BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6569
(164 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307189202|gb|EFN73650.1| U1 small nuclear ribonucleoprotein C [Camponotus floridanus]
Length = 175
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 79/88 (89%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVK++YQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPR 88
KIA+NPF GAAIPPP NL S + R
Sbjct: 61 KIASNPFAANKGAAIPPPPNLGSSLGSR 88
>gi|332017058|gb|EGI57857.1| U1 small nuclear ribonucleoprotein C [Acromyrmex echinatior]
Length = 175
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 79/88 (89%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVK++YQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPR 88
KIA+NPF GAAIPPP NL S + R
Sbjct: 61 KIASNPFAANKGAAIPPPPNLGSNLGSR 88
>gi|307206317|gb|EFN84374.1| U1 small nuclear ribonucleoprotein C [Harpegnathos saltator]
Length = 175
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 79/89 (88%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVK++YQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQ 89
KIA+NPF GAAIPPP NL S + R
Sbjct: 61 KIASNPFAANKGAAIPPPPNLGSSLGSRS 89
>gi|189234617|ref|XP_975233.2| PREDICTED: similar to CG5454 CG5454-PA [Tribolium castaneum]
gi|270001649|gb|EEZ98096.1| hypothetical protein TcasGA2_TC000509 [Tribolium castaneum]
Length = 153
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKG-GAAIPPPSNLSSL 84
KIANNPF G G AIPPP+ L+++
Sbjct: 61 KIANNPFAQPGKGVAIPPPAQLTAM 85
>gi|242010156|ref|XP_002425842.1| U1 small nuclear ribonucleoprotein C, putative [Pediculus humanus
corporis]
gi|363805525|sp|E0VI98.1|RU1C_PEDHC RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|212509775|gb|EEB13104.1| U1 small nuclear ribonucleoprotein C, putative [Pediculus humanus
corporis]
Length = 173
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/81 (90%), Positives = 77/81 (95%), Gaps = 1/81 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNL 81
KIA NPF K GAAIPPP+N+
Sbjct: 61 KIA-NPFAPKPGAAIPPPANM 80
>gi|19577373|emb|CAD27755.1| putative sRNP [Anopheles gambiae]
Length = 151
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 90/121 (74%), Gaps = 15/121 (12%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAYKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KIA NPF A PP N+S PPP M P PGM+PGM PG ++MG
Sbjct: 61 KIAPNPF-----TAGPPKPNISI--------PPPTMNMPPRPGMIPGM--PGAPPLLMGP 105
Query: 121 N 121
N
Sbjct: 106 N 106
>gi|170070053|ref|XP_001869448.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
gi|167865897|gb|EDS29280.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
Length = 145
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 90/123 (73%), Gaps = 16/123 (13%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWME+QAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEQQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KI NPF A PP N++ PPPGM PGMMPGM P +MMG
Sbjct: 61 KIQQNPF-----TAGPPKPNVTI--------PPPGMGMAARPGMMPGMQQPP---LMMGA 104
Query: 121 NPG 123
NPG
Sbjct: 105 NPG 107
>gi|363805511|sp|E3X5D6.1|RU1C_ANODA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|312375503|gb|EFR22865.1| hypothetical protein AND_14095 [Anopheles darlingi]
Length = 151
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 90/121 (74%), Gaps = 14/121 (11%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAYKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KIA NPF A PP N+S PPP M P PG++PG MP G ++MG
Sbjct: 61 KIAQNPF-----TAGPPKPNISI--------PPPTMNMPPRPGIIPG-MPAGAPPLLMGP 106
Query: 121 N 121
N
Sbjct: 107 N 107
>gi|58395833|ref|XP_321527.2| AGAP001584-PA [Anopheles gambiae str. PEST]
gi|122064007|sp|Q7PXU6.2|RU1C_ANOGA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|55233767|gb|EAA00983.2| AGAP001584-PA [Anopheles gambiae str. PEST]
Length = 152
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 90/121 (74%), Gaps = 14/121 (11%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAYKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KIA NPF A PP N+S PPP M P PGM+PG MP G ++MG
Sbjct: 61 KIAPNPF-----TAGPPKPNISI--------PPPTMNMPPRPGMIPG-MPAGAPPLLMGP 106
Query: 121 N 121
N
Sbjct: 107 N 107
>gi|357625180|gb|EHJ75707.1| hypothetical protein KGM_20795 [Danaus plexippus]
Length = 167
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 75/84 (89%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSL 84
KIA NPFG GA IPPP + S +
Sbjct: 61 KIAQNPFGGPKGANIPPPWDPSVM 84
>gi|110758091|ref|XP_001120253.1| PREDICTED: hypothetical protein LOC725416 [Apis mellifera]
gi|340720371|ref|XP_003398614.1| PREDICTED: hypothetical protein LOC100646869 [Bombus terrestris]
gi|350398112|ref|XP_003485091.1| PREDICTED: hypothetical protein LOC100744638 [Bombus impatiens]
gi|380018123|ref|XP_003692985.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Apis
florea]
gi|383847483|ref|XP_003699382.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Megachile
rotundata]
Length = 170
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 71/75 (94%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVK++YQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAI 75
KIA+NPF GAAI
Sbjct: 61 KIASNPFAANKGAAI 75
>gi|195453368|ref|XP_002073758.1| GK12970 [Drosophila willistoni]
gi|194169843|gb|EDW84744.1| GK12970 [Drosophila willistoni]
Length = 146
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 80/94 (85%), Gaps = 2/94 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPP 94
KI NNPF + AA P P+ +S +PP +G PP
Sbjct: 61 KITNNPFASGPTAAPPKPAGVS--IPPPNMGAPP 92
>gi|157136350|ref|XP_001663716.1| hypothetical protein AaeL_AAEL013527 [Aedes aegypti]
gi|108869989|gb|EAT34214.1| AAEL013527-PB [Aedes aegypti]
Length = 144
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 83/108 (76%), Gaps = 13/108 (12%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGM 108
KIA NPF +A PP N++ PPP M PGM+PGM
Sbjct: 61 KIAQNPF-----SAGPPKPNVAI--------PPPSMGMPARPGMIPGM 95
>gi|217330625|ref|NP_001136101.1| small nuclear ribonucleoprotein polypeptide C [Nasonia
vitripennis]
Length = 171
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 71/75 (94%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVK++YQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKYFYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAI 75
KIA+NPF GAAI
Sbjct: 61 KIASNPFAPNKGAAI 75
>gi|157136352|ref|XP_001663717.1| hypothetical protein AaeL_AAEL013527 [Aedes aegypti]
gi|122104823|sp|Q16IW3.1|RU1C_AEDAE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|108869990|gb|EAT34215.1| AAEL013527-PA [Aedes aegypti]
Length = 154
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 83/108 (76%), Gaps = 13/108 (12%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGM 108
KIA NPF +A PP N++ PPP M PGM+PGM
Sbjct: 61 KIAQNPF-----SAGPPKPNVAI--------PPPSMGMPARPGMIPGM 95
>gi|195112875|ref|XP_002000997.1| GI22226 [Drosophila mojavensis]
gi|193917591|gb|EDW16458.1| GI22226 [Drosophila mojavensis]
Length = 144
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 75/85 (88%), Gaps = 6/85 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPF-----GNK-GGAAIPPPS 79
KI NNPF GNK G +IPPP+
Sbjct: 61 KITNNPFAGPAPGNKPAGVSIPPPN 85
>gi|125775241|ref|XP_001358872.1| GA18892 [Drosophila pseudoobscura pseudoobscura]
gi|195144768|ref|XP_002013368.1| GL24104 [Drosophila persimilis]
gi|121990949|sp|Q298E0.1|RU1C_DROPS RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|54638613|gb|EAL28015.1| GA18892 [Drosophila pseudoobscura pseudoobscura]
gi|194102311|gb|EDW24354.1| GL24104 [Drosophila persimilis]
Length = 146
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVG 91
KI NNPF +A P PS +S +PP +G
Sbjct: 61 KITNNPFAGGPSSAPPKPSGVS--IPPPNMG 89
>gi|346464873|gb|AEO32281.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 78/98 (79%), Gaps = 9/98 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHK+NVKFYYQKWMEEQAQNLIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLIDATTAAFKAG 60
Query: 61 KIANNPFGNK--GGAAIPPPSNLSSLMPPRQVGPPPGM 96
KI ++ F K GA IPPP+ L Q GPP M
Sbjct: 61 KIQSSQFQAKPLTGAMIPPPAAL-------QPGPPARM 91
>gi|427786831|gb|JAA58867.1| Putative u1 snrnp-specific protein c [Rhipicephalus pulchellus]
Length = 164
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHK+NVKFYYQKWMEEQAQNLIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLIDATTAAFKAG 60
Query: 61 KIANNPFGNK--GGAAIPPPSNL 81
KI ++ F K GA IPPP+ L
Sbjct: 61 KIQSSQFQAKPLTGAMIPPPAAL 83
>gi|195054176|ref|XP_001994002.1| GH22525 [Drosophila grimshawi]
gi|195080474|ref|XP_001997274.1| GH23369 [Drosophila grimshawi]
gi|193895872|gb|EDV94738.1| GH22525 [Drosophila grimshawi]
gi|193905972|gb|EDW04839.1| GH23369 [Drosophila grimshawi]
Length = 144
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 72/85 (84%), Gaps = 6/85 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPF------GNKGGAAIPPPS 79
KI NNPF G G IPPP+
Sbjct: 61 KITNNPFAGPSPGGKPSGVNIPPPN 85
>gi|170034282|ref|XP_001845003.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
gi|167875636|gb|EDS39019.1| U1 small nuclear ribonucleoprotein C [Culex quinquefasciatus]
Length = 138
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 78/105 (74%), Gaps = 8/105 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKHKDNVKFYYQKWME QAQ+LIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMETQAQHLIDATTAAYKAG 60
Query: 61 KIANNPFG----NKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPP 101
KI NPF AIPPP+ PP PGMQQ PP
Sbjct: 61 KIQQNPFTVGPPKPPNVAIPPPNMGIPTRPPMI----PGMQQQPP 101
>gi|195391204|ref|XP_002054253.1| GJ24347 [Drosophila virilis]
gi|194152339|gb|EDW67773.1| GJ24347 [Drosophila virilis]
Length = 144
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 93/131 (70%), Gaps = 17/131 (12%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KI NNPF G A P+ +S PPP M P PGM P MPP M M M
Sbjct: 61 KITNNPFA--GPAPGNKPTGVSI--------PPPNMGAPPRPGM-PN-MPPYMQPM---M 105
Query: 121 NPGM--MGMRP 129
NP M G+RP
Sbjct: 106 NPLMAPTGIRP 116
>gi|194900072|ref|XP_001979581.1| GG16240 [Drosophila erecta]
gi|190651284|gb|EDV48539.1| GG16240 [Drosophila erecta]
Length = 145
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 86/123 (69%), Gaps = 10/123 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGM-QQGPPPGMMPGMMPPGMNMMMMG 119
KI NNPF G A P+ +S PPP M P MPP MN MMG
Sbjct: 61 KITNNPFAGGPGGAPQKPAGVSI--------PPPNMGAPPRPGMPGMPYMPPLMN-PMMG 111
Query: 120 MNP 122
M P
Sbjct: 112 MRP 114
>gi|443731135|gb|ELU16372.1| hypothetical protein CAPTEDRAFT_227784 [Capitella teleta]
Length = 144
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKY+CDYCDT+LTHDSPSVRKTHC GRKHKDNV+ YYQKW+E+Q Q L+D TTAA+KAG
Sbjct: 1 MPKYFCDYCDTFLTHDSPSVRKTHCNGRKHKDNVRDYYQKWLEDQVQKLVDDTTAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLS 82
KI NNPF + GGAAIPPP++L+
Sbjct: 61 KIQNNPF-SAGGAAIPPPASLA 81
>gi|241640727|ref|XP_002410902.1| U1 small nuclear ribonucleoprotein C, putative [Ixodes
scapularis]
gi|363805519|sp|B7Q2M2.1|RU1C_IXOSC RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|215503600|gb|EEC13094.1| U1 small nuclear ribonucleoprotein C, putative [Ixodes
scapularis]
Length = 150
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 2/81 (2%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+YYCDYCDTYLTHDSPSVRKTHC GRKHK+NVKFYYQKWMEEQAQNLIDATTAA+KAGKI
Sbjct: 11 RYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKFYYQKWMEEQAQNLIDATTAAFKAGKI 70
Query: 63 ANNPFGNK--GGAAIPPPSNL 81
++ + NK GA IPPP+ L
Sbjct: 71 QSSQYQNKPISGAMIPPPAAL 91
>gi|193594149|ref|XP_001943959.1| PREDICTED: hypothetical protein LOC100159876 [Acyrthosiphon
pisum]
Length = 146
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 75/97 (77%), Gaps = 10/97 (10%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSL----MPPRQVGPP 93
KI G IPPP+ S MPP + PP
Sbjct: 61 KIGMK------GVCIPPPNMGQSAPQMSMPPGSIMPP 91
>gi|239792749|dbj|BAH72680.1| ACYPI001217 [Acyrthosiphon pisum]
Length = 146
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 75/97 (77%), Gaps = 10/97 (10%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSS----LMPPRQVGPP 93
KI G IPPP+ S MPP + PP
Sbjct: 61 KIGMK------GVCIPPPNMGQSAPQMYMPPGSIMPP 91
>gi|260805050|ref|XP_002597400.1| hypothetical protein BRAFLDRAFT_69314 [Branchiostoma floridae]
gi|363805513|sp|C3Z1P5.1|RU1C_BRAFL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|229282665|gb|EEN53412.1| hypothetical protein BRAFLDRAFT_69314 [Branchiostoma floridae]
Length = 221
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 7/90 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKY+CDYCDTYLTHDSPSVRKTHC GRKHK+NV+ YYQKWMEEQAQ LID TTAA++AG
Sbjct: 1 MPKYFCDYCDTYLTHDSPSVRKTHCNGRKHKENVRVYYQKWMEEQAQQLIDQTTAAFQAG 60
Query: 61 KIANNPF-------GNKGGAAIPPPSNLSS 83
KI NNPF GN+ GA + PP+ L +
Sbjct: 61 KIPNNPFPNAAGQVGNEPGAKVLPPAILQA 90
>gi|194764807|ref|XP_001964520.1| GF23008 [Drosophila ananassae]
gi|190614792|gb|EDV30316.1| GF23008 [Drosophila ananassae]
Length = 147
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/65 (92%), Positives = 63/65 (96%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANN 65
KI NN
Sbjct: 61 KITNN 65
>gi|24648101|ref|NP_650767.1| small ribonucleoprotein particle U1 subunit C [Drosophila
melanogaster]
gi|195356988|ref|XP_002044904.1| GM13647 [Drosophila sechellia]
gi|195497814|ref|XP_002096260.1| GE25158 [Drosophila yakuba]
gi|195569781|ref|XP_002102887.1| GD20140 [Drosophila simulans]
gi|74947819|sp|Q9VE17.1|RU1C_DROME RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|7300460|gb|AAF55616.1| small ribonucleoprotein particle U1 subunit C [Drosophila
melanogaster]
gi|28316881|gb|AAO39463.1| RH29440p [Drosophila melanogaster]
gi|194123797|gb|EDW45840.1| GM13647 [Drosophila sechellia]
gi|194182361|gb|EDW95972.1| GE25158 [Drosophila yakuba]
gi|194198814|gb|EDX12390.1| GD20140 [Drosophila simulans]
gi|220949292|gb|ACL87189.1| snRNP-U1-PA [synthetic construct]
gi|220958498|gb|ACL91792.1| snRNP-U1-PA [synthetic construct]
Length = 145
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/65 (92%), Positives = 63/65 (96%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GRKH+DNVKFYYQKWMEEQAQ+LIDATTAA+KAG
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAG 60
Query: 61 KIANN 65
KI NN
Sbjct: 61 KITNN 65
>gi|115738273|ref|XP_789197.2| PREDICTED: uncharacterized protein LOC584236 [Strongylocentrotus
purpuratus]
Length = 367
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 62/66 (93%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+YYCDYCDTYLTHDSPSVRKTHC GRKHK+NV+ YYQKWMEEQAQ+LID TTAA++AGKI
Sbjct: 222 RYYCDYCDTYLTHDSPSVRKTHCNGRKHKENVRIYYQKWMEEQAQSLIDKTTAAFQAGKI 281
Query: 63 ANNPFG 68
A+NPF
Sbjct: 282 AHNPFS 287
>gi|67971420|dbj|BAE02052.1| unnamed protein product [Macaca fascicularis]
Length = 198
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|358342032|dbj|GAA49587.1| U1 small nuclear ribonucleoprotein C [Clonorchis sinensis]
Length = 714
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 74/110 (67%), Gaps = 8/110 (7%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+YYCDYCDTYLTHDSPSVRKTHC GR HKDNV+ YYQKW+EEQ Q L+D T+ AYK GK+
Sbjct: 372 RYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVRDYYQKWLEEQVQKLVDHTSEAYKQGKM 431
Query: 63 ANNPFGNKGGAAIPPPSNLSSLMPPR--QVGPPPGMQQGPPPGMMPGMMP 110
FG+ G +PPP PPR V PPG +GP P + P P
Sbjct: 432 PPPLFGSPLG--MPPP---GLAYPPRFPPVAVPPGY-RGPTPMVPPQAHP 475
>gi|297677907|ref|XP_002816827.1| PREDICTED: U1 small nuclear ribonucleoprotein C, partial [Pongo
abelii]
Length = 83
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI--ANNPFGNKGGAAIPPPSNL 81
KI GA IPPP +L
Sbjct: 61 KIPPTPFSAPPPAGAMIPPPPSL 83
>gi|297290639|ref|XP_001111611.2| PREDICTED: hypothetical protein LOC718654 [Macaca mulatta]
Length = 213
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 55 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 114
Query: 61 KI 62
KI
Sbjct: 115 KI 116
>gi|402866738|ref|XP_003897532.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Papio anubis]
Length = 213
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 55 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 114
Query: 61 KI 62
KI
Sbjct: 115 KI 116
>gi|209730778|gb|ACI66258.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
gi|209735108|gb|ACI68423.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 156
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI---ANNPFGNKGGAAIPPPSNLSSLMPPR 88
K+ GGA IPPP NL+ PPR
Sbjct: 61 KMPPTPFPGAPPTGGAMIPPP-NLNG--PPR 88
>gi|209734596|gb|ACI68167.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 158
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 103/171 (60%), Gaps = 29/171 (16%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA+++G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQSG 60
Query: 61 KI--ANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMM 118
KI P G A+ PP N+S PPR PGM+P PP
Sbjct: 61 KIPPTPFPGAPPPGGAMLPPPNISG--PPR-------------PGMLPVPGPPMGGHGPH 105
Query: 119 ----------GMNPGMMGMRPMMGGMGGM-GPMMAMGPMGPMGPMRPPMMQ 158
GM PG GMRP MG M M GP M M P PM +RP M++
Sbjct: 106 MMQMMGPPPHGMMPGGPGMRPPMGHMQMMPGPHM-MRPHRPMMLIRPGMIR 155
>gi|431916846|gb|ELK16606.1| UHRF1-binding protein 1 [Pteropus alecto]
Length = 1654
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 61/87 (70%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI--ANNPFGNKGGAAIPPPSNLSSLM 85
KI GA IPPP +L M
Sbjct: 61 KIPPTPFSAPPPAGAMIPPPPSLRGAM 87
>gi|317418679|emb|CBN80717.1| U1 small nuclear ribonucleoprotein C [Dicentrarchus labrax]
Length = 246
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|395533991|ref|XP_003769032.1| PREDICTED: uncharacterized protein LOC100921353, partial
[Sarcophilus harrisii]
Length = 268
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
++YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 43 RFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 102
Query: 63 --ANNPFGNKGGAAIPPPSNL 81
GGA IPPP +L
Sbjct: 103 PPTPFSAPPPGGAMIPPPPSL 123
>gi|348575940|ref|XP_003473746.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cavia
porcellus]
Length = 198
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 40 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 99
Query: 61 KI 62
KI
Sbjct: 100 KI 101
>gi|339236925|ref|XP_003380017.1| U1 small nuclear ribonucleoprotein C [Trichinella spiralis]
gi|316977239|gb|EFV60367.1| U1 small nuclear ribonucleoprotein C [Trichinella spiralis]
Length = 426
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 80/124 (64%), Gaps = 17/124 (13%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKY+CDYCDT+LTHDSPSVRKTH GRKHK+NV+ YYQ+WME+QAQ L+DAT A+K G
Sbjct: 1 MPKYFCDYCDTHLTHDSPSVRKTHNSGRKHKENVRMYYQQWMEDQAQKLVDATAKAFKEG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGM 120
KI NP G PP + PP M G PGM G+ P GMN + GM
Sbjct: 61 KIPANPI---VGMMRPP------------MIPPGAMVPGSVPGMPVGIPPQGMN--LPGM 103
Query: 121 NPGM 124
PG+
Sbjct: 104 TPGV 107
>gi|391328640|ref|XP_003738794.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Metaseiulus
occidentalis]
Length = 144
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 58/61 (95%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTHC GRKHK+NV+FYYQKW+E+QAQNLID TTAA+K G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHCGGRKHKENVRFYYQKWVEDQAQNLIDQTTAAFKQG 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|432858275|ref|XP_004068879.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Oryzias
latipes]
Length = 146
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|209730930|gb|ACI66334.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
gi|303660658|gb|ADM16002.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 156
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC RKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSDRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI---ANNPFGNKGGAAIPPPSNLSSLMPPR 88
K+ GGA IPPP NL+ PPR
Sbjct: 61 KMPPTPFPGAPPTGGAMIPPP-NLNG--PPR 88
>gi|417408325|gb|JAA50723.1| Putative u1 snrnp-specific protein c, partial [Desmodus rotundus]
Length = 170
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 12 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 71
Query: 61 KI 62
KI
Sbjct: 72 KI 73
>gi|62859983|ref|NP_001016598.1| U1 small nuclear ribonucleoprotein C [Xenopus (Silurana)
tropicalis]
gi|363805534|sp|B0JYS7.1|RU1C_XENTR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|166796116|gb|AAI58896.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
gi|213625522|gb|AAI70789.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
gi|213627726|gb|AAI70783.1| small nuclear ribonucleoprotein polypeptide C [Xenopus (Silurana)
tropicalis]
Length = 159
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|147907144|ref|NP_001084130.1| U1 small nuclear ribonucleoprotein C [Xenopus laevis]
gi|548881|sp|Q03369.1|RU1C_XENLA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|65317|emb|CAA45354.1| snRNP C [Xenopus laevis]
gi|54038654|gb|AAH84206.1| Snrp1c protein [Xenopus laevis]
Length = 159
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|391328711|ref|XP_003738828.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Metaseiulus
occidentalis]
Length = 139
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 59/62 (95%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTHC GRKHK+NV+FYYQKW+E+QAQNLID TTAA+K G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHCGGRKHKENVRFYYQKWVEDQAQNLIDQTTAAFKQG 60
Query: 61 KI 62
K+
Sbjct: 61 KM 62
>gi|297300147|ref|XP_001098767.2| PREDICTED: hypothetical protein LOC710189 [Macaca mulatta]
Length = 159
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|291396656|ref|XP_002714640.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|4507127|ref|NP_003084.1| U1 small nuclear ribonucleoprotein C [Homo sapiens]
gi|298104134|ref|NP_001177132.1| small nuclear ribonucleoprotein polypeptide C [Sus scrofa]
gi|114607004|ref|XP_001171894.1| PREDICTED: U1 small nuclear ribonucleoprotein C isoform 2 [Pan
troglodytes]
gi|149732134|ref|XP_001498478.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Equus
caballus]
gi|291396069|ref|XP_002714665.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
gi|296197957|ref|XP_002746505.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
gi|301757023|ref|XP_002914348.1| PREDICTED: hypothetical protein LOC100467723 [Ailuropoda
melanoleuca]
gi|332259591|ref|XP_003278870.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Nomascus
leucogenys]
gi|344298792|ref|XP_003421075.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Loxodonta
africana]
gi|345778629|ref|XP_532115.3| PREDICTED: U1 small nuclear ribonucleoprotein C [Canis lupus
familiaris]
gi|397474217|ref|XP_003808583.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Pan paniscus]
gi|403261636|ref|XP_003923221.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Saimiri
boliviensis boliviensis]
gi|410958980|ref|XP_003986090.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Felis catus]
gi|426250173|ref|XP_004018812.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Ovis aries]
gi|426352827|ref|XP_004043907.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gorilla gorilla
gorilla]
gi|134093|sp|P09234.1|RU1C_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363548468|sp|Q32PA0.2|RU1C_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805516|sp|E2RGI3.1|RU1C_CANFA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805520|sp|F6TFD9.1|RU1C_MACMU RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|37543|emb|CAA31037.1| unnamed protein product [Homo sapiens]
gi|111305879|gb|AAI21083.1| Small nuclear ribonucleoprotein polypeptide C [Homo sapiens]
gi|111309436|gb|AAI21084.1| Small nuclear ribonucleoprotein polypeptide C [Homo sapiens]
gi|119624202|gb|EAX03797.1| small nuclear ribonucleoprotein polypeptide C, isoform CRA_c
[Homo sapiens]
gi|189065172|dbj|BAG34895.1| unnamed protein product [Homo sapiens]
gi|296474586|tpg|DAA16701.1| TPA: U1 small nuclear ribonucleoprotein C [Bos taurus]
gi|383414233|gb|AFH30330.1| U1 small nuclear ribonucleoprotein C [Macaca mulatta]
gi|384948964|gb|AFI38087.1| U1 small nuclear ribonucleoprotein C [Macaca mulatta]
gi|410223870|gb|JAA09154.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410262982|gb|JAA19457.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410300748|gb|JAA28974.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
gi|410338655|gb|JAA38274.1| small nuclear ribonucleoprotein polypeptide C [Pan troglodytes]
Length = 159
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|224085239|ref|XP_002199189.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Taeniopygia
guttata]
Length = 159
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|148697420|gb|EDL29367.1| mCG5378 [Mus musculus]
Length = 159
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|27545257|ref|NP_775358.1| U1 small nuclear ribonucleoprotein C [Danio rerio]
gi|82177316|sp|Q8JGS0.1|RU1C_DANRE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|20977573|gb|AAM28214.1| U1 small nuclear ribonucleoprotein C [Danio rerio]
gi|60688605|gb|AAH91442.1| Small nuclear ribonucleoprotein polypeptide C [Danio rerio]
gi|182891922|gb|AAI65527.1| Snrpc protein [Danio rerio]
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|380793437|gb|AFE68594.1| U1 small nuclear ribonucleoprotein C, partial [Macaca mulatta]
Length = 128
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|6755596|ref|NP_035562.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|402534511|ref|NP_001257969.1| U1 small nuclear ribonucleoprotein C [Rattus norvegicus]
gi|6094204|sp|Q62241.1|RU1C_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|363805530|sp|D3ZCL3.1|RU1C_RAT RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|1360017|emb|CAA65542.1| U1 snRNP-specific protein C [Mus musculus]
gi|1562574|gb|AAB08894.1| U1 snRNP-specific protein C [Mus musculus]
gi|14198360|gb|AAH08243.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|62204138|gb|AAH92266.1| U1 small nuclear ribonucleoprotein C [Mus musculus]
gi|74209391|dbj|BAE23273.1| unnamed protein product [Mus musculus]
gi|74223289|dbj|BAE40776.1| unnamed protein product [Mus musculus]
gi|148690604|gb|EDL22551.1| mCG21696 [Mus musculus]
gi|149043452|gb|EDL96903.1| rCG60784 [Rattus norvegicus]
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|334323611|ref|XP_001378181.2| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|327271225|ref|XP_003220388.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Anolis
carolinensis]
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|118102526|ref|XP_418026.2| PREDICTED: U1 small nuclear ribonucleoprotein C [Gallus gallus]
gi|363805517|sp|E1C6F0.1|RU1C_CHICK RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|56756402|gb|AAW26374.1| SJCHGC01443 protein [Schistosoma japonicum]
gi|226471218|emb|CAX70690.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226471220|emb|CAX70691.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488016|emb|CAX75673.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488018|emb|CAX75674.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488020|emb|CAX75675.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
gi|226488022|emb|CAX75676.1| U1 small nuclear ribonucleoprotein C [Schistosoma japonicum]
Length = 132
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GR HKDNVK YYQKW+EEQ Q L+D T+ AYK G
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVKEYYQKWLEEQVQRLVDHTSEAYKQG 60
Query: 61 KIANNPFGNKGGAAIPPPS 79
K+ FG G IPPP+
Sbjct: 61 KMPPPLFGATAG--IPPPA 77
>gi|293351364|ref|XP_001063116.2| PREDICTED: U1 small nuclear ribonucleoprotein C [Rattus
norvegicus]
gi|392331659|ref|XP_003752352.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Rattus
norvegicus]
gi|149052090|gb|EDM03907.1| rCG63495 [Rattus norvegicus]
Length = 159
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCNGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|348532444|ref|XP_003453716.1| PREDICTED: hypothetical protein LOC100701306 [Oreochromis
niloticus]
Length = 149
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|47220764|emb|CAG11833.1| unnamed protein product [Tetraodon nigroviridis]
Length = 147
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|296193910|ref|XP_002744727.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
Length = 159
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|256062496|ref|XP_002570341.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|256087991|ref|XP_002580144.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|227294399|emb|CAY18730.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
gi|238665654|emb|CAZ36383.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
Length = 132
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDTYLTHDSPSVRKTHC GR HKDNVK YYQKW+EEQ Q L+D T+ AYK G
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCGGRNHKDNVKEYYQKWLEEQVQRLVDHTSEAYKQG 60
Query: 61 KIANNPFGNKGGAAIPPP 78
K+ FG A IPPP
Sbjct: 61 KMPPPLFG--AAAGIPPP 76
>gi|410925753|ref|XP_003976344.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Takifugu
rubripes]
Length = 157
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|109111850|ref|XP_001101394.1| PREDICTED: hypothetical protein LOC706270 [Macaca mulatta]
Length = 159
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVR+THC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRRTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|355721051|gb|AES07136.1| small nuclear ribonucleoprotein polypeptide C [Mustela putorius
furo]
Length = 127
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T AA++ G
Sbjct: 10 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTXAAFQQG 69
Query: 61 KI 62
KI
Sbjct: 70 KI 71
>gi|126337551|ref|XP_001378009.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|126342474|ref|XP_001377139.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|395547158|ref|XP_003775156.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Sarcophilus
harrisii]
Length = 138
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 59/68 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NV+ YYQKWMEEQAQ+LID TT A++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWMEEQAQSLIDKTTTAFQQG 60
Query: 61 KIANNPFG 68
+I N F
Sbjct: 61 RIPPNLFS 68
>gi|178847389|pdb|2VRD|A Chain A, The Structure Of The Zinc Finger From The Human
Spliceosomal Protein U1c
Length = 61
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|126325547|ref|XP_001362328.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
gi|363805521|sp|F7ARS3.1|RU1C_MONDO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 138
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 59/68 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NV+ YYQKWMEEQAQ+LID TT A++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWMEEQAQSLIDKTTTAFQQG 60
Query: 61 KIANNPFG 68
+I N F
Sbjct: 61 RIPPNLFS 68
>gi|115496404|ref|NP_001069802.1| U1 small nuclear ribonucleoprotein C [Bos taurus]
gi|79160256|gb|AAI08202.1| Small nuclear ribonucleoprotein polypeptide C [Bos taurus]
Length = 159
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKLYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|259089482|ref|NP_001158541.1| U1 small nuclear ribonucleoprotein C [Oncorhynchus mykiss]
gi|225704718|gb|ACO08205.1| U1 small nuclear ribonucleoprotein C [Oncorhynchus mykiss]
Length = 157
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 66/82 (80%), Gaps = 3/82 (3%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI---ANNPFGNKGGAAIPPPS 79
K+ GGA IPPP+
Sbjct: 61 KMPPTPFPGAPPPGGAMIPPPN 82
>gi|432109719|gb|ELK33778.1| U1 small nuclear ribonucleoprotein C [Myotis davidii]
Length = 108
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
+ ++YCDYCDTYLTHDSPSVRKTHC GRKHK+NV+ Y QKWMEEQAQ+LID TTAA++ G
Sbjct: 18 LSRFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVEDYCQKWMEEQAQSLIDKTTAAFQQG 77
Query: 61 KI--ANNPFGNKGGAAIPPPSNLSSLM 85
KI GA IPPP +L +
Sbjct: 78 KIPPTPFSAPPPAGAMIPPPPSLRKFI 104
>gi|291387106|ref|XP_002710123.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T AA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTAAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|359320012|ref|XP_003639232.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Canis lupus
familiaris]
Length = 159
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TT A++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTTAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|332226582|ref|XP_003262469.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Nomascus
leucogenys]
Length = 159
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 58/62 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+N+K YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENMKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|209732846|gb|ACI67292.1| U1 small nuclear ribonucleoprotein C [Salmo salar]
Length = 157
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 66/82 (80%), Gaps = 3/82 (3%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI---ANNPFGNKGGAAIPPPS 79
K+ GGA IPPP+
Sbjct: 61 KMPPTPFPGAPPPGGAMIPPPN 82
>gi|225734048|pdb|3CW1|L Chain L, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734057|pdb|3CW1|9 Chain 9, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734066|pdb|3CW1|0 Chain 0, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734075|pdb|3CW1|LL Chain l, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 77
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YY KWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYCKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|114145435|ref|NP_001041454.1| U1 small nuclear ribonucleoprotein C [Ciona intestinalis]
gi|121961656|sp|Q1RLC9.1|RU1C_CIOIN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|93003106|tpd|FAA00136.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 122
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 56/64 (87%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKY+CDYCDTYLTHDSPSVRKTHC GRKHKDNVK YYQ WMEEQAQ LID TT A++ G
Sbjct: 1 MPKYFCDYCDTYLTHDSPSVRKTHCSGRKHKDNVKMYYQTWMEEQAQELIDKTTQAFQKG 60
Query: 61 KIAN 64
K+ N
Sbjct: 61 KMGN 64
>gi|126335848|ref|XP_001374016.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Monodelphis
domestica]
Length = 138
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 59/68 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NV+ YYQKW+EEQAQ+LID TT A++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWIEEQAQSLIDKTTTAFQQG 60
Query: 61 KIANNPFG 68
+I N F
Sbjct: 61 RIPPNLFS 68
>gi|354488386|ref|XP_003506351.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cricetulus
griseus]
Length = 271
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 55/59 (93%)
Query: 4 YYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 116 FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 174
>gi|395817005|ref|XP_003781969.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform 1
[Otolemur garnettii]
gi|395817007|ref|XP_003781970.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform 2
[Otolemur garnettii]
Length = 159
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLT DSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTRDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|261860622|dbj|BAI46833.1| small nuclear ribonucleoprotein polypeptide C [synthetic
construct]
Length = 180
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
+ ++YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 22 LFRFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 81
Query: 61 KI 62
KI
Sbjct: 82 KI 83
>gi|62897757|dbj|BAD96818.1| small nuclear ribonucleoprotein polypeptide C variant [Homo
sapiens]
Length = 159
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKH++N K YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHRENEKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|395832600|ref|XP_003804122.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C [Otolemur garnettii]
Length = 247
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 54/58 (93%)
Query: 5 YCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 93 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 150
>gi|326933859|ref|XP_003213016.1| PREDICTED: u1 small nuclear ribonucleoprotein C-like [Meleagris
gallopavo]
Length = 158
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
>gi|449267025|gb|EMC78001.1| U1 small nuclear ribonucleoprotein C, partial [Columba livia]
Length = 157
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
++YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 1 RFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 60
>gi|291405007|ref|XP_002718945.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C
[Oryctolagus cuniculus]
Length = 159
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 56/62 (90%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCD CDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LI TTAA++ G
Sbjct: 1 MPKFYCDCCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIHKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|296189227|ref|XP_002742697.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Callithrix
jacchus]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 56/62 (90%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+Y DYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T AA++ G
Sbjct: 1 MPKFYYDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTVAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|156375087|ref|XP_001629914.1| predicted protein [Nematostella vectensis]
gi|363805523|sp|A7SEP9.1|RU1C_NEMVE RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|156216924|gb|EDO37851.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 55/59 (93%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+FYYQKWMEEQAQ LID TTAA+++
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNNGRKHKENVRFYYQKWMEEQAQTLIDQTTAAFQS 59
>gi|119624201|gb|EAX03796.1| small nuclear ribonucleoprotein polypeptide C, isoform CRA_b
[Homo sapiens]
Length = 181
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 54/58 (93%)
Query: 5 YCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 27 YCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 84
>gi|119616180|gb|EAW95774.1| hCG1758872 [Homo sapiens]
Length = 155
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 57/62 (91%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYC+TYLTHDSP VRKTHC GRKHK+NVK YYQKWM+EQAQ+LID TTAA++ G
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|324519813|gb|ADY47485.1| U1 small nuclear ribonucleoprotein C [Ascaris suum]
Length = 138
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+ +YQKWMEEQAQ L+DATT A+ G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVDATTKAFTQG 60
Query: 61 KI 62
+I
Sbjct: 61 RI 62
>gi|321478476|gb|EFX89433.1| hypothetical protein DAPPUDRAFT_40364 [Daphnia pulex]
Length = 63
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATT 54
+YYCDYCDTYLTHDSPSVRKTHC GRKHK+NVKFYYQKWME+QAQ+LIDAT+
Sbjct: 1 RYYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKFYYQKWMEDQAQSLIDATS 52
>gi|324523192|gb|ADY48208.1| U1 small nuclear ribonucleoprotein C [Ascaris suum]
Length = 126
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAY--K 58
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+ +YQKWMEEQAQ L+DAT AY +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRIFYQKWMEEQAQKLVDATAKAYLQQ 60
Query: 59 AGKIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGM 104
+I KG P SN ++M + P + + P P
Sbjct: 61 KARIEATRALQKGM----PGSNAEAMMTSVETQMMPTLMRFPRPSF 102
>gi|281338444|gb|EFB14028.1| hypothetical protein PANDA_002243 [Ailuropoda melanoleuca]
Length = 131
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 51/55 (92%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTA 55
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T A
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTRA 55
>gi|402590067|gb|EJW83998.1| U1 zinc finger protein [Wuchereria bancrofti]
Length = 128
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+ +YQKWMEEQAQ L+DAT A+ G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVDATARAFTQG 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPP 87
++ G+ GAA P +S PP
Sbjct: 61 RM-----GSSQGAAPRMPMAVSGPRPP 82
>gi|312082852|ref|XP_003143616.1| hypothetical protein LOAG_08036 [Loa loa]
gi|307761219|gb|EFO20453.1| hypothetical protein LOAG_08036 [Loa loa]
Length = 128
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+ +YQKWMEEQAQ L+DAT A+ G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVDATARAFTQG 60
Query: 61 KIANN 65
++ ++
Sbjct: 61 RMGSS 65
>gi|170587258|ref|XP_001898395.1| U1 zinc finger [Brugia malayi]
gi|158594221|gb|EDP32807.1| U1 zinc finger [Brugia malayi]
Length = 128
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHK+NV+ +YQKWMEEQAQ L+DAT A+ G
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKENVRMFYQKWMEEQAQKLVDATARAFTQG 60
Query: 61 KIANN 65
++ ++
Sbjct: 61 RMGSS 65
>gi|297294570|ref|XP_002804466.1| PREDICTED: hypothetical protein LOC100430762 [Macaca mulatta]
Length = 159
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK YCDYC+TYLTHDSPSV KTH GRKHK+NVK YYQKWMEEQAQ+LID TTAA++ G
Sbjct: 1 MPKSYCDYCNTYLTHDSPSVGKTHHSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|431908982|gb|ELK12573.1| U1 small nuclear ribonucleoprotein C [Pteropus alecto]
Length = 136
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 53/61 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M K+YCDYCDTYLTHD PSVRKTHC GR+HK+NVK YYQK +EEQAQ+LI+ TT A++ G
Sbjct: 42 MLKFYCDYCDTYLTHDPPSVRKTHCNGRRHKENVKVYYQKRIEEQAQSLIEKTTVAFQQG 101
Query: 61 K 61
K
Sbjct: 102 K 102
>gi|351704048|gb|EHB06967.1| UHRF1-binding protein 1 [Heterocephalus glaber]
Length = 1596
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/54 (87%), Positives = 51/54 (94%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATT 54
MPK+YCDYCDTYLTHDSPSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTS 54
>gi|308470268|ref|XP_003097368.1| hypothetical protein CRE_16270 [Caenorhabditis remanei]
gi|308240217|gb|EFO84169.1| hypothetical protein CRE_16270 [Caenorhabditis remanei]
Length = 142
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHKDNV+ +YQKWME+QAQ L+D T A+
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAFATN 60
Query: 61 KIANN-PFGNKGGAAIPP 77
++ P G A IPP
Sbjct: 61 RMQGAVPRTTMGMAPIPP 78
>gi|291232342|ref|XP_002736116.1| PREDICTED: small nuclear ribonucleoprotein polypeptide C-like,
partial [Saccoglossus kowalevskii]
Length = 107
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
Query: 18 PSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKIANNPFGNKG-----G 72
PSVRKTHCQGRKHK+NVK YYQKWMEEQAQNLID TTAA++AGKIA NPF N G
Sbjct: 1 PSVRKTHCQGRKHKENVKIYYQKWMEEQAQNLIDQTTAAFQAGKIAQNPFPNASGPPPRG 60
Query: 73 AAIPPPSNLS 82
IPPP+N S
Sbjct: 61 TMIPPPTNYS 70
>gi|268553375|ref|XP_002634673.1| Hypothetical protein CBG19656 [Caenorhabditis briggsae]
gi|363805514|sp|A8XW44.1|RU1C_CAEBR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 142
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHKDNV+ +YQKWME+QAQ L+D T A+
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAFATN 60
Query: 61 KIANN-PFGNKGGAAIPP 77
++ P G A +PP
Sbjct: 61 RMHGAVPRTTMGMAPVPP 78
>gi|341877918|gb|EGT33853.1| hypothetical protein CAEBREN_07221 [Caenorhabditis brenneri]
gi|341896000|gb|EGT51935.1| hypothetical protein CAEBREN_11652 [Caenorhabditis brenneri]
Length = 142
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHKDNV+ +YQKWME+QAQ L+D T A+
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAFATN 60
Query: 61 KI 62
++
Sbjct: 61 RM 62
>gi|217330628|ref|NP_001136102.1| small nuclear ribonucleoprotein polypeptide C-like [Nasonia
vitripennis]
Length = 117
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYC+YCDTYL +DSP+V TH QGRKHKDNV YYQKW+EE+ Q +ID TAA+KAG
Sbjct: 1 MPKYYCEYCDTYLANDSPTVTDTHRQGRKHKDNVTNYYQKWLEEKTQKMIDEATAAFKAG 60
Query: 61 KIANNPFGNKGGAAIPPPS 79
KI +K + P PS
Sbjct: 61 KIV----SDKNTTSSPLPS 75
>gi|17539712|ref|NP_501490.1| Protein F08B4.7 [Caenorhabditis elegans]
gi|74961216|sp|P90815.1|RU1C_CAEEL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|351060028|emb|CCD67653.1| Protein F08B4.7 [Caenorhabditis elegans]
Length = 142
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCDT+LTHDSPSVRKTH GRKHKDNV+ +YQKWME+QAQ L+D T A+
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAFATN 60
Query: 61 KIANN-PFGNKGGAAIPP 77
++ P G A +PP
Sbjct: 61 RMQGAVPRTTMGMAPVPP 78
>gi|109511276|ref|XP_001067425.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Rattus
norvegicus]
gi|293351240|ref|XP_002727732.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Rattus
norvegicus]
Length = 159
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 52/62 (83%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M K Y D CDTYLTHDSPSVRKTHC G+KHK+NVK YYQKWMEEQAQ+L D TTA ++ G
Sbjct: 1 MLKVYWDDCDTYLTHDSPSVRKTHCSGQKHKENVKEYYQKWMEEQAQSLTDKTTAVFQQG 60
Query: 61 KI 62
KI
Sbjct: 61 KI 62
>gi|148668213|gb|EDL00543.1| mCG1042514 [Mus musculus]
Length = 159
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YC YCD YLTH+SPS+RKTHC GRKHK+NVK QKWMEEQ Q LID TA ++ G
Sbjct: 1 MPKFYCYYCDMYLTHNSPSMRKTHCSGRKHKENVKENCQKWMEEQVQTLIDKPTATFQQG 60
Query: 61 KIANNPFGNK--GGAAIPPPSNLSSLMPPRQVG 91
KI PF GA IP L SL+ P + G
Sbjct: 61 KIPPVPFSGSLPAGAMIP---QLPSLLDPPRSG 90
>gi|405957104|gb|EKC23338.1| U1 small nuclear ribonucleoprotein C [Crassostrea gigas]
Length = 171
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Query: 14 THDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKIANNPF--GNKG 71
+ + PSVRKTHC GRKHK+NV+ YYQKW+EEQ Q L+D TTAA+KAGKIA+NPF G G
Sbjct: 36 SDEYPSVRKTHCNGRKHKENVRLYYQKWLEEQVQKLVDDTTAAFKAGKIASNPFQSGAPG 95
Query: 72 GAAIPPPS 79
GA IPPP+
Sbjct: 96 GAMIPPPA 103
>gi|346467509|gb|AEO33599.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID--------A 52
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 63 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 122
Query: 53 TTAAYKAGKIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPG 112
A ++ G N + G P L L PP + P QGP P ++PGM PP
Sbjct: 123 AAAFHQVGATFNQHLMSLQGNPQRP--RLPILAPP--IFPMGASPQGPIPSLLPGMRPPV 178
Query: 113 MNMMMMGM 120
+ + M G+
Sbjct: 179 LPVPMAGV 186
>gi|341886138|gb|EGT42073.1| hypothetical protein CAEBREN_06165 [Caenorhabditis brenneri]
Length = 151
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD +LTHDS RKTH +GR+HKDNV+ +YQKW+E QAQ L+D T A+ A
Sbjct: 1 MPKYYCDYCDAFLTHDSLKGRKTHNEGRRHKDNVRGFYQKWLEAQAQKLVDNTARAFTAQ 60
Query: 61 KI 62
++
Sbjct: 61 RM 62
>gi|449462314|ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus]
gi|449491514|ref|XP_004158922.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus]
Length = 197
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID +
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGM 113
A F G A +L P V P P M G PG+MPG+ PP +
Sbjct: 61 AAA---FQQVGAAFN---QHLLGQRPRLPVLPTPVM-PGAAPGLMPGIRPPVL 106
>gi|308462127|ref|XP_003093349.1| hypothetical protein CRE_30184 [Caenorhabditis remanei]
gi|308250298|gb|EFO94250.1| hypothetical protein CRE_30184 [Caenorhabditis remanei]
Length = 208
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD +LTHDS RKTH +GRKHKD V+ +YQKW+E QAQ ++D T A++
Sbjct: 82 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLESQAQKMVDQTAQAFQQN 141
Query: 61 KI 62
++
Sbjct: 142 RM 143
>gi|294460061|gb|ADE75613.1| unknown [Picea sitchensis]
Length = 244
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID +
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQ 60
Query: 61 KIANNPFGNKGGAAI 75
A F + GAA
Sbjct: 61 TAA---FQQQVGAAF 72
>gi|308462125|ref|XP_003093348.1| hypothetical protein CRE_30173 [Caenorhabditis remanei]
gi|308250297|gb|EFO94249.1| hypothetical protein CRE_30173 [Caenorhabditis remanei]
Length = 127
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD +LTHDS RKTH +GRKHKD V+ +YQKW+E QAQ ++D T A++
Sbjct: 1 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLEAQAQKMVDQTAQAFQQN 60
Query: 61 KI 62
++
Sbjct: 61 RM 62
>gi|115445447|ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|50251962|dbj|BAD27897.1| putative u1 small nuclear ribonucleoprotein C [Oryza sativa
Japonica Group]
gi|113536034|dbj|BAF08417.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|125581580|gb|EAZ22511.1| hypothetical protein OsJ_06175 [Oryza sativa Japonica Group]
gi|215686377|dbj|BAG87638.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707035|dbj|BAG93495.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 54 TAAYKAGKIANN 65
AA++ G N
Sbjct: 61 AAAFQVGAPFNQ 72
>gi|242062554|ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
gi|363805509|sp|C5XYW4.1|RU1C2_SORBI RecName: Full=U1 small nuclear ribonucleoprotein C-2; Short=U1
snRNP C-2; Short=U1-C-2; Short=U1C-2
gi|241932397|gb|EES05542.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
Length = 228
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>gi|125538898|gb|EAY85293.1| hypothetical protein OsI_06664 [Oryza sativa Indica Group]
Length = 238
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 54 TAAYKAGKIANN 65
AA++ G N
Sbjct: 61 AAAFQVGAPFNQ 72
>gi|212722338|ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea mays]
gi|194691078|gb|ACF79623.1| unknown [Zea mays]
gi|195658989|gb|ACG48962.1| WW domain-binding protein 11 [Zea mays]
Length = 228
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>gi|225436815|ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 213
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 54 TAAYKAGKIANN 65
TAA++ A N
Sbjct: 61 TAAFQQVGAAYN 72
>gi|242064726|ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
gi|363805507|sp|C5XZK6.1|RU1C1_SORBI RecName: Full=U1 small nuclear ribonucleoprotein C-1; Short=U1
snRNP C-1; Short=U1-C-1; Short=U1C-1
gi|241933483|gb|EES06628.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
Length = 231
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>gi|255559356|ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
gi|223540083|gb|EEF41660.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
Length = 206
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLID 51
>gi|413925917|gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 345
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID +
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 253
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPP--PG--MMPGMMPPGM 113
A + P ++ P + P PGM G P PG +MPG+ PP +
Sbjct: 254 AAAFQAGAPFNQHLLAFPGAMAR--PRLPILPTPGMPHGFPQAPGAPLMPGIRPPAI 308
>gi|296086639|emb|CBI32274.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 54 TAAYKAGKIANN 65
TAA++ A N
Sbjct: 61 TAAFQQVGAAYN 72
>gi|340371949|ref|XP_003384507.1| PREDICTED: hypothetical protein LOC100634011 [Amphimedon
queenslandica]
Length = 138
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNL 49
M KYYCDYCDTYLTHDSPSVRKTH GR+HK+NV+ YY W+E QAQ+
Sbjct: 1 MGKYYCDYCDTYLTHDSPSVRKTHNSGRRHKENVRLYYVNWLESQAQSF 49
>gi|224073782|ref|XP_002304170.1| predicted protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q++ID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIID 51
>gi|297286640|ref|XP_001101734.2| PREDICTED: hypothetical protein LOC712667 [Macaca mulatta]
Length = 160
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+ CD+C+TYLTH PSV HC GRKHK+NVK YYQKWME+QA++L D T A + G
Sbjct: 1 MPKFCCDFCNTYLTHACPSVGTYHCSGRKHKENVKDYYQKWMEQQARSLADRTKTASQQG 60
Query: 61 KI 62
+
Sbjct: 61 RT 62
>gi|413925918|gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 244
>gi|356535539|ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
Length = 206
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>gi|356502842|ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
Length = 206
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>gi|413925919|gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 322
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID +
Sbjct: 194 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 253
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPP--PG--MMPGMMPP 111
A + P ++ P + P PGM G P PG +MPG+ PP
Sbjct: 254 AAAFQAGAPFNQHLLAFPGAMAR--PRLPILPTPGMPHGFPQAPGAPLMPGIRPP 306
>gi|388496966|gb|AFK36549.1| unknown [Lotus japonicus]
Length = 192
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLID 51
>gi|326491215|dbj|BAK05707.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 54 TAAYKAGKIAN 64
AA++ G N
Sbjct: 61 AAAFQVGAPFN 71
>gi|357141531|ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822246 [Brachypodium
distachyon]
Length = 211
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+L+D
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQ 60
Query: 54 TAAYKAGKIANN 65
AA++ G N
Sbjct: 61 AAAFQVGAPFNQ 72
>gi|297813993|ref|XP_002874880.1| hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp.
lyrata]
gi|297320717|gb|EFH51139.1| hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLID 51
>gi|18412147|ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis
thaliana]
gi|75217907|sp|Q56XE4.1|RU1C_ARATH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|62320807|dbj|BAD93742.1| putative C-type U1 snRNP [Arabidopsis thaliana]
gi|332656876|gb|AEE82276.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis
thaliana]
Length = 207
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLID 51
>gi|223942415|gb|ACN25291.1| unknown [Zea mays]
Length = 129
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID +
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPP--PG--MMPGMMPPGM 113
A + P ++ P + P PGM G P PG +MPG+ PP +
Sbjct: 61 AAAFQAGAPFNQHLLAFPGAMAR--PRLPILPTPGMPHGFPQAPGAPLMPGIRPPIL 115
>gi|4262140|gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana]
gi|7270182|emb|CAB77797.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 112
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLID 51
>gi|28466929|gb|AAO44073.1| At4g03120 [Arabidopsis thaliana]
gi|110743941|dbj|BAE99804.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 207
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 44/57 (77%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAY 57
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ Y+Q++ E+Q Q+LID +
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLIDQRIKEH 57
>gi|340923678|gb|EGS18581.1| hypothetical protein CTHT_0051860 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 283
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ TA+Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVIDYYQQISQEKAQSVIDSITASYTAE 60
Query: 61 KIAN 64
+A+
Sbjct: 61 GLAH 64
>gi|440639746|gb|ELR09665.1| hypothetical protein GMDG_04151 [Geomyces destructans 20631-21]
Length = 222
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNTGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ A+NP
Sbjct: 61 GQSASNP 67
>gi|261197263|ref|XP_002625034.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
gi|239595664|gb|EEQ78245.1| conserved hypothetical protein [Ajellomyces dermatitidis
SLH14081]
Length = 246
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAE 60
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 61 GQASSNP 67
>gi|239606653|gb|EEQ83640.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 251
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAE 60
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 61 GQASSNP 67
>gi|429858203|gb|ELA33032.1| u1 small nuclear ribonucleoprotein [Colletotrichum
gloeosporioides Nara gc5]
Length = 193
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NNP
Sbjct: 61 GQAHNNP 67
>gi|392863975|gb|EAS35237.2| hypothetical protein CIMG_00556 [Coccidioides immitis RS]
Length = 240
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ A NP
Sbjct: 61 GQAAANP 67
>gi|336266836|ref|XP_003348185.1| hypothetical protein SMAC_04030 [Sordaria macrospora k-hell]
Length = 201
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|296417462|ref|XP_002838376.1| hypothetical protein [Tuber melanosporum Mel28]
gi|363805532|sp|D5GDH4.1|RU1C_TUBMM RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|295634306|emb|CAZ82567.1| unnamed protein product [Tuber melanosporum]
Length = 220
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSISVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAA 59
>gi|66816575|ref|XP_642297.1| C2H2-type zinc finger-containing protein [Dictyostelium
discoideum AX4]
gi|74856662|sp|Q54YA5.1|RU1C_DICDI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|60470360|gb|EAL68340.1| C2H2-type zinc finger-containing protein [Dictyostelium
discoideum AX4]
Length = 174
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD YLTHDSPSVRK+H G++HK V+ +YQ++ E Q+LI+A Y+
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEES 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|402226556|gb|EJU06616.1| zf-U1-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 193
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H GR H NVK YY ++AQ++ID T AY++G
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLQNVKDYYASLGHDKAQDIIDQITKAYESG 60
>gi|226289874|gb|EEH45358.1| hypothetical protein PADG_01508 [Paracoccidioides brasiliensis
Pb18]
Length = 229
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAE 60
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 61 GQASSNP 67
>gi|302793885|ref|XP_002978707.1| hypothetical protein SELMODRAFT_418544 [Selaginella moellendorffii]
gi|300153516|gb|EFJ20154.1| hypothetical protein SELMODRAFT_418544 [Selaginella moellendorffii]
Length = 675
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 4 YYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q++ID ++
Sbjct: 440 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSIIDQKVKEHQ 494
>gi|380478163|emb|CCF43756.1| glucose N-acetyltransferase 1 [Colletotrichum higginsianum]
Length = 197
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NNP
Sbjct: 61 GQAHNNP 67
>gi|310793702|gb|EFQ29163.1| U1 zinc finger [Glomerella graminicola M1.001]
Length = 197
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NNP
Sbjct: 61 GQAHNNP 67
>gi|350538849|ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
gi|62751087|dbj|BAD95791.1| similar to u1 small nuclear ribonucleoprotein C [Solanum
lycopersicum]
Length = 197
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ + Q+LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLID 51
>gi|390601511|gb|EIN10905.1| zf-U1-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 193
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQN+ID TAAY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQNIIDQITAAYESS 60
>gi|320031630|gb|EFW13590.1| hypothetical protein CPSG_09804 [Coccidioides posadasii str.
Silveira]
Length = 241
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQATANP 67
>gi|196012323|ref|XP_002116024.1| hypothetical protein TRIADDRAFT_9459 [Trichoplax adhaerens]
gi|190581347|gb|EDV21424.1| hypothetical protein TRIADDRAFT_9459 [Trichoplax adhaerens]
Length = 59
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLI 50
+Y+CDYCDT+LTHDSPSVRKTH GRKHKDNV+ YYQ+W +E ++ +
Sbjct: 1 RYFCDYCDTFLTHDSPSVRKTHNSGRKHKDNVRLYYQQWYDENIRDQV 48
>gi|363805627|sp|Q5BBX9.2|RU1C_EMENI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 236
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAVPNP 67
>gi|452983603|gb|EME83361.1| hypothetical protein MYCFIDRAFT_72224 [Pseudocercospora fijiensis
CIRAD86]
Length = 208
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ +ID T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVIDGITSSYAA 59
>gi|302694089|ref|XP_003036723.1| hypothetical protein SCHCODRAFT_83874 [Schizophyllum commune
H4-8]
gi|300110420|gb|EFJ01821.1| hypothetical protein SCHCODRAFT_83874 [Schizophyllum commune
H4-8]
Length = 209
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQN+ID TAAY+
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNNGRNHLANVRDYYASLGHDKAQNIIDQITAAYE 58
>gi|363805630|sp|Q4WQM6.3|RU1C_ASPFU RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
Length = 216
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAA 59
>gi|347833154|emb|CCD48851.1| hypothetical protein [Botryotinia fuckeliana]
Length = 187
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 61 GQSSSNP 67
>gi|380091121|emb|CCC11327.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 222
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 19/105 (18%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNPFGNKGGAAIPPPSNLSSLMPPRQV-GPPPGMQQGPPPG 103
G+ NP ++P Q G PPG+ PPPG
Sbjct: 61 GQAHANP-----------------MLPQNQPGGIPPGLGVFPPPG 88
>gi|167535798|ref|XP_001749572.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771964|gb|EDQ85623.1| predicted protein [Monosiga brevicollis MX1]
Length = 393
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP+YYCDYCD YLTHDSPSVRKTH GRKHK+ V+ +Y KW EE
Sbjct: 1 MPRYYCDYCDAYLTHDSPSVRKTHNGGRKHKEAVRDFYAKWAEE 44
>gi|336364679|gb|EGN93034.1| hypothetical protein SERLA73DRAFT_172391 [Serpula lacrymans var.
lacrymans S7.3]
Length = 200
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQN+ID TAAY+
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLSNVRDYYASLGHDKAQNIIDQITAAYETS 60
>gi|453086668|gb|EMF14710.1| zf-U1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 205
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ +ID T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVIDGITSSYAA 59
>gi|403417354|emb|CCM04054.1| predicted protein [Fibroporia radiculosa]
Length = 241
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 30 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYESS 89
>gi|358395598|gb|EHK44985.1| hypothetical protein TRIATDRAFT_88100 [Trichoderma atroviride IMI
206040]
Length = 194
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|336472579|gb|EGO60739.1| hypothetical protein NEUTE1DRAFT_127544 [Neurospora tetrasperma
FGSC 2508]
gi|350294186|gb|EGZ75271.1| zf-U1-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 216
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|85102947|ref|XP_961427.1| hypothetical protein NCU01341 [Neurospora crassa OR74A]
gi|363805524|sp|Q1K7T5.1|RU1C_NEUCR RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|11595611|emb|CAC18231.1| related to U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C [Neurospora
crassa]
gi|28922972|gb|EAA32191.1| predicted protein [Neurospora crassa OR74A]
Length = 216
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|398398882|ref|XP_003852898.1| hypothetical protein MYCGRDRAFT_104068 [Zymoseptoria tritici
IPO323]
gi|339472780|gb|EGP87874.1| hypothetical protein MYCGRDRAFT_104068 [Zymoseptoria tritici
IPO323]
Length = 204
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ +ID T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVIDGITSSYAA 59
>gi|384245040|gb|EIE18536.1| zf-U1-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 127
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M +YYCDYCDTYLTHDSP VRK H G KHK NV+ YY ++ E Q Q+LID+ ++A
Sbjct: 1 MTRYYCDYCDTYLTHDSPVVRKQHNDGYKHKANVRNYYMQFEESQTQSLIDSKIMEFEAK 60
Query: 61 KIANNPFGNKGGAAI 75
N F + A+
Sbjct: 61 --TRNAFQAQVAASF 73
>gi|402085871|gb|EJT80769.1| hypothetical protein GGTG_00763 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 211
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVIEYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|409079691|gb|EKM80052.1| hypothetical protein AGABI1DRAFT_113282 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198546|gb|EKV48472.1| hypothetical protein AGABI2DRAFT_192075 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNNGRNHLANVRDYYASLGHDKAQSIIDQITAAYES 59
>gi|358389547|gb|EHK27139.1| hypothetical protein TRIVIDRAFT_207688 [Trichoderma virens
Gv29-8]
Length = 194
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|330798431|ref|XP_003287256.1| hypothetical protein DICPUDRAFT_32190 [Dictyostelium purpureum]
gi|325082716|gb|EGC36189.1| hypothetical protein DICPUDRAFT_32190 [Dictyostelium purpureum]
Length = 84
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD YLTHDSPSVRK+H G++HK V+ YYQ++ E Q+LI++ Y+
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLYYQQFEAEFTQSLIESRLKEYEEN 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|392593018|gb|EIW82344.1| zf-U1-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 207
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYES 59
>gi|340522372|gb|EGR52605.1| predicted protein [Trichoderma reesei QM6a]
Length = 218
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|326431941|gb|EGD77511.1| hypothetical protein PTSG_08609 [Salpingoeca sp. ATCC 50818]
Length = 299
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA 46
MP+YYCDYCDT+LTHDSPSVRKTH GRKHKD V YY+ W++E +
Sbjct: 1 MPRYYCDYCDTFLTHDSPSVRKTHNTGRKHKDAVIHYYRTWLDEAS 46
>gi|170111352|ref|XP_001886880.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638238|gb|EDR02517.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 205
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY +QAQ++ID T+AY+
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLSNVRDYYASLGHDQAQSIIDQITSAYET 59
>gi|393228924|gb|EJD36557.1| zf-U1-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 202
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQN+ID T+AY+
Sbjct: 1 MPKHYCDYCDVFLTHDSTSVRKAHNSGRNHLSNVRDYYASLGHDKAQNIIDQITSAYE 58
>gi|452844700|gb|EME46634.1| hypothetical protein DOTSEDRAFT_70596 [Dothistroma septosporum
NZE10]
Length = 199
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ +ID T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQAVIDGITSSYAA 59
>gi|449296075|gb|EMC92095.1| hypothetical protein BAUCODRAFT_53356, partial [Baudoinia
compniacensis UAMH 10762]
Length = 60
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKY+CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKYFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYNAA 60
>gi|430811200|emb|CCJ31294.1| unnamed protein product [Pneumocystis jirovecii]
gi|430812248|emb|CCJ30340.1| unnamed protein product [Pneumocystis jirovecii]
Length = 160
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 4 YYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+YCDYCD +LTHDS SVRK H G+ H NV+ YYQ+ E+AQN+ID+ T AY+ I
Sbjct: 3 HYCDYCDVFLTHDSASVRKAHNAGKNHITNVREYYQEISHEKAQNVIDSITKAYENQSI 61
>gi|389635077|ref|XP_003715191.1| hypothetical protein MGG_08209 [Magnaporthe oryzae 70-15]
gi|351647524|gb|EHA55384.1| hypothetical protein MGG_08209 [Magnaporthe oryzae 70-15]
gi|440468016|gb|ELQ37201.1| hypothetical protein OOU_Y34scaffold00610g38 [Magnaporthe oryzae
Y34]
gi|440487510|gb|ELQ67294.1| hypothetical protein OOW_P131scaffold00323g14 [Magnaporthe oryzae
P131]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVIEYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|449549920|gb|EMD40885.1| hypothetical protein CERSUDRAFT_111466 [Ceriporiopsis
subvermispora B]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID T+AY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITSAYES 59
>gi|171691891|ref|XP_001910870.1| hypothetical protein [Podospora anserina S mat+]
gi|170945894|emb|CAP72695.1| unnamed protein product [Podospora anserina S mat+]
Length = 218
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITNSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|302913091|ref|XP_003050842.1| hypothetical protein NECHADRAFT_80502 [Nectria haematococca mpVI
77-13-4]
gi|363805522|sp|C7YRT4.1|RU1C_NECH7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|256731780|gb|EEU45129.1| hypothetical protein NECHADRAFT_80502 [Nectria haematococca mpVI
77-13-4]
Length = 204
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|408398045|gb|EKJ77181.1| hypothetical protein FPSE_02631 [Fusarium pseudograminearum
CS3096]
Length = 196
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YY++ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYEQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|389744417|gb|EIM85600.1| zf-U1-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD YLTHDS SVRK H GR H NV+ YY ++AQ++ID T+A+++
Sbjct: 1 MPKHYCDYCDVYLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITSAFES 59
>gi|342887514|gb|EGU86996.1| hypothetical protein FOXB_02390 [Fusarium oxysporum Fo5176]
Length = 196
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 60
Query: 60 GKIANNP 66
G+ NP
Sbjct: 61 GQAHANP 67
>gi|409050336|gb|EKM59813.1| hypothetical protein PHACADRAFT_138067 [Phanerochaete carnosa
HHB-10118-sp]
Length = 201
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYESS 60
>gi|393216184|gb|EJD01675.1| zf-U1-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 211
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD YLTHDS SVRK H GR H NV+ YY ++AQ++ID T+AY +
Sbjct: 1 MPKHYCDYCDVYLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITSAYDS 59
>gi|320591751|gb|EFX04190.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 275
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 60 GKIANNP 66
G+ NP
Sbjct: 59 GQAHANP 65
>gi|396465764|ref|XP_003837490.1| hypothetical protein LEMA_P037240.1 [Leptosphaeria maculans JN3]
gi|312214048|emb|CBX94050.1| hypothetical protein LEMA_P037240.1 [Leptosphaeria maculans JN3]
Length = 206
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNTE 60
Query: 61 KIAN 64
AN
Sbjct: 61 GQAN 64
>gi|328850558|gb|EGF99721.1| hypothetical protein MELLADRAFT_118240 [Melampsora
larici-populina 98AG31]
Length = 210
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD +L +SPSVRK H GR H NV+ YY ++AQN+ID T Y++G
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQNIIDEITRMYESG 60
>gi|169606872|ref|XP_001796856.1| hypothetical protein SNOG_06486 [Phaeosphaeria nodorum SN15]
gi|160707098|gb|EAT86317.2| hypothetical protein SNOG_06486 [Phaeosphaeria nodorum SN15]
Length = 127
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 17 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNLE 76
Query: 61 KIAN 64
AN
Sbjct: 77 GQAN 80
>gi|169861668|ref|XP_001837468.1| hypothetical protein CC1G_01380 [Coprinopsis cinerea
okayama7#130]
gi|363805518|sp|A8NYM5.1|RU1C_COPC7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|116501489|gb|EAU84384.1| hypothetical protein CC1G_01380 [Coprinopsis cinerea
okayama7#130]
Length = 209
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID T+A+++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITSAFES 59
>gi|238599142|ref|XP_002394798.1| hypothetical protein MPER_05256 [Moniliophthora perniciosa FA553]
gi|215464416|gb|EEB95728.1| hypothetical protein MPER_05256 [Moniliophthora perniciosa FA553]
Length = 64
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YCDYCD +LTHDS SVRK H G+ H NVK YY ++AQ++ID T+AY+A
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGKNHLANVKDYYASLGHDKAQSIIDQITSAYEAS 60
>gi|328857018|gb|EGG06136.1| hypothetical protein MELLADRAFT_71940 [Melampsora larici-populina
98AG31]
Length = 210
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD +L +SPSVRK H GR H NV+ YY ++AQN+ID T Y++G
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQNIIDEITRMYESG 60
>gi|440804342|gb|ELR25219.1| U1 zinc finger protein [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYCDYCD +LTHDSPSVRK+H G KHK V+ YY ++ ++ Q+LI Y+ G
Sbjct: 1 MPKYYCDYCDVFLTHDSPSVRKSHNDGWKHKAAVRAYYAQFEQDLTQSLIQQKIKEYQEG 60
Query: 61 KIANNP 66
K P
Sbjct: 61 KTGFGP 66
>gi|428164783|gb|EKX33797.1| hypothetical protein GUITHDRAFT_81129 [Guillardia theta CCMP2712]
Length = 82
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 14/75 (18%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDN--------------VKFYYQKWMEEQA 46
MP+YYCDYCD +LTHDSPSVRK H GRKH+DN V+ YY +++ +QA
Sbjct: 1 MPRYYCDYCDVFLTHDSPSVRKQHNSGRKHRDNVSMSSWGAGGDREQVRDYYGQFVSKQA 60
Query: 47 QNLIDATTAAYKAGK 61
Q++ID+ + + G+
Sbjct: 61 QSVIDSIISRREGGR 75
>gi|452001211|gb|EMD93671.1| hypothetical protein COCHEDRAFT_1171680 [Cochliobolus
heterostrophus C5]
Length = 207
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNTE 60
Query: 61 KIAN 64
AN
Sbjct: 61 GQAN 64
>gi|451855034|gb|EMD68326.1| hypothetical protein COCSADRAFT_22776 [Cochliobolus sativus
ND90Pr]
Length = 207
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNTE 60
Query: 61 KIAN 64
AN
Sbjct: 61 GQAN 64
>gi|384500985|gb|EIE91476.1| hypothetical protein RO3G_16187 [Rhizopus delemar RA 99-880]
Length = 160
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYC+YCD +LTHDS SVRK H G+ H NV+ YY + +++AQ +ID T AY+
Sbjct: 1 MPKYYCEYCDIFLTHDSSSVRKAHNAGKNHILNVRNYYAEISQDKAQAIIDEITRAYE-- 58
Query: 61 KIANNPFGNKGGAAIPP 77
K A +PP
Sbjct: 59 ---------KASAVLPP 66
>gi|189191362|ref|XP_001932020.1| glucose N-acetyltransferase 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973626|gb|EDU41125.1| glucose N-acetyltransferase 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 371
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 164 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNTE 223
Query: 61 KIAN 64
AN
Sbjct: 224 GQAN 227
>gi|406864024|gb|EKD17070.1| u1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 185
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 59 GQSSSNP 65
>gi|331250853|ref|XP_003338031.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|363805506|sp|E3LAN7.1|RU1C1_PUCGT RecName: Full=U1 small nuclear ribonucleoprotein C-1; Short=U1
snRNP C-1; Short=U1-C-1; Short=U1C-1
gi|309317021|gb|EFP93612.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 190
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD +L +SPSVRK H GR H NV+ YY ++AQ+ ID T ++ G
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQSYIDEITRMFETG 60
Query: 61 KIANNPFGNKGGAAIPP 77
N N+G PP
Sbjct: 61 --GGNSTSNRGPGGNPP 75
>gi|331232035|ref|XP_003328680.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|363805508|sp|E3KIY6.1|RU1C2_PUCGT RecName: Full=U1 small nuclear ribonucleoprotein C-2; Short=U1
snRNP C-2; Short=U1-C-2; Short=U1C-2
gi|309307670|gb|EFP84261.1| U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 188
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD +L +SPSVRK H GR H NV+ YY ++AQ+ ID T ++ G
Sbjct: 1 MGKYYCDYCDVFLVSESPSVRKAHNSGRNHLTNVRDYYSSLGHDKAQSYIDEITRMFETG 60
Query: 61 KIANNPFGNKGGAAIPP 77
N N+G PP
Sbjct: 61 --GGNSTSNRGPGGNPP 75
>gi|353234540|emb|CCA66564.1| related to lipoyltransferase [Piriformospora indica DSM 11827]
Length = 492
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
MPK+YCDYCD +LTHDS +VRK H GR H NV+ YY ++AQ +ID T A++
Sbjct: 1 MPKHYCDYCDVWLTHDSAAVRKAHNSGRNHLSNVREYYASLGHDKAQTIIDQITQAFE 58
>gi|154298100|ref|XP_001549474.1| hypothetical protein BC1G_12015 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 59 GQSSSNP 65
>gi|330927242|ref|XP_003301797.1| hypothetical protein PTT_13388 [Pyrenophora teres f. teres 0-1]
gi|311323215|gb|EFQ90104.1| hypothetical protein PTT_13388 [Pyrenophora teres f. teres 0-1]
Length = 573
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 44/67 (65%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T AY
Sbjct: 371 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAYNTE 430
Query: 61 KIANNPF 67
AN F
Sbjct: 431 GQANPLF 437
>gi|156044630|ref|XP_001588871.1| hypothetical protein SS1G_10419 [Sclerotinia sclerotiorum 1980]
gi|363805531|sp|A7EYK3.1|RU1C_SCLS1 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|154694807|gb|EDN94545.1| hypothetical protein SS1G_10419 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 181
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 60 GKIANNP 66
G+ ++NP
Sbjct: 59 GQSSSNP 65
>gi|392355380|ref|XP_003752022.1| PREDICTED: uncharacterized protein LOC100910029 [Rattus
norvegicus]
Length = 203
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATT 54
MPK+YCDYCD YLT DSP+ R+ C RKHK V+ YQK EEQAQ+LID TT
Sbjct: 1 MPKFYCDYCDKYLTLDSPTERQKCCSERKHK--VRDSYQKRTEEQAQSLIDKTT 52
>gi|392338452|ref|XP_003753540.1| PREDICTED: uncharacterized LOC100910029 [Rattus norvegicus]
Length = 259
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATT 54
MPK+YCDYCD YLT DSP+ R+ C RKHK V+ YQK EEQAQ+LID TT
Sbjct: 1 MPKFYCDYCDKYLTLDSPTERQKCCSERKHK--VRDSYQKRTEEQAQSLIDKTT 52
>gi|240281974|gb|EER45477.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325088113|gb|EGC41423.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 242
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GK 61
Y DYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A G+
Sbjct: 2 NYLGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAEGQ 61
Query: 62 IANNP 66
++NP
Sbjct: 62 ASSNP 66
>gi|363805510|sp|C0NN85.1|RU1C_AJECG RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|225559050|gb|EEH07333.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 242
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GK 61
Y DYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A G+
Sbjct: 2 NYLGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAEGQ 61
Query: 62 IANNP 66
++NP
Sbjct: 62 ASSNP 66
>gi|159125570|gb|EDP50687.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
fumigatus A1163]
Length = 238
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 6 CDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
CDYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 28 CDYCDVYLTHDSMSVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAA 81
>gi|168040659|ref|XP_001772811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675888|gb|EDQ62378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 309
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MP+YYCDYCDT+LTHDSPSVRK HC G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPRYYCDYCDTHLTHDSPSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLID 51
>gi|395330397|gb|EJF62780.1| zf-U1-domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 174
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
K+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 1 KHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYES 57
>gi|255947242|ref|XP_002564388.1| Pc22g03450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591405|emb|CAP97633.1| Pc22g03450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 185
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPKY DYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 1 MPKY-NDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGQEKAQSVIDSITSSYAA 58
>gi|303273278|ref|XP_003056000.1| U1 small nuclear ribonucleoprotein C protein [Micromonas pusilla
CCMP1545]
gi|226462084|gb|EEH59376.1| U1 small nuclear ribonucleoprotein C protein [Micromonas pusilla
CCMP1545]
Length = 90
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAY 57
+P+YYCDYCD YLTHDSPSVRK H G KHK NV+ YY ++ E+ + ID +++
Sbjct: 6 VPRYYCDYCDAYLTHDSPSVRKQHNAGYKHKANVRNYYMQFEEQTTLSFIDKKLSSF 62
>gi|443898320|dbj|GAC75657.1| hypothetical protein PANT_16d00086 [Pseudozyma antarctica T-34]
Length = 227
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 37/62 (59%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M K+YCDYCD +LTHDS SVRK H GR H NV+ YYQ EQ Q +ID Y
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLDPEQIQQVIDTLAHEYDRR 60
Query: 61 KI 62
I
Sbjct: 61 GI 62
>gi|392568265|gb|EIW61439.1| Sua5/YciO/YrdC/YwlC family protein [Trametes versicolor FP-101664
SS1]
Length = 543
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
MPK+YCDYCD +LTHDS SVRK H GR H NV+ YY ++AQ++ID TAAY++
Sbjct: 1 MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYES 59
>gi|321261858|ref|XP_003195648.1| U1 small nuclear ribonucleoprotein [Cryptococcus gattii WM276]
gi|317462122|gb|ADV23861.1| U1 small nuclear ribonucleoprotein, putative [Cryptococcus gattii
WM276]
Length = 214
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD YLTHDS + RK H GR H NV+ Y+ QAQ+LID +++G
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQHESG 60
>gi|134055442|emb|CAK43957.1| unnamed protein product [Aspergillus niger]
Length = 194
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPKY DYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 1 MPKY-NDYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVIDSITSSYAAE 59
Query: 60 GKIANNP 66
G+ NP
Sbjct: 60 GQAVPNP 66
>gi|121708613|ref|XP_001272188.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
clavatus NRRL 1]
gi|119400336|gb|EAW10762.1| U1 small nuclear ribonucleoprotein C, putative [Aspergillus
clavatus NRRL 1]
Length = 218
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 4 YYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKI 62
+ DYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A G+
Sbjct: 3 WIGDYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAAEGQA 62
Query: 63 ANNP 66
NP
Sbjct: 63 VPNP 66
>gi|58271212|ref|XP_572762.1| U1 small nuclear ribonucleoprotein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114610|ref|XP_774013.1| hypothetical protein CNBH0600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74683500|sp|Q5KC16.1|RU1C_CRYNJ RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|50256643|gb|EAL19366.1| hypothetical protein CNBH0600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229021|gb|AAW45455.1| U1 small nuclear ribonucleoprotein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 220
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD YLTHDS + RK H GR H NV+ Y+ QAQ+LID +++G
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQHESG 60
>gi|405122446|gb|AFR97213.1| U1 small nuclear ribonucleoprotein [Cryptococcus neoformans var.
grubii H99]
Length = 222
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD YLTHDS + RK H GR H NV+ Y+ QAQ+LID +++G
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQHESG 60
>gi|295661015|ref|XP_002791063.1| hypothetical protein PAAG_06974 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280990|gb|EEH36556.1| hypothetical protein PAAG_06974 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 508
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 7 DYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANN 65
DYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A G+ ++N
Sbjct: 264 DYCDVYLTHDSMSVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAEGQASSN 323
Query: 66 P 66
P
Sbjct: 324 P 324
>gi|343426493|emb|CBQ70023.1| related to U1 small nuclear ribonucleoprotein C [Sporisorium
reilianum SRZ2]
Length = 220
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 37/62 (59%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M K+YCDYCD +LTHDS SVRK H GR H NV+ YYQ EQ Q ++D Y
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLDPEQIQQVLDTLAQEYDRR 60
Query: 61 KI 62
I
Sbjct: 61 GI 62
>gi|322710172|gb|EFZ01747.1| U1 small nuclear ribonucleoprotein C, putative [Metarhizium
anisopliae ARSEF 23]
Length = 193
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA- 59
MPK CDYCD YLTHDS SVRK H G+ H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 MPK--CDYCDVYLTHDSMSVRKAHNSGKNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAE 58
Query: 60 GKIANNP 66
G+ NP
Sbjct: 59 GQAHANP 65
>gi|345308972|ref|XP_001509353.2| PREDICTED: hypothetical protein LOC100078281, partial
[Ornithorhynchus anatinus]
Length = 302
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 18 PSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDAT 53
PSVRKTHC GRKHK+NVK YYQKWMEEQAQ+LID T
Sbjct: 1 PSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKT 36
>gi|443912139|gb|ELU35816.1| zf-U1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 117
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 18/78 (23%)
Query: 1 MPKYYCDYCDTYLTHDSPS------------------VRKTHCQGRKHKDNVKFYYQKWM 42
MPK+YCDYCD +LTHDS S VRK H GR H NV+ YY
Sbjct: 1 MPKHYCDYCDVFLTHDSTSGMKYIHVLLGLISNRIHLVRKAHNSGRNHLANVQDYYASLG 60
Query: 43 EEQAQNLIDATTAAYKAG 60
++AQN+ID T+AY++G
Sbjct: 61 HDKAQNIIDQITSAYESG 78
>gi|367023837|ref|XP_003661203.1| hypothetical protein MYCTH_2048966, partial [Myceliophthora
thermophila ATCC 42464]
gi|347008471|gb|AEO55958.1| hypothetical protein MYCTH_2048966, partial [Myceliophthora
thermophila ATCC 42464]
Length = 55
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 5 YCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
+CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 FCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAA 55
>gi|367036637|ref|XP_003648699.1| hypothetical protein THITE_2033836, partial [Thielavia terrestris
NRRL 8126]
gi|346995960|gb|AEO62363.1| hypothetical protein THITE_2033836, partial [Thielavia terrestris
NRRL 8126]
Length = 55
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 5 YCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
+CDYCD YLTHDS SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 1 FCDYCDVYLTHDSMSVRKAHNNGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAA 55
>gi|358054954|dbj|GAA99021.1| hypothetical protein E5Q_05710 [Mixia osmundae IAM 14324]
Length = 511
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP++YCDYCD +LTHDS SVR H GR H NVK YY + Q +ID A + G
Sbjct: 1 MPRHYCDYCDIFLTHDSRSVRHAHNSGRNHLTNVKDYYASLGTDDIQTMIDKILHAIERG 60
Query: 61 K 61
+
Sbjct: 61 Q 61
>gi|392572818|gb|EIW65962.1| hypothetical protein TREMEDRAFT_72500 [Tremella mesenterica DSM
1558]
Length = 193
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M KYYCDYCD YLTHDS + RK H GR H NV+ Y+ + AQ++ID ++ G
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNTGRNHVSNVRDYFASLGHDTAQSIIDQIVQQHETG 60
Query: 61 KIA 63
A
Sbjct: 61 GRA 63
>gi|317138174|ref|XP_003189021.1| hypothetical protein AOR_1_392184 [Aspergillus oryzae RIB40]
Length = 366
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 7 DYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
DYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 154 DYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVIDSITSSYAA 206
>gi|350638399|gb|EHA26755.1| hypothetical protein ASPNIDRAFT_35817 [Aspergillus niger ATCC 1015]
Length = 589
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 7 DYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANN 65
DYCD YLTHDS SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A G+ N
Sbjct: 375 DYCDVYLTHDSMSVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVIDSITSSYAAEGQAVPN 434
Query: 66 P 66
P
Sbjct: 435 P 435
>gi|452822887|gb|EME29902.1| U1 small nuclear ribonucleoprotein C [Galdieria sulphuraria]
Length = 126
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
M KYYCDYCD YLTHDSP+VRK H G +H+ N YY++++ E Q IDA ++
Sbjct: 1 MGKYYCDYCDVYLTHDSPAVRKQHNDGNRHRMNFAEYYRQFIGESLQQQIDAVVYDFE 58
>gi|388856036|emb|CCF50413.1| related to U1 small nuclear ribonucleoprotein C [Ustilago hordei]
Length = 230
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAY 57
M K+YCDYCD +LTHDS SVRK H GR H NV+ YYQ +Q Q ++D Y
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQSLDPDQIQQVLDTLAKEY 57
>gi|19112176|ref|NP_595384.1| U1 snRNP-associated protein Usp103 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74625357|sp|Q9P794.1|RU1C_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
gi|7573202|emb|CAB87371.1| U1 snRNP-associated protein Usp103 (predicted) [Schizosaccharomyces
pombe]
Length = 182
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID--ATTAAYK 58
MP+Y CDYC +LTHDS SVRK H GR H NV+ YY K +E+AQ ++ A++ K
Sbjct: 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEERASSGFLK 60
Query: 59 AGKIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPG---MMPPGMNM 115
G N A PP N+ +L P PPP ++ M P GMN
Sbjct: 61 KG---NGSLDLPYAYAFPPKYNVFNLGCP------------PPPYIVSANTYMAPKGMNA 105
Query: 116 M 116
M
Sbjct: 106 M 106
>gi|71023051|ref|XP_761755.1| hypothetical protein UM05608.1 [Ustilago maydis 521]
gi|74699535|sp|Q4P2Q5.1|RU1C_USTMA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|46101241|gb|EAK86474.1| hypothetical protein UM05608.1 [Ustilago maydis 521]
Length = 221
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 36/62 (58%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
M K+YCDYCD +LTHDS SVRK H GR H NV+ YYQ E Q ++D Y
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLEPECIQQVLDTLAQEYDLR 60
Query: 61 KI 62
I
Sbjct: 61 GI 62
>gi|301105202|ref|XP_002901685.1| U1 small nuclear ribonucleoprotein C, putative [Phytophthora
infestans T30-4]
gi|363805526|sp|D0NHA2.1|RU1C_PHYIT RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|262100689|gb|EEY58741.1| U1 small nuclear ribonucleoprotein C, putative [Phytophthora
infestans T30-4]
Length = 138
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MP+YYCDYCDTYLTHDS + RK H +G KH++NVK YY++++ Q
Sbjct: 1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLAGQ 45
>gi|400598594|gb|EJP66303.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF
2860]
Length = 219
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 30/96 (31%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWM------------------ 42
MPK++CDYCD YLTHDS SVRK H GR H NV YYQ+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQRLFPPPTLPARARERRKQGKS 60
Query: 43 -----------EEQAQNLIDATTAAYKA-GKIANNP 66
E+AQ++ID+ T++Y A G+ NP
Sbjct: 61 SKSDTSSAEIGHEKAQSVIDSITSSYAAEGQAHANP 96
>gi|328876695|gb|EGG25058.1| C2H2-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 149
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
MPKYYC+YCD YLTHDSPSVR++H G+ H+ V+ YYQ++ + +++ +
Sbjct: 1 MPKYYCEYCDKYLTHDSPSVRRSHIIGKVHQQAVRLYYQQFEADYHKSITE 51
>gi|302831293|ref|XP_002947212.1| hypothetical protein VOLCADRAFT_116316 [Volvox carteri f.
nagariensis]
gi|300267619|gb|EFJ51802.1| hypothetical protein VOLCADRAFT_116316 [Volvox carteri f.
nagariensis]
Length = 128
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQ 47
MP+YYCDYCDTYLTH+S +VRK H G KHK NV+ YY +++ A+
Sbjct: 1 MPRYYCDYCDTYLTHESAAVRKQHNSGYKHKANVRNYYNNFLQISAE 47
>gi|290991023|ref|XP_002678135.1| predicted protein [Naegleria gruberi]
gi|284091746|gb|EFC45391.1| predicted protein [Naegleria gruberi]
Length = 226
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDAT 53
MPK+YCDYCD +LT+DS SVRK HC+G +HK NV+ ++ +++ + L+ +T
Sbjct: 1 MPKFYCDYCDVFLTNDSISVRKLHCKGWRHKTNVRAFFAQFVGDPTSALMVST 53
>gi|298708559|emb|CBJ30644.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 180
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQ 47
MP+YYCDYC TYLTHDS R+ H +G KH DNVK +Y++++E+ Q
Sbjct: 1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEKFVQ 47
>gi|363805529|sp|D3B3B7.1|RU1C_POLPA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|281209647|gb|EFA83815.1| C2H2-type zinc finger-containing protein [Polysphondylium
pallidum PN500]
Length = 141
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ----KWMEEQAQ 47
MPKYYC+YCD YLTHDSPSVRK+H G+ H+ V YY+ +W + Q Q
Sbjct: 1 MPKYYCEYCDKYLTHDSPSVRKSHTIGKVHQQAVTLYYKQFEAEWFKSQMQ 51
>gi|320165818|gb|EFW42717.1| hypothetical protein CAOG_07849 [Capsaspora owczarzaki ATCC
30864]
Length = 251
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP+Y+C YC +LTHDS SVRKTH GRKHK+ VK +++ ++ E
Sbjct: 30 MPRYFCHYCQAHLTHDSSSVRKTHISGRKHKEAVKLFFENYINE 73
>gi|159474196|ref|XP_001695215.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276149|gb|EDP01923.1| predicted protein [Chlamydomonas reinhardtii]
Length = 154
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME 43
MP+YYCDYCDTYLTH+S +VRK H G KHK NV+ YY +++
Sbjct: 1 MPRYYCDYCDTYLTHESAAVRKQHNSGYKHKANVRNYYNNFIQ 43
>gi|307102929|gb|EFN51195.1| hypothetical protein CHLNCDRAFT_59317 [Chlorella variabilis]
Length = 207
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYY 38
M ++YCDYCD++LTHDSP+VRK H G KHK NVK YY
Sbjct: 1 MVRFYCDYCDSFLTHDSPAVRKQHNSGYKHKSNVKAYY 38
>gi|164659072|ref|XP_001730661.1| hypothetical protein MGL_2457 [Malassezia globosa CBS 7966]
gi|159104557|gb|EDP43447.1| hypothetical protein MGL_2457 [Malassezia globosa CBS 7966]
Length = 166
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYK 58
K+YCDYCD +LTHDS SVRK H GR H NV+ YY + Q + D+ Y+
Sbjct: 3 KHYCDYCDVFLTHDSTSVRKAHNCGRNHLQNVRDYYASISPYEMQAIADSILREYQ 58
>gi|412994110|emb|CCO14621.1| U1 small nuclear ribonucleoprotein C [Bathycoccus prasinos]
Length = 111
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME 43
MP+YYC+YCD YLTHDSP+VR+ H G KHK NV+ YY ++ +
Sbjct: 1 MPRYYCEYCDAYLTHDSPTVRRQHISGFKHKANVRNYYLQFTD 43
>gi|388580103|gb|EIM20420.1| zf-U1-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 102
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
K+YCDYCD +LTH+S +VRK H GR H NVK YY ++AQ +ID +++G
Sbjct: 5 KFYCDYCDVFLTHNSAAVRKAHNSGRNHLINVKDYYASLGHDKAQFIIDEICRIHESG 62
>gi|348689590|gb|EGZ29404.1| hypothetical protein PHYSODRAFT_476304 [Phytophthora sojae]
Length = 66
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MP+YYCDYCDTYLTHDS RK H +G KH++NVK YY++++ Q
Sbjct: 1 MPRYYCDYCDTYLTHDSVPGRKQHNRGWKHRENVKLYYEQFLAGQ 45
>gi|325184914|emb|CCA19406.1| U1 small nuclear ribonucleoprotein C putative [Albugo laibachii
Nc14]
Length = 177
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 29/108 (26%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP+YYCDYCDTYLTHDS + RK H +G KH++NVK YY + +
Sbjct: 47 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYDQLL------------------ 88
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPP--RQVGPPPGMQQGPPPGMMP 106
AN + GG+ ++ LM P GP PG+ PGM+P
Sbjct: 89 --ANQTILSTGGS-------VAMLMAPGAWLRGPTPGIPTPLRPGMIP 127
>gi|403221525|dbj|BAM39658.1| U1 snRNP-specific protein C [Theileria orientalis strain
Shintoku]
Length = 160
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC YLTH SP+ RK H QGRKH + YYQK + E+
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHINAKVDYYQKLVRER 45
>gi|2136118|pir||I56013 ribonucleoprotein - human (fragment)
gi|338261|gb|AAA36618.1| ribonucleoprotein, partial [Homo sapiens]
Length = 106
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 28 RKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
RKHK+NVK YYQKWMEEQAQ+LID TTAA++ GKI
Sbjct: 4 RKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKI 38
>gi|428672006|gb|EKX72921.1| conserved hypothetical protein [Babesia equi]
Length = 135
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC YLTH SP+ RK H QGRKH + YYQK + E+
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHINAKVDYYQKLVRER 45
>gi|84997764|ref|XP_953603.1| RNA-binding protein (U1 snRNP-like) [Theileria annulata]
gi|74954025|sp|Q4UJ14.1|RU1C_THEAN RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|65304600|emb|CAI72925.1| RNA-binding protein (U1 snRNP-like), putative [Theileria
annulata]
Length = 151
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC YLTH SP+ RK H QGRKH Y+Q+ + EQ
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>gi|145343715|ref|XP_001416458.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576683|gb|ABO94751.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 53
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWM 42
M +YYCDYC+ +LTHDS +VRK H G KHK NV+ YY +++
Sbjct: 1 MARYYCDYCNAHLTHDSATVRKQHNSGFKHKANVRAYYAQFL 42
>gi|71034095|ref|XP_766689.1| hypothetical protein [Theileria parva strain Muguga]
gi|122052875|sp|Q4N6K2.1|RU1C_THEPA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|68353646|gb|EAN34406.1| hypothetical protein TP01_1168 [Theileria parva]
Length = 141
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC YLTH SP+ RK H QGRKH Y+Q+ + EQ
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>gi|156102995|ref|XP_001617190.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|363805528|sp|A5JZQ2.1|RU1C_PLAVS RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|148806064|gb|EDL47463.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 240
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA---QNLIDATTAAY 57
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+ QN + +
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREEGITPQNFL-----GF 55
Query: 58 KAGKIANNPFGN 69
+ NN GN
Sbjct: 56 LGNRAFNNMLGN 67
>gi|320580751|gb|EFW94973.1| U1 snRNP U1C (U1-C), putative [Ogataea parapolymorpha DL-1]
Length = 125
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE----QAQNL-IDATTA 55
MPKYYCDYC +YLTHDS SVRK+H QGR H YY++ E + Q L + +
Sbjct: 1 MPKYYCDYCKSYLTHDSLSVRKSHLQGRNHLTFYCEYYEEIARENGLLETQELPWEYSLE 60
Query: 56 AYKAGKIANNPFGNKGGAAIPPPSNL 81
+ AG + K G +PPP L
Sbjct: 61 THYAGMPGSR--TQKNGLKLPPPPTL 84
>gi|399216245|emb|CCF72933.1| unnamed protein product [Babesia microti strain RI]
Length = 183
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC+ YLTH SP+ RK H QG+KH + YYQ + E+
Sbjct: 1 MPKFYCEYCNIYLTHSSPAGRKQHSQGKKHINAKIEYYQNLIRER 45
>gi|363805515|sp|C4YIU5.1|RU1C_CANAW RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|238882392|gb|EEQ46030.1| hypothetical protein CAWG_04374 [Candida albicans WO-1]
Length = 150
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFY 37
MPKYYCDYC +YLTHD+ SVRK+H QGR H +KFY
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNH---IKFY 34
>gi|241951652|ref|XP_002418548.1| U1 snRNP U1C (U1-C), putative; U1 snRNP complex, putative;
pre-mRNA splicing complex subunit, putative [Candida
dubliniensis CD36]
gi|223641887|emb|CAX43850.1| U1 snRNP U1C (U1-C), putative [Candida dubliniensis CD36]
Length = 157
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFY 37
MPKYYCDYC +YLTHD+ SVRK+H QGR H +KFY
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNH---IKFY 34
>gi|389583944|dbj|GAB66678.1| hypothetical protein PCYB_094620 [Plasmodium cynomolgi strain B]
Length = 2720
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 64 NNPFGNKGGAAIPPPSN------LSSLMPPRQVGPPPGMQQGPPPGMMP--GMMPPGMNM 115
+N G G P +N +S ++P +GP GM GP GM+P GM+P
Sbjct: 112 DNTTGVPAGVVGSPGNNTNALNAMSGMVPMNGMGPMNGM--GPMSGMVPMNGMVP----- 164
Query: 116 MMMGMNPGMMGMRPM--MGGMGGMGPMMAMGPMGPMGPM 152
M GM P M GM PM MG M GMGPM M PM MGPM
Sbjct: 165 -MSGMGP-MNGMVPMSGMGPMNGMGPMNGMAPMSAMGPM 201
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 32 DNVKFYYQKWMEEQAQNLIDATTAAYKAGKIANNPFGNKGGAAIPPPSNLSSLMPPRQVG 91
DN +F+ KW +Q A AA K + GN G AI N + + P VG
Sbjct: 71 DNFEFFI-KWKNYDSQ----ARKAALKLTEELEIVNGN-GANAISSIDNTTGV-PAGVVG 123
Query: 92 PPPGMQQGPPPGMMPGMMPPGMNMM--MMGMNPGMMGMRPMMG--GMGGMGPMMAMGP-- 145
P M GM+P MN M M GM P M GM PM G M GMGPM M P
Sbjct: 124 SPGNNTNAL--NAMSGMVP--MNGMGPMNGMGP-MSGMVPMNGMVPMSGMGPMNGMVPMS 178
Query: 146 -MGPMGPMRP 154
MGPM M P
Sbjct: 179 GMGPMNGMGP 188
>gi|389586198|dbj|GAB68927.1| hypothetical protein PCYB_143550, partial [Plasmodium cynomolgi
strain B]
Length = 249
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA---QNLIDATTAAY 57
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+ QN +
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREEGITPQNFL------- 53
Query: 58 KAGKIANNPFGN 69
G + N+ F N
Sbjct: 54 --GFLGNDAFNN 63
>gi|47028269|gb|AAT09067.1| U1 small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 128
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWM 42
M ++YCDYCD YLTHDS + RK H GR+H++NV+ YY +++
Sbjct: 1 MGRFYCDYCDIYLTHDSQAGRKQHMHGRRHQENVRQYYSEFL 42
>gi|68489334|ref|XP_711508.1| hypothetical protein CaO19.12947 [Candida albicans SC5314]
gi|68489383|ref|XP_711484.1| hypothetical protein CaO19.5492 [Candida albicans SC5314]
gi|74584417|sp|Q59P44.1|RU1C_CANAL RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|46432789|gb|EAK92256.1| hypothetical protein CaO19.5492 [Candida albicans SC5314]
gi|46432815|gb|EAK92281.1| hypothetical protein CaO19.12947 [Candida albicans SC5314]
Length = 150
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFY 37
MPKYYCDYC +YLTHD+ SVRK+H QGR H +KFY
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLQGRNH---IKFY 34
>gi|221061187|ref|XP_002262163.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
gi|363805527|sp|B3LC82.1|RU1C_PLAKH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|193811313|emb|CAQ42041.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
Length = 228
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA---QNLI 50
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+ QN +
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHVQGRKHISAKIEYFQNLLREEGITPQNFL 53
>gi|308800576|ref|XP_003075069.1| U1snrC U1 small nuclear ribonucleoprotein C, probable (IC)
[Ostreococcus tauri]
gi|119358875|emb|CAL52341.2| U1snrC U1 small nuclear ribonucleoprotein C, probable (IC)
[Ostreococcus tauri]
Length = 66
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKW 41
M +YYCDYCD +LTHDS +VRK H G KHK N + YY ++
Sbjct: 1 MARYYCDYCDAFLTHDSATVRKQHNSGFKHKANARAYYAQF 41
>gi|401403179|ref|XP_003881430.1| putative U1 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
gi|325115842|emb|CBZ51397.1| putative U1 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
Length = 234
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MPKYYC+YCD YLTH SP+ R+ H GRKH + Y+Q + E
Sbjct: 1 MPKYYCEYCDIYLTHSSPAGRRQHATGRKHINQKIEYFQNLIRE 44
>gi|237842205|ref|XP_002370400.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211968064|gb|EEB03260.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221502856|gb|EEE28570.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MPKYYC+YCD YLTH SP+ R+ H GRKH + Y+Q + E
Sbjct: 1 MPKYYCEYCDIYLTHSSPAGRRQHATGRKHINQKIEYFQNLIRE 44
>gi|124512530|ref|XP_001349398.1| RNA-binding protein (U1 snRNP-like), putative [Plasmodium
falciparum 3D7]
gi|74815005|sp|Q8IAW3.1|RU1C_PLAF7 RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|23499167|emb|CAD51247.1| RNA-binding protein (U1 snRNP-like), putative [Plasmodium
falciparum 3D7]
Length = 235
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA---QNLIDATTAAY 57
MPKYYC+YCD YLTH SP R+ H GRKH Y+Q + E+ QN + +
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIHGRKHISAKIEYFQNLLREEGITPQNFL-----GF 55
Query: 58 KAGKIANNPFGN 69
+ NNP GN
Sbjct: 56 LNNRNINNPLGN 67
>gi|255725110|ref|XP_002547484.1| hypothetical protein CTRG_01791 [Candida tropicalis MYA-3404]
gi|240135375|gb|EER34929.1| hypothetical protein CTRG_01791 [Candida tropicalis MYA-3404]
Length = 149
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKW-MEEQAQNLIDATTAAYKA 59
MPKYYCDYC +YLTHD+ SVRK+H QGR H +K Y + ++ + NL + + Y
Sbjct: 1 MPKYYCDYCKSYLTHDTLSVRKSHLQGRNH---IKLYCDYYELKAKETNLWNPSDVIYDI 57
Query: 60 GKIANNPFGNKGGAA 74
N + N ++
Sbjct: 58 TLDKINTYENSLKSS 72
>gi|260947742|ref|XP_002618168.1| hypothetical protein CLUG_01627 [Clavispora lusitaniae ATCC 42720]
gi|238848040|gb|EEQ37504.1| hypothetical protein CLUG_01627 [Clavispora lusitaniae ATCC 42720]
Length = 135
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 34/124 (27%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNL--IDATTAAYK 58
MPKYYCDYC +YLTHD SVRK+H G+ H YY EE+A+ L D Y+
Sbjct: 1 MPKYYCDYCKSYLTHDKMSVRKSHLAGKNHIRKYCLYY----EEKAKQLGIWDTNDFTYE 56
Query: 59 AG------------KIANNPFGNKGGA------------AIPPPSNLSSLMPPRQVGPPP 94
K + +K + +PPP NL++L PP PP
Sbjct: 57 VDMGYLSQGAPSPEKFSRKILRSKDKSFVRQKDEAEKEICLPPPPNLANLAPP----PPS 112
Query: 95 GMQQ 98
++
Sbjct: 113 AIRH 116
>gi|118347669|ref|XP_001007311.1| U1 zinc finger family protein [Tetrahymena thermophila]
gi|89289078|gb|EAR87066.1| U1 zinc finger family protein [Tetrahymena thermophila SB210]
Length = 626
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MPK+YC+YC YLTH SPS R H +GRKH +N YY++ +E+
Sbjct: 384 MPKFYCEYCGIYLTHSSPSGRSQHAKGRKHINNRIEYYKQVIED 427
>gi|83273883|ref|XP_729593.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|74882724|sp|Q7RNM5.1|RU1C_PLAYO RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|23487848|gb|EAA21158.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 201
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREE 45
>gi|448118568|ref|XP_004203531.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|448120973|ref|XP_004204114.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|359384399|emb|CCE79103.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
gi|359384982|emb|CCE78517.1| Piso0_001142 [Millerozyma farinosa CBS 7064]
Length = 121
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQN--LIDATTAAYK 58
MPKYYCDYC +YLTHD+ SVRK+H G+ H YY + E +A+ + D + Y+
Sbjct: 1 MPKYYCDYCKSYLTHDTISVRKSHLTGKNHIR----YYCNYYEGKAKEAGIWDNQESPYE 56
Query: 59 AGKIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQ--GPPPGMM 105
G N G N S + PPP +Q PPP +
Sbjct: 57 IGINV----LNTGAPGFSKTENSESQDDQLSLPPPPNLQGFPNPPPSVF 101
>gi|363805512|sp|F4NYQ2.1|RU1C_BATDJ RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|328772028|gb|EGF82067.1| hypothetical protein BATDEDRAFT_23335 [Batrachochytrium
dendrobatidis JAM81]
Length = 228
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 7 DYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME-EQAQNLIDATTAAY 57
DYCD +LTHDS SVRK H G KHK V+ YY ++ + Q++ID T AY
Sbjct: 14 DYCDIFLTHDSASVRKAHNTGWKHKMQVEHYYNAEVDPAKIQSVIDNVTKAY 65
>gi|68071759|ref|XP_677793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|74983065|sp|Q4YBG7.1|RU1C_PLABA RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|56498044|emb|CAI04780.1| conserved hypothetical protein [Plasmodium berghei]
Length = 197
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREE 45
>gi|70943469|ref|XP_741777.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|74976169|sp|Q4XRM7.1|RU1C_PLACH RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|56520371|emb|CAH80435.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 192
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQA---QNLI 50
MPKYYC+YCD YLTH SP R+ H QGRKH Y+Q + E+ QN +
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREEGITPQNFL 53
>gi|145535842|ref|XP_001453654.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421376|emb|CAK86257.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YC+YC YLTH SPS RK H G+KH + YY+ M + L+D A+++
Sbjct: 1 MPKFYCEYCGIYLTHSSPSGRKQHSLGKKHISAREDYYRAVMSD----LVDQLKASFQKN 56
Query: 61 KI 62
I
Sbjct: 57 II 58
>gi|145509180|ref|XP_001440534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407751|emb|CAK73137.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPK+YC+YC YLTH SPS RK H G+KH + YY+ M +L+D A+++
Sbjct: 1 MPKFYCEYCGIYLTHSSPSGRKQHSLGKKHISAREDYYRAVMS----DLVDQLKASFQKN 56
Query: 61 KI 62
I
Sbjct: 57 II 58
>gi|156088117|ref|XP_001611465.1| U1 zinc finger family protein [Babesia bovis]
gi|154798719|gb|EDO07897.1| U1 zinc finger family protein [Babesia bovis]
Length = 128
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPK+YC+YC YLTH SP+ RK H GRKH YYQ+ + E
Sbjct: 1 MPKFYCEYCGIYLTHSSPAGRKQHSMGRKHISMKVEYYQRLVREH 45
>gi|45184966|ref|NP_982684.1| AAR142Cp [Ashbya gossypii ATCC 10895]
gi|44980575|gb|AAS50508.1| AAR142Cp [Ashbya gossypii ATCC 10895]
gi|374105884|gb|AEY94795.1| FAAR142Cp [Ashbya gossypii FDAG1]
Length = 212
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQ 47
M +YYCDYC YLTHDS SVRK+H G+ H YY ++QA+
Sbjct: 1 MARYYCDYCHAYLTHDSLSVRKSHLIGKNHIRLTADYYYNKAQQQAK 47
>gi|403216485|emb|CCK70982.1| hypothetical protein KNAG_0F03200 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
M +YYC+YC +YLTHD+ SVRK+H G+ H V YY+ EQ
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHLRVVADYYRNKQLEQ 45
>gi|126137427|ref|XP_001385237.1| hypothetical protein PICST_32313 [Scheffersomyces stipitis CBS
6054]
gi|126092459|gb|ABN67208.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 144
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQN 48
MPKYYCDYC++YLTHD+ SVRK+H GR H +K YY + E +A+
Sbjct: 1 MPKYYCDYCNSYLTHDTMSVRKSHLIGRNH---IK-YYCTYYETKAKE 44
>gi|322698311|gb|EFY90082.1| U1 small nuclear ribonucleoprotein C, putative [Metarhizium acridum
CQMa 102]
Length = 244
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 28/88 (31%)
Query: 7 DYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWM------------------------ 42
DYCD YLTHDS SVRK H G+ H NV YYQ+
Sbjct: 28 DYCDVYLTHDSMSVRKAHNSGKNHLRNVVDYYQRTSPPYSVPSPSHDIPPRDHTSNNLAT 87
Query: 43 ---EEQAQNLIDATTAAYKA-GKIANNP 66
E+AQ++ID+ T++Y A G+ NP
Sbjct: 88 EIGHEKAQSVIDSITSSYAAEGQAHANP 115
>gi|254568494|ref|XP_002491357.1| Component of the U1 snRNP complex required for pre-mRNA splicing
[Komagataella pastoris GS115]
gi|238031154|emb|CAY69077.1| Component of the U1 snRNP complex required for pre-mRNA splicing
[Komagataella pastoris GS115]
gi|328352129|emb|CCA38528.1| U1 small nuclear ribonucleoprotein C [Komagataella pastoris CBS
7435]
Length = 122
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNL 49
M KYYC+YC++YLTHDS SVRK+H GR H YY EE+A+ L
Sbjct: 1 MAKYYCEYCNSYLTHDSLSVRKSHLIGRNHLRKYCDYY----EEKAKEL 45
>gi|363750406|ref|XP_003645420.1| hypothetical protein Ecym_3094 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889054|gb|AET38603.1| Hypothetical protein Ecym_3094 [Eremothecium cymbalariae
DBVPG#7215]
Length = 255
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKH-KDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
M +YYCDYC +YLTHD+ SVRK+H G+ H + +YY K +++ L+
Sbjct: 1 MARYYCDYCHSYLTHDTLSVRKSHLIGKNHIRLTADYYYNKANQQKLLFLL--------- 51
Query: 60 GKIANNPFGNKGGAAIPPPSNLSS 83
K++ + A+ PPS LSS
Sbjct: 52 PKVSKRRRSRQRCLAVKPPS-LSS 74
>gi|149245042|ref|XP_001527055.1| hypothetical protein LELG_01884 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449449|gb|EDK43705.1| hypothetical protein LELG_01884 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 185
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFY 37
MPKYYCDYC +YLTHD+ SVRK+H G+ H +K+Y
Sbjct: 1 MPKYYCDYCKSYLTHDTLSVRKSHLMGKNH---IKYY 34
>gi|344302819|gb|EGW33093.1| hypothetical protein SPAPADRAFT_137826 [Spathaspora passalidarum
NRRL Y-27907]
Length = 138
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFY 37
MPKYYCDYC +YLTHD+ SVRK+H G+ H +K+Y
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLMGKNH---IKYY 34
>gi|255719816|ref|XP_002556188.1| KLTH0H07106p [Lachancea thermotolerans]
gi|238942154|emb|CAR30326.1| KLTH0H07106p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MP++ CDYC +YLTHD+PSVRK+H G+ H YY + + + + + +A K
Sbjct: 1 MPRF-CDYCHSYLTHDTPSVRKSHLLGKNHVKLAADYYCNKARQTEKPIFEKSRSAKKNR 59
Query: 61 KIANNPFGNK 70
K A +P G +
Sbjct: 60 KRARSPRGQE 69
>gi|444315251|ref|XP_004178283.1| hypothetical protein TBLA_0A09810 [Tetrapisispora blattae CBS
6284]
gi|387511322|emb|CCH58764.1| hypothetical protein TBLA_0A09810 [Tetrapisispora blattae CBS
6284]
Length = 249
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYY------QKW---MEEQAQNLID 51
M +YYC+YC +YLTHD+ SVR +H G+ H V YY Q+W + + +I+
Sbjct: 1 MVRYYCEYCHSYLTHDTLSVRNSHLVGKNHIKMVADYYRNKSRPQRWPSAVSATSNTVIE 60
Query: 52 -ATTAAYKAGK 61
+TT+A GK
Sbjct: 61 PSTTSATATGK 71
>gi|367005881|ref|XP_003687672.1| hypothetical protein TPHA_0K01040 [Tetrapisispora phaffii CBS
4417]
gi|357525977|emb|CCE65238.1| hypothetical protein TPHA_0K01040 [Tetrapisispora phaffii CBS
4417]
Length = 155
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC YC++YLTHD+ SVR++H G+ H V YY+
Sbjct: 1 MARYYCVYCNSYLTHDTSSVRRSHLVGKHHVKAVADYYR 39
>gi|410074933|ref|XP_003955049.1| hypothetical protein KAFR_0A04790 [Kazachstania africana CBS
2517]
gi|372461631|emb|CCF55914.1| hypothetical protein KAFR_0A04790 [Kazachstania africana CBS
2517]
Length = 230
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKH-KDNVKFYYQKWME 43
M +YYC+YC +YLTHD+ SVRK+H G+ H K +Y K++E
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLKITADYYRNKYVE 44
>gi|448517199|ref|XP_003867736.1| hypothetical protein CORT_0B05900 [Candida orthopsilosis Co
90-125]
gi|380352075|emb|CCG22299.1| hypothetical protein CORT_0B05900 [Candida orthopsilosis]
Length = 146
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQN 48
MPKYYCDYC +YLTHD+ SVRK+H G+ H +K YY + E +A+
Sbjct: 1 MPKYYCDYCKSYLTHDTMSVRKSHLMGKHH---IK-YYCDYYEFKAKE 44
>gi|294878465|ref|XP_002768380.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
gi|239870748|gb|EER01098.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
Length = 126
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPKY+C+YCD +L H S RK H GRKH N YY + M+E+
Sbjct: 1 MPKYFCEYCDIFLAHSSFFGRKQHSTGRKHIQNKIDYYTEQMKEK 45
>gi|294885993|ref|XP_002771504.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
gi|239875208|gb|EER03320.1| U1 small nuclear ribonucleoprotein C, putative [Perkinsus marinus
ATCC 50983]
Length = 125
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
MPKY+C+YCD +L H S RK H GRKH N YY + M+E+
Sbjct: 1 MPKYFCEYCDIFLAHSSFFGRKQHSTGRKHIQNKIDYYTEQMKEK 45
>gi|66356784|ref|XP_625570.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226567|gb|EAK87555.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 198
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME 43
MPK+YCDYCD YLTH S + RK H GRKH +N +Y+ ++
Sbjct: 1 MPKFYCDYCDIYLTHSSTNGRKQHNLGRKHINNKIDHYKNVIK 43
>gi|209876129|ref|XP_002139507.1| U1 zinc finger domain-containing protein [Cryptosporidium muris
RN66]
gi|209555113|gb|EEA05158.1| U1 zinc finger domain-containing protein [Cryptosporidium muris
RN66]
Length = 136
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MPK+YCDYCD YLTH S R+ H GRKH +N +Y+ +++
Sbjct: 1 MPKFYCDYCDIYLTHSSTGGRRQHSLGRKHINNKIEFYRNLIKD 44
>gi|223996299|ref|XP_002287823.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976939|gb|EED95266.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 236
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP+++ DY +TYLTHDS + RK +G K ++N K +YQK +EE
Sbjct: 1 MPRFFDDYSNTYLTHDSAAGRKQQRRGWKFRENFKLHYQKNLEE 44
>gi|123409329|ref|XP_001303388.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|154421899|ref|XP_001583962.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|121884764|gb|EAX90458.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
gi|121918207|gb|EAY22976.1| U1 zinc finger family protein [Trichomonas vaginalis G3]
Length = 218
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKI 62
+ YC YCD YL H+S R+ H G KH V YY +++ E +N +T +
Sbjct: 5 RCYCPYCDVYLVHNSLRSRRDHLNGFKHLAAVSIYYHRFIPEVFKNGGFSTNETEDTSGL 64
Query: 63 ANNP 66
N P
Sbjct: 65 PNTP 68
>gi|367016913|ref|XP_003682955.1| hypothetical protein TDEL_0G03770 [Torulaspora delbrueckii]
gi|359750618|emb|CCE93744.1| hypothetical protein TDEL_0G03770 [Torulaspora delbrueckii]
Length = 191
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H V YY+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHLRIVADYYR 39
>gi|156840688|ref|XP_001643723.1| hypothetical protein Kpol_1009p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156114346|gb|EDO15865.1| hypothetical protein Kpol_1009p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 171
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVR++H G+ H V YY+
Sbjct: 1 MVRYYCEYCHSYLTHDTKSVRRSHLVGKNHLKAVADYYR 39
>gi|258573765|ref|XP_002541064.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901330|gb|EEP75731.1| predicted protein [Uncinocarpus reesii 1704]
Length = 222
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A G+ A NP
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAANP 50
>gi|315054963|ref|XP_003176856.1| hypothetical protein MGYG_00941 [Arthroderma gypseum CBS 118893]
gi|311338702|gb|EFQ97904.1| hypothetical protein MGYG_00941 [Arthroderma gypseum CBS 118893]
Length = 219
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H G+ H NV YYQ+ E+AQ++ID+ T++Y A G+ ++NP
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVIDSITSSYAAEGQASSNP 50
>gi|365990327|ref|XP_003671993.1| hypothetical protein NDAI_0I01810 [Naumovozyma dairenensis CBS
421]
gi|343770767|emb|CCD26750.1| hypothetical protein NDAI_0I01810 [Naumovozyma dairenensis CBS
421]
Length = 275
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLVGKNHIRITADYYR 39
>gi|254582184|ref|XP_002497077.1| ZYRO0D14894p [Zygosaccharomyces rouxii]
gi|238939969|emb|CAR28144.1| ZYRO0D14894p [Zygosaccharomyces rouxii]
Length = 202
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQ 47
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ ++Q++
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLRITADYYRNKGKKQSR 47
>gi|303312889|ref|XP_003066456.1| Formin 2, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106118|gb|EER24311.1| Formin 2, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 224
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A G+ A NP
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAANP 50
>gi|323332385|gb|EGA73794.1| Yhc1p [Saccharomyces cerevisiae AWRI796]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|365764117|gb|EHN05642.1| Yhc1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 231
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|259148279|emb|CAY81526.1| Yhc1p [Saccharomyces cerevisiae EC1118]
Length = 231
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|6323329|ref|NP_013401.1| Yhc1p [Saccharomyces cerevisiae S288c]
gi|3024590|sp|Q05900.1|RU1C_YEAST RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1
snRNP C; Short=U1-C; Short=U1C
gi|596051|gb|AAB67343.1| Ylr298cp [Saccharomyces cerevisiae]
gi|51012973|gb|AAT92780.1| YLR298C [Saccharomyces cerevisiae]
gi|151941002|gb|EDN59383.1| U1-C [Saccharomyces cerevisiae YJM789]
gi|190405354|gb|EDV08621.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256269830|gb|EEU05090.1| Yhc1p [Saccharomyces cerevisiae JAY291]
gi|285813712|tpg|DAA09608.1| TPA: Yhc1p [Saccharomyces cerevisiae S288c]
gi|392297802|gb|EIW08901.1| Yhc1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|323307947|gb|EGA61204.1| Yhc1p [Saccharomyces cerevisiae FostersO]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|207342864|gb|EDZ70497.1| YLR298Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|327351579|gb|EGE80436.1| hypothetical protein BDDG_03377 [Ajellomyces dermatitidis ATCC
18188]
Length = 234
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T +Y A G+ ++NP
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQEIGHEKAQSVIDSITNSYAAEGQASSNP 50
>gi|170092331|ref|XP_001877387.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647246|gb|EDR11490.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 365
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ---KWMEEQAQNLIDATTAAYKA 59
+Y+C YC+ Y+ D+PS R+ H G +HK NV+ + + K E+Q ++L + +
Sbjct: 10 RYFCKYCEIYIADDAPS-RQQHENGLRHKGNVERFIRGIYKSGEKQKKDLEEEKREMARV 68
Query: 60 GKIANNPFGNKGGAAIPPPSN 80
+ AN F GA I P++
Sbjct: 69 ERAANAAFAQDVGAGIAKPTS 89
>gi|323336351|gb|EGA77619.1| Yhc1p [Saccharomyces cerevisiae Vin13]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|323347372|gb|EGA81644.1| Yhc1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|323303829|gb|EGA57612.1| Yhc1p [Saccharomyces cerevisiae FostersB]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDIIN 47
>gi|401624503|gb|EJS42559.1| yhc1p [Saccharomyces arboricola H-6]
Length = 239
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR 39
>gi|366992972|ref|XP_003676251.1| hypothetical protein NCAS_0D03090 [Naumovozyma castellii CBS
4309]
gi|342302117|emb|CCC69890.1| hypothetical protein NCAS_0D03090 [Naumovozyma castellii CBS
4309]
Length = 244
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKSHLIGKNHLRITADYYR 39
>gi|349580002|dbj|GAA25163.1| K7_Yhc1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+ +A+++I+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR----NKARDVIN 47
>gi|119192358|ref|XP_001246785.1| predicted protein [Coccidioides immitis RS]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A G+ A NP
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAANP 50
>gi|365759319|gb|EHN01113.1| Yhc1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR 39
>gi|401840185|gb|EJT43090.1| YHC1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYK 39
>gi|378732333|gb|EHY58792.1| hypothetical protein HMPREF1120_06795 [Exophiala dermatitidis
NIH/UT8656]
Length = 185
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKIAN 64
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A AN
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAN 47
>gi|327308252|ref|XP_003238817.1| U1 snRNP complex component Yhc1 [Trichophyton rubrum CBS 118892]
gi|326459073|gb|EGD84526.1| U1 snRNP complex component Yhc1 [Trichophyton rubrum CBS 118892]
Length = 210
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H G+ H NV YYQ+ E+AQ++ID+ T++Y A G+ ++NP
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVIDSITSSYAAEGQASSNP 50
>gi|119499908|ref|XP_001266711.1| U1 small nuclear ribonucleoprotein C, putative [Neosartorya
fischeri NRRL 181]
gi|119414876|gb|EAW24814.1| U1 small nuclear ribonucleoprotein C, putative [Neosartorya
fischeri NRRL 181]
Length = 220
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAA 42
>gi|326470816|gb|EGD94825.1| U1 small nuclear ribonucleoprotein C [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H G+ H NV YYQ+ E+AQ++ID+ T++Y A G+ ++NP
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVIDSITSSYAAEGQASSNP 50
>gi|326478028|gb|EGE02038.1| hypothetical protein TEQG_01078 [Trichophyton equinum CBS 127.97]
Length = 209
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H G+ H NV YYQ+ E+AQ++ID+ T++Y A G+ ++NP
Sbjct: 2 SVRKAHNSGKNHLKNVVQYYQEIGHEKAQSVIDSITSSYAAEGQASSNP 50
>gi|219118939|ref|XP_002180236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408493|gb|EEC48427.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP+++ DY +TYLTHDS + RK +G K ++N K +Y+ ++ +
Sbjct: 1 MPRFFDDYSNTYLTHDSSAGRKQQRRGWKFRENFKLHYETYLTD 44
>gi|50302531|ref|XP_451200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640331|emb|CAH02788.1| KLLA0A04565p [Kluyveromyces lactis]
Length = 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M ++YC YC +YLTHD+ SVRK+H G+ H V YY+
Sbjct: 1 MVRFYCWYCKSYLTHDTASVRKSHLLGKNHIRLVADYYR 39
>gi|146323889|ref|XP_751496.2| U1 snRNP complex component Yhc1 [Aspergillus fumigatus Af293]
gi|129557485|gb|EAL89458.2| U1 snRNP complex component Yhc1, putative [Aspergillus fumigatus
Af293]
Length = 199
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAA 42
>gi|50289689|ref|XP_447276.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526586|emb|CAG60213.1| unnamed protein product [Candida glabrata]
Length = 223
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKH-KDNVKFYYQKWMEEQ 45
M +YYC+YC +YLTHD+ SVRK H G+ H + +Y + ++EQ
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKFHLMGKNHLRVRADYYRSQAIKEQ 46
>gi|50304949|ref|XP_452432.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641565|emb|CAH01283.1| KLLA0C05192p [Kluyveromyces lactis]
Length = 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
M ++YC YC +YLTHD+ SVRK+H G+ H V YY+
Sbjct: 1 MVRFYCWYCKSYLTHDTASVRKSHLLGKNHIRLVADYYR 39
>gi|67522989|ref|XP_659555.1| hypothetical protein AN1951.2 [Aspergillus nidulans FGSC A4]
gi|40745960|gb|EAA65116.1| hypothetical protein AN1951.2 [Aspergillus nidulans FGSC A4]
gi|259487310|tpe|CBF85883.1| TPA: U1 snRNP complex component Yhc1, putative (AFU_orthologue;
AFUA_4G13350) [Aspergillus nidulans FGSC A4]
Length = 219
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGQEKAQSVIDSITSSYAA 42
>gi|212535006|ref|XP_002147659.1| U1 snRNP complex component Yhc1, putative [Talaromyces marneffei
ATCC 18224]
gi|210070058|gb|EEA24148.1| U1 snRNP complex component Yhc1, putative [Talaromyces marneffei
ATCC 18224]
Length = 198
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKIAN 64
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A AN
Sbjct: 2 SVRKAHNAGRNHIRNVVDYYQQIGHEKAQSVIDSITSSYAAEGQAN 47
>gi|407921307|gb|EKG14458.1| Zinc finger U1-C type protein [Macrophomina phaseolina MS6]
Length = 200
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNSGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAA 42
>gi|115389784|ref|XP_001212397.1| predicted protein [Aspergillus terreus NIH2624]
gi|114194793|gb|EAU36493.1| predicted protein [Aspergillus terreus NIH2624]
Length = 196
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A G+ NP
Sbjct: 2 SVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVIDSITSSYAAEGQAVPNP 50
>gi|300123751|emb|CBK25023.2| unnamed protein product [Blastocystis hominis]
Length = 59
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME 43
MP+YYCDYC +Y+ +DS RK H +G KH++ V +Y+K E
Sbjct: 1 MPRYYCDYCKSYIKNDSARSRKEHIRGAKHRECVVEHYKKVFE 43
>gi|346974893|gb|EGY18345.1| hypothetical protein VDAG_08679 [Verticillium dahliae VdLs.17]
Length = 179
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV +YYQ+ E+AQ++ID+ T++Y A G+ NP
Sbjct: 2 SVRKAHNSGRNHLRNVVYYYQQIGHEKAQSVIDSITSSYAAEGQAHANP 50
>gi|242791795|ref|XP_002481826.1| U1 snRNP complex component Yhc1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218718414|gb|EED17834.1| U1 snRNP complex component Yhc1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 185
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAGKIAN 64
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A AN
Sbjct: 2 SVRKAHNAGRNHIRNVVDYYQQIGHEKAQSVIDSITSSYAAEGQAN 47
>gi|397605149|gb|EJK58905.1| hypothetical protein THAOC_20939 [Thalassiosira oceanica]
Length = 152
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP+++ DY +TYLTHDS + RK +G K ++N K +Y+ + E
Sbjct: 1 MPRFFDDYSNTYLTHDSAAGRKQQRRGWKFRENFKLHYEAHLAE 44
>gi|403412382|emb|CCL99082.1| predicted protein [Fibroporia radiculosa]
Length = 350
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ---KWMEEQAQNLIDATTAAYKA 59
KY+C YC+ Y+ D+PS RK H G +HK NV+ + + K E + Q+ + +
Sbjct: 10 KYFCKYCNIYIADDAPS-RKQHESGLRHKGNVERFVRGLYKEGERRKQDREEEKRDMARI 68
Query: 60 GKIANNPFGNKGGAAIPPPSNLSS 83
+ AN F GA + P + SS
Sbjct: 69 EQAANAAFARDVGAGLVRPGSGSS 92
>gi|358365365|dbj|GAA81987.1| hypothetical protein AKAW_00102 [Aspergillus kawachii IFO 4308]
Length = 172
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A G+ NP
Sbjct: 2 SVRKAHNAGRNHLRNVLEYYQQIGQEKAQSVIDSITSSYAAEGQAVPNP 50
>gi|425768774|gb|EKV07290.1| hypothetical protein PDIG_73650 [Penicillium digitatum PHI26]
gi|425776134|gb|EKV14368.1| hypothetical protein PDIP_44120 [Penicillium digitatum Pd1]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGQEKAQSVIDSITSSYAA 42
>gi|384484141|gb|EIE76321.1| hypothetical protein RO3G_01025 [Rhizopus delemar RA 99-880]
Length = 151
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 32/93 (34%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
MPKYYC SVRK H G+ H NV+ YY + +++AQ +ID T AY+
Sbjct: 1 MPKYYC-----------ASVRKAHNAGKNHILNVRNYYAEISQDKAQAIIDEITRAYE-- 47
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPP 93
N S+++PP+ G P
Sbjct: 48 -------------------NASAVLPPQYAGYP 61
>gi|403347521|gb|EJY73186.1| U1 zinc finger family protein [Oxytricha trifallax]
Length = 138
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEE 44
MP +YC+YC +L H SP RK H +G+KH+ N YY +++ E
Sbjct: 1 MPNFYCEYCGIFLKHSSPFGRKQHSRGKKHQFNKIEYYSQFLIE 44
>gi|302421744|ref|XP_003008702.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261351848|gb|EEY14276.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 179
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A G+ NP
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAEGQAHANP 50
>gi|346324162|gb|EGX93759.1| U1 small nuclear ribonucleoprotein C, putative [Cordyceps
militaris CM01]
Length = 181
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA-GKIANNP 66
SVRK H GR H NV YYQ+ E+AQ++ID+ T++Y A G+ NP
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAEGQAHANP 50
>gi|401827623|ref|XP_003888104.1| U1 snRNP-specific protein C [Encephalitozoon hellem ATCC 50504]
gi|392999304|gb|AFM99123.1| U1 snRNP-specific protein C [Encephalitozoon hellem ATCC 50504]
Length = 124
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME 43
MPKY+C++C+ L +D R+TH QG KHK K YY + E
Sbjct: 1 MPKYFCEFCNKTLLNDKLRSRRTHFQGAKHKLMRKAYYMEVFE 43
>gi|213408669|ref|XP_002175105.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212003152|gb|EEB08812.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 189
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 12 YLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAA 56
+LTHDS SVRK H GR H NV+ YY + +E+AQ + +++
Sbjct: 49 WLTHDSQSVRKAHNAGRAHLQNVQDYYARVAQEEAQKRLSEMSSS 93
>gi|345562104|gb|EGX45176.1| hypothetical protein AOL_s00173g277 [Arthrobotrys oligospora ATCC
24927]
Length = 282
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 20 VRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
VRK H GR H NV YYQ+ +E+AQ++ID T +Y A
Sbjct: 66 VRKAHNNGRNHIRNVVEYYQQIGQERAQSVIDTITNSYAA 105
>gi|46137243|ref|XP_390313.1| hypothetical protein FG10137.1 [Gibberella zeae PH-1]
Length = 178
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKA 59
SVRK H GR H NV YY++ E+AQ++ID+ T++Y A
Sbjct: 2 SVRKAHNSGRNHLRNVVDYYEQIGHEKAQSVIDSITSSYAA 42
>gi|169846694|ref|XP_001830061.1| hypothetical protein CC1G_04494 [Coprinopsis cinerea
okayama7#130]
gi|116508831|gb|EAU91726.1| hypothetical protein CC1G_04494 [Coprinopsis cinerea
okayama7#130]
Length = 369
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ---KWMEEQAQNLIDATTAAYKA 59
KY+C YC+ Y+ D+PS R+ H G +HK N++ Y + K E++ ++L + +
Sbjct: 10 KYFCKYCEIYIADDAPS-RQHHENGMRHKGNLERYIRGIYKTGEKRKKDLEEEKREMAQI 68
Query: 60 GKIANNPFGNKGGAAI 75
+ AN F G+ +
Sbjct: 69 ERAANAAFAQDIGSGV 84
>gi|294461500|gb|ADE76311.1| unknown [Picea sitchensis]
Length = 126
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
+ KYYCDYCD D+PS RK H QG +H+ K ++ + + Q A AG
Sbjct: 3 LEKYYCDYCDKQFQ-DTPSARKRHLQGVQHQRARKLWFDSFKDPQ-------QLHAENAG 54
Query: 61 KIANNPFGNKGGAAIPPPSNLSSLMPPRQVGPPPGMQQG 99
K F G N P + + G+ G
Sbjct: 55 KAICTRFVKTGFCQF--GDNCKYFHPVQNIEQHAGVHSG 91
>gi|67482081|ref|XP_656390.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56473586|gb|EAL51005.1| hypothetical protein EHI_153250 [Entamoeba histolytica HM-1:IMSS]
gi|407037170|gb|EKE38531.1| U1 zinc finger protein [Entamoeba nuttalli P19]
gi|449705176|gb|EMD45279.1| putative U1 zinc finger protein [Entamoeba histolytica KU27]
Length = 96
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 2 PKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLIDATTAAYKAG 60
+YYC+YC +L + RK H G+KHKD + Y++++ Q +ID Y+
Sbjct: 4 KRYYCEYCQKHLVYGGTRSRKEHILGKKHKDKMVEYFKQFEANILQRMIDMVVLDYQTN 62
>gi|440492093|gb|ELQ74690.1| hypothetical protein THOM_2377, partial [Trachipleistophora
hominis]
Length = 121
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME--EQAQNLIDATTAAYK 58
MPKY+C +CD L + RKTH G+KHK K YY + +E E + L D +
Sbjct: 6 MPKYFCPFCDISLPNSLYRSRKTHISGKKHKLLKKAYYLELLENKEVRKTLFDKIDKSLL 65
Query: 59 AGKIANNP 66
+I P
Sbjct: 66 VKRIFTMP 73
>gi|294794411|ref|ZP_06759547.1| DNA polymerase III, gamma and tau subunits [Veillonella sp. 3_1_44]
gi|294454741|gb|EFG23114.1| DNA polymerase III, gamma and tau subunits [Veillonella sp. 3_1_44]
Length = 892
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 14/71 (19%)
Query: 69 NKGGAAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGMNPGMMGMR 128
N G +PPPS++ + PP VG PPP PG PP MN +GM P
Sbjct: 438 NTAGDTVPPPSSVGMIPPPASVG------MTPPPMGAPGSTPPPMN--GVGMAP------ 483
Query: 129 PMMGGMGGMGP 139
P MGG+G + P
Sbjct: 484 PPMGGVGMVPP 494
>gi|429964003|gb|ELA46001.1| hypothetical protein VCUG_02512 [Vavraia culicis 'floridensis']
Length = 116
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME-----EQAQNLIDATTA 55
MPKY+C +CD L + +RKTH G+KHK + YY + +E ++ N ID +
Sbjct: 1 MPKYFCPFCDISLPNSLYRLRKTHINGKKHKLMRRAYYLELLENKDVRKELFNKIDKSLM 60
Query: 56 AYKA 59
+A
Sbjct: 61 VKRA 64
>gi|336371737|gb|EGO00077.1| hypothetical protein SERLA73DRAFT_180487 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384491|gb|EGO25639.1| hypothetical protein SERLADRAFT_466108 [Serpula lacrymans var.
lacrymans S7.9]
Length = 345
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ---KWMEEQAQNLIDATTAAYKA 59
KY+C YC+ Y+ D+PS R+ H G +H+ N + + + K E++ ++L + +
Sbjct: 10 KYFCKYCEIYIADDAPS-RQHHESGLRHQGNKERFVRGLYKTGEKRKKDLEEEKREMDRI 68
Query: 60 GKIANNPFGNKGGA 73
GK A F GA
Sbjct: 69 GKAAQAAFAQDVGA 82
>gi|395333150|gb|EJF65528.1| hypothetical protein DICSQDRAFT_13523, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 235
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ---KWMEEQAQNLIDATTAAYKA 59
KY C YC+ Y+ D+PS R+ H G +HK NV+ + + K E++ Q+L + +
Sbjct: 10 KYLCKYCNIYIADDAPS-RRQHETGLRHKGNVERFVRGLYKAGEKRKQDLEEEKREIARI 68
Query: 60 GKIANNPFG 68
K AN +
Sbjct: 69 EKAANAAYA 77
>gi|19074638|ref|NP_586144.1| U1 SMALL NUCLEAR RIBONUCLEOPROTEIN (U1snRNP) [Encephalitozoon
cuniculi GB-M1]
gi|19069280|emb|CAD25748.1| U1 SMALL NUCLEAR RIBONUCLEOPROTEIN (U1snRNP) [Encephalitozoon
cuniculi GB-M1]
gi|449330237|gb|AGE96498.1| U1 small nuclear ribonucleoprotein [Encephalitozoon cuniculi]
Length = 122
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWME------EQAQNLIDATT 54
MP+Y+C++C+ L +D R+ HC G KH K YY + E E A L D T
Sbjct: 1 MPRYFCEFCNKMLLNDRLRSRRMHCGGAKHGLMRKAYYMEMFEKEDIAAEMASILRDIKT 60
Query: 55 AAYKA 59
A K
Sbjct: 61 AGEKV 65
>gi|351726504|ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max]
gi|255631776|gb|ACU16255.1| unknown [Glycine max]
Length = 127
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
KYYCDYCD L D+P+ RK H QG +H +Y + ++Q
Sbjct: 5 KYYCDYCDK-LFQDTPADRKRHVQGIQHHQAKARWYDSFKQQQ 46
>gi|389741730|gb|EIM82918.1| hypothetical protein STEHIDRAFT_102376 [Stereum hirsutum FP-91666
SS1]
Length = 370
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 3 KYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQ 39
+Y+C YCD Y+T D+PS R+ H G +H+ N + + +
Sbjct: 10 RYFCKYCDIYITDDAPS-RQQHENGLRHQGNKERFVR 45
>gi|348681445|gb|EGZ21261.1| hypothetical protein PHYSODRAFT_497071 [Phytophthora sojae]
Length = 360
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 14/70 (20%)
Query: 2 PKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYY-------------QKWMEEQAQN 48
++YC YC+ ++ D S+ K H QGR+HK+ V+ + QK + +Q Q
Sbjct: 9 ERHYCKYCNVWMQSDKLSI-KHHEQGRRHKEKVEETFKAKRQTKSDASSAQKELRDQLQQ 67
Query: 49 LIDATTAAYK 58
+ +A A Y+
Sbjct: 68 IEEAAQAKYE 77
>gi|348684755|gb|EGZ24570.1| hypothetical protein PHYSODRAFT_325680 [Phytophthora sojae]
Length = 111
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 PKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
P++ C YC+ DS R+ H +GR HK NVK +Y + +++
Sbjct: 4 PRFVCAYCNKSFE-DSQEARQRHNRGRNHKANVKLWYDSFADQE 46
>gi|159482150|ref|XP_001699136.1| hypothetical protein CHLREDRAFT_193520 [Chlamydomonas reinhardtii]
gi|158273199|gb|EDO98991.1| predicted protein [Chlamydomonas reinhardtii]
Length = 3962
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 73 AAIPPPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGMNPGMM 125
A+P P MP + G PGMQ G PGM PG MP M G+ PG M
Sbjct: 3854 GALPTPGQQPG-MPGQVPGQVPGMQPGQMPGMQPGQMPGMQPGQMPGVQPGQM 3905
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 77 PPSNLSSLMPPRQVGPPPGMQQGPPPGMMPGMMPPGMNMMMMGMNPGMM-GMRP 129
PP +L P Q PG G PGM PG MP M GM PG M G++P
Sbjct: 3849 PPMMPGALPTPGQQPGMPGQVPGQVPGMQPGQMPGMQPGQMPGMQPGQMPGVQP 3902
>gi|298705371|emb|CBJ28661.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 400
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 PKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQ 45
+Y+C YC +L++ S+R H QG+KH + V +++K E++
Sbjct: 9 ERYFCKYCKVWLSNHQASIR-NHDQGKKHIEIVAEFFRKKREDK 51
>gi|238504236|ref|XP_002383349.1| U1 snRNP complex component Yhc1, putative [Aspergillus flavus
NRRL3357]
gi|220690820|gb|EED47169.1| U1 snRNP complex component Yhc1, putative [Aspergillus flavus
NRRL3357]
Length = 236
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 21/62 (33%)
Query: 19 SVRKTHCQGRKHKDNVKFYYQKWM---------------------EEQAQNLIDATTAAY 57
SVRK H GR H NV YYQ+ +E+AQ++ID+ T++Y
Sbjct: 2 SVRKAHNAGRNHLRNVLEYYQRTFQLRRLPRLTQSNAHQPHTEIGQEKAQSVIDSITSSY 61
Query: 58 KA 59
A
Sbjct: 62 AA 63
>gi|301121612|ref|XP_002908533.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103564|gb|EEY61616.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 359
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 PKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNV 34
++YC YC+ ++ D S+ K H QGR+HK+ V
Sbjct: 9 ERHYCKYCNVWMQSDRVSI-KHHEQGRRHKEKV 40
>gi|16330376|ref|NP_441104.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|383322117|ref|YP_005382970.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325286|ref|YP_005386139.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491170|ref|YP_005408846.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436437|ref|YP_005651161.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|451814534|ref|YP_007450986.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|1652866|dbj|BAA17784.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|339273469|dbj|BAK49956.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|359271436|dbj|BAL28955.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274606|dbj|BAL32124.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277776|dbj|BAL35293.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958296|dbj|BAM51536.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|451780503|gb|AGF51472.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
Length = 649
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 46 AQNLIDATTAAYKAGKI-ANNP-FGNKGG----AAIPPPSNLSSLMPPRQVGPPPGMQQG 99
A LI TTA+ G + ANNP GN G A PPP+N + PP PP G
Sbjct: 409 ALELISDTTASRPTGNLPANNPPRGNSGDQISIAVQPPPANATPSFPPEWSNPPAGNLPS 468
Query: 100 PPPGMMPGMMPPGMNMMMMGMNPGMMGMR 128
P G ++ PG G +PG +G+R
Sbjct: 469 VPRGGRLVVVDPGHG----GKDPGAIGIR 493
>gi|119624200|gb|EAX03795.1| small nuclear ribonucleoprotein polypeptide C, isoform CRA_a
[Homo sapiens]
Length = 137
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 19/21 (90%)
Query: 42 MEEQAQNLIDATTAAYKAGKI 62
MEEQAQ+LID TTAA++ GKI
Sbjct: 1 MEEQAQSLIDKTTAAFQQGKI 21
>gi|168055789|ref|XP_001779906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668719|gb|EDQ55321.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 18 PSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID 51
PSVRK HC G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 3 PSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLID 36
>gi|290988211|ref|XP_002676815.1| FH2 domain-containing protein [Naegleria gruberi]
gi|284090419|gb|EFC44071.1| FH2 domain-containing protein [Naegleria gruberi]
Length = 1344
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 93 PPGMQQGP--PPGMMPGMMPPGMNMMMMGMNPGMMGMRPMMGGMGGMGPMM 141
PPGM G PPGM MPPGM + + PG+ P + G+ GM PMM
Sbjct: 798 PPGMGGGVPMPPGMGGVPMPPGMGIPGVPSVPGI----PGVPGVPGM-PMM 843
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,371,882,293
Number of Sequences: 23463169
Number of extensions: 162155406
Number of successful extensions: 1253501
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 12045
Number of HSP's that attempted gapping in prelim test: 976759
Number of HSP's gapped (non-prelim): 204574
length of query: 164
length of database: 8,064,228,071
effective HSP length: 125
effective length of query: 39
effective length of database: 9,426,299,242
effective search space: 367625670438
effective search space used: 367625670438
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)