Your job contains 1 sequence.
>psy6552
MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKD
AQFRRHFQEMCASIGVDPLASRKGFWSLLGMGDFYYELSVQIVEVCLATNYKNGGLILLD
ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD
HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP
SLFTECMNAEKETI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6552
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260940 - symbol:lsn "larsen" species:7227 "Drosop... 781 1.3e-77 1
ZFIN|ZDB-GENE-041114-117 - symbol:snf8 "SNF8, ESCRT-II co... 720 3.7e-71 1
UNIPROTKB|Q08DR7 - symbol:SNF8 "Uncharacterized protein" ... 717 7.7e-71 1
UNIPROTKB|I3L6X7 - symbol:SNF8 "Uncharacterized protein" ... 714 1.6e-70 1
MGI|MGI:1343161 - symbol:Snf8 "SNF8, ESCRT-II complex sub... 713 2.1e-70 1
UNIPROTKB|Q96H20 - symbol:SNF8 "Vacuolar-sorting protein ... 711 3.3e-70 1
RGD|1310144 - symbol:Snf8 "SNF8, ESCRT-II complex subunit... 711 3.3e-70 1
UNIPROTKB|E2RTF6 - symbol:SNF8 "Uncharacterized protein" ... 710 4.3e-70 1
UNIPROTKB|E1BZH7 - symbol:SNF8 "Uncharacterized protein" ... 704 1.8e-69 1
WB|WBGene00016167 - symbol:vps-22 species:6239 "Caenorhab... 657 1.8e-64 1
DICTYBASE|DDB_G0283203 - symbol:vps22 "EAP30 family prote... 549 4.9e-53 1
TAIR|locus:2116357 - symbol:VPS22 "AT4G27040" species:370... 529 6.5e-51 1
POMBASE|SPBC651.05c - symbol:dot2 "ESCRT II complex subun... 384 1.5e-35 1
SGD|S000005923 - symbol:SNF8 "Component of the ESCRT-II c... 330 7.9e-30 1
ASPGD|ASPL0000065775 - symbol:AN7106 species:162425 "Emer... 316 2.4e-28 1
CGD|CAL0000623 - symbol:VPS22 species:5476 "Candida albic... 180 2.3e-23 2
UNIPROTKB|Q59N31 - symbol:SNF8 "Putative uncharacterized ... 180 2.3e-23 2
FB|FBgn0086785 - symbol:Vps36 "Vacuolar protein sorting 3... 118 0.00016 1
>FB|FBgn0260940 [details] [associations]
symbol:lsn "larsen" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0045450 "bicoid mRNA
localization" evidence=IMP] [GO:0042981 "regulation of apoptotic
process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008593 "regulation of Notch signaling pathway"
evidence=IEP] [GO:0010797 "regulation of multivesicular body size
involved in endosome transport" evidence=IDA] EMBL:AE014297
GO:GO:0042981 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0045450 GO:GO:0008593 eggNOG:NOG318316
GeneTree:ENSGT00390000007843 KO:K12188 OMA:QFQEMCA
InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 GO:GO:0010797 EMBL:BT032686
RefSeq:NP_650987.1 UniGene:Dm.16633 SMR:Q9VD72 IntAct:Q9VD72
MINT:MINT-1598302 STRING:Q9VD72 EnsemblMetazoa:FBtr0084135
GeneID:42572 KEGG:dme:Dmel_CG6637 UCSC:CG6637-RA CTD:42572
FlyBase:FBgn0260940 InParanoid:Q9VD72 OrthoDB:EOG4BCC3W
GenomeRNAi:42572 NextBio:829479 Uniprot:Q9VD72
Length = 254
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 144/243 (59%), Positives = 190/243 (78%)
Query: 1 MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKD 60
MRRR G+GAIQ+QKL EKYKDKGT +QENQLEQ+++ + FR KLE FA ++K +I+K+
Sbjct: 1 MRRRVGLGAIQQQKLAAEKYKDKGTDLQENQLEQMTKQMEVFRVKLEEFAMKHKEDIRKN 60
Query: 61 AQFRRHFQEMCASIGVDPLASRKGFWSLLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+QFR+ FQEMCA+IGVDPLA+ KGFWS+LGMGDFYYEL VQ+VEVCLA N+K GGL+ LD
Sbjct: 61 SQFRKQFQEMCAAIGVDPLATGKGFWSVLGMGDFYYELGVQVVEVCLAANHKTGGLMELD 120
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
+LR RL+ +RG+S HQ+IT ED+L AAKKL IFGNGF + +G+G+Y+VQSIPGELS++
Sbjct: 121 DLRRRLIAARGQSSVHQEITKEDILMAAKKLSIFGNGFVVHKLGKGKYIVQSIPGELSME 180
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
+ +L ++ + ++ S L +L W+ RAQ +LD ++ EG WID Q+ E YWFP
Sbjct: 181 ETNILNAASNTEQGCVTQSQLIKDLGWTDYRAQQSLDKVLGEGLCWIDKQAGDEPAYWFP 240
Query: 241 SLF 243
SLF
Sbjct: 241 SLF 243
>ZFIN|ZDB-GENE-041114-117 [details] [associations]
symbol:snf8 "SNF8, ESCRT-II complex subunit,
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
ZFIN:ZDB-GENE-041114-117 GO:GO:0005737 GO:GO:0015031
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CR926135 EMBL:BC085373
EMBL:AM422108 IPI:IPI00834204 RefSeq:NP_001007413.1
UniGene:Dr.84729 ProteinModelPortal:Q5U3V9 STRING:Q5U3V9
Ensembl:ENSDART00000080888 GeneID:492771 KEGG:dre:492771 CTD:11267
eggNOG:NOG318316 GeneTree:ENSGT00390000007843 HOGENOM:HOG000170930
HOVERGEN:HBG079872 InParanoid:Q1L8C5 KO:K12188 OMA:QFQEMCA
OrthoDB:EOG4V6ZHD NextBio:20865269 Bgee:Q5U3V9 InterPro:IPR007286
InterPro:IPR016689 PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215
Uniprot:Q5U3V9
Length = 258
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 137/250 (54%), Positives = 189/250 (75%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++G+ + E+Q+ Q+S+ L+TF+ LE FAS++K EI+K +
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGSVLAEDQIAQMSKQLDTFKTHLEEFASKHKQEIRKSS 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
QFR FQEMCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI LD
Sbjct: 63 QFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLD 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL R++K RGK Q D++ +DL+ A KKLK GNGF +IP+G G YLVQS+P EL++D
Sbjct: 123 ELHHRVLKGRGKFAQ--DVSQDDLVRAIKKLKAMGNGFGMIPVG-GTYLVQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A K + +++VS + L W ERA H LD +++EG AW+D+Q+ E YW P
Sbjct: 180 HTVVLQ-LAEK-KGYVTVSEIRESLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLP 237
Query: 241 SLFTECMNAE 250
+LF+E ++ +
Sbjct: 238 ALFSELLSQD 247
>UNIPROTKB|Q08DR7 [details] [associations]
symbol:SNF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0005667 CTD:11267 eggNOG:NOG318316
GeneTree:ENSGT00390000007843 HOGENOM:HOG000170930
HOVERGEN:HBG079872 KO:K12188 OMA:QFQEMCA OrthoDB:EOG4V6ZHD
InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 EMBL:DAAA02049055 EMBL:BC123598
IPI:IPI00706621 RefSeq:NP_001068679.1 UniGene:Bt.5307 STRING:Q08DR7
Ensembl:ENSBTAT00000025031 GeneID:505628 KEGG:bta:505628
InParanoid:Q08DR7 NextBio:20867233 Uniprot:Q08DR7
Length = 258
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 136/250 (54%), Positives = 188/250 (75%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GFSIIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFSIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSAIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>UNIPROTKB|I3L6X7 [details] [associations]
symbol:SNF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0005667 GeneTree:ENSGT00390000007843 KO:K12188 OMA:QFQEMCA
InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 EMBL:FP312864 RefSeq:XP_003358131.1
Ensembl:ENSSSCT00000030250 GeneID:100621229 KEGG:ssc:100621229
Uniprot:I3L6X7
Length = 258
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 136/250 (54%), Positives = 188/250 (75%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GFSIIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFSIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>MGI|MGI:1343161 [details] [associations]
symbol:Snf8 "SNF8, ESCRT-II complex subunit, homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] MGI:MGI:1343161
GO:GO:0031902 GO:GO:0015031 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 EMBL:AL603682 CTD:11267
eggNOG:NOG318316 GeneTree:ENSGT00390000007843 HOGENOM:HOG000170930
HOVERGEN:HBG079872 KO:K12188 OMA:QFQEMCA OrthoDB:EOG4V6ZHD
InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AK013058 EMBL:BC003938
IPI:IPI00111949 RefSeq:NP_291046.1 UniGene:Mm.372235
ProteinModelPortal:Q9CZ28 SMR:Q9CZ28 STRING:Q9CZ28
PhosphoSite:Q9CZ28 PaxDb:Q9CZ28 PRIDE:Q9CZ28
Ensembl:ENSMUST00000006217 GeneID:27681 KEGG:mmu:27681
UCSC:uc007lbb.1 InParanoid:A2A6M2 NextBio:305920 Bgee:Q9CZ28
Genevestigator:Q9CZ28 GermOnline:ENSMUSG00000006058 Uniprot:Q9CZ28
Length = 258
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 135/250 (54%), Positives = 187/250 (74%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GF IIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSEIKTSLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>UNIPROTKB|Q96H20 [details] [associations]
symbol:SNF8 "Vacuolar-sorting protein SNF8" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] Reactome:REACT_11123
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351 GO:GO:0016197
GO:GO:0005667 GO:GO:0008134 GO:GO:0016044 CTD:11267
eggNOG:NOG318316 HOGENOM:HOG000170930 HOVERGEN:HBG079872 KO:K12188
OMA:QFQEMCA OrthoDB:EOG4V6ZHD InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AF156102
EMBL:BC008976 EMBL:BC038830 IPI:IPI00101524 IPI:IPI00640699
RefSeq:NP_009172.2 UniGene:Hs.127249 PDB:2ZME PDB:3CUQ PDBsum:2ZME
PDBsum:3CUQ ProteinModelPortal:Q96H20 SMR:Q96H20 IntAct:Q96H20
MINT:MINT-5001874 STRING:Q96H20 PhosphoSite:Q96H20 DMDM:73919323
PaxDb:Q96H20 PRIDE:Q96H20 DNASU:11267 Ensembl:ENST00000290330
Ensembl:ENST00000502492 GeneID:11267 KEGG:hsa:11267 UCSC:uc002ioj.3
UCSC:uc002iok.3 GeneCards:GC17M047007 H-InvDB:HIX0135631
HGNC:HGNC:17028 MIM:610904 neXtProt:NX_Q96H20 PharmGKB:PA142670892
InParanoid:Q96H20 PhylomeDB:Q96H20 EvolutionaryTrace:Q96H20
GenomeRNAi:11267 NextBio:42875 ArrayExpress:Q96H20 Bgee:Q96H20
CleanEx:HS_SNF8 Genevestigator:Q96H20 GermOnline:ENSG00000159210
Uniprot:Q96H20
Length = 258
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 135/250 (54%), Positives = 187/250 (74%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GF IIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>RGD|1310144 [details] [associations]
symbol:Snf8 "SNF8, ESCRT-II complex subunit, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
RGD:1310144 GO:GO:0031902 GO:GO:0015031 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
CTD:11267 eggNOG:NOG318316 GeneTree:ENSGT00390000007843
HOGENOM:HOG000170930 HOVERGEN:HBG079872 KO:K12188 OMA:QFQEMCA
OrthoDB:EOG4V6ZHD InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 EMBL:BC086364
IPI:IPI00192521 RefSeq:NP_001007805.1 UniGene:Rn.162167
ProteinModelPortal:Q5RK19 STRING:Q5RK19 Ensembl:ENSRNOT00000008964
GeneID:287645 KEGG:rno:287645 UCSC:RGD:1310144 InParanoid:Q5RK19
NextBio:626715 ArrayExpress:Q5RK19 Genevestigator:Q5RK19
GermOnline:ENSRNOG00000006500 Uniprot:Q5RK19
Length = 258
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 135/250 (54%), Positives = 187/250 (74%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GF IIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>UNIPROTKB|E2RTF6 [details] [associations]
symbol:SNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0005667 CTD:11267 GeneTree:ENSGT00390000007843
KO:K12188 OMA:QFQEMCA InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AAEX03006518
RefSeq:XP_548183.2 ProteinModelPortal:E2RTF6
Ensembl:ENSCAFT00000026744 GeneID:491063 KEGG:cfa:491063
NextBio:20863960 Uniprot:E2RTF6
Length = 258
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 135/250 (54%), Positives = 187/250 (74%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q D++ +DL+ A KKLK G GF IIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--DVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A KN +++VS + L W TERA+ L+ +++EG AW+D Q+P E YW P
Sbjct: 180 HTVVLQ-LAEKN-GYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLP 237
Query: 241 SLFTECMNAE 250
+LFT+ + E
Sbjct: 238 ALFTDLYSQE 247
>UNIPROTKB|E1BZH7 [details] [associations]
symbol:SNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0005667 CTD:11267 GeneTree:ENSGT00390000007843 KO:K12188
OMA:QFQEMCA InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AADN02070183 EMBL:AADN02070182
IPI:IPI00572078 RefSeq:XP_418112.1 UniGene:Gga.12283
Ensembl:ENSGALT00000001993 GeneID:419990 KEGG:gga:419990
NextBio:20822966 Uniprot:E1BZH7
Length = 258
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 133/250 (53%), Positives = 188/250 (75%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G GAI K+KL + KYK++GT + E+QL Q+S+ L+ F+ LE FAS++K EI+K+
Sbjct: 3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
+FR FQ+MCA+IGVDPLAS KGFWS +LG+GDFYYEL VQI+EVCLA ++NGGLI L+
Sbjct: 63 EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
EL +++K RGK Q +++ +DLL A KKLK+ G+GF IIP+G G YL+QS+P EL++D
Sbjct: 123 ELHQQVLKGRGKFAQ--EVSQDDLLRAIKKLKVLGSGFGIIPVG-GTYLIQSVPAELNMD 179
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
H++VLQ +A K + +++V + + L W ERA+ L+ +++EG AW+DTQ+ E YW P
Sbjct: 180 HTVVLQ-LAEK-KGYVTVGEIKSSLKWEVERAKQILEHLLKEGMAWLDTQAAGEPQYWLP 237
Query: 241 SLFTECMNAE 250
+LFTE + E
Sbjct: 238 ALFTELYSQE 247
>WB|WBGene00016167 [details] [associations]
symbol:vps-22 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
GO:GO:0008340 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:FO080681
eggNOG:NOG318316 GeneTree:ENSGT00390000007843 HOGENOM:HOG000170930
KO:K12188 OMA:QFQEMCA InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 RefSeq:NP_498052.1
ProteinModelPortal:Q18258 SMR:Q18258 STRING:Q18258 PaxDb:Q18258
EnsemblMetazoa:C27F2.5.1 EnsemblMetazoa:C27F2.5.2 GeneID:175672
KEGG:cel:CELE_C27F2.5 UCSC:C27F2.5.1 CTD:175672 WormBase:C27F2.5
InParanoid:Q18258 NextBio:889154 Uniprot:Q18258
Length = 269
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 124/256 (48%), Positives = 180/256 (70%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RRR GV AIQK++ K+ KG + QL Q SQ L LE FA +++EIKK++
Sbjct: 4 RRRIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQLSAGLEMFAQRHRDEIKKNS 63
Query: 62 QFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILLD 120
QFRRHFQEMCAS+GVDPLAS KGFW+ LG GDFYYEL +QIVE+CL+T + NGG++ ++
Sbjct: 64 QFRRHFQEMCASVGVDPLASSKGFWAKALGFGDFYYELGIQIVEICLSTTHINGGIMTVE 123
Query: 121 ELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLD 180
E+R RL+++R ++ + I+ +D+L A KLK+ GNGF ++P+G G++LVQS+PGELS+D
Sbjct: 124 EIRNRLMRTRSRT-RKDTISTDDILRAVDKLKVLGNGFELVPLGGGRFLVQSVPGELSMD 182
Query: 181 HSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFP 240
HS VLQ +++ A+++ ++ ++L W RA AL+ +V+EG AW D Q+ YWFP
Sbjct: 183 HSRVLQ--LAEDAAYVTKELIIDKLRWDEARASSALEHLVKEGLAWTDEQASDTTQYWFP 240
Query: 241 SLFTE--CMNAEKETI 254
SLF + C ++ ++
Sbjct: 241 SLFLQQYCHSSSSTSV 256
>DICTYBASE|DDB_G0283203 [details] [associations]
symbol:vps22 "EAP30 family protein" species:44689
"Dictyostelium discoideum" [GO:0000814 "ESCRT II complex"
evidence=ISS] [GO:0006605 "protein targeting" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
dictyBase:DDB_G0283203 GO:GO:0006605 GenomeReviews:CM000153_GR
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AAFI02000051
eggNOG:NOG318316 KO:K12188 OMA:QFQEMCA InterPro:IPR007286
InterPro:IPR016689 PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215
RefSeq:XP_639221.1 HSSP:Q12483 ProteinModelPortal:Q54RC4
STRING:Q54RC4 EnsemblProtists:DDB0234025 GeneID:8623994
KEGG:ddi:DDB_G0283203 InParanoid:Q54RC4 ProtClustDB:CLSZ2430395
GO:GO:0000814 Uniprot:Q54RC4
Length = 246
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 108/245 (44%), Positives = 164/245 (66%)
Query: 1 MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKD 60
MRR G+ A QKQ Q++ ++ + + ++ + L F++ LE FA+++K +I K+
Sbjct: 1 MRRGIGIQAAQKQTQTQKQLQNVSEQLNTENINKIKEQLLVFKENLEIFATKHKKDIIKN 60
Query: 61 AQFRRHFQEMCASIGVDPLASRKGFW-SLLGMGDFYYELSVQIVEVCLATNYKNGGLILL 119
+FR++FQ+MC IGVDPLAS KGFW +LG+GDFYY L VQI+E+CL NGGL+ +
Sbjct: 61 PEFRKYFQDMCNMIGVDPLASNKGFWCQVLGVGDFYYTLGVQIIEICLKYRSSNGGLMEM 120
Query: 120 DELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSL 179
D L L K RGK+ Q+I+ +D+ + KLK+ GNGF+II + G+ LVQS+P EL+
Sbjct: 121 DTLAEHLRKLRGKN--SQEISCDDIECSISKLKVLGNGFNIIKVSGGKKLVQSVPCELNK 178
Query: 180 DHSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWF 239
DH+ ++ +A N A I+ S++ ++L WS ER + ++F++QE WID QS E +YWF
Sbjct: 179 DHTDIII-LAQDNNASITQSLVISKLKWSEERINNVINFLLQESMIWIDEQS-NETIYWF 236
Query: 240 PSLFT 244
PSL++
Sbjct: 237 PSLWS 241
>TAIR|locus:2116357 [details] [associations]
symbol:VPS22 "AT4G27040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000814 "ESCRT II complex" evidence=ISS]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0015031
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AL035440 eggNOG:NOG318316
HOGENOM:HOG000170930 KO:K12188 OMA:QFQEMCA InterPro:IPR007286
InterPro:IPR016689 PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215
HSSP:Q12483 GO:GO:0000814 EMBL:AY299265 EMBL:BT020389 EMBL:BT020552
IPI:IPI00537751 PIR:T04827 RefSeq:NP_001119065.1
RefSeq:NP_001119066.1 RefSeq:NP_001119067.1 RefSeq:NP_194434.2
UniGene:At.48906 UniGene:At.68943 UniGene:At.68944 UniGene:At.68945
ProteinModelPortal:Q5M759 SMR:Q5M759 IntAct:Q5M759 STRING:Q5M759
DNASU:828812 EnsemblPlants:AT4G27040.1 EnsemblPlants:AT4G27040.2
EnsemblPlants:AT4G27040.3 EnsemblPlants:AT4G27040.4 GeneID:828812
KEGG:ath:AT4G27040 TAIR:At4g27040 InParanoid:Q5M759
Genevestigator:Q5M759 Uniprot:Q5M759
Length = 250
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 106/242 (43%), Positives = 159/242 (65%)
Query: 1 MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKD 60
MRRR G+G +QK +++Y+ G ++ + + + + + L+TFR +LE FA ++KN+I+K+
Sbjct: 1 MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN 60
Query: 61 AQFRRHFQEMCASIGVDPLASRKGFWS-LLGMGDFYYELSVQIVEVCLATNYKNGGLILL 119
FR F EMCA+IGVDPLAS KGFW+ LLG+GDFYYEL VQI+EVC+ T NGGLI L
Sbjct: 61 PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL 120
Query: 120 DELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSL 179
EL L + R K + +T +D L A KLK+ G+GF +I IG+ + LV+S+P EL+
Sbjct: 121 QELCNHLRQRRKKD--REAVTEDDCLRAISKLKVLGSGFEVITIGKKK-LVRSVPTELNK 177
Query: 180 DHSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDT-QSPQEHLYW 238
DH+ +L+ ++ + + V + L+W++ R AL+ +++EG A ID + YW
Sbjct: 178 DHNQILE--LAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYW 235
Query: 239 FP 240
FP
Sbjct: 236 FP 237
>POMBASE|SPBC651.05c [details] [associations]
symbol:dot2 "ESCRT II complex subunit Dot2" species:4896
"Schizosaccharomyces pombe" [GO:0000814 "ESCRT II complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=IC]
[GO:0007127 "meiosis I" evidence=TAS] [GO:0043328 "protein
targeting to vacuole involved in ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IMP] [GO:0045141 "meiotic telomere clustering"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0051300 "spindle pole body organization"
evidence=IMP] [GO:0005816 "spindle pole body" evidence=IDA]
PomBase:SPBC651.05c GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0007127 GO:GO:0045141 GO:GO:0043328 GO:GO:0051300
GO:GO:0006900 eggNOG:NOG318316 HOGENOM:HOG000170930 KO:K12188
OMA:QFQEMCA InterPro:IPR007286 InterPro:IPR016689 PANTHER:PTHR12806
Pfam:PF04157 PIRSF:PIRSF017215 HSSP:Q12483 GO:GO:0000814 PIR:T40604
RefSeq:NP_595503.1 ProteinModelPortal:O94663 STRING:O94663
EnsemblFungi:SPBC651.05c.1 GeneID:2541147 KEGG:spo:SPBC651.05c
OrthoDB:EOG4R7ZM1 NextBio:20802260 Uniprot:O94663
Length = 252
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 77/240 (32%), Positives = 142/240 (59%)
Query: 1 MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKD 60
MR+R G+GA+ + ++ Y++ G + E Q ++++ L+TF++ L++FA E+ EIK++
Sbjct: 1 MRKRIGIGALNDDEYLKQ-YEEVGNELIEQQSDEIASQLSTFQEALKTFAREHATEIKQN 59
Query: 61 AQFRRHFQEMCASIGVDPLASR--KGFWSLLGMGDFYYELSVQIVEVCLATNYKNGGLIL 118
+QFR F ++ IG+DP S + W+ +GM +FYY+++V+++EVC AT +NGGL+
Sbjct: 60 SQFRNTFVKLALKIGLDPFVSGSDESAWAAVGMNEFYYQVAVRVIEVCYATQMENGGLLS 119
Query: 119 LDELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELS 178
+ ++ R + ++ H+ + D++ A L G GF + I QY ++S+P EL+
Sbjct: 120 VSQV-CRFLNEENEAFGHEWLRETDVVRAVDSLAPLGPGFVLEKIAGKQY-IRSLPLELN 177
Query: 179 LDHSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYW 238
D ++VL+ V ++++S+L + W R L+ +V + WID+Q E YW
Sbjct: 178 TDQNVVLEAVEILG--YVTISILRDNYAWERSRCIQVLNDLVSKSLLWIDSQGV-EMAYW 234
>SGD|S000005923 [details] [associations]
symbol:SNF8 "Component of the ESCRT-II complex" species:4932
"Saccharomyces cerevisiae" [GO:0000814 "ESCRT II complex"
evidence=IDA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IMP]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC] [GO:0006623
"protein targeting to vacuole" evidence=IMP;IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] SGD:S000005923 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:Z71255 EMBL:BK006949 EMBL:Z48483
EMBL:U33335 GO:GO:0006623 GO:GO:0000433 GO:GO:0043162
eggNOG:NOG318316 GeneTree:ENSGT00390000007843 HOGENOM:HOG000170930
KO:K12188 OMA:QFQEMCA InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 GO:GO:0000814
OrthoDB:EOG4R7ZM1 EMBL:U10361 EMBL:AY692759 PIR:S52529
RefSeq:NP_015323.1 PDB:1U5T PDB:1W7P PDBsum:1U5T PDBsum:1W7P
ProteinModelPortal:Q12483 SMR:Q12483 DIP:DIP-1745N IntAct:Q12483
MINT:MINT-401148 STRING:Q12483 PaxDb:Q12483 PRIDE:Q12483
EnsemblFungi:YPL002C GeneID:856105 KEGG:sce:YPL002C CYGD:YPL002c
EvolutionaryTrace:Q12483 NextBio:981161 Genevestigator:Q12483
GermOnline:YPL002C Uniprot:Q12483
Length = 233
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 83/243 (34%), Positives = 130/243 (53%)
Query: 3 RRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDAQ 62
++ G+ A + L+ KY D +I E Q +L L F+++L FA ++ +E++ +
Sbjct: 2 KQFGLAAFDE--LKDGKYNDVNKTILEKQSVELRDQLMVFQERLVEFAKKHNSELQASPE 59
Query: 63 FRRHFQEMCASIGVDPLASRKGFWSLLGMGDFYYELSVQIVEVCLATNYKNGGLILLDEL 122
FR F MC+SIG+DPL+ L + DFYYE+ ++++E+C T NGG+I EL
Sbjct: 60 FRSKFMHMCSSIGIDPLSLFDRDKHLFTVNDFYYEVCLKVIEICRQTKDMNGGVISFQEL 119
Query: 123 RTRLVKSRGKSLQHQDITNE-DLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGELSLDH 181
V R ++ D+ D+L K L+ F I I +G+ ++S+P EL+ D
Sbjct: 120 EK--VHFRKLNVGLDDLEKSIDML---KSLECF----EIFQI-RGKKFLRSVPNELTSDQ 169
Query: 182 SLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEHLYWFPS 241
+ +L+ + S + S+S+L L W R++ ALD MV G WID Q E LYW PS
Sbjct: 170 TKILE-ICSIL-GYSSISLLKANLGWEAVRSKSALDEMVANGLLWIDYQGGAEALYWDPS 227
Query: 242 LFT 244
T
Sbjct: 228 WIT 230
>ASPGD|ASPL0000065775 [details] [associations]
symbol:AN7106 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000814
"ESCRT II complex" evidence=IEA] [GO:0045141 "meiotic telomere
clustering" evidence=IEA] [GO:0051300 "spindle pole body
organization" evidence=IEA] [GO:0043328 "protein targeting to
vacuole involved in ubiquitin-dependent protein catabolic process
via the multivesicular body sorting pathway" evidence=IEA]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IEA] Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BN001304 EMBL:AACD01000119 eggNOG:NOG318316
HOGENOM:HOG000170930 KO:K12188 OMA:QFQEMCA InterPro:IPR007286
InterPro:IPR016689 PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215
OrthoDB:EOG4R7ZM1 RefSeq:XP_664710.1 ProteinModelPortal:Q5AX74
STRING:Q5AX74 EnsemblFungi:CADANIAT00000359 GeneID:2869862
KEGG:ani:AN7106.2 Uniprot:Q5AX74
Length = 264
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 81/255 (31%), Positives = 130/255 (50%)
Query: 2 RRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDA 61
RR G+GA + + Y + G +++ L L+ F+ L +FA E+ + IK +
Sbjct: 4 RRGVGLGAFANRTQATQSYANHGANLRSTHTSSLQTQLSVFQTLLHNFALEHSSTIKSNP 63
Query: 62 QFRRHFQEMCASIGVDPLASR--KG------------FWSLLGMGDFY-YELSVQIVEVC 106
FR F MC +IGVDPLA+ KG FW+ + GD + V + V
Sbjct: 64 TFRAEFARMCNAIGVDPLAASNVKGKNGRKALGDGSSFWTQIMGGDMNDFYFEVAVRVVE 123
Query: 107 LATNYKNGGLILLDELRTRLVKSRGKSL-QHQDITNEDLLAAAKKLKIFGNGFSIIPIGQ 165
L + L+ R +G+++ ++T++D+L A K L+ G+GFS I +G
Sbjct: 124 LCRETRRENGGLIGVEECRKRVGKGRAIGSGLEVTDDDILRAVKALEPLGSGFSTILVGS 183
Query: 166 GQYLVQSIPGELSLDHSLVLQQVASKNEAHISVSVLNNELNWSTERAQHALDFMVQEGYA 225
QY ++SIP EL+ D + VL+ + ++SVS+L LNW RA+ +D ++ +G
Sbjct: 184 KQY-IRSIPKELNTDQATVLEVIQVLG--YVSVSMLQINLNWEKARAKTVMDDLLADGLV 240
Query: 226 WIDTQSPQEHLYWFP 240
W+D QS +E YW P
Sbjct: 241 WVDLQSAEEE-YWSP 254
>CGD|CAL0000623 [details] [associations]
symbol:VPS22 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0036178 "filamentous growth
of a population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0071285
"cellular response to lithium ion" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000814 "ESCRT II complex" evidence=IEA] [GO:0071469 "cellular
response to alkalinity" evidence=IMP] [GO:0036177 "filamentous
growth of a population of unicellular organisms in response to pH"
evidence=IMP] [GO:0051300 "spindle pole body organization"
evidence=IEA] [GO:0045141 "meiotic telomere clustering"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000433
"negative regulation of transcription from RNA polymerase II
promoter by glucose" evidence=IEA] CGD:CAL0000623 GO:GO:0036178
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0071469 GO:GO:0071285
eggNOG:NOG318316 KO:K12188 InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AACQ01000212
EMBL:AACQ01000211 RefSeq:XP_711135.1 RefSeq:XP_711153.1
ProteinModelPortal:Q59N31 STRING:Q59N31 GeneID:3647250
GeneID:3647264 KEGG:cal:CaO19.13675 KEGG:cal:CaO19.6296
Uniprot:Q59N31
Length = 261
Score = 180 (68.4 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 46/152 (30%), Positives = 76/152 (50%)
Query: 93 DFYYELSVQIVEVCLATNYKNGGLILLDELRTRLVKS---RGKSLQHQDITNEDLLAAAK 149
+F L+V+I+E+C T NGGLI L EL + L S G SL ++ +D+ ++
Sbjct: 110 NFGVALAVKIIEICQQTRDLNGGLISLKELISTLQNSCETEGISLV---VSEKDIESSLN 166
Query: 150 KLKIFGNGFSIIPIGQGQYLVQSIPGELSLDHSLVLQQVASKNEAHISVSVLNNELNWST 209
L G G+ I+ I ++L S LS D L + ++ +++ +L + W
Sbjct: 167 NLNTLGKGYEILIINGKKWLKFSSTENLSNDQ-LKIYELCEFMGGYVTYRLLRDNYGWDK 225
Query: 210 ERAQHALDFMVQEGYAWIDTQSPQEHLYWFPS 241
R + +D M+ G+ W+D+Q E YW PS
Sbjct: 226 VRCKTVIDEMIMNGFLWVDSQDNGEWQYWEPS 257
Score = 117 (46.2 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 16 EQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDAQFRRHFQEMCASIG 75
+++ Y G S+ E QLS L F+ L +FA+++ +EI + +F+ F ++ SIG
Sbjct: 10 DRDAYLQLGKSLNEQHSNQLSTQLQVFQSALINFANDHGDEISSNLEFKNKFTQIVQSIG 69
Query: 76 VDPL 79
+DPL
Sbjct: 70 IDPL 73
>UNIPROTKB|Q59N31 [details] [associations]
symbol:SNF8 "Putative uncharacterized protein SNF8"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0036178
"filamentous growth of a population of unicellular organisms in
response to neutral pH" evidence=IMP] [GO:0071285 "cellular
response to lithium ion" evidence=IMP] [GO:0071467 "cellular
response to pH" evidence=IMP] [GO:0071469 "cellular response to
alkalinity" evidence=IMP] CGD:CAL0000623 GO:GO:0036178
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0071469 GO:GO:0071285
eggNOG:NOG318316 KO:K12188 InterPro:IPR007286 InterPro:IPR016689
PANTHER:PTHR12806 Pfam:PF04157 PIRSF:PIRSF017215 EMBL:AACQ01000212
EMBL:AACQ01000211 RefSeq:XP_711135.1 RefSeq:XP_711153.1
ProteinModelPortal:Q59N31 STRING:Q59N31 GeneID:3647250
GeneID:3647264 KEGG:cal:CaO19.13675 KEGG:cal:CaO19.6296
Uniprot:Q59N31
Length = 261
Score = 180 (68.4 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 46/152 (30%), Positives = 76/152 (50%)
Query: 93 DFYYELSVQIVEVCLATNYKNGGLILLDELRTRLVKS---RGKSLQHQDITNEDLLAAAK 149
+F L+V+I+E+C T NGGLI L EL + L S G SL ++ +D+ ++
Sbjct: 110 NFGVALAVKIIEICQQTRDLNGGLISLKELISTLQNSCETEGISLV---VSEKDIESSLN 166
Query: 150 KLKIFGNGFSIIPIGQGQYLVQSIPGELSLDHSLVLQQVASKNEAHISVSVLNNELNWST 209
L G G+ I+ I ++L S LS D L + ++ +++ +L + W
Sbjct: 167 NLNTLGKGYEILIINGKKWLKFSSTENLSNDQ-LKIYELCEFMGGYVTYRLLRDNYGWDK 225
Query: 210 ERAQHALDFMVQEGYAWIDTQSPQEHLYWFPS 241
R + +D M+ G+ W+D+Q E YW PS
Sbjct: 226 VRCKTVIDEMIMNGFLWVDSQDNGEWQYWEPS 257
Score = 117 (46.2 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 16 EQEKYKDKGTSIQENQLEQLSQHLNTFRDKLESFASEYKNEIKKDAQFRRHFQEMCASIG 75
+++ Y G S+ E QLS L F+ L +FA+++ +EI + +F+ F ++ SIG
Sbjct: 10 DRDAYLQLGKSLNEQHSNQLSTQLQVFQSALINFANDHGDEISSNLEFKNKFTQIVQSIG 69
Query: 76 VDPL 79
+DPL
Sbjct: 70 IDPL 73
>FB|FBgn0086785 [details] [associations]
symbol:Vps36 "Vacuolar protein sorting 36" species:7227
"Drosophila melanogaster" [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0008593 "regulation of Notch signaling pathway"
evidence=IEP] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
EMBL:AE014296 GO:GO:0042981 GO:GO:0015031 GO:GO:0008283
GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003730
GO:GO:0051028 GO:GO:0032266 GO:GO:0008593 KO:K12190
InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969 OMA:CCIAIPL
CTD:51028 EMBL:AY118941 EMBL:BT044237 RefSeq:NP_648660.1
UniGene:Dm.7252 ProteinModelPortal:Q9VU87 SMR:Q9VU87
MINT:MINT-833367 STRING:Q9VU87 PaxDb:Q9VU87
EnsemblMetazoa:FBtr0075818 GeneID:39523 KEGG:dme:Dmel_CG10711
UCSC:CG10711-RA FlyBase:FBgn0086785 GeneTree:ENSGT00390000017209
InParanoid:Q9VU87 OrthoDB:EOG46HDS5 PhylomeDB:Q9VU87
GenomeRNAi:39523 NextBio:814096 Bgee:Q9VU87 Uniprot:Q9VU87
Length = 399
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 61/247 (24%), Positives = 110/247 (44%)
Query: 1 MRRRAGVGAIQKQKLEQEKYKDKGTSIQENQLEQL---SQHLNTFRDKLESFASEYKNEI 57
+++R G+G I++ + K D+ ++ L L ++ + + S + K EI
Sbjct: 166 IQKRTGIGGIERHLEAKAKATDENIALAFQDLSVLMAMAKDMVGVSKTISSKIRKQKGEI 225
Query: 58 KKDAQFRRHFQEMCASIGVDPLASRKGFWSLLGMGDFYYELSVQIVEVCLATNYKNGGLI 117
D R F+ S+G+D +R F S ++ L+ QI E+ L + GG++
Sbjct: 226 SDDETVR--FKSYLMSLGIDDPVTRDNFTS---NSAYFSSLARQICEMLLDPIEEQGGMM 280
Query: 118 LLDELRTRLVKSRGKSLQHQDITNEDLLAAAKKLKIFGNGFSIIPIGQGQYLVQSIPGEL 177
L ++ R+ ++RG L ++ EDLL A ++L + G ++Q E
Sbjct: 281 SLADVYCRVNRARGLEL----LSPEDLLHACEQLS---GPIRLRSFPSGARVLQL---E- 329
Query: 178 SLDHSLVLQQVASKNEAHISVSV--LNNELNWSTERAQHALDFMVQEGYAWIDTQSPQEH 235
S D +L+ K EA S++V L +L S A+ L +V E + E
Sbjct: 330 SHDDALIAVDTLEKVEAAESLAVEELAKQLGISLLLAKERL--LVAERLGKVCRDESVEG 387
Query: 236 LYWFPSL 242
L ++P+L
Sbjct: 388 LRFYPNL 394
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 22 0.47 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 603 (64 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 27.19u 0.09s 27.28t Elapsed: 00:00:06
Total cpu time: 27.20u 0.09s 27.29t Elapsed: 00:00:09
Start: Thu Aug 15 10:58:12 2013 End: Thu Aug 15 10:58:21 2013