Query psy6555
Match_columns 178
No_of_seqs 117 out of 1084
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 21:06:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03982 DAGAT: Diacylglycerol 100.0 2.5E-35 5.3E-40 244.1 11.4 162 13-174 95-280 (297)
2 PLN02783 diacylglycerol O-acyl 100.0 6.5E-33 1.4E-37 231.7 12.9 163 12-174 127-299 (315)
3 KOG0831|consensus 100.0 1.2E-30 2.6E-35 214.1 13.2 166 10-175 130-318 (334)
4 cd07987 LPLAT_MGAT-like Lysoph 100.0 1.5E-28 3.3E-33 194.5 13.5 158 12-176 46-210 (212)
5 PRK15018 1-acyl-sn-glycerol-3- 99.9 1.7E-21 3.6E-26 158.0 9.7 125 16-168 89-227 (245)
6 PTZ00261 acyltransferase; Prov 99.8 3.6E-21 7.7E-26 161.6 10.0 128 16-168 157-305 (355)
7 cd07992 LPLAT_AAK14816-like Ly 99.8 2.1E-19 4.5E-24 141.4 8.5 127 13-172 50-201 (203)
8 cd07986 LPLAT_ACT14924-like Ly 99.8 2.8E-19 6.1E-24 141.6 8.6 135 15-165 49-208 (210)
9 PLN02901 1-acyl-sn-glycerol-3- 99.8 1.6E-18 3.6E-23 137.7 10.8 129 13-169 70-209 (214)
10 cd07988 LPLAT_ABO13168-like Ly 99.7 1.4E-17 3E-22 127.3 8.9 94 14-151 46-149 (163)
11 KOG2848|consensus 99.7 1.4E-17 3.1E-22 133.1 9.1 128 15-169 112-251 (276)
12 PRK08633 2-acyl-glycerophospho 99.7 2.7E-17 5.8E-22 156.0 9.6 133 14-166 463-603 (1146)
13 cd07991 LPLAT_LPCAT1-like Lyso 99.7 6.2E-16 1.4E-20 122.5 11.3 139 15-171 45-199 (211)
14 KOG4321|consensus 99.7 1.3E-17 2.8E-22 127.2 1.4 144 15-158 72-216 (279)
15 COG0204 PlsC 1-acyl-sn-glycero 99.6 1.3E-15 2.7E-20 122.3 9.6 106 16-150 90-205 (255)
16 cd07983 LPLAT_DUF374-like Lyso 99.6 4.3E-15 9.2E-20 115.4 11.5 130 15-169 48-187 (189)
17 PRK06814 acylglycerophosphoeth 99.6 1.2E-15 2.7E-20 145.3 8.9 114 15-150 477-597 (1140)
18 PRK08043 bifunctional acyl-[ac 99.6 1.4E-15 3E-20 139.2 8.0 113 16-150 52-171 (718)
19 cd07993 LPLAT_DHAPAT-like Lyso 99.6 2.8E-15 6.2E-20 118.2 5.9 82 15-102 48-150 (205)
20 cd07985 LPLAT_GPAT Lysophospho 99.5 2.8E-14 6.1E-19 114.2 9.4 142 19-174 56-233 (235)
21 PLN02833 glycerol acyltransfer 99.5 9.8E-13 2.1E-17 112.5 12.3 139 19-176 188-343 (376)
22 TIGR00530 AGP_acyltrn 1-acyl-s 99.4 1.1E-13 2.4E-18 100.4 4.9 80 15-100 39-129 (130)
23 cd06551 LPLAT Lysophospholipid 99.4 1.1E-12 2.4E-17 100.8 10.1 119 15-168 53-184 (187)
24 PRK03355 glycerol-3-phosphate 99.4 2.1E-12 4.5E-17 118.6 9.3 145 15-173 294-483 (783)
25 PF01553 Acyltransferase: Acyl 99.3 7.4E-13 1.6E-17 96.3 0.7 80 15-100 41-131 (132)
26 smart00563 PlsC Phosphate acyl 99.3 8.2E-12 1.8E-16 88.5 5.2 82 15-102 25-117 (118)
27 cd07989 LPLAT_AGPAT-like Lysop 99.3 4.1E-11 9E-16 91.9 9.5 111 15-151 47-168 (184)
28 cd07984 LPLAT_LABLAT-like Lyso 99.2 2.4E-10 5.2E-15 88.4 12.0 122 14-170 43-177 (192)
29 PRK04974 glycerol-3-phosphate 99.2 7.1E-11 1.5E-15 109.3 9.6 81 15-101 328-429 (818)
30 PTZ00374 dihydroxyacetone phos 99.1 1.4E-10 2.9E-15 107.8 8.6 82 16-103 657-761 (1108)
31 TIGR03703 plsB glycerol-3-phos 99.1 1.4E-10 3.1E-15 107.2 8.1 120 20-150 323-470 (799)
32 PLN02499 glycerol-3-phosphate 99.1 1.2E-10 2.7E-15 101.9 6.7 132 14-168 310-452 (498)
33 PRK14014 putative acyltransfer 99.1 6.9E-10 1.5E-14 92.6 9.3 89 17-105 115-233 (301)
34 PLN02177 glycerol-3-phosphate 99.1 2.1E-10 4.5E-15 101.5 5.5 132 15-169 324-466 (497)
35 KOG2847|consensus 99.0 9.4E-10 2E-14 88.2 6.1 109 19-150 105-225 (286)
36 PLN02510 probable 1-acyl-sn-gl 98.9 2.2E-08 4.7E-13 85.8 10.9 78 14-101 119-209 (374)
37 PLN02588 glycerol-3-phosphate 98.8 1.1E-08 2.3E-13 89.9 6.6 123 25-168 357-497 (525)
38 COG2121 Uncharacterized protei 98.7 3.2E-07 6.9E-12 71.9 11.0 131 15-171 68-209 (214)
39 PRK11915 glycerol-3-phosphate 98.4 1.6E-06 3.4E-11 78.3 9.3 138 17-172 144-325 (621)
40 cd07990 LPLAT_LCLAT1-like Lyso 98.3 3E-07 6.6E-12 71.6 2.5 75 15-99 52-139 (193)
41 PRK08419 lipid A biosynthesis 98.0 5.1E-05 1.1E-09 63.0 9.6 121 16-171 138-272 (298)
42 PLN02380 1-acyl-sn-glycerol-3- 98.0 4.9E-06 1.1E-10 71.5 3.2 52 16-67 113-177 (376)
43 PRK07920 lipid A biosynthesis 97.7 0.00017 3.6E-09 60.1 8.2 53 47-102 175-231 (298)
44 PF03279 Lip_A_acyltrans: Bact 97.1 0.0034 7.3E-08 51.9 8.9 91 46-169 183-278 (295)
45 PRK05646 lipid A biosynthesis 96.8 0.01 2.2E-07 49.6 9.3 72 27-101 157-242 (310)
46 PRK06553 lipid A biosynthesis 96.8 0.0089 1.9E-07 50.0 8.5 72 27-101 168-251 (308)
47 PRK06946 lipid A biosynthesis 96.7 0.012 2.7E-07 48.7 8.9 72 27-101 145-229 (293)
48 PRK08943 lipid A biosynthesis 96.6 0.015 3.2E-07 48.8 8.9 53 46-101 193-250 (314)
49 PRK06628 lipid A biosynthesis 96.5 0.022 4.8E-07 47.2 9.4 72 27-101 149-232 (290)
50 PRK06860 lipid A biosynthesis 96.5 0.017 3.7E-07 48.3 8.7 112 27-170 160-283 (309)
51 TIGR02207 lipid_A_htrB lipid A 96.5 0.02 4.3E-07 47.6 9.0 52 47-101 181-238 (303)
52 PRK08733 lipid A biosynthesis 96.4 0.021 4.5E-07 47.7 8.6 72 27-101 160-243 (306)
53 PRK05906 lipid A biosynthesis 96.2 0.029 6.2E-07 49.6 8.8 71 27-101 174-257 (454)
54 TIGR02208 lipid_A_msbB lipid A 96.2 0.036 7.8E-07 46.2 9.0 52 47-101 185-241 (305)
55 COG1560 HtrB Lauroyl/myristoyl 96.1 0.059 1.3E-06 45.3 9.6 111 27-170 158-282 (308)
56 PRK08706 lipid A biosynthesis 96.1 0.051 1.1E-06 44.9 9.2 52 47-101 169-226 (289)
57 PRK08734 lipid A biosynthesis 95.9 0.067 1.5E-06 44.6 9.2 72 27-101 147-232 (305)
58 PRK08905 lipid A biosynthesis 95.8 0.071 1.5E-06 44.1 8.7 72 27-101 135-220 (289)
59 PRK08025 lipid A biosynthesis 95.7 0.075 1.6E-06 44.3 8.6 73 27-101 158-242 (305)
60 COG2937 PlsB Glycerol-3-phosph 95.1 0.042 9.2E-07 50.6 5.5 80 21-107 328-428 (810)
61 KOG1505|consensus 94.9 0.0059 1.3E-07 52.1 -0.6 50 16-65 100-162 (346)
62 COG3176 Putative hemolysin [Ge 94.6 0.033 7.1E-07 46.4 3.1 63 46-110 148-210 (292)
63 PRK05645 lipid A biosynthesis 94.5 0.29 6.3E-06 40.5 8.8 72 27-101 146-231 (295)
64 PRK15174 Vi polysaccharide exp 94.3 0.25 5.5E-06 45.5 8.7 53 46-101 537-593 (656)
65 KOG3730|consensus 94.0 0.48 1E-05 42.1 9.1 122 13-150 174-331 (685)
66 PLN02349 glycerol-3-phosphate 93.1 0.23 4.9E-06 43.1 5.6 90 48-150 287-384 (426)
67 KOG3729|consensus 92.6 0.25 5.5E-06 44.4 5.3 77 19-101 188-291 (715)
68 KOG2898|consensus 72.5 37 0.00081 29.2 9.0 105 55-176 212-318 (354)
69 COG0528 PyrH Uridylate kinase 64.3 14 0.0003 30.0 4.5 62 39-110 110-171 (238)
70 COG0816 Predicted endonuclease 61.5 17 0.00037 27.1 4.3 38 137-176 53-90 (141)
71 COG3411 Ferredoxin [Energy pro 52.4 9.7 0.00021 24.5 1.5 25 40-64 3-27 (64)
72 COG4365 Uncharacterized protei 51.9 22 0.00047 31.5 3.9 65 31-101 59-129 (537)
73 PF04028 DUF374: Domain of unk 46.1 45 0.00098 21.9 4.0 53 14-66 9-71 (74)
74 TIGR00250 RNAse_H_YqgF RNAse H 44.8 53 0.0011 23.9 4.6 38 137-176 48-85 (130)
75 PF03652 UPF0081: Uncharacteri 41.5 26 0.00057 25.7 2.6 38 137-176 51-89 (135)
76 PF13865 FoP_duplication: C-te 38.3 45 0.00098 21.8 3.1 23 151-173 38-60 (74)
77 PF00875 DNA_photolyase: DNA p 38.2 52 0.0011 24.4 3.8 21 85-105 17-37 (165)
78 PRK00109 Holliday junction res 37.3 78 0.0017 23.2 4.6 38 137-176 54-91 (138)
79 PRK05783 hypothetical protein; 35.7 41 0.00088 22.8 2.6 33 137-169 34-67 (84)
80 PRK02289 4-oxalocrotonate taut 32.3 87 0.0019 19.2 3.6 27 151-177 10-36 (60)
81 PRK14556 pyrH uridylate kinase 29.0 86 0.0019 25.6 3.9 56 43-109 125-180 (249)
82 PHA01346 hypothetical protein 27.8 1.1E+02 0.0024 18.1 3.1 24 151-174 30-53 (53)
83 TIGR03556 photolyase_8HDF deox 27.2 70 0.0015 28.4 3.3 18 87-104 21-38 (471)
84 COG4261 Predicted acyltransfer 26.6 3.8E+02 0.0082 22.3 7.9 72 93-170 207-282 (309)
85 TIGR00591 phr2 photolyase PhrI 25.6 90 0.0019 27.4 3.7 13 91-103 51-63 (454)
86 PRK00304 hypothetical protein; 24.9 80 0.0017 21.0 2.4 22 45-66 39-60 (75)
87 PF06794 UPF0270: Uncharacteri 24.8 82 0.0018 20.6 2.5 22 44-65 39-60 (70)
88 PRK00745 4-oxalocrotonate taut 24.0 1.4E+02 0.003 18.1 3.4 26 152-177 11-36 (62)
89 PRK04966 hypothetical protein; 23.7 87 0.0019 20.6 2.4 23 44-66 39-61 (72)
90 COG1828 PurS Phosphoribosylfor 23.1 1E+02 0.0023 20.8 2.8 36 136-171 32-68 (83)
91 TIGR02765 crypto_DASH cryptoch 20.4 1.1E+02 0.0023 26.7 3.1 18 87-104 21-38 (429)
92 cd07571 ALP_N-acyl_transferase 20.3 71 0.0015 25.8 1.9 45 50-99 35-79 (270)
93 PRK02079 pyrroloquinoline quin 20.3 61 0.0013 22.0 1.2 15 52-66 19-33 (88)
94 PF02700 PurS: Phosphoribosylf 20.2 1.2E+02 0.0026 20.1 2.7 35 135-169 30-65 (80)
95 cd00491 4Oxalocrotonate_Tautom 20.0 2E+02 0.0044 16.9 3.6 26 152-177 10-35 (58)
No 1
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=100.00 E-value=2.5e-35 Score=244.13 Aligned_cols=162 Identities=26% Similarity=0.385 Sum_probs=147.7
Q ss_pred CCcceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHHHHhcC---CCeEEEEcCCcccccccC-CceEEeeecccCchhh
Q psy6555 13 PTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCSDILQD---NNIMAISPGGLYEAQLGD-SYYKLMWRRRMGFAKV 87 (178)
Q Consensus 13 ~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~~~L~~---G~~v~IfPeG~r~~~~~~-g~~~l~~~~r~Gf~~l 87 (178)
|++..+.++.+.+| +|++|+++.++|++++|++++..+|++ |++|+|+|||.+|+...+ |.+++.++.|+||+|+
T Consensus 95 pg~~~~~~tl~~~f~~P~~R~~~~~~G~~~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvkl 174 (297)
T PF03982_consen 95 PGIRPHLLTLSVNFRIPFFRDFLLWLGAVSASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKL 174 (297)
T ss_pred CCcceeEEEeccceeccccchhhhhcccccccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHh
Confidence 45667788888899 999999999999999999999999976 556999999999998876 8999999999999999
Q ss_pred hHhcCCCEEeeeecCcccchhccc-----chHHHHHHHHHHcCCCccceec-C-----------CCceeEEEEcccccCC
Q psy6555 88 AIEAKVPIIPIFTRNIRESFRTVG-----WLKSFWNKLYIYTRLPLVPIYG-G-----------FPVKLVTYVGEPIPYD 150 (178)
Q Consensus 88 A~~~g~pIVPv~~~G~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~-~-----------~~~~i~i~vG~PI~~~ 150 (178)
|+++|+|||||+.+||+++|+... +.+++++|+++.+|++++.|+| + ++.+++++||+||+++
T Consensus 175 Al~~Ga~LVPv~~FGE~d~~~~~~~~~~~~~r~~q~~~~~~~g~~~~~f~Grg~f~~~~~gllP~r~pi~~VVG~PI~v~ 254 (297)
T PF03982_consen 175 ALQHGAPLVPVYSFGENDLYDQVQNPPGSWLRRFQRWLKKKFGFSLPLFWGRGIFPSYSFGLLPYRRPITTVVGKPIPVP 254 (297)
T ss_pred HHHcCCcEEeEEEeCChhheeeccCCchhHHHHHHHHHHHHcCcceeeeecccccCCCcccccccCCceEEEeeceeccc
Confidence 999999999999999999999863 5667889999999999998888 2 3578999999999998
Q ss_pred --CCCCHHHHHHHHHHHHHHHHhhhc
Q psy6555 151 --PNLTPEELAKKVMRPKNNYYSLSD 174 (178)
Q Consensus 151 --~~~s~e~v~~~~~~~~~~l~~l~d 174 (178)
++||+|||++.|++++++|++|||
T Consensus 255 ~~~~Pt~e~Vd~~H~~Y~~~L~~LFd 280 (297)
T PF03982_consen 255 KIENPTQEDVDKLHARYIEALRELFD 280 (297)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999987
No 2
>PLN02783 diacylglycerol O-acyltransferase
Probab=100.00 E-value=6.5e-33 Score=231.70 Aligned_cols=163 Identities=21% Similarity=0.267 Sum_probs=140.3
Q ss_pred CCCcceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHHHHhcCCCeEEEEcCCcccccccC-CceEEeeecccCchhhhH
Q psy6555 12 GPTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCSDILQDNNIMAISPGGLYEAQLGD-SYYKLMWRRRMGFAKVAI 89 (178)
Q Consensus 12 ~~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~~~L~~G~~v~IfPeG~r~~~~~~-g~~~l~~~~r~Gf~~lA~ 89 (178)
.|.+.+++++++++| +|++|++++++|++++||+++.+.|++|++|+|||||+||+.... +.+...+++|+||+++|+
T Consensus 127 ~p~~~~~~lak~~lf~iP~~g~~~~~~G~ipv~R~~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~ 206 (315)
T PLN02783 127 LPLPKIRALASSAVFYTPFLRHIWTWLGLDPASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAM 206 (315)
T ss_pred cCCCchHHHhhhhhccCcHHHHHHHHcCCeEEcHHHHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHH
Confidence 455788999999999 999999999999999999999999999999999999999976544 554555689999999999
Q ss_pred hcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecC------CCceeEEEEcccccCC--CCCCHHHHHHH
Q psy6555 90 EAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGG------FPVKLVTYVGEPIPYD--PNLTPEELAKK 161 (178)
Q Consensus 90 ~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~i~i~vG~PI~~~--~~~s~e~v~~~ 161 (178)
++|+|||||+++|++++++.+.....+..++++.+++..+.++|. ++++++++||+||+++ +++|+|++++.
T Consensus 207 ~~g~PIVPv~i~G~~~~~~~~~~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~~~~~~~e~v~~~ 286 (315)
T PLN02783 207 ETGAPLVPVFCFGQTRAYKWWKPGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKKNPQPSQEEVAEV 286 (315)
T ss_pred HcCCCEEEEEEECchhhhhhhcCCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCCCCCCCHHHHHHH
Confidence 999999999999999998865433344456788888876667762 4689999999999997 35688999999
Q ss_pred HHHHHHHHHhhhc
Q psy6555 162 VMRPKNNYYSLSD 174 (178)
Q Consensus 162 ~~~~~~~l~~l~d 174 (178)
++++++++++|+|
T Consensus 287 ~~~~~~al~~L~~ 299 (315)
T PLN02783 287 LEQFVEALQDLFE 299 (315)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999986
No 3
>KOG0831|consensus
Probab=99.97 E-value=1.2e-30 Score=214.09 Aligned_cols=166 Identities=24% Similarity=0.280 Sum_probs=153.2
Q ss_pred ccCCCcceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHHHHhc---CCCeEEEEcCCcccccccC-CceEEeeecccCc
Q psy6555 10 TTGPTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCSDILQ---DNNIMAISPGGLYEAQLGD-SYYKLMWRRRMGF 84 (178)
Q Consensus 10 ~~~~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~~~L~---~G~~v~IfPeG~r~~~~~~-g~~~l~~~~r~Gf 84 (178)
...|.++.+.++....| +|++|+++++.|.+.+|++++...|. +|++|+|.+||+.|+..+. |.+.|.++.|+||
T Consensus 130 ~~fPgi~~~l~tl~~~F~~P~~Re~l~~~Gl~svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~RkGF 209 (334)
T KOG0831|consen 130 KLFPGIRPKLMTLSGQFYTPFLREYLMSLGLCSVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKNRKGF 209 (334)
T ss_pred hhCCCCCHHHcccccceeccHHHHHHHHcCCccccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEeccccH
Confidence 35688889999999999 99999999999999999999999993 3699999999999999887 9999999999999
Q ss_pred hhhhHhcCCCEEeeeecCcccchhcc-----cchHHHHHHHHHHcCCCccceec-C----------CCceeEEEEccccc
Q psy6555 85 AKVAIEAKVPIIPIFTRNIRESFRTV-----GWLKSFWNKLYIYTRLPLVPIYG-G----------FPVKLVTYVGEPIP 148 (178)
Q Consensus 85 ~~lA~~~g~pIVPv~~~G~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~-~----------~~~~i~i~vG~PI~ 148 (178)
+|+|+++|+++||++.+||+++++.. ++.+++|++.++.+|+.++.|+| + ++.++.++||+||+
T Consensus 210 VklAl~tGs~LVP~~sFGE~di~~q~~np~~s~lr~~Q~~~k~~~gf~~~~f~grg~~~~~~gllP~r~pi~~VVG~Pi~ 289 (334)
T KOG0831|consen 210 VKLALQTGASLVPVFSFGENDVYKQVENPKGSRLRKFQEWFKKIFGFTPPIFYGRGFFQYTFGLLPFRRPITTVVGEPIP 289 (334)
T ss_pred HHHHHHhCCCcCceeecccceeeeeecCCCcchhHHHHHHHHHhcCcccceEecccccccccccccccCcceeEecCccC
Confidence 99999999999999999999999887 37889999999999999998888 3 46899999999999
Q ss_pred CC--CCCCHHHHHHHHHHHHHHHHhhhcC
Q psy6555 149 YD--PNLTPEELAKKVMRPKNNYYSLSDI 175 (178)
Q Consensus 149 ~~--~~~s~e~v~~~~~~~~~~l~~l~d~ 175 (178)
++ ++||+|++++.|+.+|++|++|||=
T Consensus 290 v~k~~~Pt~e~id~~H~~y~~~L~~LF~~ 318 (334)
T KOG0831|consen 290 VPKTENPTQEQIDKYHGLYIDALRKLFDE 318 (334)
T ss_pred CccCcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 98 5999999999999999999999973
No 4
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.96 E-value=1.5e-28 Score=194.48 Aligned_cols=158 Identities=30% Similarity=0.493 Sum_probs=127.8
Q ss_pred CCCcceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHHHHhcCCCeEEEEcCCcccccccC-CceEEeeecccCchhhhH
Q psy6555 12 GPTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCSDILQDNNIMAISPGGLYEAQLGD-SYYKLMWRRRMGFAKVAI 89 (178)
Q Consensus 12 ~~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~~~L~~G~~v~IfPeG~r~~~~~~-g~~~l~~~~r~Gf~~lA~ 89 (178)
.+++.+++++++.+| +|+++++++++|+++++++++.+.|++|++|+|||||+|+....+ +.+...+++|+||+++|+
T Consensus 46 ~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r~~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~ 125 (212)
T cd07987 46 FPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLAL 125 (212)
T ss_pred CCCCeeEEeecccceeCccHHHHHHHcCCcccCHHHHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHH
Confidence 466889999999999 999999999999999999999999999999999999999976552 555566799999999999
Q ss_pred hcCCCEEeeeecCcccchhcccchH-HHHHHHHHHcCCCccceecCCCceeEEEEcccccCC----CCCCHHHHHHHHHH
Q psy6555 90 EAKVPIIPIFTRNIRESFRTVGWLK-SFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD----PNLTPEELAKKVMR 164 (178)
Q Consensus 90 ~~g~pIVPv~~~G~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~----~~~s~e~v~~~~~~ 164 (178)
++|+|||||+++|++++++...... .+..+..+ +++++ ++.+++++||+||+++ ++++.|++++.+++
T Consensus 126 ~~~~pIvPv~~~G~~~~~~~~~~~~~~~~~~~~~--~l~~p-----~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~ 198 (212)
T cd07987 126 RAGAPIVPVFTFGEEELFRVLGDPDGPVGKRLFR--LLPLP-----RRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQK 198 (212)
T ss_pred HcCCCeEeEEEeCcHHHHhhhccCCCCceeehhc--eeccC-----CCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999876532100 00001111 11111 4579999999999986 35789999999999
Q ss_pred HHHHHHhhhcCC
Q psy6555 165 PKNNYYSLSDIP 176 (178)
Q Consensus 165 ~~~~l~~l~d~~ 176 (178)
+++++++|+|-.
T Consensus 199 ~~~~l~~l~~~~ 210 (212)
T cd07987 199 YIAALRELIEKH 210 (212)
T ss_pred HHHHHHHHHHHh
Confidence 999999998743
No 5
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=99.86 E-value=1.7e-21 Score=157.97 Aligned_cols=125 Identities=18% Similarity=0.098 Sum_probs=97.2
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHHH----------HHHh-cCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQC----------SDIL-QDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~----------~~~L-~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
...+++|++++ +|+++|+++.+|++++||++. .+.+ ++|.+++|||||||+. +|. + .++|+|
T Consensus 89 ~~~fvaK~el~~~P~~g~~~~~~g~i~VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~---~g~--l-~~Fk~G 162 (245)
T PRK15018 89 PTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSR---GRG--L-LPFKTG 162 (245)
T ss_pred CcEEEEeHHHhhCCHHHHHHHhCCCeEEeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCC---CCC--C-CCccHH
Confidence 45689999999 999999999999999998532 1234 4577899999999963 242 3 389999
Q ss_pred chhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCC--CCCHHHHHHH
Q psy6555 84 FAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDP--NLTPEELAKK 161 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~--~~s~e~v~~~ 161 (178)
++++|+++|+|||||++.|..+.++.. .+ .++++++.||+||++++ ..+.+++.+.
T Consensus 163 a~~lA~~~~~PIvPv~i~g~~~~~~~~--------------~~--------~~g~i~v~~~~PI~~~~~~~~~~~~l~~~ 220 (245)
T PRK15018 163 AFHAAIAAGVPIIPVCVSTTSNKINLN--------------RL--------HNGLVIVEMLPPIDVSQYGKDQVRELAAH 220 (245)
T ss_pred HHHHHHHcCCCEEEEEEECcccccccC--------------Cc--------cCeeEEEEEcCCCcCCCCChhhHHHHHHH
Confidence 999999999999999999986654210 01 46899999999999863 2345677777
Q ss_pred HHHHHHH
Q psy6555 162 VMRPKNN 168 (178)
Q Consensus 162 ~~~~~~~ 168 (178)
+++.+++
T Consensus 221 v~~~i~~ 227 (245)
T PRK15018 221 CRSIMEQ 227 (245)
T ss_pred HHHHHHH
Confidence 7777766
No 6
>PTZ00261 acyltransferase; Provisional
Probab=99.85 E-value=3.6e-21 Score=161.61 Aligned_cols=128 Identities=16% Similarity=0.209 Sum_probs=96.2
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHH-------------------HHHHhcCCCeEEEEcCCcccccccCCceE
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ-------------------CSDILQDNNIMAISPGGLYEAQLGDSYYK 75 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~-------------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~ 75 (178)
.+++++|+++| +|++|+++..+|.+|+++++ +.+.|++|.+++|||||||+. ++. .
T Consensus 157 ~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGTRS~---~gg-~ 232 (355)
T PTZ00261 157 NTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGAINK---HPQ-V 232 (355)
T ss_pred ccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHHHHHHHHHCCCEEEEECCcCCcC---CCC-c
Confidence 56899999999 99999999999999887521 125689999999999999963 221 2
Q ss_pred EeeecccCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcc-cccCCCCCC
Q psy6555 76 LMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGE-PIPYDPNLT 154 (178)
Q Consensus 76 l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~-PI~~~~~~s 154 (178)
+. +||+|++++|+++|+||||+++.|+++.++...+ . . +.++++++.||+ ||+.++ .+
T Consensus 233 L~-pFK~GaF~LAieagvPIVPvai~Gs~~~wP~g~~-------------l--~----~~pg~I~V~iG~~PI~~~~-~~ 291 (355)
T PTZ00261 233 LQ-TFRYGTFATIIKHRMEVYYMVSVGSEKTWPWWMM-------------I--G----GLPADMHIRIGAYPIDYDR-DS 291 (355)
T ss_pred CC-CCcHHHHHHHHHcCCCEEEEEEeChhhcCCCCCc-------------c--C----CCCceEEEEECCCCCCCCC-CC
Confidence 33 8999999999999999999999998877643210 0 0 047899999999 999864 34
Q ss_pred HHHHHHHHHHHHHH
Q psy6555 155 PEELAKKVMRPKNN 168 (178)
Q Consensus 155 ~e~v~~~~~~~~~~ 168 (178)
.+++.+.+++.|++
T Consensus 292 ~~eL~~~lr~lmqe 305 (355)
T PTZ00261 292 SKDVAVGLQQRMQK 305 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 44443333433333
No 7
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.79 E-value=2.1e-19 Score=141.44 Aligned_cols=127 Identities=18% Similarity=0.187 Sum_probs=99.5
Q ss_pred CCcceeeeecCccc-hhhHHHHHHhCCCCcCCHH------------------HHHHHhcCCCeEEEEcCCcccccccCCc
Q psy6555 13 PTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVK------------------QCSDILQDNNIMAISPGGLYEAQLGDSY 73 (178)
Q Consensus 13 ~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~------------------~~~~~L~~G~~v~IfPeG~r~~~~~~g~ 73 (178)
.+..+++++++.++ .|++++++..+|+++++|. .+.+.|++|.+++|||||+++. ++
T Consensus 50 ~~~~~~~v~~~~~~~~p~~~~~~~~~g~ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~---~~- 125 (203)
T cd07992 50 LRRPVRFLAKADLFKNPLIGWLLESFGAIPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHD---RP- 125 (203)
T ss_pred cCCCcEEEEEhhhccchHHHHHHHHcCceEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCC---CC-
Confidence 34678999999999 9999999999999998653 3446689999999999999853 23
Q ss_pred eEEeeecccCchhhhHh------cCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccc
Q psy6555 74 YKLMWRRRMGFAKVAIE------AKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPI 147 (178)
Q Consensus 74 ~~l~~~~r~Gf~~lA~~------~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI 147 (178)
.+ .++++|++++|++ +++|||||++.+..... +++++++.+|+||
T Consensus 126 -~~-~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~~~~~~~---------------------------~~~~i~i~~g~pi 176 (203)
T cd07992 126 -RL-LPLKAGAARMALEALEAGQKDVKIVPVGLNYEDKSR---------------------------FRSRVLVEFGKPI 176 (203)
T ss_pred -Cc-cCcCccHHHHHHHHHhcCCCCCeEEeeeEEeCCCCC---------------------------CCCeEEEEECCCc
Confidence 22 3889999999986 79999999998643210 3579999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhh
Q psy6555 148 PYDPNLTPEELAKKVMRPKNNYYSL 172 (178)
Q Consensus 148 ~~~~~~s~e~v~~~~~~~~~~l~~l 172 (178)
++++..+.|+-.+.++.+.+++.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (203)
T cd07992 177 SVSAFEEAEASRDVEKKLINQLEAE 201 (203)
T ss_pred ccccccccccchhHHHHHHHHHHHh
Confidence 9986556556666666666666553
No 8
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.79 E-value=2.8e-19 Score=141.56 Aligned_cols=135 Identities=19% Similarity=0.151 Sum_probs=94.2
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCH--------------HHHHHHhcCCCeEEEEcCCcccccccC-CceEEee
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTV--------------KQCSDILQDNNIMAISPGGLYEAQLGD-SYYKLMW 78 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r--------------~~~~~~L~~G~~v~IfPeG~r~~~~~~-g~~~l~~ 78 (178)
..+++++++++| +|++++++ +++++ +++.+.|++|++++|||||+|+..... |+..+ .
T Consensus 49 ~~~~~lak~~l~~~p~l~~~~-----i~v~r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~-~ 122 (210)
T cd07986 49 PDVRILANQLLSKIPELRDLF-----IPVDPLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSD-R 122 (210)
T ss_pred CCeEEEeHHhhhhCcchHhhE-----EeccCCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCcccc-C
Confidence 367899999999 99998873 34332 245677899999999999999864332 32222 3
Q ss_pred ecccCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHH------HHHcCCCccceecCCCceeEEEEcccccCCC-
Q psy6555 79 RRRMGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKL------YIYTRLPLVPIYGGFPVKLVTYVGEPIPYDP- 151 (178)
Q Consensus 79 ~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~- 151 (178)
++++|++++|+++|+|||||++.|.++.+.+.. ..++..+ .+.+.. .+.+++++||+||++++
T Consensus 123 ~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~v~v~~g~pI~~~~~ 192 (210)
T cd07986 123 PWNPFVARLARKAKAPVVPVYFSGRNSRLFYLA--GLIHPTLRTLLLPRELLNK--------RGKTIRIRVGRPIPPEEL 192 (210)
T ss_pred CccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHH--HccCHHHHHHHHHHHHHHh--------CCCEEEEEeCCcCCHHHH
Confidence 789999999999999999999999877653311 0100000 000011 46899999999999862
Q ss_pred --CCCHHHHHHHHHHH
Q psy6555 152 --NLTPEELAKKVMRP 165 (178)
Q Consensus 152 --~~s~e~v~~~~~~~ 165 (178)
.+|.+++.+++++.
T Consensus 193 ~~~~~~~~l~~~~~~~ 208 (210)
T cd07986 193 ARFEDAEELADFLRLH 208 (210)
T ss_pred hcCCCHHHHHHHHHHh
Confidence 45677777777653
No 9
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.78 E-value=1.6e-18 Score=137.67 Aligned_cols=129 Identities=17% Similarity=0.126 Sum_probs=100.4
Q ss_pred CCcceeeeecCccc-hhhHHHHHHhCCCCcCCHHH----------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 13 PTLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ----------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 13 ~~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~----------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
...+++++++++++ .|++++++...|+++++|++ +.+.|++|.+++|||||+++. ++. + .+++
T Consensus 70 ~~~~~~~v~k~~l~~~P~~g~~~~~~~~i~v~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~---~~~--~-~~f~ 143 (214)
T PLN02901 70 LGRPFKFISKTSIFLIPIIGWAMYMTGHIPLKRMDRRSQLECLKRCMELLKKGASVFFFPEGTRSK---DGK--L-AAFK 143 (214)
T ss_pred cCCceEEEEEHHhhhccHHHHHHHHCCcEEEecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC---CCc--c-cCch
Confidence 34567899999999 99999999999999997632 345679999999999999852 232 2 2889
Q ss_pred cCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHH
Q psy6555 82 MGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKK 161 (178)
Q Consensus 82 ~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~ 161 (178)
+|++++|.++|+||||+++.|.++.++.-... .. .+.++++.+|+||+.. +.+++.+.
T Consensus 144 ~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~~-----------~~--------~~~~i~v~~~~pi~~~---~~~~l~~~ 201 (214)
T PLN02901 144 KGAFSVAAKTGVPVVPITLVGTGKIMPNGKEG-----------IL--------NPGSVKVVIHPPIEGS---DADELCNE 201 (214)
T ss_pred hhHHHHHHHcCCCEEEEEEecchhhCcCCCcc-----------cc--------cCCeEEEEECCCcCCC---CHHHHHHH
Confidence 99999999999999999999987765421100 00 3578999999999963 56777777
Q ss_pred HHHHHHHH
Q psy6555 162 VMRPKNNY 169 (178)
Q Consensus 162 ~~~~~~~l 169 (178)
+++.|++.
T Consensus 202 ~~~~i~~~ 209 (214)
T PLN02901 202 ARKVIAES 209 (214)
T ss_pred HHHHHHHH
Confidence 77776554
No 10
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.73 E-value=1.4e-17 Score=127.25 Aligned_cols=94 Identities=18% Similarity=0.178 Sum_probs=77.6
Q ss_pred CcceeeeecCccc-hhhHHHHHHhCCCCcCCHHH-------HHHHhcCC--CeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 14 TLTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ-------CSDILQDN--NIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 14 ~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~-------~~~~L~~G--~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
+..+++++|++++ .|+ +++++.+|.++++|++ +.+.+++| .+|+|||||+|+. .+ ++++|
T Consensus 46 ~~~~~~vak~~l~~~p~-g~~~~~~g~i~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~---~~------~fk~G 115 (163)
T cd07988 46 GLKISFLGKHSLFKPPL-GPFMRWLGGIPVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSK---VD------KWKTG 115 (163)
T ss_pred CCceEEEEEHHhhhCcH-HHHHHHcCCEEeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCC---Cc------ChhhH
Confidence 4678899999999 999 9999999999998743 33456654 5799999999863 12 67899
Q ss_pred chhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCC
Q psy6555 84 FAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDP 151 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~ 151 (178)
++++|.++|+||+||++.+. ..+++||+||++++
T Consensus 116 ~~~lA~~~~~PIvPv~i~~~----------------------------------~~~v~~g~pi~~~~ 149 (163)
T cd07988 116 FYHIARGAGVPILLVYLDYK----------------------------------RKTVGIGPLFEPSG 149 (163)
T ss_pred HHHHHHHcCCCEEEEEEecC----------------------------------cEEEEECCcCcCCC
Confidence 99999999999999999752 34789999999864
No 11
>KOG2848|consensus
Probab=99.73 E-value=1.4e-17 Score=133.14 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=96.8
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHH-----------HHhcCCCeEEEEcCCcccccccCCceEEeeeccc
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCS-----------DILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRM 82 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~-----------~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~ 82 (178)
-.|..++|++++ +|+++|.+..+|.+.+||.+-+ +..++...|.+||||||+ .+|. + ++|||
T Consensus 112 ~~cvviaKr~L~yvp~~gl~m~L~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn---~~g~--l-lPFKK 185 (276)
T KOG2848|consen 112 KNCVVIAKRSLFYVPIFGLAMYLSGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRN---KEGR--L-LPFKK 185 (276)
T ss_pred CceEEEEeeeeeecchHHHHHHHcCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccC---CCCc--c-ccccc
Confidence 357789999999 9999999999999998875432 223666899999999995 2353 3 49999
Q ss_pred CchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHH
Q psy6555 83 GFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKV 162 (178)
Q Consensus 83 Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~ 162 (178)
|++.+|.++++|||||.+.+..+.|..-. + . | ..+.+.+.|.+||+.+ ..|.++|++..
T Consensus 186 GAF~lAvqaqVPIVPvv~ssy~~f~~~~~---k---------~-----f---~sG~v~V~vL~pI~Te-glT~ddv~~L~ 244 (276)
T KOG2848|consen 186 GAFHLAVQAQVPIVPVVFSSYGDFYSTKE---K---------V-----F---NSGNVIVRVLPPIPTE-GLTKDDVDVLS 244 (276)
T ss_pred ceeeeehhcCCCEEEEEEecccccccCcc---c---------e-----e---ecceEEEEEcCCCCcc-CCCcccHHHHH
Confidence 99999999999999999998877765321 1 0 1 3589999999999975 45666555554
Q ss_pred HHHHHHH
Q psy6555 163 MRPKNNY 169 (178)
Q Consensus 163 ~~~~~~l 169 (178)
++...++
T Consensus 245 ~~~R~~M 251 (276)
T KOG2848|consen 245 DECRSAM 251 (276)
T ss_pred HHHHHHH
Confidence 4443333
No 12
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.71 E-value=2.7e-17 Score=155.97 Aligned_cols=133 Identities=22% Similarity=0.266 Sum_probs=99.2
Q ss_pred CcceeeeecCccc-hhhHHHHHHhCCCCcCCHH-------HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCch
Q psy6555 14 TLTGSTVLDSNII-FSGLRILGEGLRVIPGTVK-------QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFA 85 (178)
Q Consensus 14 ~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~-------~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~ 85 (178)
++++++++|++++ +|+++++++..|++|++|+ .+.+.|++|++|+|||||||+. ++. +. ++|+|++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~~---~~~--~~-~~~~g~~ 536 (1146)
T PRK08633 463 PRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGGSKESLEFIRKALDDGEVVCIFPEGAITR---NGQ--LN-EFKRGFE 536 (1146)
T ss_pred CCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCChHHHHHHHHHHHhCCCEEEEECCcCCCC---CCC--cc-chhHHHH
Confidence 3567899999999 9999999999999999874 3446789999999999999963 232 32 8899999
Q ss_pred hhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHHHH
Q psy6555 86 KVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVMRP 165 (178)
Q Consensus 86 ~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~~ 165 (178)
++|.++++|||||++.|.++.+........ . .+ ....++.++++.+|+||+.. .+.+++++.+.+.
T Consensus 537 ~~a~~~~~~i~pv~~~g~~~~~~~~~~~~~-~---~~--------~~~~~~~~v~v~~~~pi~~~--~~~~~~~~~~~~l 602 (1146)
T PRK08633 537 LIVKGTDVPIIPFYIRGLWGSIFSRASGKF-L---WR--------WPTRIPYPVTVAFGKPMPAH--STAHEVKQAVFEL 602 (1146)
T ss_pred HHHHHCCCCEEEEEEecccccccccccccc-c---cc--------ccCCCCceEEEEECCCcCcc--cCHHHHHHHHHHH
Confidence 999999999999999987655433211110 0 00 00015688999999999974 4566666666554
Q ss_pred H
Q psy6555 166 K 166 (178)
Q Consensus 166 ~ 166 (178)
.
T Consensus 603 ~ 603 (1146)
T PRK08633 603 S 603 (1146)
T ss_pred H
Confidence 4
No 13
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.67 E-value=6.2e-16 Score=122.46 Aligned_cols=139 Identities=17% Similarity=0.029 Sum_probs=98.5
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHHH----------HHHhc--CCCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQC----------SDILQ--DNNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~----------~~~L~--~G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
...+++++.+++ .|++++++...|.++++|++. .+.++ +|.+|+||||||++. ++ .+ .+|+
T Consensus 45 ~~~~fv~k~el~~~p~~g~~~~~~g~i~v~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~---~~--~l-~~Fk 118 (211)
T cd07991 45 LFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTN---GK--AL-IMFK 118 (211)
T ss_pred cCcEEEEehhhccCcHHHHHHHhCCceEEeCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccC---CC--EE-Eeec
Confidence 456789999999 999999999999999876532 23455 579999999999962 23 33 3889
Q ss_pred cCchhhhHhcCCCEEeeeecCcccchhccc-c-hHHHHHHHHHHcCCCccceecCCCceeEEEEcccccC-CCCCCHHHH
Q psy6555 82 MGFAKVAIEAKVPIIPIFTRNIRESFRTVG-W-LKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPY-DPNLTPEEL 158 (178)
Q Consensus 82 ~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~-~~~~s~e~v 158 (178)
+|++ ++++||+||++.+.+....... + ....+.++.+.+.. .+..+++.+|+||+. .++.+.+++
T Consensus 119 ~gaf----~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------~~~~v~v~~l~pi~~~~~~~~~~~l 186 (211)
T cd07991 119 KGAF----EPGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYLFRLLTQ--------PANVLEVEFLPVYTPSEEGEDPKEF 186 (211)
T ss_pred cccc----cCCCeeEEEEEEecCccCCcccCCCCccHHHHHHHHhCC--------cceEEEEEECCCcccccCCCCHHHH
Confidence 9975 4899999999998765332211 0 00111222222222 468999999999998 455678888
Q ss_pred HHHHHHHHHHHHh
Q psy6555 159 AKKVMRPKNNYYS 171 (178)
Q Consensus 159 ~~~~~~~~~~l~~ 171 (178)
.+.+++.|++...
T Consensus 187 ~~~v~~~i~~~l~ 199 (211)
T cd07991 187 ANRVRLIMANKLG 199 (211)
T ss_pred HHHHHHHHHHhcC
Confidence 8888888877544
No 14
>KOG4321|consensus
Probab=99.67 E-value=1.3e-17 Score=127.16 Aligned_cols=144 Identities=57% Similarity=1.062 Sum_probs=125.9
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHHHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKV 93 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~ 93 (178)
+.++.+.+..+| .|..+.+-.+.-..|.+-++|...|++|+.+.|-|+|..|+.-.+.-|++.|+.+-||++.|+++.+
T Consensus 72 rliytigdrflfklpgwgtiseafhvspgtvqscvsilrdgnllaispggvyeaqfgdhyyellwrnrvgfakvaieaka 151 (279)
T KOG4321|consen 72 RLIYTIGDRFLFKLPGWGTISEAFHVSPGTVQSCVSILRDGNLLAISPGGVYEAQFGDHYYELLWRNRVGFAKVAIEAKA 151 (279)
T ss_pred hheEeecceeEEeCCCccchhhhhccCCccHHHHHHhhccCcEEEEcCCceeeeccchHHHHHHHhccccceeeeeecCC
Confidence 456788889999 9999888877788888889999999999999999999999755456678889999999999999999
Q ss_pred CEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHH
Q psy6555 94 PIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEEL 158 (178)
Q Consensus 94 pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v 158 (178)
||+|++..+..+-+..+.-.+.|..+++++.++|+-|++||+|.++.+..|+||+.+++.|++++
T Consensus 152 piipcftqnlregfrqvgifrtffmrlynkvripvypiyggfpvkfrtylgkpipydenltpqdl 216 (279)
T KOG4321|consen 152 PIIPCFTQNLREGFRQVGIFRTFFMRLYNKVRIPVYPIYGGFPVKFRTYLGKPIPYDENLTPQDL 216 (279)
T ss_pred CccchhHHHHHHHHHHhhHHHHHHHHHhhcccceeeeccCCcceeehhhcCCCCCCCCCCChhhe
Confidence 99999999888777776555667778888899999999999999999999999999888777653
No 15
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.63 E-value=1.3e-15 Score=122.31 Aligned_cols=106 Identities=24% Similarity=0.275 Sum_probs=85.7
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHHH---------HHHhcCCCeEEEEcCCcccccccCCceEEeeecccCch
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQC---------SDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFA 85 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~---------~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~ 85 (178)
.++++++++++ +|+++++++..|+++++|++. ....++|..++|||||||+. +|. .+ .++++|++
T Consensus 90 ~~~f~~k~~l~~~p~~g~~~~~~~~i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~---~~~-~~-~~~k~g~~ 164 (255)
T COG0204 90 PVRFVAKKELFKVPLLGWLLRLLGAIPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSR---GGE-EL-LPFKRGAA 164 (255)
T ss_pred ceEEEeehhhccCchHHHHHHHcCeeEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCC---Ccc-cc-CCCcchHH
Confidence 58899999999 999999999999999987653 22345589999999999963 222 12 38899999
Q ss_pred hhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCC
Q psy6555 86 KVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 86 ~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
++|+++++||+|+++.|.+..+... .+..+.+.+|+||...
T Consensus 165 ~~a~~~~~PivPv~i~g~~~~~~~~------------------------~~~~~~~~~~~pi~~~ 205 (255)
T COG0204 165 RLALEAGVPIVPVAIVGAEELFPSL------------------------KKGKVKVRIGPPIDIS 205 (255)
T ss_pred HHHHHcCCCEEeEEEeCCcccccCC------------------------CceeEEEEecCCcCcc
Confidence 9999999999999999987765321 1223899999999986
No 16
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.63 E-value=4.3e-15 Score=115.37 Aligned_cols=130 Identities=19% Similarity=0.197 Sum_probs=90.1
Q ss_pred cceeeeecCccchhhHHHHHHhCCCCcCCH-------H---HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCc
Q psy6555 15 LTGSTVLDSNIIFSGLRILGEGLRVIPGTV-------K---QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGF 84 (178)
Q Consensus 15 ~~~~~la~~~l~~P~l~~~l~~~G~i~~~r-------~---~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf 84 (178)
.++.++++.....|++++++...|++++++ + .+.+.|++|.+|+|||||+++. .+ ++++|.
T Consensus 48 ~~~~~v~~~~~~~~~~~~~~~~~g~~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~------~~~~G~ 118 (189)
T cd07983 48 KRIAALISRSKDGEIIARVLERLGIRVVRGSSSRGGAAALREMLRALKDGYNIAITPDGPRGP---RY------KVKPGV 118 (189)
T ss_pred CCeEEEEecCcCHHHHHHHHHHhCCCEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCCc---ce------ecchHH
Confidence 466777877544899999999999988853 1 2445779999999999999742 11 678999
Q ss_pred hhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHHH
Q psy6555 85 AKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVMR 164 (178)
Q Consensus 85 ~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~ 164 (178)
++||.++|+|||||++.+..... ..+|.+ +.++. ...+++++||+||++++..+.+++++..++
T Consensus 119 ~~lA~~~~~pIvPv~i~~~~~~~-~~~~~~---------~~~p~------~~~~~~v~~~~pi~~~~~~~~~~~~~~~~~ 182 (189)
T cd07983 119 ILLARKSGAPIVPVAIAASRAWR-LKSWDR---------FIIPK------PFSRVVIVFGEPIHVPPDADEEELEEYRLE 182 (189)
T ss_pred HHHHHHhCCCEEEEEEEEEccEe-ccCccc---------cccCC------CCcceEEEEeCCEeeCCCCCHHHHHHHHHH
Confidence 99999999999999998865421 111100 01110 125799999999998755555555555544
Q ss_pred HHHHH
Q psy6555 165 PKNNY 169 (178)
Q Consensus 165 ~~~~l 169 (178)
+.+.+
T Consensus 183 ~~~~~ 187 (189)
T cd07983 183 LEAAL 187 (189)
T ss_pred HHHHh
Confidence 44443
No 17
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.61 E-value=1.2e-15 Score=145.27 Aligned_cols=114 Identities=12% Similarity=0.085 Sum_probs=89.4
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhh
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKV 87 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~l 87 (178)
.++++++|++++ .|+++++++..|++++||++ +.+.|++|++|+|||||||+. +|. + .++|+|++++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~l~~g~~~~ifPeGtr~~---~~~--~-~~f~~g~~~~ 550 (1140)
T PRK06814 477 EEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNPMATRTLIKEVQKGEKLVIFPEGRITV---TGS--L-MKIYDGPGMI 550 (1140)
T ss_pred CCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCChHHHHHHHHHHHCCCEEEEeCCCCCCC---CCC--c-cccchHHHHH
Confidence 457899999999 99999999999999998754 346789999999999999963 342 3 2899999999
Q ss_pred hHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCC
Q psy6555 88 AIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 88 A~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
|.++++||+||++.|.++...... .+ .. ...++.++++.+|+||+..
T Consensus 551 a~~~~~~i~pv~i~g~~~~~~~~~---------~~--~~-----~~~~~~~~~~~~~~~i~~~ 597 (1140)
T PRK06814 551 ADKAGAMVVPVRIDGLQFTHFSRL---------KN--QV-----RRKWFPKVTVTILPPVKLA 597 (1140)
T ss_pred HHHCCCCEEEEEEcCccccccccc---------CC--Cc-----ccccCCceEEEecCCcccC
Confidence 999999999999999876532210 00 00 0003468999999999876
No 18
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.61 E-value=1.4e-15 Score=139.22 Aligned_cols=113 Identities=14% Similarity=0.113 Sum_probs=85.5
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHH------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhh
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVA 88 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA 88 (178)
...+++|.+++ .|+++++++..|+++++|++ +.+.|++|.+|+|||||||+. +|. + .++++|++++|
T Consensus 52 ~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~~~l~~g~~~~iFPEGtr~~---~~~--~-~~~k~G~~~~a 125 (718)
T PRK08043 52 RPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKPMAIKHLVRLVEQGRPVVIFPEGRITV---TGS--L-MKIYDGAGFVA 125 (718)
T ss_pred CeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCHHHHHHHHHHHhCCCEEEEeCCCccCC---CCC--c-cCcchHHHHHH
Confidence 45689999999 99999999999999998654 446689999999999999962 342 2 38999999999
Q ss_pred HhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCC
Q psy6555 89 IEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 89 ~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
+++|+|||||++.|.+..... .. . +. +......++.+.+|+|++..
T Consensus 126 ~~~~~pivPv~i~g~~~~~~~--~~-------~---~~----~~~~~~~~i~~~~~~p~~~~ 171 (718)
T PRK08043 126 AKSGATVIPVRIEGAELTHFS--RL-------K---GL----VKRRLFPQITLHILPPTQLP 171 (718)
T ss_pred HHCCCCEEEEEEECCccCccc--cc-------C---Cc----cccccCCceEEEecCcccCC
Confidence 999999999999987653110 00 0 00 00002457999999998764
No 19
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.57 E-value=2.8e-15 Score=118.24 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=67.5
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH-------------HHHHhcCCCeEEEEcCCcccccccCCceEEeeec
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ-------------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRR 80 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~-------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~ 80 (178)
.+.+++++.+.+ .|+++++++.+|+++++|++ +.+.|++|.+|+|||||||+. +|. +. ++
T Consensus 48 ~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~g~~l~iFPEGtrs~---~g~--~~-~~ 121 (205)
T cd07993 48 LPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKNGQPLEFFIEGTRSR---TGK--LL-PP 121 (205)
T ss_pred CCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhCCceEEEEcCCCCCC---CCC--cc-ch
Confidence 345678888888 99999999999999987642 235689999999999999963 242 32 88
Q ss_pred ccCchhhhHhc-------CCCEEeeeecC
Q psy6555 81 RMGFAKVAIEA-------KVPIIPIFTRN 102 (178)
Q Consensus 81 r~Gf~~lA~~~-------g~pIVPv~~~G 102 (178)
+.|++++|+++ ++|||||++.-
T Consensus 122 k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y 150 (205)
T cd07993 122 KLGLLSVVVEAYLKGSVPDVLIVPVSISY 150 (205)
T ss_pred HHHHHHHHHHHHhhCCCCCeEEEEeEEee
Confidence 99999999988 89999999973
No 20
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.55 E-value=2.8e-14 Score=114.23 Aligned_cols=142 Identities=13% Similarity=0.079 Sum_probs=91.7
Q ss_pred eeecCccc-hhhHHHHHHhCCCCcCCHHH----------------------HHHHhcCCCe-EEEEcCCcccccccCCce
Q psy6555 19 TVLDSNII-FSGLRILGEGLRVIPGTVKQ----------------------CSDILQDNNI-MAISPGGLYEAQLGDSYY 74 (178)
Q Consensus 19 ~la~~~l~-~P~l~~~l~~~G~i~~~r~~----------------------~~~~L~~G~~-v~IfPeG~r~~~~~~g~~ 74 (178)
|++.+..+ .|++++++++.|.+++++.. +.+.|++|.. ++|||||||+....+|+-
T Consensus 56 f~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~ 135 (235)
T cd07985 56 YVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDPPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEW 135 (235)
T ss_pred eeccccccccHhHHHHHhhCCceeeecCcccccchhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCc
Confidence 44444445 79999999999999986543 2345799877 889999999865444421
Q ss_pred EEeeecc----cCchhhhHhcCCC--EEeeeecCcccchhccc-chHHHHHHHHHHcCCCccceecCCCceeEEEEcccc
Q psy6555 75 KLMWRRR----MGFAKVAIEAKVP--IIPIFTRNIRESFRTVG-WLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPI 147 (178)
Q Consensus 75 ~l~~~~r----~Gf~~lA~~~g~p--IVPv~~~G~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI 147 (178)
.-. +|. .+|.+||.++|+| |+|+++. +.++++.-. +-. .+.+. +. + .++++.+.||+||
T Consensus 136 ~p~-~Fd~~~~~~~~~La~~s~~p~hi~Plai~-~ydi~Ppp~~v~~----~ige~-r~--~-----~f~~v~i~vg~~i 201 (235)
T cd07985 136 YPD-PFDPSAVEMMRLLAQKSRVPTHLYPMALL-TYDIMPPPKQVEK----EIGEK-RA--V-----AFTGVGLAVGEEI 201 (235)
T ss_pred cCC-ccchHHHHHHHHHHHhcCCCceEEeeEEE-eecccCCCccccc----ccccc-cc--c-----cccceEEEecCCc
Confidence 100 122 3477999999999 9999999 555554321 110 00000 00 1 3579999999999
Q ss_pred cCCC----CCC-HHHHHHHHHHHHHHHHhhhc
Q psy6555 148 PYDP----NLT-PEELAKKVMRPKNNYYSLSD 174 (178)
Q Consensus 148 ~~~~----~~s-~e~v~~~~~~~~~~l~~l~d 174 (178)
+..+ ..+ .++-++..+.+.++++++|+
T Consensus 202 ~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 202 DFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred cchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 9873 122 45555666666777777664
No 21
>PLN02833 glycerol acyltransferase family protein
Probab=99.45 E-value=9.8e-13 Score=112.49 Aligned_cols=139 Identities=20% Similarity=0.174 Sum_probs=96.3
Q ss_pred eeecCccc-hhhH-HHHHHhCCCCcCCHHHH------HHH----hc--CCCeEEEEcCCcccccccCCceEEeeecccCc
Q psy6555 19 TVLDSNII-FSGL-RILGEGLRVIPGTVKQC------SDI----LQ--DNNIMAISPGGLYEAQLGDSYYKLMWRRRMGF 84 (178)
Q Consensus 19 ~la~~~l~-~P~l-~~~l~~~G~i~~~r~~~------~~~----L~--~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf 84 (178)
+++++... .+++ +++++..|+++++|++. .+. ++ +|.+|+|||||||+. +. .+ .+||+|+
T Consensus 188 ~v~kk~~~~~~~~~~~~~~~~g~I~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~----~~-~l-~~FK~Ga 261 (376)
T PLN02833 188 VIMQKHPGWVGFLQNTILESVGCIWFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVN----NE-YT-VMFKKGA 261 (376)
T ss_pred EEEEehhhhhHHHHHHHHHHcCcEEecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----CC-cc-cccchhh
Confidence 45565555 6554 68899999999876431 122 33 799999999999853 22 23 3899996
Q ss_pred hhhhHhcCCCEEeeeecCcccchhcccch---HHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHH
Q psy6555 85 AKVAIEAKVPIIPIFTRNIRESFRTVGWL---KSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKK 161 (178)
Q Consensus 85 ~~lA~~~g~pIVPv~~~G~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~ 161 (178)
+ +.|+||+||++.......+. .|. ..+.+++.+.+.. ++..+.+.+++||+..++.|.+++.++
T Consensus 262 f----~~g~pI~PVaI~y~~~~~~~-fW~s~~~s~~~~l~~ll~~--------~~~~v~V~~LpPi~~~~~e~~~efA~r 328 (376)
T PLN02833 262 F----ELGCTVCPIAIKYNKIFVDA-FWNSRKQSFTMHLLRLMTS--------WAVVCDVWYLEPQTLRPGETPIEFAER 328 (376)
T ss_pred H----hcCCeEEEEEEEecCccccc-ccCCCCccHHHhHHHHhCC--------CceEEEEEECCCcCCCCCCCHHHHHHH
Confidence 5 46999999999755322111 121 1233444444433 467899999999998766789999999
Q ss_pred HHHHHHHHHhhhcCC
Q psy6555 162 VMRPKNNYYSLSDIP 176 (178)
Q Consensus 162 ~~~~~~~l~~l~d~~ 176 (178)
+++.|++-..+-|+|
T Consensus 329 v~~~Ia~~lgi~~~~ 343 (376)
T PLN02833 329 VRDMIAKRAGLKKVP 343 (376)
T ss_pred HHHHHHHhcCCCCCC
Confidence 999998888877766
No 22
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.44 E-value=1.1e-13 Score=100.42 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=68.3
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH----------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ----------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~----------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
..+++++++.++ .|++++++...|++++++.+ +.+.|++|.+++|||||+++. .+. ..++++|
T Consensus 39 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~~---~~~---~~~f~~g 112 (130)
T TIGR00530 39 PPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAIATALKAAIEVLKQGRSIGVFPEGTRSR---GRD---ILPFKKG 112 (130)
T ss_pred CCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC---CCC---CCCcchh
Confidence 467899999999 99999999999999987543 456789999999999999863 232 2388999
Q ss_pred chhhhHhcCCCEEeeee
Q psy6555 84 FAKVAIEAKVPIIPIFT 100 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~ 100 (178)
++++|.++|+|||||++
T Consensus 113 ~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 113 AFHIAIKAGVPILPVVL 129 (130)
T ss_pred HHHHHHHcCCCEEeEEe
Confidence 99999999999999986
No 23
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.43 E-value=1.1e-12 Score=100.84 Aligned_cols=119 Identities=23% Similarity=0.307 Sum_probs=85.2
Q ss_pred cceeeeecCccc--hhhHHHHHHhCCCCcCCH----------HHHHHHhcC-CCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 15 LTGSTVLDSNII--FSGLRILGEGLRVIPGTV----------KQCSDILQD-NNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 15 ~~~~~la~~~l~--~P~l~~~l~~~G~i~~~r----------~~~~~~L~~-G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
..+++++++..+ .|+++ +.|.+++++ +.+.+.|++ |..++|||||+++... +. . .+++
T Consensus 53 ~~~~~v~~~~~~~~~~~~~----~~g~~~i~r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~--~~--~-~~~~ 123 (187)
T cd06551 53 RDVYGLMDEELLERYPFFT----RLGAFSVDRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRD--KR--P-LQFK 123 (187)
T ss_pred CCeEEEEcHhhhhhChHHh----hcCeEEecCCChhhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCC--CC--c-cccc
Confidence 456667766654 45544 448888764 124456788 9999999999986321 11 2 3779
Q ss_pred cCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHH
Q psy6555 82 MGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKK 161 (178)
Q Consensus 82 ~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~ 161 (178)
+|++++|.++++||||+++.+.++.+. ...++++.+|+||..++..+.|...+.
T Consensus 124 ~g~~~la~~~~~~IvPv~i~~~~~~~~--------------------------~~~~~~i~~~~pi~~~~~~~~~~~~~~ 177 (187)
T cd06551 124 PGVAHLAEKAGVPIVPVALRYTFELFE--------------------------QFPEIFVRIGPPIPYAETALGEELAAE 177 (187)
T ss_pred chHHHHHHHcCCcEEEEEEeccccccC--------------------------CCCcEEEEECCCccccccccHHHHHHH
Confidence 999999999999999999998755420 346899999999999866666666555
Q ss_pred HHHHHHH
Q psy6555 162 VMRPKNN 168 (178)
Q Consensus 162 ~~~~~~~ 168 (178)
..+.+++
T Consensus 178 ~~~~~~~ 184 (187)
T cd06551 178 LANRLTR 184 (187)
T ss_pred HHHHHHH
Confidence 5555544
No 24
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.37 E-value=2.1e-12 Score=118.61 Aligned_cols=145 Identities=11% Similarity=0.021 Sum_probs=93.7
Q ss_pred cceeeeecCccchhhHHHHHHhCCCCcCCHHH-------------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 15 LTGSTVLDSNIIFSGLRILGEGLRVIPGTVKQ-------------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 15 ~~~~~la~~~l~~P~l~~~l~~~G~i~~~r~~-------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
...+++++..+++|+++++++.+|+++++|+. ....+++|.++.+||||||+. +|+ + .++|
T Consensus 294 ~~~~i~Ag~~L~~~~lG~llr~~Ga~fIrR~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSr---tGk--L-l~pK 367 (783)
T PRK03355 294 PPVHVFGGINLSFGPMGPIMRRSGMIFIRRNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSR---TGK--L-LPPK 367 (783)
T ss_pred CCcEEEeHHHhccHHHHHHHHHcCcEEecCCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCCC---CCC--C-Cccc
Confidence 34566777776688899999999999987742 112347899999999999973 463 3 3899
Q ss_pred cCchhhhH-------hcCCCEEeeeec-------Ccccchhcc----c-chHHHHHHHHHHcCCCccceecCCCceeEEE
Q psy6555 82 MGFAKVAI-------EAKVPIIPIFTR-------NIRESFRTV----G-WLKSFWNKLYIYTRLPLVPIYGGFPVKLVTY 142 (178)
Q Consensus 82 ~Gf~~lA~-------~~g~pIVPv~~~-------G~~~~~~~~----~-~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~ 142 (178)
.|..++++ +++++||||++. |+....... . ...++.+.. +.++-+ ..+++++.
T Consensus 368 ~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~~~y~~e~~G~~k~~esl~~~~~~~-~~l~~~-------~~G~i~V~ 439 (783)
T PRK03355 368 LGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEIGEYAAEARGGEKTPEGLRWLYNYI-KAQGER-------NYGKIYVR 439 (783)
T ss_pred ccHHHHHHHHHHhcccCCCEEEEEEEEecccccchhHHHHhcCCCcccccHHHHHHHH-HHhccC-------CceeEEEE
Confidence 99877765 579999999996 321100000 0 001111111 111110 23899999
Q ss_pred EcccccCCC---C----------CCHHHHHHHHHHHHHHHHhhh
Q psy6555 143 VGEPIPYDP---N----------LTPEELAKKVMRPKNNYYSLS 173 (178)
Q Consensus 143 vG~PI~~~~---~----------~s~e~v~~~~~~~~~~l~~l~ 173 (178)
||+||+..+ . .+.+.+++...++|.++++..
T Consensus 440 fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~~~ 483 (783)
T PRK03355 440 FGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQVT 483 (783)
T ss_pred ECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHhcC
Confidence 999999872 1 123457777788888887643
No 25
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.28 E-value=7.4e-13 Score=96.27 Aligned_cols=80 Identities=24% Similarity=0.316 Sum_probs=46.0
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHH----------HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVK----------QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~----------~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
..+++++++.++ .|++++++..+|.++++|. .+.+.+++|..++|||||++... + .+ .++++|
T Consensus 41 ~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~---~--~~-~~~~~G 114 (132)
T PF01553_consen 41 RRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRKKNRKALKDIKEILRKGGSIVIFPEGTRSRS---G--EL-LPFKKG 114 (132)
T ss_dssp HH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHHHHHHHHHHHHHHHHC---EEE-TT-S---B-------B-----HH
T ss_pred ccceeEeeeccccchhhhhhhhhccceeeeeecccccchhHHHHHHHhhhcceeeecCCccCcCC---C--cc-CCccHH
Confidence 567899999999 9999999999999999882 34457899999999999998531 2 23 488999
Q ss_pred chhhhHhcCCCEEeeee
Q psy6555 84 FAKVAIEAKVPIIPIFT 100 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~ 100 (178)
++++|.+++++||||++
T Consensus 115 ~~~~a~~~~~~ivPv~i 131 (132)
T PF01553_consen 115 AFHIALKAKVPIVPVAI 131 (132)
T ss_dssp HHHHHHHH---------
T ss_pred HHHHHHHcCCccccccC
Confidence 99999999999999987
No 26
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.26 E-value=8.2e-12 Score=88.46 Aligned_cols=82 Identities=27% Similarity=0.282 Sum_probs=67.4
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH----------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ----------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~----------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
...++++++.++ .|++++++.+.|.+++++.. +.+.+++|..++|||||++... . .+ .++++|
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ifPeG~~~~~---~--~~-~~~~~g 98 (118)
T smart00563 25 GRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLIFPEGTRSRP---G--KL-LPFKKG 98 (118)
T ss_pred CceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEEeCCcccCCC---C--Cc-CCCccc
Confidence 357789999999 99999999999999876432 2346789999999999998532 2 22 378999
Q ss_pred chhhhHhcCCCEEeeeecC
Q psy6555 84 FAKVAIEAKVPIIPIFTRN 102 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~~G 102 (178)
++++|.+++++|+|+++.+
T Consensus 99 ~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 99 AARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHHHHHHcCCCEEeEEEec
Confidence 9999999999999999865
No 27
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.25 E-value=4.1e-11 Score=91.94 Aligned_cols=111 Identities=23% Similarity=0.257 Sum_probs=85.7
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCH-------HH---HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTV-------KQ---CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r-------~~---~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
..+++++++..+ .|++++++.+.|++++++ +. +.+.+++|+.+++||||+++.. +. ..+++.|
T Consensus 47 ~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~---~~---~~~~~~g 120 (184)
T cd07989 47 RPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGRSAREALREAIEALKEGESVVIFPEGTRSRD---GE---LLPFKSG 120 (184)
T ss_pred CceEEEEhHHhhhCchHHHHHHHCCeEEEecCCchhHHHHHHHHHHHHHCCCEEEEecCcccCCC---CC---cCCCccc
Confidence 456789999888 999999999999988753 22 3456799999999999998632 22 2388999
Q ss_pred chhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCC
Q psy6555 84 FAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDP 151 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~ 151 (178)
.+++|.++++||+|+++.+.+..+... . .. ....++++.+|+||+.++
T Consensus 121 ~~~lA~~~~~~Vvpv~~~~~~~~~~~~---------------~-~~----~~~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 121 AFRLAKEAGVPIVPVAISGTWGSLPKG---------------K-KL----PRPGRVTVRIGEPIPPEG 168 (184)
T ss_pred HHHHHHHcCCCEEeEEEeChhhhCcCC---------------C-Cc----CCCCcEEEEEcCCcChhh
Confidence 999999999999999999876654321 0 00 035789999999999863
No 28
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.21 E-value=2.4e-10 Score=88.36 Aligned_cols=122 Identities=14% Similarity=0.063 Sum_probs=85.6
Q ss_pred CcceeeeecCccchhhHHHHHHh----CCCCcCCH----HHHHHHhcCCCeEEEEcCCcccccccCCceEE-----eeec
Q psy6555 14 TLTGSTVLDSNIIFSGLRILGEG----LRVIPGTV----KQCSDILQDNNIMAISPGGLYEAQLGDSYYKL-----MWRR 80 (178)
Q Consensus 14 ~~~~~~la~~~l~~P~l~~~l~~----~G~i~~~r----~~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l-----~~~~ 80 (178)
..++.++.++. ..|.+.+++.. .|+..+++ .++.++|++|+.|+|||||+++... + ..+ ..++
T Consensus 43 ~~~~~~v~~~~-~~~~~~~~~~~~r~~~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~~~~~~--~-~~~~F~G~~~~~ 118 (192)
T cd07984 43 GYPVTVVYRPL-KNPLLDRLITRGRERFGARLIPRGGGLRELIRALKKGEIVGILPDQDPGRKG--G-VFVPFFGRPAAT 118 (192)
T ss_pred CCCeeEEEECC-CCHHHHHHHHHHHHhcCCeeEcCCchHHHHHHHHhCCCEEEEEeCCCCCCCC--C-EEeccCCCCccc
Confidence 34566777662 37778777763 57666654 3456778999999999999986321 1 111 1155
Q ss_pred ccCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHH
Q psy6555 81 RMGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAK 160 (178)
Q Consensus 81 r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~ 160 (178)
+.|+.+||.++|+||||+++.++ -++++++.+|+||+.....+.+++.+
T Consensus 119 ~~G~~~lA~~~~~pivp~~~~~~-------------------------------~~~~~~i~~~~~i~~~~~~~~~~~~~ 167 (192)
T cd07984 119 PTGPARLALKTGAPVVPAFAYRL-------------------------------PGGGYRIEFEPPLENPPSEDVEEDTQ 167 (192)
T ss_pred hHHHHHHHHHHCCcEEEEEEEEc-------------------------------CCCCEEEEEeCCCCCCCCCCHHHHHH
Confidence 89999999999999999999653 13578999999999865556666666
Q ss_pred HHHHHHHHHH
Q psy6555 161 KVMRPKNNYY 170 (178)
Q Consensus 161 ~~~~~~~~l~ 170 (178)
.+.+.++++.
T Consensus 168 ~~~~~lE~~i 177 (192)
T cd07984 168 RLNDALEAAI 177 (192)
T ss_pred HHHHHHHHHH
Confidence 6666665553
No 29
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.20 E-value=7.1e-11 Score=109.32 Aligned_cols=81 Identities=9% Similarity=0.100 Sum_probs=64.8
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH-------------HHHHhcCCCeEEEEcCCcccccccCCceEEeeec
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ-------------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRR 80 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~-------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~ 80 (178)
..+.++|+...+ +|+++++++..|+++++|+. +.+.+++|.+|.|||||+|+. +|+ +. ++
T Consensus 328 l~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSR---tGk--ll-pp 401 (818)
T PRK04974 328 LVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRSR---TGR--LL-QP 401 (818)
T ss_pred CCCceEEehHHhcchHHHHHHHHCCceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcCC---CCC--Cc-ch
Confidence 334466777778 99999999999999987642 124679999999999999973 463 32 88
Q ss_pred ccCchhhhHhc-------CCCEEeeeec
Q psy6555 81 RMGFAKVAIEA-------KVPIIPIFTR 101 (178)
Q Consensus 81 r~Gf~~lA~~~-------g~pIVPv~~~ 101 (178)
+.|...+|+++ +++||||++.
T Consensus 402 K~G~l~~a~~a~~~~~~~dv~IVPVsIs 429 (818)
T PRK04974 402 KTGMLAMTLQAMLRGSRRPITLVPVYIG 429 (818)
T ss_pred hhhHHHHHHHHhhcccCCCcEEEEEEEe
Confidence 99999999987 4899999983
No 30
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.14 E-value=1.4e-10 Score=107.81 Aligned_cols=82 Identities=11% Similarity=0.093 Sum_probs=67.5
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHH-------------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ-------------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~-------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
..++++++.++ +|+++++++..|+++++|+. +.+.|++|.++.+||||+|+. +|+ + .+.|
T Consensus 657 ~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~sVeiFpEGTRSR---TGK--L-LpPK 730 (1108)
T PTZ00374 657 LPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRRPLEFFIEGTRSR---TGK--T-MAPK 730 (1108)
T ss_pred ceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCCeEEEecCcCcCC---CCC--c-ccch
Confidence 34789999999 99999999999999986542 234579999999999999973 463 2 2779
Q ss_pred cCchhhhHhc---------CCCEEeeeecCc
Q psy6555 82 MGFAKVAIEA---------KVPIIPIFTRNI 103 (178)
Q Consensus 82 ~Gf~~lA~~~---------g~pIVPv~~~G~ 103 (178)
.|..++++++ +++||||++.-+
T Consensus 731 ~GlLkmalda~l~g~~~v~dV~IVPVSIsYE 761 (1108)
T PTZ00374 731 LGLLKFICDTFYEGQQELDDVLIIPVSLSYD 761 (1108)
T ss_pred hhHHHHHHHHHhhcccCCCCCEEEEEEEehh
Confidence 9999999977 899999999643
No 31
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.13 E-value=1.4e-10 Score=107.22 Aligned_cols=120 Identities=11% Similarity=0.100 Sum_probs=78.3
Q ss_pred eecCccc-hhhHHHHHHhCCCCcCCHHH-------------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCch
Q psy6555 20 VLDSNII-FSGLRILGEGLRVIPGTVKQ-------------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFA 85 (178)
Q Consensus 20 la~~~l~-~P~l~~~l~~~G~i~~~r~~-------------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~ 85 (178)
+++..-+ +|+++++++..|+++++|+. +.+.+++|.++.|||||+|+. +|. + .++|.|..
T Consensus 323 iaag~nL~~p~~g~llr~~GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSr---tGk--l-l~pK~G~l 396 (799)
T TIGR03703 323 IAAGINLNFWPAGPIFRRGGAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRSR---TGR--L-LPPKTGML 396 (799)
T ss_pred EEechhhccHHHHHHHHHCCceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcCC---CCC--c-cchHHHHH
Confidence 3334446 99999999999999987632 124579999999999999973 353 3 38899999
Q ss_pred hhhHhc-------CCCEEeeeecCcccchhcccchH------HHHHHHHHHcC-CCccceecCCCceeEEEEcccccCC
Q psy6555 86 KVAIEA-------KVPIIPIFTRNIRESFRTVGWLK------SFWNKLYIYTR-LPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 86 ~lA~~~-------g~pIVPv~~~G~~~~~~~~~~~~------~~~~~l~~~~~-~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
++|+++ +++||||++ |-+.++..-+..+ +..+.+...++ ... + +..+++++.+|+||+..
T Consensus 397 ~~a~~a~~~~~~~~v~IVPVsI-~Yekv~E~~~y~~El~G~~K~kEsl~~~l~~~~~--l--~~~G~i~V~FGePIsl~ 470 (799)
T TIGR03703 397 AMTLQAMLRGIRRPITLVPVYI-GYEHVMEVATYLKELRGKRKEKESVFGVLKTLRK--L--RNFGQGYVNFGEPINLN 470 (799)
T ss_pred HHHHHHhhccCCCCcEEEEEEE-ecccccchhHHHHHhcCCCccccCHHHHHHHHhc--c--CCCceEEEEeCCCccHH
Confidence 999887 899999998 3434332211000 00000000000 000 0 13589999999999865
No 32
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=99.11 E-value=1.2e-10 Score=101.85 Aligned_cols=132 Identities=17% Similarity=0.184 Sum_probs=90.5
Q ss_pred CcceeeeecCccchhhHHHHHHhCCCCcCCHH------HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhh
Q psy6555 14 TLTGSTVLDSNIIFSGLRILGEGLRVIPGTVK------QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKV 87 (178)
Q Consensus 14 ~~~~~~la~~~l~~P~l~~~l~~~G~i~~~r~------~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~l 87 (178)
++++.+++ ++++.+++++..++.++++|+ .+++.|++|. |+|||||||+. ++ .+ .++++|++.+
T Consensus 310 ~R~v~~va---y~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~-lvIFPEGTrsr---eg--~L-lrFk~l~ael 379 (498)
T PLN02499 310 GRSIPAVT---YSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGD-LVVCPEGTTCR---EP--FL-LRFSALFAEL 379 (498)
T ss_pred CCceeehH---hhHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCC-EEEcCCCCCCC---CC--cc-cccchhhhhh
Confidence 34555555 227888888988998888665 3567799999 99999999952 34 23 3899999999
Q ss_pred hHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCce-eEEEEcccccCC----CCCCHHHHHHHH
Q psy6555 88 AIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVK-LVTYVGEPIPYD----PNLTPEELAKKV 162 (178)
Q Consensus 88 A~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-i~i~vG~PI~~~----~~~s~e~v~~~~ 162 (178)
| +|||||++.....++ +.+..+. ++++. ++..|. .|.+ .++.+.++++.+ +..|..|+..++
T Consensus 380 a----~pVVPVAI~~~~~~f-~gtta~g-~k~~D-----p~~f~m--nP~p~y~v~fL~~~~~~~t~~~g~s~~evan~v 446 (498)
T PLN02499 380 T----DRIVPVAMNYRVGFF-HATTARG-WKGLD-----PIFFFM--NPRPVYEVTFLNQLPVEATCSSGKSPHDVANYV 446 (498)
T ss_pred c----CceEeEEEEeccceE-EEEcCCC-Cchhh-----hhhhee--cCCceEEEEEcCCCChhhccCCCCChHHHHHHH
Confidence 9 899999997655554 3332110 11221 111111 2444 589999999876 567889999998
Q ss_pred HHHHHH
Q psy6555 163 MRPKNN 168 (178)
Q Consensus 163 ~~~~~~ 168 (178)
++.+.+
T Consensus 447 Q~~la~ 452 (498)
T PLN02499 447 QRILAA 452 (498)
T ss_pred HHHHHH
Confidence 888765
No 33
>PRK14014 putative acyltransferase; Provisional
Probab=99.07 E-value=6.9e-10 Score=92.62 Aligned_cols=89 Identities=11% Similarity=-0.049 Sum_probs=67.9
Q ss_pred eeeeecCccc-hhhHHHHHHhCCCCcCCHHHH-----------------HH----HhcCCCeEEEEcCCccccccc----
Q psy6555 17 GSTVLDSNII-FSGLRILGEGLRVIPGTVKQC-----------------SD----ILQDNNIMAISPGGLYEAQLG---- 70 (178)
Q Consensus 17 ~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~-----------------~~----~L~~G~~v~IfPeG~r~~~~~---- 70 (178)
+++++|++++ +|++|+.+..+|.+.++|.+. .+ ..++|.+++|||||||.....
T Consensus 115 ~kfv~K~eL~~iP~~G~~~~~~~~ifi~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~ 194 (301)
T PRK14014 115 LKFFLKQELIWVPFLGLAWWALDFPFMKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQ 194 (301)
T ss_pred eEEEehHHhhhcccHHHHHHHcCCeEEeccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCccccccc
Confidence 6899999999 999999999999998876421 11 124578999999999964321
Q ss_pred CCceEEeeecccCchhhhHhcC----CCEEeeeecCccc
Q psy6555 71 DSYYKLMWRRRMGFAKVAIEAK----VPIIPIFTRNIRE 105 (178)
Q Consensus 71 ~g~~~l~~~~r~Gf~~lA~~~g----~pIVPv~~~G~~~ 105 (178)
...++-.+++|.|.+++|+++. .+|+||.+...+.
T Consensus 195 ~~~~~~lL~pk~ggf~~a~~~~~~~~~~I~dvti~y~~~ 233 (301)
T PRK14014 195 QSPYQHLLKPKAGGIAFALNAMGEQFDGLLDVTIVYPDG 233 (301)
T ss_pred CCCcccccCCCCccHHHHHHhhhccCCEEEEEEEEeCCC
Confidence 1223234588999999999986 7899999987653
No 34
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.05 E-value=2.1e-10 Score=101.47 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=88.1
Q ss_pred cceeeeecCccchhhHHHHHHhCCCCcCCHHH------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhh
Q psy6555 15 LTGSTVLDSNIIFSGLRILGEGLRVIPGTVKQ------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVA 88 (178)
Q Consensus 15 ~~~~~la~~~l~~P~l~~~l~~~G~i~~~r~~------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA 88 (178)
.++.+++ .++..+++++..+++++++|++ +.+.|++|. ++|||||||+. ++ .+ .+|+.||+.++
T Consensus 324 ~~~~~v~---~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~-lvIFPEGTrs~---~~--~l-~~Fk~~fa~l~ 393 (497)
T PLN02177 324 RKISCVT---YSISKFSELISPIKAVALSREREKDAANIKRLLEEGD-LVICPEGTTCR---EP--FL-LRFSALFAELT 393 (497)
T ss_pred CCeEEEe---ehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCC-EEECcCcCCCC---CC--Cc-chHHHHHHHHC
Confidence 3444554 1245568889999999987643 235678885 88999999852 23 23 27888887777
Q ss_pred HhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCc-eeEEEEcccccCC----CCCCHHHHHHHHH
Q psy6555 89 IEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPV-KLVTYVGEPIPYD----PNLTPEELAKKVM 163 (178)
Q Consensus 89 ~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~i~i~vG~PI~~~----~~~s~e~v~~~~~ 163 (178)
.|||||++.|...++...+... ++++ .. +..|. .|. -+++.+.+||..+ ++.+..|+.++++
T Consensus 394 ----~pIVPVAI~~~~~~f~~~t~~~--~~~~----d~-~~~~~--~p~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq 460 (497)
T PLN02177 394 ----DRIVPVAINTKQSMFHGTTVRG--YKLL----DP-YFVFM--NPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQ 460 (497)
T ss_pred ----CcEEEEEEEccccccccccccc--ceec----ch-hhhhc--CCCceEEEEECCCCChhhcccCCCCHHHHHHHHH
Confidence 5999999999887776543111 1111 11 11111 244 4799999999986 4678889999999
Q ss_pred HHHHHH
Q psy6555 164 RPKNNY 169 (178)
Q Consensus 164 ~~~~~l 169 (178)
+.+++-
T Consensus 461 ~~i~~~ 466 (497)
T PLN02177 461 RVLAGT 466 (497)
T ss_pred HHHHHh
Confidence 888754
No 35
>KOG2847|consensus
Probab=98.98 E-value=9.4e-10 Score=88.19 Aligned_cols=109 Identities=20% Similarity=0.320 Sum_probs=83.6
Q ss_pred eeecCccc-hhhHHHHHHhCCCCcCCHHH---------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhh
Q psy6555 19 TVLDSNII-FSGLRILGEGLRVIPGTVKQ---------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVA 88 (178)
Q Consensus 19 ~la~~~l~-~P~l~~~l~~~G~i~~~r~~---------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA 88 (178)
-.|++..| +|+...+++..-|+|+.|.. +-+.|..|..|-|||||.+....+ . ..++|-|..||-
T Consensus 105 laAhdICF~n~~~S~fFslGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q~~~----~-~~rfKWGigRlI 179 (286)
T KOG2847|consen 105 LAAHDICFTNPFHSNFFSLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQMEK----E-MLRFKWGIGRLI 179 (286)
T ss_pred hhhhhchhccHHHHHHHhcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCceeecccc----c-hhheeccceeee
Confidence 46788889 99999999988899988753 446789999999999999864221 1 237889999999
Q ss_pred HhcCC-C-EEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCC
Q psy6555 89 IEAKV-P-IIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 89 ~~~g~-p-IVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
+++.. | |+|+...|-+++++.. .+.++- +.+.+++.||+||...
T Consensus 180 ~ea~~~PIVlPi~h~Gmedi~P~~---------------~p~vp~---~Gk~vtV~IG~P~~~~ 225 (286)
T KOG2847|consen 180 LEAPKPPIVLPIWHTGMEDIMPEA---------------PPYVPR---FGKTVTVTIGDPINFD 225 (286)
T ss_pred ecCCCCCEEeehhhhhHHHhCccC---------------CCccCC---CCCEEEEEeCCCcchh
Confidence 98865 4 5899999988887642 112211 4579999999999975
No 36
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=98.87 E-value=2.2e-08 Score=85.84 Aligned_cols=78 Identities=19% Similarity=0.131 Sum_probs=60.9
Q ss_pred CcceeeeecCccc-hhhHHHHHHhCCCCcCCHH------HHH---HHhcC---CCeEEEEcCCcccccccCCceEEeeec
Q psy6555 14 TLTGSTVLDSNII-FSGLRILGEGLRVIPGTVK------QCS---DILQD---NNIMAISPGGLYEAQLGDSYYKLMWRR 80 (178)
Q Consensus 14 ~~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~------~~~---~~L~~---G~~v~IfPeG~r~~~~~~g~~~l~~~~ 80 (178)
...+++++|++++ +|++||.+..+|.++++|+ .++ +.+++ ...++|||||||.. .+ .
T Consensus 119 ~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t---~~-------~ 188 (374)
T PLN02510 119 LGYIKYVLKSSLMKLPVFGWAFHIFEFIPVERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYT---EA-------K 188 (374)
T ss_pred CcccEEEEeHHHhhchHHHHHHHHcCCeeeeCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCC---cc-------c
Confidence 3467899999999 9999999999999999864 222 23443 36799999999942 22 2
Q ss_pred ccCchhhhHhcCCCEEeeeec
Q psy6555 81 RMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 81 r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
+.|+.++|.++|+||+.-.+.
T Consensus 189 ~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 189 CQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred cchHHHHHHHcCCCcceeEEc
Confidence 477889999999999977774
No 37
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=98.79 E-value=1.1e-08 Score=89.91 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=82.9
Q ss_pred cc-hhhHHHHHHhCCCCcCCHHH------HHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEe
Q psy6555 25 II-FSGLRILGEGLRVIPGTVKQ------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIP 97 (178)
Q Consensus 25 l~-~P~l~~~l~~~G~i~~~r~~------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVP 97 (178)
.| +|.++|++..+|.++++|++ +.+.|++|+ ++|||||||+. ++ .+ .+|+.|++.+| ++|||
T Consensus 357 tFsip~lg~lL~~i~ti~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGTRsr---~g--~L-lrFk~l~A~la----~~IVP 425 (525)
T PLN02588 357 TYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGD-LVVCPEGTTCR---EP--YL-LRFSPLFSEVC----DVIVP 425 (525)
T ss_pred EEEhHHHHHHHHhcCceeecCCCcchHHHHHHHHhCCC-EEEccCccccC---CC--cc-cChhhhHHHhc----Cceee
Confidence 57 89999999999999987654 456678888 77999999842 23 23 38899999888 78999
Q ss_pred eeecCcccchhcc-cchHHHHHHHHHHcCCCccceecCCC-ceeEEEEcccccC--C---C----CCCHHHHHHHHHHHH
Q psy6555 98 IFTRNIRESFRTV-GWLKSFWNKLYIYTRLPLVPIYGGFP-VKLVTYVGEPIPY--D---P----NLTPEELAKKVMRPK 166 (178)
Q Consensus 98 v~~~G~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~-~~i~i~vG~PI~~--~---~----~~s~e~v~~~~~~~~ 166 (178)
|++.-...+ ++. +...| +++.. +..|. .| ...++.+-++++. + + ..|.+|+.+++++.+
T Consensus 426 VAI~~~~~~-f~gtt~~g~--k~~D~-----~~fl~--nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~i 495 (525)
T PLN02588 426 VAIDSHVTF-FYGTTASGL--KAFDP-----IFFLL--NPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEI 495 (525)
T ss_pred EEEEEeccc-cceeecCCC--cccce-----eEEEe--cCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHH
Confidence 999865444 332 11111 11110 11111 23 4568999999986 1 2 356778888888777
Q ss_pred HH
Q psy6555 167 NN 168 (178)
Q Consensus 167 ~~ 168 (178)
.+
T Consensus 496 A~ 497 (525)
T PLN02588 496 GN 497 (525)
T ss_pred HH
Confidence 55
No 38
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.68 E-value=3.2e-07 Score=71.86 Aligned_cols=131 Identities=23% Similarity=0.218 Sum_probs=89.1
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcC----CHH------HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPG----TVK------QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~----~r~------~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
..++.|+. -.. --+...++...|+..+ +++ ++...|++|.++.|-|+|-++. .. +...|
T Consensus 68 ~~~~amvS-~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~itpDgPkGp------~~---~~~~G 137 (214)
T COG2121 68 KKIYAMVS-PSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAITPDGPKGP------VH---KIGDG 137 (214)
T ss_pred CcEEEEEc-CCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEEcCCCCCCC------ce---eccch
Confidence 33444433 334 6677778888887543 222 2345679999999999999742 11 44699
Q ss_pred chhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHH
Q psy6555 84 FAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVM 163 (178)
Q Consensus 84 f~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~ 163 (178)
.+-||.++|+||+||.+.-.. .+..-+| .+ +-+|.| .+++++++|+||.++.+.++|++.++.+
T Consensus 138 ii~LA~~sg~pi~pv~~~~sr-~~~lKsW--------Dk-~~IP~P------Fgk~~i~~gePi~~~~D~~~~~l~~~~~ 201 (214)
T COG2121 138 IIALAQKSGVPIIPVGVATSR-CWRLKTW--------DK-TIIPLP------FGKIKIVLGEPIEVDADKDKEELEEKRQ 201 (214)
T ss_pred hhHhhHhcCCCeEEEEEeeee-eeeeccc--------cc-ccccCc------cceeEEEecCceeecccccHHHHHHHHH
Confidence 999999999999999997433 3221122 11 123332 3799999999999998888888888777
Q ss_pred HHHHHHHh
Q psy6555 164 RPKNNYYS 171 (178)
Q Consensus 164 ~~~~~l~~ 171 (178)
+...++.+
T Consensus 202 ~~~~~~n~ 209 (214)
T COG2121 202 EVSLALNQ 209 (214)
T ss_pred HHHHHhhh
Confidence 76666544
No 39
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=98.40 E-value=1.6e-06 Score=78.32 Aligned_cols=138 Identities=12% Similarity=0.029 Sum_probs=84.4
Q ss_pred eeeeecCccchhhHHHHHHhCCCCcCCH---------H----HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccC
Q psy6555 17 GSTVLDSNIIFSGLRILGEGLRVIPGTV---------K----QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMG 83 (178)
Q Consensus 17 ~~~la~~~l~~P~l~~~l~~~G~i~~~r---------~----~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~G 83 (178)
.++++-+.+++|.++.+++.+|++-.-| . -+...|++|.++.+||||+|+. +|+ +. + ++
T Consensus 144 ~~~~ag~nl~~~~lg~~lr~~GafFirRsf~~~~LY~~vl~eYi~~ll~~G~~le~F~EG~RSR---tGk--ll-~--Pk 215 (621)
T PRK11915 144 ALTFGGANLNFFPMGAWAKRTGAIFIRRQTKDIPVYRFVLRAYAAQLVQNHVNLTWSIEGGRTR---TGK--LR-P--PV 215 (621)
T ss_pred ceeehhhhhcchhHHHHHHhCCcEEeccCCCCchHHHHHHHHHHHHHHhCCCcEEEEeCCCCCC---CCC--CC-C--Cc
Confidence 3455555666888999999999764322 1 2346689999999999999974 463 32 4 44
Q ss_pred chhhh---------HhcCCCEEeeeecCcccchhccc-------------chHHHHHHHHHHcCCCccceecCCCceeEE
Q psy6555 84 FAKVA---------IEAKVPIIPIFTRNIRESFRTVG-------------WLKSFWNKLYIYTRLPLVPIYGGFPVKLVT 141 (178)
Q Consensus 84 f~~lA---------~~~g~pIVPv~~~G~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i 141 (178)
+..|+ ...+++||||++.- +.++..-+ ...++.+.+ +.++- .-+++++
T Consensus 216 ~GlLs~vv~~~~~~~~~dV~iVPVsI~Y-DrV~E~~~y~~El~G~~K~~Esl~~l~~~~-~~l~~--------~~G~i~V 285 (621)
T PRK11915 216 FGILRYITDAVDEIDGPEVYLVPTSIVY-DQLHEVEAMTTEAYGAVKRPEDLRFLVRLA-RQQGE--------RLGRAYL 285 (621)
T ss_pred hhhHHHHHHHHhcCCCCCeEEEEEEEee-cccccHHHHHHHhcCCCCCccHHHHHHHHH-HHHhh--------cCceEEE
Confidence 44455 45679999999953 33332211 001111111 10000 2379999
Q ss_pred EEcccccCCC-------CCC--HHHHHHHHHHHHHHHHhh
Q psy6555 142 YVGEPIPYDP-------NLT--PEELAKKVMRPKNNYYSL 172 (178)
Q Consensus 142 ~vG~PI~~~~-------~~s--~e~v~~~~~~~~~~l~~l 172 (178)
.||+||+..+ +++ ...+++...+++.++++.
T Consensus 286 ~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~ 325 (621)
T PRK11915 286 DFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRA 325 (621)
T ss_pred ECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhc
Confidence 9999999862 122 345666777777777654
No 40
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=98.32 E-value=3e-07 Score=71.63 Aligned_cols=75 Identities=15% Similarity=-0.106 Sum_probs=55.1
Q ss_pred cceeeeecCccc-hhhHHHHHHhCCCCcCCHHH------HH---HHhcC---CCeEEEEcCCcccccccCCceEEeeecc
Q psy6555 15 LTGSTVLDSNII-FSGLRILGEGLRVIPGTVKQ------CS---DILQD---NNIMAISPGGLYEAQLGDSYYKLMWRRR 81 (178)
Q Consensus 15 ~~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~------~~---~~L~~---G~~v~IfPeG~r~~~~~~g~~~l~~~~r 81 (178)
..+++++|++++ .|++++++...|.++++|+. .. +.+++ |..++|||||||... +..
T Consensus 52 ~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~---~~~------- 121 (193)
T cd07990 52 GRLKIVLKDSLKYPPLGGWGWQLGEFIFLKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTE---EKK------- 121 (193)
T ss_pred ceEEeeehhhhhcCChhhHHHhhCeeEEEECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCH---HHH-------
Confidence 357899999999 99999999999999987753 11 22333 899999999998531 211
Q ss_pred cCchhhhHhcCCCEEeee
Q psy6555 82 MGFAKVAIEAKVPIIPIF 99 (178)
Q Consensus 82 ~Gf~~lA~~~g~pIVPv~ 99 (178)
.-+.++|.+.|+|++.-.
T Consensus 122 ~~~~~~a~k~~~p~l~~v 139 (193)
T cd07990 122 ERSQEFAEKNGLPPLKHV 139 (193)
T ss_pred HHHHHHHHHcCCCCccee
Confidence 122378888888888544
No 41
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=97.99 E-value=5.1e-05 Score=63.01 Aligned_cols=121 Identities=11% Similarity=-0.047 Sum_probs=73.8
Q ss_pred ceeeeecCccchhhHHHHHH----hCCCCcC-CH---HHHHHHhcCCCeEEEEcCCccc----ccccC-CceEEeeeccc
Q psy6555 16 TGSTVLDSNIIFSGLRILGE----GLRVIPG-TV---KQCSDILQDNNIMAISPGGLYE----AQLGD-SYYKLMWRRRM 82 (178)
Q Consensus 16 ~~~~la~~~l~~P~l~~~l~----~~G~i~~-~r---~~~~~~L~~G~~v~IfPeG~r~----~~~~~-g~~~l~~~~r~ 82 (178)
++.++++..- +|.+..++. ..|.-.+ +. ..+.++|++|+.|+++|....+ ..-.. |.. .....
T Consensus 138 ~~~~v~~~~~-n~~~~~~~~~~R~~~g~~~i~~~~~~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~---a~~~~ 213 (298)
T PRK08419 138 AVSIVGRLLK-SAPINEMISKRREQFGIELIDKKGAMKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKR---VTHTT 213 (298)
T ss_pred CeEEEEeCCC-ChHHHHHHHHHHHHcCCeeEECccHHHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCC---cccch
Confidence 4455555322 566655554 2343222 22 3455778999999999965422 11111 332 25678
Q ss_pred CchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCC-CCCHHHHHHH
Q psy6555 83 GFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDP-NLTPEELAKK 161 (178)
Q Consensus 83 Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~-~~s~e~v~~~ 161 (178)
|.++||.++|+||||+++..++ ....++.+++||+.++ +.+.+++.+.
T Consensus 214 g~a~LA~k~~apvvpv~~~~~~-------------------------------~~~~~i~~~~~i~~~~~~~~~~~~~~~ 262 (298)
T PRK08419 214 IASILARRYNALIIPVFIFNDD-------------------------------YSHFTITFFPPIRSKITDDAEADILEA 262 (298)
T ss_pred hHHHHHHHHCCCEEEEEEEECC-------------------------------CCeEEEEEcCCccCCCCCChHHHHHHH
Confidence 9999999999999999995421 1357788899998753 2224555555
Q ss_pred HHHHHHHHHh
Q psy6555 162 VMRPKNNYYS 171 (178)
Q Consensus 162 ~~~~~~~l~~ 171 (178)
++++.+.+.+
T Consensus 263 ~~~~~~~lE~ 272 (298)
T PRK08419 263 TQAQASACEE 272 (298)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 42
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=97.98 E-value=4.9e-06 Score=71.50 Aligned_cols=52 Identities=10% Similarity=-0.131 Sum_probs=42.6
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHHHH---------HHHhcC---CCeEEEEcCCcccc
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVKQC---------SDILQD---NNIMAISPGGLYEA 67 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~~~---------~~~L~~---G~~v~IfPeG~r~~ 67 (178)
.+++++|+++. +|++||.+...|.+.+||+.. .+.+++ +..++|||||||..
T Consensus 113 ~~~~vlKkeL~~iPv~Gw~~~~~~~IfIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~ 177 (376)
T PLN02380 113 SALAVMKKSSKFLPVIGWSMWFSEYVFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFT 177 (376)
T ss_pred ceeEeeHHHhhhccHHHHHHHHcCCEEecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCC
Confidence 46789999999 999999999999999987532 234554 78899999999963
No 43
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.72 E-value=0.00017 Score=60.07 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=40.1
Q ss_pred HHHHhcCCCeEEEEcCCcccc---cccC-CceEEeeecccCchhhhHhcCCCEEeeeecC
Q psy6555 47 CSDILQDNNIMAISPGGLYEA---QLGD-SYYKLMWRRRMGFAKVAIEAKVPIIPIFTRN 102 (178)
Q Consensus 47 ~~~~L~~G~~v~IfPeG~r~~---~~~~-g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G 102 (178)
+.++|++|+.|++.|+...+. .-.- |.. .....|.++||.++|+||||+++.-
T Consensus 175 ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~---a~t~~g~a~LA~~~~apVvp~~~~r 231 (298)
T PRK07920 175 LAERLRAGGVVCLLADRDLTRSGVEVDFFGER---TRMPAGPAALALETGAALLPVHLWF 231 (298)
T ss_pred HHHHHHcCCeEEEEeccCccCCCCEEeeCCCC---CCCCCCHHHHHHHHCCcEEEEEEEE
Confidence 457789999999999987531 1111 332 2567899999999999999999964
No 44
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=97.12 E-value=0.0034 Score=51.88 Aligned_cols=91 Identities=13% Similarity=0.192 Sum_probs=58.8
Q ss_pred HHHHHhcCCCeEEEEcCCccccc---ccC--CceEEeeecccCchhhhHhcCCCEEeeeecCcccchhcccchHHHHHHH
Q psy6555 46 QCSDILQDNNIMAISPGGLYEAQ---LGD--SYYKLMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRTVGWLKSFWNKL 120 (178)
Q Consensus 46 ~~~~~L~~G~~v~IfPeG~r~~~---~~~--g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~~~~~~~~l 120 (178)
.+.++|++|+.|++.+....+.. ..+ |.. .....|.++||.++|+||||+++.=+++
T Consensus 183 ~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~---a~~~~g~a~lA~~~~apvvp~~~~r~~~--------------- 244 (295)
T PF03279_consen 183 ELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRP---ASTPTGPARLARKTGAPVVPVFAYREPD--------------- 244 (295)
T ss_pred HHHHHhccCCEEEEEECCCCCCCCceEEeECCee---cccccHHHHHHHHhCCcEEEEEEEEeCC---------------
Confidence 45577899999999998643221 112 432 2556899999999999999999963321
Q ss_pred HHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHHHHHHHH
Q psy6555 121 YIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNY 169 (178)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l 169 (178)
....++.+-+|++.+...+.+++.+...+.+|+.
T Consensus 245 ---------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~ 278 (295)
T PF03279_consen 245 ---------------GSHYRIEIEPPLDFPSSEDIEELTQRYNDRLEEW 278 (295)
T ss_pred ---------------CCEEEEEEeecccCCccchHHHHHHHHHHHHHHH
Confidence 1256777777887764334444444444444443
No 45
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.81 E-value=0.01 Score=49.63 Aligned_cols=72 Identities=10% Similarity=0.046 Sum_probs=47.7
Q ss_pred hhhHHHHHHh----CC--CCcCCHHH---HHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcC
Q psy6555 27 FSGLRILGEG----LR--VIPGTVKQ---CSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAK 92 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~~~r~~---~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g 92 (178)
+|.+..++.. .| .++.+++. +.++|++|+.|++.+.=.. +..-.. |... ..-.|.++||.++|
T Consensus 157 n~~~d~~~~~~R~~~g~~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a---~t~~g~a~LA~~~~ 233 (310)
T PRK05646 157 NPVFDFIQRRGRERHNLDSTAIEREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPA---ATVTATTKFARLGR 233 (310)
T ss_pred CHHHHHHHHHHhhccCCCcccccHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcc---hhhhHHHHHHHhhC
Confidence 6777766642 33 35445544 4467799999999966321 122122 4332 44588999999999
Q ss_pred CCEEeeeec
Q psy6555 93 VPIIPIFTR 101 (178)
Q Consensus 93 ~pIVPv~~~ 101 (178)
+||||+++.
T Consensus 234 apvvp~~~~ 242 (310)
T PRK05646 234 ARVIPFTQK 242 (310)
T ss_pred CcEEEEEEE
Confidence 999999996
No 46
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.76 E-value=0.0089 Score=49.98 Aligned_cols=72 Identities=8% Similarity=-0.023 Sum_probs=46.4
Q ss_pred hhhHHHHHHh----CC--CCcCCHH---HHHHHhcCCCeEEEEcCCccc--ccccC-CceEEeeecccCchhhhHhcCCC
Q psy6555 27 FSGLRILGEG----LR--VIPGTVK---QCSDILQDNNIMAISPGGLYE--AQLGD-SYYKLMWRRRMGFAKVAIEAKVP 94 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~~~r~---~~~~~L~~G~~v~IfPeG~r~--~~~~~-g~~~l~~~~r~Gf~~lA~~~g~p 94 (178)
+|.+..++.. .| .++.+.+ .+.++|++|+.|++.+.=..+ ..-+- |... ..-+|.++||.++|+|
T Consensus 168 n~~~d~~i~~~R~~~g~~~i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~gv~v~FFG~~a---~t~~~~a~LA~~~~ap 244 (308)
T PRK06553 168 NPYAARKVLEARRTTMGGLVPSGAGAAFALAGVLERGGHVGMLVDQKFTRGVEVTFFGRPV---KTNPLLAKLARQYDCP 244 (308)
T ss_pred ChHHHHHHHHHHHHcCCCcccCCChHHHHHHHHHHcCCeEEEEecccCCCCceeccCCCcC---CCCchHHHHHHHHCCC
Confidence 5666666542 23 2332333 345678999999999664322 11122 5432 4467889999999999
Q ss_pred EEeeeec
Q psy6555 95 IIPIFTR 101 (178)
Q Consensus 95 IVPv~~~ 101 (178)
|||+++.
T Consensus 245 Vvp~~~~ 251 (308)
T PRK06553 245 VHGARCI 251 (308)
T ss_pred EEEEEEE
Confidence 9999995
No 47
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.71 E-value=0.012 Score=48.74 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=46.4
Q ss_pred hhhHHHHHHh----CCCCcCCH----HHHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCC
Q psy6555 27 FSGLRILGEG----LRVIPGTV----KQCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKV 93 (178)
Q Consensus 27 ~P~l~~~l~~----~G~i~~~r----~~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~ 93 (178)
+|.+.+++.. .|.--++. ..+.++|++|+.|++.+.=.. +..-.- |... ..-+|.++||.++|+
T Consensus 145 n~~~d~~~~~~R~~~g~~~i~~~~~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a---~t~~~~a~LA~~~~a 221 (293)
T PRK06946 145 NPLLDAIAKAARGRFGAEMVSRADSARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPA---CTLTAVSRLARTGGA 221 (293)
T ss_pred CHHHHHHHHHHHHhcCCCccCCCchHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCc---HHhHHHHHHHHhcCC
Confidence 6777666542 33222222 245567899999999976432 122122 4332 345789999999999
Q ss_pred CEEeeeec
Q psy6555 94 PIIPIFTR 101 (178)
Q Consensus 94 pIVPv~~~ 101 (178)
||||+++.
T Consensus 222 ~vvp~~~~ 229 (293)
T PRK06946 222 QVVPFITE 229 (293)
T ss_pred eEEEEEEE
Confidence 99999885
No 48
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=96.63 E-value=0.015 Score=48.77 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=37.2
Q ss_pred HHHHHhcCCCeEEEEcCCccc----ccccC-CceEEeeecccCchhhhHhcCCCEEeeeec
Q psy6555 46 QCSDILQDNNIMAISPGGLYE----AQLGD-SYYKLMWRRRMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 46 ~~~~~L~~G~~v~IfPeG~r~----~~~~~-g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
.+.++|++|+.|++.+.-..+ ..-.. |... ..-+|.++||.++|+||||+++.
T Consensus 193 ~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a---~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 193 PFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYK---ATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCch---hHhHHHHHHHHHhCCeEEEEEEE
Confidence 345678999999999764422 11122 4322 33468899999999999999984
No 49
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.54 E-value=0.022 Score=47.16 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=46.8
Q ss_pred hhhHHHHHHh----CC--CCcCCH---HHHHHHhcCCCeEEEEcCCccc--ccccC-CceEEeeecccCchhhhHhcCCC
Q psy6555 27 FSGLRILGEG----LR--VIPGTV---KQCSDILQDNNIMAISPGGLYE--AQLGD-SYYKLMWRRRMGFAKVAIEAKVP 94 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~~~r---~~~~~~L~~G~~v~IfPeG~r~--~~~~~-g~~~l~~~~r~Gf~~lA~~~g~p 94 (178)
+|.+..++.. .| .++.+. ..+.++|++|+.|++.|.=..+ ..-+. |... ..-+|.++||.++|+|
T Consensus 149 n~~~d~~~~~~R~~~g~~~i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FFG~~a---~t~~~~a~LA~~~~ap 225 (290)
T PRK06628 149 NPYVNKLVNESRAGDKLRLIPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFLGHPA---MTASAIAKIALQYKYP 225 (290)
T ss_pred CHHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecCCCcc---ccchHHHHHHHHHCCC
Confidence 6777666532 33 343222 3455678999999999653321 11122 5432 4457899999999999
Q ss_pred EEeeeec
Q psy6555 95 IIPIFTR 101 (178)
Q Consensus 95 IVPv~~~ 101 (178)
|||+++.
T Consensus 226 vv~~~~~ 232 (290)
T PRK06628 226 IIPCQII 232 (290)
T ss_pred EEEEEEE
Confidence 9999985
No 50
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.54 E-value=0.017 Score=48.25 Aligned_cols=112 Identities=13% Similarity=-0.019 Sum_probs=66.6
Q ss_pred hhhHHHHHHh----CCCCcCCHH---HHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCCC
Q psy6555 27 FSGLRILGEG----LRVIPGTVK---QCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKVP 94 (178)
Q Consensus 27 ~P~l~~~l~~----~G~i~~~r~---~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~p 94 (178)
+|.+..++.. .|..-++.+ .+.++|++|+.|++.+.-.. +..-+. |..+ ...-.|.++||.++|+|
T Consensus 160 n~~~d~~~~~~R~~~g~~~i~~~~~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~--a~t~~g~a~LA~~~~ap 237 (309)
T PRK06860 160 NPLYDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQ--AATTTGTWMLARMSKAA 237 (309)
T ss_pred CHHHHHHHHHHHhhcCCcCcCcccHHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCc--hhhHHHHHHHHHHhCCe
Confidence 6676665532 332222333 34567899999999976432 122122 4320 13457889999999999
Q ss_pred EEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHH
Q psy6555 95 IIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYY 170 (178)
Q Consensus 95 IVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~ 170 (178)
|||+++.=..+ .....+.+.+|++...+.+.+++.+...+.+|++-
T Consensus 238 vvp~~~~R~~~------------------------------~~~~~i~~~~~~~~~~~~d~~~~t~~~n~~lE~~I 283 (309)
T PRK06860 238 VIPFVPRRKPD------------------------------GKGYELIILPPEDSPPLDDAEATAAWMNKVVEKCI 283 (309)
T ss_pred EEEEEEEEeCC------------------------------CCeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999952110 12467777777775434455555555556665553
No 51
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=96.52 E-value=0.02 Score=47.63 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=37.3
Q ss_pred HHHHhcCCCeEEEEcCCcc----cccccC-Cce-EEeeecccCchhhhHhcCCCEEeeeec
Q psy6555 47 CSDILQDNNIMAISPGGLY----EAQLGD-SYY-KLMWRRRMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 47 ~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~-~l~~~~r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
+.++|++|+.|+|.+.-.. +..-.. |.. . ..-.|.++||.++|+||+|+++.
T Consensus 181 i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a---~~~~g~a~LA~~~~apvip~~~~ 238 (303)
T TIGR02207 181 MIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDA---ATTTGTSILARLSKCAVVPFTPR 238 (303)
T ss_pred HHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcc---hhHHHHHHHHHHhCCeEEEEEEE
Confidence 5567899999999976332 111122 432 2 34579999999999999999996
No 52
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.42 E-value=0.021 Score=47.68 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=45.4
Q ss_pred hhhHHHHHHh----CC--CCc-CCHHHHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCCC
Q psy6555 27 FSGLRILGEG----LR--VIP-GTVKQCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKVP 94 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~-~~r~~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~p 94 (178)
+|.+..++.. .| ++. ..-..+.++|++|+.|++.+.=.. +..-.- |... ..-+|.++||.++|+|
T Consensus 160 n~~~d~~i~~~R~~~g~~~i~~~~~r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a---~t~~g~a~LA~~~~ap 236 (306)
T PRK08733 160 NPVFEWAVKRGRLRYATHMFANEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPA---STITATHQLARLTGCA 236 (306)
T ss_pred CHHHHHHHHHHHhhcCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCch---hHHHHHHHHHHHhCCe
Confidence 5666665543 23 231 122345577899999999966331 111122 4332 4457899999999999
Q ss_pred EEeeeec
Q psy6555 95 IIPIFTR 101 (178)
Q Consensus 95 IVPv~~~ 101 (178)
|||+++.
T Consensus 237 vvp~~~~ 243 (306)
T PRK08733 237 VVPYFHR 243 (306)
T ss_pred EEEEEEE
Confidence 9999984
No 53
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.25 E-value=0.029 Score=49.61 Aligned_cols=71 Identities=13% Similarity=0.029 Sum_probs=46.4
Q ss_pred hhhHHHHHHh----CCC--CcCCHH---HHHHHhcCCCeEEEEcCCccc---ccccC-CceEEeeecccCchhhhHhcCC
Q psy6555 27 FSGLRILGEG----LRV--IPGTVK---QCSDILQDNNIMAISPGGLYE---AQLGD-SYYKLMWRRRMGFAKVAIEAKV 93 (178)
Q Consensus 27 ~P~l~~~l~~----~G~--i~~~r~---~~~~~L~~G~~v~IfPeG~r~---~~~~~-g~~~l~~~~r~Gf~~lA~~~g~ 93 (178)
+|.+.+++.. .|. ++ +++ .+.++|++|+.|++.|.-..+ ..-.- |... ..-+|.++||.++|+
T Consensus 174 Np~ld~li~~~R~r~G~~lI~-~~~giR~liraLk~G~~vgiL~DQ~~~~~Gv~VpFFG~~a---~T~tgpA~LA~rtgA 249 (454)
T PRK05906 174 NRRLNKKIFSLRESFKGKIVP-PKNGINQALRALHQGEVVGIVGDQALLSSSYSYPLFGSQA---FTTTSPALLAYKTGK 249 (454)
T ss_pred CHHHHHHHHHHHHhcCCeeec-CchHHHHHHHHHhcCCEEEEEeCCCCCCCceEeCCCCCcc---chhhHHHHHHHHhCC
Confidence 6777666542 332 32 233 344678999999999775422 22122 4332 345789999999999
Q ss_pred CEEeeeec
Q psy6555 94 PIIPIFTR 101 (178)
Q Consensus 94 pIVPv~~~ 101 (178)
||||+++.
T Consensus 250 pVVpv~~~ 257 (454)
T PRK05906 250 PVIAVAIY 257 (454)
T ss_pred eEEEEEEE
Confidence 99999985
No 54
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=96.24 E-value=0.036 Score=46.21 Aligned_cols=52 Identities=13% Similarity=0.103 Sum_probs=36.0
Q ss_pred HHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCCCEEeeeec
Q psy6555 47 CSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 47 ~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
+.++|++|+.|++.+.=.. +..-.. |... ..-+|.++||.++|+||||+++.
T Consensus 185 i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a---~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 185 LLASLKRGESGYYLPDEDHGPEQSVFVPFFATYK---ATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred HHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcc---hhHHHHHHHHHhcCCeEEEEEEE
Confidence 4567899999999965432 111122 4322 33467899999999999999985
No 55
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.12 E-value=0.059 Score=45.32 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=70.7
Q ss_pred hhhHHHHHHh----CC--CCcCCHH---HHHHHhcCCCeEEEEcCCccccccc----C-CceEEeeecccCchhhhHhcC
Q psy6555 27 FSGLRILGEG----LR--VIPGTVK---QCSDILQDNNIMAISPGGLYEAQLG----D-SYYKLMWRRRMGFAKVAIEAK 92 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~~~r~---~~~~~L~~G~~v~IfPeG~r~~~~~----~-g~~~l~~~~r~Gf~~lA~~~g 92 (178)
+|.+.+++.. .| .++.+.+ .+.++|++|+.|++-|+=..+...+ - |... .--+|..+||.++|
T Consensus 158 np~ld~~i~~~R~r~~~~~~~~~~~~ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a---~T~t~~~~LA~~~~ 234 (308)
T COG1560 158 NPLLDWLITRGRERFGGRLLPRKGEGIRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPA---ATTTGPAKLARLTG 234 (308)
T ss_pred CHHHHHHHHHHHHhcCCcccCCCchhHHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcc---cccchHHHHHHHhC
Confidence 7888777754 22 3454323 4557789999999999854433221 2 4433 22489999999999
Q ss_pred CCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceecCCCceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHH
Q psy6555 93 VPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYGGFPVKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYY 170 (178)
Q Consensus 93 ~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~ 170 (178)
++|+|+++.=.. --+..++.+-+|.+-..+.|.++..+...+.+|+.-
T Consensus 235 a~vip~~~~r~~------------------------------~g~~y~l~i~p~~~~~~~~D~~~~a~~mn~~~E~~I 282 (308)
T COG1560 235 AAVVPVFPVRNP------------------------------DGSGYTLHIHPPMTDDPSEDVEADAQRMNDFVEKWI 282 (308)
T ss_pred CCEEEEEEEEeC------------------------------CCCeEEEEEeccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999996311 113566666555553345556666666666666553
No 56
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.11 E-value=0.051 Score=44.88 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=34.6
Q ss_pred HHHHh-cCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCCCEEeeeec
Q psy6555 47 CSDIL-QDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 47 ~~~~L-~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
+.++| ++|..|++.+.=.. +..-.- |... ..-+|.++||.++|+||||+++.
T Consensus 169 i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a---~t~~g~a~LA~~~~apvvp~~~~ 226 (289)
T PRK08706 169 LVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQT---ATITGLSRIAALANAKVIPAIPV 226 (289)
T ss_pred HHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccc---hhhhHHHHHHHhcCCeEEEEEEE
Confidence 45677 57777777754221 111122 4332 45688999999999999999996
No 57
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.93 E-value=0.067 Score=44.64 Aligned_cols=72 Identities=10% Similarity=-0.034 Sum_probs=47.2
Q ss_pred hhhHHHHHHh----CCC--CcCCH---HHHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcC
Q psy6555 27 FSGLRILGEG----LRV--IPGTV---KQCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAK 92 (178)
Q Consensus 27 ~P~l~~~l~~----~G~--i~~~r---~~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g 92 (178)
+|.+..++.. .|. ++.+. ..+.++|++|+.|++.+.=.. +..-.- |... ..-+|.++||.++|
T Consensus 147 n~~~d~~~~~~R~~~g~~~i~~~~~~~r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a---~t~~g~a~LA~~~~ 223 (305)
T PRK08734 147 SEAVDGFLQLVRGGDNVRQVRAEGPAVRQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPA---LTMTLVNRLAERTG 223 (305)
T ss_pred CHHHHHHHHHHhccCCCeeecCCchhHHHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCcc---chhhHHHHHHHHhC
Confidence 6777776653 332 32232 345677899999999966332 121122 4332 45689999999999
Q ss_pred CCEEeeeec
Q psy6555 93 VPIIPIFTR 101 (178)
Q Consensus 93 ~pIVPv~~~ 101 (178)
+||||+++.
T Consensus 224 apVvp~~~~ 232 (305)
T PRK08734 224 ATVLYGWCE 232 (305)
T ss_pred CeEEEEEEE
Confidence 999999985
No 58
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=95.77 E-value=0.071 Score=44.12 Aligned_cols=72 Identities=19% Similarity=0.101 Sum_probs=46.3
Q ss_pred hhhHHHHHHh----CC--CCcCCH---HHHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcC
Q psy6555 27 FSGLRILGEG----LR--VIPGTV---KQCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAK 92 (178)
Q Consensus 27 ~P~l~~~l~~----~G--~i~~~r---~~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g 92 (178)
+|.+..++.. .| .++.++ ..+.++|++|+.|++.+.-.. +..-.. |... ..-.|.++||.++|
T Consensus 135 n~~~~~~~~~~R~~~g~~~i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a---~~~~gpa~lA~~~~ 211 (289)
T PRK08905 135 KAALRPLMEAGRARGNMRTAPATPQGVRMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPA---YTMTLVARLAEVTG 211 (289)
T ss_pred CHHHHHHHHHHhcccCCceeccCCccHHHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcc---hHHHHHHHHHHhhC
Confidence 6667665542 33 243222 345678899999999955332 111122 4332 55688999999999
Q ss_pred CCEEeeeec
Q psy6555 93 VPIIPIFTR 101 (178)
Q Consensus 93 ~pIVPv~~~ 101 (178)
+||||+++.
T Consensus 212 apvvp~~~~ 220 (289)
T PRK08905 212 VPVIFVAGE 220 (289)
T ss_pred CcEEEEEEE
Confidence 999999985
No 59
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=95.70 E-value=0.075 Score=44.28 Aligned_cols=73 Identities=5% Similarity=-0.091 Sum_probs=45.6
Q ss_pred hhhHHHHHHh----CCCCcCCHH---HHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcCCC
Q psy6555 27 FSGLRILGEG----LRVIPGTVK---QCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAKVP 94 (178)
Q Consensus 27 ~P~l~~~l~~----~G~i~~~r~---~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~p 94 (178)
+|++..++.. .|.--++++ .+.++|++|+.|++.+.=.. +..-.- |..+ ...-.|.++||.++|+|
T Consensus 158 n~~~d~~~~~~R~~~g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~--a~t~~g~~~LA~~~~ap 235 (305)
T PRK08025 158 NKLMEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVEN--VATTNGTYVLSRLSGAA 235 (305)
T ss_pred CHHHHHHHHHHHhccCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcc--hhHHHHHHHHHHhhCCe
Confidence 6777766532 232222333 35567899999999965331 122122 4221 12357889999999999
Q ss_pred EEeeeec
Q psy6555 95 IIPIFTR 101 (178)
Q Consensus 95 IVPv~~~ 101 (178)
|||+++.
T Consensus 236 vvp~~~~ 242 (305)
T PRK08025 236 MLTVTMV 242 (305)
T ss_pred EEEEEEE
Confidence 9999984
No 60
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=95.14 E-value=0.042 Score=50.55 Aligned_cols=80 Identities=8% Similarity=0.069 Sum_probs=57.5
Q ss_pred ecCccc-hhhHHHHHHhCCCCcCCHH-------------HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchh
Q psy6555 21 LDSNII-FSGLRILGEGLRVIPGTVK-------------QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAK 86 (178)
Q Consensus 21 a~~~l~-~P~l~~~l~~~G~i~~~r~-------------~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~ 86 (178)
+...-. ++.+|.+++..|++-+-|. =..+...+|.++-=|-||+|++ +|+ + ++-|.|...
T Consensus 328 aAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~rgysleyfIEGGRSR---TGr--l-L~PKtGmls 401 (810)
T COG2937 328 AAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFSRGYSLEYFIEGGRSR---TGR--L-LPPKTGMLS 401 (810)
T ss_pred hccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHhCCcceEEEeecCccc---cCC--c-CCCccchHH
Confidence 333444 8899999999999876443 2345679999999999999974 464 2 477999887
Q ss_pred hhHhc---C----CCEEeeeecCcccch
Q psy6555 87 VAIEA---K----VPIIPIFTRNIRESF 107 (178)
Q Consensus 87 lA~~~---g----~pIVPv~~~G~~~~~ 107 (178)
+-+++ | +-+||||| |-+.++
T Consensus 402 mtlqA~Lrg~~rpI~lvPvyI-gYe~v~ 428 (810)
T COG2937 402 MTLQAMLRGRTRPILLVPVYI-GYEHVH 428 (810)
T ss_pred HHHHHHhcCCCCCeEEEeeEe-ehhhHh
Confidence 76654 3 45699999 444443
No 61
>KOG1505|consensus
Probab=94.85 E-value=0.0059 Score=52.09 Aligned_cols=50 Identities=14% Similarity=-0.071 Sum_probs=39.6
Q ss_pred ceeeeecCccc-hhhHHHHHHhCCCCcCCHH------HHHH---Hh---cCCCeEEEEcCCcc
Q psy6555 16 TGSTVLDSNII-FSGLRILGEGLRVIPGTVK------QCSD---IL---QDNNIMAISPGGLY 65 (178)
Q Consensus 16 ~~~~la~~~l~-~P~l~~~l~~~G~i~~~r~------~~~~---~L---~~G~~v~IfPeG~r 65 (178)
..++++|..+- +|++||.+...|.|.++|+ ...+ .+ ++-..+++||||||
T Consensus 100 ~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 100 NVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDSPDPYWLLLFPEGTR 162 (346)
T ss_pred hhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccCCCceEEEEecCCCc
Confidence 66788999999 9999999999999988764 2222 22 55578999999995
No 62
>COG3176 Putative hemolysin [General function prediction only]
Probab=94.56 E-value=0.033 Score=46.39 Aligned_cols=63 Identities=5% Similarity=0.013 Sum_probs=47.7
Q ss_pred HHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEeeeecCcccchhcc
Q psy6555 46 QCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRTV 110 (178)
Q Consensus 46 ~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~ 110 (178)
.+.+.+++|.+|.+||.|..+.....+...+ .....+.+++.+++++++|+++.|.++..+++
T Consensus 148 cv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~--~gcaS~~~~~~~~~a~~~p~~~~~r~~~~f~~ 210 (292)
T COG3176 148 CVHREYREGRTLLLFWAGLVAYLDKGRLDDM--PGCASVPGLPRKHGAALAPVHHNGRNSALFYL 210 (292)
T ss_pred HHHHHHhcCCEEEEeccchhHHhhccCcccC--ccccccccchhhcccccchhheecccCCchhh
Confidence 4556789999999999999886432222222 33566778899999999999999988776654
No 63
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.54 E-value=0.29 Score=40.50 Aligned_cols=72 Identities=8% Similarity=-0.081 Sum_probs=44.0
Q ss_pred hhhHHHHHHh----CCC--CcCCH---HHHHHHhcCCCeEEEEcCCcc----cccccC-CceEEeeecccCchhhhHhcC
Q psy6555 27 FSGLRILGEG----LRV--IPGTV---KQCSDILQDNNIMAISPGGLY----EAQLGD-SYYKLMWRRRMGFAKVAIEAK 92 (178)
Q Consensus 27 ~P~l~~~l~~----~G~--i~~~r---~~~~~~L~~G~~v~IfPeG~r----~~~~~~-g~~~l~~~~r~Gf~~lA~~~g 92 (178)
+|.+..++.. .|. ++.+. ..+.++|++|+.|+|-+.=.. +..-.- |... ..-+|.+.+|.+++
T Consensus 146 n~~~d~~~~~~R~~~g~~~i~~~~~~~r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a---~t~~~~~~la~~~~ 222 (295)
T PRK05645 146 LKAVDELLRKQRVQLGNRVAPSTKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQA---LTSKFVPNMLAGGK 222 (295)
T ss_pred CHHHHHHHHHHhCCCCCeEeecCcccHHHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCch---hhhhHHHHHHHhhC
Confidence 6666665543 232 33222 235677899999999955332 111122 4322 33356778999999
Q ss_pred CCEEeeeec
Q psy6555 93 VPIIPIFTR 101 (178)
Q Consensus 93 ~pIVPv~~~ 101 (178)
+||||+++.
T Consensus 223 ~pvv~~~~~ 231 (295)
T PRK05645 223 AVGVFLHAL 231 (295)
T ss_pred CeEEEEEEE
Confidence 999999985
No 64
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=94.32 E-value=0.25 Score=45.52 Aligned_cols=53 Identities=9% Similarity=0.139 Sum_probs=38.2
Q ss_pred HHHHHhcCCCeEEEEcCCcc---cccccC-CceEEeeecccCchhhhHhcCCCEEeeeec
Q psy6555 46 QCSDILQDNNIMAISPGGLY---EAQLGD-SYYKLMWRRRMGFAKVAIEAKVPIIPIFTR 101 (178)
Q Consensus 46 ~~~~~L~~G~~v~IfPeG~r---~~~~~~-g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~ 101 (178)
.+.++|++|+.|+|-+.-.. +..-.. |.. ..+-.|.++||.++++||||+++.
T Consensus 537 ~i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~---a~~~~g~~~lA~~~~~pvv~~~~~ 593 (656)
T PRK15174 537 ACMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQ---ITYSTFCSRLAWKMHLPTVFSVPI 593 (656)
T ss_pred HHHHHHHcCCeEEEEeCCCCCCCCceeccCCCc---cCcCcHHHHHHHHHCCCEEEeEEE
Confidence 45677899999999944332 222122 432 256789999999999999999994
No 65
>KOG3730|consensus
Probab=94.01 E-value=0.48 Score=42.11 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=79.4
Q ss_pred CCcceeeeecCccc--hhhHHHHHHhCCCCcCCHH-------------HHHHHhcCCC-eEEEEcCCcccccccCCceEE
Q psy6555 13 PTLTGSTVLDSNII--FSGLRILGEGLRVIPGTVK-------------QCSDILQDNN-IMAISPGGLYEAQLGDSYYKL 76 (178)
Q Consensus 13 ~~~~~~~la~~~l~--~P~l~~~l~~~G~i~~~r~-------------~~~~~L~~G~-~v~IfPeG~r~~~~~~g~~~l 76 (178)
.++++-.+|+..=| +-+++.+++..|++-..|. -+...++++. .|=.|-||||++. ++ .+
T Consensus 174 YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~---~K-~L 249 (685)
T KOG3730|consen 174 YDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSFGNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRN---FK-AL 249 (685)
T ss_pred ccCCCchhhcccchHhhhHHHHHHHhcccceeeeccCCceehHHHHHHHHHHHHhcCCCceEEEEeeccccc---cc-cc
Confidence 34445456666666 8899999999998765443 2334456655 4889999999753 22 22
Q ss_pred eeecccCchhhhHhc-------CCCEEeeeecCcccchhcccchHHHHHHH--HHHcCCCccceec-C----------CC
Q psy6555 77 MWRRRMGFAKVAIEA-------KVPIIPIFTRNIRESFRTVGWLKSFWNKL--YIYTRLPLVPIYG-G----------FP 136 (178)
Q Consensus 77 ~~~~r~Gf~~lA~~~-------g~pIVPv~~~G~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~-~----------~~ 136 (178)
.-+-|...++++- ++=||||.+.- +++ +.+.| ++.+|+|-+-=.. | ..
T Consensus 250 --~PK~GlL~mvlePyf~geV~Dv~iVPVSv~Y-dkI---------LEE~LyvYELLGvPKPKEST~gllKArkil~e~f 317 (685)
T KOG3730|consen 250 --VPKIGLLSMVLEPYFTGEVPDVMIVPVSVAY-DKI---------LEEQLYVYELLGVPKPKESTKGLLKARKILDERF 317 (685)
T ss_pred --CcchhhHHHHHhhhhcCCcCceEEEEeeecH-HHH---------HHHHHHHHHHhCCCCcccchhHHHHHHHHHHhhc
Confidence 4478888888763 46789999852 222 12223 5777777543111 1 35
Q ss_pred ceeEEEEcccccCC
Q psy6555 137 VKLVTYVGEPIPYD 150 (178)
Q Consensus 137 ~~i~i~vG~PI~~~ 150 (178)
+.+.+.+|+||++.
T Consensus 318 Gs~fl~FGePISvr 331 (685)
T KOG3730|consen 318 GSMFLDFGEPISVR 331 (685)
T ss_pred CcEEEecCCCccHH
Confidence 78999999999975
No 66
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=93.07 E-value=0.23 Score=43.10 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=52.9
Q ss_pred HHHhcC-CCeEEEEcCCccccccc-CCceEEeeecccC----chhhhHhcCC--CEEeeeecCcccchhcccchHHHHHH
Q psy6555 48 SDILQD-NNIMAISPGGLYEAQLG-DSYYKLMWRRRMG----FAKVAIEAKV--PIIPIFTRNIRESFRTVGWLKSFWNK 119 (178)
Q Consensus 48 ~~~L~~-G~~v~IfPeG~r~~~~~-~g~~~l~~~~r~G----f~~lA~~~g~--pIVPv~~~G~~~~~~~~~~~~~~~~~ 119 (178)
...|++ |..+.|||+|+|.+... +|+.... +|-.- |-+|+.++|+ ++.|+++. +.++++.-. ...+.
T Consensus 287 ~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~pa-pFD~~svd~mR~l~~~s~~ptHfYPlAl~-~yDImPPP~---~VEke 361 (426)
T PLN02349 287 ALLLREGGQLIWIAPSGGRDRPDPLTGEWTPA-PFDPSAVDNMRRLTEKSKAPGHFYPLAML-SYDIMPPPP---QVEKE 361 (426)
T ss_pred HHHHhcCCeEEEEeCCCCCCCCCccCCCccCC-CCChHHHHHHHHHHHhcCCCccccchHHH-hCccCCCcc---ccccc
Confidence 345777 78899999999998665 3532211 23222 4567777776 68899886 555554321 11111
Q ss_pred HHHHcCCCccceecCCCceeEEEEcccccCC
Q psy6555 120 LYIYTRLPLVPIYGGFPVKLVTYVGEPIPYD 150 (178)
Q Consensus 120 l~~~~~~~~~~~~~~~~~~i~i~vG~PI~~~ 150 (178)
+.+. + ++ ..+.+-+.||+-|+..
T Consensus 362 IGE~-R--~v-----~F~gvGlsvg~EI~~~ 384 (426)
T PLN02349 362 IGER-R--LV-----GFTGVGLSVGEEIDFS 384 (426)
T ss_pred cCce-e--ee-----eeecceeeeccccchH
Confidence 1000 0 11 2357888999999974
No 67
>KOG3729|consensus
Probab=92.59 E-value=0.25 Score=44.36 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=54.7
Q ss_pred eeecCccc-hhhHHHHHHhCCCCcCCHH---------H----------HHHHhcCCCeEEEEcCCcccccccCCceEEee
Q psy6555 19 TVLDSNII-FSGLRILGEGLRVIPGTVK---------Q----------CSDILQDNNIMAISPGGLYEAQLGDSYYKLMW 78 (178)
Q Consensus 19 ~la~~~l~-~P~l~~~l~~~G~i~~~r~---------~----------~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~ 78 (178)
.+|...-. +|.++|+++.+|++-+.|+ . ..++|++|..+=+|-||+|++. |+.-
T Consensus 188 ~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi~~~L~Q~~~iEfFlEGtRsR~---GK~~--- 261 (715)
T KOG3729|consen 188 HIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYIEQVLSQDMPIEFFLEGTRSRF---GKAL--- 261 (715)
T ss_pred eeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHHHHHHhCCCceEEEEecccccc---CCcC---
Confidence 46666667 9999999999998654332 1 3457899999999999999854 4321
Q ss_pred ecccCc---hhhhHhcC----CCEEeeeec
Q psy6555 79 RRRMGF---AKVAIEAK----VPIIPIFTR 101 (178)
Q Consensus 79 ~~r~Gf---~~lA~~~g----~pIVPv~~~ 101 (178)
--|.|. +.=|.++| +=+|||.+.
T Consensus 262 ~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 262 TPKNGLLSVVVEAVQHGFIPDCLLVPVSYT 291 (715)
T ss_pred CcccccHHHHHHHHhcCCCCceEEEeeecc
Confidence 235664 44566776 468999875
No 68
>KOG2898|consensus
Probab=72.54 E-value=37 Score=29.23 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=58.3
Q ss_pred CeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEeeeecCcccchhcccc--hHHHHHHHHHHcCCCcccee
Q psy6555 55 NIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRTVGW--LKSFWNKLYIYTRLPLVPIY 132 (178)
Q Consensus 55 ~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~ 132 (178)
..+++||||+.-. .....++++ +-..+.|..|-|+++.-..+..+.+.. ...+.+.+...+.-
T Consensus 212 ~~ii~fpegtCin----n~~~~~fk~-----k~~~e~~~~i~pvaik~~~~~~~~f~~s~~~s~~~~l~~~~ts------ 276 (354)
T KOG2898|consen 212 EPILLFPEGTCIN----NTKVMQFKL-----KGSFEEGVKIYPVAIKYDPRFGDAFWNSPELSFTRYLLELMTS------ 276 (354)
T ss_pred CcEEEeecceeeC----CceeEEEec-----CCChhhcceeeeeeeecCccccccccCCccccHHHHHHHHHhh------
Confidence 5899999999742 222333333 334566789999999876554443321 11111111111000
Q ss_pred cCCCceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHHhhhcCC
Q psy6555 133 GGFPVKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYYSLSDIP 176 (178)
Q Consensus 133 ~~~~~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~~l~d~~ 176 (178)
+.--..+.--+|+...++.|.-+....+.+++..-..|-|..
T Consensus 277 --~~~v~~i~~l~~~~r~~~et~t~~a~~v~~~ig~~~gl~~~~ 318 (354)
T KOG2898|consen 277 --WAIVCDIWYLPPMRRDNDETATQFANRVKSLIGKSAGLKDLE 318 (354)
T ss_pred --hheeeeeeecccEEeecccchhHHHHHHHHHHHHhhCCcccC
Confidence 111123344566666566777778888888888777766543
No 69
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=64.32 E-value=14 Score=30.04 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=47.3
Q ss_pred CCcCCHHHHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEeeeecCcccchhcc
Q psy6555 39 VIPGTVKQCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRTV 110 (178)
Q Consensus 39 ~i~~~r~~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~~ 110 (178)
+.|.+++.+.++|++|. |+||=+||-..+.++ -+..+..|.+.+++++=.+..+-+.+|+.-
T Consensus 110 ~e~~~~~~A~~~l~~gr-VvIf~gGtg~P~fTT---------Dt~AALrA~ei~ad~ll~atn~VDGVY~~D 171 (238)
T COG0528 110 AEPYSRREAIRHLEKGR-VVIFGGGTGNPGFTT---------DTAAALRAEEIEADVLLKATNKVDGVYDAD 171 (238)
T ss_pred cCccCHHHHHHHHHcCC-EEEEeCCCCCCCCch---------HHHHHHHHHHhCCcEEEEeccCCCceeCCC
Confidence 45667888999999988 789999885432222 256789999999999999887677777654
No 70
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=61.54 E-value=17 Score=27.09 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=29.5
Q ss_pred ceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHHhhhcCC
Q psy6555 137 VKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYYSLSDIP 176 (178)
Q Consensus 137 ~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~~l~d~~ 176 (178)
..-.++||-|...++.... ..+.++++.++|.+.+++|
T Consensus 53 ~~~~vVVGlP~~m~g~~~~--~~~~~~~f~~~L~~r~~lp 90 (141)
T COG0816 53 QVDTVVVGLPLNMDGTEGP--RAELARKFAERLKKRFNLP 90 (141)
T ss_pred CCCEEEEecCcCCCCCcch--hHHHHHHHHHHHHHhcCCC
Confidence 5678999999998743333 5567888888898888877
No 71
>COG3411 Ferredoxin [Energy production and conversion]
Probab=52.40 E-value=9.7 Score=24.49 Aligned_cols=25 Identities=28% Similarity=0.531 Sum_probs=21.5
Q ss_pred CcCCHHHHHHHhcCCCeEEEEcCCc
Q psy6555 40 IPGTVKQCSDILQDNNIMAISPGGL 64 (178)
Q Consensus 40 i~~~r~~~~~~L~~G~~v~IfPeG~ 64 (178)
|.+.+..|..+-+.|-.|+++|||+
T Consensus 3 i~~t~tgCl~~C~~gPvl~vYpegv 27 (64)
T COG3411 3 IRVTRTGCLGVCQDGPVLVVYPEGV 27 (64)
T ss_pred eEEeecchhhhhccCCEEEEecCCe
Confidence 4566778888899999999999996
No 72
>COG4365 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.94 E-value=22 Score=31.46 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=36.9
Q ss_pred HHHHHhCCCCcCCHHHHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCc--hhhhH----hcCCCEEeeeec
Q psy6555 31 RILGEGLRVIPGTVKQCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGF--AKVAI----EAKVPIIPIFTR 101 (178)
Q Consensus 31 ~~~l~~~G~i~~~r~~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf--~~lA~----~~g~pIVPv~~~ 101 (178)
+.+.+..|. ....+..-+.|+++++.++.=|-..+- -+|. ++ .++|++ +-||. +.++|||||+=.
T Consensus 59 reYh~dlg~-s~~~e~~iekLkdp~S~vVvgGQQAGL--ltGP--lY-TihKi~siilLAreqede~~vpVVpVfWv 129 (537)
T COG4365 59 REYHRDLGT-SAGVEALIEKLKDPESRVVVGGQQAGL--LTGP--LY-TIHKIASIILLAREQEDELDVPVVPVFWV 129 (537)
T ss_pred HHHHHHhcc-cHHHHHHHHHhcCCCceEEeccccccc--ccCc--hH-HHHHHHHHHHhhHhhhhhhCCCeeEEEEe
Confidence 344444444 333344456689998876654433332 1331 22 556664 66776 458999999854
No 73
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=46.15 E-value=45 Score=21.91 Aligned_cols=53 Identities=11% Similarity=-0.001 Sum_probs=34.8
Q ss_pred CcceeeeecCccchhhHHHHHHhCCCCcC--C--HH------HHHHHhcCCCeEEEEcCCccc
Q psy6555 14 TLTGSTVLDSNIIFSGLRILGEGLRVIPG--T--VK------QCSDILQDNNIMAISPGGLYE 66 (178)
Q Consensus 14 ~~~~~~la~~~l~~P~l~~~l~~~G~i~~--~--r~------~~~~~L~~G~~v~IfPeG~r~ 66 (178)
...+..|+...-=--++..++...|...+ | +. ++.+.|++|.+++|-|+|-++
T Consensus 9 ~~~~~~lvS~s~DGe~ia~~~~~~G~~~iRGSs~rgg~~Alr~~~~~lk~G~~~~itpDGPrG 71 (74)
T PF04028_consen 9 RRKIAALVSRSRDGELIARVLERFGFRTIRGSSSRGGARALREMLRALKEGYSIAITPDGPRG 71 (74)
T ss_pred CCCEEEEEccCcCHHHHHHHHHHcCCCeEEeCCCCcHHHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 34454444332226677888888887554 2 22 244667999999999999874
No 74
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=44.77 E-value=53 Score=23.88 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=25.5
Q ss_pred ceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHHhhhcCC
Q psy6555 137 VKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYYSLSDIP 176 (178)
Q Consensus 137 ~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~~l~d~~ 176 (178)
..-.++||=|+...+..+ +..+.++++.++|.+-+++|
T Consensus 48 ~~~~iVvGlP~~~dG~~~--~~a~~v~~f~~~L~~~~~~~ 85 (130)
T TIGR00250 48 TPDKIVVGLPLNMDGTEG--PLTERAQKFANRLEGRFGVP 85 (130)
T ss_pred CCCEEEEeccCCCCcCcC--HHHHHHHHHHHHHHHHhCCC
Confidence 346799999999865444 33456667777776655554
No 75
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=41.50 E-value=26 Score=25.66 Aligned_cols=38 Identities=24% Similarity=0.204 Sum_probs=23.6
Q ss_pred ceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHHhhh-cCC
Q psy6555 137 VKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYYSLS-DIP 176 (178)
Q Consensus 137 ~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~~l~-d~~ 176 (178)
..-.++||-|+...+..+ +..+.++++.++|.+.+ ++|
T Consensus 51 ~i~~iVvGlP~~~~G~~~--~~~~~v~~f~~~L~~~~~~ip 89 (135)
T PF03652_consen 51 QIDGIVVGLPLNMDGSES--EQARRVRKFAEELKKRFPGIP 89 (135)
T ss_dssp CECEEEEEEEBBCTSSC---CCHHHHHHHHHHHHHHH-TSE
T ss_pred CCCEEEEeCCcccCCCcc--HHHHHHHHHHHHHHHhcCCCc
Confidence 456899999999864333 22344566666666655 554
No 76
>PF13865 FoP_duplication: C-terminal duplication domain of Friend of PRMT1
Probab=38.34 E-value=45 Score=21.84 Aligned_cols=23 Identities=26% Similarity=0.125 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhh
Q psy6555 151 PNLTPEELAKKVMRPKNNYYSLS 173 (178)
Q Consensus 151 ~~~s~e~v~~~~~~~~~~l~~l~ 173 (178)
...|.||+|+.++.||.....-.
T Consensus 38 ~~kT~EeLDaELD~Ym~~~~~~L 60 (74)
T PF13865_consen 38 PPKTAEELDAELDAYMSKTKSKL 60 (74)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 35689999999999997765533
No 77
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=38.22 E-value=52 Score=24.39 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=16.7
Q ss_pred hhhhHhcCCCEEeeeecCccc
Q psy6555 85 AKVAIEAKVPIIPIFTRNIRE 105 (178)
Q Consensus 85 ~~lA~~~g~pIVPv~~~G~~~ 105 (178)
...|.+.+.+|+|||++....
T Consensus 17 L~~A~~~~~~v~~vfv~d~~~ 37 (165)
T PF00875_consen 17 LHAAAQNGDPVLPVFVFDPEE 37 (165)
T ss_dssp HHHHHHTTSEEEEEEEE-HHG
T ss_pred HHHHHHcCCCeEEEEEecccc
Confidence 347789999999999998773
No 78
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=37.35 E-value=78 Score=23.21 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=24.4
Q ss_pred ceeEEEEcccccCCCCCCHHHHHHHHHHHHHHHHhhhcCC
Q psy6555 137 VKLVTYVGEPIPYDPNLTPEELAKKVMRPKNNYYSLSDIP 176 (178)
Q Consensus 137 ~~i~i~vG~PI~~~~~~s~e~v~~~~~~~~~~l~~l~d~~ 176 (178)
..-.++||=|....+..+ +..+.++++.++|.+.+++|
T Consensus 54 ~i~~iVvGlP~~~~G~~~--~~~~~v~~f~~~L~~~~~~~ 91 (138)
T PRK00109 54 QPDGLVVGLPLNMDGTEG--PRTERARKFANRLEGRFGLP 91 (138)
T ss_pred CCCEEEEeccCCCCCCcC--HHHHHHHHHHHHHHHHhCCC
Confidence 345799999999865444 33355666666666555554
No 79
>PRK05783 hypothetical protein; Provisional
Probab=35.74 E-value=41 Score=22.80 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=26.5
Q ss_pred ceeEEEEcccccCC-CCCCHHHHHHHHHHHHHHH
Q psy6555 137 VKLVTYVGEPIPYD-PNLTPEELAKKVMRPKNNY 169 (178)
Q Consensus 137 ~~i~i~vG~PI~~~-~~~s~e~v~~~~~~~~~~l 169 (178)
.--.+.+|+=|.+. +..|.++..+.+++.+++|
T Consensus 34 ~V~~VRvGK~iel~l~~~~~e~a~~~v~~mc~~L 67 (84)
T PRK05783 34 NIIEVRAGKYLVFKIEANSPEEAKELALKIAREG 67 (84)
T ss_pred CcceEEeeEEEEEEEcCCCHHHHHHHHHHHHHhc
Confidence 34478899999887 5667888889999998887
No 80
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=32.31 E-value=87 Score=19.18 Aligned_cols=27 Identities=7% Similarity=0.060 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhcCCC
Q psy6555 151 PNLTPEELAKKVMRPKNNYYSLSDIPQ 177 (178)
Q Consensus 151 ~~~s~e~v~~~~~~~~~~l~~l~d~~~ 177 (178)
+..|.|+.++..+.+-+.+.+.++.|.
T Consensus 10 ~Grs~EqK~~L~~~it~a~~~~~~~p~ 36 (60)
T PRK02289 10 EGRSQEQKNALAREVTEVVSRIAKAPK 36 (60)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcCc
Confidence 356899999999999999998888864
No 81
>PRK14556 pyrH uridylate kinase; Provisional
Probab=28.96 E-value=86 Score=25.63 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=40.6
Q ss_pred CHHHHHHHhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEeeeecCcccchhc
Q psy6555 43 TVKQCSDILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIPIFTRNIRESFRT 109 (178)
Q Consensus 43 ~r~~~~~~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVPv~~~G~~~~~~~ 109 (178)
+++.+.+.|++|. |+||.+|+-....++ -.-++.+|...+++.+=++. ..+-+|+.
T Consensus 125 ~~~~~~~~l~~g~-vvi~~gg~G~p~~St---------D~lAallA~~l~Ad~Lii~T-dVDGVYd~ 180 (249)
T PRK14556 125 SAHEFNQELAKGR-VLIFAGGTGNPFVTT---------DTTASLRAVEIGADALLKAT-TVNGVYDK 180 (249)
T ss_pred CHHHHHHHHhCCC-EEEEECCCCCCcCCc---------HHHHHHHHHHcCCCEEEEEe-CCCccCCC
Confidence 7788889999999 899999983221111 13468899999999888776 46666643
No 82
>PHA01346 hypothetical protein
Probab=27.77 E-value=1.1e+02 Score=18.09 Aligned_cols=24 Identities=13% Similarity=0.195 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhc
Q psy6555 151 PNLTPEELAKKVMRPKNNYYSLSD 174 (178)
Q Consensus 151 ~~~s~e~v~~~~~~~~~~l~~l~d 174 (178)
++-|+|.+.+..+.+...+.+.||
T Consensus 30 pdfsqekihaeldsllrklsrhfd 53 (53)
T PHA01346 30 PDFSQEKIHAELDSLLRKLSRHFD 53 (53)
T ss_pred CCccHHHHHHHHHHHHHHHHhhcC
Confidence 355789999999999999888776
No 83
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=27.18 E-value=70 Score=28.40 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=14.6
Q ss_pred hhHhcCCCEEeeeecCcc
Q psy6555 87 VAIEAKVPIIPIFTRNIR 104 (178)
Q Consensus 87 lA~~~g~pIVPv~~~G~~ 104 (178)
.|++.+.||+||+++..+
T Consensus 21 ~A~~~~~~vl~vfi~dp~ 38 (471)
T TIGR03556 21 AARQQSAKVVGLFCLDPN 38 (471)
T ss_pred HHHhcCCCEEEEEEEchh
Confidence 467788899999999743
No 84
>COG4261 Predicted acyltransferase [General function prediction only]
Probab=26.61 E-value=3.8e+02 Score=22.32 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=39.5
Q ss_pred CCEEeeeecCcccchhcccchHHHHHHHHHHcCCCccceec-CCCceeEEEE---cccccCCCCCCHHHHHHHHHHHHHH
Q psy6555 93 VPIIPIFTRNIRESFRTVGWLKSFWNKLYIYTRLPLVPIYG-GFPVKLVTYV---GEPIPYDPNLTPEELAKKVMRPKNN 168 (178)
Q Consensus 93 ~pIVPv~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~i~i~v---G~PI~~~~~~s~e~v~~~~~~~~~~ 168 (178)
.-++++...|..-.|+.-+++ +...++.|+.++.+ ...++.++.+ -+|+.++-+.-...+.+.+++|..+
T Consensus 207 ~~v~~m~FlGapA~FpqgP~i------lAaaLk~PV~l~fgLy~~~~y~l~fE~fad~l~lpR~eRa~al~a~i~rYaar 280 (309)
T COG4261 207 WRVCWMSFLGAPAPFPQGPFI------LAAALKCPVNLIFGLYQHGKYHLHFESFADPLQLPRGERAQALQAAIDRYAAR 280 (309)
T ss_pred ceEeeHhhcCCCCCCCCCHHH------HHHHhCCCeEEEEEeeeCCeeEEEEecccccccCCchhhHHHHHHHHHHHHHH
Confidence 345666666666665543322 34445666555544 2345666654 5677776333344566666666666
Q ss_pred HH
Q psy6555 169 YY 170 (178)
Q Consensus 169 l~ 170 (178)
|.
T Consensus 281 LE 282 (309)
T COG4261 281 LE 282 (309)
T ss_pred HH
Confidence 54
No 85
>TIGR00591 phr2 photolyase PhrII. All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=25.59 E-value=90 Score=27.41 Aligned_cols=13 Identities=23% Similarity=0.212 Sum_probs=10.8
Q ss_pred cCCCEEeeeecCc
Q psy6555 91 AKVPIIPIFTRNI 103 (178)
Q Consensus 91 ~g~pIVPv~~~G~ 103 (178)
.+.||+||+++..
T Consensus 51 ~~~~vl~vyi~dp 63 (454)
T TIGR00591 51 KKLPLHVCFCLVD 63 (454)
T ss_pred cCCCEEEEEEeCC
Confidence 3789999999854
No 86
>PRK00304 hypothetical protein; Provisional
Probab=24.85 E-value=80 Score=20.97 Aligned_cols=22 Identities=5% Similarity=-0.002 Sum_probs=18.1
Q ss_pred HHHHHHhcCCCeEEEEcCCccc
Q psy6555 45 KQCSDILQDNNIMAISPGGLYE 66 (178)
Q Consensus 45 ~~~~~~L~~G~~v~IfPeG~r~ 66 (178)
.++.+.|++|+.|++|=+=..+
T Consensus 39 ~qv~~qL~~G~~vIvfse~~es 60 (75)
T PRK00304 39 LRVRQALTKGQAVILFDPESQQ 60 (75)
T ss_pred HHHHHHHHcCCEEEEECCCcce
Confidence 4677889999999999886654
No 87
>PF06794 UPF0270: Uncharacterised protein family (UPF0270); InterPro: IPR010648 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 1Y0N_A.
Probab=24.84 E-value=82 Score=20.59 Aligned_cols=22 Identities=14% Similarity=0.072 Sum_probs=16.3
Q ss_pred HHHHHHHhcCCCeEEEEcCCcc
Q psy6555 44 VKQCSDILQDNNIMAISPGGLY 65 (178)
Q Consensus 44 r~~~~~~L~~G~~v~IfPeG~r 65 (178)
..++.+.|++|+.|++|=+=..
T Consensus 39 v~qv~~qL~~G~avI~~se~~e 60 (70)
T PF06794_consen 39 VEQVKQQLKSGEAVIVFSELHE 60 (70)
T ss_dssp HHHHHHHHHTTSEEEEE-TTT-
T ss_pred HHHHHHHHHcCCEEEEECCccC
Confidence 3467788999999999987554
No 88
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=23.97 E-value=1.4e+02 Score=18.05 Aligned_cols=26 Identities=19% Similarity=0.005 Sum_probs=20.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhcCCC
Q psy6555 152 NLTPEELAKKVMRPKNNYYSLSDIPQ 177 (178)
Q Consensus 152 ~~s~e~v~~~~~~~~~~l~~l~d~~~ 177 (178)
..|.|+-++..+.+.+.+.+.++.|.
T Consensus 11 grs~eqk~~l~~~it~~l~~~~~~p~ 36 (62)
T PRK00745 11 GRTVEQKRKLVEEITRVTVETLGCPP 36 (62)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCh
Confidence 35788888888888888888888764
No 89
>PRK04966 hypothetical protein; Provisional
Probab=23.74 E-value=87 Score=20.61 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=18.4
Q ss_pred HHHHHHHhcCCCeEEEEcCCccc
Q psy6555 44 VKQCSDILQDNNIMAISPGGLYE 66 (178)
Q Consensus 44 r~~~~~~L~~G~~v~IfPeG~r~ 66 (178)
..++.+.|++|..|++|=|=..+
T Consensus 39 v~qv~~qL~~G~~viv~se~~ES 61 (72)
T PRK04966 39 VADVKRQLQSGEAVLVWSELHET 61 (72)
T ss_pred HHHHHHHHHcCCEEEEECCCCCe
Confidence 34678889999999999886544
No 90
>COG1828 PurS Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component [Nucleotide transport and metabolism]
Probab=23.06 E-value=1e+02 Score=20.81 Aligned_cols=36 Identities=14% Similarity=0.072 Sum_probs=27.5
Q ss_pred CceeEEEEcccccCC-CCCCHHHHHHHHHHHHHHHHh
Q psy6555 136 PVKLVTYVGEPIPYD-PNLTPEELAKKVMRPKNNYYS 171 (178)
Q Consensus 136 ~~~i~i~vG~PI~~~-~~~s~e~v~~~~~~~~~~l~~ 171 (178)
..--.+.+|+-|..+ +..|.|...+.+++.+++|..
T Consensus 32 ~~V~~vR~gK~~el~ld~~~~e~a~~~v~~mcekLLa 68 (83)
T COG1828 32 NEVSDVRVGKVIELELDAESEEKAEEEVKEMCEKLLA 68 (83)
T ss_pred cccceeeeeeEEEEEecCcchhHHHHHHHHHHHHHhC
Confidence 345588899999987 555677888888888888754
No 91
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=20.41 E-value=1.1e+02 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.379 Sum_probs=14.0
Q ss_pred hhHhcCCCEEeeeecCcc
Q psy6555 87 VAIEAKVPIIPIFTRNIR 104 (178)
Q Consensus 87 lA~~~g~pIVPv~~~G~~ 104 (178)
.|++.+-+|+|||++..+
T Consensus 21 ~A~~~~~~vl~vfi~dp~ 38 (429)
T TIGR02765 21 KASSSSDTLIPLYCFDPR 38 (429)
T ss_pred HHHhcCCeEEEEEEECch
Confidence 466777799999999754
No 92
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=20.30 E-value=71 Score=25.79 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=25.7
Q ss_pred HhcCCCeEEEEcCCcccccccCCceEEeeecccCchhhhHhcCCCEEeee
Q psy6555 50 ILQDNNIMAISPGGLYEAQLGDSYYKLMWRRRMGFAKVAIEAKVPIIPIF 99 (178)
Q Consensus 50 ~L~~G~~v~IfPeG~r~~~~~~g~~~l~~~~r~Gf~~lA~~~g~pIVPv~ 99 (178)
+.++|-.+++|||+.-.-.. ...-....-+..+|.++++.||-=+
T Consensus 35 a~~~ga~lvvfPE~~l~g~~-----~~~~~~~~~l~~~ak~~~i~ii~G~ 79 (270)
T cd07571 35 LADEKPDLVVWPETALPFDL-----QRDPDALARLARAARAVGAPLLTGA 79 (270)
T ss_pred cccCCCCEEEecCCcCCccc-----ccCHHHHHHHHHHHHhcCCeEEEee
Confidence 34668889999998753211 1000112334567777888776433
No 93
>PRK02079 pyrroloquinoline quinone biosynthesis protein PqqD; Provisional
Probab=20.26 E-value=61 Score=22.02 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=12.3
Q ss_pred cCCCeEEEEcCCccc
Q psy6555 52 QDNNIMAISPGGLYE 66 (178)
Q Consensus 52 ~~G~~v~IfPeG~r~ 66 (178)
.+|..|+++|||...
T Consensus 19 ~~~~~vlL~PEgmi~ 33 (88)
T PRK02079 19 AQNCHVLLYPEGMIK 33 (88)
T ss_pred ccCceEEEcCCeeee
Confidence 467889999999864
No 94
>PF02700 PurS: Phosphoribosylformylglycinamidine (FGAM) synthase; InterPro: IPR003850 Phosphoribosylformylglycinamidine(FGAM) synthetase, 6.3.5.3 from EC, catalyses the fourth step in the de novo purine biosynthetic pathway []. 5-phosphoribosylformylglycinamide (FGAR) + glutamine + ATP = FGAM + glutamate + ADP + Pi In eukaryotes and many bacterial systems (including Escherichia coli and Salmonella typhimurium), the FGAM synthetase is encoded by the large form of PurL (lgPurL), which contains an N-terminal ATPase domain and a C-terminal glutamine-binding domain. In archaeal and other bacterial systems, however, FGAM synthetase is encoded by separate genes, making it a multisubunit (rather than multidomain) enzyme. The protein is composed of the small form of PurL (smPurL), which is homologus to the ATPase domain of lgPurL, PurQ which is homologous to the glutamine-binding domain of of lgPurL, and PurS, whose function is not known. This entry represents the PurS subunit of the multisubunit FGAM synthetase. Recent studies showed that disruption of the purS gene in Bacillus subtilis resulted in a purine auxotrophic phenotype, due to defective FGAM synthetase activity. Therefore, the PurS protein appears to be required for the function of the PurL and PurQ subunits of the FGAM synthetase, but the molecular mechanism for the functional role of PurS is currently not known. For additional information please see [, ].; GO: 0016879 ligase activity, forming carbon-nitrogen bonds; PDB: 2ZW2_B 3D54_B 1VQ3_B 1GTD_A 2YX5_A 2CUW_A 1TWJ_B 1T4A_B 2DGB_B.
Probab=20.19 E-value=1.2e+02 Score=20.11 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=26.6
Q ss_pred CCceeEEEEcccccCC-CCCCHHHHHHHHHHHHHHH
Q psy6555 135 FPVKLVTYVGEPIPYD-PNLTPEELAKKVMRPKNNY 169 (178)
Q Consensus 135 ~~~~i~i~vG~PI~~~-~~~s~e~v~~~~~~~~~~l 169 (178)
+..--.+.+|+-+.+. +..|.++..+.++++++++
T Consensus 30 ~~~v~~Vr~GK~~~l~~~~~~~e~a~~~v~~i~~~L 65 (80)
T PF02700_consen 30 YDGVKDVRVGKYIELELEADDEEEAEEQVEEICEKL 65 (80)
T ss_dssp -TTEEEEEEEEEEEEEEE-SSHHHHHHHHHHHHHHT
T ss_pred CcccCcEEEEEEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 3455689999999887 4557888888888888887
No 95
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=20.02 E-value=2e+02 Score=16.85 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=19.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhcCCC
Q psy6555 152 NLTPEELAKKVMRPKNNYYSLSDIPQ 177 (178)
Q Consensus 152 ~~s~e~v~~~~~~~~~~l~~l~d~~~ 177 (178)
..|.|+-++..+.+-+.+.+.++.|.
T Consensus 10 grt~eqk~~l~~~i~~~l~~~~g~~~ 35 (58)
T cd00491 10 GRTDEQKRELIERVTEAVSEILGAPE 35 (58)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcCc
Confidence 34778888888888888888777663
Done!