Query psy6565
Match_columns 185
No_of_seqs 122 out of 1145
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 21:23:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 100.0 1.9E-48 6.4E-53 348.3 21.5 174 2-175 348-529 (529)
2 3iyg_B T-complex protein 1 sub 100.0 5.6E-48 1.9E-52 344.1 22.4 175 2-176 339-513 (513)
3 3iyg_Z T-complex protein 1 sub 100.0 7.5E-48 2.6E-52 343.5 20.8 173 2-174 345-517 (517)
4 3iyg_H T-complex protein 1 sub 100.0 1.6E-47 5.4E-52 341.3 21.9 173 2-174 342-514 (515)
5 3iyg_G T-complex protein 1 sub 100.0 1.6E-47 5.6E-52 341.2 21.3 173 2-174 341-514 (515)
6 3aq1_B Thermosome subunit; gro 100.0 1.4E-47 4.8E-52 340.6 20.7 178 2-179 304-481 (500)
7 3ruv_A Chaperonin, CPN; double 100.0 2.1E-47 7.1E-52 342.4 19.6 177 2-178 346-523 (543)
8 3iyg_D T-complex protein 1 sub 100.0 3.6E-47 1.2E-51 339.2 20.5 172 2-173 344-517 (518)
9 3p9d_A T-complex protein 1 sub 100.0 1.6E-47 5.3E-52 344.1 17.2 179 2-180 364-554 (559)
10 1a6d_B Thermosome (beta subuni 100.0 3.4E-47 1.2E-51 341.0 17.8 177 2-178 351-527 (543)
11 3ko1_A Chaperonin; 9-fold symm 100.0 1.2E-47 4E-52 344.4 14.2 177 2-178 360-537 (553)
12 3iyg_Q T-complex protein 1 sub 100.0 2E-46 6.9E-51 334.0 21.5 172 2-173 337-511 (512)
13 3iyg_E T-complex protein 1 sub 100.0 2E-46 6.7E-51 334.3 21.2 172 2-173 340-514 (515)
14 3p9d_G T-complex protein 1 sub 100.0 1.5E-47 5.1E-52 343.7 13.6 178 2-179 355-532 (550)
15 3p9d_B T-complex protein 1 sub 100.0 3.5E-48 1.2E-52 346.4 9.4 179 3-181 347-525 (527)
16 1q3q_A Thermosome alpha subuni 100.0 1.1E-46 3.6E-51 338.1 17.4 177 2-178 353-529 (548)
17 1a6d_A Thermosome (alpha subun 100.0 2.4E-46 8.2E-51 335.6 17.9 176 2-177 350-525 (545)
18 3p9d_F T-complex protein 1 sub 100.0 5.8E-47 2E-51 339.8 13.3 174 3-176 358-539 (546)
19 3p9d_E T-complex protein 1 sub 100.0 2.1E-46 7.3E-51 336.9 16.6 174 2-175 383-559 (562)
20 3p9d_C T-complex protein 1 sub 100.0 4.3E-46 1.5E-50 336.0 15.2 174 2-175 358-587 (590)
21 3p9d_D T-complex protein 1 sub 100.0 1E-46 3.4E-51 337.0 9.6 172 2-173 353-527 (528)
22 3p9d_H T-complex protein 1 sub 100.0 3.6E-47 1.2E-51 342.3 3.0 177 2-178 361-552 (568)
23 1we3_A CPN60(groel); chaperoni 100.0 1.3E-43 4.4E-48 317.6 18.1 173 3-178 322-529 (543)
24 3rtk_A 60 kDa chaperonin 2; he 100.0 3.8E-43 1.3E-47 314.2 14.2 171 2-179 321-526 (546)
25 1iok_A Chaperonin 60; chaperon 100.0 3.3E-43 1.1E-47 314.9 13.0 171 3-178 324-529 (545)
26 1kp8_A Groel protein; chaperon 100.0 2.3E-42 7.8E-47 309.5 16.6 170 3-178 323-527 (547)
27 1wy1_A Hypothetical protein PH 51.5 31 0.001 25.8 5.5 39 29-70 80-120 (172)
28 2wh0_Q Pkcev3, protein kinase 49.0 13 0.00044 19.2 2.1 19 27-45 9-27 (31)
29 2ah6_A BH1595, unknown conserv 48.5 88 0.003 24.0 7.9 40 29-70 99-140 (208)
30 2nt8_A Cobalamin adenosyltrans 42.7 1.1E+02 0.0038 23.7 7.7 38 29-70 123-164 (223)
31 2zhy_A ATP:COB(I)alamin adenos 42.4 88 0.003 23.5 6.9 8 55-62 109-116 (183)
32 1nog_A Conserved hypothetical 40.9 1.1E+02 0.0038 22.8 7.8 40 29-70 79-120 (177)
33 1wvt_A Hypothetical protein ST 40.4 96 0.0033 23.0 6.8 16 55-70 100-117 (172)
34 1woz_A 177AA long conserved hy 38.9 1.2E+02 0.0041 22.6 8.2 40 29-70 78-119 (177)
35 1rty_A YVQK protein; all alpha 38.4 1.3E+02 0.0043 22.8 7.4 40 29-70 86-127 (193)
36 3ci3_A Cobalamin adenosyltrans 36.6 1.3E+02 0.0046 22.7 7.2 38 29-70 94-135 (194)
37 3ke4_A Hypothetical cytosolic 35.0 1.3E+02 0.0043 23.3 6.8 8 55-62 129-136 (213)
38 3sl9_C B-cell CLL/lymphoma 9 p 33.2 56 0.0019 19.1 3.4 34 26-59 8-41 (55)
39 2idx_A COB(I)yrinic acid A,C-d 29.7 1.2E+02 0.004 23.1 5.8 69 29-101 92-174 (196)
40 1iqv_A Ribosomal protein S7; R 29.7 63 0.0022 25.1 4.3 45 69-117 87-131 (218)
41 2g2d_A ATP:cobalamin adenosylt 24.3 1.1E+02 0.0036 23.2 4.7 30 29-62 93-124 (193)
42 3a9l_A Poly-gamma-glutamate hy 22.3 90 0.0031 24.2 3.9 29 6-34 96-124 (216)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-48 Score=348.27 Aligned_cols=174 Identities=40% Similarity=0.587 Sum_probs=167.5
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
++||+++|++|+||+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+++++
T Consensus 348 ~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~ 427 (529)
T 3iyg_A 348 ERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSR 427 (529)
T ss_pred EEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCCh
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCC--------CceeEeCCCCcccccccCCccccHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGK--------STAGLDMDQGKVGDMSQLGITESYVVKRQV 153 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~--------~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~ 153 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|+|+.+|++.||.+.|||||+.+|+++
T Consensus 428 eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~a 507 (529)
T 3iyg_A 428 EQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKS 507 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHH
Confidence 999999999999999999999999999999999999997654 579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcHHHHHhcCC
Q psy6565 154 LTSASEAAEMILRVDNIIKAAP 175 (185)
Q Consensus 154 l~~a~~~a~~iL~iD~iI~~~~ 175 (185)
|++|+|+|++|||||++|+..|
T Consensus 508 l~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 508 LKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred HHHHHHHHHHHHhHHhhhcCCC
Confidence 9999999999999999998743
No 2
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.6e-48 Score=344.10 Aligned_cols=175 Identities=77% Similarity=1.154 Sum_probs=169.6
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
++||+++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 339 ~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 418 (513)
T 3iyg_B 339 VMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGK 418 (513)
T ss_pred EEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 419 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a 498 (513)
T 3iyg_B 419 EAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAA 498 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887778999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCC
Q psy6565 162 EMILRVDNIIKAAPR 176 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~ 176 (185)
++||+||++|...|+
T Consensus 499 ~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 499 EVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHhcCCC
Confidence 999999999998763
No 3
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.5e-48 Score=343.50 Aligned_cols=173 Identities=26% Similarity=0.468 Sum_probs=167.7
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
++||+++|+||++|++++.|||+|||+|+++++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 345 ~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 424 (517)
T 3iyg_Z 345 YTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGR 424 (517)
T ss_pred EEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHH
Confidence 47899999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.+|++|++|||+|+.+++.+|++.|..++.++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 425 eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 504 (517)
T 3iyg_Z 425 AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIA 504 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcC
Q psy6565 162 EMILRVDNIIKAA 174 (185)
Q Consensus 162 ~~iL~iD~iI~~~ 174 (185)
++|||||++|..+
T Consensus 505 ~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 505 TNILLVDEIMRAG 517 (517)
T ss_pred HHHHHHHHHhhCC
Confidence 9999999999863
No 4
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-47 Score=341.28 Aligned_cols=173 Identities=35% Similarity=0.623 Sum_probs=167.8
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.++|+++|++|++|+++++|||+|||+|+++++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 342 ~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 421 (515)
T 3iyg_H 342 TQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGK 421 (515)
T ss_pred EEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|..++.++|+|..+|++.||.++|||||+.+|+++|++|+++|
T Consensus 422 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 501 (515)
T 3iyg_H 422 QQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAA 501 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887778999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcC
Q psy6565 162 EMILRVDNIIKAA 174 (185)
Q Consensus 162 ~~iL~iD~iI~~~ 174 (185)
++||+||++|+..
T Consensus 502 ~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 502 CLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999863
No 5
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-47 Score=341.24 Aligned_cols=173 Identities=34% Similarity=0.543 Sum_probs=166.2
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.++|+++|+||+||+++++|||+|||+|+++++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 341 ~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~ 420 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGV 420 (515)
T ss_pred EEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCC-CCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASG-KSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEA 160 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~-~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~ 160 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|..+ +.++|+|..+|++.||.+.|||||+.+|+++|++|+++
T Consensus 421 eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~ 500 (515)
T 3iyg_G 421 EQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVET 500 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999754 45789999999999999999999999999999999999
Q ss_pred HHHHHcHHHHHhcC
Q psy6565 161 AEMILRVDNIIKAA 174 (185)
Q Consensus 161 a~~iL~iD~iI~~~ 174 (185)
|++||+||++|...
T Consensus 501 a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 501 AVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHheeecC
Confidence 99999999999753
No 6
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.4e-47 Score=340.60 Aligned_cols=178 Identities=31% Similarity=0.560 Sum_probs=161.6
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 304 ~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 383 (500)
T 3aq1_B 304 KEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGR 383 (500)
T ss_dssp EECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSH
T ss_pred EEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCch
Confidence 46799999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.++..++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 384 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 463 (500)
T 3aq1_B 384 EQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEAT 463 (500)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877678999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCCCCC
Q psy6565 162 EMILRVDNIIKAAPRKRT 179 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~~~~ 179 (185)
++||+||++|...|++++
T Consensus 464 ~~iL~iD~iI~~~~~~~~ 481 (500)
T 3aq1_B 464 VMILRIDDVVASKGSANQ 481 (500)
T ss_dssp HHHHCC------------
T ss_pred HHHHHHHHHHhcCccCCC
Confidence 999999999999876543
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.1e-47 Score=342.36 Aligned_cols=177 Identities=36% Similarity=0.619 Sum_probs=168.1
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|++|++|++++.|||+|||+|+.+++|++|+++|||+++|++++++++|||||++|++++.+|++++.+++++
T Consensus 346 ~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 425 (543)
T 3ruv_A 346 RKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGR 425 (543)
T ss_dssp EEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTT
T ss_pred EEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChH
Confidence 46899999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhh-CCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHA-SGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEA 160 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~-~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~ 160 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|. +++.++|+|..+|++.||.+.|||||+.+|+++|++|+++
T Consensus 426 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~ 505 (543)
T 3ruv_A 426 EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAES 505 (543)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997 6667899999999999999999999999999999999999
Q ss_pred HHHHHcHHHHHhcCCCCC
Q psy6565 161 AEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 161 a~~iL~iD~iI~~~~~~~ 178 (185)
|++||+||++|...|.+.
T Consensus 506 a~~iL~id~ii~~~~~~~ 523 (543)
T 3ruv_A 506 TEMLLRIDDVIAAEKLRG 523 (543)
T ss_dssp HHHHHTCCEEEEEC----
T ss_pred HHHHHhHHhheecCccCC
Confidence 999999999999887643
No 8
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.6e-47 Score=339.21 Aligned_cols=172 Identities=32% Similarity=0.638 Sum_probs=166.5
Q ss_pred EEeCC-eeEEEEEcCCC-CceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCC
Q psy6565 2 VMIGE-DTLLRFSGVPL-GEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTP 79 (185)
Q Consensus 2 ~~ig~-~~~~~~~~~~~-~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~ 79 (185)
.++|+ ++|++|++|++ +++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+
T Consensus 344 ~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 423 (518)
T 3iyg_D 344 VSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLS 423 (518)
T ss_pred EEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCC
Confidence 46788 89999999998 89999999999999999999999999999999999988999999999999999999998899
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHH
Q psy6565 80 GKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASE 159 (185)
Q Consensus 80 ~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~ 159 (185)
+++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++.++|+|..+|++.||.+.|||||+.+|+++|++|++
T Consensus 424 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e 503 (518)
T 3iyg_D 424 GMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATE 503 (518)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998877789999999999999999999999999999999999
Q ss_pred HHHHHHcHHHHHhc
Q psy6565 160 AAEMILRVDNIIKA 173 (185)
Q Consensus 160 ~a~~iL~iD~iI~~ 173 (185)
+|++|||||+||+.
T Consensus 504 ~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 504 TVRSILKIDDVVNT 517 (518)
T ss_pred HHHHHHhhcceEec
Confidence 99999999999875
No 9
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.6e-47 Score=344.11 Aligned_cols=179 Identities=36% Similarity=0.562 Sum_probs=170.5
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
++||+++|++|+||+++++|||+|||+|+.+++|++|+++|||+++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 364 ~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 443 (559)
T 3p9d_A 364 AKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSR 443 (559)
T ss_dssp EECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTT
T ss_pred EEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChH
Confidence 35899999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCC------------ceeEeCCCCcccccccCCccccHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKS------------TAGLDMDQGKVGDMSQLGITESYVV 149 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~------------~~Gid~~~~~~~d~~~~gI~ep~~v 149 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|..++. ++|+|..+|++.||.++|||||+.+
T Consensus 444 eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 523 (559)
T 3p9d_A 444 EQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTIS 523 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHH
Confidence 9999999999999999999999999999999999999976544 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcHHHHHhcCCCCCCc
Q psy6565 150 KRQVLTSASEAAEMILRVDNIIKAAPRKRTE 180 (185)
Q Consensus 150 k~~~l~~a~~~a~~iL~iD~iI~~~~~~~~~ 180 (185)
|+++|++|+++|++|||||++|...|+++.+
T Consensus 524 k~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 524 KVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 9999999999999999999999988766533
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.4e-47 Score=341.01 Aligned_cols=177 Identities=34% Similarity=0.588 Sum_probs=166.5
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 351 ~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~ 430 (543)
T 1a6d_B 351 VKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGR 430 (543)
T ss_dssp EEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSS
T ss_pred EEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCCh
Confidence 46899999999999999999999999999999999999999999999999998899999999999999999999888999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.++..++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 431 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 510 (543)
T 1a6d_B 431 QQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAA 510 (543)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCCCC
Q psy6565 162 EMILRVDNIIKAAPRKR 178 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~~~ 178 (185)
++||+||++|...|++.
T Consensus 511 ~~iL~id~iI~~~~~~~ 527 (543)
T 1a6d_B 511 IMILRIDDVIATKSSSS 527 (543)
T ss_dssp HHHHHEEEEEC------
T ss_pred HHHHHHHHHHhcCccCC
Confidence 99999999999877544
No 11
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-47 Score=344.42 Aligned_cols=177 Identities=33% Similarity=0.573 Sum_probs=166.7
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|+||++|++++.|||+|||+|+++++|++|+++|||+++|++++++++|||||++|++++.+|++++.+++++
T Consensus 360 ~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 439 (553)
T 3ko1_A 360 RKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGK 439 (553)
T ss_dssp CCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSH
T ss_pred hhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCCh
Confidence 35789999999999999999999999999999999999999999999999998899999999999999999998888999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCC-CceeEeCCCCcccccccCCccccHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGK-STAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEA 160 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~-~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~ 160 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++ .++|+|..+|++.||.+.|||||+.+|+++|++|+++
T Consensus 440 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 519 (553)
T 3ko1_A 440 EQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEA 519 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchh
Confidence 999999999999999999999999999999999999997765 6899999999999999999999999999999999999
Q ss_pred HHHHHcHHHHHhcCCCCC
Q psy6565 161 AEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 161 a~~iL~iD~iI~~~~~~~ 178 (185)
|++||+||++|...|++.
T Consensus 520 a~~iL~iD~ii~~~~~~~ 537 (553)
T 3ko1_A 520 ATLVLRIDDVVSAGKKSG 537 (553)
T ss_dssp HHHHHHEEEECCC-----
T ss_pred heEEEehHHHHHhhhhcc
Confidence 999999999999877644
No 12
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-46 Score=334.05 Aligned_cols=172 Identities=32% Similarity=0.573 Sum_probs=165.4
Q ss_pred EEeCCeeEEEEEcCC-CCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCc
Q psy6565 2 VMIGEDTLLRFSGVP-LGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPG 80 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~-~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~ 80 (185)
.++|+++|++|++|+ .+++|||+|||+|+++++|++|+++|||+++|++++++++|||||++|++++.+|++++.+.++
T Consensus 337 ~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g 416 (512)
T 3iyg_Q 337 SEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPG 416 (512)
T ss_pred EEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCc
Confidence 468999999999997 4799999999999999999999999999999999999889999999999999999999988999
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCC--cccccccCCccccHHHHHHHHHHHH
Q psy6565 81 KEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQG--KVGDMSQLGITESYVVKRQVLTSAS 158 (185)
Q Consensus 81 ~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~--~~~d~~~~gI~ep~~vk~~~l~~a~ 158 (185)
++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..+| ++.||.+.|||||+.+|+++|++|+
T Consensus 417 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 417 LEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988778899999965 9999999999999999999999999
Q ss_pred HHHHHHHcHHHHHhc
Q psy6565 159 EAAEMILRVDNIIKA 173 (185)
Q Consensus 159 ~~a~~iL~iD~iI~~ 173 (185)
++|++||+||++|..
T Consensus 497 ~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 497 NAAVTVLRVDQIIMA 511 (512)
T ss_pred HHHHHHHhHhHheec
Confidence 999999999999975
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-46 Score=334.33 Aligned_cols=172 Identities=38% Similarity=0.630 Sum_probs=165.4
Q ss_pred EEeCC--eeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCC
Q psy6565 2 VMIGE--DTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTP 79 (185)
Q Consensus 2 ~~ig~--~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~ 79 (185)
++||+ ++|++|++|++++.|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+
T Consensus 340 ~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 419 (515)
T 3iyg_E 340 ISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCP 419 (515)
T ss_pred EEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCC
Confidence 46787 8999999999999999999999999999999999999999999999988999999999999999999998899
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhC-CCCceeEeCCCCcccccccCCccccHHHHHHHHHHHH
Q psy6565 80 GKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHAS-GKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSAS 158 (185)
Q Consensus 80 ~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~-~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~ 158 (185)
+++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++.++|+|..+|++.||.++|||||+.+|+++|++|+
T Consensus 420 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 499 (515)
T 3iyg_E 420 TLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLAT 499 (515)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975 4568999999999999999999999999999999999
Q ss_pred HHHHHHHcHHHHHhc
Q psy6565 159 EAAEMILRVDNIIKA 173 (185)
Q Consensus 159 ~~a~~iL~iD~iI~~ 173 (185)
++|++||+||++|+.
T Consensus 500 ~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 500 QMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHhHHHhhcC
Confidence 999999999999975
No 14
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.5e-47 Score=343.67 Aligned_cols=178 Identities=31% Similarity=0.588 Sum_probs=169.9
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.++|+++|++|+||+++++|||+|||+|+++++|++|+++|||+++|++++++++|||||++|++++.+|++++.+++++
T Consensus 355 ~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 434 (550)
T 3p9d_G 355 MQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGK 434 (550)
T ss_dssp CCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCST
T ss_pred EEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChH
Confidence 35799999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|..+++++|+|..+|++.||.++|||||+.+|+++|++|+++|
T Consensus 435 eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 514 (550)
T 3p9d_G 435 QQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEAT 514 (550)
T ss_dssp THHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999777778999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCCCCC
Q psy6565 162 EMILRVDNIIKAAPRKRT 179 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~~~~ 179 (185)
++||+||++|...|+++.
T Consensus 515 ~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 515 NLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHTEEEEECCCCCC--
T ss_pred HHHHhHHHHhhCCCcccc
Confidence 999999999998876543
No 15
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.5e-48 Score=346.42 Aligned_cols=179 Identities=59% Similarity=0.935 Sum_probs=167.4
Q ss_pred EeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchH
Q psy6565 3 MIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGKE 82 (185)
Q Consensus 3 ~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~ 82 (185)
+||+++|++|+||+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.++++
T Consensus 347 ~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 426 (527)
T 3p9d_B 347 MLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKK 426 (527)
T ss_dssp CSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHH
T ss_pred EecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHH
Confidence 57899999999999999999999999999999999999999999999999988999999999999999999988889999
Q ss_pred HHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHHH
Q psy6565 83 AVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAE 162 (185)
Q Consensus 83 ~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~ 162 (185)
|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..+|++.||.+.|||||+.+|+++|++|+++|+
T Consensus 427 q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~ 506 (527)
T 3p9d_B 427 SLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAE 506 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998777789999999999999999999999999999999999999
Q ss_pred HHHcHHHHHhcCCCCCCcC
Q psy6565 163 MILRVDNIIKAAPRKRTED 181 (185)
Q Consensus 163 ~iL~iD~iI~~~~~~~~~~ 181 (185)
+||+||++|...|+++.++
T Consensus 507 ~iL~id~ii~~~~~~~~~~ 525 (527)
T 3p9d_B 507 VLLRVDNIIRARPRTANRQ 525 (527)
T ss_dssp HHHHCCEEEEEC-------
T ss_pred HHHhHHHHHhcCCcccCCC
Confidence 9999999999988766444
No 16
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.1e-46 Score=338.12 Aligned_cols=177 Identities=37% Similarity=0.581 Sum_probs=168.2
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 353 ~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~ 432 (548)
T 1q3q_A 353 RKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGK 432 (548)
T ss_dssp EEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHH
T ss_pred EEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCc
Confidence 46899999999999999999999999999999999999999999999999998899999999999999999998888899
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 433 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 512 (548)
T 1q3q_A 433 EALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAA 512 (548)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999766668999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCCCC
Q psy6565 162 EMILRVDNIIKAAPRKR 178 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~~~ 178 (185)
++||+||++|...|+++
T Consensus 513 ~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 513 IMILRIDDVIAAKATKP 529 (548)
T ss_dssp HHHHTCCEEEECCC---
T ss_pred HHHHHHHHHHhcCCcCC
Confidence 99999999999877643
No 17
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.4e-46 Score=335.60 Aligned_cols=176 Identities=36% Similarity=0.620 Sum_probs=165.5
Q ss_pred EEeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCch
Q psy6565 2 VMIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGK 81 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 81 (185)
.+||+++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+++
T Consensus 350 ~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~ 429 (545)
T 1a6d_A 350 RKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGR 429 (545)
T ss_dssp EEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHH
T ss_pred EEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCcc
Confidence 46899999999999999999999999999999999999999999999999998899999999999999999999889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHH
Q psy6565 82 EAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAA 161 (185)
Q Consensus 82 ~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a 161 (185)
+|+++++|++||+.||++|++|||+|+.+++.+|++.|.++..++|+|..+|++.||.+.|||||+.+|+++|++|+++|
T Consensus 430 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 509 (545)
T 1a6d_A 430 EQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVA 509 (545)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877678999999999999999999999999999999999999
Q ss_pred HHHHcHHHHHhcCCCC
Q psy6565 162 EMILRVDNIIKAAPRK 177 (185)
Q Consensus 162 ~~iL~iD~iI~~~~~~ 177 (185)
++||+||++|...|++
T Consensus 510 ~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 510 TMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHTCCEEC------
T ss_pred HHHHHHHHHHhcccCC
Confidence 9999999999987754
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.8e-47 Score=339.75 Aligned_cols=174 Identities=24% Similarity=0.446 Sum_probs=166.6
Q ss_pred EeCCeeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhh---hhcCCC
Q psy6565 3 MIGEDTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISN---EATRTP 79 (185)
Q Consensus 3 ~ig~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~---~~~~~~ 79 (185)
+||+++|+||+||+++++|||+|||+|+++++|++|+++||++++|++++++++|||||++|++++.+|++ ++.+.+
T Consensus 358 ~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~ 437 (546)
T 3p9d_F 358 TIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAK 437 (546)
T ss_dssp CCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTT
T ss_pred EecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCc
Confidence 68999999999999999999999999999999999999999999999999988999999999999999999 588899
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhC-----CCCceeEeCCCCcccccccCCccccHHHHHHHH
Q psy6565 80 GKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHAS-----GKSTAGLDMDQGKVGDMSQLGITESYVVKRQVL 154 (185)
Q Consensus 80 ~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~-----~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l 154 (185)
+++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++.++|||..+|++.||.+.|||||+.+|+++|
T Consensus 438 g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 517 (546)
T 3p9d_F 438 GKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAI 517 (546)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHH
Confidence 999999999999999999999999999999999999999872 445799999999999999999999999999999
Q ss_pred HHHHHHHHHHHcHHHHHhcCCC
Q psy6565 155 TSASEAAEMILRVDNIIKAAPR 176 (185)
Q Consensus 155 ~~a~~~a~~iL~iD~iI~~~~~ 176 (185)
++|+++|++|||||+||+.++.
T Consensus 518 ~~A~~~a~~iL~iD~ii~~~~~ 539 (546)
T 3p9d_F 518 TGATGIASNLLLCDELLRAGRS 539 (546)
T ss_dssp HHHHHHHHHHHTEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999998764
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.1e-46 Score=336.92 Aligned_cols=174 Identities=34% Similarity=0.581 Sum_probs=166.3
Q ss_pred EEeCC--eeEEEEEcCCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCC
Q psy6565 2 VMIGE--DTLLRFSGVPLGEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTP 79 (185)
Q Consensus 2 ~~ig~--~~~~~~~~~~~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~ 79 (185)
++||+ ++|++|++|+++++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.+
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~ 462 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQR 462 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTC
T ss_pred EEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCc
Confidence 35675 8999999999999999999999999999999999999999999999988999999999999999999998899
Q ss_pred chHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhC-CCCceeEeCCCCcccccccCCccccHHHHHHHHHHHH
Q psy6565 80 GKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHAS-GKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSAS 158 (185)
Q Consensus 80 ~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~-~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~ 158 (185)
+++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++.++|+|..+|++.||.+.|||||+.+|+++|++|+
T Consensus 463 g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 542 (562)
T 3p9d_E 463 GIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLAT 542 (562)
T ss_dssp TTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975 4568999999999999999999999999999999999
Q ss_pred HHHHHHHcHHHHHhcCC
Q psy6565 159 EAAEMILRVDNIIKAAP 175 (185)
Q Consensus 159 ~~a~~iL~iD~iI~~~~ 175 (185)
++|++||+||++|..++
T Consensus 543 e~a~~iL~iD~ii~~~~ 559 (562)
T 3p9d_E 543 QLCRMILKIDNVIISGK 559 (562)
T ss_dssp HHHHHHHTEEEEEECCC
T ss_pred HHHHHHHHHHHhhcCCC
Confidence 99999999999999764
No 20
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=4.3e-46 Score=335.97 Aligned_cols=174 Identities=36% Similarity=0.582 Sum_probs=162.8
Q ss_pred EEeCCeeEEEEEcCCCCce--------------------------------------------------------EEEEe
Q psy6565 2 VMIGEDTLLRFSGVPLGEA--------------------------------------------------------CTIVI 25 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~~~--------------------------------------------------------~Ti~i 25 (185)
++||+++|++|+||++++. +||+|
T Consensus 358 ~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~l 437 (590)
T 3p9d_C 358 EMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIML 437 (590)
T ss_dssp CEETTEECEEECC---------------------------------------------------------CCCSCCCEEE
T ss_pred EEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEE
Confidence 3689999999999988777 99999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcC
Q psy6565 26 RGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAG 105 (185)
Q Consensus 26 ~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG 105 (185)
||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.++++++|+++++|++||+.||++|++|||
T Consensus 438 rg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG 517 (590)
T 3p9d_C 438 RGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAG 517 (590)
T ss_dssp ECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHHHHHHHHHcHHHHHhcCC
Q psy6565 106 YDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAEMILRVDNIIKAAP 175 (185)
Q Consensus 106 ~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~~iL~iD~iI~~~~ 175 (185)
+|+.+++.+|++.|..++.++|+|..+|++.||.+.|||||+.+|+++|++|+++|++||+||++|...|
T Consensus 518 ~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~ 587 (590)
T 3p9d_C 518 GDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVR 587 (590)
T ss_dssp SCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC
T ss_pred CCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999987777899999999999999999999999999999999999999999999998765
No 21
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1e-46 Score=336.96 Aligned_cols=172 Identities=35% Similarity=0.585 Sum_probs=166.1
Q ss_pred EEeCCeeEEEEEcCC--C-CceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcHHHHHHHHHHhhhhcCC
Q psy6565 2 VMIGEDTLLRFSGVP--L-GEACTIVIRGATQQIIDEADRSLHDALCVLAATVRETRVVYGGGCSEMLMAVAISNEATRT 78 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~--~-~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~ 78 (185)
.++|+++|++|++|+ + +++|||+|||+|+.+++|++|+++||++++|++++++++|||||++|++++.+|++++.+.
T Consensus 353 ~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~ 432 (528)
T 3p9d_D 353 IDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSM 432 (528)
T ss_dssp CEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTS
T ss_pred EEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhcc
Confidence 358999999999999 6 8999999999999999999999999999999999998899999999999999999998889
Q ss_pred CchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceeEeCCCCcccccccCCccccHHHHHHHHHHHH
Q psy6565 79 PGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAGLDMDQGKVGDMSQLGITESYVVKRQVLTSAS 158 (185)
Q Consensus 79 ~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~ 158 (185)
++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..+|++.||.+.|||||+.+|+++|++|+
T Consensus 433 ~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 512 (528)
T 3p9d_D 433 EGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLAS 512 (528)
T ss_dssp CHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999999
Q ss_pred HHHHHHHcHHHHHhc
Q psy6565 159 EAAEMILRVDNIIKA 173 (185)
Q Consensus 159 ~~a~~iL~iD~iI~~ 173 (185)
++|++|||||+||..
T Consensus 513 e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 513 ECVKSILRIDDIAFS 527 (528)
T ss_dssp HHHHHHHHCSCCCBC
T ss_pred HHHHHHHhhhHheec
Confidence 999999999999875
No 22
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.6e-47 Score=342.33 Aligned_cols=177 Identities=29% Similarity=0.491 Sum_probs=157.0
Q ss_pred EEeCCeeEEEEEcCC--CCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHhh--cCcEeecCcHHHHHHHHHHhhhhcC
Q psy6565 2 VMIGEDTLLRFSGVP--LGEACTIVIRGATQQIIDEADRSLHDALCVLAATVR--ETRVVYGGGCSEMLMAVAISNEATR 77 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~--~~~~~Ti~i~G~s~~~l~E~~r~i~dal~~~~~~l~--~~~vvpGGG~~e~~l~~~L~~~~~~ 77 (185)
.++|+++|++|++|+ ++++|||+|||+|+.+++|++|+++|||+++|++++ ++++|||||++|++++.+|++++.+
T Consensus 361 ~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~ 440 (568)
T 3p9d_H 361 MEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGER 440 (568)
T ss_dssp CEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHT
T ss_pred EEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhcc
Confidence 468999999999998 789999999999999999999999999999999999 8999999999999999999999988
Q ss_pred CCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhC--------CCCceeEeCCCCc---ccccccCCcccc
Q psy6565 78 TPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHAS--------GKSTAGLDMDQGK---VGDMSQLGITES 146 (185)
Q Consensus 78 ~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~--------~~~~~Gid~~~~~---~~d~~~~gI~ep 146 (185)
.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++.++|+|..+|+ +.||.++|||||
T Consensus 441 ~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp 520 (568)
T 3p9d_H 441 TPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDM 520 (568)
T ss_dssp CCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEc
Confidence 99999999999999999999999999999999999999999865 5567999999997 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcHHHHHhcCCCCC
Q psy6565 147 YVVKRQVLTSASEAAEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 147 ~~vk~~~l~~a~~~a~~iL~iD~iI~~~~~~~ 178 (185)
+.+|+++|++|+++|++|||||++|..+|...
T Consensus 521 ~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~ 552 (568)
T 3p9d_H 521 LATKKFAINVATEAATTVLSIDQIIMAKKAGG 552 (568)
T ss_dssp HHHHHHHHHCCEECBCCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhhccccCC
Confidence 99999999999999999999999999887643
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-43 Score=317.58 Aligned_cols=173 Identities=26% Similarity=0.393 Sum_probs=163.0
Q ss_pred EeCCeeEEEEEcCCCC-----------------------------------ceEEEEecCCChhhHHHHHHHHHHHHHHH
Q psy6565 3 MIGEDTLLRFSGVPLG-----------------------------------EACTIVIRGATQQIIDEADRSLHDALCVL 47 (185)
Q Consensus 3 ~ig~~~~~~~~~~~~~-----------------------------------~~~Ti~i~G~s~~~l~E~~r~i~dal~~~ 47 (185)
.+++++|++|++|+++ ++|||+|||+|+.+++|++|+++||++++
T Consensus 322 ~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~ 401 (543)
T 1we3_A 322 RITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNAT 401 (543)
T ss_dssp EECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 4678899999999863 78999999999999999999999999999
Q ss_pred HHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCcee
Q psy6565 48 AATVRETRVVYGGGCSEMLMAVAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAG 127 (185)
Q Consensus 48 ~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~G 127 (185)
|++++++ +|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. +.++|
T Consensus 402 r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~--~~~~G 478 (543)
T 1we3_A 402 RAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK--NPRYG 478 (543)
T ss_dssp HHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS--CTTEE
T ss_pred HHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC--CCCEE
Confidence 9999995 99999999999999999998888999999999999999999999999999999999999999873 45799
Q ss_pred EeCCCCcccccccCCccccHHHHHHHHHHHHHHHHHHHcHHHHHhcCCCCC
Q psy6565 128 LDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 128 id~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~~iL~iD~iI~~~~~~~ 178 (185)
+|..+|++.||.+.|||||+.+|+++|++|+++|++||++|++|...|++.
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 529 (543)
T 1we3_A 479 FNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKK 529 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-
T ss_pred EeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 999999999999999999999999999999999999999999999887633
No 24
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.8e-43 Score=314.19 Aligned_cols=171 Identities=23% Similarity=0.324 Sum_probs=151.1
Q ss_pred EEeCCeeEEEEEcCCCC-----------------------------------ceEEEEecCCChhhHHHHHHHHHHHHHH
Q psy6565 2 VMIGEDTLLRFSGVPLG-----------------------------------EACTIVIRGATQQIIDEADRSLHDALCV 46 (185)
Q Consensus 2 ~~ig~~~~~~~~~~~~~-----------------------------------~~~Ti~i~G~s~~~l~E~~r~i~dal~~ 46 (185)
+.+++++|++|++|.++ ++|||+|||+|+.+++|++|+++||+++
T Consensus 321 v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a 400 (546)
T 3rtk_A 321 VVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRN 400 (546)
T ss_dssp EEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHH
T ss_pred EEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 35789999999999874 3899999999999999999999999999
Q ss_pred HHHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCce
Q psy6565 47 LAATVRETRVVYGGGCSEMLMAVAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTA 126 (185)
Q Consensus 47 ~~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~ 126 (185)
+|+++++ ++|||||++|++++.+|++++ .++++|+++++|++||+.||++|++|||+|+.+++.+|++.+ ..+
T Consensus 401 ~r~av~~-giVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~----~~~ 473 (546)
T 3rtk_A 401 AKAAVEE-GIVAGGGVTLLQAAPTLDELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP----AGH 473 (546)
T ss_dssp HHHHHHH-CEEETTTHHHHTTGGGSTTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC----TTE
T ss_pred HHHHHhC-CcccCCcHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCE
Confidence 9999999 599999999999999999987 789999999999999999999999999999999999999842 238
Q ss_pred eEeCCCCcccccccCCccccHHHHHHHHHHHHHHHHHHHcHHHHHhcCCCCCC
Q psy6565 127 GLDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAEMILRVDNIIKAAPRKRT 179 (185)
Q Consensus 127 Gid~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~~iL~iD~iI~~~~~~~~ 179 (185)
|+|..+|++.||.+.|||||+.+|+++|++|+++|++||+||++|...|++.+
T Consensus 474 G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~ 526 (546)
T 3rtk_A 474 GLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEK 526 (546)
T ss_dssp ECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred eEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999998876543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.3e-43 Score=314.95 Aligned_cols=171 Identities=23% Similarity=0.365 Sum_probs=159.6
Q ss_pred EeCCeeEEEEEcCCCC-----------------------------------ceEEEEecCCChhhHHHHHHHHHHHHHHH
Q psy6565 3 MIGEDTLLRFSGVPLG-----------------------------------EACTIVIRGATQQIIDEADRSLHDALCVL 47 (185)
Q Consensus 3 ~ig~~~~~~~~~~~~~-----------------------------------~~~Ti~i~G~s~~~l~E~~r~i~dal~~~ 47 (185)
.+++++|++|++|+++ ++|||+|||+|+.+++|++|+++||++++
T Consensus 324 ~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~ 403 (545)
T 1iok_A 324 SINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNAT 403 (545)
T ss_dssp EECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 4578899999999864 78999999999999999999999999999
Q ss_pred HHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCcee
Q psy6565 48 AATVRETRVVYGGGCSEMLMAVAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAG 127 (185)
Q Consensus 48 ~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~G 127 (185)
|++++++ +|||||++|++++.+|++++. .++++|+++++|++||+.||++|++|||+|+.+++.+|++.| +.++|
T Consensus 404 r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G 478 (545)
T 1iok_A 404 RAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFG 478 (545)
T ss_dssp HHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEE
T ss_pred HHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCee
Confidence 9999995 999999999999999999876 789999999999999999999999999999999999999766 35799
Q ss_pred EeCCCCcccccccCCccccHHHHHHHHHHHHHHHHHHHcHHHHHhcCCCCC
Q psy6565 128 LDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 128 id~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~~iL~iD~iI~~~~~~~ 178 (185)
+|..+|++.||.+.|||||+.+|+++|++|+++|++||+||++|...|++.
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 479 FNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPK 529 (545)
T ss_dssp EETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC---
T ss_pred EeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccC
Confidence 999999999999999999999999999999999999999999999987654
No 26
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.3e-42 Score=309.49 Aligned_cols=170 Identities=22% Similarity=0.341 Sum_probs=159.4
Q ss_pred EeCCeeEEEEEcCCCC-----------------------------------ceEEEEecCCChhhHHHHHHHHHHHHHHH
Q psy6565 3 MIGEDTLLRFSGVPLG-----------------------------------EACTIVIRGATQQIIDEADRSLHDALCVL 47 (185)
Q Consensus 3 ~ig~~~~~~~~~~~~~-----------------------------------~~~Ti~i~G~s~~~l~E~~r~i~dal~~~ 47 (185)
.+++++|++|++|+++ ++|||+|||+|+.+++|++|+++||++++
T Consensus 323 ~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~ 402 (547)
T 1kp8_A 323 VINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHAT 402 (547)
T ss_dssp EECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHH
Confidence 4678899999999864 78999999999999999999999999999
Q ss_pred HHHhhcCcEeecCcHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCcee
Q psy6565 48 AATVRETRVVYGGGCSEMLMAVAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRAAHASGKSTAG 127 (185)
Q Consensus 48 ~~~l~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~~~~~~~~~G 127 (185)
|++++++ +|||||++|++++.+|++++. .++++|+++++|++||+.||++|++|||+|+.+++.+|++. +.++|
T Consensus 403 r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G 476 (547)
T 1kp8_A 403 RAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYG 476 (547)
T ss_dssp HHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEE
T ss_pred HHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEe
Confidence 9999995 999999999999999999876 78999999999999999999999999999999999999964 35799
Q ss_pred EeCCCCcccccccCCccccHHHHHHHHHHHHHHHHHHHcHHHHHhcCCCCC
Q psy6565 128 LDMDQGKVGDMSQLGITESYVVKRQVLTSASEAAEMILRVDNIIKAAPRKR 178 (185)
Q Consensus 128 id~~~~~~~d~~~~gI~ep~~vk~~~l~~a~~~a~~iL~iD~iI~~~~~~~ 178 (185)
+|..+|++.||.+.|||||+.+|+++|++|+++|++||++|++|...|++.
T Consensus 477 ~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 477 YNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred EeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 999999999999999999999999999999999999999999999987654
No 27
>1wy1_A Hypothetical protein PH0671; structural genomics, riken structural genomics/proteomics in RSGI, transferase; 1.80A {Pyrococcus horikoshii}
Probab=51.47 E-value=31 Score=25.78 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=21.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRETRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~--~e~~l~~~ 70 (185)
++..++..|..|+.--..+- ++. +++|||+- +.+++++.
T Consensus 80 ~~~~v~~LE~~id~~~~~lp--l~~-FILPgg~~~aA~Lh~aRt 120 (172)
T 1wy1_A 80 SEERIKWLEGLISRYEEMVN--LKS-FVLPGGTLESAKLDVCRT 120 (172)
T ss_dssp CHHHHHHHHHHHHHHHTTCS--CCS-SCCSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhCC--CcC-eEECCCCHHHHHHHHHHH
Confidence 44555555555554333332 444 78899975 34444443
No 28
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=48.99 E-value=13 Score=19.18 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=15.6
Q ss_pred CCChhhHHHHHHHHHHHHH
Q psy6565 27 GATQQIIDEADRSLHDALC 45 (185)
Q Consensus 27 G~s~~~l~E~~r~i~dal~ 45 (185)
.|-+++++|.+..|+.|+.
T Consensus 9 spcdqeikelennirkals 27 (31)
T 2wh0_Q 9 SPCDQEIKELENNIRKALS 27 (31)
T ss_pred CchHHHHHHHHHHHHHHhc
Confidence 3568899999999988874
No 29
>2ah6_A BH1595, unknown conserved protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bacillus halodurans}
Probab=48.46 E-value=88 Score=24.02 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=19.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRETRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..|+.--..+ --++. .++|||+- +.+++++.
T Consensus 99 ~~~~v~~LE~~Id~~~~~l-~pl~~-FILPGG~~~aA~LHvaRT 140 (208)
T 2ah6_A 99 KQEIVDFLEQRIDAYIKEA-PELER-FILPGGSEAAASLHVCRT 140 (208)
T ss_dssp CHHHHHHHHHHHHHHHHHS-CCCCS-CEESCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhC-CCCcc-eeeCCCCHHHHHHHHHHH
Confidence 4455555555554322211 11333 78899975 34444443
No 30
>2nt8_A Cobalamin adenosyltransferase; ATP binding; HET: ATP; 1.68A {Lactobacillus reuteri}
Probab=42.71 E-value=1.1e+02 Score=23.74 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=19.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhc--CcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRE--TRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~--~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..|+ ....-+.. ..++|||+- +.+++++.
T Consensus 123 ~~~~v~~LE~~Id----~~~~~lppl~~FILPGGs~~aA~LHvaRT 164 (223)
T 2nt8_A 123 QEQPTVWLEEKID----NYTQVVPAVKKFILPGGTQLASALHVART 164 (223)
T ss_dssp CHHHHHHHHHHHH----HHHHHSCCCSSCEESCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----HHHhhCCCCCceEeCCCCHHHHHHHHHHH
Confidence 3444555555444 33333321 278899975 34444443
No 31
>2zhy_A ATP:COB(I)alamin adenosyltransferase, putative; helix bundle; 1.80A {Burkholderia thailandensis} PDB: 2zhz_A*
Probab=42.39 E-value=88 Score=23.46 Aligned_cols=8 Identities=25% Similarity=0.422 Sum_probs=6.3
Q ss_pred cEeecCcH
Q psy6565 55 RVVYGGGC 62 (185)
Q Consensus 55 ~vvpGGG~ 62 (185)
.++|||+-
T Consensus 109 FILPgg~~ 116 (183)
T 2zhy_A 109 FILPGGAR 116 (183)
T ss_dssp CCBSCSSH
T ss_pred eeeCCCCH
Confidence 77799975
No 32
>1nog_A Conserved hypothetical protein TA0546; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics; 1.55A {Thermoplasma acidophilum} SCOP: a.25.2.2
Probab=40.88 E-value=1.1e+02 Score=22.79 Aligned_cols=40 Identities=25% Similarity=0.362 Sum_probs=19.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRETRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..|+.--..+ --++. .++|||+- +.+++++.
T Consensus 79 ~~~~v~~LE~~id~~~~~l-~~l~~-FILPGg~~~aA~LH~aRt 120 (177)
T 1nog_A 79 TREMIDYLEARVKEMKAEI-GKIEL-FVVPGGSVESASLHMARA 120 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CCCCS-CBCSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhC-CCCCc-eeeCCCCHHHHHHHHHHH
Confidence 4445555555554322222 11333 77899975 34444443
No 33
>1wvt_A Hypothetical protein ST2180; structural genomics, unknown function; 2.30A {Sulfolobus tokodaii}
Probab=40.37 E-value=96 Score=23.01 Aligned_cols=16 Identities=38% Similarity=0.301 Sum_probs=9.8
Q ss_pred cEeecCcH--HHHHHHHH
Q psy6565 55 RVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 55 ~vvpGGG~--~e~~l~~~ 70 (185)
.++|||+- +.+++++.
T Consensus 100 FILPgg~~~aA~Lh~aRt 117 (172)
T 1wvt_A 100 FVLPGGHIASSFLHLARA 117 (172)
T ss_dssp CEESCSSHHHHHHHHHHH
T ss_pred eeeCCCCHHHHHHHHHHH
Confidence 78899975 34444443
No 34
>1woz_A 177AA long conserved hypothetical protein (ST1454; structural genomics, unknown function; 1.94A {Sulfolobus tokodaii}
Probab=38.88 E-value=1.2e+02 Score=22.59 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=19.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRETRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..++.--..+ --++. .++|||+- +.+++++.
T Consensus 78 ~~~~v~~LE~~id~~~~~l-~~l~~-FILPGg~~~aA~LH~aRt 119 (177)
T 1woz_A 78 DEKYVKWLEERTVEYRKES-GPVKL-FVIPGGSEEASVLHVTRS 119 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CCCEE-EEESCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhC-CCCCc-eecCCCCHHHHHHHHHHH
Confidence 4445555555554332222 11334 77899975 33444433
No 35
>1rty_A YVQK protein; all alpha-helical trimeric protein, structural genomics, PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: a.25.2.2
Probab=38.39 E-value=1.3e+02 Score=22.78 Aligned_cols=40 Identities=13% Similarity=0.175 Sum_probs=18.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcCcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRETRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..|+.--..+ --++. .++|||+- +.+++++.
T Consensus 86 ~~~~v~~LE~~Id~~~~~l-~pl~~-FILPGG~~~aA~LH~aRt 127 (193)
T 1rty_A 86 TEESVSFLETRIDAYTAEA-PELKK-FILPGGSKCASLLHIART 127 (193)
T ss_dssp CHHHHHHHHHHHHHHHHHS-CCCCS-CBCSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhC-CCCCc-eeeCCCCHHHHHHHHHHH
Confidence 3444555555544322211 11333 77899975 34444443
No 36
>3ci3_A Cobalamin adenosyltransferase PDUO-like protein; adenosyltransferase variant, adenosylcobalamin binding, ATP binding; HET: 3PO 5AD B12; 1.11A {Lactobacillus reuteri} PDB: 3ci1_A* 3ci4_A* 2r6t_A* 2r6x_A* 3gah_A* 3gai_A* 3gaj_A*
Probab=36.57 E-value=1.3e+02 Score=22.67 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=18.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhc--CcEeecCcH--HHHHHHHH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRE--TRVVYGGGC--SEMLMAVA 70 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~--~~vvpGGG~--~e~~l~~~ 70 (185)
++..++++|..|+ ....-+.. ..++|||+- +.+++++.
T Consensus 94 ~~~~v~~LE~~id----~~~~~l~pl~~FILPGG~~~aA~LH~aRt 135 (194)
T 3ci3_A 94 QEQPTVWLEEKID----NYTQVVPAVKKFILPGGTQLASALHVART 135 (194)
T ss_dssp CHHHHHHHHHHHH----HHHHHSCCCSSCBCSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----HHHhhCCCCCceeeCCCCHHHHHHHHHHH
Confidence 3444455544444 33333321 277899975 34444443
No 37
>3ke4_A Hypothetical cytosolic protein; helix bundle, transferase; 1.90A {Bacillus cereus} PDB: 3ke5_A*
Probab=34.99 E-value=1.3e+02 Score=23.27 Aligned_cols=8 Identities=25% Similarity=0.384 Sum_probs=6.7
Q ss_pred cEeecCcH
Q psy6565 55 RVVYGGGC 62 (185)
Q Consensus 55 ~vvpGGG~ 62 (185)
.++|||+-
T Consensus 129 FILPGGs~ 136 (213)
T 3ke4_A 129 FILPGGSE 136 (213)
T ss_dssp CBCSCSSH
T ss_pred eEeCCCCH
Confidence 88899975
No 38
>3sl9_C B-cell CLL/lymphoma 9 protein; armadillo repeat, components of the WNT signaling pathway, B catenin, signaling protein, protein binding; 2.20A {Homo sapiens} PDB: 2gl7_C
Probab=33.17 E-value=56 Score=19.14 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=20.8
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHhhcCcEeec
Q psy6565 26 RGATQQIIDEADRSLHDALCVLAATVRETRVVYG 59 (185)
Q Consensus 26 ~G~s~~~l~E~~r~i~dal~~~~~~l~~~~vvpG 59 (185)
.|-++.-++.++|+++..-.+-|..+.+.+=.+|
T Consensus 8 ~gls~eqlehrerslqtlrdi~r~~~pDdkd~~~ 41 (55)
T 3sl9_C 8 DGLSQEQLEHRERSLQTLRDIQRMLFPDEKEFTG 41 (55)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 4678889999999998776666666766554443
No 39
>2idx_A COB(I)yrinic acid A,C-diamide adenosyltransferase; ATP, cobalamin; HET: ATP; 2.50A {Homo sapiens}
Probab=29.73 E-value=1.2e+02 Score=23.05 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=32.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhc--CcEeecCcH--HHHHHHHHHhhhhc----------CCCchHHHHHHHHHHHhh
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRE--TRVVYGGGC--SEMLMAVAISNEAT----------RTPGKEAVAMEAFARSLA 94 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~--~~vvpGGG~--~e~~l~~~L~~~~~----------~~~~~~~l~~~~~a~aL~ 94 (185)
++..++++|..|+ ....-+.. .+++|||+- +.+++++.+-..+. .++....--++-+++-|-
T Consensus 92 ~~~~v~~LE~~Id----~~~~~lppl~~FILPGG~~~aA~LH~aRtv~RRAER~~v~l~~~~~v~~~~~~yLNRLSD~LF 167 (196)
T 2idx_A 92 KAGPILELEQWID----KYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMGETDANVAKFLNRLSDYLF 167 (196)
T ss_dssp CSHHHHHHHHHHH----HHHHTSCCCCSCBCSCSSHHHHHHHHHHHHHHHHHHHHTTTTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----HHHhhCCCCCceEECCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 3444455554444 33333321 277899975 44555544432221 111222233555566666
Q ss_pred hhHHHHH
Q psy6565 95 MLPTTIA 101 (185)
Q Consensus 95 ~ip~~L~ 101 (185)
.+.+.+.
T Consensus 168 vlaR~~n 174 (196)
T 2idx_A 168 TLARYAA 174 (196)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 40
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1
Probab=29.67 E-value=63 Score=25.12 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=27.8
Q ss_pred HHHhhhhcCCCchHHHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHH
Q psy6565 69 VAISNEATRTPGKEAVAMEAFARSLAMLPTTIADNAGYDSAQLVSELRA 117 (185)
Q Consensus 69 ~~L~~~~~~~~~~~~l~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~ 117 (185)
+.++....+-+|+...+.+++.+||+.|-+. .|.||++++.+-..
T Consensus 87 ~~~~~~~r~n~GKK~~A~~Iv~~Af~iI~~~----t~~nPl~Vl~~Ai~ 131 (218)
T 1iqv_A 87 HFMRREHRSLNSKKVRAYEVVKEAFKIIEKR----TGKNPIQVLVWAIE 131 (218)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHH----HSSCHHHHHHHHHH
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHHH
Confidence 3344333334789999999999999987543 47899998876544
No 41
>2g2d_A ATP:cobalamin adenosyltransferase; helix bundle, trimer, structural genomics, PSI, protein STRU initiative; 2.00A {Mycobacterium tuberculosis}
Probab=24.27 E-value=1.1e+02 Score=23.20 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=15.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhc--CcEeecCcH
Q psy6565 29 TQQIIDEADRSLHDALCVLAATVRE--TRVVYGGGC 62 (185)
Q Consensus 29 s~~~l~E~~r~i~dal~~~~~~l~~--~~vvpGGG~ 62 (185)
++..++++|..|+ ....-+.. .+++|||+-
T Consensus 93 ~~~~v~~LE~~id----~~~~~l~pl~~FILPGG~~ 124 (193)
T 2g2d_A 93 AQSYIDRLEGWCD----AYNAGLPALKSFVLPGGSP 124 (193)
T ss_dssp CHHHHHHHHHHHH----HHHTTCCCCSSCEESCSSH
T ss_pred CHHHHHHHHHHHH----HHHhhCCCCCceeeCCCCH
Confidence 3444555554444 33333321 277899975
No 42
>3a9l_A Poly-gamma-glutamate hydrolase; zinc ION binding, open alpha/beta mixed core structure; 1.90A {Bacillus phage PHINIT1}
Probab=22.29 E-value=90 Score=24.19 Aligned_cols=29 Identities=10% Similarity=0.195 Sum_probs=21.4
Q ss_pred CeeEEEEEcCCCCceEEEEecCCChhhHH
Q psy6565 6 EDTLLRFSGVPLGEACTIVIRGATQQIID 34 (185)
Q Consensus 6 ~~~~~~~~~~~~~~~~Ti~i~G~s~~~l~ 34 (185)
.+..+-|.||.....-+++|+|.+....+
T Consensus 96 ~~~~vsiHG~~~~~~~~v~vGG~d~~l~~ 124 (216)
T 3a9l_A 96 HTDAVSFHGYKDDYNKNTLVGGLNTELRN 124 (216)
T ss_dssp CSEEEEEEEECCSSCCCEEEESSCHHHHH
T ss_pred CCEEEEeeCCCCCCCcEEEECCCCHHHHH
Confidence 45567789998766578999999775333
Done!