BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy656
(427 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 688 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 748 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 806
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 807 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 865
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 400 IGVI 403
+ I
Sbjct: 926 LDQI 929
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 688 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 748 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 806
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 807 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 865
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 400 IGVI 403
+ I
Sbjct: 926 LDQI 929
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 688 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 748 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 806
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 807 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 865
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 400 IGVI 403
+ I
Sbjct: 926 LDQI 929
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 689 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 749 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 807
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 808 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 866
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 400 IGVI 403
+ I
Sbjct: 927 LDQI 930
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 689 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 749 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 807
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 808 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 866
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 400 IGVI 403
+ I
Sbjct: 927 LDQI 930
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 689 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 749 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 807
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 808 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 866
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 400 IGVI 403
+ I
Sbjct: 927 LDQI 930
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 695 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 754
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 755 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 813
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 814 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 872
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 873 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 932
Query: 400 IGVI 403
+ I
Sbjct: 933 LDQI 936
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 689 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 749 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 807
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 808 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 866
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 400 IGVI 403
+ I
Sbjct: 927 LDQI 930
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 685 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 744
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 745 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 803
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 804 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 862
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 863 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 922
Query: 400 IGVI 403
+ I
Sbjct: 923 LDQI 926
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 693 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 753 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 811
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 812 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 870
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 400 IGVI 403
+ I
Sbjct: 931 LDQI 934
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 693 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 753 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 811
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 812 DNIMITETGNLFHIDFGHINGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 870
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 400 IGVI 403
+ I
Sbjct: 931 LDQI 934
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 689 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 749 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 807
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 808 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 866
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 867 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 400 IGVI 403
+ I
Sbjct: 927 LDQI 930
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 693 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 233 LGRQT--DIGMYE-----YFIKTYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ + T + G ++ +++K T ++FQ A FV S A Y V F+L I DRHN
Sbjct: 753 IQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 811
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 812 DNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSPHFQK 870
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R +++A +
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPELTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 400 IGVI 403
+ I
Sbjct: 931 LDQI 934
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 690 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 749
Query: 233 LGRQTDIGMYEYFIKTYGDETSKE-------FQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ +Q+ +G F KE FQ A FV S A Y V F+L I DRHN
Sbjct: 750 I-QQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 808
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 809 DNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSLHFQK 867
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R ++++A +
Sbjct: 868 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKYF 927
Query: 400 IGVI 403
+ I
Sbjct: 928 LDQI 931
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 15/244 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ++ I +++++ LDL L PY ++T G+IE V DA + +
Sbjct: 690 IFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 749
Query: 233 LGRQTDIGMYEYFIKTYGDETSKE-------FQNARRNFVRSMAAYSVIGFLLQIKDRHN 285
+ +Q+ +G F KE FQ A FV S A Y V F+L I DRHN
Sbjct: 750 I-QQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHN 808
Query: 286 GNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMG--GKIEAAPFRW 340
NIM+ + G++ HIDFG + ++S G N P + LT + + VMG GK + F+
Sbjct: 809 DNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFV-LTPDFLFVMGTSGKKTSLHFQK 867
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAFM 399
F ++CV+A+LA+R + +I L S+ML TG+P + I+ +R ++++A +
Sbjct: 868 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKYF 927
Query: 400 IGVI 403
+ I
Sbjct: 928 LDQI 931
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 15/260 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ+I I +N++Q GLDL + PY ++ G+IE V ++ + Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 233 L----GRQTDIGMYEYFIKTY-GDETSKEFQNARRN-FVRSMAAYSVIGFLLQIKDRHNG 286
+ G + + + + + D+ E +A + F RS A Y V F+L I DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFE----PDIKLTDEMVMVMGGKIEAAP---FR 339
NIM+ G + HIDFG F G++ P + D ++++ G E F
Sbjct: 948 NIMVKDDGQLFHIDFGH-FLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFE 1006
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAF 398
F E+C +A+LA+R + I+L S+ML +G+P + I +R A T++EA +
Sbjct: 1007 RFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEY 1066
Query: 399 MIGVIRNSFLNFRTRAYDYL 418
+ + ++ T D++
Sbjct: 1067 FMKQMNDAHHGGWTTKMDWI 1086
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 15/260 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ+I I +N++Q GLDL + PY ++ G+IE V ++ + Q
Sbjct: 823 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 882
Query: 233 L----GRQTDIGMYEYFIKTY-GDETSKEFQNARRN-FVRSMAAYSVIGFLLQIKDRHNG 286
+ G + + + + + D+ E +A + F RS A Y V F+L I DRHN
Sbjct: 883 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 942
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFE----PDIKLTDEMVMVMGGKIEAAP---FR 339
NIM+ G + HIDFG F G++ P + D ++++ G E F
Sbjct: 943 NIMVKDDGQLFHIDFGH-FLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFE 1001
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAF 398
F E+C +A+LA+R + I+L S+ML +G+P + I +R A T++EA +
Sbjct: 1002 RFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEY 1061
Query: 399 MIGVIRNSFLNFRTRAYDYL 418
+ + ++ T D++
Sbjct: 1062 FMKQMNDARHGGWTTKMDWI 1081
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 15/260 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ+I I +N++Q GLDL + PY ++ G+IE V ++ + Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 233 L----GRQTDIGMYEYFIKTY-GDETSKEFQNARRN-FVRSMAAYSVIGFLLQIKDRHNG 286
+ G + + + + + D+ E +A + F RS A Y V F+L I DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFE----PDIKLTDEMVMVMGGKIEAAP---FR 339
NIM+ G + HIDFG F G++ P + D ++++ G E F
Sbjct: 948 NIMVKDDGQLFHIDFGH-FLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFE 1006
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAF 398
F E+C +A+LA+R + I+L S+ML +G+P + I +R A T++EA +
Sbjct: 1007 RFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEY 1066
Query: 399 MIGVIRNSFLNFRTRAYDYL 418
+ + ++ T D++
Sbjct: 1067 FMKQMNDARHGGWTTKMDWI 1086
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 15/260 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ+I I +N++Q GLDL + PY ++ G+IE V ++ + Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 233 L----GRQTDIGMYEYFIKTY-GDETSKEFQNARRN-FVRSMAAYSVIGFLLQIKDRHNG 286
+ G + + + + + D+ E +A + F RS A Y V F+L I DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFE----PDIKLTDEMVMVMGGKIE---AAPFR 339
NIM+ G + HIDFG F G++ P + D ++++ G E F
Sbjct: 948 NIMVKDDGQLFHIDFGH-FLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQEYTKTREFE 1006
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAF 398
F E+C +A+LA+R + I+L S+ML +G+P + I +R A T++EA +
Sbjct: 1007 RFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEY 1066
Query: 399 MIGVIRNSFLNFRTRAYDYL 418
+ ++ T D++
Sbjct: 1067 FTKQMNDAHHGGWTTKMDWI 1086
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 15/242 (6%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSRDQ 232
IFK GDD+RQDML LQ+I I +N++Q GLDL + PY ++ G+IE V ++ + Q
Sbjct: 694 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 753
Query: 233 L----GRQTDIGMYEYFIKTY-GDETSKEFQNARRN-FVRSMAAYSVIGFLLQIKDRHNG 286
+ G + + + + + D+ E +A + F RS A Y V F+L I DRHN
Sbjct: 754 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 813
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFE----PDIKLTDEMVMVMGGKIEAAP---FR 339
NIM+ G + HIDFG F G++ P + D ++++ G E F
Sbjct: 814 NIMVKDDGQLFHIDFGH-FLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFE 872
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEAAAF 398
F E+C +A+LA+R + I+L S+ML +G+P + I +R A T++EA +
Sbjct: 873 RFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEY 932
Query: 399 MI 400
+
Sbjct: 933 FM 934
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 128/243 (52%), Gaps = 17/243 (6%)
Query: 172 AIFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCG---VIECVPDAK 228
IFK GDD+RQD L LQ+IS+ + ++ LDL L PY+V+ATS G I+ VP A+
Sbjct: 368 VIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAE 427
Query: 229 SRDQLGRQTDIGMYEYFIKTYGDETSKEFQNAR--RNFVRSMAAYSVIGFLLQIKDRHNG 286
D T+ + +F K E +A +V+S A Y VI ++L + DRH
Sbjct: 428 VLD-----TEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLD 482
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFEPDIKLTDEMVMVMGGKIEAAPFRWFMELCV 346
N++L K G + HIDFG++ P K EMV MGG ++ ++ F + C
Sbjct: 483 NLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNK---EMVEGMGG-TQSEQYQEFRKQCY 538
Query: 347 QAFLAMRPYQESIISLVSLMLDTGLPCFR---GQTIKLLRARFAPQATDKEAAAFMIGVI 403
AFL +R Y I++L SLM+D +P +T+K ++ +F +D+EA +M +I
Sbjct: 539 TAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLI 598
Query: 404 RNS 406
S
Sbjct: 599 DES 601
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 17/243 (6%)
Query: 172 AIFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCG---VIECVPDAK 228
IFK GDD+RQD L LQ+IS+ + ++ LDL L PY+V+ATS G I+ VP A+
Sbjct: 354 VIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAE 413
Query: 229 SRDQLGRQTDIGMYEYFIKTYGDETSKEFQNAR--RNFVRSMAAYSVIGFLLQIKDRHNG 286
D G + +F K E +A +V+S A Y VI ++L + DRH
Sbjct: 414 VLDTEG-----SIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLD 468
Query: 287 NIMLDKAGHIIHIDFGFMFESSPGGNLGFEPDIKLTDEMVMVMGGKIEAAPFRWFMELCV 346
N++L K G + HIDFG++ P K EMV MGG ++ ++ F + C
Sbjct: 469 NLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNK---EMVEGMGG-TQSEQYQEFRKQCY 524
Query: 347 QAFLAMRPYQESIISLVSLMLDTGLPCFR---GQTIKLLRARFAPQATDKEAAAFMIGVI 403
AFL +R Y I++L SLM+D +P +T+K ++ +F +D+EA +M +I
Sbjct: 525 TAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLI 584
Query: 404 RNS 406
S
Sbjct: 585 DES 587
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 171 AAIFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKSR 230
AAIFK GDD+RQD L LQ+I++ + ++ LDL L PY+V+ATS G ++ V
Sbjct: 441 AAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPYKVLATSSKHGFLQYVDSCTVA 500
Query: 231 DQLGRQTDIGMYEYFIKTYGDETSKEFQNAR--RNFVRSMAAYSVIGFLLQIKDRHNGNI 288
+ L R+ +I + +F K + + +A +++S A Y VI +LL + DRH N+
Sbjct: 501 EVLAREGNI--HNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNL 558
Query: 289 MLDKAGHIIHIDFGFMFESSPGGNLGFEPDIKLTDEMVMVMGGKIEAAPFRWFMELCVQA 348
+L G + HIDFG++ P KL+ EMV MGG I + F + C A
Sbjct: 559 LLTTNGKLFHIDFGYILGRDPKPMPPPM---KLSKEMVEAMGG-ISSEHHHEFRKQCYTA 614
Query: 349 FLAMRPYQESIISLVSLMLDTGLPCFR---GQTIKLLRARFAPQATDKEAAAFMIGVI 403
+L +R + +++L SLM+D +P + +K + TD+EA + ++
Sbjct: 615 YLHLRRHANVMLNLFSLMVDATVPDIALEPDKAVKKVEENLQLGLTDEEAVQHLQSLL 672
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 171 AAIFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECVPDAKS- 229
IFK GDD+RQDML LQ++ + ++++ GLDL + PY +AT G+IE V +++
Sbjct: 823 GVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTSETI 882
Query: 230 RDQLGRQTDIGMYEYFIKTYGDETSKEFQN------ARRNFVRSMAAYSVIGFLLQIKDR 283
D +++ F K KE+ + A F S A Y V ++L I DR
Sbjct: 883 ADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIEEFTLSCAGYCVASYVLGIGDR 942
Query: 284 HNGNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMGGKI-EAAPFR 339
H+ NIM+ K G + HIDFG + F+S G P I D + ++ GK F
Sbjct: 943 HSDNIMVKKTGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFG 1002
Query: 340 WFMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFRG-QTIKLLRARFAPQATDKEA 395
F + C A+L +R + I+L +LML GLP + I+ L+ A +++EA
Sbjct: 1003 RFRQCCEDAYLILRRHGNLFITLFALMLTAGLPELTSVKDIQYLKDSLALGKSEEEA 1059
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 14/236 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECV--PDAKSR 230
IFK GDD+RQDML LQ+I + +++Q GLDL + PY + T G+IE V D +
Sbjct: 673 IFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIAN 732
Query: 231 DQLGRQTDIGMYEYFIK------TYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRH 284
QL + +++ F K + A F S A Y V ++L I DRH
Sbjct: 733 IQLNK-SNMAATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRH 791
Query: 285 NGNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMGGKI-EAAPFRW 340
+ NIM+ ++G + HIDFG F++ G N P I D + ++ GK + F
Sbjct: 792 SDNIMIRESGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFER 851
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFR-GQTIKLLRARFAPQATDKEA 395
F C +A+ +R + + L +LM GLP + I+ L+ A T++EA
Sbjct: 852 FRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSKDIQYLKDSLALGKTEEEA 907
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 14/236 (5%)
Query: 173 IFKVGDDVRQDMLALQVISIFKNVFQQVGLDLYLFPYRVVATSPGCGVIECV--PDAKSR 230
IFK GDD+RQDML LQ+I + +++Q GLDL + PY + T G+IE V D +
Sbjct: 667 IFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIAN 726
Query: 231 DQLGRQTDIGMYEYFIK------TYGDETSKEFQNARRNFVRSMAAYSVIGFLLQIKDRH 284
QL + +++ F K + A F S A Y V ++L I DRH
Sbjct: 727 IQLNK-SNMAATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRH 785
Query: 285 NGNIMLDKAGHIIHIDFGFM---FESSPGGNLGFEPDIKLTDEMVMVMGGKI-EAAPFRW 340
+ NIM+ ++G + HIDFG F++ G N P I D + ++ GK + F
Sbjct: 786 SDNIMIRESGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFER 845
Query: 341 FMELCVQAFLAMRPYQESIISLVSLMLDTGLPCFR-GQTIKLLRARFAPQATDKEA 395
F C +A+ +R + + L +LM GLP + I+ L+ A T++EA
Sbjct: 846 FRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSKDIQYLKDSLALGKTEEEA 901
>pdb|3FPK|A Chain A, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
pdb|3FPK|B Chain B, Crystal Structure Of Ferredoxin-Nadp Reductase From
Salmonella Typhimurium
Length = 251
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 210 RVVATSPGCGVIECVPDAKSRDQLGRQTDIGMYEYFIKTYGDETSKEFQN-ARRNFVRSM 268
+VV+ + G V++ VPD ++ L T IG Y ++ YG + ++ F+N + R
Sbjct: 92 QVVSDASGFFVLDEVPDCETLWMLATGTAIGPYLSILQ-YGQDVAR-FKNLVLVHAARFA 149
Query: 269 AAYSVIGFLLQIKDRHNGNI 288
A S + +L+++ R+ G +
Sbjct: 150 ADLSYLPLMLELQQRYEGKL 169
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 281 KDRHNGNIMLDKAGHIIHIDFGF 303
+D NI+LDK GHI DFGF
Sbjct: 130 RDLKPENILLDKNGHIKITDFGF 152
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 272 SVIGFLLQI----KDRHNGNIMLDKAGHIIHIDFGFMFES 307
S +G+L + +D NI+LD GHI+ DFG E+
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189
>pdb|2QK4|A Chain A, Human Glycinamide Ribonucleotide Synthetase
pdb|2QK4|B Chain B, Human Glycinamide Ribonucleotide Synthetase
Length = 452
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 9 CPALEASNDIDMTEKDPILYDTLDSLVQ 36
CPA + SND+ + KD +L T+D + Q
Sbjct: 259 CPAPQVSNDLLLKIKDTVLQRTVDGMQQ 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,102,555
Number of Sequences: 62578
Number of extensions: 481679
Number of successful extensions: 1021
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 938
Number of HSP's gapped (non-prelim): 30
length of query: 427
length of database: 14,973,337
effective HSP length: 102
effective length of query: 325
effective length of database: 8,590,381
effective search space: 2791873825
effective search space used: 2791873825
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)