~~l~~~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~~~----~~---~~~~lR 211 (242)
+..++++++.+.| ++++. +....+ ....++.+.++... .+..++.+.|.++|+.++ |. +.+.+|
T Consensus 331 ~~~~~a~~l~~~L-~~~~~-~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lR 408 (452)
T 2dgk_A 331 ASYQVAAYLADEI-AKLGP-YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMR 408 (452)
T ss_dssp HHHHHHHHHHHHH-HTTSS-EEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEE
T ss_pred HHHHHHHHHHHHH-HhCCC-eEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEE
Confidence 7778888898989 66542 111112 24466777776421 245789999999999654 22 345899
Q ss_pred EeccCcCCHHHHHHHHHHHHHHHHHHhhh
Q psy6548 212 LSPALNITEQELREGLDIIINTINTMAAK 240 (242)
Q Consensus 212 ~~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 240 (242)
+++...+|+++++++++.|+++++.+.+.
T Consensus 409 is~~~~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 409 IMCRRGFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99988889999999999999998876543
No 204
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.72 E-value=8.6e-17 Score=134.72 Aligned_cols=202 Identities=16% Similarity=0.174 Sum_probs=135.8
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...++++++|+++ +++|...+ +++|.++|++||+++|+||+|+ |....+. ..+...|++++
T Consensus 112 d~~~l~~~i~~~~~~v~~~---~~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~ 179 (367)
T 3nyt_A 112 DPQLLEAAITPRTKAIIPV---SLYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACT 179 (367)
T ss_dssp CGGGTGGGCCTTEEEECCB---CGGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEE
T ss_pred CHHHHHHhcCcCCcEEEee---CCccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCe-----eccCCCCEEEE
Confidence 6666 55556789888843 45664444 9999999999999999999996 2222222 11222388886
Q ss_pred e----ccccC-CccchheeEe-ChhhhhccCCC------------CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Q psy6548 89 G----KALSG-GLYPISAVLA-DDEVMGTLVPG------------THGSTYGGNPLACKLAMTALDVILEENMIENAYKM 150 (242)
Q Consensus 89 s----K~~~~-g~~~~g~~~~-~~~~~~~l~~~------------~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~ 150 (242)
| |.+++ | . .|+++. ++++++.+... ..+.++..+++.++++.+.++.+ +++.++.+++
T Consensus 180 Sf~~~K~l~~~g-~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~ 255 (367)
T 3nyt_A 180 SFFPSAPLGCYG-D-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIF--EEEIALRQKV 255 (367)
T ss_dssp ECCTTSSSCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHH
T ss_pred ECCCCCcCCCcC-c-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 6 99997 7 4 777777 46666555431 11346677888877777766644 3456778888
Q ss_pred HHHHHHHHHhhcCCCCCCeE---eeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC---------------------
Q psy6548 151 GEIFRSELRSRLSPDIVPVV---RGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--------------------- 206 (242)
Q Consensus 151 ~~~l~~~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--------------------- 206 (242)
.+++++.| +.++....... ......+.+..+ +.+.+.++|.++||.+++..
T Consensus 256 ~~~~~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (367)
T 3nyt_A 256 AAEYDLSL-KQVGIGTPFIEVNNISVYAQYTVRMD----NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGD 330 (367)
T ss_dssp HHHHHHHH-HHTTCCCCCCCTTEECCCSSEEEECS----SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHH
T ss_pred HHHHHHHh-ccCCeeccCCCCCCceeeEEEEEEeC----CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHH
Confidence 89999999 66642111111 112223344433 46789999999999886432
Q ss_pred ---CCEEEEeccCcCCHHHHHHHHHHHHHH
Q psy6548 207 ---NNIIRLSPALNITEQELREGLDIIINT 233 (242)
Q Consensus 207 ---~~~lR~~~~~~~t~e~i~~~~~~l~~~ 233 (242)
...+|+.++...|++|++++++.|+++
T Consensus 331 ~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 331 KAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 247999999999999999999998764
No 205
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.72 E-value=2.4e-17 Score=141.73 Aligned_cols=202 Identities=11% Similarity=0.010 Sum_probs=132.9
Q ss_pred CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc-cCccCcccccccCCCCCCEEEee--ccccC
Q psy6548 18 SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG-LGRTGKLLAIHYEDVRPDIVILG--KALSG 94 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~s--K~~~~ 94 (242)
.+++++++++++ .+++|.+.+ +++|+++|++||+++|+||+|++ +...+.+.... ...+|+++.| |++++
T Consensus 143 ~~~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~--~~g~Di~~~S~~K~l~~ 215 (446)
T 2x3l_A 143 NNDGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL--NYQADYVVQSFHKTLPA 215 (446)
T ss_dssp ----CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG--GGTCSEEEECHHHHSSS
T ss_pred cCCCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH--HcCCCEEEECCcccccc
Confidence 456788899888 566887765 89999999999999999999975 22222211111 2236787755 98887
Q ss_pred CccchheeEeChhhhh--ccCCC-CCCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy6548 95 GLYPISAVLADDEVMG--TLVPG-THGSTYGGNPLACKLAMTALDVILEEN---MIENAYKMGEIFRSELRSRLSPDIVP 168 (242)
Q Consensus 95 g~~~~g~~~~~~~~~~--~l~~~-~~~~~~~~~~~~~~~a~a~l~~~~~~~---~~~~~~~~~~~l~~~l~~~l~~~~~~ 168 (242)
+ .++|++.+++++++ .+... ....+.+.+...+++..++++.+.... +.++.+++++++++. + +..
T Consensus 216 ~-~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g--~~~ 287 (446)
T 2x3l_A 216 L-TMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----G--FEM 287 (446)
T ss_dssp C-TTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----T--CEE
T ss_pred c-cccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----C--CEE
Confidence 7 67899988876644 22111 111233455555555556677665532 455555555555543 1 111
Q ss_pred eEeeeceeEEEEecCCchhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 169 VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
........+++.++. .+..++.+.|.++||.+...+.+++|++++..+|++++ +++++|+++++.+
T Consensus 288 ~~~~~~~~l~i~~~~--~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 288 LQVDDPLKLLIKYEG--FTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp EECSSTTEEEEECTT--SCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred CcCCCCeEEEEEeCC--cCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 111123457777763 46788999999999999845578999999988899999 9999999887654
No 206
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.72 E-value=2.4e-16 Score=137.48 Aligned_cols=229 Identities=12% Similarity=0.050 Sum_probs=141.4
Q ss_pred cccccCCC-----Chhh--hcCCC-----CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCcc
Q psy6548 3 LQFPVKSK-----QVPA--KLKSN-----PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRT 70 (242)
Q Consensus 3 ~~~~~~~~-----d~~~--~~~~~-----~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~ 70 (242)
.++.+|.+ |+++ +.+.+ .++++|+++.+.+++|.+.+ +++|+++|++||+++++|++|.++...
T Consensus 215 ~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 215 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLM 290 (504)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred cEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEehhhhhHHHh
Confidence 45566765 5666 33332 26899999999999997765 999999999999999999999765322
Q ss_pred CcccccccCCC-CCCEEEee--ccccCCccchheeEeCh-hhhhc----cCCCCCCC-C----------C------CCCH
Q psy6548 71 GKLLAIHYEDV-RPDIVILG--KALSGGLYPISAVLADD-EVMGT----LVPGTHGS-T----------Y------GGNP 125 (242)
Q Consensus 71 g~~~~~~~~~~-~~~~~~~s--K~~~~g~~~~g~~~~~~-~~~~~----l~~~~~~~-~----------~------~~~~ 125 (242)
...+.....++ .+|+++++ |+++++ +++|+++.++ ++++. ..+...+. . + ....
T Consensus 291 ~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~ 369 (504)
T 2okj_A 291 SRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDI 369 (504)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCH
T ss_pred CHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccH
Confidence 21111122233 56888854 999988 7899999875 45442 11111110 0 0 1134
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCeEeeeceeEEEEecCCc---------------hhHH
Q psy6548 126 LACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSP-DIVPVVRGKGLLNAIVLDKSI---------------LEVY 189 (242)
Q Consensus 126 ~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 189 (242)
+.+.++++++..-.-+++.++..++++++.+.| ++++. .+....+....++.|...... ....
T Consensus 370 l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (504)
T 2okj_A 370 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKI-KNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAP 448 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHH
Confidence 444444444431111345677888888899988 65532 111110122333444432210 1246
Q ss_pred HHHHHHHHCCcee-cc--C-C-CCEEEEecc-CcCCHHHHHHHHHHHHHHHHHH
Q psy6548 190 DVCIKMKDAGLVT-KP--I-S-NNIIRLSPA-LNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 190 ~~~~~l~~~gi~~-~~--~-~-~~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+.+.|.++|+++ .+ . + .+++|+++. ...|++|++++++.|+++++++
T Consensus 449 ~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 449 KIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7889999999643 32 1 2 258999984 7889999999999999887654
No 207
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.71 E-value=6.6e-17 Score=137.67 Aligned_cols=216 Identities=14% Similarity=0.027 Sum_probs=138.9
Q ss_pred ccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHh--hCCEEEEeccccccCccCcccccccCC
Q psy6548 4 QFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGKLLAIHYED 80 (242)
Q Consensus 4 ~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~ 80 (242)
+..++.+|+++ +...++++++|++|.++|++|.+.+ +++|+++|++ ||+++|+|++|... ....+. .
T Consensus 149 v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a~~-~~~~p~-----~ 218 (415)
T 2fq6_A 149 TSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAAG-VLFKAL-----D 218 (415)
T ss_dssp EEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTTT-TSSCGG-----G
T ss_pred EEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCccc-ccCCcc-----c
Confidence 44568889988 5555668999999999999998776 9999999999 99999999999632 111111 2
Q ss_pred CCCCEEE--eeccccC-CccchheeEeChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q psy6548 81 VRPDIVI--LGKALSG-GLYPISAVLADDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSE 157 (242)
Q Consensus 81 ~~~~~~~--~sK~~~~-g~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~ 157 (242)
...|+++ ++|.+++ |-..+|++++++++++.+...........++..+..+..+++.+. ...+...++...+++.
T Consensus 219 ~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~l~--~r~~~~~~n~~~l~~~ 296 (415)
T 2fq6_A 219 FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLG--VRLRQHHESSLKVAEW 296 (415)
T ss_dssp GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHH
Confidence 3457776 6799994 312368888888777766542111112334554444444555432 2345556677778888
Q ss_pred HHhhcCC-------CCCCe---------EeeeceeEEEEecCC--chhHHHHHHHHHHCCceec------------c---
Q psy6548 158 LRSRLSP-------DIVPV---------VRGKGLLNAIVLDKS--ILEVYDVCIKMKDAGLVTK------------P--- 204 (242)
Q Consensus 158 l~~~l~~-------~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~------------~--- 204 (242)
| ++.+. ..... ..+.+.+++|.++.. ..+...+.+.|...++.++ |
T Consensus 297 L-~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~ 375 (415)
T 2fq6_A 297 L-AEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHI 375 (415)
T ss_dssp H-HTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHH
T ss_pred H-HcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCcc
Confidence 8 44321 11000 013577889998762 1356666665543332222 1
Q ss_pred ----------CCCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 205 ----------ISNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 205 ----------~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
...+.+|+++....++++++.+.+.|++
T Consensus 376 s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 376 AAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp HTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 1247899999999888888888888764
No 208
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.70 E-value=3e-16 Score=137.30 Aligned_cols=208 Identities=15% Similarity=0.087 Sum_probs=130.6
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEEe--eccccCCcc
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVIL--GKALSGGLY 97 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~~--sK~~~~g~~ 97 (242)
++++|+++.+++++|.+.+ +++|+++|++||+++++|++|+++......+.....++ .+|++++ +|+++++ +
T Consensus 259 ~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~ 333 (515)
T 2jis_A 259 VPFLVSATSGTTVLGAFDP----LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-L 333 (515)
T ss_dssp EEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-S
T ss_pred CcEEEEEeCCCCCCCCccC----HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCC-C
Confidence 5899999999999997766 99999999999999999999986533322121122244 6788885 7999987 7
Q ss_pred chheeEeChh--hhhcc----CCCCCC-----------CCC------CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q psy6548 98 PISAVLADDE--VMGTL----VPGTHG-----------STY------GGNPLACKLAMTALDVILEENMIENAYKMGEIF 154 (242)
Q Consensus 98 ~~g~~~~~~~--~~~~l----~~~~~~-----------~~~------~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l 154 (242)
++|+++.+++ +++.. .+...+ +++ ....+.+.+++.++..-.-+++.++..++++++
T Consensus 334 g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l 413 (515)
T 2jis_A 334 QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYL 413 (515)
T ss_dssp CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8999988765 54431 111100 001 011233333333332111134667788889999
Q ss_pred HHHHHhhcCC-CCCCeEeeeceeEEEEe-cC------Cchh--------HHHHHHHHHHCCceecc-----CCCCEEEEe
Q psy6548 155 RSELRSRLSP-DIVPVVRGKGLLNAIVL-DK------SILE--------VYDVCIKMKDAGLVTKP-----ISNNIIRLS 213 (242)
Q Consensus 155 ~~~l~~~l~~-~~~~~~~~~~~~~~~~~-~~------~~~~--------~~~~~~~l~~~gi~~~~-----~~~~~lR~~ 213 (242)
.+.| ++++. .+... +.. ..+.+.. +. ...+ ...+.+.|.++|+.+.. ...+++|++
T Consensus 414 ~~~L-~~~~g~~~~~~-~~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis 490 (515)
T 2jis_A 414 VEEM-KKREGFELVME-PEF-VNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVV 490 (515)
T ss_dssp HHHH-HTSTTEEESSC-CSS-SEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEE
T ss_pred HHHH-hcCCCEEEeCC-CCe-eEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEE
Confidence 9999 66542 11111 112 2344433 21 0001 12367788889976532 224689999
Q ss_pred c-cCcCCHHHHHHHHHHHHHHHHH
Q psy6548 214 P-ALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 214 ~-~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+ +...|++|++++++.|++++++
T Consensus 491 ~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 491 VANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCCHHHHHHHHHHHHHHHhh
Confidence 8 8889999999999999887654
No 209
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.69 E-value=3.3e-16 Score=133.71 Aligned_cols=214 Identities=16% Similarity=0.106 Sum_probs=134.9
Q ss_pred cccc-CCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 4 QFPV-KSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 4 ~~~~-~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
+..+ |.+|+++ +...++++++|++++++|++|.+.+ +++|+++|++||+++|+|++|++++..+... +.
T Consensus 125 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~----l~~i~~~a~~~g~~livD~~~~~~g~~~~~~-----~~ 195 (421)
T 2ctz_A 125 VRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPD----LEALAQAAREKGVALIVDNTFGMGGYLLRPL-----AW 195 (421)
T ss_dssp EEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGGGGTSCCGG-----GG
T ss_pred EEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccccccCCcc-----cc
Confidence 4556 7788888 5555568999999999999997776 9999999999999999999994454333322 33
Q ss_pred CCCEEE--eeccccC-CccchheeEeC---hhh----hhccCCC---CCC-----------------------CCCCCCH
Q psy6548 82 RPDIVI--LGKALSG-GLYPISAVLAD---DEV----MGTLVPG---THG-----------------------STYGGNP 125 (242)
Q Consensus 82 ~~~~~~--~sK~~~~-g~~~~g~~~~~---~~~----~~~l~~~---~~~-----------------------~~~~~~~ 125 (242)
.+|+++ ++|++++ | .++|+++.. +++ .+.+.+. .++ .....++
T Consensus 196 ~~Di~~~s~~K~l~~~g-~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~ 274 (421)
T 2ctz_A 196 GAALVTHSLTKWVGGHG-AVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP 274 (421)
T ss_dssp TCSEEEEETTTTTTCSS-CCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred CCeEEEECCcccccCCC-CcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 578875 7799995 5 688887764 122 1222221 010 1113456
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCC-CC--CeE--------------eeeceeEEEEecCCchhH
Q psy6548 126 LACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSPD-IV--PVV--------------RGKGLLNAIVLDKSILEV 188 (242)
Q Consensus 126 ~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~--~~~--------------~~~~~~~~~~~~~~~~~~ 188 (242)
+.++++...++.+. ...++..++.+++.+.| +..+.. .. ... .+.+.++.|.+.....+.
T Consensus 275 ~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L-~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~ 351 (421)
T 2ctz_A 275 FEAWVVLLGMETLS--LRAERHVENTLHLAHWL-LEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAA 351 (421)
T ss_dssp HHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHH-HTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHH
T ss_pred HHHHHHHcCcchHH--HHHHHHHHhHHHHHHHH-HhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHH
Confidence 65555555555432 23455567888888888 554321 00 000 356788999987631345
Q ss_pred HHHHHHHHHCCceeccC---------------------------CCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 189 YDVCIKMKDAGLVTKPI---------------------------SNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 189 ~~~~~~l~~~gi~~~~~---------------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
..+.+.+...++.++.+ .++.+|+++.. |+++++++.|++++
T Consensus 352 ~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 352 KRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp HHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred HHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence 55666654444333211 14789999544 57777787777664
No 210
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.69 E-value=1.6e-16 Score=138.01 Aligned_cols=211 Identities=13% Similarity=0.103 Sum_probs=136.8
Q ss_pred Chhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcc-cccccCCCCCCEE
Q psy6548 11 QVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKL-LAIHYEDVRPDIV 86 (242)
Q Consensus 11 d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~-~~~~~~~~~~~~~ 86 (242)
|+++ +.+.++++++|++ ++++++ .+.+ +++|+++|++||+++|+|++|. |+...+.. ..+. ..|++
T Consensus 181 D~d~le~~i~~~~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~----~~div 250 (483)
T 1rv3_A 181 DYDRLEENARLFHPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE----HCHVV 250 (483)
T ss_dssp CHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG----TCSEE
T ss_pred CHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC----CCcEE
Confidence 4455 3343367889988 666666 3443 9999999999999999999985 43222211 1111 35777
Q ss_pred E--eeccccCCccchheeEeChhhh---------------hccCCCCCCC-CCCCCHHHHHHHHHHHHHHHh---ccHHH
Q psy6548 87 I--LGKALSGGLYPISAVLADDEVM---------------GTLVPGTHGS-TYGGNPLACKLAMTALDVILE---ENMIE 145 (242)
Q Consensus 87 ~--~sK~~~~g~~~~g~~~~~~~~~---------------~~l~~~~~~~-~~~~~~~~~~~a~a~l~~~~~---~~~~~ 145 (242)
+ ++|+|+| ++.|++++++++. ..+....... ..+.+...+++..++++.... +++.+
T Consensus 251 ~~s~~K~l~G--prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~ 328 (483)
T 1rv3_A 251 TTTTHKTLRG--CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQR 328 (483)
T ss_dssp EEESSGGGCC--CSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred EecCcccCCC--CCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 6 5599965 5679998886532 2221110111 112333444444456665543 45678
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEee-eceeEEEEecCCchhHHHHHHHHHHCCceec----cC-----CCCEEEEecc
Q psy6548 146 NAYKMGEIFRSELRSRLSPDIVPVVRG-KGLLNAIVLDKSILEVYDVCIKMKDAGLVTK----PI-----SNNIIRLSPA 215 (242)
Q Consensus 146 ~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~-----~~~~lR~~~~ 215 (242)
+++++++++.+.| ++++-.+.. ++ ..++.++.+...+.+..++.+.|.+.||.+. |+ +.+++|++++
T Consensus 329 ~~~~~~~~l~~~L-~~~g~~~~~--~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~ 405 (483)
T 1rv3_A 329 QVVANCRALSAAL-VELGYKIVT--GGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTP 405 (483)
T ss_dssp HHHHHHHHHHHHH-HHTTCEEGG--GSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECH
T ss_pred HHHHHHHHHHHHH-HhcCCEecc--CCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecC
Confidence 8888999999999 665421111 11 2356777776432457778889999999998 64 3578999987
Q ss_pred CcCC----HHHHHHHHHHHHHHHHH
Q psy6548 216 LNIT----EQELREGLDIIINTINT 236 (242)
Q Consensus 216 ~~~t----~e~i~~~~~~l~~~l~~ 236 (242)
...+ ++|++++++.|+++++.
T Consensus 406 ~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 406 ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 6656 99999999999998876
No 211
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.67 E-value=5e-15 Score=128.44 Aligned_cols=211 Identities=11% Similarity=0.065 Sum_probs=133.0
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEEe--eccccCCccc
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVIL--GKALSGGLYP 98 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~~--sK~~~~g~~~ 98 (242)
+.++++....+++|.+-+ +++|+++|++||+++++|++|.+.......+.....++ ..|.+++ +|+++++ ..
T Consensus 242 ~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g 316 (481)
T 4e1o_A 242 PVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FD 316 (481)
T ss_dssp EEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SS
T ss_pred cEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-Cc
Confidence 677777777888887655 99999999999999999999975322221111111232 3477774 5999977 67
Q ss_pred hheeEeCh-hhhh-ccCCC--CC-----CC-------CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHH
Q psy6548 99 ISAVLADD-EVMG-TLVPG--TH-----GS-------TY-GGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 99 ~g~~~~~~-~~~~-~l~~~--~~-----~~-------~~-~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l 158 (242)
+|+++..+ .... .+... .. .. +. .+........+++++.+.. +++.++..++++++++.|
T Consensus 317 ~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L 396 (481)
T 4e1o_A 317 CTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLV 396 (481)
T ss_dssp CEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777654 3322 22110 00 00 00 0101122233444444332 346677888999999999
Q ss_pred HhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCcee-cc---CCCCEEEEeccCc-CCHHHHHHHHHHHHHH
Q psy6548 159 RSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVT-KP---ISNNIIRLSPALN-ITEQELREGLDIIINT 233 (242)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~-~~---~~~~~lR~~~~~~-~t~e~i~~~~~~l~~~ 233 (242)
++++. +....+....++++.+........++.++|.++|+++ .+ .+..++|+++... .|++++++++++|+++
T Consensus 397 -~~~~g-~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 474 (481)
T 4e1o_A 397 -RNDPS-FEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDA 474 (481)
T ss_dssp -HTCTT-EECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -hcCCC-eEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 66542 1111123456778887654345788999999998544 33 3567899996544 4899999999999999
Q ss_pred HHHHhh
Q psy6548 234 INTMAA 239 (242)
Q Consensus 234 l~~~~~ 239 (242)
++++.+
T Consensus 475 ~~~l~~ 480 (481)
T 4e1o_A 475 ATLILS 480 (481)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 987653
No 212
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.66 E-value=3.8e-15 Score=126.82 Aligned_cols=211 Identities=12% Similarity=0.147 Sum_probs=131.5
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccC-ccCcccccccCCCCCCEEE-
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLG-RTGKLLAIHYEDVRPDIVI- 87 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~- 87 (242)
|+++ +...+.++++|++++ ++|...+ +++|.++|++||+++|+||+|+.+. ..+.. .+...|+.+
T Consensus 119 d~~~l~~~i~~~~~~v~~~~---~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~~~ 186 (418)
T 2c81_A 119 DPQLIKSAITDKTKAIIPVH---LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQR-----AGTIGDIGAF 186 (418)
T ss_dssp CHHHHGGGCCTTEEEECCBC---CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEE
T ss_pred CHHHHHHhhCCCCeEEEEeC---CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEe-----cccccceEEE
Confidence 5666 444456788888764 5675543 9999999999999999999998653 22221 121234444
Q ss_pred -e--eccccCCccchheeEeC-hhhhhccCCCC-CC-------------CC------------CCCCHHHHHHHHHHHHH
Q psy6548 88 -L--GKALSGGLYPISAVLAD-DEVMGTLVPGT-HG-------------ST------------YGGNPLACKLAMTALDV 137 (242)
Q Consensus 88 -~--sK~~~~g~~~~g~~~~~-~~~~~~l~~~~-~~-------------~~------------~~~~~~~~~~a~a~l~~ 137 (242)
| +|++++| ++|+++++ +++++.+.+.. .+ .. ...+++..+.....++.
T Consensus 187 s~s~~K~~~~g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~ 264 (418)
T 2c81_A 187 SCQQGKVLTAG--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQE 264 (418)
T ss_dssp ECCTTSSSCSS--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTT
T ss_pred eccCCcccCCC--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHH
Confidence 5 8999875 68898884 67665553210 00 00 01223322222222222
Q ss_pred HHhccHHHHHHHHHHHHHHHHHhhcCC-CCCCeEee--e-c-eeEEEEecC---CchhHHHHHHHHHHC-Cce---eccC
Q psy6548 138 ILEENMIENAYKMGEIFRSELRSRLSP-DIVPVVRG--K-G-LLNAIVLDK---SILEVYDVCIKMKDA-GLV---TKPI 205 (242)
Q Consensus 138 ~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~--~-~-~~~~~~~~~---~~~~~~~~~~~l~~~-gi~---~~~~ 205 (242)
+ +++.++.+++++++++.| +.++. .......+ . . +++.+.++. .+.+..++.+.|.++ ||. +++.
T Consensus 265 ~--~~~~~~~~~~~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~ 341 (418)
T 2c81_A 265 L--DDKNAIREKNAMFLNDAL-SKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPP 341 (418)
T ss_dssp H--HHHHHHHHHHHHHHHHHH-TTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECC
T ss_pred H--HHHHHHHHHHHHHHHHHh-ccCCCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCccccccc
Confidence 2 345667777788888888 65532 11111111 1 1 234466653 014678899999999 999 7543
Q ss_pred C----------------------------------------CCEEEEeccCcC-CHHHHHHHHHHHHHHHHHHh
Q psy6548 206 S----------------------------------------NNIIRLSPALNI-TEQELREGLDIIINTINTMA 238 (242)
Q Consensus 206 ~----------------------------------------~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~~~ 238 (242)
. .+.+|++++..+ |+||++++++.|+++++++.
T Consensus 342 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 342 YLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp CCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 1 148999999999 99999999999999987654
No 213
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.65 E-value=3.4e-15 Score=126.22 Aligned_cols=200 Identities=13% Similarity=0.197 Sum_probs=128.8
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEEEee--ccccCCcc
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIVILG--KALSGGLY 97 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~s--K~~~~g~~ 97 (242)
++++|++++ ++|... .+++|.++|++||+++|+||+|+ |+...+... ..++ ..++.++| |.++ | .
T Consensus 122 ~~~~v~~~~---~~G~~~----~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~~~-~~~~~s~s~~K~l~-~-~ 189 (394)
T 1o69_A 122 KPKALILTH---LYGNAA----KMDEIVEICKENDIVLIEDAAEALGSFYKNKAL--GTFG-EFGVYSYNGNKIIT-T-S 189 (394)
T ss_dssp CCCEEEEEC---GGGCCC----CHHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEEEECCTTSSSC-C-S
T ss_pred CceEEEEEC---CCCChh----hHHHHHHHHHHcCCEEEEECcCcccceeCCccc--cccc-CcEEEEEeCCccCC-C-C
Confidence 688888887 456443 39999999999999999999997 553333211 1111 35677774 7665 4 5
Q ss_pred chheeEeC-hhhhhccCCCCC--------------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc
Q psy6548 98 PISAVLAD-DEVMGTLVPGTH--------------GSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRL 162 (242)
Q Consensus 98 ~~g~~~~~-~~~~~~l~~~~~--------------~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l 162 (242)
++|+++++ +++++.+.+... +.++..+++..+.+++.++.++ +..++.+++++++++.| +.+
T Consensus 190 ~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L-~~~ 266 (394)
T 1o69_A 190 GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKKREIYEWYKEFL-GEY 266 (394)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHH-TTT
T ss_pred CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh-ccc
Confidence 79999995 777766543111 1111244555555544444332 35678888899999998 554
Q ss_pred CCCCCCeE---eeeceeEEEEecCC--------------------chhHHHHHHHHHHCCceeccCCC------------
Q psy6548 163 SPDIVPVV---RGKGLLNAIVLDKS--------------------ILEVYDVCIKMKDAGLVTKPISN------------ 207 (242)
Q Consensus 163 ~~~~~~~~---~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~gi~~~~~~~------------ 207 (242)
-...... .....++++.++.. +.+..++.+.|.++||.++++..
T Consensus 267 -~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~ 345 (394)
T 1o69_A 267 -FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAK 345 (394)
T ss_dssp -EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCE
T ss_pred -ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccC
Confidence 1111111 11112466777642 13678899999999999986511
Q ss_pred ------------CEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 208 ------------NIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 208 ------------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
..+|+..+..+|++|++++++.|+++++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 346 AYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp EEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred CCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 34566667789999999999999887653
No 214
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.64 E-value=1.2e-15 Score=130.51 Aligned_cols=213 Identities=15% Similarity=0.083 Sum_probs=130.5
Q ss_pred cccccCCCChhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC
Q psy6548 3 LQFPVKSKQVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV 81 (242)
Q Consensus 3 ~~~~~~~~d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 81 (242)
.+..+|.+|+++ +...++++++|++|+++|++|.+.+ +++|+++|++||+++|+|++|+.. .......+|
T Consensus 148 ~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~~~----~~~~~~~~g- 218 (430)
T 3ri6_A 148 EVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMTPP----YLLEAKRLG- 218 (430)
T ss_dssp EEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTSCT----TTCCGGGGT-
T ss_pred EEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccc----ccCChHHcC-
Confidence 355678889998 5555668999999999999998775 899999999999999999999621 111111223
Q ss_pred CCCEEE--eeccccC-Cccchhe-eEe-Ch-hh------------------hhccCCC-CCCCCCCCCHHHHHHHHHHHH
Q psy6548 82 RPDIVI--LGKALSG-GLYPISA-VLA-DD-EV------------------MGTLVPG-THGSTYGGNPLACKLAMTALD 136 (242)
Q Consensus 82 ~~~~~~--~sK~~~~-g~~~~g~-~~~-~~-~~------------------~~~l~~~-~~~~~~~~~~~~~~~a~a~l~ 136 (242)
.|+++ ++|+++| | ..+|. ++. .+ .+ +..++.. ........++..+..++..++
T Consensus 219 -~div~~S~sK~l~g~g-~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~ 296 (430)
T 3ri6_A 219 -VDIEVLSSTKFISGGG-TSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE 296 (430)
T ss_dssp -CSEEEEECCCEEETTE-EECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH
T ss_pred -CEEEEECCcccccCCC-CceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 35555 7799985 3 33444 442 22 12 1111110 001111235555544444555
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHhhcCCCCCCeEe---------------eece-eEEEEecCCchhHHHHHHHHHHCCc
Q psy6548 137 VILEENMIENAYKMGEIFRSELRSRLSPDIVPVVR---------------GKGL-LNAIVLDKSILEVYDVCIKMKDAGL 200 (242)
Q Consensus 137 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi 200 (242)
.+. ...++..+++..+.+.| +..+.......+ +.|. +++|+++.. .++..|.+.|...++
T Consensus 297 ~l~--~r~~~~~~na~~la~~L-~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-~~~~~~~~~l~~~~~ 372 (430)
T 3ri6_A 297 TMA--LRIERSCQNAQELAHWL-LSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-EASYRFMDALKLIRR 372 (430)
T ss_dssp HHH--HHHHHHHHHHHHHHHHH-TTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-HHHHHHHHHCSSSEE
T ss_pred hHH--HHHHHHHHHHHHHHHHH-hCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-HHHHHHHHhCCccee
Confidence 443 23456677888888888 655421000011 2355 999999854 667788888765555
Q ss_pred eeccC---------------------------CCCEEEEeccCcCCHHHHHHHHHHHHHHH
Q psy6548 201 VTKPI---------------------------SNNIIRLSPALNITEQELREGLDIIINTI 234 (242)
Q Consensus 201 ~~~~~---------------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 234 (242)
.++.+ .++.||+++ ..|+.+.+++.|++++
T Consensus 373 ~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsv----G~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 373 ATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSV----GIEEIEDLKEDILQAL 429 (430)
T ss_dssp CSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEEC----CSSCHHHHHHHHHHHH
T ss_pred cCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEe----ccCCHHHHHHHHHHhh
Confidence 44322 356899994 4456677777777665
No 215
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.64 E-value=7.3e-15 Score=128.30 Aligned_cols=210 Identities=12% Similarity=0.059 Sum_probs=129.1
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEE--eeccccCCccc
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVI--LGKALSGGLYP 98 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~--~sK~~~~g~~~ 98 (242)
+++|+++.+++++|.+-+ +++|+++|++||+++++|++|.+.......+.....|+ ..|.++ .+|+++++ ..
T Consensus 249 ~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g 323 (511)
T 3vp6_A 249 PFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQ 323 (511)
T ss_dssp EEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SC
T ss_pred cEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cC
Confidence 889999999999998755 99999999999999999999975322111111111122 457777 55999977 77
Q ss_pred hheeEeCh-hhhhccCC---CCCC--------------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Q psy6548 99 ISAVLADD-EVMGTLVP---GTHG--------------STY-GGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRS 156 (242)
Q Consensus 99 ~g~~~~~~-~~~~~l~~---~~~~--------------~~~-~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~ 156 (242)
+|+++.++ .++..... .... .+. .+.+......+++++.+.. +++.++..++.+++++
T Consensus 324 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~ 403 (511)
T 3vp6_A 324 CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYA 403 (511)
T ss_dssp CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 88887654 34433211 0000 000 0111122333444554432 4567888889999999
Q ss_pred HHHhhcCC-CCCCeEeeeceeEEEEecCCc---------------hhHHHHHHHHHHCCceecc-----CCCCEEEEec-
Q psy6548 157 ELRSRLSP-DIVPVVRGKGLLNAIVLDKSI---------------LEVYDVCIKMKDAGLVTKP-----ISNNIIRLSP- 214 (242)
Q Consensus 157 ~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~gi~~~~-----~~~~~lR~~~- 214 (242)
.| ++.+. .+....+....++.+.+.... ....++.+.|.++|+++.. .+.+++|+++
T Consensus 404 ~L-~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~ 482 (511)
T 3vp6_A 404 KI-KNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVIS 482 (511)
T ss_dssp HH-HSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCC
T ss_pred HH-hcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEec
Confidence 99 66532 111110123344555443221 1134689999999975532 1235799998
Q ss_pred cCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 215 ALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 215 ~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
+...+.+||+++++.|++..+.+
T Consensus 483 ~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 483 NPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp CTTCCHHHHHHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHHHHHHHHhh
Confidence 78889999999999998877654
No 216
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.64 E-value=9.7e-15 Score=126.74 Aligned_cols=209 Identities=11% Similarity=0.040 Sum_probs=129.6
Q ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEE--eeccccCCccch
Q psy6548 23 CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVI--LGKALSGGLYPI 99 (242)
Q Consensus 23 ~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~--~sK~~~~g~~~~ 99 (242)
.+|++..+.+++|.+-+ +++|+++|++||+++++|++|.++......+.....++ ..|.++ .+|+++++ +++
T Consensus 237 ~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~ 311 (486)
T 1js3_A 237 FFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDC 311 (486)
T ss_dssp EEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSC
T ss_pred eEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cce
Confidence 47777777888897654 99999999999999999999975321111111001122 357666 45999977 789
Q ss_pred heeEeChh--hhhccCC---CCCC--C---------CC--C-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Q psy6548 100 SAVLADDE--VMGTLVP---GTHG--S---------TY--G-GNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSE 157 (242)
Q Consensus 100 g~~~~~~~--~~~~l~~---~~~~--~---------~~--~-~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~ 157 (242)
|+++.+++ +.+.+.. .... . .+ . +......+.+++++.+.. +++.++..++++++.+.
T Consensus 312 G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~ 391 (486)
T 1js3_A 312 SAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAF 391 (486)
T ss_dssp EEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99888643 2344421 0000 0 00 0 001112233344443322 34567777889999999
Q ss_pred HHhhcCC-CCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc----CCCCEEEEec-cCcCCHHHHHHHHHHHH
Q psy6548 158 LRSRLSP-DIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP----ISNNIIRLSP-ALNITEQELREGLDIII 231 (242)
Q Consensus 158 l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~----~~~~~lR~~~-~~~~t~e~i~~~~~~l~ 231 (242)
| ++++. .+.. +....++.+.++.......++.+.|.++|+++.. .+.+++|+++ +...+++++++++++|+
T Consensus 392 L-~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 468 (486)
T 1js3_A 392 V-LQDPRFEVCA--EVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIR 468 (486)
T ss_dssp H-HHCTTEEECS--CCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred H-hcCCCeEEeC--CCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 9 66542 1111 1234556666654312357899999999876532 2467899995 55578999999999999
Q ss_pred HHHHHHhh
Q psy6548 232 NTINTMAA 239 (242)
Q Consensus 232 ~~l~~~~~ 239 (242)
++++++.+
T Consensus 469 ~~~~~~~~ 476 (486)
T 1js3_A 469 GLAAELLA 476 (486)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99887654
No 217
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.64 E-value=1.2e-14 Score=125.85 Aligned_cols=211 Identities=11% Similarity=-0.008 Sum_probs=132.5
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEEe--eccccCCccc
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVIL--GKALSGGLYP 98 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~~--sK~~~~g~~~ 98 (242)
+.++++....+++|.+-+ +++|+++|++||+++++|++|.+.............++ ..|.+++ +|+++++ .+
T Consensus 235 ~~~v~~~~~~t~~G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g 309 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVN-FD 309 (475)
T ss_dssp EEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SS
T ss_pred cEEEEEEecCCCCcCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCC-Cc
Confidence 666777777788887755 99999999999999999999965211111111111232 3577774 5999977 77
Q ss_pred hheeEeChh-hh-hccCC--CCC-----C-------CCCCCC-HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHH
Q psy6548 99 ISAVLADDE-VM-GTLVP--GTH-----G-------STYGGN-PLACKLAMTALDVILE---ENMIENAYKMGEIFRSEL 158 (242)
Q Consensus 99 ~g~~~~~~~-~~-~~l~~--~~~-----~-------~~~~~~-~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l 158 (242)
+|+++..++ .. +.+.. ... + ++...+ +......+++++.+.. +++.++..++++++++.|
T Consensus 310 ~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L 389 (475)
T 3k40_A 310 CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLC 389 (475)
T ss_dssp CEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776643 32 21111 000 0 000011 1222333445554433 456777888999999999
Q ss_pred HhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceec-c---CCCCEEEEeccC-cCCHHHHHHHHHHHHHH
Q psy6548 159 RSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTK-P---ISNNIIRLSPAL-NITEQELREGLDIIINT 233 (242)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~-~---~~~~~lR~~~~~-~~t~e~i~~~~~~l~~~ 233 (242)
++++. +....+....++.+.++.......++.++|.++|.++. + .+..++|+++.. ..|+++|++++++|+++
T Consensus 390 -~~~~g-~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 467 (475)
T 3k40_A 390 -VADSR-FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAA 467 (475)
T ss_dssp -HHSTT-EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -hcCCC-EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 66642 11111234567777776543457889999999887553 2 356789999654 45899999999999999
Q ss_pred HHHHhh
Q psy6548 234 INTMAA 239 (242)
Q Consensus 234 l~~~~~ 239 (242)
++++.+
T Consensus 468 ~~~~~~ 473 (475)
T 3k40_A 468 ADEMEQ 473 (475)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 988754
No 218
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.63 E-value=2.2e-14 Score=122.91 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=128.1
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...++++++|++.+. .|... .+++|.++|++||+++|+||+|+ |....+ ..++..+|++++
T Consensus 147 d~~~l~~~i~~~~~~v~~~~~---~g~~~----~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~~d~~~~ 214 (437)
T 3bb8_A 147 NASLIEAAVSDKTKAIMIAHT---LGNLF----DLAEVRRVADKYNLWLIEDCCDALGSTYDG-----KMAGTFGDIGTV 214 (437)
T ss_dssp CGGGHHHHCCTTEEEEEEECG---GGCCC----CHHHHHHHHHHHTCEEEEECTTCTTCEETT-----EETTSSSSEEEE
T ss_pred CHHHHHHhcCCCCeEEEEeCC---CCChh----cHHHHHHHHHHcCCEEEEECccccCceECC-----eecccccCEEEE
Confidence 5666 4434557888888642 23222 39999999999999999999997 322211 223434677654
Q ss_pred --e--ccccCCccchheeEeChhhhhcc----CCCC------------------------------------CCCCCCCC
Q psy6548 89 --G--KALSGGLYPISAVLADDEVMGTL----VPGT------------------------------------HGSTYGGN 124 (242)
Q Consensus 89 --s--K~~~~g~~~~g~~~~~~~~~~~l----~~~~------------------------------------~~~~~~~~ 124 (242)
+ |.+++ .++|+++++++.+..+ .... .++++..+
T Consensus 215 s~~~~k~l~~--g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 292 (437)
T 3bb8_A 215 SFYPAKHITM--GEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKIT 292 (437)
T ss_dssp ECSTTSSSCC--SSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCB
T ss_pred ECcCCcCCCC--CCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCC
Confidence 3 55544 4578888875433221 1100 11222345
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCC-CCCeE---eeec---eeEEEEecCCchhHHHHHHHHHH
Q psy6548 125 PLACKLAMTALDVILEENMIENAYKMGEIFRSELRSRLSPD-IVPVV---RGKG---LLNAIVLDKSILEVYDVCIKMKD 197 (242)
Q Consensus 125 ~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 197 (242)
++..++++++++.+ ++..++.+++.+++++.| +.++.. ..... ...+ +.+.+..+.. .+.+++.+.|.+
T Consensus 293 ~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~ 368 (437)
T 3bb8_A 293 DMQAACGLAQLERI--EEFVEKRKANFKYLKDAL-QSCADFIELPEATENSDPSWFGFPITLKEDSG-VSRIDLVKFLDE 368 (437)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHG-GGGTTTEECCCCCTTEECCCSSEEEEECGGGS-SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh-hccCCccccCCCCCCCceeeEEEEEEECCcCc-CcHHHHHHHHHH
Confidence 67777777776654 345566688888999999 666321 11100 0112 1222333211 357889999999
Q ss_pred CCceeccCCC----------------------------CEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 198 AGLVTKPISN----------------------------NIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 198 ~gi~~~~~~~----------------------------~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
+||.+++... +.+|++++..+|++|++++++.|+++++
T Consensus 369 ~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 369 AKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp TTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 9999875421 1499999999999999999999987653
No 219
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.63 E-value=2e-15 Score=130.69 Aligned_cols=213 Identities=14% Similarity=0.094 Sum_probs=135.5
Q ss_pred CChhh--hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCc-ccccccCCCCCCE
Q psy6548 10 KQVPA--KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGK-LLAIHYEDVRPDI 85 (242)
Q Consensus 10 ~d~~~--~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~~~ 85 (242)
.|+++ +.+.++++++|++....++ ...+ +++|+++|++||+++++|++|. |+...|. ...++ ..|+
T Consensus 190 iD~d~le~~l~~~~~klIi~~~s~~~--~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~----~aDi 259 (490)
T 2a7v_A 190 IDYNQLALTARLFRPRLIIAGTSAYA--RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADI 259 (490)
T ss_dssp BCHHHHHHHHHHHCCSEEEECCSSCC--SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG----TCSE
T ss_pred cCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC----CCCE
Confidence 35666 3344445677777654332 2222 9999999999999999999984 4322222 11111 2466
Q ss_pred EE--eeccccCCccchheeEeChh---------------hhhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHh---ccHH
Q psy6548 86 VI--LGKALSGGLYPISAVLADDE---------------VMGTLVPGTHGSTYG-GNPLACKLAMTALDVILE---ENMI 144 (242)
Q Consensus 86 ~~--~sK~~~~g~~~~g~~~~~~~---------------~~~~l~~~~~~~~~~-~~~~~~~~a~a~l~~~~~---~~~~ 144 (242)
++ ++|+|+| .+.|+++++++ +.+.++.....+..+ .++..+++..++++.... +++.
T Consensus 260 v~~S~hK~l~G--p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~ 337 (490)
T 2a7v_A 260 VTTTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS 337 (490)
T ss_dssp EEEESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EEECCcccCcc--ccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHH
Confidence 66 6799965 46788888764 223333221222222 233444444445555432 4567
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceecc----C-----CCCEEEEec-
Q psy6548 145 ENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKP----I-----SNNIIRLSP- 214 (242)
Q Consensus 145 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~----~-----~~~~lR~~~- 214 (242)
+++.++++++++.| ++.+-.+... ....+++++++...+.+..++.+.|.+.||.+.. . .++.+|+..
T Consensus 338 ~~~~~na~~L~~~L-~~~G~~v~~~-~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~ 415 (490)
T 2a7v_A 338 LQVLKNARAMADAL-LERGYSLVSG-GTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAP 415 (490)
T ss_dssp HHHHHHHHHHHHHH-HHTTCEEGGG-SCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESH
T ss_pred HHHHHHHHHHHHHH-HHcCcEEecC-CCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEeccc
Confidence 88889999999999 6654222111 1234678888876534678889999999999963 2 357899954
Q ss_pred ---cCcCCHHHHHHHHHHHHHHHHH
Q psy6548 215 ---ALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 215 ---~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
+..++++|++++++.|.++++.
T Consensus 416 a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 416 ALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHh
Confidence 4467999999999999998864
No 220
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.62 E-value=6.1e-14 Score=120.18 Aligned_cols=201 Identities=14% Similarity=0.126 Sum_probs=127.6
Q ss_pred CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecc-ccccCccCcccccccCCCCCCEEEee-cccc--
Q psy6548 18 SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEV-QTGLGRTGKLLAIHYEDVRPDIVILG-KALS-- 93 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~-~~~~~~~g~~~~~~~~~~~~~~~~~s-K~~~-- 93 (242)
.++++++|+++.+ |++|.+.+ +++|+++|++||+++++|-. ++ ++..... .. ...|++++| |.|+
T Consensus 193 i~~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~a-~g~~~~~---~~--~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 193 VGEEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPLS-LGVLKPP---GA--YGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCTTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTTG-GGTBCCH---HH--HTCSEEEEECTTTTCC
T ss_pred hCCCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechhh-ccCcCCC---cc--CCCCEEEECCcccCCC
Confidence 3567999999988 99997775 99999999999999996622 22 2211111 11 246888864 6543
Q ss_pred ---CCccchheeEeChhhhhccCCCCC--------------------------CCCCCC---CHHHHHHHHHHHHHHHh-
Q psy6548 94 ---GGLYPISAVLADDEVMGTLVPGTH--------------------------GSTYGG---NPLACKLAMTALDVILE- 140 (242)
Q Consensus 94 ---~g~~~~g~~~~~~~~~~~l~~~~~--------------------------~~~~~~---~~~~~~~a~a~l~~~~~- 140 (242)
+| .++|++++++++++.+..... ..++.. +.++...+...+..+..
T Consensus 262 ~~~~G-p~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~ 340 (438)
T 1wyu_A 262 MGFGG-PHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPE 340 (438)
T ss_dssp CGGGC-SCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCC-CCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHH
Confidence 45 578999999888877643211 112222 22222111112443332
Q ss_pred --ccHHHHHHHHHHHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCcee--ccC---CCCEEEEe
Q psy6548 141 --ENMIENAYKMGEIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVT--KPI---SNNIIRLS 213 (242)
Q Consensus 141 --~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~--~~~---~~~~lR~~ 213 (242)
+++.++.+++++++++.| ++++. +....+ ...+..+.+... .+..++.++|.++||.+ .++ +++.+|++
T Consensus 341 g~~~~~~~~~~~~~~l~~~L-~~~~g-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis 416 (438)
T 1wyu_A 341 GLREVALKSVEMAHKLHALL-LEVPG-VRPFTP-KPFFNEFALALP-KDPEAVRRALAERGFHGATPVPREYGENLALFA 416 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTSTT-CEECSC-SSBCSEEEEECS-SCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCC-eEECCC-CCeEEEEEEeCC-CCHHHHHHHHHHCCceeccccccccCCCeEEEE
Confidence 345677788888898988 66631 111111 122222333222 35788999999999999 443 37899999
Q ss_pred ccCcCCHHHHHHHHHHHHHHH
Q psy6548 214 PALNITEQELREGLDIIINTI 234 (242)
Q Consensus 214 ~~~~~t~e~i~~~~~~l~~~l 234 (242)
++..+|++|+++++++|++++
T Consensus 417 ~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 417 ATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CCTTCCHHHHHHHHHHHHHHC
T ss_pred ecccCCHHHHHHHHHHHHHHh
Confidence 998899999999999998764
No 221
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.61 E-value=4e-14 Score=119.33 Aligned_cols=203 Identities=11% Similarity=0.109 Sum_probs=130.3
Q ss_pred Chhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc-ccCccCcccccccCCCCCCEEEe
Q psy6548 11 QVPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT-GLGRTGKLLAIHYEDVRPDIVIL 88 (242)
Q Consensus 11 d~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~ 88 (242)
|+++ +...+.++++|++.+. .|... .+++|.++|++||+++|+||+|+ |... ....++..+++.++
T Consensus 117 d~~~l~~~i~~~~~~v~~~~~---~g~~~----~~~~i~~l~~~~~~~li~D~a~~~g~~~-----~~~~~g~~~~~~~~ 184 (390)
T 3b8x_A 117 DIESLKEAVTDSTKAILTVNL---LGNPN----NFDEINKIIGGRDIILLEDNCESMGATF-----NNKCAGTFGLMGTF 184 (390)
T ss_dssp CHHHHHHHCCTTEEEEEEECG---GGCCC----CHHHHHHHHTTSCCEEEEECTTCTTCEE-----TTEETTSSSSEEEE
T ss_pred CHHHHHHHhCcCCeEEEEECC---ccChh----hHHHHHHHHHHcCCEEEEECcCcccCEE-----CCcccccccceEEE
Confidence 5666 4444457888888642 34333 39999999999999999999997 3211 11344666788888
Q ss_pred ecccc----CCccchheeEeCh-hhhhccCC---CC----------------------------CCCCCCCCHHHHHHHH
Q psy6548 89 GKALS----GGLYPISAVLADD-EVMGTLVP---GT----------------------------HGSTYGGNPLACKLAM 132 (242)
Q Consensus 89 sK~~~----~g~~~~g~~~~~~-~~~~~l~~---~~----------------------------~~~~~~~~~~~~~~a~ 132 (242)
||..+ +| . .|++++++ ++.+.+.+ .. .+.++..+++..++++
T Consensus 185 s~~~~k~~~~g-~-gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l 262 (390)
T 3b8x_A 185 SSFYSNHIATM-E-GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGI 262 (390)
T ss_dssp ECCTTSSSCSS-S-CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHH
T ss_pred EccCCCCCccC-C-ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHH
Confidence 76444 33 2 47787775 55443221 10 1223336677777777
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHhhcCCC-CCCeE-eeeceeEEEEecCC-chhHHHHHHHHHHCCceeccC----
Q psy6548 133 TALDVILEENMIENAYKMGEIFRSELRSRLSPD-IVPVV-RGKGLLNAIVLDKS-ILEVYDVCIKMKDAGLVTKPI---- 205 (242)
Q Consensus 133 a~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~~---- 205 (242)
+.++.++ +..++.+++++++++.| +.++.. ..... ......+++.++.. +.+.+++.+.|.++||.+++.
T Consensus 263 ~~l~~l~--~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~ 339 (390)
T 3b8x_A 263 EQLKKLP--RFISVRRKNAEYFLDKF-KDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGN 339 (390)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHH-TTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSS
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHh-cCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCc
Confidence 6666543 46778888899999999 665321 11110 11122355565531 136788999999999998752
Q ss_pred ---C-C---------------------CEEEEeccCcCCHHHHHHHHHHH
Q psy6548 206 ---S-N---------------------NIIRLSPALNITEQELREGLDII 230 (242)
Q Consensus 206 ---~-~---------------------~~lR~~~~~~~t~e~i~~~~~~l 230 (242)
. + +.+|++++..+|++|++++++.|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 340 FLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp GGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred hhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 1 0 25999999999999999999876
No 222
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.60 E-value=3.4e-15 Score=127.64 Aligned_cols=201 Identities=14% Similarity=0.063 Sum_probs=132.4
Q ss_pred hhh-hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEE--e
Q psy6548 12 VPA-KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVI--L 88 (242)
Q Consensus 12 ~~~-~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~--~ 88 (242)
+++ +...+.+++++++++++|++|.+.+ +.+ + ++..+.|+.+.+ .. . .........++++ |
T Consensus 186 ~~~l~~~~~~~~k~v~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~--~~-~--s~~~~~~~~~i~~~S~ 249 (427)
T 2hox_A 186 AANYVNVSNPEQYIEMVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW--PH-Y--TPIKYKADEDILLFTM 249 (427)
T ss_dssp GGGGTTCSCGGGEEEEEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS--TT-T--SCCCSCBCCSEEEEEH
T ss_pred HHHHHHhhcCCceEEEEcCCCCCcccccH--HHH-------c--CCCEEEeecccC--CC-C--CccccCCCceEEEEeC
Confidence 444 3333457888888899999997776 322 2 456777877642 11 1 1111111223444 8
Q ss_pred ecccc-CCccchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---------c----cHHHHHHHHHHH
Q psy6548 89 GKALS-GGLYPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE---------E----NMIENAYKMGEI 153 (242)
Q Consensus 89 sK~~~-~g~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~---------~----~~~~~~~~~~~~ 153 (242)
||.++ +| +|+||+++ ++++++.+.+......++.+.+++.++.++++...+ + ...+.++++++.
T Consensus 250 SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
T 2hox_A 250 SKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVN 328 (427)
T ss_dssp HHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHH
T ss_pred hhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHH
Confidence 89998 88 99999999 588888877643334456788888877777765321 1 234667777888
Q ss_pred HHHHHHhhcCC-CC---C-C--------eEeeeceeEEEEecCCchhHHHHHHHHH-HCCceeccC-----CCCEEEEec
Q psy6548 154 FRSELRSRLSP-DI---V-P--------VVRGKGLLNAIVLDKSILEVYDVCIKMK-DAGLVTKPI-----SNNIIRLSP 214 (242)
Q Consensus 154 l~~~l~~~l~~-~~---~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~~-----~~~~lR~~~ 214 (242)
+++.| ++++. .+ . . ..+..++++|+.++.+ ..++++.|+ ++||.+.|+ +++++|+++
T Consensus 329 l~~~L-~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~ 404 (427)
T 2hox_A 329 ITALL-DQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE---EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSL 404 (427)
T ss_dssp HHHHH-TTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG---GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEEC
T ss_pred HHHHH-HhCcCccccccccccccccccccCCCCceEEEEECCCc---HHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEe
Confidence 88888 55421 11 0 1 1233478899998752 345667765 789999875 368999995
Q ss_pred cCcCCHHHHHHHHHHHHHHHH
Q psy6548 215 ALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 215 ~~~~t~e~i~~~~~~l~~~l~ 235 (242)
. .+++++++++++|++.++
T Consensus 405 ~--~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 405 I--KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp S--SCHHHHHHHHHHHHHHHT
T ss_pred c--CCHHHHHHHHHHHHHHHh
Confidence 5 589999999999988764
No 223
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.57 E-value=1.8e-13 Score=114.66 Aligned_cols=203 Identities=10% Similarity=0.048 Sum_probs=139.4
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee--ccc
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG--KAL 92 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s--K~~ 92 (242)
+...++++++|.+....+.+|.+.|- +|+++|+++++|.+++ ++ ..+..++.++ ++++| |++
T Consensus 146 ~~~i~~~t~lV~~~h~et~tG~~~pi---------i~~~~~~~~~vD~~q~-~g--~~~id~~~~~----~~~~s~~K~~ 209 (377)
T 3e77_A 146 TWNLNPDASYVYYCANETVHGVEFDF---------IPDVKGAVLVCDMSSN-FL--SKPVDVSKFG----VIFAGAQKNV 209 (377)
T ss_dssp GCCCCTTCSCEEEESEETTTTEECSS---------CCCCTTCCEEEECTTT-TT--SSCCCGGGCS----EEEEEGGGTT
T ss_pred HhccCCCccEEEEeCccCchheEchh---------hhccCCCEEEEEcccc-cC--CCCCchhhcC----EEEEeccccc
Confidence 44456788888888888888987772 4778999999999996 32 1233344443 45555 999
Q ss_pred cCCccchheeEeChhhhhccCCCC-----------CCCCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHH
Q psy6548 93 SGGLYPISAVLADDEVMGTLVPGT-----------HGSTY-GGNPLACKLAMTALDVILEE----NMIENAYKMGEIFRS 156 (242)
Q Consensus 93 ~~g~~~~g~~~~~~~~~~~l~~~~-----------~~~~~-~~~~~~~~~a~a~l~~~~~~----~~~~~~~~~~~~l~~ 156 (242)
| + .++|+++.++++++.+.+.. ...++ +.+.....+..++++++.+. .+.++.+++.+++++
T Consensus 210 g-p-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~ 287 (377)
T 3e77_A 210 G-S-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYE 287 (377)
T ss_dssp S-C-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred C-C-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 5 4 56888888888876665321 11222 34455666666788877654 366788889999999
Q ss_pred HHHhhcCCC--CCCeEee-eceeEEEEecCCc--hhH-HHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHH
Q psy6548 157 ELRSRLSPD--IVPVVRG-KGLLNAIVLDKSI--LEV-YDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLD 228 (242)
Q Consensus 157 ~l~~~l~~~--~~~~~~~-~~~~~~~~~~~~~--~~~-~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~ 228 (242)
.| ++++.- ....... .+..+.|.++... .+. ..+.+.|.++||.+.++. .+.+|+++..++|+||++++++
T Consensus 288 ~L-~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~ 366 (377)
T 3e77_A 288 II-DNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAA 366 (377)
T ss_dssp HH-HTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHH
T ss_pred HH-HhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHH
Confidence 99 666421 1111112 2345778887620 122 468888889999997652 3569999999999999999999
Q ss_pred HHHHHHHH
Q psy6548 229 IIINTINT 236 (242)
Q Consensus 229 ~l~~~l~~ 236 (242)
.|++.+++
T Consensus 367 al~~~~~~ 374 (377)
T 3e77_A 367 FMKKFLEM 374 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.53 E-value=2.4e-13 Score=122.77 Aligned_cols=209 Identities=12% Similarity=0.020 Sum_probs=129.0
Q ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc---cCccCc---ccccccCCCC-CC-EEE--eeccc
Q psy6548 23 CAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG---LGRTGK---LLAIHYEDVR-PD-IVI--LGKAL 92 (242)
Q Consensus 23 ~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~---~~~~g~---~~~~~~~~~~-~~-~~~--~sK~~ 92 (242)
++++++.+ +++|.+.+ +++|+++|++||+++++||+|.+ |+.... ....+.++.. ++ +++ ++|++
T Consensus 283 klviv~~p-n~~G~v~d----l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L 357 (730)
T 1c4k_A 283 RLAVIQLG-TYDGTIYN----AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ 357 (730)
T ss_dssp SEEEEESB-CTTSEEEC----HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS
T ss_pred eEEEEECC-CCCCeecC----HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC
Confidence 66666654 46787765 99999999999999999999963 221111 1111122332 11 444 67998
Q ss_pred cCCccchheeEeChhhhh---------ccCCC-CCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Q psy6548 93 SGGLYPISAVLADDEVMG---------TLVPG-THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELR 159 (242)
Q Consensus 93 ~~g~~~~g~~~~~~~~~~---------~l~~~-~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~ 159 (242)
+|. ...|++..+++.+. .+... ....+.+.+...+++..++++.+.. +++.++..++.+++++.|
T Consensus 358 ~g~-~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L- 435 (730)
T 1c4k_A 358 AGF-SQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKL- 435 (730)
T ss_dssp SCC-TTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCC-CCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-
Confidence 753 23445544433221 11100 0112234455555555556665543 346778888899999999
Q ss_pred hh-cCC-CC-CCeE--------------------------------e--eec--ee----EEEEecC----------Cch
Q psy6548 160 SR-LSP-DI-VPVV--------------------------------R--GKG--LL----NAIVLDK----------SIL 186 (242)
Q Consensus 160 ~~-l~~-~~-~~~~--------------------------------~--~~~--~~----~~~~~~~----------~~~ 186 (242)
++ +.. .+ .... . ..+ .+ +.+..+. .+.
T Consensus 436 ~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~ 515 (730)
T 1c4k_A 436 IKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGV 515 (730)
T ss_dssp HHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCC
T ss_pred hhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCC
Confidence 55 321 00 0000 0 011 01 3455431 124
Q ss_pred hHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 187 EVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 187 ~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
.+.++.+.|.++||.+...+...+|++++..+|+++++++++.|.++.+.+.
T Consensus 516 ~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 516 PATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 6788999999999999888889999999999999999999999999887653
No 225
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.53 E-value=2.9e-13 Score=113.93 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=135.2
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee--ccc
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG--KAL 92 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s--K~~ 92 (242)
+...++++++|.+..+.+.+|.++++ +++|. +|+++++|.+++ +|. .+..++.++ ++++| |++
T Consensus 160 ~~~l~~~t~lV~~~h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs-~g~--~pidv~~~~----~~~~s~hK~l 224 (386)
T 3qm2_A 160 EWQLSDNAAYLHYCPNETIDGIAIDE---TPDFG-----PEVVVTADFSST-ILS--APLDVSRYG----VIYAGAQKNI 224 (386)
T ss_dssp GCCCCTTCSCEEECSEETTTTEECCC---CCCCC-----TTCCEEEECTTT-TTS--SCCCGGGCS----EEEEETTTTT
T ss_pred HhhcCCCCcEEEEECCcCCcCEecCc---hhhhc-----CCCEEEEEcccc-cCC--CCCCccccC----EEEEeccccc
Confidence 44456789999999888888975332 44442 899999999996 322 233334443 44454 999
Q ss_pred cCCccchheeEeChhhhhccCCCCC-----------CCCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHH
Q psy6548 93 SGGLYPISAVLADDEVMGTLVPGTH-----------GSTY-GGNPLACKLAMTALDVILEE----NMIENAYKMGEIFRS 156 (242)
Q Consensus 93 ~~g~~~~g~~~~~~~~~~~l~~~~~-----------~~~~-~~~~~~~~~a~a~l~~~~~~----~~~~~~~~~~~~l~~ 156 (242)
| + .++|+++.++++.+.+.+..- +..+ +.|.....+..++++.+.+. .+.++.+++.+++++
T Consensus 225 G-P-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~ 302 (386)
T 3qm2_A 225 G-P-AGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYG 302 (386)
T ss_dssp C-C-TTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred C-C-CccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 6 5 678999999888766654210 1111 23445566666777776543 356778888999999
Q ss_pred HHHhhcCC-CCCCeE-eeeceeEEEEecCCchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 157 ELRSRLSP-DIVPVV-RGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 157 ~l~~~l~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
.| ++++- ...... ......+.|.++....+ .++...|.++||.+..+. .+.+|+++..++|+||++++++.|++
T Consensus 303 ~l-~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 303 VI-DNSDFYRNDVAQANRSRMNVPFQLADNTLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMID 380 (386)
T ss_dssp HH-HTCSSEECCBCGGGBCSSEEEEEESSGGGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HH-HHCCCcccCCCHHHcCceEEEEECCCcccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 99 66641 111111 12234677888753234 678888999999987652 24599999999999999999999998
Q ss_pred HHHH
Q psy6548 233 TINT 236 (242)
Q Consensus 233 ~l~~ 236 (242)
..++
T Consensus 381 ~~~~ 384 (386)
T 3qm2_A 381 FERR 384 (386)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 226
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.52 E-value=1.1e-13 Score=116.41 Aligned_cols=208 Identities=10% Similarity=0.068 Sum_probs=128.7
Q ss_pred Chhh--hcCCCCC--EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccC-CCCCCE
Q psy6548 11 QVPA--KLKSNPN--ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYE-DVRPDI 85 (242)
Q Consensus 11 d~~~--~~~~~~~--~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~ 85 (242)
|+++ +.+.+++ +++|+.. +++|...+ +++|.++|+ ||+++|+|++|+ ++..... ... +...|+
T Consensus 115 d~~~l~~~i~~~~~~tk~v~~~---~~~G~~~~----~~~i~~la~-~~~~vi~D~a~a-~g~~~~~---~~~g~~~~d~ 182 (377)
T 3ju7_A 115 DKTVLWDKIEELKEEVAIVVPY---ATFGSWMN----LEEYEELEK-KGVPVVVDAAPG-FGLMNGG---MHYGQDFSGM 182 (377)
T ss_dssp CHHHHHHHHHHHGGGEEEECCB---CGGGBCCC----CHHHHHHHH-TTCCBEEECTTC-TTCEETT---EETTTTCSSE
T ss_pred CHHHHHHHHhcCCCCceEEEEE---CCCCCccC----HHHHHHHHh-cCCEEEEECCCc-cCCeECC---EeccCCCCcE
Confidence 5565 3343444 8888733 34675554 889999999 999999999996 2211111 112 222466
Q ss_pred EEee----ccccCCccchheeEe-ChhhhhccCCCC------------CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Q psy6548 86 VILG----KALSGGLYPISAVLA-DDEVMGTLVPGT------------HGSTYGGNPLACKLAMTALDVILEENMIENAY 148 (242)
Q Consensus 86 ~~~s----K~~~~g~~~~g~~~~-~~~~~~~l~~~~------------~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~ 148 (242)
.++| |.+++| ..|+++. ++++++.++... .+..+..+++.++.+++.++.+ +.+.++.+
T Consensus 183 ~~~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l--~~~~~~~~ 258 (377)
T 3ju7_A 183 IIYSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKW--DDKLKERT 258 (377)
T ss_dssp EEEECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTH--HHHHHHHH
T ss_pred EEEECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHH--HHHHHHHH
Confidence 6654 999865 3555555 456655443211 2334556677666666665533 34567788
Q ss_pred HHHHHHHHHHHhhcCCC-CCCeEe----eeceeEEEEecCCchhHHHHHHHHHHCCceeccCC-----------------
Q psy6548 149 KMGEIFRSELRSRLSPD-IVPVVR----GKGLLNAIVLDKSILEVYDVCIKMKDAGLVTKPIS----------------- 206 (242)
Q Consensus 149 ~~~~~l~~~l~~~l~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~----------------- 206 (242)
++++++.+.| +.++.. ...... ....++.+.++.. .+.+++.++|.++||.++...
T Consensus 259 ~~~~~~~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~ 336 (377)
T 3ju7_A 259 RISEWYKQLL-QSNGLMKKGWQLQKTEAVIQQFMPILCPEE-VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTD 336 (377)
T ss_dssp HHHHHHHHHH-HHTTTTTTTCBCCCCSCBCCSSEEEECCTT-SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSC
T ss_pred HHHHHHHHHh-cCCCCccccccCCCCCcceEEEEEEEeCCh-hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCC
Confidence 8888999999 666521 111111 1112334554443 347899999999999885421
Q ss_pred --------CCEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 207 --------NNIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 207 --------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
...+|+.++...|++|++++++.|++.+.+
T Consensus 337 ~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 337 LTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp CHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred CHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 247999988899999999999999887765
No 227
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.51 E-value=3.3e-13 Score=115.32 Aligned_cols=186 Identities=12% Similarity=0.075 Sum_probs=120.4
Q ss_pred ccccCCC-----Chhh-hcCCCCCEEEEEEcc-cccCCCcccCCHHHHHHHHHHHHh--hCCEEEEeccccccCccCccc
Q psy6548 4 QFPVKSK-----QVPA-KLKSNPNICAFMVEP-IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGKLL 74 (242)
Q Consensus 4 ~~~~~~~-----d~~~-~~~~~~~~~~i~~e~-~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~ 74 (242)
+..+|++ |+++ +...+.++++|++++ ++|++| ...+.+.+++|+++|++ ||+++|+||+|.++.....+.
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~-~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATR-PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSS-CCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCC-CcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 3456663 7777 444456899999995 666666 45667789999999999 999999999998654333222
Q ss_pred ccccCCCCCCEEE--eeccccCCc-cchheeEeChhhhhccCCC----CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Q psy6548 75 AIHYEDVRPDIVI--LGKALSGGL-YPISAVLADDEVMGTLVPG----THGSTYGGNPLACKLAMTALDVILEENMIENA 147 (242)
Q Consensus 75 ~~~~~~~~~~~~~--~sK~~~~g~-~~~g~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~ 147 (242)
.++ .|+++ ++|+++|++ .+.|++++++++++.+... ..+.+.+.+.....++...++.+ +...++.
T Consensus 221 ---~~g--~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~ 293 (431)
T 3ht4_A 221 ---HVG--ADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQA 293 (431)
T ss_dssp ---GTT--CSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHH
T ss_pred ---ccC--CeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhH--HHHHHHH
Confidence 223 45555 789998631 3458899999888877531 12222222211122233344433 3456778
Q ss_pred HHHHHHHHHHHHhhcCCCCC--CeEeeeceeEEEEecCCchhHHHHHHHHHHCC
Q psy6548 148 YKMGEIFRSELRSRLSPDIV--PVVRGKGLLNAIVLDKSILEVYDVCIKMKDAG 199 (242)
Q Consensus 148 ~~~~~~l~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 199 (242)
.+++.++++.| +.++..+. ...+..+.++.+.+++. ....++++.|.+..
T Consensus 294 ~~~a~~l~~~L-~~~g~~v~p~~~~~~~~li~~i~l~~~-~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 294 LKGAIFTAAFL-EKLGMNTSPAWNAPRTDLIQSVQFDDK-DRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHHHHH-HHHTCCEESCTTSCCSSSCCEEECCCH-HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHH-HhCcCEecCCCCCCCccEEEEEEeCCH-HHHHHHHHHHHhcC
Confidence 88889999999 66653211 11223445788888765 67888999998873
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.48 E-value=1.9e-12 Score=107.97 Aligned_cols=198 Identities=10% Similarity=0.003 Sum_probs=135.9
Q ss_pred CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEee--ccccCC
Q psy6548 18 SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILG--KALSGG 95 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~s--K~~~~g 95 (242)
.++++++|.+....+.+|.+.+. +++ +|+++++|.+++ +|.. +..++ ..|++++| |++| +
T Consensus 137 l~~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g~~--~id~~----~~d~~~~s~~K~~g-p 198 (361)
T 3m5u_A 137 FSDNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FFSR--KVDFS----NIALFYGGVQKNAG-I 198 (361)
T ss_dssp CCTTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TTSS--CCCCT----TEEEEEEETTTTSS-C
T ss_pred cCCCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cCCC--CCCcc----cCCEEEEechhccC-C
Confidence 35678888888777778976552 333 499999999996 3211 22222 24677766 9996 4
Q ss_pred ccchheeEeChhhhhccCC----CC--------CCCCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHH
Q psy6548 96 LYPISAVLADDEVMGTLVP----GT--------HGSTY-GGNPLACKLAMTALDVILEE----NMIENAYKMGEIFRSEL 158 (242)
Q Consensus 96 ~~~~g~~~~~~~~~~~l~~----~~--------~~~~~-~~~~~~~~~a~a~l~~~~~~----~~~~~~~~~~~~l~~~l 158 (242)
.++|+++.++++.+.+.+ .. ....+ +.+.....+..++++++.+. .+.++.+++.+++++.|
T Consensus 199 -~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L 277 (361)
T 3m5u_A 199 -SGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECI 277 (361)
T ss_dssp -TTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -CccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 568999999888766543 11 11222 34555666677788887654 35677888899999999
Q ss_pred HhhcCCC--CCCeE-eeeceeEEEEecC-CchhHHHHHHHHHHCCceeccCC--CCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 159 RSRLSPD--IVPVV-RGKGLLNAIVLDK-SILEVYDVCIKMKDAGLVTKPIS--NNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 159 ~~~l~~~--~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
++++.. ..... ......+.|.+++ ...+ .++.+.|.++||.+..+. .+.+|+++..++|++|++++++.|++
T Consensus 278 -~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~ 355 (361)
T 3m5u_A 278 -DLSNGFYKGHADKKDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKE 355 (361)
T ss_dssp -HTSTTSEEESSCGGGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred -HHCCCeeeccCCHHHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 766521 11111 1223467788876 2134 578899999999987652 25699999999999999999999998
Q ss_pred HHHH
Q psy6548 233 TINT 236 (242)
Q Consensus 233 ~l~~ 236 (242)
..++
T Consensus 356 ~~~~ 359 (361)
T 3m5u_A 356 FQGK 359 (361)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.44 E-value=8.5e-13 Score=119.95 Aligned_cols=207 Identities=13% Similarity=0.061 Sum_probs=128.3
Q ss_pred EEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCccc--ccccCCCCCCE------EE--eecccc
Q psy6548 24 AFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLL--AIHYEDVRPDI------VI--LGKALS 93 (242)
Q Consensus 24 ~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~--~~~~~~~~~~~------~~--~sK~~~ 93 (242)
+++++.+ +++|.+.+ +++|+++|++||+++++||+|.+....+..+ .....+...|+ ++ ++|+++
T Consensus 315 lvil~~p-n~~G~v~d----l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~ 389 (755)
T 2vyc_A 315 YCVVTNC-TYDGVCYN----AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN 389 (755)
T ss_dssp CEEEESS-CTTSEEEC----HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS
T ss_pred EEEEECC-CCCceecC----HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECcccccc
Confidence 5555554 56787765 9999999999999999999996421111110 00112200122 33 679987
Q ss_pred CCccchheeEeChh--hh--hccCCC-CCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhcCC-
Q psy6548 94 GGLYPISAVLADDE--VM--GTLVPG-THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELRSRLSP- 164 (242)
Q Consensus 94 ~g~~~~g~~~~~~~--~~--~~l~~~-~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~~~l~~- 164 (242)
|. ...|++..+++ .+ ..+... ....+.+.+.+.+++..++++.+.. +++.++..++.+++++.| +.++.
T Consensus 390 g~-~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L-~~l~~~ 467 (755)
T 2vyc_A 390 AL-SQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAM-ARLYKE 467 (755)
T ss_dssp CC-TTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred Cc-CCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-Hhcccc
Confidence 53 33566666443 11 111110 0122334566666666677776654 346788888888888888 54321
Q ss_pred --------C--C-CCeEee---------------------------------------ec------eeEEEEecCC----
Q psy6548 165 --------D--I-VPVVRG---------------------------------------KG------LLNAIVLDKS---- 184 (242)
Q Consensus 165 --------~--~-~~~~~~---------------------------------------~~------~~~~~~~~~~---- 184 (242)
- . ...... .+ ..+.+..+..
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G 547 (755)
T 2vyc_A 468 FTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDG 547 (755)
T ss_dssp HHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTS
T ss_pred ccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCC
Confidence 0 0 000000 11 2445555531
Q ss_pred -----chhHHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 185 -----ILEVYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 185 -----~~~~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
+..+..+.+.|.++||.+...+.+.+|++++...|+++++++++.|.+..+..
T Consensus 548 ~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 548 ELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp SBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred CccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 14457899999999999987788999999999999999999999999887654
No 230
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.43 E-value=1.8e-12 Score=110.02 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=115.4
Q ss_pred CChhh-hcCCCCCEEEEEEcc----cccCCCcccCCHHHHHHHHHHHHh--hCCEEEEeccccccCccCcccccccCCCC
Q psy6548 10 KQVPA-KLKSNPNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGKLLAIHYEDVR 82 (242)
Q Consensus 10 ~d~~~-~~~~~~~~~~i~~e~----~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~ 82 (242)
.|+++ +...++++++|++++ ++|++|.+.+ +++|+++|++ ||+++++|++|..+.....+. ...
T Consensus 147 ~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~-----~~g 217 (409)
T 3jzl_A 147 VDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPP-----EVG 217 (409)
T ss_dssp CCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSG-----GGT
T ss_pred cCHHHHHHhccCCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccccccCCcc-----ccC
Confidence 56777 444456899999999 9999997654 9999999999 999999999996432111111 123
Q ss_pred CCEEE--eeccccCCc-cchheeEeChhhhhccCCC--C--CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q psy6548 83 PDIVI--LGKALSGGL-YPISAVLADDEVMGTLVPG--T--HGSTYGGNPLACKLAMTALDVILEENMIENAYKMGEIFR 155 (242)
Q Consensus 83 ~~~~~--~sK~~~~g~-~~~g~~~~~~~~~~~l~~~--~--~~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~l~ 155 (242)
.|+++ ++|.++|+. ...||+++++++++.+... . .+...+.....+.++...++.+ +...++..+++.+++
T Consensus 218 ~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la 295 (409)
T 3jzl_A 218 ADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTA 295 (409)
T ss_dssp CSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred CeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHH
Confidence 56666 779999541 2358899999988887642 1 1112222221122233334332 345677888899999
Q ss_pred HHHHhhcCCCCCC--eEeeeceeEEEEecCCchhHHHHHHHHHHCCc
Q psy6548 156 SELRSRLSPDIVP--VVRGKGLLNAIVLDKSILEVYDVCIKMKDAGL 200 (242)
Q Consensus 156 ~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 200 (242)
+.| +.++..+.. ..+....++.+.+.+. .....|++.|.....
T Consensus 296 ~~L-~~~g~~v~p~~~~~~~~~i~~i~l~~~-~~~~~~~~~L~~~~~ 340 (409)
T 3jzl_A 296 AML-AEFGVEADPVWDAPRTDLIQSVSFHNK-EKMVAFAQAIQAASP 340 (409)
T ss_dssp HHH-HHTTCEEESCTTSCCSSSCCEEECSCH-HHHHHHHHHHHHTSS
T ss_pred HHH-HhCCCcccCCCCCCCccEEEEEEeCCH-HHHHHHHHHHHhcCc
Confidence 999 776632110 0112223778888754 678889999998743
No 231
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.38 E-value=8.3e-13 Score=112.54 Aligned_cols=174 Identities=10% Similarity=0.122 Sum_probs=113.7
Q ss_pred CChhh--hcCCC-CCEEEEEEcc----cccCCCcccCCHHHHHHHHHHHHh--hCCEEEEeccccccCccCcccccccCC
Q psy6548 10 KQVPA--KLKSN-PNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGKLLAIHYED 80 (242)
Q Consensus 10 ~d~~~--~~~~~-~~~~~i~~e~----~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~ 80 (242)
.|+++ +.+.+ +++++|++++ ++|++|.+.+ +++|+++|++ ||+++++|++|..+.....+. .
T Consensus 162 ~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~-----~ 232 (427)
T 3i16_A 162 PNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT-----D 232 (427)
T ss_dssp CCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG-----G
T ss_pred cCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCcc-----c
Confidence 46666 33443 6899999999 8899887653 9999999999 999999999996442112211 1
Q ss_pred CCCCEEE--eeccccCCc-cchheeEeChhhhhccCCC--CCCCCCCCCH-HHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Q psy6548 81 VRPDIVI--LGKALSGGL-YPISAVLADDEVMGTLVPG--THGSTYGGNP-LACKLAMTALDVILE-ENMIENAYKMGEI 153 (242)
Q Consensus 81 ~~~~~~~--~sK~~~~g~-~~~g~~~~~~~~~~~l~~~--~~~~~~~~~~-~~~~~a~a~l~~~~~-~~~~~~~~~~~~~ 153 (242)
...|+++ ++|.++|+. .+.|+++++++++++++.. ..+......+ +. +++.+++.+.. +...++..+++.+
T Consensus 233 ~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~ 310 (427)
T 3i16_A 233 VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFG--VVRSMYQGLFLAPHISMEALKGAIL 310 (427)
T ss_dssp GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346666 779999531 3468999999998887652 1111111111 21 12223333332 3467788889999
Q ss_pred HHHHHHhhcCCCCCCeEeeece-----eEEEEecCCchhHHHHHHHHHHCC
Q psy6548 154 FRSELRSRLSPDIVPVVRGKGL-----LNAIVLDKSILEVYDVCIKMKDAG 199 (242)
Q Consensus 154 l~~~l~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~g 199 (242)
+++.| +.++..+ .++.+. ++.+.+.+. ..+.+|++.|....
T Consensus 311 la~~L-~~~g~~V---~p~~~~~~~~~i~~i~l~~~-~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 311 CSRIM-ELAGFEV---MPKYDEKRSDIIQSIKFNDK-DKLIEFCKGIQTGS 356 (427)
T ss_dssp HHHHH-HHTTCEE---ESCTTSCCSSSCEEEECSSH-HHHHHHHHHHHHTC
T ss_pred HHHHH-HhCCCee---cCCCCCCCccEEEEEEECCH-HHHHHHHHHHhhcC
Confidence 99999 7766311 122233 788888765 67888999998873
No 232
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.32 E-value=1.8e-11 Score=104.37 Aligned_cols=176 Identities=14% Similarity=0.136 Sum_probs=112.3
Q ss_pred CChhh-h-cCCC-CCEEEEEEcc----cccCCCcccCCHHHHHHHHHHHHh--hCCEEEEeccccccCccCcccccccCC
Q psy6548 10 KQVPA-K-LKSN-PNICAFMVEP----IQGEAGAVVPDDGYLKKVRALCSQ--YNVLFIADEVQTGLGRTGKLLAIHYED 80 (242)
Q Consensus 10 ~d~~~-~-~~~~-~~~~~i~~e~----~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~ 80 (242)
.|+++ + .+.+ +++++|++++ ++|++|.+. .+++|+++|++ ||+++++|++|..+.....+. .
T Consensus 162 ~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~----dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~-----~ 232 (427)
T 3hvy_A 162 VDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIA----EIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT-----D 232 (427)
T ss_dssp CCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHH----HHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG-----G
T ss_pred cCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHH----HHHHHHHHHHHhCCCCEEEEECCccccccCCCCc-----c
Confidence 56676 3 3432 7899999999 888888665 39999999999 899999999996432122221 1
Q ss_pred CCCCEEE--eeccccCCc-cchheeEeChhhhhccCCC--CC--CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q psy6548 81 VRPDIVI--LGKALSGGL-YPISAVLADDEVMGTLVPG--TH--GSTYGGNPLACKLAMTALDVILEENMIENAYKMGEI 153 (242)
Q Consensus 81 ~~~~~~~--~sK~~~~g~-~~~g~~~~~~~~~~~l~~~--~~--~~~~~~~~~~~~~a~a~l~~~~~~~~~~~~~~~~~~ 153 (242)
...|+++ ++|+++|+. .+.|++++++++++.++.. .. +.+.+.++.....+...++.+ +...++..+++.+
T Consensus 233 ~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~ 310 (427)
T 3hvy_A 233 VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVF 310 (427)
T ss_dssp GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHH
Confidence 2346666 779999531 2458899999998887642 11 111122111122223333322 3466778889999
Q ss_pred HHHHHHhhcCCCCCCe--EeeeceeEEEEecCCchhHHHHHHHHHHC
Q psy6548 154 FRSELRSRLSPDIVPV--VRGKGLLNAIVLDKSILEVYDVCIKMKDA 198 (242)
Q Consensus 154 l~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 198 (242)
+++.| +.++..+... .+....++.+.+.+. ..+.+|++.|...
T Consensus 311 la~~L-~~~g~~V~p~~~~~~~~li~~~~l~~~-~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 311 CARIM-ELAGFDVLPKYNDKRTDIIQAIKFNDE-KKLIDFIKGIQTA 355 (427)
T ss_dssp HHHHH-HHTTCEEESCTTSCCSSSEEEEECSSH-HHHHHHHHHHHHT
T ss_pred HHHHH-HhCCCeecCCCCCCCceEEEEEeCCCH-HHHHHHHHHhccc
Confidence 99999 7766311100 111223788888755 6778899999876
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.22 E-value=2.8e-10 Score=96.27 Aligned_cols=213 Identities=10% Similarity=0.069 Sum_probs=126.9
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCC-CCCEEEee--ccccCCc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDV-RPDIVILG--KALSGGL 96 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~~~s--K~~~~g~ 96 (242)
+.+.+|+..+.+.- |..+.+ +++|+++|++||+++++||+|.........+....+.. ..|+++.| |.+...
T Consensus 215 ~~i~~V~~Ttt~y~-p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp- 289 (501)
T 3hl2_A 215 DCILCIHSTTSCFA-PRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP- 289 (501)
T ss_dssp GGEEEEEEECSCCT-TBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC-
T ss_pred CcEEEEEecCCCCC-Cccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee-
Confidence 45677777665542 323333 99999999999999999999954211111111111122 37888876 877633
Q ss_pred cchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHH-HHHh--ccHHHHHHHHHHHHHHHHHhhcCC---CCCCe
Q psy6548 97 YPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALD-VILE--ENMIENAYKMGEIFRSELRSRLSP---DIVPV 169 (242)
Q Consensus 97 ~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~-~~~~--~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~ 169 (242)
.+.+.+.. ++++++.+...+.+ +.+++ .++ ..+.++. +..+ .++.++..++.+++++.| +++.. .....
T Consensus 290 IGG~ii~~~d~e~l~~~~~~yPG-r~S~S-psl-dl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L-~~la~~~ge~ll~ 365 (501)
T 3hl2_A 290 VGGAIIAGFNDSFIQEISKMYPG-RASAS-PSL-DVLITLLSLGSNGYKKLLKERKEMFSYLSNQI-KKLSEAYNERLLH 365 (501)
T ss_dssp SSCEEEEESCHHHHHHHHHTSCS-CBCSH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTTCCBCC
T ss_pred cCceEEEeCCHHHHHHHHHhCCC-CCCCc-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcChhhcC
Confidence 33334433 45666666442221 22222 222 2233333 3333 456777788899999999 66532 11222
Q ss_pred EeeeceeEEEEecCCc----hhHHHHHHHHHHCCceec----cC--------------------CCCEEEEeccCcCCHH
Q psy6548 170 VRGKGLLNAIVLDKSI----LEVYDVCIKMKDAGLVTK----PI--------------------SNNIIRLSPALNITEQ 221 (242)
Q Consensus 170 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~~~----~~--------------------~~~~lR~~~~~~~t~e 221 (242)
.+....-+.+.+.... ....++...|+.++|--. ++ ...++-++.....+.+
T Consensus 366 ~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~ 445 (501)
T 3hl2_A 366 TPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQ 445 (501)
T ss_dssp CTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHH
T ss_pred CCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHH
Confidence 2333344455554321 347789999999865431 11 1357889888999999
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q psy6548 222 ELREGLDIIINTINTMAAKK 241 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~~~~~ 241 (242)
|++.++++|++++.++.+++
T Consensus 446 ~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 446 DVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999876643
No 234
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.20 E-value=2.1e-10 Score=97.61 Aligned_cols=212 Identities=9% Similarity=0.082 Sum_probs=120.7
Q ss_pred CCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCC-CCCCEEEee--ccccCCc
Q psy6548 20 PNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYED-VRPDIVILG--KALSGGL 96 (242)
Q Consensus 20 ~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~s--K~~~~g~ 96 (242)
+.+++|++.|.+...|.+-+ +++|+++|++||+++++|++|.........+....+. -..|.++.| |++...
T Consensus 197 ~~~~~Vv~t~t~~g~g~~dd----l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~- 271 (450)
T 3bc8_A 197 EHILCLHSTTACFAPRVPDR----LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP- 271 (450)
T ss_dssp GGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCC-
T ss_pred CCEEEEEEECCcCCCceecC----HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCch-
Confidence 36777888776655443333 9999999999999999999996421111111101111 146888766 988866
Q ss_pred cchheeEe-ChhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhhcC---CCCCCeE
Q psy6548 97 YPISAVLA-DDEVMGTLVPGTHGSTYGGNPLACKLAMTALDVILE--ENMIENAYKMGEIFRSELRSRLS---PDIVPVV 170 (242)
Q Consensus 97 ~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~a~l~~~~~--~~~~~~~~~~~~~l~~~l~~~l~---~~~~~~~ 170 (242)
...+++.. +++..+.+.....+ ..+.+ +++......+....+ .+..++..++.+++++.| +++. .......
T Consensus 272 ~~~~~l~~rd~~~~~~~~~~~~g-~~s~S-psL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l-~~~~~~~g~~~l~~ 348 (450)
T 3bc8_A 272 VGGAIIAGFNEPFIQDISKMYPG-RASAS-PSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQL-KKLAEAHNERLLQT 348 (450)
T ss_dssp SSCEEEEESCHHHHHHHHHHSCS-CBCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCCBCCC
T ss_pred hccEEEEecCHHHHHHHHHHhhc-CCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHhcCceecCC
Confidence 56676665 45555555432211 11222 233322222222221 223344466778888888 5544 2111111
Q ss_pred eeeceeEEEEecC-----CchhHHHHHHHHHHCCc---eec---------------------cCCCCEEEEeccCcCCHH
Q psy6548 171 RGKGLLNAIVLDK-----SILEVYDVCIKMKDAGL---VTK---------------------PISNNIIRLSPALNITEQ 221 (242)
Q Consensus 171 ~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi---~~~---------------------~~~~~~lR~~~~~~~t~e 221 (242)
+..+.-..+.+.. + .|...+.-.+...|+ -+. -.+..++-+..+...+++
T Consensus 349 ~~~~~~~~~~l~~~~~~~~-~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~ 427 (450)
T 3bc8_A 349 PHNPISLAMTLKTIDGHHD-KAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQ 427 (450)
T ss_dssp TTCSSEEEEECTTTSSSSS-CHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHH
T ss_pred ccCCCcceeeccccccccc-CCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHH
Confidence 1111112222221 2 466677777776652 211 124678888888999999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q psy6548 222 ELREGLDIIINTINTMAAK 240 (242)
Q Consensus 222 ~i~~~~~~l~~~l~~~~~~ 240 (242)
++++++++|+++..+.+++
T Consensus 428 di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 428 DVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999998877654
No 235
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.07 E-value=2e-09 Score=96.81 Aligned_cols=204 Identities=11% Similarity=0.020 Sum_probs=126.0
Q ss_pred EEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccc-ccc--CCCCCCEE---E--eeccccCC
Q psy6548 24 AFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLA-IHY--EDVRPDIV---I--LGKALSGG 95 (242)
Q Consensus 24 ~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~-~~~--~~~~~~~~---~--~sK~~~~g 95 (242)
++++..+ +++|.+.+ +++|+++|++++ +++||+|.+....+..+. ... .+..+|++ + ++|+++|.
T Consensus 300 ~vivt~p-n~~G~v~d----l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl 372 (715)
T 3n75_A 300 HAVITNS-TYDGLLYN----TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF 372 (715)
T ss_dssp EEEEESS-CTTSEEEC----HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC
T ss_pred EEEEECC-CCCCccCC----HHHHHHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC
Confidence 4555444 78897775 899999998764 799999964211121111 011 12124644 3 67998863
Q ss_pred ccchheeEeChhhh-hccCCC-CCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhcCC---CC-
Q psy6548 96 LYPISAVLADDEVM-GTLVPG-THGSTYGGNPLACKLAMTALDVILE---ENMIENAYKMGEIFRSELRSRLSP---DI- 166 (242)
Q Consensus 96 ~~~~g~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~~~a~a~l~~~~~---~~~~~~~~~~~~~l~~~l~~~l~~---~~- 166 (242)
...|++.++.++. +.+... ....+-+.+++.+++..++++.++. +++.+++.++.+++|+.| ++++. +.
T Consensus 373 -tqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L-~~i~~~~~~~~ 450 (715)
T 3n75_A 373 -SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEI-KRLRTESDGWF 450 (715)
T ss_dssp -TTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCC
T ss_pred -CCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH-HHhhhhcccce
Confidence 3467776654321 111111 1233445677777777778887753 457788899999999999 55431 00
Q ss_pred --CCeEe-----------------------e-----eceeEEEEecCC---------chhHHHHHHHHHHCCceeccCCC
Q psy6548 167 --VPVVR-----------------------G-----KGLLNAIVLDKS---------ILEVYDVCIKMKDAGLVTKPISN 207 (242)
Q Consensus 167 --~~~~~-----------------------~-----~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~ 207 (242)
.+... . .-.-+.+..+.- +..+.++.+.|.++||.+--.+.
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~ 530 (715)
T 3n75_A 451 FDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGP 530 (715)
T ss_dssp CEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEET
T ss_pred eeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCC
Confidence 00000 0 001123333321 13456888999999999988888
Q ss_pred CEEEEeccCcCCHHHHHHHHHHHHHHHHH
Q psy6548 208 NIIRLSPALNITEQELREGLDIIINTINT 236 (242)
Q Consensus 208 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 236 (242)
..+=+..+...|+++++++++.|.+.-+.
T Consensus 531 ~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 531 YNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999876553
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.98 E-value=1.1e-08 Score=86.29 Aligned_cols=207 Identities=16% Similarity=0.135 Sum_probs=130.8
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccc-cccCccCcc-cccccCCCCCCEEEee--c
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQ-TGLGRTGKL-LAIHYEDVRPDIVILG--K 90 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~-~~~~~~~~~~~~~~~s--K 90 (242)
+.+.+.++++|++-...-+ +..+ +++++++|++.|++|++|-+| +|+...|.. ..+ + ..|+++.+ |
T Consensus 197 ~~A~~~kPklIi~G~SaY~---r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~---~-~ADvVTtTTHK 266 (490)
T 3ou5_A 197 LTARLFRPRLIIAGTSAYA---RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---K-HADIVTTTTHK 266 (490)
T ss_dssp HHHHHHCCSEEEECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG---G-TCSEEEEESSS
T ss_pred HHHhhcCCCeEEECCccCc---cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcc---c-cceEEeccccc
Confidence 4455667888877663222 2332 999999999999999999999 776444421 112 2 25888855 9
Q ss_pred cccCCccchheeEeChh---------------hhhccCCCCCCCCCCCCHHHHHHHHH-HHHH-HHh--ccHHHHHHHHH
Q psy6548 91 ALSGGLYPISAVLADDE---------------VMGTLVPGTHGSTYGGNPLACKLAMT-ALDV-ILE--ENMIENAYKMG 151 (242)
Q Consensus 91 ~~~~g~~~~g~~~~~~~---------------~~~~l~~~~~~~~~~~~~~~~~~a~a-~l~~-~~~--~~~~~~~~~~~ 151 (242)
+|.|+ |.|.++++++ +.+.+....+.+..+++-.-..++.+ ++.. +.. .++.+++.+++
T Consensus 267 TLrGP--rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NA 344 (490)
T 3ou5_A 267 TLRGA--RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNA 344 (490)
T ss_dssp TTCSC--SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cccCC--CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 99974 6787877652 22222221122222233222222222 2332 322 35778888899
Q ss_pred HHHHHHHHhhcCCCCCCeEeeeceeEEEEecCCchhHHHHHHHHHHCCceec----cC-----CCCEEEEecc----CcC
Q psy6548 152 EIFRSELRSRLSPDIVPVVRGKGLLNAIVLDKSILEVYDVCIKMKDAGLVTK----PI-----SNNIIRLSPA----LNI 218 (242)
Q Consensus 152 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~----~~-----~~~~lR~~~~----~~~ 218 (242)
+.|.+.| ...+-.+.... ...+++++++...+.+..+..+.|.+.||.+. |. .++.||+.-+ ..+
T Consensus 345 kaLA~~L-~~~G~~vvsGg-TdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~ 422 (490)
T 3ou5_A 345 RAMADAL-LERGYSLVSGG-TDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQF 422 (490)
T ss_dssp HHHHHHH-HHTTCEEGGGS-CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTC
T ss_pred HHHHHHH-HhCCCeeecCC-CCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCC
Confidence 9999999 66664333221 23467788886654567778888889999985 22 3568999643 467
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy6548 219 TEQELREGLDIIINTIN 235 (242)
Q Consensus 219 t~e~i~~~~~~l~~~l~ 235 (242)
.++|++++.+.|.++++
T Consensus 423 ~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 423 REDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 88999999999988775
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=71.22 E-value=4.5 Score=30.19 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=29.9
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.-.++++++|-..+..|.... ++++.+++++||+.++.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 446788999988566675554 88899999999998874
No 238
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=67.56 E-value=6.3 Score=27.89 Aligned_cols=51 Identities=24% Similarity=0.214 Sum_probs=32.7
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHH-HHHHhhCCEE-EEecccc
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVR-ALCSQYNVLF-IADEVQT 65 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~-~l~~~~~~~l-i~De~~~ 65 (242)
+.+.+.++..+++.-+.++.|...+.....+..+ .+++++++.+ .+||-++
T Consensus 49 ~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 49 ELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp HHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 5566788888888877777776554433334444 4444567754 5899875
No 239
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=61.27 E-value=13 Score=27.87 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=27.9
Q ss_pred CCCEEEEEEccc-ccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 19 NPNICAFMVEPI-QGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 19 ~~~~~~i~~e~~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.-.++++++|-+ .+..|...- ++++.+++++||+.++.
T Consensus 156 Gl~Pa~vicEiv~~~~dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 156 GLQPAGAICEIVSQKDEGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp TSCSBEEEEEBBCSSSTTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEEeeeCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 345788888884 344564443 88889999999999884
No 240
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=53.93 E-value=19 Score=27.19 Aligned_cols=37 Identities=8% Similarity=0.180 Sum_probs=27.4
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.-.++++++|-. +..|.... +.++.+++++||+.+|.
T Consensus 165 Gl~Pa~vicEi~-~~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 165 GFKPAGVLCELT-NDDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp TSCSCEEEEEBB-CTTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEEe-CCCCCccC----HHHHHHHHHHcCCCEEE
Confidence 345777888866 44565444 88889999999999884
No 241
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=53.80 E-value=18 Score=27.51 Aligned_cols=37 Identities=11% Similarity=0.243 Sum_probs=28.4
Q ss_pred CCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 19 NPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.-+++++++|-.+. .|.... ++++.+++++||+.++.
T Consensus 176 Gl~Pa~VicEi~~d-dG~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 176 NLVPITTICEMMGD-DGNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp TSCSEEEEEEEBCT-TSSBCC----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 44678888888854 465444 88889999999999884
No 242
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=51.37 E-value=39 Score=20.65 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=31.7
Q ss_pred HHHHHHHHHHCCceeccCCCCEEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 188 VYDVCIKMKDAGLVTKPISNNIIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 188 ~~~~~~~l~~~gi~~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
..++.++..++| ..++|++...- +..+.+++...|-+++.++
T Consensus 33 lnelmdyikkqg-------akrvrisitar-tkkeaekfaailikvfael 74 (106)
T 1qys_A 33 LNELMDYIKKQG-------AKRVRISITAR-TKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp HHHHHHHHHHHC-------CSEEEEEEECS-SHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcC-------CcEEEEEEEec-chhHHHHHHHHHHHHHHHh
Confidence 345556666665 78899987755 8888999999988888765
No 243
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=49.72 E-value=11 Score=23.76 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
..-.+|++++++||++++.|...
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHH
Confidence 34788999999999999999755
No 244
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=46.89 E-value=16 Score=30.73 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=42.2
Q ss_pred CCCChhh---hcCCCCCEEEEEEcccccC------C-----C---------cccCCHHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 8 KSKQVPA---KLKSNPNICAFMVEPIQGE------A-----G---------AVVPDDGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 8 ~~~d~~~---~~~~~~~~~~i~~e~~~~~------~-----G---------~~~~~~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
+|+++.. .-+.+--.-+|-+.|++-. + | ...-+++.+++|++-|+++|+-||.|=|.
T Consensus 20 ~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 20 RWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp CHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4566655 3366667888999886432 1 1 12336778999999999999999999987
Q ss_pred c
Q psy6548 65 T 65 (242)
Q Consensus 65 ~ 65 (242)
.
T Consensus 100 N 100 (496)
T 4gqr_A 100 N 100 (496)
T ss_dssp S
T ss_pred C
Confidence 4
No 245
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=45.26 E-value=18 Score=27.82 Aligned_cols=20 Identities=15% Similarity=0.341 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhCCEEEEec
Q psy6548 43 YLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 43 ~l~~l~~l~~~~~~~li~De 62 (242)
..+++.++|++|++.+|+++
T Consensus 84 ~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 84 ACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHhhCCEEEEeC
Confidence 34789999999999998865
No 246
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=45.21 E-value=29 Score=21.50 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=31.0
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.++.++..++++-.. +++ +..+.+..+|++++++++.-..-.
T Consensus 21 kai~~gkaklViiA~D-------~~~-~~~~~i~~lc~~~~Ip~~~v~sk~ 63 (82)
T 3v7e_A 21 KALKRGSVKEVVVAKD-------ADP-ILTSSVVSLAEDQGISVSMVESMK 63 (82)
T ss_dssp HHHTTTCEEEEEEETT-------SCH-HHHHHHHHHHHHHTCCEEEESCHH
T ss_pred HHHHcCCeeEEEEeCC-------CCH-HHHHHHHHHHHHcCCCEEEECCHH
Confidence 5566778888887663 222 578899999999999988654433
No 247
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=43.81 E-value=17 Score=29.08 Aligned_cols=22 Identities=14% Similarity=0.175 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhhCCEEEEec
Q psy6548 41 DGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De 62 (242)
.+.+++++++|+++|+.+|+|=
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3678999999999999999984
No 248
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=43.50 E-value=15 Score=23.91 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
..-.+|++++++||++++.|...
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHH
Confidence 45788999999999999999765
No 249
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=42.49 E-value=16 Score=23.52 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
..-.+|+++++++|++++.|...
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHH
Confidence 35788999999999999999755
No 250
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=41.87 E-value=20 Score=28.30 Aligned_cols=23 Identities=13% Similarity=0.108 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhCCEEEEecc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEV 63 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~ 63 (242)
.+.++++++.|.++|+.+|+|=.
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46788999999999999999843
No 251
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=41.34 E-value=16 Score=23.71 Aligned_cols=23 Identities=26% Similarity=0.140 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
..-.+|++++++||++++.|...
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHH
Confidence 35788999999999999999754
No 252
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=39.25 E-value=37 Score=25.86 Aligned_cols=38 Identities=11% Similarity=0.133 Sum_probs=28.1
Q ss_pred CCCEEEEEEcccccC----------CCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 19 NPNICAFMVEPIQGE----------AGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~----------~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.-..+++++|-++.. .|...- ++++.+++++||+.++.
T Consensus 165 Gl~PagVicEi~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 165 GKRPVAVISEIVDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp TCCSBEEEEEBEECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEeCCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 446788888877541 464443 88889999999999884
No 253
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=39.04 E-value=24 Score=27.55 Aligned_cols=22 Identities=18% Similarity=0.075 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhCCEEEEecc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEV 63 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~ 63 (242)
+.++++++.|.++|+.+|+|-.
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 5788899999999999999843
No 254
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=38.94 E-value=25 Score=29.45 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.+.++++++-|+++|+-||.|=|+.
T Consensus 62 Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 62 GNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 356789999999999999999998874
No 255
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=38.22 E-value=44 Score=20.33 Aligned_cols=47 Identities=13% Similarity=0.025 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHCCceecc-CCCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 186 LEVYDVCIKMKDAGLVTKP-ISNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 186 ~~~~~~~~~l~~~gi~~~~-~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
.+++.+...|...|+-... .+....|+.+....+.++.+.+.+.|++
T Consensus 21 ~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 21 EQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 5677788888777753321 2345566665556677777877777765
No 256
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=37.72 E-value=25 Score=27.40 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhhCCEEEEecc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEV 63 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~ 63 (242)
+.++++.++|+++|+.+|.|-.
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 3578899999999999998753
No 257
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=37.65 E-value=26 Score=29.63 Aligned_cols=28 Identities=18% Similarity=0.061 Sum_probs=24.6
Q ss_pred cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 38 VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 38 ~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.-+.+.+++|++-|+++|+-||.|=|..
T Consensus 75 ~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 75 YGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3457889999999999999999998874
No 258
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=37.28 E-value=25 Score=27.49 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEec
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De 62 (242)
..+.++++++.|+++|+.+|+|=
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 45679999999999999999984
No 259
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=37.25 E-value=26 Score=27.44 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEec
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De 62 (242)
+.+.++++++.|+++|+.+|+|=
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999999983
No 260
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=37.03 E-value=39 Score=23.47 Aligned_cols=33 Identities=3% Similarity=0.018 Sum_probs=26.0
Q ss_pred CCCEEEEEEcccccCCCc-----ccCCHHHHHHHHHHHHh
Q psy6548 19 NPNICAFMVEPIQGEAGA-----VVPDDGYLKKVRALCSQ 53 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~G~-----~~~~~~~l~~l~~l~~~ 53 (242)
+.++.++++||. ++|+ ...+++.+++|.+++++
T Consensus 99 ~~e~~vLLiEp~--nTGd~~se~t~~~~~~i~~i~~~~~~ 136 (140)
T 3d0j_A 99 QKDTKMMYVQDS--NCSMDNSDFCDLSKEEIEYIQTNARK 136 (140)
T ss_dssp CTTCEEEEEEES--CCCGGGEEEEECCHHHHHHHHHHHHH
T ss_pred CCceEEEEEEeC--CCCCCCCccccCCHHHHHHHHHHHHH
Confidence 567889999998 4444 46788899999998765
No 261
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=36.80 E-value=25 Score=28.52 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEV 63 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~ 63 (242)
..+.++++++.|.++|+.+|+|=.
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 457799999999999999999743
No 262
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=36.67 E-value=26 Score=28.36 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhCCEEEEec
Q psy6548 42 GYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De 62 (242)
+.++++++.|.++|+.+|+|=
T Consensus 121 ~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 121 ELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 467899999999999999984
No 263
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=36.52 E-value=28 Score=29.47 Aligned_cols=28 Identities=11% Similarity=0.036 Sum_probs=24.6
Q ss_pred cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 38 VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 38 ~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
..+.+.+++|++-|+++|+-||.|=|..
T Consensus 79 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 79 YGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3467889999999999999999998874
No 264
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=36.18 E-value=27 Score=28.33 Aligned_cols=23 Identities=13% Similarity=0.023 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
+.++++++.|+++|+.+|+|-.+
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 46889999999999999998544
No 265
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=36.17 E-value=28 Score=27.06 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhhCCEEEEec
Q psy6548 42 GYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De 62 (242)
+.++++++.|.++|+.+|+|=
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 568889999999999999974
No 266
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=35.09 E-value=29 Score=28.81 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHhhCCEEEEec
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De 62 (242)
..++|+++++.|+++|+.+|+|=
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999999994
No 267
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=34.31 E-value=29 Score=27.27 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhCCEEEEec
Q psy6548 42 GYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De 62 (242)
+.++++++.|+++|+.+|+|-
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 568899999999999999984
No 268
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=34.28 E-value=33 Score=28.98 Aligned_cols=28 Identities=11% Similarity=0.072 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 38 VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 38 ~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
..+.+.+++|++-|+++|+-||.|=|..
T Consensus 77 ~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 77 YGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3457899999999999999999998874
No 269
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=34.28 E-value=34 Score=28.21 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=34.1
Q ss_pred CCCEEEEEEcccccCC---C-----------cccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 19 NPNICAFMVEPIQGEA---G-----------AVVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 19 ~~~~~~i~~e~~~~~~---G-----------~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+=.+-+|.+.|++... | ...-+.+.++++++-|+++|+-||.|=|..
T Consensus 32 ~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 32 AAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp HTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 3346677777764432 2 122346789999999999999999998875
No 270
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=33.85 E-value=35 Score=28.48 Aligned_cols=26 Identities=8% Similarity=0.043 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56889999999999999999998863
No 271
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=33.45 E-value=35 Score=29.25 Aligned_cols=28 Identities=11% Similarity=-0.045 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 38 VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 38 ~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.-+.+.++++++-|+++|+-||.|=|..
T Consensus 78 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 78 YGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3457899999999999999999998874
No 272
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=33.30 E-value=39 Score=15.42 Aligned_cols=14 Identities=21% Similarity=0.354 Sum_probs=7.9
Q ss_pred cHHHHHHHHHHHHH
Q psy6548 142 NMIENAYKMGEIFR 155 (242)
Q Consensus 142 ~~~~~~~~~~~~l~ 155 (242)
++.++++++++.++
T Consensus 12 dlqerlrklrkklr 25 (27)
T 3twe_A 12 DLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 34555666665554
No 273
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=33.29 E-value=35 Score=28.55 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||+|=+..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 56789999999999999999998863
No 274
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=33.28 E-value=36 Score=28.43 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 57889999999999999999998874
No 275
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=32.82 E-value=33 Score=27.25 Aligned_cols=22 Identities=23% Similarity=0.001 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhhCCEEEEec
Q psy6548 41 DGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De 62 (242)
-+.++++.+.|+++|+.+|+|=
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4678999999999999999884
No 276
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=32.74 E-value=33 Score=28.47 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
..+.++++++.|+++|+.+|+|=.+
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCC
Confidence 3468999999999999999998543
No 277
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.38 E-value=46 Score=27.46 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=20.0
Q ss_pred CcccCCHHHHHHHHHHHHhhCCEEEEecc
Q psy6548 35 GAVVPDDGYLKKVRALCSQYNVLFIADEV 63 (242)
Q Consensus 35 G~~~~~~~~l~~l~~l~~~~~~~li~De~ 63 (242)
+......+.+++|.++|+++|.-+|+|=.
T Consensus 67 ~~~~~~~~~~~~l~~~a~~~g~~vi~DVs 95 (385)
T 1x7f_A 67 RPKEEIVAEFKEIINHAKDNNMEVILDVA 95 (385)
T ss_dssp -------HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 33333447799999999999999999943
No 278
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=32.28 E-value=35 Score=26.79 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
+.++++++.|+++|+.+|+|=.+
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 46889999999999999999544
No 279
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=31.89 E-value=41 Score=21.82 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=17.1
Q ss_pred ccCCHHHHHHHHHHHHhhCC
Q psy6548 37 VVPDDGYLKKVRALCSQYNV 56 (242)
Q Consensus 37 ~~~~~~~l~~l~~l~~~~~~ 56 (242)
+.++++.++++.++|..|++
T Consensus 40 i~~~d~VldKc~ELC~~y~l 59 (101)
T 2keb_A 40 LDCEEALIEKLVELCVQYGQ 59 (101)
T ss_dssp CBCCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCC
Confidence 55677899999999999995
No 280
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=31.88 E-value=36 Score=27.51 Aligned_cols=24 Identities=13% Similarity=0.083 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
.++++++++.|.++|+.+|+|=.+
T Consensus 83 l~~ld~vV~~a~~~Gi~vIlDlH~ 106 (340)
T 3qr3_A 83 ISKYDQLVQGCLSLGAYCIVDIHN 106 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 457889999999999999999554
No 281
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=31.60 E-value=43 Score=27.52 Aligned_cols=61 Identities=11% Similarity=-0.015 Sum_probs=34.9
Q ss_pred cCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccccCccCcccccccCCCCCCEEEeecccc-CCccchhee
Q psy6548 32 GEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTGLGRTGKLLAIHYEDVRPDIVILGKALS-GGLYPISAV 102 (242)
Q Consensus 32 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~sK~~~-~g~~~~g~~ 102 (242)
.+-+....-.+.+++|.++|+++|.-+|+|=.-. .+...|+.++-+.+=|-+| .| +|+=+-
T Consensus 40 ~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~---------~l~~Lg~s~~dl~~~~~lGi~g-lRLD~G 101 (372)
T 2p0o_A 40 IPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE---------ALKRAGFSFDELEPLIELGVTG-LRMDYG 101 (372)
T ss_dssp CC-----CHHHHHHHHHHHHHHHTCEEEEEECHH---------HHHTTTCBTTBCHHHHHHTCCE-EEECSS
T ss_pred ccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH---------HHHHcCCCHHHHHHHHHcCCCE-EEEcCC
Confidence 3333333345779999999999999999994322 2344455555444444445 44 554443
No 282
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=31.41 E-value=33 Score=28.98 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=36.0
Q ss_pred CCCCCEEEEEEcccccCCC---------c---------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 17 KSNPNICAFMVEPIQGEAG---------A---------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 17 ~~~~~~~~i~~e~~~~~~G---------~---------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+++=.+-+|.+.|++.... + ...+.+.++++++-|+++|+-||.|=|..
T Consensus 32 L~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 32 LQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp TTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3455678888888654332 1 12346789999999999999999998874
No 283
>3bww_A Protein of unknown function DUF692/COG3220; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.20A {Haemophilus somnus}
Probab=31.15 E-value=33 Score=27.30 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=31.0
Q ss_pred EEEcc-cccCCCcccCCHHHHHHHHHHHHhhCCEEEEec
Q psy6548 25 FMVEP-IQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 25 i~~e~-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De 62 (242)
+++=+ ..|-||.-.++.++++++.+++++++...++|-
T Consensus 57 l~~HGv~LSlG~~~pld~~~L~~lk~l~~~~~~~~~SeH 95 (307)
T 3bww_A 57 ILIHGLSLSLGGQAPLDKELLSSIKAMIKQYNTPFFSDH 95 (307)
T ss_dssp EEEBCSCCCTTCSSCCCHHHHHHHHHHHHHTTCCCCEEC
T ss_pred EEEeeccccccCCCCCCHHHHHHHHHHHHHHCCCEEEee
Confidence 33444 356677788899999999999999999999994
No 284
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=30.99 E-value=40 Score=28.39 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.+.++++++-|+++|+-||.|=|..
T Consensus 95 Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 95 GTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 457889999999999999999998874
No 285
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=30.36 E-value=42 Score=28.23 Aligned_cols=45 Identities=16% Similarity=0.235 Sum_probs=32.5
Q ss_pred CEEEEEEcccccCC---Cc----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 21 NICAFMVEPIQGEA---GA----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 21 ~~~~i~~e~~~~~~---G~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+-+|.+.|++... |+ ...+.+.++++++-|+++|+-||.|=|..
T Consensus 63 Gv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 120 (475)
T 2z1k_A 63 GVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFN 120 (475)
T ss_dssp TCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 35567777764321 21 12357889999999999999999998874
No 286
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=30.09 E-value=64 Score=24.11 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=15.5
Q ss_pred EEEEcccccCCCcccCCHHHHHHHHHHHHhh-CCEEEEe
Q psy6548 24 AFMVEPIQGEAGAVVPDDGYLKKVRALCSQY-NVLFIAD 61 (242)
Q Consensus 24 ~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~D 61 (242)
.+++.++++.+|........++.+.++.+.. ++.+++|
T Consensus 141 ~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~ 179 (228)
T 1h1y_A 141 LVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVD 179 (228)
T ss_dssp EEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEE
T ss_pred EEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 4444444432222223333444444444443 4444444
No 287
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=30.06 E-value=40 Score=28.47 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.+.++++++-|+++|+-||.|=|..
T Consensus 95 Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 95 GTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 356889999999999999999998874
No 288
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=30.02 E-value=39 Score=27.41 Aligned_cols=23 Identities=9% Similarity=0.024 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
++++++++.|.++|+.+|+|=.+
T Consensus 91 ~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 91 MRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEEECCC
Confidence 56799999999999999999554
No 289
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=29.82 E-value=43 Score=28.76 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.+.++++++-|+++|+-||.|=|..
T Consensus 90 Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 90 GSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 457889999999999999999998875
No 290
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=29.80 E-value=40 Score=26.82 Aligned_cols=23 Identities=22% Similarity=0.569 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
+.++++++.|+++|+.+|+|=.+
T Consensus 69 ~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 69 SYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEecC
Confidence 56889999999999999999554
No 291
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=29.69 E-value=33 Score=23.08 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=26.6
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEe
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 61 (242)
+.++.++..++++-.- +++.+....+..+|+++|++++.-
T Consensus 30 kai~~gkakLViiA~D-------~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 30 KALRKGEKGLVVIAGD-------IWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHSCCCEEEECTT-------CSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHcCCceEEEEeCC-------CCHHHHHHHHHHHHHhcCCcEEEE
Confidence 3444566777777653 222245778889999999998643
No 292
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=29.66 E-value=44 Score=28.26 Aligned_cols=48 Identities=15% Similarity=0.083 Sum_probs=34.8
Q ss_pred CCCCEEEEEEcccccCC---Cc----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 18 SNPNICAFMVEPIQGEA---GA----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~---G~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
++=.+-+|.+.|++... |+ ...+.+.+++|++-|+++|+-||.|=|..
T Consensus 45 ~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 105 (488)
T 1wza_A 45 ADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPIN 105 (488)
T ss_dssp SSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred hhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 34456678888865432 21 12356889999999999999999998874
No 293
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=29.03 E-value=1.1e+02 Score=20.86 Aligned_cols=36 Identities=8% Similarity=-0.060 Sum_probs=29.6
Q ss_pred CCCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhhc
Q psy6548 206 SNNIIRLSPALNITEQELREGLDIIINTINTMAAKK 241 (242)
Q Consensus 206 ~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 241 (242)
.-.++++..+...+.++.+.+++.+.+.+.++-.++
T Consensus 21 ~MP~i~i~tnv~~~~~~~~~l~~~ls~~la~~lgKP 56 (135)
T 3t5s_A 21 SMPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKP 56 (135)
T ss_dssp CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCSC
T ss_pred CcceEEEEecCccchhccchhHHHHHHHHHHhhCCc
Confidence 356899988888888888999999999998876654
No 294
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=35.16 E-value=12 Score=23.82 Aligned_cols=22 Identities=9% Similarity=0.274 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhCCEEEEecccc
Q psy6548 44 LKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 44 l~~l~~l~~~~~~~li~De~~~ 65 (242)
-.+|++++++||++++.|....
T Consensus 29 A~~I~e~A~e~~VPi~e~~~LA 50 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPELA 50 (87)
Confidence 5678899999999999997653
No 295
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=28.96 E-value=43 Score=26.42 Aligned_cols=24 Identities=13% Similarity=0.124 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
-+.++++++.|+++|+.+|+|=.+
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467899999999999999998543
No 296
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=28.92 E-value=42 Score=26.69 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhhCCEEEEec
Q psy6548 42 GYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De 62 (242)
+.++++.++|+++|+.+|+|=
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEc
Confidence 468999999999999999863
No 297
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=28.92 E-value=42 Score=26.85 Aligned_cols=24 Identities=21% Similarity=0.213 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
.+.++++++.|+++|+.+|+|=.+
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999998543
No 298
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=28.89 E-value=45 Score=28.46 Aligned_cols=26 Identities=8% Similarity=0.100 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|+.
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 56789999999999999999998873
No 299
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=28.63 E-value=57 Score=24.28 Aligned_cols=40 Identities=5% Similarity=0.121 Sum_probs=26.1
Q ss_pred CCEEEEEEcccccC---CCcc-cCCHHHHHHHHHHHHhhCCEEE
Q psy6548 20 PNICAFMVEPIQGE---AGAV-VPDDGYLKKVRALCSQYNVLFI 59 (242)
Q Consensus 20 ~~~~~i~~e~~~~~---~G~~-~~~~~~l~~l~~l~~~~~~~li 59 (242)
.....|++.|+... .|.. ....++-+.+.++|+++|+.+|
T Consensus 124 ~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 124 KGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp TTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 34567777775332 1321 2344677889999999997776
No 300
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=28.53 E-value=38 Score=28.11 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~N 98 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVIN 98 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 56789999999999999999998874
No 301
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=28.45 E-value=34 Score=23.22 Aligned_cols=24 Identities=13% Similarity=0.164 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhhCCEEEEecccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
..-.+|.+++++||++++.|....
T Consensus 71 ~~A~~I~~~A~e~~VPi~e~~~LA 94 (123)
T 2jli_A 71 AQVQTVRKIAEEEGVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 457889999999999999997553
No 302
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=28.43 E-value=17 Score=26.91 Aligned_cols=15 Identities=27% Similarity=0.326 Sum_probs=12.7
Q ss_pred HHhhCCEEEEecccc
Q psy6548 51 CSQYNVLFIADEVQT 65 (242)
Q Consensus 51 ~~~~~~~li~De~~~ 65 (242)
+...+.+||+||+|.
T Consensus 84 ~~~~~~vliIDEAq~ 98 (199)
T 2r2a_A 84 PENIGSIVIVDEAQD 98 (199)
T ss_dssp GGGTTCEEEETTGGG
T ss_pred cccCceEEEEEChhh
Confidence 455699999999997
No 303
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=28.25 E-value=76 Score=21.72 Aligned_cols=38 Identities=8% Similarity=0.050 Sum_probs=25.6
Q ss_pred cCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 16 LKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 16 ~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
.++.++..++++-.- ..+.+..+.+..+|++++++++.
T Consensus 52 al~~gkaklViiA~D-------~~~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 52 ALNRGIAEIVLLAAD-------AEPLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHTTCEEEEEEETT-------CSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHcCCCeEEEEecC-------CChHHHHhHHHHHHHhcCCcEEE
Confidence 334567777777652 22334468899999999998763
No 304
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=28.04 E-value=39 Score=27.17 Aligned_cols=24 Identities=4% Similarity=0.050 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
.+.++++++.|.++|+.+|+|=.+
T Consensus 82 l~~l~~~v~~a~~~Gi~vildlH~ 105 (345)
T 3ndz_A 82 MKRVEEIANYAFDNDMYVIINLHH 105 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEECCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 367899999999999999998544
No 305
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=28.00 E-value=1.2e+02 Score=19.49 Aligned_cols=58 Identities=9% Similarity=0.067 Sum_probs=41.5
Q ss_pred eceeEEEEecCCc-hhHHHHHHHHHHCCceeccC---------CCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 173 KGLLNAIVLDKSI-LEVYDVCIKMKDAGLVTKPI---------SNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~~---------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
..+++.|.+.+.+ .+..++-..|...|....-. +.+.+=+. ...++++++++++.+.+
T Consensus 10 ~~YVVTf~y~e~~Lt~~~eL~~~lt~aGF~ttl~D~~G~pHeLgtNsFgli--S~l~~~ev~~La~~L~e 77 (100)
T 2llz_A 10 NTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAIT--TSLAASEIEDLIRLKCL 77 (100)
T ss_dssp CCEEEEEECCGGGHHHHHHHHHHHHHTTEESEEECSSSCEEECTTTEEEEC--CCSCHHHHHHHHHHGGG
T ss_pred eEEEEEEEecccchHHHHHHHHHHHhCCceeEeecCCCCceeccccceeee--ccCCHHHHHHHHHHHHH
Confidence 3467788887764 44567888888999887532 44545444 67899999999888754
No 306
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=27.72 E-value=1.1e+02 Score=20.67 Aligned_cols=35 Identities=6% Similarity=-0.073 Sum_probs=28.7
Q ss_pred CCEEEEeccCcCCHHHHHHHHHHHHHHHHHHhhhc
Q psy6548 207 NNIIRLSPALNITEQELREGLDIIINTINTMAAKK 241 (242)
Q Consensus 207 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~~~ 241 (242)
-.++++..+...+.++.+.+++.+.+.+.+.-.++
T Consensus 21 MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKP 55 (133)
T 3fwt_A 21 MPFLQTIVSVSLDDQKRANLSAAYGMICREELGKP 55 (133)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 35788888888888888999999999988876654
No 307
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=27.64 E-value=44 Score=28.23 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEec
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De 62 (242)
..+.++++++.|.++|+.+|+|=
T Consensus 70 ~l~~ld~vv~~a~~~Gl~VIlDl 92 (464)
T 1wky_A 70 DIQTVRNLISLAEDNNLVAVLEV 92 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35679999999999999999984
No 308
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=27.62 E-value=48 Score=28.67 Aligned_cols=26 Identities=15% Similarity=0.070 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 56789999999999999999998874
No 309
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=27.25 E-value=49 Score=28.74 Aligned_cols=26 Identities=15% Similarity=0.079 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|..
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 56789999999999999999998874
No 310
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.23 E-value=41 Score=23.78 Aligned_cols=44 Identities=20% Similarity=0.199 Sum_probs=33.1
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEe
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 61 (242)
..+.++++-+|+..+- |.+ ..+....-..|+..|-.|+++++..
T Consensus 76 d~I~~geIdlVInt~~--pl~-~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 76 ALISEGKIDVLIFFWD--PLN-AVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp HHHHTTCCCEEEEECC--TTS-CCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred HHHHCCCccEEEEcCC--ccc-CCcccccHHHHHHHHHHcCCCEEeC
Confidence 6777889999888773 112 3343567899999999999999854
No 311
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=27.13 E-value=49 Score=28.59 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|..
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 56789999999999999999998874
No 312
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=27.10 E-value=1e+02 Score=18.33 Aligned_cols=47 Identities=4% Similarity=0.013 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHCCceecc-CCCCEEEEeccCcCCHHHHHHHHHHHHH
Q psy6548 186 LEVYDVCIKMKDAGLVTKP-ISNNIIRLSPALNITEQELREGLDIIIN 232 (242)
Q Consensus 186 ~~~~~~~~~l~~~gi~~~~-~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 232 (242)
.+++.+...|...|+-... .+....|+.+....+.++.+.+.+.|++
T Consensus 21 ~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 21 ANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 6788888888887753321 2345667766566788899999888876
No 313
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=27.07 E-value=37 Score=23.55 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhhCCEEEEecccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
..-.+|.+++++||++++.|....
T Consensus 81 ~~A~~I~e~A~e~gVPi~e~~~LA 104 (137)
T 3bzs_A 81 AKALQIIKLAELYDIPVIEDIPLA 104 (137)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 357889999999999999997653
No 314
>3vej_A Ubiquitin-like protein MDY2; alpha helical, dimerization, homodimerization, protein bindi; 1.23A {Saccharomyces cerevisiae}
Probab=26.99 E-value=3.7 Score=21.96 Aligned_cols=11 Identities=18% Similarity=0.271 Sum_probs=8.5
Q ss_pred ccccCCCChhh
Q psy6548 4 QFPVKSKQVPA 14 (242)
Q Consensus 4 ~~~~~~~d~~~ 14 (242)
.+.+||+++++
T Consensus 3 ~l~VPWd~Ie~ 13 (41)
T 3vej_A 3 DLTVPWDDIEA 13 (41)
T ss_dssp CTTSCHHHHHH
T ss_pred eeecCHHHHHH
Confidence 45788888887
No 315
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=26.77 E-value=68 Score=28.04 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=33.7
Q ss_pred CEEEEEEcccccCC-------Cc----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 21 NICAFMVEPIQGEA-------GA----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 21 ~~~~i~~e~~~~~~-------G~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+-+|.+.|++... |+ ..-+.+.+++|++-|+++|+-||.|=|..
T Consensus 161 Gv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 161 GFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp TCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 46678888875321 11 12456789999999999999999998874
No 316
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=26.76 E-value=19 Score=21.35 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhCCEEEEecccccc
Q psy6548 44 LKKVRALCSQYNVLFIADEVQTGL 67 (242)
Q Consensus 44 l~~l~~l~~~~~~~li~De~~~~~ 67 (242)
+.||++.++..|..+|-|..-..|
T Consensus 37 L~ELiKFAksrgtFvId~~lA~EF 60 (75)
T 2kxe_A 37 LIELIKFAKSRETFIIDDEIANEF 60 (75)
T ss_dssp HHHHHHHHHHHTCSEECHHHHHHH
T ss_pred HHHHHHHHHhcCcEEechHHHHHH
Confidence 789999999999988877665543
No 317
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=26.70 E-value=50 Score=29.45 Aligned_cols=27 Identities=7% Similarity=0.007 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.+.+++|++-|+++|+-||.|=|..
T Consensus 109 Gt~~df~~Lv~~aH~~GIkVilD~V~N 135 (680)
T 1cyg_A 109 GTLSDFQRLVDAAHAKGIKVIIDFAPN 135 (680)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457889999999999999999998763
No 318
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=26.62 E-value=48 Score=26.35 Aligned_cols=24 Identities=8% Similarity=0.030 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
.+.++++++.|+++|+.+|+|=.+
T Consensus 76 ~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 76 FEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEecC
Confidence 457889999999999999998544
No 319
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=26.62 E-value=46 Score=27.08 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhCCEEEEeccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~ 64 (242)
+.++++++.|+++|+.+|+|=.+
T Consensus 101 ~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 101 NRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEEeCCC
Confidence 56889999999999999999544
No 320
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=26.61 E-value=50 Score=29.47 Aligned_cols=27 Identities=15% Similarity=0.058 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.+.+++|++-|+++|+-||.|=|..
T Consensus 113 Gt~~dfk~Lv~~aH~~GI~VilD~V~N 139 (686)
T 1d3c_A 113 GTIADFQNLIAAAHAKNIKVIIDFAPN 139 (686)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCcC
Confidence 357889999999999999999998774
No 321
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.60 E-value=88 Score=17.29 Aligned_cols=32 Identities=6% Similarity=0.214 Sum_probs=24.3
Q ss_pred CEEEEeccCcCCHHHHHHHHHHHHHHHHHHhh
Q psy6548 208 NIIRLSPALNITEQELREGLDIIINTINTMAA 239 (242)
Q Consensus 208 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 239 (242)
.++++......+.++-.++.+.+-+++.+...
T Consensus 4 P~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg 35 (63)
T 2x4k_A 4 PIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTG 35 (63)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 35677655566899999999999988887543
No 322
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=26.48 E-value=1.1e+02 Score=23.23 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=26.8
Q ss_pred EEEEcccccCCCcccC-------------CHHHHHHHHHHHHhhCCEEEE
Q psy6548 24 AFMVEPIQGEAGAVVP-------------DDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 24 ~i~~e~~~~~~G~~~~-------------~~~~l~~l~~l~~~~~~~li~ 60 (242)
=+++-|-...+|.... +.+.++.+.++++++++.+++
T Consensus 36 dlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~ 85 (262)
T 3ivz_A 36 QLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVA 85 (262)
T ss_dssp SEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEE
T ss_pred CEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEE
Confidence 3566676666665432 236789999999999998875
No 323
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=26.48 E-value=46 Score=27.05 Aligned_cols=24 Identities=8% Similarity=-0.040 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
.++++++++.|.++|+.+|+|=.+
T Consensus 102 l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 102 LKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 357899999999999999998544
No 324
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=26.12 E-value=58 Score=27.08 Aligned_cols=26 Identities=8% Similarity=0.056 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|+.
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46789999999999999999998875
No 325
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=26.07 E-value=46 Score=28.52 Aligned_cols=24 Identities=4% Similarity=0.090 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhCCEEEEecccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
++++++++.|+++|+.+|+|=.+.
T Consensus 86 ~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 86 KRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHCCCEEEEecCCC
Confidence 679999999999999999986543
No 326
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=26.05 E-value=52 Score=25.76 Aligned_cols=24 Identities=4% Similarity=-0.100 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhCCEEEEeccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQ 64 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~ 64 (242)
-+.++++++.|+++|+.+|+|=.+
T Consensus 73 ~~~~d~~v~~a~~~Gi~vild~h~ 96 (317)
T 3aof_A 73 FKRVDEVINGALKRGLAVVINIHH 96 (317)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 356889999999999999998543
No 327
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=25.79 E-value=51 Score=28.41 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~N 102 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVVN 102 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 56789999999999999999998864
No 328
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=25.76 E-value=65 Score=28.07 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.+.++++++-|+++|+-||.|=|+.
T Consensus 217 Gt~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 217 GDLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 356889999999999999999998774
No 329
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=25.57 E-value=50 Score=28.11 Aligned_cols=21 Identities=5% Similarity=0.124 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhhCCEEEEe
Q psy6548 41 DGYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~D 61 (242)
.+.++++++.|.++|+.+|+|
T Consensus 79 l~~ld~vv~~a~~~Gl~VIlD 99 (491)
T 2y8k_A 79 VNEIDKIVERTRELGLYLVIT 99 (491)
T ss_dssp HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 468999999999999999999
No 330
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=25.57 E-value=54 Score=29.11 Aligned_cols=26 Identities=12% Similarity=0.001 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|+.
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~N 265 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVLN 265 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 35789999999999999999998875
No 331
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=25.49 E-value=58 Score=21.32 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=26.1
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEE
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFI 59 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li 59 (242)
+.++.++..++++-.- . +++..+.+..+|++++++++
T Consensus 31 kai~~gka~lViiA~D-------~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 31 KFVKHGEGKLVVLAGN-------I-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHTTCCSEEEECTT-------C-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHcCCceEEEEeCC-------C-CHHHHHHHHHHHHHcCCCEE
Confidence 3445666777776552 2 34678999999999999865
No 332
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=25.34 E-value=41 Score=23.53 Aligned_cols=24 Identities=13% Similarity=0.164 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhCCEEEEecccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
..-.+|.++|++||++++.|....
T Consensus 80 ~~A~~I~e~A~e~gVPi~e~~~LA 103 (144)
T 2jlj_A 80 AQVQTVRKIAEEEGVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 457889999999999999997553
No 333
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=25.28 E-value=45 Score=28.22 Aligned_cols=45 Identities=22% Similarity=0.212 Sum_probs=32.3
Q ss_pred CEEEEEEcccccCC---Ccc----------cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 21 NICAFMVEPIQGEA---GAV----------VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 21 ~~~~i~~e~~~~~~---G~~----------~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+-+|.+.|++... |+- ..+.+.+++|++-|+++|+-||.|=|..
T Consensus 69 Gv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 126 (488)
T 2wc7_A 69 GINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFN 126 (488)
T ss_dssp TCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45677777764321 211 2246789999999999999999998764
No 334
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=25.23 E-value=93 Score=17.10 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=22.1
Q ss_pred EEEEeccCcCCHHHHHHHHHHHHHHHHHH
Q psy6548 209 IIRLSPALNITEQELREGLDIIINTINTM 237 (242)
Q Consensus 209 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 237 (242)
.+|++...- |..+.+++...|-+++.++
T Consensus 3 rvrisitar-tkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITAR-TKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECS-SHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEec-chhHHHHHHHHHHHHHHHh
Confidence 578876654 8888899999988888765
No 335
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=25.11 E-value=54 Score=26.41 Aligned_cols=20 Identities=20% Similarity=0.215 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhhCCEEEEe
Q psy6548 42 GYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~D 61 (242)
+.++++++.|+++|+.+|+|
T Consensus 85 ~~ld~~i~~a~~~Gi~vil~ 104 (373)
T 1rh9_A 85 QGLDFVISEAKKYGIHLIMS 104 (373)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 46788999999999999997
No 336
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=24.79 E-value=52 Score=21.88 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=27.3
Q ss_pred hcCCCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEe
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 61 (242)
+.++.++..++++-.--+ +.+....+-.+|+++|++++.-
T Consensus 35 kaI~~gka~LVvIA~D~~-------p~~i~~~l~~lC~~~~VP~~~v 74 (113)
T 3jyw_G 35 ALIENKKAKLVLIANDVD-------PIELVVFLPALCKKMGVPYAIV 74 (113)
T ss_dssp HTTTTTCCSEEEECSCCS-------SHHHHTTHHHHHHHTTCCCEEC
T ss_pred HHHHcCCceEEEEeCCCC-------HHHHHHHHHHHHHHcCCCEEEE
Confidence 556677777877766322 2244566789999999977643
No 337
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=24.68 E-value=60 Score=28.48 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.+.++++++-|+++|+-||.|=|..
T Consensus 206 Gt~~dfk~Lv~~aH~~GI~VilD~V~N 232 (599)
T 3bc9_A 206 GTKGELENAIDALHNNDIKVYFDAVLN 232 (599)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 456889999999999999999998874
No 338
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=24.41 E-value=55 Score=27.68 Aligned_cols=20 Identities=5% Similarity=-0.009 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhCCEEEEec
Q psy6548 43 YLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 43 ~l~~l~~l~~~~~~~li~De 62 (242)
.++++++.|+++|+.+|+|=
T Consensus 106 ~l~~~v~~a~~~Gi~vildl 125 (481)
T 2osx_A 106 RVEDRVGWYAERGYKVMLDM 125 (481)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEc
Confidence 45668899999999999993
No 339
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=24.41 E-value=88 Score=17.84 Aligned_cols=19 Identities=11% Similarity=0.275 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy6548 218 ITEQELREGLDIIINTINT 236 (242)
Q Consensus 218 ~t~e~i~~~~~~l~~~l~~ 236 (242)
.++|+.+..+++|.++++.
T Consensus 5 lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHc
Confidence 4788999999999998864
No 340
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=24.32 E-value=61 Score=28.25 Aligned_cols=44 Identities=20% Similarity=0.263 Sum_probs=32.3
Q ss_pred EEEEEEcccccCC---Cc----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 22 ICAFMVEPIQGEA---GA----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 22 ~~~i~~e~~~~~~---G~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+-+|.+.|++... |+ ...+.+.++++++-|+++|+-||.|=|+.
T Consensus 190 vt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 190 ITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp CCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 5677777763211 21 12346889999999999999999998874
No 341
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=24.22 E-value=1.1e+02 Score=17.45 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=23.9
Q ss_pred EEEEeccCcCCHHHHHHHHHHHHHHHHHHh
Q psy6548 209 IIRLSPALNITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 209 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
++++.+....|.|+-.++.+.+-+++.+..
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~l 31 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHETL 31 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 567766566799999999999999888753
No 342
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=24.11 E-value=62 Score=27.95 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.+++|++-|+++|+-||.|=|..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 56789999999999999999998874
No 343
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=24.10 E-value=56 Score=14.75 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=13.9
Q ss_pred ccCCHHHHHHHHHHHHhh
Q psy6548 37 VVPDDGYLKKVRALCSQY 54 (242)
Q Consensus 37 ~~~~~~~l~~l~~l~~~~ 54 (242)
.+|+-+|-.+++++.++.
T Consensus 3 ripsydfadelakllrqa 20 (26)
T 1sn9_A 3 RIPSYDFADELAKLLRQA 20 (26)
T ss_dssp CBTTBCHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHh
Confidence 466777888999988764
No 344
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=24.01 E-value=41 Score=25.75 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=29.6
Q ss_pred hcCCCCCEEEEEEcccccCCCccc-----------CCHHHHHHHHHHHHhhCCEEEE-ec
Q psy6548 15 KLKSNPNICAFMVEPIQGEAGAVV-----------PDDGYLKKVRALCSQYNVLFIA-DE 62 (242)
Q Consensus 15 ~~~~~~~~~~i~~e~~~~~~G~~~-----------~~~~~l~~l~~l~~~~~~~li~-De 62 (242)
+.+.++.+-+|+++|+++.+.... ...++++++.++.+..|.+++. |+
T Consensus 17 ~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 17 DQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp HHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred HhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 556677899999999998752111 1123445555555556766665 54
No 345
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=23.87 E-value=1.1e+02 Score=23.55 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=27.2
Q ss_pred EEEEcccccCCCcccC---------CHHHHHHHHHHHHhhCCEEEE
Q psy6548 24 AFMVEPIQGEAGAVVP---------DDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 24 ~i~~e~~~~~~G~~~~---------~~~~l~~l~~l~~~~~~~li~ 60 (242)
=+++-|-...+|.... +.+.++.+.++|+++++.+++
T Consensus 55 dlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~ 100 (281)
T 3p8k_A 55 DVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVA 100 (281)
T ss_dssp CEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEE
Confidence 3667776666665432 356899999999999998764
No 346
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=23.83 E-value=62 Score=28.55 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=24.4
Q ss_pred cCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 38 VPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 38 ~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.-+.+.+++|++-|+++|+-||.|=|..
T Consensus 282 ~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 282 LGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 3467789999999999999999998863
No 347
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=23.74 E-value=83 Score=25.37 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=31.3
Q ss_pred CEEEEEEcccccCCCcc------cCCHHHHHHHHHHHHhhCCEEEEe
Q psy6548 21 NICAFMVEPIQGEAGAV------VPDDGYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~------~~~~~~l~~l~~l~~~~~~~li~D 61 (242)
.+.+|++++.+.+.+.. .--.+..+.|..+|+++|+++|.=
T Consensus 156 g~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 156 ELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp TEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 79999999988776522 122356788899999999988863
No 348
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=23.49 E-value=82 Score=27.76 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHhhCCEEEEeccccccC
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQTGLG 68 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~~~~ 68 (242)
+.+.++++++-|+++|+-||.|=|+.-++
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 45789999999999999999999885443
No 349
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=23.43 E-value=44 Score=22.99 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=22.8
Q ss_pred CCCCEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEE
Q psy6548 18 SNPNICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIA 60 (242)
Q Consensus 18 ~~~~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 60 (242)
+.++..+|++-.- +++.+....+-.+|+++|++++.
T Consensus 45 ~~gkakLViiA~D-------~~p~~~~~~l~~lc~~~~VP~~~ 80 (134)
T 2ale_A 45 NRGISEFIIMAAD-------CEPIEILLHLPLLCEDKNVPYVF 80 (134)
T ss_dssp HHTCEEEEEEETT-------CSSGGGGTHHHHHHHHHTCCEEE
T ss_pred HhCCCeEEEEeCC-------CCHHHHHHHHHHHHHhcCCCEEE
Confidence 3456666666552 22223466777899999998654
No 350
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=23.38 E-value=64 Score=28.74 Aligned_cols=27 Identities=15% Similarity=0.030 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.+.+++|++-|+++|+-||.|=|..
T Consensus 105 Gt~~df~~Lv~~aH~~GikVilD~V~N 131 (686)
T 1qho_A 105 GNWTTFDTLVNDAHQNGIKVIVDFVPN 131 (686)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 357789999999999999999998773
No 351
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=23.34 E-value=1.5e+02 Score=22.20 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=20.1
Q ss_pred EEEEEcccccCCCcccCCH---HHHHHHHHHHHhh--CCEEEEe
Q psy6548 23 CAFMVEPIQGEAGAVVPDD---GYLKKVRALCSQY--NVLFIAD 61 (242)
Q Consensus 23 ~~i~~e~~~~~~G~~~~~~---~~l~~l~~l~~~~--~~~li~D 61 (242)
-.|++.++++..|.....+ +.++++++++.++ ++.+.+|
T Consensus 136 D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~ 179 (230)
T 1tqj_A 136 DLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVD 179 (230)
T ss_dssp SEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 3677777766544433333 4445555554433 6788887
No 352
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=23.14 E-value=53 Score=29.55 Aligned_cols=25 Identities=20% Similarity=0.022 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.++++++-|+++|+-||.|=|+.
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~N 290 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYN 290 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4789999999999999999998874
No 353
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=23.12 E-value=66 Score=28.67 Aligned_cols=27 Identities=11% Similarity=-0.000 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 39 PDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 39 ~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.+.+++|++-|+++|+-||.|=|..
T Consensus 114 Gt~~dfk~Lv~~aH~~GikVilD~V~N 140 (683)
T 3bmv_A 114 GSFTDFQNLINTAHAHNIKVIIDFAPN 140 (683)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 357889999999999999999998874
No 354
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=23.05 E-value=54 Score=26.71 Aligned_cols=24 Identities=8% Similarity=0.059 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhCCEEEEecccc
Q psy6548 42 GYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.++++++.|+++|+.+|+|=.+.
T Consensus 110 ~~~d~~v~~a~~~Gi~vild~h~~ 133 (395)
T 2jep_A 110 NRIQQVVDYAYNEGLYVIINIHGD 133 (395)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCGG
T ss_pred HHHHHHHHHHHHCCCEEEEECCCc
Confidence 468999999999999999986554
No 355
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=22.78 E-value=59 Score=29.43 Aligned_cols=25 Identities=8% Similarity=0.025 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+.++++++-|+++|+-||.|=|+.
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~N 296 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYN 296 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6789999999999999999998884
No 356
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.72 E-value=1.2e+02 Score=17.41 Aligned_cols=30 Identities=7% Similarity=0.102 Sum_probs=24.0
Q ss_pred EEEEeccC---cCCHHHHHHHHHHHHHHHHHHh
Q psy6548 209 IIRLSPAL---NITEQELREGLDIIINTINTMA 238 (242)
Q Consensus 209 ~lR~~~~~---~~t~e~i~~~~~~l~~~l~~~~ 238 (242)
++++.+.- ..|.|+-.++++.+.+.+.+..
T Consensus 2 ~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~l 34 (67)
T 3m21_A 2 FINIKLVPENGGPTNEQKQQLIEGVSDLMVKVL 34 (67)
T ss_dssp EEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56777665 6799999999999999887654
No 357
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=22.55 E-value=64 Score=26.53 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhCCEEEEec
Q psy6548 41 DGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De 62 (242)
-+.|.++++.|+++|+.+|+|=
T Consensus 99 ~~~LD~~i~~A~k~GI~viL~l 120 (383)
T 3pzg_A 99 FERLDYTIAKAKELGIKLIIVL 120 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 4679999999999999999984
No 358
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=22.51 E-value=64 Score=27.26 Aligned_cols=25 Identities=8% Similarity=0.130 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
-+.++++++.|+++|+.+|+|=.+.
T Consensus 133 l~~ld~vV~~a~~~Gi~VIldlH~~ 157 (458)
T 3qho_A 133 LQIMEKIIKKAGDLGIFVLLDYHRI 157 (458)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEEecccC
Confidence 4679999999999999999986553
No 359
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=22.51 E-value=70 Score=27.93 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 46789999999999999999998874
No 360
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=22.37 E-value=51 Score=28.56 Aligned_cols=39 Identities=13% Similarity=0.239 Sum_probs=25.3
Q ss_pred CEEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEec
Q psy6548 21 NICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADE 62 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De 62 (242)
.+.+|-+---..+.... .+..+++.++|++|++.+|+++
T Consensus 38 Gv~~vQlR~K~~~~~~~---~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 38 GVTLVQIREKDADTKFF---IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp TCSEEEECCSSSCTTHH---HHHHHHHHHHHHHTTCCEEECS
T ss_pred CCCEEEEecCCCCHHHH---HHHHHHHHHHHHhcCCEEEEeC
Confidence 35555554433332222 2467788999999999998865
No 361
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=22.30 E-value=69 Score=28.62 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=33.3
Q ss_pred CEEEEEEcccccCCC---c----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 21 NICAFMVEPIQGEAG---A----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 21 ~~~~i~~e~~~~~~G---~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
.+-+|.+.|++...+ + ..-+.+.+++|++-|+++|+-||.|=|..
T Consensus 278 Gvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 278 GVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp TCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 356788887653321 1 23457889999999999999999998863
No 362
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=22.10 E-value=77 Score=22.17 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhCCEEE-Eeccc
Q psy6548 42 GYLKKVRALCSQYNVLFI-ADEVQ 64 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li-~De~~ 64 (242)
.+.+-+..+|.+|++.|| +|+..
T Consensus 63 ~y~kLveAlC~E~~I~lIkVdd~k 86 (146)
T 3cg6_A 63 IHFTLIQAFCCENDIDIVRVGDVQ 86 (146)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCHH
T ss_pred HHHHHHHHHHhhcCCCeEEeCchh
Confidence 568888899999999987 77654
No 363
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=22.03 E-value=66 Score=26.78 Aligned_cols=20 Identities=5% Similarity=-0.076 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhhCCEEEEe
Q psy6548 42 GYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~D 61 (242)
+.+.++.++|+++|+.+|+|
T Consensus 111 ~~lD~~l~~a~~~Gi~vil~ 130 (440)
T 1uuq_A 111 QGLDYLLVELAKRDMTVVLY 130 (440)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 45679999999999999987
No 364
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=21.83 E-value=1.4e+02 Score=27.20 Aligned_cols=45 Identities=4% Similarity=-0.146 Sum_probs=32.5
Q ss_pred EEEEEEcccccCCCcccCCHHHHHHHHHHHHhhCCEEEEeccccc
Q psy6548 22 ICAFMVEPIQGEAGAVVPDDGYLKKVRALCSQYNVLFIADEVQTG 66 (242)
Q Consensus 22 ~~~i~~e~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~ 66 (242)
+--..+++-++...+-.-..+.++++++-|++.|+-||.|=|+.-
T Consensus 359 ~~y~a~~~~ygt~~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NH 403 (884)
T 4aio_A 359 VLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRVVMDVVYNH 403 (884)
T ss_dssp EEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred ccccCCCcccccCccccchHHHHHHHHHHHHhcCCceeeeecccc
Confidence 455667777765433221235699999999999999999998853
No 365
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=21.16 E-value=97 Score=27.15 Aligned_cols=28 Identities=11% Similarity=0.014 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQTGL 67 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~~~ 67 (242)
+.+.++++++-|+++|+-||.|=|+.-.
T Consensus 191 t~~d~~~lv~~~H~~Gi~VilD~V~NH~ 218 (602)
T 2bhu_A 191 RPEDLMALVDAAHRLGLGVFLDVVYNHF 218 (602)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 4678999999999999999999887533
No 366
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.13 E-value=81 Score=27.46 Aligned_cols=44 Identities=23% Similarity=0.320 Sum_probs=32.9
Q ss_pred EEEEEEcccccCC---Cc----------ccCCHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 22 ICAFMVEPIQGEA---GA----------VVPDDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 22 ~~~i~~e~~~~~~---G~----------~~~~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+-+|.+.|++... |+ ...+.+.++++++-|+++|+-||.|=|+.
T Consensus 186 vt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 186 VNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 5678888864321 21 12357889999999999999999998875
No 367
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=21.12 E-value=1.4e+02 Score=27.68 Aligned_cols=27 Identities=19% Similarity=-0.054 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhCCEEEEecccccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQTGL 67 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~~~~ 67 (242)
.+.++++++-|+++|+-||.|=|+.-+
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt 557 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHT 557 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEccccc
Confidence 478999999999999999999988543
No 368
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=20.95 E-value=1e+02 Score=26.63 Aligned_cols=27 Identities=15% Similarity=0.063 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhCCEEEEecccccc
Q psy6548 41 DGYLKKVRALCSQYNVLFIADEVQTGL 67 (242)
Q Consensus 41 ~~~l~~l~~l~~~~~~~li~De~~~~~ 67 (242)
.+.++++++-|+++|+-||.|=++.-+
T Consensus 167 ~~d~~~lv~~~h~~Gi~VilD~V~NH~ 193 (558)
T 3vgf_A 167 PEGFRKLVDEAHKKGLGVILDVVYNHV 193 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 578999999999999999999887533
No 369
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=20.82 E-value=77 Score=24.80 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhh-CCEEEEecccc
Q psy6548 42 GYLKKVRALCSQY-NVLFIADEVQT 65 (242)
Q Consensus 42 ~~l~~l~~l~~~~-~~~li~De~~~ 65 (242)
+.++.+.++++++ .++|++||+|.
T Consensus 115 ~~~~~l~~~~~~~~~~vlvlDe~~~ 139 (350)
T 2qen_A 115 EVFRELNDLGEELGEFIVAFDEAQY 139 (350)
T ss_dssp HHHHHHHHHHHHHSCEEEEEETGGG
T ss_pred HHHHHHHHHHhccCCEEEEEeCHHH
Confidence 4556666666654 78899999995
No 370
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=20.71 E-value=73 Score=25.22 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhCCEEEEe
Q psy6548 42 GYLKKVRALCSQYNVLFIAD 61 (242)
Q Consensus 42 ~~l~~l~~l~~~~~~~li~D 61 (242)
+.+.++.+.|+++|+++++|
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~ 161 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIE 161 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEE
Confidence 67889999999999999987
No 371
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=26.13 E-value=21 Score=23.92 Aligned_cols=22 Identities=9% Similarity=0.108 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhCCEEEEecccc
Q psy6548 44 LKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 44 l~~l~~l~~~~~~~li~De~~~ 65 (242)
-.+|++++++||+.++.|....
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPPLA 50 (114)
Confidence 5678899999999999997653
No 372
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=20.53 E-value=1.1e+02 Score=26.85 Aligned_cols=28 Identities=11% Similarity=-0.010 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQTGL 67 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~~~ 67 (242)
+.+.++++++-|+++|+-||.|=|+.-+
T Consensus 203 t~~~~~~lv~~~H~~Gi~VilD~V~NH~ 230 (617)
T 1m7x_A 203 TRDDFRYFIDAAHAAGLNVILDWVPGHF 230 (617)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 4678999999999999999999887533
No 373
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=20.49 E-value=2.5e+02 Score=20.39 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHCCceeccC-CCCEEEEeccCcCCHHHHHHHHHHHHHHHH
Q psy6548 186 LEVYDVCIKMKDAGLVTKPI-SNNIIRLSPALNITEQELREGLDIIINTIN 235 (242)
Q Consensus 186 ~~~~~~~~~l~~~gi~~~~~-~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 235 (242)
.....+.++..+.++-+.|. ++..||+.+|-- |+|.=.++++..++..+
T Consensus 73 ~~i~~IekAI~~SdLglnP~~dG~~Iri~iP~l-TeErRkelvK~~k~~~E 122 (185)
T 1dd5_A 73 SVLSLIEKAINASDLGLNPINDGNVIRLVFPSP-TTEQREKWVKKAKEIVE 122 (185)
T ss_dssp THHHHHHHHHHHSSSCCCCEECSSCEEEECCCC-CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCcccCCCEEEEeCCCC-CHHHHHHHHHHHHHHHH
Confidence 46788899999999988886 677899997654 88777777777665443
No 374
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=20.15 E-value=83 Score=27.84 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhhCCEEEEecccc
Q psy6548 40 DDGYLKKVRALCSQYNVLFIADEVQT 65 (242)
Q Consensus 40 ~~~~l~~l~~l~~~~~~~li~De~~~ 65 (242)
+.+.++++++-|+++|+-||.|=|..
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V~N 179 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFVLN 179 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 46789999999999999999998874
Done!