BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy6561
MSITYVLSKAAWNHQYEFNVHARSIFPCFAHGGITVLFQYPKCILPISDKIRLFGKVPAD
VSSPRSPSSQIYITEKKVIRGQHSLQFGCDLFNEHYVEYCFVYVSQDSTGAVSDVKSDCV
PTYPVSGQGPSQMASSNGLKLWIGAFWKIRTSNNKYLKSTIPAITKGASKRRSNKISVSN
FHNATSTIKEAKKILIDGTKHSNSSTATANSRSGNKFAPLTSR

High Scoring Gene Products

Symbol, full name Information P value
gogo
golden goal 		protein from Drosophila melanogaster 1.1e-32

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6561
        (223 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0052227 - symbol:gogo "golden goal" species:7227 "...   370  1.1e-32   1


>FB|FBgn0052227 [details] [associations]
            symbol:gogo "golden goal" species:7227 "Drosophila
            melanogaster" [GO:0031290 "retinal ganglion cell axon guidance"
            evidence=IMP] [GO:0030426 "growth cone" evidence=IDA] [GO:0030424
            "axon" evidence=IDA] [GO:0016021 "integral to membrane"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0004872 "receptor activity" evidence=IMP] [GO:0007411 "axon
            guidance" evidence=IMP] [GO:0072499 "photoreceptor cell axon
            guidance" evidence=IMP] GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
            GO:GO:0030424 GO:GO:0004872 GO:GO:0030426 Gene3D:2.60.120.290
            InterPro:IPR000859 SUPFAM:SSF49854 InterPro:IPR000884 Pfam:PF00090
            SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092 GO:GO:0031290
            GO:GO:0072499 eggNOG:NOG26222 GeneTree:ENSGT00520000062191
            EMBL:BT009982 RefSeq:NP_649200.2 UniGene:Dm.33859 SMR:Q9VWA7
            MINT:MINT-809113 STRING:Q9VWA7 EnsemblMetazoa:FBtr0074848
            GeneID:40225 KEGG:dme:Dmel_CG32227 UCSC:CG32227-RA CTD:40225
            FlyBase:FBgn0052227 InParanoid:Q9VWA7 OMA:CILEQGD OrthoDB:EOG41NS1X
            GenomeRNAi:40225 NextBio:817671 Uniprot:Q9VWA7
        Length = 1272

 Score = 370 (135.3 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 65/115 (56%), Positives = 90/115 (78%)

Query:    12 WNHQYEFNVHARSIFPCFAHGGITVLFQYPKCILPISDKIRLFGKVPADVSSPRSPSSQI 71
             W+ ++ FNV+ARSIFPC  H GI VL++YP CIL   D++RL+ ++ ADV+S + P+S  
Sbjct:   338 WSDEFVFNVYARSIFPCDPHTGIGVLYEYPGCILEQGDRVRLYARLRADVASLKPPTSLH 397

Query:    72 YITEKKVIRGQHSLQFGCDLFNEHYVEYCFVYVSQDSTGAVSDVKSDCVPTYPVS 126
             Y++E++V++ QHSL F C+ F+E YVEYCFVYVSQ  +GAV+DV+ DCVPT PVS
Sbjct:   398 YVSEQRVVKSQHSLYFACEHFSEKYVEYCFVYVSQAISGAVADVRMDCVPTLPVS 452


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       213   0.00084  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  188 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.07u 0.12s 18.19t   Elapsed:  00:00:01
  Total cpu time:  18.07u 0.12s 18.19t   Elapsed:  00:00:01
  Start:  Thu Aug 15 11:24:54 2013   End:  Thu Aug 15 11:24:55 2013

Back to top