Query psy6564
Match_columns 150
No_of_seqs 185 out of 1338
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:21:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1e_A Alpha-crystallin A chai 99.9 8.9E-27 3E-31 163.0 14.1 101 1-101 4-106 (106)
2 2wj5_A Heat shock protein beta 99.9 7.7E-26 2.6E-30 156.9 11.3 89 1-89 3-91 (101)
3 2klr_A Alpha-crystallin B chai 99.9 5.7E-25 2E-29 166.3 11.1 102 2-105 66-167 (175)
4 3q9p_A Heat shock protein beta 99.9 9.5E-25 3.2E-29 147.0 10.4 82 4-86 2-84 (85)
5 2y1y_A Alpha-crystallin B chai 99.9 1E-23 3.5E-28 143.2 12.4 85 5-89 2-86 (90)
6 2bol_A TSP36, small heat shock 99.9 4.8E-23 1.6E-27 168.2 13.1 86 2-89 101-191 (314)
7 3gla_A Low molecular weight he 99.9 5.6E-22 1.9E-26 136.5 12.9 86 2-88 7-99 (100)
8 4fei_A Heat shock protein-rela 99.9 1.7E-21 5.7E-26 135.0 13.0 87 2-89 9-97 (102)
9 4eld_A MJ16.5-P1, small heat s 99.9 3.2E-22 1.1E-26 149.0 9.8 95 2-100 59-161 (161)
10 3aab_A Putative uncharacterize 99.9 1.8E-21 6.3E-26 138.9 11.3 86 2-89 27-118 (123)
11 1gme_A Heat shock protein 16.9 99.8 7.2E-21 2.5E-25 140.5 10.1 97 2-100 46-150 (151)
12 2bol_A TSP36, small heat shock 99.7 3.7E-18 1.3E-22 139.3 7.7 79 7-86 231-313 (314)
13 3l1e_A Alpha-crystallin A chai 99.4 1.8E-12 6.3E-17 90.0 8.2 85 53-142 13-105 (106)
14 2wj5_A Heat shock protein beta 99.2 2.3E-11 8E-16 83.6 7.8 82 53-142 12-99 (101)
15 2klr_A Alpha-crystallin B chai 99.2 2.1E-11 7.2E-16 91.8 7.2 86 53-145 74-165 (175)
16 4eld_A MJ16.5-P1, small heat s 99.2 7.5E-11 2.6E-15 87.3 8.6 84 53-142 67-161 (161)
17 1gme_A Heat shock protein 16.9 99.2 1.1E-10 3.8E-15 85.7 9.2 87 53-142 54-150 (151)
18 3q9p_A Heat shock protein beta 99.1 2.1E-10 7.3E-15 76.5 8.4 71 53-128 8-84 (85)
19 2y1y_A Alpha-crystallin B chai 99.1 3.3E-10 1.1E-14 76.2 8.1 75 53-132 7-87 (90)
20 3gla_A Low molecular weight he 99.1 3.1E-10 1.1E-14 77.3 7.5 71 53-129 15-98 (100)
21 4fei_A Heat shock protein-rela 98.9 5.9E-09 2E-13 71.5 7.9 71 53-129 17-95 (102)
22 3aab_A Putative uncharacterize 98.8 6.1E-09 2.1E-13 73.6 6.3 71 53-129 35-116 (123)
23 1rl1_A Suppressor of G2 allele 98.8 8.3E-09 2.8E-13 71.8 6.5 101 2-116 12-112 (114)
24 2xcm_C SGT1-like protein, cyto 98.7 4.5E-08 1.6E-12 65.2 6.9 77 2-87 5-81 (92)
25 2k8q_A Protein SHQ1; beta-sand 97.6 0.0001 3.5E-09 52.9 5.4 75 2-89 6-84 (134)
26 3eud_A Protein SHQ1; CS domain 97.6 0.0013 4.5E-08 45.9 10.7 75 2-89 20-98 (115)
27 1wgv_A KIAA1068 protein; CS do 97.1 0.0073 2.5E-07 42.1 10.5 95 5-113 25-122 (124)
28 1x5m_A Calcyclin-binding prote 97.1 0.0062 2.1E-07 42.7 9.8 75 5-88 26-104 (127)
29 3igf_A ALL4481 protein; two-do 97.0 0.0013 4.5E-08 54.4 6.7 63 10-86 306-369 (374)
30 1wh0_A Ubiquitin carboxyl-term 96.7 0.0081 2.8E-07 42.8 8.1 81 5-87 25-111 (134)
31 3qor_A Nuclear migration prote 96.7 0.01 3.6E-07 41.3 8.4 95 4-114 21-119 (121)
32 1rl1_A Suppressor of G2 allele 96.2 0.029 9.8E-07 38.1 7.9 69 53-129 20-88 (114)
33 1wfi_A Nuclear distribution ge 96.2 0.033 1.1E-06 39.0 8.4 72 5-88 13-88 (131)
34 2o30_A Nuclear movement protei 96.1 0.054 1.8E-06 38.0 9.5 69 5-86 10-79 (131)
35 1ejf_A Progesterone receptor P 96.1 0.031 1.1E-06 38.9 8.1 74 5-88 9-82 (125)
36 2xcm_C SGT1-like protein, cyto 96.0 0.047 1.6E-06 35.4 8.0 69 53-129 13-81 (92)
37 2rh0_A NUDC domain-containing 95.9 0.058 2E-06 39.2 9.1 72 4-88 18-91 (157)
38 2cg9_X CO-chaperone protein SB 95.6 0.01 3.5E-07 42.1 3.8 75 8-87 22-97 (134)
39 2kmw_A Uncharacterized protein 94.3 0.11 3.8E-06 37.5 6.3 72 5-88 10-82 (150)
40 1wgv_A KIAA1068 protein; CS do 87.7 3.1 0.00011 28.4 7.7 70 53-129 30-101 (124)
41 1x5m_A Calcyclin-binding prote 86.5 4.5 0.00015 27.7 8.0 70 53-129 31-103 (127)
42 2o30_A Nuclear movement protei 84.2 3.6 0.00012 28.4 6.6 65 53-128 15-79 (131)
43 2rh0_A NUDC domain-containing 77.6 15 0.00053 26.1 8.2 66 53-129 24-90 (157)
44 3qor_A Nuclear migration prote 77.0 14 0.0005 24.9 7.9 67 53-129 27-96 (121)
45 1wfi_A Nuclear distribution ge 73.7 5.3 0.00018 27.5 4.7 67 53-129 18-87 (131)
46 3eud_A Protein SHQ1; CS domain 69.2 24 0.00082 24.2 7.1 65 55-129 30-96 (115)
47 2cql_A OK/SW-CL.103, 60S ribos 65.2 13 0.00046 24.6 5.1 20 22-41 20-39 (100)
48 1wh0_A Ubiquitin carboxyl-term 61.8 37 0.0013 23.5 7.4 71 55-129 33-111 (134)
49 1rl6_A Protein (ribosomal prot 58.9 19 0.00066 26.3 5.4 46 22-86 11-56 (177)
50 2k8q_A Protein SHQ1; beta-sand 54.4 15 0.00053 25.8 4.0 63 57-129 18-82 (134)
51 3v2d_H 50S ribosomal protein L 54.2 23 0.00078 26.0 5.1 44 22-84 12-55 (180)
52 3h0x_A 78 kDa glucose-regulate 51.1 26 0.00088 24.7 4.9 40 69-111 85-124 (152)
53 1nkw_E 50S ribosomal protein L 50.7 39 0.0013 25.5 6.0 47 21-86 38-84 (212)
54 1vq8_E 50S ribosomal protein L 50.0 33 0.0011 25.1 5.4 47 22-86 9-55 (178)
55 1ejf_A Progesterone receptor P 50.0 30 0.001 23.3 5.0 68 53-129 14-81 (125)
56 3j21_F 50S ribosomal protein L 47.6 16 0.00054 27.0 3.3 28 54-87 7-34 (184)
57 3dob_A Heat shock 70 kDa prote 47.5 21 0.00071 25.2 3.9 41 68-111 84-124 (152)
58 1q5l_A Chaperone protein DNAK; 47.0 39 0.0013 23.2 5.2 31 69-102 102-132 (135)
59 2op6_A Heat shock 70 kDa prote 46.8 27 0.00092 24.3 4.4 40 69-111 85-124 (152)
60 3dqg_A Heat shock 70 kDa prote 44.2 37 0.0013 23.8 4.8 40 68-111 84-123 (151)
61 3j21_F 50S ribosomal protein L 42.0 31 0.0011 25.4 4.2 45 22-84 14-58 (184)
62 3u5e_H L8, RP24, YL11, 60S rib 40.6 25 0.00084 26.1 3.5 28 54-87 6-33 (191)
63 3u5e_H L8, RP24, YL11, 60S rib 38.8 94 0.0032 22.9 6.4 46 22-85 13-59 (191)
64 1vq8_E 50S ribosomal protein L 38.7 28 0.00095 25.5 3.5 27 55-87 3-29 (178)
65 3iz5_F 60S ribosomal protein L 37.4 27 0.00092 25.9 3.2 27 55-87 7-33 (190)
66 2ks0_A Uncharacterized protein 37.0 18 0.0006 22.6 1.8 25 16-40 14-38 (71)
67 1ew4_A CYAY protein; friedreic 36.8 21 0.00073 23.9 2.4 17 67-84 28-44 (106)
68 3n8e_A Stress-70 protein, mito 36.8 43 0.0015 24.3 4.3 39 68-110 104-142 (182)
69 2gjh_A Designed protein; oblig 36.0 23 0.00078 20.8 2.1 21 22-42 32-52 (62)
70 4a17_E RPL9, 60S ribosomal pro 33.1 25 0.00086 26.0 2.5 27 55-87 7-33 (188)
71 1qys_A TOP7; alpha-beta, novel 32.9 39 0.0013 21.7 3.0 21 22-42 76-96 (106)
72 2zkr_e 60S ribosomal protein L 32.7 85 0.0029 23.1 5.3 53 16-86 7-62 (192)
73 3oeq_A Frataxin homolog, mitoc 32.4 41 0.0014 23.2 3.3 15 69-84 49-63 (123)
74 1jkg_B TAP; NTF2-like domain, 31.6 80 0.0027 24.0 5.2 50 33-86 123-172 (250)
75 3t3l_A Frataxin, mitochondrial 27.3 35 0.0012 23.6 2.3 17 67-84 40-56 (129)
76 2nwt_A UPF0165 protein AF_2212 26.2 80 0.0027 19.6 3.5 32 67-101 3-34 (69)
77 3h0x_A 78 kDa glucose-regulate 25.9 1.7E+02 0.0057 20.3 6.1 33 8-40 61-101 (152)
78 1n91_A ORF, hypothetical prote 25.1 1.3E+02 0.0044 20.1 4.7 36 4-40 8-44 (108)
79 4e81_A Chaperone protein DNAK; 25.1 98 0.0034 23.0 4.6 32 68-102 85-116 (219)
80 1of5_A MRNA export factor MEX6 24.3 1.4E+02 0.0047 22.4 5.3 33 50-87 174-206 (221)
81 2kgs_A Uncharacterized protein 23.4 44 0.0015 22.9 2.2 69 17-89 2-98 (132)
82 3r8s_G 50S ribosomal protein L 21.8 37 0.0013 24.7 1.6 25 57-87 7-31 (176)
83 2uwa_A Cellulase; glycoside hy 21.4 1.1E+02 0.0037 23.6 4.3 42 20-63 30-74 (274)
84 3bbo_I Ribosomal protein L6; l 20.9 41 0.0014 25.5 1.7 25 57-87 50-74 (223)
85 4a17_E RPL9, 60S ribosomal pro 20.4 81 0.0028 23.2 3.2 22 20-41 11-32 (188)
No 1
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.95 E-value=8.9e-27 Score=163.00 Aligned_cols=101 Identities=44% Similarity=0.786 Sum_probs=90.9
Q ss_pred CeeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEE
Q psy6564 1 MLATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLS 80 (150)
Q Consensus 1 ~~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~ 80 (150)
+.+++|+++.|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++++|+|+.||+|+
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~ 83 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLT 83 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 35789999999999999999999999999999999999988766677898999999999999999999999997799999
Q ss_pred EEeecccccc--CCCceEEEeec
Q psy6564 81 IQAPKKAVEA--GAGERAIPVVQ 101 (150)
Q Consensus 81 I~~pk~~~~~--~~~~r~I~I~~ 101 (150)
|++||..+.. ....|.|+|++
T Consensus 84 I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 84 FSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp EEEEBCCCCTTTTSSSCCCCCCC
T ss_pred EEEEccCcccccCCCCeEeeecC
Confidence 9999988752 23688888864
No 2
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=7.7e-26 Score=156.89 Aligned_cols=89 Identities=52% Similarity=0.782 Sum_probs=82.5
Q ss_pred CeeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEE
Q psy6564 1 MLATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLS 80 (150)
Q Consensus 1 ~~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~ 80 (150)
+++++|+++.|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++++|+|+.||+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEE
Confidence 46889999999999999999999999999999999999998766666788899999999999999999999996699999
Q ss_pred EEeeccccc
Q psy6564 81 IQAPKKAVE 89 (150)
Q Consensus 81 I~~pk~~~~ 89 (150)
|++||..+.
T Consensus 83 I~lPK~~~~ 91 (101)
T 2wj5_A 83 IQATPASAQ 91 (101)
T ss_dssp EEECBCCCC
T ss_pred EEEECCCcC
Confidence 999998755
No 3
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=5.7e-25 Score=166.33 Aligned_cols=102 Identities=50% Similarity=0.806 Sum_probs=77.9
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEE
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSI 81 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I 81 (150)
+++.|+++.|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|.|+|.||.+||.++|+|+|++||+|+|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 47889999999999999999999999999999999999887666778999999999999999999999999966999999
Q ss_pred EeeccccccCCCceEEEeecCCCC
Q psy6564 82 QAPKKAVEAGAGERAIPVVQTPDS 105 (150)
Q Consensus 82 ~~pk~~~~~~~~~r~I~I~~~~~~ 105 (150)
++||..+. ...|.|+|+..+.+
T Consensus 146 ~lPK~~~~--~~~r~I~I~~~~~~ 167 (175)
T 2klr_A 146 NGPRKQVS--GPERTIPITREEKP 167 (175)
T ss_dssp EEECC-------------------
T ss_pred EEECCCCC--CCCeEEEEecCCcc
Confidence 99998654 34689999876443
No 4
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.92 E-value=9.5e-25 Score=147.01 Aligned_cols=82 Identities=41% Similarity=0.720 Sum_probs=71.0
Q ss_pred EEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecC-CCEEEEE
Q psy6564 4 TTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSS-DGVLSIQ 82 (150)
Q Consensus 4 i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~-dGvL~I~ 82 (150)
++|+++.|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|.|+|.||.+||+++|+|+| . ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~-~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSL-SPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEE-CTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEE-CCCCEEEEE
Confidence 4688999999999999999999999999999999998866555567778999999999999999999999 6 9999999
Q ss_pred eecc
Q psy6564 83 APKK 86 (150)
Q Consensus 83 ~pk~ 86 (150)
+||.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9985
No 5
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=1e-23 Score=143.24 Aligned_cols=85 Identities=54% Similarity=0.882 Sum_probs=73.8
Q ss_pred EEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEee
Q psy6564 5 TAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 5 ~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~p 84 (150)
.++++.|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|.|+|.||.+||.++++|+|+.||+|+|++|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 46889999999999999999999999999999999887666677888999999999999999999999966999999999
Q ss_pred ccccc
Q psy6564 85 KKAVE 89 (150)
Q Consensus 85 k~~~~ 89 (150)
|..+.
T Consensus 82 K~~~~ 86 (90)
T 2y1y_A 82 RKQVS 86 (90)
T ss_dssp BC---
T ss_pred cCCCC
Confidence 98754
No 6
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.89 E-value=4.8e-23 Score=168.17 Aligned_cols=86 Identities=29% Similarity=0.388 Sum_probs=76.5
Q ss_pred eeEEEcCC----eEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecC-C
Q psy6564 2 LATTAAEI----EGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSS-D 76 (150)
Q Consensus 2 ~~i~e~~~----~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~-d 76 (150)
++++|+++ +|.|.++||||+++||+|+++++.|+|+|+++... +.+..+++|.|+|.||.+||.++|+|+| . |
T Consensus 101 vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~-~~n 178 (314)
T 2bol_A 101 KDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATI-TTD 178 (314)
T ss_dssp GGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEE-CSS
T ss_pred cceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEE-eCC
Confidence 46788888 99999999999999999999999999999987543 3345567999999999999999999999 7 9
Q ss_pred CEEEEEeeccccc
Q psy6564 77 GVLSIQAPKKAVE 89 (150)
Q Consensus 77 GvL~I~~pk~~~~ 89 (150)
|+|+|++||..+.
T Consensus 179 GVL~I~lPK~~~~ 191 (314)
T 2bol_A 179 DVLVIEAPVNEPN 191 (314)
T ss_dssp SEEEEEEEBSSCC
T ss_pred CEEEEEEeccCcc
Confidence 9999999997654
No 7
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.88 E-value=5.6e-22 Score=136.53 Aligned_cols=86 Identities=24% Similarity=0.447 Sum_probs=75.5
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecC--CCceEEE-----EEEEEEECCCCCCcCCcEEEec
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSD--QHGFISR-----EFTRRYKIPDSVDANAISSKLS 74 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~--~~~~~~r-----~f~r~~~LP~~vd~~~i~a~~~ 74 (150)
+++.|+++.|.|.++||||+++||+|+++++.|+|+|++..... ...|.++ +|.|+|.||.+||.++++|+|
T Consensus 7 ~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~- 85 (100)
T 3gla_A 7 VDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG- 85 (100)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE-
T ss_pred EEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE-
Confidence 68999999999999999999999999999999999999875432 2335443 799999999999999999999
Q ss_pred CCCEEEEEeecccc
Q psy6564 75 SDGVLSIQAPKKAV 88 (150)
Q Consensus 75 ~dGvL~I~~pk~~~ 88 (150)
.||+|+|++||.++
T Consensus 86 ~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 86 RNGVLEIRIPKRPA 99 (100)
T ss_dssp ETTEEEEEEEBC--
T ss_pred eCCEEEEEEecCCC
Confidence 89999999999864
No 8
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.87 E-value=1.7e-21 Score=135.00 Aligned_cols=87 Identities=17% Similarity=0.159 Sum_probs=76.1
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCC--ceEEEEEEEEEECCCCCCcCCcEEEecCCCEE
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQH--GFISREFTRRYKIPDSVDANAISSKLSSDGVL 79 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~--~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL 79 (150)
+++.|+++.|.|.++||||+++||+|+++++.|+|+|+++....-. .....+|.|+|.||.+||.+.++|+| +||+|
T Consensus 9 ~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~GvL 87 (102)
T 4fei_A 9 ADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL-AGGVL 87 (102)
T ss_dssp EEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ETTEE
T ss_pred EEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE-ECCEE
Confidence 6899999999999999999999999999999999999986421111 12345899999999999999999999 89999
Q ss_pred EEEeeccccc
Q psy6564 80 SIQAPKKAVE 89 (150)
Q Consensus 80 ~I~~pk~~~~ 89 (150)
+|++||..+.
T Consensus 88 ~I~lpK~~~~ 97 (102)
T 4fei_A 88 TVRFEKLRPT 97 (102)
T ss_dssp EEEEEBSSCC
T ss_pred EEEEEccCcc
Confidence 9999998765
No 9
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.87 E-value=3.2e-22 Score=148.97 Aligned_cols=95 Identities=22% Similarity=0.300 Sum_probs=81.6
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeec--CCCceEE------EEEEEEEECCCCCCcCCcEEEe
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERS--DQHGFIS------REFTRRYKIPDSVDANAISSKL 73 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~--~~~~~~~------r~f~r~~~LP~~vd~~~i~a~~ 73 (150)
+++.|+++.|.|.++||||+++||+|+++++.|+|+|+++... +..++.+ .+|.|+|.||.+||.++++|+|
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 5899999999999999999999999999999999999987632 2223332 2799999999999999999999
Q ss_pred cCCCEEEEEeeccccccCCCceEEEee
Q psy6564 74 SSDGVLSIQAPKKAVEAGAGERAIPVV 100 (150)
Q Consensus 74 ~~dGvL~I~~pk~~~~~~~~~r~I~I~ 100 (150)
+||+|+|++||.... ..|.|+|+
T Consensus 139 -~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 139 -ENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp -ETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred -ECCEEEEEEEcCCCC---CCcEeecC
Confidence 899999999998765 46777764
No 10
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.86 E-value=1.8e-21 Score=138.88 Aligned_cols=86 Identities=21% Similarity=0.243 Sum_probs=77.9
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEEC-CEEEEEEEEeeecCCCceEEE----EEEEEEECCCCCCcCCc-EEEecC
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVD-KYIVVHAKHEERSDQHGFISR----EFTRRYKIPDSVDANAI-SSKLSS 75 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~r----~f~r~~~LP~~vd~~~i-~a~~~~ 75 (150)
+++.+++++|.|.++||||+++||+|++++ +.|+|+|+++... +.+|.++ +|.|+|.||.+||.+++ +|+| .
T Consensus 27 ~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~-~ 104 (123)
T 3aab_A 27 VDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY-E 104 (123)
T ss_dssp EEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE-E
T ss_pred EEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE-c
Confidence 688999999999999999999999999999 9999999987654 4456555 89999999999999999 9999 8
Q ss_pred CCEEEEEeeccccc
Q psy6564 76 DGVLSIQAPKKAVE 89 (150)
Q Consensus 76 dGvL~I~~pk~~~~ 89 (150)
||+|+|++||....
T Consensus 105 ~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 105 NGVLTIRIPIAGTS 118 (123)
T ss_dssp TTEEEEEEEGGGEE
T ss_pred CCEEEEEEEcCCCC
Confidence 99999999998754
No 11
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.84 E-value=7.2e-21 Score=140.50 Aligned_cols=97 Identities=21% Similarity=0.406 Sum_probs=81.3
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEE-CCEEEEEEEEeeecC--CCceEE-----EEEEEEEECCCCCCcCCcEEEe
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVV-DKYIVVHAKHEERSD--QHGFIS-----REFTRRYKIPDSVDANAISSKL 73 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~~~~~~--~~~~~~-----r~f~r~~~LP~~vd~~~i~a~~ 73 (150)
+++.|+++.|.|.++||||+++||+|+++ ++.|+|+|+++.... +.+|++ ++|.|+|.||.+||.++++|+|
T Consensus 46 ~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~ 125 (151)
T 1gme_A 46 MDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL 125 (151)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEE
Confidence 68999999999999999999999999995 789999998775432 233443 2799999999999999999999
Q ss_pred cCCCEEEEEeeccccccCCCceEEEee
Q psy6564 74 SSDGVLSIQAPKKAVEAGAGERAIPVV 100 (150)
Q Consensus 74 ~~dGvL~I~~pk~~~~~~~~~r~I~I~ 100 (150)
+||+|+|++||..+.. ...+.|+|+
T Consensus 126 -~nGvL~I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 126 -ENGVLTVTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp -ETTEEEEEEECCCCCT-TCCCCCCCC
T ss_pred -ECCEEEEEEEccCcCC-CCCeEeeeC
Confidence 8999999999987542 235666664
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.73 E-value=3.7e-18 Score=139.31 Aligned_cols=79 Identities=23% Similarity=0.409 Sum_probs=65.4
Q ss_pred cCCeEEEEEEe-CCCCCCCeEEEEECCEEEEEEEEeeecCCC---ceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEE
Q psy6564 7 AEIEGTVNLDV-QQFKPEEIDVKVVDKYIVVHAKHEERSDQH---GFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQ 82 (150)
Q Consensus 7 ~~~~~~v~~dl-pG~~~edI~V~v~~~~L~I~g~~~~~~~~~---~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~ 82 (150)
+++.|.+.++| |||+++||+|++++|.|+|+|+++.+.+.. +..+.+|+|+|.||.+||+++|+|+| .||+|+|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEI-VDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEE-ETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEE-eCCEEEEE
Confidence 34689999999 999999999999999999999987654321 23345899999999999999999999 89999999
Q ss_pred eecc
Q psy6564 83 APKK 86 (150)
Q Consensus 83 ~pk~ 86 (150)
+||.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9985
No 13
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.37 E-value=1.8e-12 Score=90.01 Aligned_cols=85 Identities=27% Similarity=0.451 Sum_probs=66.1
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCC------ceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAG------ERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~------~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+........ .|.|.+.. .+|.+++.|+|+.||+|+|++|
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~---~vd~~~i~A~~s~~GvL~I~~P 87 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKV-QEDFVEIHGKHNERQDDHGYISREFHRRYRLPS---NVDQSALSCSLSADGMLTFSGP 87 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEEEETTTEEEEEEEEEEEECCT---TBCTTSCEEEECTTSEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccccCCCCEEEEEEEEEEECCC---CcChhHcEEEECCCCEEEEEEE
Confidence 578889995 89999999999 8999999998764432111 34445543 3999999999955999999999
Q ss_pred cccccC--CCCceEEeee
Q psy6564 127 KKAVEG--GAGERAIPVV 142 (150)
Q Consensus 127 k~~~~~--~~~~r~I~i~ 142 (150)
|.+.+. ..+.|.|||+
T Consensus 88 K~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 88 KIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp BCCCCTTTTSSSCCCCCC
T ss_pred ccCcccccCCCCeEeeec
Confidence 987542 2456999996
No 14
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.24 E-value=2.3e-11 Score=83.65 Aligned_cols=82 Identities=26% Similarity=0.347 Sum_probs=61.3
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCC------ceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAG------ERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~------~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+....++.. .|.+.+.. .+|.+++.|+|+.||+|+|++|
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~---~vd~~~i~A~~s~nGvL~I~lP 86 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEERPDEHGFIAREFHRRYRLPP---GVDPAAVTSALSPEGVLSIQAT 86 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEECSSTTCCEEEEEEEEEECCT---TBCTTCCEEEECTTSEEEEEEC
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEecccCCCCEEEEEEEEEEECCC---CcChhHCEEEECCCCEEEEEEE
Confidence 467789996 99999999999 7999999999875432111 34555554 3999999999955999999999
Q ss_pred cccccCCCCceEEeee
Q psy6564 127 KKAVEGGAGERAIPVV 142 (150)
Q Consensus 127 k~~~~~~~~~r~I~i~ 142 (150)
|.....+ |.++|.
T Consensus 87 K~~~~~~---~~~~i~ 99 (101)
T 2wj5_A 87 PASAQAS---LPSPPA 99 (101)
T ss_dssp BCCCCCS---SCC---
T ss_pred CCCcCCC---CCCccc
Confidence 9864443 566654
No 15
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.22 E-value=2.1e-11 Score=91.81 Aligned_cols=86 Identities=27% Similarity=0.486 Sum_probs=57.7
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCC------ceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAG------ERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~------~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+....++.+ .|.+.+... ||.++++|+|+.||||+|++|
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~---Vd~~~i~A~~s~dGvL~I~lP 148 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEERQDEHGFISREFHRKYRIPAD---VDPLTITSSLSSDGVLTVNGP 148 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEE-ETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTT---CCTTTCEEEECTTSCEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcccccCCceEEEEEEEEEECCCC---cChhHeEEEEcCCCEEEEEEE
Confidence 688889996 99999999999 7999999998865432111 355555543 999999999966999999999
Q ss_pred cccccCCCCceEEeeeecc
Q psy6564 127 KKAVEGGAGERAIPVVQTT 145 (150)
Q Consensus 127 k~~~~~~~~~r~I~i~~~~ 145 (150)
|.+.. ...|+|+|+.++
T Consensus 149 K~~~~--~~~r~I~I~~~~ 165 (175)
T 2klr_A 149 RKQVS--GPERTIPITREE 165 (175)
T ss_dssp CC-----------------
T ss_pred CCCCC--CCCeEEEEecCC
Confidence 97633 235999998763
No 16
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.18 E-value=7.5e-11 Score=87.27 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=64.6
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeec-CCC----------CCCccccccccCCCCeE
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQ-TPD----------SVDANAISSKLSSDGVL 121 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~-~~~----------~vd~~~v~~~~~~~GvL 121 (150)
.|.=.+.| ++++.++|+.++ .+|.|+|++.+....+.+..+.+..++ ..+ .+|.+++.|++. ||||
T Consensus 67 ~~~v~~dl-PG~~~edi~V~~-~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~~-nGvL 143 (161)
T 4eld_A 67 HIKVIAWL-PGVNKEDIILNA-VGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFE-NGVL 143 (161)
T ss_dssp EEEEEEEC-TTCCGGGEEEEE-ETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEEE-TTEE
T ss_pred EEEEEEEC-CCCChHhEEEEE-ECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEEE-CCEE
Confidence 57888899 589999999999 899999999988743323333443333 222 399999999998 9999
Q ss_pred EEEeecccccCCCCceEEeee
Q psy6564 122 SIQAPKKAVEGGAGERAIPVV 142 (150)
Q Consensus 122 ~i~~pk~~~~~~~~~r~I~i~ 142 (150)
+|++||.+... .|+|+|+
T Consensus 144 ~I~lpK~~~~~---~r~I~Ie 161 (161)
T 4eld_A 144 SVILPKAESSI---KKGINIE 161 (161)
T ss_dssp EEEEEBCGGGS---CCCCCCC
T ss_pred EEEEEcCCCCC---CcEeecC
Confidence 99999987544 3889884
No 17
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.18 E-value=1.1e-10 Score=85.71 Aligned_cols=87 Identities=16% Similarity=0.336 Sum_probs=65.0
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCC----------CCCccccccccCCCCeEE
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPD----------SVDANAISSKLSSDGVLS 122 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~----------~vd~~~v~~~~~~~GvL~ 122 (150)
.|.=.+.|| +++.++|+.++..++.|+|++.+....+.+..+.+..++.++ .+|.++++|++. ||+|+
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~-nGvL~ 131 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLE-NGVLT 131 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEE-TTEEE
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEE-CCEEE
Confidence 578889996 899999999993357999999988755333333333333322 399999999997 99999
Q ss_pred EEeecccccCCCCceEEeee
Q psy6564 123 IQAPKKAVEGGAGERAIPVV 142 (150)
Q Consensus 123 i~~pk~~~~~~~~~r~I~i~ 142 (150)
|++||..... ...|+|+|+
T Consensus 132 I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 132 VTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp EEEECCCCCT-TCCCCCCCC
T ss_pred EEEEccCcCC-CCCeEeeeC
Confidence 9999987433 345888885
No 18
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.14 E-value=2.1e-10 Score=76.45 Aligned_cols=71 Identities=24% Similarity=0.378 Sum_probs=55.8
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCC------CceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGA------GERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~------~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+.....+. -.|.|.+... +|.+++.|+++.||||+|++|
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~---vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAARQDEHGYISRCFTRKYTLPPG---VDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC-------CCCEEEEEEEECCTT---CCGGGCEEEECTTSEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccccCCCCEEEEEEEEEEECCCC---cChHHcEEEECCCCEEEEEEE
Confidence 578889995 89999999999 899999999987643211 1355555544 999999999988999999999
Q ss_pred cc
Q psy6564 127 KK 128 (150)
Q Consensus 127 k~ 128 (150)
|+
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 96
No 19
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.10 E-value=3.3e-10 Score=76.16 Aligned_cols=75 Identities=24% Similarity=0.423 Sum_probs=57.0
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCC------CceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGA------GERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~------~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+....+.. -.|.|.+... +|.+++.|+|+.||+|+|++|
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~---vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEERQDEHGFISREFHRKYRIPAD---VDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTT---BCGGGCEEEECTTSEEEEEEC
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEecccCCCCEEEEEEEEEEECCCC---cChhHcEEEECCCCEEEEEEE
Confidence 467788996 99999999999 799999999886543211 1345555544 999999999955999999999
Q ss_pred cccccC
Q psy6564 127 KKAVEG 132 (150)
Q Consensus 127 k~~~~~ 132 (150)
|...+.
T Consensus 82 K~~~~~ 87 (90)
T 2y1y_A 82 RKQVSG 87 (90)
T ss_dssp BC----
T ss_pred cCCCCC
Confidence 986444
No 20
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.09 E-value=3.1e-10 Score=77.34 Aligned_cols=71 Identities=28% Similarity=0.532 Sum_probs=57.0
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCc-------------eEEEeecCCCCCCccccccccCCCC
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGE-------------RAIPVVQTPDSVDANAISSKLSSDG 119 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~-------------r~I~I~~~~~~vd~~~v~~~~~~~G 119 (150)
.|.=.+.|| ++++++|+.++ .+|.|+|++.+....+.+.. |.|.+... +|.++++|+|+ ||
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~---vd~~~i~A~~~-~G 88 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQM-DKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDS---ADADGITAAGR-NG 88 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEE-ETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTT---BCTTSCEEEEE-TT
T ss_pred EEEEEEECC-CCCHHHEEEEE-ECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCC---cChHHeEEEEe-CC
Confidence 577788996 89999999999 89999999998765533332 34444433 99999999998 99
Q ss_pred eEEEEeeccc
Q psy6564 120 VLSIQAPKKA 129 (150)
Q Consensus 120 vL~i~~pk~~ 129 (150)
+|+|++||.+
T Consensus 89 vL~I~~pK~~ 98 (100)
T 3gla_A 89 VLEIRIPKRP 98 (100)
T ss_dssp EEEEEEEBC-
T ss_pred EEEEEEecCC
Confidence 9999999976
No 21
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.89 E-value=5.9e-09 Score=71.46 Aligned_cols=71 Identities=20% Similarity=0.275 Sum_probs=57.3
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccC--------CCceEEEeecCCCCCCccccccccCCCCeEEEE
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAG--------AGERAIPVVQTPDSVDANAISSKLSSDGVLSIQ 124 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~--------~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~ 124 (150)
.|.=.+.|| +++.++|+.++ .++.|+|++.+..+..- .-.|.|.+... +|.++++|+|. ||+|+|+
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~---vd~~~i~A~~~-~GvL~I~ 90 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAE-DGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEP---VRPASGVASLA-GGVLTVR 90 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEE-ETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSC---BCTTCCEEEEE-TTEEEEE
T ss_pred EEEEEEECC-CCchHhEEEEE-ECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCC---cchhHcEEEEE-CCEEEEE
Confidence 578889996 99999999999 89999999988542210 11455666554 99999999998 9999999
Q ss_pred eeccc
Q psy6564 125 APKKA 129 (150)
Q Consensus 125 ~pk~~ 129 (150)
+||..
T Consensus 91 lpK~~ 95 (102)
T 4fei_A 91 FEKLR 95 (102)
T ss_dssp EEBSS
T ss_pred EEccC
Confidence 99976
No 22
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.83 E-value=6.1e-09 Score=73.64 Aligned_cols=71 Identities=24% Similarity=0.338 Sum_probs=56.8
Q ss_pred EEEEEEECCCCCCcCCcEEEecCC-CEEEEEeeccccccC---------CCceEEEeecCCCCCCcccc-ccccCCCCeE
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSD-GVLSIQAPKKAVEAG---------AGERAIPVVQTPDSVDANAI-SSKLSSDGVL 121 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~d-GvL~I~~pk~~~~~~---------~~~r~I~I~~~~~~vd~~~v-~~~~~~~GvL 121 (150)
.|.=.+.|| ++++++|+.++ .+ |.|+|++.+...... .-.|.+.+... +|.+++ +|++. ||+|
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~---vd~~~i~~A~~~-~GvL 108 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARV-SGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYN---VAKDAEISGKYE-NGVL 108 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSE---ECTTCCCEEEEE-TTEE
T ss_pred EEEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCC---cCcchhCeeEEc-CCEE
Confidence 578888996 89999999999 68 999999998764310 11344555443 999999 99998 9999
Q ss_pred EEEeeccc
Q psy6564 122 SIQAPKKA 129 (150)
Q Consensus 122 ~i~~pk~~ 129 (150)
+|++||..
T Consensus 109 ~I~lPK~~ 116 (123)
T 3aab_A 109 TIRIPIAG 116 (123)
T ss_dssp EEEEEGGG
T ss_pred EEEEEcCC
Confidence 99999976
No 23
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.81 E-value=8.3e-09 Score=71.77 Aligned_cols=101 Identities=10% Similarity=0.135 Sum_probs=72.3
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEE
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSI 81 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I 81 (150)
++-.++++.+.|.+.+||++++++.|.+.++.|.|+++.. ++ ..|...+.|+..|++++.++++ .+|.|.|
T Consensus 12 ~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~e~s~~~~-~~~~l~i 82 (114)
T 1rl1_A 12 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---SG-----EDYNLKLELLHPIIPEQSTFKV-LSTKIEI 82 (114)
T ss_dssp EEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---TS-----SEEEEEECBSSCCCGGGEEEEE-CSSSEEE
T ss_pred ccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---CC-----cEEEEEeeCCCcCCccccEEEE-ECCEEEE
Confidence 4568899999999999999999999999999999998653 11 2578899999999999999999 7999999
Q ss_pred EeeccccccCCCceEEEeecCCCCCCccccccccC
Q psy6564 82 QAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLS 116 (150)
Q Consensus 82 ~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~ 116 (150)
+++|..+ ...-.+.......|..++.++-|
T Consensus 83 ~L~K~~~-----~~W~~L~~~~~~~~~~~i~~~~~ 112 (114)
T 1rl1_A 83 KLKKPEA-----VRWEKLEGQGDVPTPKQFVADVK 112 (114)
T ss_dssp EEECSSC-----CCCSSSBTTC-------------
T ss_pred EEEcCCC-----CcCccccccCCccCCcccCCCcC
Confidence 9999753 23444444444456666655443
No 24
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.69 E-value=4.5e-08 Score=65.22 Aligned_cols=77 Identities=6% Similarity=0.052 Sum_probs=67.1
Q ss_pred eeEEEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEE
Q psy6564 2 LATTAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSI 81 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I 81 (150)
++-.++++.+.|.+.+||+.++++.|.+.++.|.|+++.. ++ ..|...+.|+..|++++.++++ .+|.|.|
T Consensus 5 ~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~~~s~~~~-~~~~l~i 75 (92)
T 2xcm_C 5 HEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---GE-----DAYYLQPRLFGKIIPDKCKYEV-LSTKIEI 75 (92)
T ss_dssp EEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---TS-----CCEEECCBBSSCBCGGGCEEEE-CSSCEEE
T ss_pred ccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---CC-----cEEEEeeEcCCccCchhEEEEE-ECCEEEE
Confidence 3457889999999999999999999999999999987642 11 2578889999999999999999 7999999
Q ss_pred Eeeccc
Q psy6564 82 QAPKKA 87 (150)
Q Consensus 82 ~~pk~~ 87 (150)
+++|..
T Consensus 76 ~L~K~~ 81 (92)
T 2xcm_C 76 CLAKAD 81 (92)
T ss_dssp EEEBSS
T ss_pred EEEcCC
Confidence 999975
No 25
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.0001 Score=52.93 Aligned_cols=75 Identities=12% Similarity=0.284 Sum_probs=63.8
Q ss_pred eeEEEcCCeEEEEEEeCCCC--CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCC-CcCCcEEEec-CCC
Q psy6564 2 LATTAAEIEGTVNLDVQQFK--PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSV-DANAISSKLS-SDG 77 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~v-d~~~i~a~~~-~dG 77 (150)
+.+..+++.+.|.+.+|..+ ..++.+.+++..+..... -|+=++.||..| |.+.-+|+|. +.|
T Consensus 6 F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-------------PYyLRL~LP~~V~e~~~~kA~YD~d~~ 72 (134)
T 2k8q_A 6 FSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDSKDE 72 (134)
T ss_dssp EEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-------------SSCEEECCSSCEECCSSCEEEEETTTT
T ss_pred EEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-------------CeEEEecCCCeeecCCCcceeEeccCC
Confidence 46788999999999999999 899999999998877421 245669999998 8888999994 699
Q ss_pred EEEEEeeccccc
Q psy6564 78 VLSIQAPKKAVE 89 (150)
Q Consensus 78 vL~I~~pk~~~~ 89 (150)
.|+|++||..+-
T Consensus 73 ~~~VtLpK~~~G 84 (134)
T 2k8q_A 73 CINVKVAKLNKN 84 (134)
T ss_dssp EEEEEEEESSTT
T ss_pred EEEEEEeCCCCC
Confidence 999999998755
No 26
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0013 Score=45.85 Aligned_cols=75 Identities=12% Similarity=0.284 Sum_probs=62.3
Q ss_pred eeEEEcCCeEEEEEEeCCCC--CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCC-CcCCcEEEec-CCC
Q psy6564 2 LATTAAEIEGTVNLDVQQFK--PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSV-DANAISSKLS-SDG 77 (150)
Q Consensus 2 ~~i~e~~~~~~v~~dlpG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~v-d~~~i~a~~~-~dG 77 (150)
+.+..+++.+.|.+-+|..+ ..++.+.++++.+....+ -|+=++.||..+ +.+.-+|+|. ++|
T Consensus 20 F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-------------PYyLRL~lP~~vved~~~~A~YD~d~g 86 (115)
T 3eud_A 20 FSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDSKDE 86 (115)
T ss_dssp EEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-------------TEEEEEECSSCEECSTTCEEEEETTTT
T ss_pred EEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-------------CeEEEEecCcceecCCCcceEEeCCCc
Confidence 46788999999999999866 789999999998877532 256679999987 7777889983 799
Q ss_pred EEEEEeeccccc
Q psy6564 78 VLSIQAPKKAVE 89 (150)
Q Consensus 78 vL~I~~pk~~~~ 89 (150)
.++|++||..+-
T Consensus 87 ~~~v~lpK~~~G 98 (115)
T 3eud_A 87 CINVKVAKLNKN 98 (115)
T ss_dssp EEEEEEEESSTT
T ss_pred EEEEEEcCCcCC
Confidence 999999998754
No 27
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.12 E-value=0.0073 Score=42.15 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=67.9
Q ss_pred EEcCCeEEEEEEeC-CC-CCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCE-EEE
Q psy6564 5 TAAEIEGTVNLDVQ-QF-KPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGV-LSI 81 (150)
Q Consensus 5 ~e~~~~~~v~~dlp-G~-~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGv-L~I 81 (150)
..+.+.+.|.+.|| |. +++|+.|.+..+.|.|..+.. . +. .+.-...|...|++++-..++ .++. |.|
T Consensus 25 ~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~---~--~~---~~~~~~~L~~~I~~e~S~w~i-~~~k~v~i 95 (124)
T 1wgv_A 25 SQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE---N--GE---RVLMEGKLTHKINTESSLWSL-EPGKCVLV 95 (124)
T ss_dssp EEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS---S--SE---EEEEEEEBSSCBCTTTCEEEE-CTTSEEEE
T ss_pred EEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc---C--CC---ceEEcccccCcCCCcCCEEEE-eCCCEEEE
Confidence 56788999999998 87 899999999999999986531 1 11 233456799999999988888 6775 999
Q ss_pred EeeccccccCCCceEEEeecCCCCCCcccccc
Q psy6564 82 QAPKKAVEAGAGERAIPVVQTPDSVDANAISS 113 (150)
Q Consensus 82 ~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~ 113 (150)
.+.|... ...=.+..+.+.+|..++.+
T Consensus 96 ~L~K~~~-----~~W~~L~~~~~~id~~ki~~ 122 (124)
T 1wgv_A 96 NLSKVGE-----YWWNAILEGEEPIDIDSGPS 122 (124)
T ss_dssp EECBSSS-----CCCSCSBTTSCCCSCCCSCC
T ss_pred EEEECCC-----CCCcCcccCCCccChhhcCC
Confidence 9999742 22223333333456655553
No 28
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.0062 Score=42.67 Aligned_cols=75 Identities=11% Similarity=0.179 Sum_probs=61.9
Q ss_pred EEcCCeEEEEEEeCCC---CCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEE-CCCCCCcCCcEEEecCCCEEE
Q psy6564 5 TAAEIEGTVNLDVQQF---KPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYK-IPDSVDANAISSKLSSDGVLS 80 (150)
Q Consensus 5 ~e~~~~~~v~~dlpG~---~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~-LP~~vd~~~i~a~~~~dGvL~ 80 (150)
..+.+.+.|.+.++|. .++++.|.+..+.|.|++... ++ ..|.-.+. |-..|++++-+..+ .++.+.
T Consensus 26 ~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~---~~-----~~y~~~~~~L~~~I~~e~S~~~v-~~~kVe 96 (127)
T 1x5m_A 26 DQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL---NG-----KSYSMIVNNLLKPISVEGSSKKV-KTDTVL 96 (127)
T ss_dssp EEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC---SS-----SCEEEEEECBSSCCCTTTCEEEE-ETTEEE
T ss_pred EcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC---CC-----CcEEEEhHHhcCccCcccCEEEE-eCCEEE
Confidence 5678999999999998 899999999999999987422 11 13566774 99999999988888 689999
Q ss_pred EEeecccc
Q psy6564 81 IQAPKKAV 88 (150)
Q Consensus 81 I~~pk~~~ 88 (150)
|++.|..+
T Consensus 97 i~L~K~~~ 104 (127)
T 1x5m_A 97 ILCRKKVE 104 (127)
T ss_dssp EEEECSSS
T ss_pred EEEEECCC
Confidence 99999753
No 29
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.01 E-value=0.0013 Score=54.36 Aligned_cols=63 Identities=16% Similarity=0.255 Sum_probs=53.4
Q ss_pred eEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCC-cEEEecCCCEEEEEeecc
Q psy6564 10 EGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANA-ISSKLSSDGVLSIQAPKK 86 (150)
Q Consensus 10 ~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~-i~a~~~~dGvL~I~~pk~ 86 (150)
.|.+.+.|||+++++|++.-.++.|+|++- .|+|.+.||...-.-. ..|.| +||.|+|++-..
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~gdeL~v~~g-------------~~rR~i~LP~~L~~~~v~~A~~-~~~~L~i~~~~~ 369 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYGPEVTVEAG-------------DQRRNIFLPPALSGRPITGAKF-QNNYLIISFLEH 369 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEETTEEEEEET-------------TEEEEEECCTTTTTCCEEEEEE-ETTEEEEEECCC
T ss_pred cEEEEEECCCCCHHHeEEEEECCeEEEEEC-------------CEeecccCCHHHcCCCccccEE-ECCEEEEEEehh
Confidence 799999999999999999999999999751 3799999998865543 45889 999999998543
No 30
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.72 E-value=0.0081 Score=42.81 Aligned_cols=81 Identities=10% Similarity=0.099 Sum_probs=62.5
Q ss_pred EEc-CCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeec-----CCCceEEEEEEEEEECCCCCCcCCcEEEecCCCE
Q psy6564 5 TAA-EIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERS-----DQHGFISREFTRRYKIPDSVDANAISSKLSSDGV 78 (150)
Q Consensus 5 ~e~-~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~-----~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGv 78 (150)
+.+ .+.+.|.+.++++.++++.|.+..+.|.|+.+..... ...+- ...|.-.+.|-..|++++-+..+ .++.
T Consensus 25 ~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~-~~~y~~~~~L~~~I~pe~S~~~v-~~~k 102 (134)
T 1wh0_A 25 YEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGP-HTTFRWQVKLRNLIEPEQCTFCF-TASR 102 (134)
T ss_dssp EEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCT-TSCEEEEEEBSSCEEEEEEEEEE-CSSE
T ss_pred EcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCc-ceeEEEeccccccCCchhCEEEE-eCCE
Confidence 566 8899999999999999999999999999987543210 00000 01356677899999999988888 6899
Q ss_pred EEEEeeccc
Q psy6564 79 LSIQAPKKA 87 (150)
Q Consensus 79 L~I~~pk~~ 87 (150)
+.|.+.|..
T Consensus 103 IeI~L~K~e 111 (134)
T 1wh0_A 103 IDICLRKRQ 111 (134)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999874
No 31
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.70 E-value=0.01 Score=41.28 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=67.1
Q ss_pred EEEcCCeEEEEEEeC-C--CCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCC-EE
Q psy6564 4 TTAAEIEGTVNLDVQ-Q--FKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDG-VL 79 (150)
Q Consensus 4 i~e~~~~~~v~~dlp-G--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dG-vL 79 (150)
=..+.+.+.|.+.|| | .+.+|+.|.+..+.|.|..+-. . +.-...|...|++++-.-++ .+| .|
T Consensus 21 W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~------~-----~~~~g~L~~~I~~deS~w~i-~~~~~i 88 (121)
T 3qor_A 21 WTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ------P-----AIIDGELYNEVKVEESSWLI-ADGAVV 88 (121)
T ss_dssp EEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS------C-----CSEEEEBSSCBCGGGCEEEE-ETTTEE
T ss_pred EEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc------c-----eEEeccccccccccccEEEE-cCCCEE
Confidence 356788999999998 4 7889999999999999865321 1 12245788999999988888 787 99
Q ss_pred EEEeeccccccCCCceEEEeecCCCCCCccccccc
Q psy6564 80 SIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSK 114 (150)
Q Consensus 80 ~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~ 114 (150)
.|++.|.... ...=.+-.+.+.+|..++.++
T Consensus 89 ~i~L~K~~~~----~~W~~L~~~~~~id~~ki~pe 119 (121)
T 3qor_A 89 TVHLEKINKM----EWWSRLVSSDPEINTKKINPE 119 (121)
T ss_dssp EEEEEBSSSS----CCCSCSBTTSCCBCGGGCCTT
T ss_pred EEEEEECCCC----CCChhhhcCCCCCccceeCCC
Confidence 9999987532 122223233344666666554
No 32
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.17 E-value=0.029 Score=38.15 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=54.1
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCeEEEEeeccc
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~pk~~ 129 (150)
...=+|.+| ++..+++.+.+ .+..|+|.+.... .....+.+ .-.+.++++.....+. +|.|.|+++|..
T Consensus 20 ~V~v~i~l~-~v~~~~v~v~~-~~~~l~v~~~~~~----~~~y~~~~-~L~~~I~~e~s~~~~~-~~~l~i~L~K~~ 88 (114)
T 1rl1_A 20 QVVITLMIK-NVQKNDVNVEF-SEKELSALVKLPS----GEDYNLKL-ELLHPIIPEQSTFKVL-STKIEIKLKKPE 88 (114)
T ss_dssp EEEEEECCC-SCCGGGEEEEC-SSSCEEEEEECTT----SSEEEEEE-CBSSCCCGGGEEEEEC-SSSEEEEEECSS
T ss_pred EEEEEEEeC-CCCHHHCEEEE-EcCEEEEEEEeCC----CcEEEEEe-eCCCcCCccccEEEEE-CCEEEEEEEcCC
Confidence 567788898 89999999999 7888999986431 22344555 3456799999999998 799999999975
No 33
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.16 E-value=0.033 Score=39.03 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=57.4
Q ss_pred EEcCCeEEEEEEeC-C--CCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCC-EEE
Q psy6564 5 TAAEIEGTVNLDVQ-Q--FKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDG-VLS 80 (150)
Q Consensus 5 ~e~~~~~~v~~dlp-G--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dG-vL~ 80 (150)
..+.+.+.|.+.+| | ++++|+.|.+..+.|.|+.+.. . +.=...|...|++++-.-++ .+| .|.
T Consensus 13 ~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~------~-----~~~~~~L~~~I~~e~s~w~i-~~~k~v~ 80 (131)
T 1wfi_A 13 TQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ------P-----PVVDGELYNEVKVEESSWLI-EDGKVVT 80 (131)
T ss_dssp EECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS------C-----CSBCSCBSSCBCSTTCEEEE-ETTTEEE
T ss_pred EecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCc------e-----EEEecccccccccccCEEEE-cCCCEEE
Confidence 56788999999999 6 8899999999999999986411 0 11234578899999988888 677 899
Q ss_pred EEeecccc
Q psy6564 81 IQAPKKAV 88 (150)
Q Consensus 81 I~~pk~~~ 88 (150)
|.+.|..+
T Consensus 81 i~L~K~~~ 88 (131)
T 1wfi_A 81 VHLEKINK 88 (131)
T ss_dssp EEEEBSSS
T ss_pred EEEEECCC
Confidence 99999853
No 34
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.15 E-value=0.054 Score=38.00 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=55.4
Q ss_pred EEcCCeEEEEEEeC-CCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEe
Q psy6564 5 TAAEIEGTVNLDVQ-QFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQA 83 (150)
Q Consensus 5 ~e~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~ 83 (150)
..+.+.+.|.+.|| |++++|+.|.+..+.|.|+++ |. . .-...|...|++++-..++ .++.|.|.+
T Consensus 10 ~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~--------g~---~-~~~~~L~~~I~~e~S~w~i-~~~kv~i~L 76 (131)
T 2o30_A 10 DQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ--------GE---I-VIDGELLHEVDVSSLWWVI-NGDVVDVNV 76 (131)
T ss_dssp EEETTEEEEEEECC---CCSCEEEEEETTEEEEEET--------TE---E-EEEEEBSSCEEEEEEEEEE-ETTEEEEEE
T ss_pred EecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC--------CE---e-eEccccccccccccCEEEE-eCCEEEEEE
Confidence 56788999999995 899999999999999999863 11 1 2346788999999988888 688899999
Q ss_pred ecc
Q psy6564 84 PKK 86 (150)
Q Consensus 84 pk~ 86 (150)
.|.
T Consensus 77 ~K~ 79 (131)
T 2o30_A 77 TKK 79 (131)
T ss_dssp EES
T ss_pred EEC
Confidence 997
No 35
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.13 E-value=0.031 Score=38.93 Aligned_cols=74 Identities=9% Similarity=0.047 Sum_probs=60.9
Q ss_pred EEcCCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEee
Q psy6564 5 TAAEIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 5 ~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~p 84 (150)
..+.+.+.|++.+|+. +++.|.+..+.|.+++.... . + ..|.-.+.|-..|++++-+.++ .++.+.|++.
T Consensus 9 ~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~---~-~---~~y~~~l~L~~~I~~e~S~~~v-~~~kiei~L~ 78 (125)
T 1ejf_A 9 YDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS---D-N---FKHLNEIDLFHCIDPNDSKHKR-TDRSILCCLR 78 (125)
T ss_dssp EECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT---T-T---EEEEEEEEBSSCEEEEEEEEEE-CSSCEEEEEE
T ss_pred EeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC---C-C---ceEEEEEEccceeccccCEEEE-CCCEEEEEEE
Confidence 5678899999999995 79999999999999876411 1 1 2477788999999999988888 6788999999
Q ss_pred cccc
Q psy6564 85 KKAV 88 (150)
Q Consensus 85 k~~~ 88 (150)
|..+
T Consensus 79 K~~~ 82 (125)
T 1ejf_A 79 KGES 82 (125)
T ss_dssp ESST
T ss_pred ECCC
Confidence 9753
No 36
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=96.00 E-value=0.047 Score=35.42 Aligned_cols=69 Identities=7% Similarity=0.050 Sum_probs=52.8
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCeEEEEeeccc
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~pk~~ 129 (150)
+..=++.+| ++..+++.+.+ .++.|+|.+.... .....+.+ .-.++++++.....+. +|.|.|+++|..
T Consensus 13 ~V~v~i~~~-~v~~~~v~v~~-~~~~l~v~~~~~~----~~~y~~~~-~L~~~I~~~~s~~~~~-~~~l~i~L~K~~ 81 (92)
T 2xcm_C 13 EVVVTVFAK-GIPKQNVNIDF-GEQILSVVIEVPG----EDAYYLQP-RLFGKIIPDKCKYEVL-STKIEICLAKAD 81 (92)
T ss_dssp EEEEEEECC-SCCGGGEEEEE-CSSBEEEEECCTT----SCCEEECC-BBSSCBCGGGCEEEEC-SSCEEEEEEBSS
T ss_pred EEEEEEEEC-CCChHHeEEEE-ECCEEEEEEEcCC----CcEEEEee-EcCCccCchhEEEEEE-CCEEEEEEEcCC
Confidence 445567775 78899999999 7889999986431 23344555 3456799999999998 899999999975
No 37
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.94 E-value=0.058 Score=39.19 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=58.5
Q ss_pred EEEcCCeEEEEEEeC-CCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCE-EEE
Q psy6564 4 TTAAEIEGTVNLDVQ-QFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGV-LSI 81 (150)
Q Consensus 4 i~e~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGv-L~I 81 (150)
=..+.+.+.|.+.|| |.+.+||.|.+..+.|.|+.+ +. . .=...|...|++++-..++ .++. |.|
T Consensus 18 W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k--------g~--~--~l~g~L~~~I~~eeS~w~i-~~~k~v~I 84 (157)
T 2rh0_A 18 WYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG--------GR--E--ILKGKLFDSTIADEGTWTL-EDRKMVRI 84 (157)
T ss_dssp EEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET--------TE--E--EEEEEBSSCBCGGGCEEEE-ECCCEEEE
T ss_pred EEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC--------CE--E--EEeeccccccCccccEEEE-cCCcEEEE
Confidence 356788999999997 899999999999999999763 11 1 2346789999999988888 6765 999
Q ss_pred Eeecccc
Q psy6564 82 QAPKKAV 88 (150)
Q Consensus 82 ~~pk~~~ 88 (150)
.+.|..+
T Consensus 85 ~L~K~~~ 91 (157)
T 2rh0_A 85 VLTKTKR 91 (157)
T ss_dssp EEEBSSC
T ss_pred EEEEcCC
Confidence 9999864
No 38
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.01 Score=42.09 Aligned_cols=75 Identities=9% Similarity=0.139 Sum_probs=56.2
Q ss_pred CCeEEEEEEeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCE-EEEEeecc
Q psy6564 8 EIEGTVNLDVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGV-LSIQAPKK 86 (150)
Q Consensus 8 ~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGv-L~I~~pk~ 86 (150)
.+.+.|++.+|+. +++.|.+..+.|.+++..... .++.....|.-.+.|...|++++-+..+ .++. |.|++.|.
T Consensus 22 k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~--~g~~~~~~y~~~l~L~~~Idpe~S~~~v-~~~~~vei~L~K~ 96 (134)
T 2cg9_X 22 RNYVLITVSIADC--DAPELTIKPSYIELKAQSKPH--VGDENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFLKLYKK 96 (134)
T ss_dssp SSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEEE-CCC--CEEEEEEC
T ss_pred CCEEEEEEEecCC--CceEEEEECCEEEEEEecccc--cCCccCceEEEEEEChhhccccccEEEE-CCCEEEEEEEEEC
Confidence 3558899999997 499999999999998764320 0000013577889999999999999999 6777 99999997
Q ss_pred c
Q psy6564 87 A 87 (150)
Q Consensus 87 ~ 87 (150)
.
T Consensus 97 ~ 97 (134)
T 2cg9_X 97 D 97 (134)
T ss_dssp S
T ss_pred C
Confidence 6
No 39
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=94.33 E-value=0.11 Score=37.48 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=58.2
Q ss_pred EEcCCeEEEEEEeCCCCCCCeEEEEE-CCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEe
Q psy6564 5 TAAEIEGTVNLDVQQFKPEEIDVKVV-DKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQA 83 (150)
Q Consensus 5 ~e~~~~~~v~~dlpG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~ 83 (150)
+.+.+.+.|++.+++. +++.|.+. .+.|.+++. . . . + ..|.-.+.|-..|+++ -+..+ ....+.|++
T Consensus 10 ~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~--~-~-~---~~y~~~l~L~~~Idpe-S~~~v-~~~kIei~L 77 (150)
T 2kmw_A 10 AQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G--A-Q-G---ERFEFSLELYGKIMTE-YRKNV-GLRNIIFSI 77 (150)
T ss_dssp EECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T--T-T-T---EEEEEEEEBSSCEEEE-EEEEE-ESSSEEEEE
T ss_pred EeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c--C-C-C---ceEEEEeEhhhccccc-ceEEe-cCCEEEEEE
Confidence 5678899999999997 58999999 789999986 1 1 1 1 3577788999999999 77887 577789999
Q ss_pred ecccc
Q psy6564 84 PKKAV 88 (150)
Q Consensus 84 pk~~~ 88 (150)
.|..+
T Consensus 78 ~K~e~ 82 (150)
T 2kmw_A 78 QKEER 82 (150)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99763
No 40
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=87.71 E-value=3.1 Score=28.42 Aligned_cols=70 Identities=13% Similarity=0.223 Sum_probs=51.4
Q ss_pred EEEEEEECCCCC-CcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCe-EEEEeeccc
Q psy6564 53 EFTRRYKIPDSV-DANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGV-LSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~v-d~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~Gv-L~i~~pk~~ 129 (150)
+..=+|.||+++ +.+++.+.+ ...-|.+.+.-.. .....+.. .-+.+++++...-.+. +|. |.|++-|..
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i-~~~~l~v~~~~~~----~~~~~~~~-~L~~~I~~e~S~w~i~-~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVAL-SSSSIRVAMLEEN----GERVLMEG-KLTHKINTESSLWSLE-PGKCVLVNLSKVG 101 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEE-CSSEEEEEEECSS----SEEEEEEE-EBSSCBCTTTCEEEEC-TTSEEEEEECBSS
T ss_pred EEEEEEEcCCCCCchhheEEEE-EcCEEEEEEEccC----CCceEEcc-cccCcCCCcCCEEEEe-CCCEEEEEEEECC
Confidence 667889999998 999999999 7888999874211 11223333 3456688888877887 665 999999975
No 41
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.53 E-value=4.5 Score=27.68 Aligned_cols=70 Identities=10% Similarity=0.118 Sum_probs=53.0
Q ss_pred EEEEEEECCCCC---CcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCeEEEEeeccc
Q psy6564 53 EFTRRYKIPDSV---DANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~v---d~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~pk~~ 129 (150)
...=+|.|| ++ +.+++.+.| ....|.|.+.-.. .....+.+..-.+.++++...-.+. ++.+.|++-|..
T Consensus 31 ~V~i~I~l~-~~~~~~~~~v~V~~-~~~~l~v~~~~~~----~~~y~~~~~~L~~~I~~e~S~~~v~-~~kVei~L~K~~ 103 (127)
T 1x5m_A 31 FVKIYITLT-GVHQVPTENVQVHF-TERSFDLLVKNLN----GKSYSMIVNNLLKPISVEGSSKKVK-TDTVLILCRKKV 103 (127)
T ss_dssp EEEEEEECT-TTTTSCTTSEEEEE-CSSEEEEEECSCS----SSCEEEEEECBSSCCCTTTCEEEEE-TTEEEEEEECSS
T ss_pred EEEEEEEeC-CCCcCCccccEEEE-EcCEEEEEEEcCC----CCcEEEEhHHhcCccCcccCEEEEe-CCEEEEEEEECC
Confidence 456678887 55 889999999 6888999885322 2345667765677899998877776 788999999975
No 42
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=84.23 E-value=3.6 Score=28.42 Aligned_cols=65 Identities=15% Similarity=0.250 Sum_probs=47.2
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCeEEEEeecc
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAPKK 128 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~pk~ 128 (150)
+..=+|.||++++.+++.+.+ ...-|.|.+. . .. .+... -+++++++...-.+. +|.|.|++-|.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i-~~~~l~v~~~----g---~~-~~~~~-L~~~I~~e~S~w~i~-~~kv~i~L~K~ 79 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRM-VGKKICVKNQ----G---EI-VIDGE-LLHEVDVSSLWWVIN-GDVVDVNVTKK 79 (131)
T ss_dssp EEEEEEECC---CCSCEEEEE-ETTEEEEEET----T---EE-EEEEE-BSSCEEEEEEEEEEE-TTEEEEEEEES
T ss_pred EEEEEEECCCCCCccceEEEE-ECCEEEEEEC----C---Ee-eEccc-cccccccccCEEEEe-CCEEEEEEEEC
Confidence 567789999999999999999 6888999873 1 12 34433 456688888877887 66799999997
No 43
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=77.58 E-value=15 Score=26.08 Aligned_cols=66 Identities=18% Similarity=0.136 Sum_probs=50.6
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCe-EEEEeeccc
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGV-LSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~Gv-L~i~~pk~~ 129 (150)
+..=+|.||+++..+++.+.+ ...-|.|.+. . ...+... -..+++++...-.+. +|. |.|++-|..
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i-~~~~L~v~~k----g----~~~l~g~-L~~~I~~eeS~w~i~-~~k~v~I~L~K~~ 90 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGL-QSRHVALAVG----G----REILKGK-LFDSTIADEGTWTLE-DRKMVRIVLTKTK 90 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEE-CSSEEEEEET----T----EEEEEEE-BSSCBCGGGCEEEEE-CCCEEEEEEEBSS
T ss_pred EEEEEEECCCCCcccceEEEE-ecCEEEEEEC----C----EEEEeec-cccccCccccEEEEc-CCcEEEEEEEEcC
Confidence 567889999999999999999 7888999873 1 1233333 456688888887887 564 899999975
No 44
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=76.99 E-value=14 Score=24.92 Aligned_cols=67 Identities=13% Similarity=0.144 Sum_probs=49.4
Q ss_pred EEEEEEECCCC--CCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCC-eEEEEeeccc
Q psy6564 53 EFTRRYKIPDS--VDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDG-VLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~--vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~G-vL~i~~pk~~ 129 (150)
+..-+|.||.+ ++.+++.+.+ ...-|.|.+.-. ...+.. .-..+++++...-.+. +| .|.|++-|..
T Consensus 27 eV~v~V~lp~~~~~~~kdv~V~i-~~~~l~v~~kg~-------~~~~~g-~L~~~I~~deS~w~i~-~~~~i~i~L~K~~ 96 (121)
T 3qor_A 27 ELDLAVPFCVNFRLKGKDMVVDI-QRRHLRVGLKGQ-------PAIIDG-ELYNEVKVEESSWLIA-DGAVVTVHLEKIN 96 (121)
T ss_dssp EEEEEEECCCSSCCCGGGEEEEE-ETTEEEEEETTS-------CCSEEE-EBSSCBCGGGCEEEEE-TTTEEEEEEEBSS
T ss_pred eEEEEEECCCCCcccccceEEEE-EcCEEEEEEcCc-------ceEEec-cccccccccccEEEEc-CCCEEEEEEEECC
Confidence 67788999998 8999999999 677888876421 112222 2345688888777787 66 8999999875
No 45
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=73.67 E-value=5.3 Score=27.45 Aligned_cols=67 Identities=13% Similarity=0.158 Sum_probs=48.4
Q ss_pred EEEEEEECCCC--CCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCC-eEEEEeeccc
Q psy6564 53 EFTRRYKIPDS--VDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDG-VLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~--vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~G-vL~i~~pk~~ 129 (150)
+..=+|.||++ +..+++.+.+ ...-|.+.+.-. ...+.. .-..+++++...-.+. +| .|.|++-|..
T Consensus 18 ~V~i~I~lp~~~~~~~kdv~V~i-~~~~l~v~~kg~-------~~~~~~-~L~~~I~~e~s~w~i~-~~k~v~i~L~K~~ 87 (131)
T 1wfi_A 18 ELDLAVPFRVSFRLKGKDVVVDI-QRRHLRVGLKGQ-------PPVVDG-ELYNEVKVEESSWLIE-DGKVVTVHLEKIN 87 (131)
T ss_dssp EEEEEECCCCSSCCCTTSEEEEE-ETTEEEEEETTS-------CCSBCS-CBSSCBCSTTCEEEEE-TTTEEEEEEEBSS
T ss_pred EEEEEEECCCCCcccccceEEEE-eCCEEEEEECCc-------eEEEec-ccccccccccCEEEEc-CCCEEEEEEEECC
Confidence 55677999988 9999999999 788899987311 111222 2345688887777776 66 7999999975
No 46
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=69.18 E-value=24 Score=24.19 Aligned_cols=65 Identities=9% Similarity=0.154 Sum_probs=36.2
Q ss_pred EEEEECCCC-CCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccccccc-CCCCeEEEEeeccc
Q psy6564 55 TRRYKIPDS-VDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKL-SSDGVLSIQAPKKA 129 (150)
Q Consensus 55 ~r~~~LP~~-vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~-~~~GvL~i~~pk~~ 129 (150)
.-.+.+|.- +...++...+ .+-.+...++ +-.+++...+.-++-+...|+. +.+|.++|++||..
T Consensus 30 ~I~I~~p~ir~~a~~~ei~v-d~~~F~F~~~---------PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~ 96 (115)
T 3eud_A 30 FLKIFISNIRFSAVGLEIII-QENMIIFHLS---------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLN 96 (115)
T ss_dssp EEEEECCSCCCCSSSCEEEE-ETTEEEEEET---------TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESS
T ss_pred EEEEEcCceecccCccEEEE-eCCEEEEecC---------CeEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCc
Confidence 445666642 3455666666 4554444322 3444444444334444444444 35999999999975
No 47
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=65.20 E-value=13 Score=24.57 Aligned_cols=20 Identities=20% Similarity=0.567 Sum_probs=16.9
Q ss_pred CCCeEEEEECCEEEEEEEEe
Q psy6564 22 PEEIDVKVVDKYIVVHAKHE 41 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~ 41 (150)
|+.|+|+++++.++|+|.+-
T Consensus 20 P~gV~V~i~~~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCc
Confidence 68899999999999988653
No 48
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=61.81 E-value=37 Score=23.49 Aligned_cols=71 Identities=6% Similarity=0.041 Sum_probs=49.5
Q ss_pred EEEEECCCCCCcCCcEEEecCCCEEEEEeeccccc-------cC-CCceEEEeecCCCCCCccccccccCCCCeEEEEee
Q psy6564 55 TRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVE-------AG-AGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAP 126 (150)
Q Consensus 55 ~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~-------~~-~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~p 126 (150)
.=+|.++ ++..+++.+.| ....|++.+.-.... .. +....+.++ -...++++...-.+. ++.+.|++-
T Consensus 33 ~vtI~~k-~v~~~~v~V~f-~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~-L~~~I~pe~S~~~v~-~~kIeI~L~ 108 (134)
T 1wh0_A 33 VVHVYVK-EICRDTSRVLF-REQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVK-LRNLIEPEQCTFCFT-ASRIDICLR 108 (134)
T ss_dssp EEEEECC-SBCTTSCEEEE-CSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEE-BSSCEEEEEEEEEEC-SSEEEEEEE
T ss_pred EEEEEeC-CCCcccCEEEE-ECCEEEEEEEcCCCcccccccccCcceeEEEecc-ccccCCchhCEEEEe-CCEEEEEEE
Confidence 3446675 68889999999 788899998643211 00 114455555 556688888877777 688999999
Q ss_pred ccc
Q psy6564 127 KKA 129 (150)
Q Consensus 127 k~~ 129 (150)
|..
T Consensus 109 K~e 111 (134)
T 1wh0_A 109 KRQ 111 (134)
T ss_dssp ESS
T ss_pred ECC
Confidence 974
No 49
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=58.93 E-value=19 Score=26.32 Aligned_cols=46 Identities=20% Similarity=0.406 Sum_probs=33.0
Q ss_pred CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEeecc
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKK 86 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~ 86 (150)
|+.++|+++++.++|+|.+-. ..+. |++. ++..+ +||.|+++.+..
T Consensus 11 P~gV~V~i~~~~VtVkGpkG~-----------L~~~--~~~~-----v~i~~-~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKGE-----------LTRT--FHPD-----MTITV-EGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETTEE-----------EEEE--CCTT-----CEEEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCeE-----------EEEE--cCCC-----EEEEE-eCCEEEEEcCCC
Confidence 588999999999999986532 2333 3443 45677 799999886544
No 50
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=54.44 E-value=15 Score=25.77 Aligned_cols=63 Identities=10% Similarity=0.171 Sum_probs=35.8
Q ss_pred EEECCCCC-CcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccccccc-CCCCeEEEEeeccc
Q psy6564 57 RYKIPDSV-DANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKL-SSDGVLSIQAPKKA 129 (150)
Q Consensus 57 ~~~LP~~v-d~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~-~~~GvL~i~~pk~~ 129 (150)
.+.+|.-- ..+++...+ .+-.+....+ +..+.+...+.-++.+..+|++ +.+|.|+|++||..
T Consensus 18 ~Ik~P~~~~~~sdiei~v-~~~~F~F~~~---------PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~ 82 (134)
T 2k8q_A 18 KIFISNIRFSAVGLEIII-QENMIIFHLS---------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLN 82 (134)
T ss_dssp EEECCSSCCCSSSCCCEE-CSSSEEECSS---------SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESS
T ss_pred EEEcCccccCccccEEEE-eCCEEEEecC---------CeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCC
Confidence 44554322 255666666 4555555432 3344444443334666666666 35999999999964
No 51
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=54.23 E-value=23 Score=25.99 Aligned_cols=44 Identities=18% Similarity=0.420 Sum_probs=31.3
Q ss_pred CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEee
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~p 84 (150)
|++++|+++++.++|+|.+-. + .|. |++. ++..+ +++.|+|+..
T Consensus 12 P~gV~v~i~~~~v~VkGpkG~-------L----~~~--~~~~-----v~i~~-~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKGE-------L----EVP--VSPE-----MRVVV-EEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSCE-------E----EEE--CCTT-----SEEEE-ETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCcE-------E----EEE--eCCC-----EEEEE-ECCEEEEEEC
Confidence 689999999999999886532 2 233 3433 55667 7899888754
No 52
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=51.07 E-value=26 Score=24.66 Aligned_cols=40 Identities=18% Similarity=0.400 Sum_probs=25.5
Q ss_pred cEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccc
Q psy6564 69 ISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAI 111 (150)
Q Consensus 69 i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v 111 (150)
++..++.||+|+|++--... .....|.|....+..+.+.+
T Consensus 85 Vtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~~~~ls~~ei 124 (152)
T 3h0x_A 85 VTFALDANGILKVSATDKGT---GKSESITITNDKGRLTQEEI 124 (152)
T ss_dssp EEEEECTTSEEEEEEEETTT---CCEEEEEEECCTTCCCHHHH
T ss_pred EEEEEcCCCEEEEEEEEcCC---CcEeEEEEecCCCCCCHHHH
Confidence 44445789999999874432 35677888765444444443
No 53
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=50.67 E-value=39 Score=25.51 Aligned_cols=47 Identities=19% Similarity=0.334 Sum_probs=32.1
Q ss_pred CCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEeecc
Q psy6564 21 KPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKK 86 (150)
Q Consensus 21 ~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~ 86 (150)
=|+.|+|+++++.++|+|..-. ..+.| ++. ++..+ +||.|+++.+..
T Consensus 38 IP~gV~V~i~~~~VtVKGPkG~-----------L~~~~--~~~-----v~i~~-e~~~i~v~~~~~ 84 (212)
T 1nkw_E 38 VPSGVTVNAQDGVFKVKGPKGE-----------LTVPY--NTE-----LTVRQ-DGDQLLVERPSD 84 (212)
T ss_pred cCCCcEEEEeCCEEEEECCCEE-----------EEEEC--CCC-----eEEEE-ECCEEEEEcCCC
Confidence 3588999999999999987642 22333 443 44667 788888875544
No 54
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=50.02 E-value=33 Score=25.12 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEeecc
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKK 86 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~ 86 (150)
|+.++|+++++.++|+|.+-. ..+.|. ++ .++..+ ++|.|+++.+..
T Consensus 9 P~gV~v~i~~~~vtVkGpkG~-----------L~~~~~-~~-----~v~i~~-~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNGS-----------VTRRLW-YP-----DIDVSV-DGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETTEE-----------EEEECC-CT-----TCEEEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCeE-----------EEEEEE-CC-----eEEEEE-ECCEEEEEcCCC
Confidence 588999999999999986532 233331 33 355677 799998886554
No 55
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=49.99 E-value=30 Score=23.31 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=48.0
Q ss_pred EEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccccccccCCCCeEEEEeeccc
Q psy6564 53 EFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAISSKLSSDGVLSIQAPKKA 129 (150)
Q Consensus 53 ~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v~~~~~~~GvL~i~~pk~~ 129 (150)
...=+|.||. .+++.+.+ ....|.+.+.-.. . .....+.+. -.+.++++.....+. ++.+.|++-|..
T Consensus 14 ~V~ltI~~~~---~~~~~V~~-~~~~l~~~~~~~~-~--~~~y~~~l~-L~~~I~~e~S~~~v~-~~kiei~L~K~~ 81 (125)
T 1ejf_A 14 YVFIEFCVED---SKDVNVNF-EKSKLTFSCLGGS-D--NFKHLNEID-LFHCIDPNDSKHKRT-DRSILCCLRKGE 81 (125)
T ss_dssp EEEEEECCTT---EEEEEEEE-ETTEEEEEEEETT-T--TEEEEEEEE-BSSCEEEEEEEEEEC-SSCEEEEEEESS
T ss_pred EEEEEEEecC---CCceEEEE-ECCEEEEEEEeCC-C--CceEEEEEE-ccceeccccCEEEEC-CCEEEEEEEECC
Confidence 3455777876 36888999 6888888875311 1 123456663 567789998888887 678999999975
No 56
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.63 E-value=16 Score=27.01 Aligned_cols=28 Identities=18% Similarity=0.414 Sum_probs=20.1
Q ss_pred EEEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 54 FTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 54 f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
+.+.+.+|++|+ +++ ++..+++++|+-.
T Consensus 7 ~~~~I~IP~gV~-----v~i-~~~~V~VkGpkG~ 34 (184)
T 3j21_F 7 IREEVEIPEGVE-----VTV-EGYKVKVKGPKGE 34 (184)
T ss_dssp CEEEEECCSSCE-----EEE-SSSEEEEECSSCE
T ss_pred eeEEEeCCCCcE-----EEE-eCCEEEEEcCCeE
Confidence 467889998876 666 6677777777653
No 57
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=47.51 E-value=21 Score=25.21 Aligned_cols=41 Identities=15% Similarity=0.357 Sum_probs=24.1
Q ss_pred CcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccc
Q psy6564 68 AISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAI 111 (150)
Q Consensus 68 ~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v 111 (150)
+++..++.||+|+|++--.. ......|.|....+..+.+.+
T Consensus 84 eVtf~iD~nGiL~Vsa~d~~---tg~~~~i~I~~~~~~Ls~~ei 124 (152)
T 3dob_A 84 EVTFNIDANGILNVSAEDKS---TGKSNRITIQNEKGRLTQSDI 124 (152)
T ss_dssp EEEEEECTTCCEEEEEEETT---TCCEEEEEECCC----CHHHH
T ss_pred EEEEEeCCCCeEEEEEEEcC---CCCEEEEEEEcCCCCCCHHHH
Confidence 34445578999999987433 235677888765444444433
No 58
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=46.96 E-value=39 Score=23.17 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=20.2
Q ss_pred cEEEecCCCEEEEEeeccccccCCCceEEEeecC
Q psy6564 69 ISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQT 102 (150)
Q Consensus 69 i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~ 102 (150)
++.+++.||+|.|++--... .....|.|...
T Consensus 102 Vtf~iD~nGiL~V~a~d~~t---g~~~~i~i~~~ 132 (135)
T 1q5l_A 102 VTFDIDADGILHVSAKDKNS---GKEQKITIKAS 132 (135)
T ss_dssp EEEEECTTSEEEEEEEETTT---CCEEEEEEECS
T ss_pred EEEEECCCCEEEEEEEECCC---CCEEEEEEecC
Confidence 44445789999999864332 34667777643
No 59
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=46.77 E-value=27 Score=24.27 Aligned_cols=40 Identities=13% Similarity=0.385 Sum_probs=24.1
Q ss_pred cEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccc
Q psy6564 69 ISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAI 111 (150)
Q Consensus 69 i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v 111 (150)
++..++.||+|+|++--.. ......|.|....+..+.+.+
T Consensus 85 V~f~id~nGiL~V~a~d~~---tg~~~~i~i~~~~~~ls~eei 124 (152)
T 2op6_A 85 VTFEIDVNGILHVSAEDKG---TGNKNKLTITNDHNRLSPEDI 124 (152)
T ss_dssp EEEEECTTSCEEEEEEETT---TCCEEEEEECSSSSCCCHHHH
T ss_pred EEEEECCCcEEEEEEEEec---CCcEEEEEeeccccCCCHHHH
Confidence 4444578999999986332 134667888755333444333
No 60
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=44.19 E-value=37 Score=23.84 Aligned_cols=40 Identities=13% Similarity=0.392 Sum_probs=25.5
Q ss_pred CcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCcccc
Q psy6564 68 AISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANAI 111 (150)
Q Consensus 68 ~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~v 111 (150)
+++..++.||+|+|++--.. ......|.|... +..+.+.+
T Consensus 84 eVtf~iD~nGiL~Vsa~d~~---tg~~~~i~I~~~-~~Ls~~ei 123 (151)
T 3dqg_A 84 EVTFDIDANGIVNVSARDRG---TGKEQQIVIQSS-GGLSKDQI 123 (151)
T ss_dssp EEEEEECTTSEEEEEEEETT---TCCEEEEEEECS-SSSCHHHH
T ss_pred EEEEEeccCcEEEEEEEEcc---CCCEeEEEEecC-CCCCHHHH
Confidence 34445578999999987443 235677888765 44444443
No 61
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.97 E-value=31 Score=25.36 Aligned_cols=45 Identities=24% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEee
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~p 84 (150)
|++++|+++++.++|+|.+-. + .|.|.- +. ++.++ .++.|+++..
T Consensus 14 P~gV~v~i~~~~V~VkGpkG~-------L----~~~~~~-~~-----v~i~~-~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKGE-------L----EREFFW-PG-----IQIFT-EDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSSCE-------E----EEECCC-TT-----CEEEE-ETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCCeE-------E----EEEecC-Cc-----EEEEE-eCCEEEEEEC
Confidence 589999999999999886532 2 333321 22 45667 7888888754
No 62
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=40.64 E-value=25 Score=26.10 Aligned_cols=28 Identities=11% Similarity=0.439 Sum_probs=19.7
Q ss_pred EEEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 54 FTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 54 f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
-.+.+.+|++|+ +++ ++..++|++|+-.
T Consensus 6 ~~~~I~IP~gV~-----v~i-~~~~V~VkGPkG~ 33 (191)
T 3u5e_H 6 TEQQIEVPEGVT-----VSI-KSRIVKVVGPRGT 33 (191)
T ss_dssp EEEEEECCTTCE-----EEE-ETTEEEEEETTEE
T ss_pred ecccEECCCCcE-----EEE-eCCEEEEEcCCeE
Confidence 356888998876 566 5677777777653
No 63
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=38.82 E-value=94 Score=22.88 Aligned_cols=46 Identities=11% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEE-ecCCCEEEEEeec
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSK-LSSDGVLSIQAPK 85 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~-~~~dGvL~I~~pk 85 (150)
|++++|+++++.++|+|.+-. + .|. |+. . .+... . ++|.|.|+.+-
T Consensus 13 P~gV~v~i~~~~V~VkGPkG~-------L----~~~--~~~-~---~v~i~~~-~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPRGT-------L----TKN--LKH-I---DVTFTKV-NNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETTEE-------E----EEE--CTT-T---CCEEEEE-ETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCeE-------E----EEE--ccC-C---cEEEEEe-cCCeEEEEECC
Confidence 689999999999999987642 2 232 332 1 34455 4 68999988654
No 64
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=38.70 E-value=28 Score=25.53 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=20.3
Q ss_pred EEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 55 TRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 55 ~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
.+.+.+|++|+ +++ ++..+++++|+-.
T Consensus 3 ~~pI~IP~gV~-----v~i-~~~~vtVkGpkG~ 29 (178)
T 1vq8_E 3 RVELEIPEDVD-----AEQ-DHLDITVEGDNGS 29 (178)
T ss_dssp EEEEECCTTCE-----EEE-ETTEEEEEETTEE
T ss_pred cccEEcCCCCE-----EEE-eCCEEEEECCCeE
Confidence 46788888775 667 6788888888764
No 65
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=37.35 E-value=27 Score=25.86 Aligned_cols=27 Identities=19% Similarity=0.539 Sum_probs=18.5
Q ss_pred EEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 55 TRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 55 ~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
.+.+.+|++|+ +++ ++..++|++|+-.
T Consensus 7 ~~~I~IP~gV~-----v~i-~~~~V~VkGPkG~ 33 (190)
T 3iz5_F 7 SETMEIPEGVT-----VQV-AAKVVTVEGPRGK 33 (190)
T ss_dssp CEEEECCTTCE-----EEE-ETTEEEEEETTEE
T ss_pred CccEECCCCCE-----EEE-eCCEEEEECCCce
Confidence 35788888876 556 5667777777653
No 66
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=37.00 E-value=18 Score=22.64 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=21.2
Q ss_pred EeCCCCCCCeEEEEECCEEEEEEEE
Q psy6564 16 DVQQFKPEEIDVKVVDKYIVVHAKH 40 (150)
Q Consensus 16 dlpG~~~edI~V~v~~~~L~I~g~~ 40 (150)
++--|+.+.|.+....+.|.|+|+.
T Consensus 14 ~V~sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 14 KVQSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEEEECSSEEEEEETTEEEEEEEEC
T ss_pred CEEEECCCEEEEEeCceEEEEEcCC
Confidence 3445899999999999999999974
No 67
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=36.82 E-value=21 Score=23.86 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=14.7
Q ss_pred CCcEEEecCCCEEEEEee
Q psy6564 67 NAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 67 ~~i~a~~~~dGvL~I~~p 84 (150)
.++.+.+ .+|||+|+++
T Consensus 28 ~d~D~e~-~~gVLti~f~ 44 (106)
T 1ew4_A 28 SDIDCEI-NGGVLTITFE 44 (106)
T ss_dssp SCCEEEE-ETTEEEEECT
T ss_pred CCEeeec-cCCEEEEEEC
Confidence 4588999 7999999986
No 68
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=36.77 E-value=43 Score=24.35 Aligned_cols=39 Identities=13% Similarity=0.375 Sum_probs=24.5
Q ss_pred CcEEEecCCCEEEEEeeccccccCCCceEEEeecCCCCCCccc
Q psy6564 68 AISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQTPDSVDANA 110 (150)
Q Consensus 68 ~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~~~~vd~~~ 110 (150)
+++..++.||+|.|++--... .....|.|... +..+.+.
T Consensus 104 eVtf~iD~nGiL~VsA~d~~t---g~~~~i~I~~~-~~Ls~ee 142 (182)
T 3n8e_A 104 EVTFDIDANGIVHVSAKDKGT---GREQQIVIQSS-GGLSKDD 142 (182)
T ss_dssp EEEEEECTTCCEEEEEEETTT---CCEEEEEESCC-CCCCHHH
T ss_pred EEEEEEecCCEEEEEEEEcCC---CCEeeEEEecC-ccCCHHH
Confidence 344445789999999874432 34667888755 3344443
No 69
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=35.99 E-value=23 Score=20.78 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=18.1
Q ss_pred CCCeEEEEECCEEEEEEEEee
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEE 42 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~ 42 (150)
-.||.|..+++.+++.|+.+-
T Consensus 32 yndinvtwdgdtvtvegqleg 52 (62)
T 2gjh_A 32 YNDINVTWDGDTVTVEGQLEG 52 (62)
T ss_dssp CCSCEEEECSSCEEEEEECCC
T ss_pred cccceeEEcCCEEEEEeEEcC
Confidence 369999999999999998653
No 70
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=33.13 E-value=25 Score=25.97 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=19.1
Q ss_pred EEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 55 TRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 55 ~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
.+.+.+|++|+ +++ ++..++|++|+-.
T Consensus 7 ~~~I~IP~gV~-----v~i-~~~~V~VkGPkG~ 33 (188)
T 4a17_E 7 EVNVPIPDKVT-----ITA-KQRVVEVKGPLGT 33 (188)
T ss_dssp EEECCCCTTCE-----EEE-ETTEEEEEETTEE
T ss_pred cccEECCCCcE-----EEE-eCCEEEEEcCCeE
Confidence 56778888776 666 6777777777654
No 71
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=32.90 E-value=39 Score=21.71 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=17.2
Q ss_pred CCCeEEEEECCEEEEEEEEee
Q psy6564 22 PEEIDVKVVDKYIVVHAKHEE 42 (150)
Q Consensus 22 ~edI~V~v~~~~L~I~g~~~~ 42 (150)
-.||.|.++++.+++.|+.+-
T Consensus 76 yndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 76 YNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp CCEEEEEEETTEEEEEEEC--
T ss_pred CcceeEEEcCCeEEEEeEEcC
Confidence 468999999999999998653
No 72
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=32.69 E-value=85 Score=23.11 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=33.6
Q ss_pred EeCCCCCCCeEEEEECCEEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCE---EEEEeecc
Q psy6564 16 DVQQFKPEEIDVKVVDKYIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGV---LSIQAPKK 86 (150)
Q Consensus 16 dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGv---L~I~~pk~ 86 (150)
..|=-=|+.++|+++++.++|+|.+-. ..+ .||+- .++... .+|. |.++.+..
T Consensus 7 k~pI~IP~gV~V~i~~~~VtVkGpkG~-----------L~~--~~~~~----~v~i~~-~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 7 NQTVDIPENVDITLKGRTVIVKGPRGT-----------LRR--DFNHI----NVELSL-LGKKKKRLRVDKWWG 62 (192)
T ss_dssp ---CCCCTTCEEEEETTEEEEEETTEE-----------EEE--ECCSS----SCEEEE-ETTTTCEEEEECSCC
T ss_pred cCcEEcCCCCEEEEeCCEEEEECCCeE-----------EEE--EeCCC----CEEEEE-ecCceeEEEEEcCCC
Confidence 334445789999999999999986542 222 33331 355667 6787 88875544
No 73
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=32.40 E-value=41 Score=23.21 Aligned_cols=15 Identities=33% Similarity=0.674 Sum_probs=13.7
Q ss_pred cEEEecCCCEEEEEee
Q psy6564 69 ISSKLSSDGVLSIQAP 84 (150)
Q Consensus 69 i~a~~~~dGvL~I~~p 84 (150)
+.+.+ .+|||+|+++
T Consensus 49 ~Dve~-~~gVLti~f~ 63 (123)
T 3oeq_A 49 PDVEL-SHGVMTLEIP 63 (123)
T ss_dssp CEEEE-CSSEEEEECT
T ss_pred eEEEc-cCCEEEEEEC
Confidence 78999 7999999997
No 74
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=31.64 E-value=80 Score=23.97 Aligned_cols=50 Identities=14% Similarity=0.160 Sum_probs=32.1
Q ss_pred EEEEEEEEeeecCCCceEEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEeecc
Q psy6564 33 YIVVHAKHEERSDQHGFISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKK 86 (150)
Q Consensus 33 ~L~I~g~~~~~~~~~~~~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~ 86 (150)
.++|+|.-++.........|.|.|+|.|-+.-+. . ..+ -|.+|+|+-+-.
T Consensus 123 ~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~-~--~~I-~ND~l~l~~~s~ 172 (250)
T 1jkg_B 123 CFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNS-G--LCI-VNDELFVRNASS 172 (250)
T ss_dssp EEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTS-S--EEE-EEEEEEEEECCH
T ss_pred EEEEEEEEEECCCCCCCCceeeEEEEEEEECCCC-c--EEE-EeeEEEEECCCh
Confidence 3678887765331112235899999999654332 2 556 688999987654
No 75
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=27.26 E-value=35 Score=23.64 Aligned_cols=17 Identities=18% Similarity=0.387 Sum_probs=14.9
Q ss_pred CCcEEEecCCCEEEEEee
Q psy6564 67 NAISSKLSSDGVLSIQAP 84 (150)
Q Consensus 67 ~~i~a~~~~dGvL~I~~p 84 (150)
.++.+.+ .+|||+|+++
T Consensus 40 ~d~D~e~-~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSF-GSGVLTVKLG 56 (129)
T ss_dssp TTCEEEE-ETTEEEEECC
T ss_pred cceeeec-CCCEEEEEEc
Confidence 5688999 7999999986
No 76
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=26.24 E-value=80 Score=19.56 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=20.4
Q ss_pred CCcEEEecCCCEEEEEeeccccccCCCceEEEeec
Q psy6564 67 NAISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQ 101 (150)
Q Consensus 67 ~~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~ 101 (150)
..|.|.| +||+|.---|-.-++ ...-.|.|..
T Consensus 3 k~IeAiY-EnGVfkPLe~l~L~E--G~kV~I~I~~ 34 (69)
T 2nwt_A 3 KIIEAVY-ENGVFKPLQKVDLKE--GERVKIKLEL 34 (69)
T ss_dssp CCEEEEE-ETTEEEESSCCCCCT--TEEEEEECCC
T ss_pred ceEEEEE-ECCEEeECCcCCCCC--CCEEEEEEEe
Confidence 4589999 999998655544333 2344555653
No 77
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=25.90 E-value=1.7e+02 Score=20.28 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=24.9
Q ss_pred CCeEEEEEEeCCCCCC-----CeEEEEE---CCEEEEEEEE
Q psy6564 8 EIEGTVNLDVQQFKPE-----EIDVKVV---DKYIVVHAKH 40 (150)
Q Consensus 8 ~~~~~v~~dlpG~~~e-----dI~V~v~---~~~L~I~g~~ 40 (150)
++.++-.+.|.|+.+- .|.|.+. ++.|.|++..
T Consensus 61 dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d 101 (152)
T 3h0x_A 61 DNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATD 101 (152)
T ss_dssp GSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEE
T ss_pred cCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEE
Confidence 4567778999888752 4777766 7899999874
No 78
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=25.14 E-value=1.3e+02 Score=20.11 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=26.7
Q ss_pred EEEcCCeEEEEEEe-CCCCCCCeEEEEECCEEEEEEEE
Q psy6564 4 TTAAEIEGTVNLDV-QQFKPEEIDVKVVDKYIVVHAKH 40 (150)
Q Consensus 4 i~e~~~~~~v~~dl-pG~~~edI~V~v~~~~L~I~g~~ 40 (150)
+...++.+.+.+.+ ||-+.+.| ..+.++.|.|.-..
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~A 44 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITA 44 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEec
Confidence 56778888888888 88888877 45677777776443
No 79
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=25.13 E-value=98 Score=22.95 Aligned_cols=32 Identities=22% Similarity=0.452 Sum_probs=21.7
Q ss_pred CcEEEecCCCEEEEEeeccccccCCCceEEEeecC
Q psy6564 68 AISSKLSSDGVLSIQAPKKAVEAGAGERAIPVVQT 102 (150)
Q Consensus 68 ~i~a~~~~dGvL~I~~pk~~~~~~~~~r~I~I~~~ 102 (150)
.|+..++.||+|+|++--... .....|.|...
T Consensus 85 eVtf~iD~nGiL~V~a~d~~t---g~~~~i~I~~~ 116 (219)
T 4e81_A 85 EVTFDIDADGILHVSAKDKNS---GKEQKITIKAS 116 (219)
T ss_dssp EEEEEECTTCCEEEEEEETTT---CCEEEEEECTT
T ss_pred EEEEEeCCCCCEeeeeecccc---CccceEeeecc
Confidence 344445789999999875432 35677888654
No 80
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=24.33 E-value=1.4e+02 Score=22.43 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=23.7
Q ss_pred EEEEEEEEEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 50 ISREFTRRYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 50 ~~r~f~r~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
..+.|.|+|.|=+. + . ...+ .|.+|+|+..-..
T Consensus 174 ~~rsF~RTFvL~P~-~-~--~~~I-~nD~l~ir~~s~~ 206 (221)
T 1of5_A 174 SKKSFDRTWVIVPM-N-N--SVII-ASDLLTVRAYSTG 206 (221)
T ss_dssp EEEEEEEEEEEEEE-T-T--EEEE-EEEEEEEEECCCC
T ss_pred CccceEEEEEEEec-C-C--eEEE-EeeEEEeecCCCc
Confidence 56799999999665 2 2 2556 6889999866543
No 81
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=23.44 E-value=44 Score=22.88 Aligned_cols=69 Identities=4% Similarity=0.122 Sum_probs=43.1
Q ss_pred eCCCCCCCeEEEEECCEEEEEEEEeeecC------------CCceEEEEEEEEEEC-----CCCC-----------CcCC
Q psy6564 17 VQQFKPEEIDVKVVDKYIVVHAKHEERSD------------QHGFISREFTRRYKI-----PDSV-----------DANA 68 (150)
Q Consensus 17 lpG~~~edI~V~v~~~~L~I~g~~~~~~~------------~~~~~~r~f~r~~~L-----P~~v-----------d~~~ 68 (150)
.|..++-.|.|.++++.++++|.-..... +... .+.-.+.+ |++. ....
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~~~~k~aa~~a~~~v~Gv~~---~V~d~i~V~~~~~p~~~~a~~~aL~~~~~l~~ 78 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPDEAAKAALMTALNGLLAPGV---NVIDQIHVDPVVRSLDFSSAEPVFTASVPIPD 78 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESCHHHHHHHHHHHHTTCCTTC---EEEECCEECTTCCCCCGGGCHHHHHHHTTCTT
T ss_pred CCcccceeEEEEEECCEEEEEEECCCHHHHHHHHHHHHHhcCCCc---ceEEeEEEcCCCCCccHHHHHHHHHhcCcCCc
Confidence 46778888999999999999998653211 1110 12222222 2211 1246
Q ss_pred cEEEecCCCEEEEEeeccccc
Q psy6564 69 ISSKLSSDGVLSIQAPKKAVE 89 (150)
Q Consensus 69 i~a~~~~dGvL~I~~pk~~~~ 89 (150)
++.++ ++|.++|++-.....
T Consensus 79 i~V~V-~~g~VtLsG~v~s~~ 98 (132)
T 2kgs_A 79 FGLKV-ERDTVTLTGTAPSSE 98 (132)
T ss_dssp CEEEE-EETEEEEECEESSHH
T ss_pred eEEEE-ECCEEEEEEEECCHH
Confidence 78888 799999988776544
No 82
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=21.84 E-value=37 Score=24.72 Aligned_cols=25 Identities=24% Similarity=0.441 Sum_probs=16.8
Q ss_pred EEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 57 RYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 57 ~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
.+.+|++|+ +++ ++..++|++|+-.
T Consensus 7 pI~IP~gV~-----v~i-~~~~V~VkGpkG~ 31 (176)
T 3r8s_G 7 PVVVPAGVD-----VKI-NGQVITIKGKNGE 31 (176)
T ss_dssp CEECCTTCC-----CEE-SSSEEECCBTTBC
T ss_pred ceeCCCCcE-----EEE-eCCEEEEEcCCEE
Confidence 467787776 556 5677777777654
No 83
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=21.38 E-value=1.1e+02 Score=23.58 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=26.4
Q ss_pred CCCCCeEEEEECCEEEEEEEEeeec---CCCceEEEEEEEEEECCCC
Q psy6564 20 FKPEEIDVKVVDKYIVVHAKHEERS---DQHGFISREFTRRYKIPDS 63 (150)
Q Consensus 20 ~~~edI~V~v~~~~L~I~g~~~~~~---~~~~~~~r~f~r~~~LP~~ 63 (150)
+.++++.| +++.|.|++.+.... ....+.+-.|+-+++||.+
T Consensus 30 w~~~Nv~v--~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 30 WGPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp ECGGGEEE--ETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCCEEE--ECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 45677766 788899987643110 0111333378999999976
No 84
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.92 E-value=41 Score=25.55 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=17.8
Q ss_pred EEECCCCCCcCCcEEEecCCCEEEEEeeccc
Q psy6564 57 RYKIPDSVDANAISSKLSSDGVLSIQAPKKA 87 (150)
Q Consensus 57 ~~~LP~~vd~~~i~a~~~~dGvL~I~~pk~~ 87 (150)
.+.+|++|+ +++ +++.++|++|+-.
T Consensus 50 pI~IP~gV~-----V~i-~~~~VtVKGPkG~ 74 (223)
T 3bbo_I 50 PIAVPSNVT-----IAL-EGQDLKVKGPLGE 74 (223)
T ss_dssp CCCCSTTSC-----EEE-SSSEEEECCSSCC
T ss_pred ceecCCCCE-----EEE-eCCEEEEECCCeE
Confidence 467777765 667 6778888887754
No 85
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=20.42 E-value=81 Score=23.16 Aligned_cols=22 Identities=9% Similarity=0.232 Sum_probs=18.7
Q ss_pred CCCCCeEEEEECCEEEEEEEEe
Q psy6564 20 FKPEEIDVKVVDKYIVVHAKHE 41 (150)
Q Consensus 20 ~~~edI~V~v~~~~L~I~g~~~ 41 (150)
-=|++++|+++++.++|+|.+-
T Consensus 11 ~IP~gV~v~i~~~~V~VkGPkG 32 (188)
T 4a17_E 11 PIPDKVTITAKQRVVEVKGPLG 32 (188)
T ss_dssp CCCTTCEEEEETTEEEEEETTE
T ss_pred ECCCCcEEEEeCCEEEEEcCCe
Confidence 3479999999999999998653
Done!