BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6570
(713 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 282 bits (722), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 264/546 (48%), Gaps = 81/546 (14%)
Query: 22 LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81
+S L PRG+AVDWV N+YWTD+G + I V+ ++G ++TL++ ++EP+ I ++P
Sbjct: 3953 ISGLKMPRGIAVDWVAGNIYWTDSG---RDVIEVAQMKGENRKTLISGMIDEPHAIVVDP 4009
Query: 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIE 141
L G M+W++ G P+I A++DG + LV +NIQWPTG+ +DY ++RLYWAD K I
Sbjct: 4010 LRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIG 4069
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNL 201
SI LNG D V + P+ +++FED +Y TY N I KI+KFG+ L + L
Sbjct: 4070 SIRLNGTDPVVAIDNKKGLSHPFSIDIFEDYIYGVTYINNRIFKIHKFGHKSVTNLTSGL 4129
Query: 202 NRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMS 261
N A+DV++ + KQ VTN CD K C LC+ PS C CP
Sbjct: 4130 NHATDVVLYHQYKQPE-VTNPCDRKKCEW--LCLLSPSGPVCTCP--------------- 4171
Query: 262 CKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDC-NHGT 320
+G + TC+ + S S V TC L C N G+
Sbjct: 4172 --------------NGKRLDNGTCVL---------IPSPTASAVVPTTDTCDLVCLNGGS 4208
Query: 321 CEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGA 380
C + C CQ + G C+ +N C N G+C P C C +TG+
Sbjct: 4209 CFLNARKQAKCRCQPRYNGERCQ-INQCSDYCQNGGLC---TASPSGMPTCRCPTGFTGS 4264
Query: 381 RCESRICENKCHNGGTCI---ATTQTCVCPPGFTGDTC--QQCLNLKCQNGGVCVNKTTG 435
RC+ ++C N CHN G+C C CPP F GD C QQC N C+N GVC G
Sbjct: 4265 RCDQQVCTNYCHNNGSCTVNQGNQPNCRCPPTFIGDRCQYQQCFNY-CENNGVCQMSRDG 4323
Query: 436 L-ECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSG 494
+ +C CP + G CQ ++C C G+C+I +C C +G
Sbjct: 4324 VKQCRCPPQFEGAQCQDNKCSR-CQEGKCNINRQSGDV------------SCICPDGKIA 4370
Query: 495 PKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNV--CKCPSQYTGRRC-ECAVGDTSCASL 551
P C+ Y CLNGGTC + K + C CP + TG RC E VG+
Sbjct: 4371 PSCLTCDSY---------CLNGGTCSISDKTQLPECLCPLEVTGMRCEEFIVGEQQSGRT 4421
Query: 552 ANKCTP 557
A+ P
Sbjct: 4422 ASIVIP 4427
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 8/226 (3%)
Query: 23 SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82
+ L +P G+AVDWVG NLYW D G + I VS L G + L+N+GL EP + ++
Sbjct: 3096 TGLSNPDGLAVDWVGGNLYWCDKG---RDTIEVSKLNGAYRTVLVNSGLREPRALVVDVQ 3152
Query: 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIES 142
+G ++WT+ G I +DG N+ +VD I WP G+T+DY + R+YWAD + IE
Sbjct: 3153 NGYLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEF 3212
Query: 143 INLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLN 202
+L+G +R V ++D + + L +FED +Y++ + T +I + +K ++ +L + L+
Sbjct: 3213 ASLDGSNRHTVL-SQDIPHI-FALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLH 3270
Query: 203 RASDVLILQENKQAHNVTNH-CDDKPCHQSALCINLP-SSHTCLCP 246
R D+ I +Q +V NH C S LC+ P H C CP
Sbjct: 3271 RPMDIHIYHPYRQP-DVPNHPCKTNNAGCSNLCLLSPGGGHKCACP 3315
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 26/297 (8%)
Query: 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
++R KR+ + V + + G+AVDW+ N+YWTD G + I V+ L G + +
Sbjct: 1942 ISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQG---FDVIEVARLNGSFRYVV 1998
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
++ GL++P I + P G +FWTE G PRI + +DG + LV+ +I WP GI++DY
Sbjct: 1999 ISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERMVLVNVSISWPNGISVDYE 2058
Query: 127 SQRLYWADPKARTIESINLN-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFS--TYRTNNI 183
+LYW D + IE I+L G++R VV +++ + + VFED +Y+S T+ +I
Sbjct: 2059 DGKLYWCDARTDKIERIDLETGENREVVLSSDN--MDMFSVSVFEDYIYWSDRTHANGSI 2116
Query: 184 LKINKFGNSDFNVLANNLN-RASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHT 242
+ +K ++ L + + D+ + +Q ++ C Q L T
Sbjct: 2117 KRGSKDNATESVSLRTGIGVQLKDIKVFNRARQKGTNVCAQNNGGCQQLCL-FRGGGRRT 2175
Query: 243 CLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTS 299
C C + E V SC+ Y S T L HL++E N+ +
Sbjct: 2176 CACAHGMLSEDGV-----SCRDYDGYLLY---------SERTILKSIHLSDENNLNA 2218
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I + +RE LK +H+ G+AVDW+G NLYWTD G + + ++ + +
Sbjct: 585 IGRQKIDGTERETILK---DGIHNVEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTR 641
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------RISGASIDGKNK-FNLVDNNIQ 116
+TL+ + P I ++PL+G M+WT+ P +I A +DG N+ + +
Sbjct: 642 KTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSKRGKIERAWMDGSNRNVFITSKTVL 701
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
WP G+++D P++ LYW D IE + LNG +R +VY + + + L + L+++
Sbjct: 702 WPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVYEGPELNHA-FGLCHYSSFLFWT 760
Query: 177 TYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCIN 236
YR+ +I ++++ +S L N + + + +Q +N C S+LC+
Sbjct: 761 EYRSGSIYRLDQ--SSKAVSLLRNERPPIFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLA 818
Query: 237 LPSSHTCLCPDHLTEELNVTSGKMSCKVAPA 267
P C C E+ + + ++C+ P+
Sbjct: 819 TPRGRQCAC----AEDQILGADSVTCEANPS 845
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84
L P G+AVDW+ N+YW ++ + + I V+ L+G + TLL + P IAL+P G
Sbjct: 1341 LATPEGLAVDWIAGNIYWVES---NLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYG 1397
Query: 85 RMFWTELGIK-PRISGASIDGKNKFNLVDNNIQ--WPTGITIDYPSQRLYWADPKARTIE 141
+FWT+ PRI AS+ G + + WP G+T+DY +R+ W D ++ I
Sbjct: 1398 ILFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1457
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNL 201
S +G V + P+ + ++ +Y++ +RTN + K NK+ + V+
Sbjct: 1458 SALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1517
Query: 202 NRASDVLILQENKQAHNVTNHCDDK----PCHQSALC-INLPSSHTCLCPDHLTE 251
+ D+ + ++Q N C+ PC S LC IN + +C CP HL +
Sbjct: 1518 TQPFDLQVYHPSRQPL-APNPCEANGGKGPC--SHLCLINYNRTLSCACP-HLMK 1568
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 24/253 (9%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
N+ E ++ LS LH +A+DW+ N Y+ D + I V G TLL
Sbjct: 265 NLKGFVEERSINISLS-LHQVEQMAIDWLTGNFYFVDD---IDDRIFVCNKNGLTCVTLL 320
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ L P IAL+P G++F+T+ G P++ +DG+N+ LVD+ I +P GIT+D S
Sbjct: 321 DLELYNPKGIALDPAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVS 380
Query: 128 QRLYWADPKARTIESINLNGKDRFVVYHTEDNGY---KPYKLEVFEDNLYFSTYRTNN-- 182
+ +YWAD IE ++ GK+R HT G Y L VFE+ LY + N
Sbjct: 381 RLVYWADAYLDYIEVVDYEGKNR----HTIIQGILIEHLYGLTVFENYLYATNSDNANAQ 436
Query: 183 ----ILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCD----DKPCHQSALC 234
++++N+F ++++ V+ +++ + I + +Q ++ C+ KP S +C
Sbjct: 437 QKTSVIRVNRFNSTEYQVVT-RVDKGGALHIYHQRRQPTVRSHACEPDQFGKPGGCSDIC 495
Query: 235 I--NLPSSHTCLC 245
+ N S TC C
Sbjct: 496 LLGNSHKSRTCRC 508
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 17/250 (6%)
Query: 18 LKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
++TV+S +L + G++VDWV +NL+WT + + I V+ L+G K ++ GL++P+
Sbjct: 1647 VETVVSADLPNAHGLSVDWVSRNLFWT-SYDTNKKQINVARLDGSFKNAVIQ-GLDKPHC 1704
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ + PL G+++WT+ IS A++DG N+ L+ N + P G+ IDYP +LYW
Sbjct: 1705 LVVHPLHGKLYWTD---GDNISVANMDGSNR-TLLFTNQRGPVGLAIDYPESKLYWISSG 1760
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
TI NL+G D V+ + K L + D L+++ + + NK ++ V
Sbjct: 1761 NGTINRCNLDGSDLEVIVAVKSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTV 1820
Query: 197 LANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHT---CLCPDHLTEEL 253
L N+ + + E+ Q +N C S LC LP+S T C+C T
Sbjct: 1821 LRNSTTLVMLMKVYDESIQQAG-SNPCSVNNGDCSQLC--LPTSETSRSCMC----TAGY 1873
Query: 254 NVTSGKMSCK 263
++ SG+ SC+
Sbjct: 1874 SLKSGQQSCE 1883
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 139/312 (44%), Gaps = 86/312 (27%)
Query: 463 CSITDSGPKCMC---------------SPGYSG--KKCDTC--TCLNGDS-------GPK 496
C ++ SGP C C SP S DTC CLNG S K
Sbjct: 4159 CLLSPSGPVCTCPNGKRLDNGTCVLIPSPTASAVVPTTDTCDLVCLNGGSCFLNARKQAK 4218
Query: 497 CMCSPGYSGKKC--DTCT--CLNGGTCIPN-SKNNVCKCPSQYTGRRCECAVGDTSCASL 551
C C P Y+G++C + C+ C NGG C + S C+CP+ +TG RC+ V
Sbjct: 4219 CRCQPRYNGERCQINQCSDYCQNGGLCTASPSGMPTCRCPTGFTGSRCDQQV-------- 4270
Query: 552 ANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQ 610
CT NYC NNG+C + +G +P+C+C P + G +C ++ C NYC+N G+C S+
Sbjct: 4271 ---CT-NYCHNNGSCTVNQGNQPNCRCPPTFIGDRCQYQQ----CFNYCENNGVCQMSRD 4322
Query: 611 GKPVCTCVNGWSGITCSER--------------------------------VSCAHFCFN 638
G C C + G C + ++C +C N
Sbjct: 4323 GVKQCRCPPQFEGAQCQDNKCSRCQEGKCNINRQSGDVSCICPDGKIAPSCLTCDSYCLN 4382
Query: 639 GGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKKQSYVNSHISSILILILLLIT 698
GGTC D P C+CP G+RC+ + + ++QS + I ++L+LLL+
Sbjct: 4383 GGTCSIS----DKTQLPECLCPLEVTGMRCEEFI--VGEQQSGRTASIVIPILLLLLLLA 4436
Query: 699 VGGIGYYIFRIK 710
V +Y +RIK
Sbjct: 4437 VVAFAWYKWRIK 4448
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 147/334 (44%), Gaps = 27/334 (8%)
Query: 2 ASISSGNVTRVKRE-MNLKTVLSNLHDPRGVAVDWVGKNLYWTD--AGGRSSNNIMVSTL 58
+ I GN+ ++ + +T++ N+ G+A LYWT + + + S L
Sbjct: 2252 SDIHFGNIQQINDDGTGRRTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRL 2311
Query: 59 EGRKKRTLLN-TGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQ 116
++ T++ +G + P L+ MFWT + P I A++ G N ++D +I+
Sbjct: 2312 GAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRATLSGANVLIIIDQDIR 2371
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ ID+ ++++Y++D IE +G R V+ +E P+ L V+ D ++++
Sbjct: 2372 TPNGLAIDHRAEKIYFSDATLDKIERCEYDGSHRHVILKSE--PVHPFGLAVYGDYIFWT 2429
Query: 177 TYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQS----- 231
+ + + NK+ +D +L ++ + +I N T+ C+ PC +
Sbjct: 2430 DWVRRAVQRANKYVGTDMKLLRVDIPQQPMGIIAVAND-----TDSCELSPCRVNNGGCQ 2484
Query: 232 ALCINLPSSH---TCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGN-LPSSHTCLC 287
LC+ P H +C L E+ + +C V +C +G+ + S TC
Sbjct: 2485 DLCLLTPKGHVNCSCRGERVLQEDFTCKALNSTCNVHDE----FECGNGDCIDFSRTCDG 2540
Query: 288 PDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTC 321
H ++ + + C + +L C +G C
Sbjct: 2541 VVHCKDKSD--EKQSYCSSRKCKKGFLHCMNGRC 2572
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 19 KTVLSN--LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
+TVL N L +PR + VD LYWTD G S I ++G + +++T + P
Sbjct: 3133 RTVLVNSGLREPRALVVDVQNGYLYWTDWGDHSL--IGKIGMDGTNRSVIVDTKITWPNG 3190
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ L+ ++ R++W + + I AS+DG N+ ++ +I P + +YW D +
Sbjct: 3191 LTLDYINSRIYWAD-AREDYIEFASLDGSNRHTVLSQDI--PHIFALTLFEDYIYWTDWE 3247
Query: 137 ARTI 140
++I
Sbjct: 3248 TKSI 3251
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGITI 123
TLL GLN + + ++WT++ + I I+G N L + P G+ +
Sbjct: 3047 TLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNVQVLHRTGLSNPDGLAV 3106
Query: 124 DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
D+ LYW D TIE LNG R V+ ++ + ++V LY++ + +++
Sbjct: 3107 DWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDVQNGYLYWTDWGDHSL 3166
Query: 184 L 184
+
Sbjct: 3167 I 3167
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
T + D QR+YW+D + +TI+ +NG V + ++ NL++++Y
Sbjct: 1616 TVVDYDAVEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLSVDWVSRNLFWTSY 1675
Query: 179 RTN-NILKINKFGNSDFNVLANNLNR 203
TN + + + S N + L++
Sbjct: 1676 DTNKKQINVARLDGSFKNAVIQGLDK 1701
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 255/541 (47%), Gaps = 82/541 (15%)
Query: 11 RVKREMNLKTV---LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
R +R+++ +S L PRG+A+DWV N+YWTD+G + I V+ ++G ++TL+
Sbjct: 3940 RHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSG---RDVIEVAQMKGENRKTLI 3996
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ ++EP+ I ++PL G M+W++ G P+I A++DG + LV +NIQWPTG+ +DY +
Sbjct: 3997 SGMIDEPHAIVVDPLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHN 4056
Query: 128 QRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKIN 187
+RLYWAD K I SI LNG D V ++ P+ ++VFED +Y TY N + KI+
Sbjct: 4057 ERLYWADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIH 4116
Query: 188 KFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPD 247
KFG+S L L+ ASDV++ ++KQ VTN CD K C LC+ PS C CP+
Sbjct: 4117 KFGHSPLVNLTGGLSHASDVVLYHQHKQPE-VTNPCDRKKCEW--LCLLSPSGPVCTCPN 4173
Query: 248 HLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVA 307
G + TC + V S
Sbjct: 4174 -----------------------------GKRLDNGTC---------VPVPSPTPPPDAP 4195
Query: 308 PARTCYLDC-NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPE 366
TC L C N G+C + P C CQ + G CE ++ C N G C P
Sbjct: 4196 RPGTCNLQCFNGGSCFLNARRQPKCRCQPRYTGDKCE-LDQCWEHCRNGGTC---AASPS 4251
Query: 367 PTYKCHCAPSYTGARCESRICENKCHNGGTCI---ATTQTCVCPPGFTGDTCQ--QCLNL 421
C C +TG +C ++C C N TC C C PGF GD CQ QC
Sbjct: 4252 GMPTCRCPTGFTGPKCTQQVCAGYCANNSTCTVNQGNQPQCRCLPGFLGDRCQYRQCSGY 4311
Query: 422 KCQNGGVCVNKTTG-LECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSG 480
C+N G C G +C C ++ G C+ ++C C+ G C +
Sbjct: 4312 -CENFGTCQMAADGSRQCRCTAYFEGSRCEVNKCSR-CLEGACVVNKQSGDV-------- 4361
Query: 481 KKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNN-VCKCPSQYTGRRC 539
TC C +G P C+ G+ C NGG+C NSK C+CP TG RC
Sbjct: 4362 ----TCNCTDGRVAPSCLTCVGH---------CSNGGSCTMNSKMMPECQCPPHMTGPRC 4408
Query: 540 E 540
E
Sbjct: 4409 E 4409
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 130/230 (56%), Gaps = 16/230 (6%)
Query: 23 SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82
+ L +P G+AVDWVG NLYW D G + I VS L G + L+++GL EP + ++
Sbjct: 3099 TGLSNPDGLAVDWVGGNLYWCDKG---RDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQ 3155
Query: 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIES 142
+G ++WT+ G I +DG ++ +VD I WP G+T+DY ++R+YWAD + IE
Sbjct: 3156 NGYLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEF 3215
Query: 143 INLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLN 202
+L+G +R VV ++D + + L +FED +Y++ + T +I + +K ++ +L + L+
Sbjct: 3216 ASLDGSNRHVVL-SQDIPHI-FALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLISTLH 3273
Query: 203 RASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCINLP-SSHTCLCP 246
R D+ + +Q +V NH PC S LC+ P H C CP
Sbjct: 3274 RPMDLHVFHALRQP-DVPNH----PCKVNNGGCSNLCLLSPGGGHKCACP 3318
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
++R KR+ + V + + G+AVDW+ N+YWTD G + I V+ L G + +
Sbjct: 1946 ISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQG---FDVIEVARLNGSFRYVV 2002
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
++ GL++P I + P G +FWTE G PRI + +DG + LV+ +I WP GI++DY
Sbjct: 2003 ISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERVVLVNVSISWPNGISVDYQ 2062
Query: 127 SQRLYWADPKARTIESINLN-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFS--TYRTNNI 183
+LYW D + IE I+L G++R VV + N + + VFED +Y+S T+ +I
Sbjct: 2063 DGKLYWCDARTDKIERIDLETGENREVVLSS--NNMDMFSVSVFEDFIYWSDRTHANGSI 2120
Query: 184 LKINKFGNSDFNVLANNLN-RASDVLILQENKQ 215
+ +K +D L + + D+ + ++Q
Sbjct: 2121 KRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQ 2153
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 17/273 (6%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I + +RE LK +H+ GVAVDW+G NLYWTD G + + ++ + +
Sbjct: 583 IGRQKIDGTERETILK---DGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTR 639
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------RISGASIDGKNKFNLV-DNNIQ 116
+TL+ + P I ++PL+G M+WT+ P R+ A +DG ++ V +
Sbjct: 640 KTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVL 699
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
WP G+++D P+ RLYW D IE+I LNG DR +VY + + + L + L+++
Sbjct: 700 WPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHA-FGLCHHGNYLFWT 758
Query: 177 TYRTNNILKINK-FGNSDFNVLANNLNRASDVLILQENKQAHNV-TNHCDDKPCHQSALC 234
YR+ ++ ++ + G + V R I + Q V TN C S+LC
Sbjct: 759 EYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLC 818
Query: 235 INLPSSHTCLCPDHLTEELNVTSGKMSCKVAPA 267
+ P S C C E+ + + ++C P+
Sbjct: 819 LATPGSRQCAC----AEDQVLDADGVTCLANPS 847
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84
L P G+AVDW+ N+YW ++ + + I V+ L+G + TLL + P IAL+P G
Sbjct: 1343 LATPEGLAVDWIAGNIYWVES---NLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDG 1399
Query: 85 RMFWTELGIK-PRISGASIDGKNKFNLVDNNIQ--WPTGITIDYPSQRLYWADPKARTIE 141
+FWT+ PRI AS+ G + + WP G+T+DY +R+ W D ++ I
Sbjct: 1400 ILFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1459
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNL 201
S +G V + P+ + ++ +Y++ +RTN + K NK+ + V+
Sbjct: 1460 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1519
Query: 202 NRASDVLILQENKQAHNVTNHCD----DKPCHQSALC-INLPSSHTCLCPDHLTE 251
+ D+ + ++Q N C+ PC S LC IN + +C CP HL +
Sbjct: 1520 TQPFDLQVYHPSRQPM-APNPCEANGGQGPC--SHLCLINYNRTVSCACP-HLMK 1570
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 19/235 (8%)
Query: 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83
+LH +A+DW+ N Y+ D + I V G TLL+ L P IAL+P
Sbjct: 278 SLHHVEQMAIDWLTGNFYFVDD---IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAM 334
Query: 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESI 143
G++F+T+ G P++ +DG+N+ LVD+ I +P GIT+D S+ +YWAD IE +
Sbjct: 335 GKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVV 394
Query: 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS------TYRTNNILKINKFGNSDFNVL 197
+ GK R + + Y L VFE+ LY + + +++++N+F ++++ V+
Sbjct: 395 DYEGKGRQTIIQGILIEHL-YGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVV 453
Query: 198 ANNLNRASDVLILQENKQAHNVTNHCDD----KPCHQSALCINLPSSH---TCLC 245
+++ + I + +Q ++ C++ KP S +C+ L +SH TC C
Sbjct: 454 T-RVDKGGALHIYHQRRQPRVRSHACENDQYGKPGGCSDICL-LANSHKARTCRC 506
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 18 LKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
++TV+S +L + G+AVDWV +NL+WT + + I V+ L+G K ++ GL +P+
Sbjct: 1649 VETVVSADLPNAHGLAVDWVSRNLFWT-SYDTNKKQINVARLDGSFKNAVVQ-GLEQPHG 1706
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ + PL G+++WT+ IS A++DG N+ L+ + + P G+ ID+P +LYW
Sbjct: 1707 LVVHPLRGKLYWTD---GDNISMANMDGSNR-TLLFSGQKGPVGLAIDFPESKLYWISSG 1762
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
TI NL+G V+ K L + D L+++ + + +K S V
Sbjct: 1763 NHTINRCNLDGSGLEVIDAMRSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVV 1822
Query: 197 LANNLNRASDVLILQENKQA-HNVTNHCDDKPCHQSALCINLPSSHT---CLCPDHLTEE 252
L N+ + + E+ Q H TN C S LC LP+S T C+C T
Sbjct: 1823 LRNSTTLVMHMKVYDESIQLDHKGTNPCSVNNGDCSQLC--LPTSETTRSCMC----TAG 1876
Query: 253 LNVTSGKMSCK 263
++ SG+ +C+
Sbjct: 1877 YSLRSGQQACE 1887
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 126/296 (42%), Gaps = 96/296 (32%)
Query: 463 CSITDSGPKCMCSPGYSGKKCDTCTC-----------------------------LNGDS 493
C ++ SGP C C +GK+ D TC LN
Sbjct: 4160 CLLSPSGPVCTCP---NGKRLDNGTCVPVPSPTPPPDAPRPGTCNLQCFNGGSCFLNARR 4216
Query: 494 GPKCMCSPGYSGKKC--DTCT--CLNGGTCIPN-SKNNVCKCPSQYTGRRCECAVGDTSC 548
PKC C P Y+G KC D C C NGGTC + S C+CP+ +TG +C V C
Sbjct: 4217 QPKCRCQPRYTGDKCELDQCWEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQV----C 4272
Query: 549 ASLANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSY 607
A YC+NN TC + +G +P C+CLP + G +C R+ C YC+N G C
Sbjct: 4273 AG--------YCANNSTCTVNQGNQPQCRCLPGFLGDRCQYRQ----CSGYCENFGTCQM 4320
Query: 608 SKQGKPVCTC-----------------------VNGWSG-ITCS---ERVS-----CAHF 635
+ G C C VN SG +TC+ RV+ C
Sbjct: 4321 AADGSRQCRCTAYFEGSRCEVNKCSRCLEGACVVNKQSGDVTCNCTDGRVAPSCLTCVGH 4380
Query: 636 CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKKQSYVNSHISSILI 691
C NGG+C +++ + P C CP G RC+ H S++Q HI+SILI
Sbjct: 4381 CSNGGSC-----TMNSKMMPECQCPPHMTGPRCEE--HVFSQQQP---GHIASILI 4426
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 12/234 (5%)
Query: 1 MASISSGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRS-SNNIMVSTL 58
+ I GN+ ++ + + + T++ N+ G+A LYWT + + + + T
Sbjct: 2257 FSDIHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTR 2316
Query: 59 EGRKKRTLLNT--GLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNI 115
G +R + T G + P L+ MFWT + P I A++ G N L++ +I
Sbjct: 2317 PGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDI 2376
Query: 116 QWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYF 175
+ P G+ ID+ +++LY++D IE +G R+V+ +E P+ L V+ +++++
Sbjct: 2377 RTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEP--VHPFGLAVYGEHIFW 2434
Query: 176 STYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCH 229
+ + + + NK S+ +L ++ + +I N TN C+ PC
Sbjct: 2435 TDWVRRAVQRANKHVGSNMKLLRVDIPQQPMGIIAVAND-----TNSCELSPCR 2483
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 9 VTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN 68
V+++ V S L +PR + VD LYWTD G S I ++G + +++
Sbjct: 3128 VSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSL--IGRIGMDGSSRSVIVD 3185
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
T + P + L+ ++ R++W + + I AS+DG N+ ++ +I P +
Sbjct: 3186 TKITWPNGLTLDYVTERIYWAD-AREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFED 3242
Query: 129 RLYWADPKARTIESIN-LNGKDRFVVYHTEDNGYKPYKLEVF 169
+YW D + ++I + G ++ ++ T ++P L VF
Sbjct: 3243 YVYWTDWETKSINRAHKTTGTNKTLLISTL---HRPMDLHVF 3281
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGITI 123
TLL GLN + + ++WT++ + I ++G N L + P G+ +
Sbjct: 3050 TLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAV 3109
Query: 124 DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
D+ LYW D TIE LNG R V+ + + ++V LY++ + +++
Sbjct: 3110 DWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSL 3169
Query: 184 LKINKFGNSDFNVLAN 199
+ S +V+ +
Sbjct: 3170 IGRIGMDGSSRSVIVD 3185
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPS 376
N GTC+ D C C F G+ CE S C +G C + + T C+C
Sbjct: 4314 NFGTCQMAADGSRQCRCTAYFEGSRCEVNKCSRCL---EGACVVNKQSGDVT--CNCTDG 4368
Query: 377 YTGARCESRICENKCHNGGTCIATTQT---CVCPPGFTGDTCQQCLNLKCQNGGV 428
C + C C NGG+C ++ C CPP TG C++ + + Q G +
Sbjct: 4369 RVAPSCLT--CVGHCSNGGSCTMNSKMMPECQCPPHMTGPRCEEHVFSQQQPGHI 4421
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 257/546 (47%), Gaps = 86/546 (15%)
Query: 11 RVKREMNLKTV---LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
R +R+++ +S L PRG+A+DWV N+YWTD+G + I V+ ++G ++TL+
Sbjct: 3941 RHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSG---RDVIEVAQMKGENRKTLI 3997
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ ++EP+ I ++PL G M+W++ G P+I A++DG + LV +NIQWPTG+ +DY +
Sbjct: 3998 SGMIDEPHAIVVDPLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHN 4057
Query: 128 QRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKIN 187
+RLYWAD K I SI LNG D V ++ P+ ++VFED +Y TY N + KI+
Sbjct: 4058 ERLYWADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIH 4117
Query: 188 KFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPD 247
KFG+S L L+ ASDV++ ++KQ VTN CD K C LC+ PS C CP+
Sbjct: 4118 KFGHSPLINLTGGLSHASDVVLYHQHKQPE-VTNPCDRKKCEW--LCLLSPSGPVCTCPN 4174
Query: 248 HLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVA 307
G + TC + V S
Sbjct: 4175 -----------------------------GKRLDNGTC---------VPVPSPTPPPDAP 4196
Query: 308 PARTCYLDC-NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPE 366
TC L C N G+C + P C CQ + G CE ++ C N G C P
Sbjct: 4197 RPGTCTLQCFNGGSCFLNARRQPKCRCQPRYTGDKCE-LDQCWEYCHNGGTC---AASPS 4252
Query: 367 PTYKCHCAPSYTGARCESRICENKCHNGGTCI---ATTQTCVCPPGFTGDTCQ--QCLNL 421
C C +TG +C +++C C N TC C C PGF GD CQ QC
Sbjct: 4253 GMPTCRCPTGFTGPKCTAQVCAGYCSNNSTCTVNQGNQPQCRCLPGFLGDRCQYRQCSGF 4312
Query: 422 KCQNGGVCVNKTTG-LECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSG 480
C+N G C G +C C ++ G C+ ++C C+ G C +
Sbjct: 4313 -CENFGTCQMAADGSRQCRCTVYFEGPRCEVNKCSR-CLQGACVVNKQTGDV-------- 4362
Query: 481 KKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCT--CLNGGTCIPNSKNN-VCKCPSQYTGR 537
TC C +G P C+ TC C NGG+C NSK C+CP TG
Sbjct: 4363 ----TCNCTDGRVAPSCL-----------TCIDHCSNGGSCTMNSKMMPECQCPPHMTGP 4407
Query: 538 RCECAV 543
RCE V
Sbjct: 4408 RCEEQV 4413
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 16/230 (6%)
Query: 23 SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82
+ L +P G+AVDWVG NLYW D G + I VS L G + L+++GL EP + ++
Sbjct: 3100 TGLSNPDGLAVDWVGGNLYWCDKG---RDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQ 3156
Query: 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIES 142
+G ++WT+ G I +DG + +VD I WP G+T+DY ++R+YWAD + IE
Sbjct: 3157 NGYLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEF 3216
Query: 143 INLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLN 202
+L+G +R VV ++D + + L +FED +Y++ + T +I + +K ++ +L + L+
Sbjct: 3217 ASLDGSNRHVVL-SQDIPHI-FALTLFEDYVYWTDWETKSINRAHKTTGANKTLLISTLH 3274
Query: 203 RASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCINLP-SSHTCLCP 246
R D+ + +Q +V NH PC S LC+ P H C CP
Sbjct: 3275 RPMDLHVFHALRQP-DVPNH----PCKVNNGGCSNLCLLSPGGGHKCACP 3319
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
++R KR+ + V + + G+AVDW+ N+YWTD G + I V+ L G + +
Sbjct: 1947 ISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQG---FDVIEVARLNGSFRYVV 2003
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
++ GL++P I + P G +FWTE G PRI + +DG + LV+ +I WP GI++DY
Sbjct: 2004 ISQGLDKPRAITVHPEKGYLFWTEWGHYPRIERSRLDGTERVVLVNVSISWPNGISVDYQ 2063
Query: 127 SQRLYWADPKARTIESINLN-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFS--TYRTNNI 183
+LYW D + IE I+L G++R VV + N + + VFED +Y+S T+ +I
Sbjct: 2064 GGKLYWCDARMDKIERIDLETGENREVVLSS--NNMDMFSVSVFEDFIYWSDRTHANGSI 2121
Query: 184 LKINKFGNSDFNVLANNLN-RASDVLILQENKQ 215
+ K +D L + + D+ + ++Q
Sbjct: 2122 KRGCKDNATDSVPLRTGIGVQLKDIKVFNRDRQ 2154
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 17/273 (6%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I + +RE LK +H+ GVAVDW+G NLYWTD G + + ++ + +
Sbjct: 584 IGRQKIDGTERETILK---DGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTR 640
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------RISGASIDGKNKFNLV-DNNIQ 116
+TL+ + P I ++PL+G M+WT+ P R+ A +DG ++ V +
Sbjct: 641 KTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVL 700
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
WP G+++D P+ RLYW D IE+I LNG DR +VY + + + L + L+++
Sbjct: 701 WPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHA-FGLCHHGNYLFWT 759
Query: 177 TYRTNNILKINK-FGNSDFNVLANNLNRASDVLILQENKQAHNV-TNHCDDKPCHQSALC 234
YR+ ++ ++ + + V R I + Q V TN C S+LC
Sbjct: 760 EYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLC 819
Query: 235 INLPSSHTCLCPDHLTEELNVTSGKMSCKVAPA 267
+ P S C C E+ + + ++C P+
Sbjct: 820 LATPGSRQCAC----AEDQVLDTDGVTCLANPS 848
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84
L P G+AVDW+ N+YW ++ + + I V+ L+G + TLL + P IAL+P G
Sbjct: 1344 LATPEGLAVDWIAGNIYWVES---NLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDG 1400
Query: 85 RMFWTELGIK-PRISGASIDGKNKFNLVDNNIQ--WPTGITIDYPSQRLYWADPKARTIE 141
+FWT+ PRI AS+ G + + WP G+T+DY +R+ W D ++ I
Sbjct: 1401 ILFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1460
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNL 201
S +G V + P+ + ++ +Y++ +RTN + K NK+ + V+
Sbjct: 1461 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1520
Query: 202 NRASDVLILQENKQAHNVTNHCDDK----PCHQSALC-INLPSSHTCLCPDHLTE 251
+ D+ + ++Q N C+ PC S LC IN + +C CP HL +
Sbjct: 1521 TQPFDLQVYHPSRQPM-APNPCEANGGRGPC--SHLCLINYNRTVSCACP-HLMK 1571
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 124/235 (52%), Gaps = 19/235 (8%)
Query: 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83
+LH +A+DW+ N Y+ D + I V G TLL+ L P IAL+P
Sbjct: 279 SLHHVEQMAIDWLTGNFYFVDD---IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAM 335
Query: 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESI 143
G++F+T+ G P++ +DG+N+ LVD+ I +P GIT+D S+ +YWAD IE +
Sbjct: 336 GKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVV 395
Query: 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS------TYRTNNILKINKFGNSDFNVL 197
+ GK R + + Y L VFE+ LY + T + +++++N+F ++++ V+
Sbjct: 396 DYEGKGRQTIIQGILIEHL-YGLTVFENYLYATNSDNANTQQKTSVIRVNRFNSTEYQVV 454
Query: 198 ANNLNRASDVLILQENKQAHNVTNHCDD----KPCHQSALCINLPSSH---TCLC 245
+++ + I + +Q ++ C++ KP S +C+ L +SH TC C
Sbjct: 455 T-RVDKGGALHIYHQRRQPRVRSHACENDQYGKPGGCSDICL-LANSHKARTCRC 507
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 18 LKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
++TV+S +L + G+AVDWV +NL+WT + + I V+ L+G K ++ GL +P+
Sbjct: 1650 VETVVSADLPNAHGLAVDWVSRNLFWT-SYDTNKKQINVARLDGSFKNAVVQ-GLEQPHG 1707
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ + PL G+++WT+ IS A++DG N L+ + + P G+ ID+P +LYW
Sbjct: 1708 LVVHPLRGKLYWTD---GDNISMANMDGSNH-TLLFSGQKGPVGLAIDFPESKLYWISSG 1763
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
TI NL+G + V+ K L + D L+++ + + NK S V
Sbjct: 1764 NHTINRCNLDGSELEVIDTMRSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSGSVV 1823
Query: 197 LANNLNRASDVLILQENKQ-AHNVTNHCDDKPCHQSALCINLPSSHT---CLCPDHLTEE 252
L N+ + + E+ Q H TN C S LC LP+S T C+C T
Sbjct: 1824 LRNSTTLVMHMKVYDESIQLEHEGTNPCSVNNGDCSQLC--LPTSETTRSCMC----TAG 1877
Query: 253 LNVTSGKMSCK 263
++ SG+ +C+
Sbjct: 1878 YSLRSGQQACE 1888
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 131/315 (41%), Gaps = 96/315 (30%)
Query: 463 CSITDSGPKCMCSPGYSGKKCDTCTC-----------------------------LNGDS 493
C ++ SGP C C +GK+ D TC LN
Sbjct: 4161 CLLSPSGPVCTCP---NGKRLDNGTCVPVPSPTPPPDAPRPGTCTLQCFNGGSCFLNARR 4217
Query: 494 GPKCMCSPGYSGKKC--DTCT--CLNGGTCIPN-SKNNVCKCPSQYTGRRCECAVGDTSC 548
PKC C P Y+G KC D C C NGGTC + S C+CP+ +TG +C V C
Sbjct: 4218 QPKCRCQPRYTGDKCELDQCWEYCHNGGTCAASPSGMPTCRCPTGFTGPKCTAQV----C 4273
Query: 549 ASLANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSY 607
A YCSNN TC + +G +P C+CLP + G +C R+ C +C+N G C
Sbjct: 4274 AG--------YCSNNSTCTVNQGNQPQCRCLPGFLGDRCQYRQ----CSGFCENFGTCQM 4321
Query: 608 SKQGKPVCTCVNGWSGITCSER--------------------------------VSCAHF 635
+ G C C + G C ++C
Sbjct: 4322 AADGSRQCRCTVYFEGPRCEVNKCSRCLQGACVVNKQTGDVTCNCTDGRVAPSCLTCIDH 4381
Query: 636 CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKKQSYVNSHISSILILILL 695
C NGG+C +++ + P C CP G RC+ V +S++Q H++SILI +LL
Sbjct: 4382 CSNGGSC-----TMNSKMMPECQCPPHMTGPRCEEQV--VSQQQP---GHMASILIPLLL 4431
Query: 696 LITVGGIGYYIFRIK 710
L+ + + +F K
Sbjct: 4432 LLLLLLVAGVVFWYK 4446
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 12/234 (5%)
Query: 1 MASISSGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRS-SNNIMVSTL 58
+ I GN+ ++ + + +T ++ N+ G+A LYWT + + + + T
Sbjct: 2258 FSDIHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTR 2317
Query: 59 EGRKKRTLLNT--GLNEPYDIALEPLSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNI 115
G +R + T G + P L+ MFWT + P I A++ G N L++ +I
Sbjct: 2318 PGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDI 2377
Query: 116 QWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYF 175
+ P G+ ID+ +++LY++D IE +G R+V+ +E P+ L V+ +++++
Sbjct: 2378 RTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEP--VHPFGLAVYGEHIFW 2435
Query: 176 STYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCH 229
+ + + + NK+ SD +L ++ + +I N TN C+ PC
Sbjct: 2436 TDWVRRAVQRANKYVGSDMKLLRVDIPQQPMGIIAVAND-----TNSCELSPCR 2484
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 9 VTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN 68
V+++ V S L +PR + VD LYWTD G S I ++G + +++
Sbjct: 3129 VSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSL--IGRIGMDGSGRSIIVD 3186
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
T + P + ++ ++ R++W + + I AS+DG N+ ++ +I P +
Sbjct: 3187 TKITWPNGLTVDYVTERIYWAD-AREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFED 3243
Query: 129 RLYWADPKARTIESIN-LNGKDRFVVYHTEDNGYKPYKLEVF 169
+YW D + ++I + G ++ ++ T ++P L VF
Sbjct: 3244 YVYWTDWETKSINRAHKTTGANKTLLISTL---HRPMDLHVF 3282
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGITI 123
TLL GLN + + ++WT++ + I ++G N L + P G+ +
Sbjct: 3051 TLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAV 3110
Query: 124 DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
D+ LYW D TIE LNG R V+ + + ++V LY++ + +++
Sbjct: 3111 DWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSL 3170
Query: 184 L 184
+
Sbjct: 3171 I 3171
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 241/549 (43%), Gaps = 94/549 (17%)
Query: 11 RVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRS------------SNNIMVSTL 58
R KR+ N + PR +AVDWV N+YWTD +I V L
Sbjct: 3954 REKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQL 4013
Query: 59 EGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWP 118
G LL EPY IA+ P G M+WT +G I A++DG + LV N+Q P
Sbjct: 4014 NGPNCTRLLTNMAGEPYAIAVNPKRGMMYWTVVGDHSHIEEAAMDGTLRRILVQKNLQRP 4073
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
TG+ +DY S+R+YWAD + I S+ +G + V ++ P+++++FED +Y +
Sbjct: 4074 TGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSSKQGLLHPHRIDIFEDYIYGAGP 4133
Query: 179 RTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP 238
+ N + ++ KFG+ LA N+++ VLI KQ ++ N C D C LC+ P
Sbjct: 4134 K-NGVFRVQKFGHGSVEYLALNIDKTKGVLISHRYKQL-DLPNPCLDLACE--FLCLLNP 4189
Query: 239 SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVT 298
S TC+CP+ G + TC D L ++
Sbjct: 4190 SGATCVCPE-----------------------------GKYLINGTCN-DDSLLDD---- 4215
Query: 299 SGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMC 358
S K++C+ N G C ++ D C C ++ G CE VN+ C N G C
Sbjct: 4216 SCKLTCE-----------NGGRCILNEKGDLRCHCWPSYSGERCE-VNHCSNYCQNGGTC 4263
Query: 359 YPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQT---CVCPPGFTGDTC 415
P + PT C CA +TG C +CE+ C NGGTCI T C C P +TGD C
Sbjct: 4264 VPSVL-GRPT--CSCALGFTGPNCGKTVCEDFCQNGGTCIVTAGNQPYCHCQPEYTGDRC 4320
Query: 416 QQCL-NLKCQNGGVCVNKTTG-LECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCM 473
Q + + C N C G +EC CP Y G C+ +C C G C I
Sbjct: 4321 QYYVCHHYCVNSESCTIGDDGSVECVCPTRYEGPKCEVDKCVR-CHGGHCIINKDSEDIF 4379
Query: 474 CSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNN--VCKCP 531
C+ C NG C GY C NGGTC + + N VC C
Sbjct: 4380 CN------------CTNGKIASSCQLCDGY---------CYNGGTCQLDPETNVPVCLCS 4418
Query: 532 SQYTGRRCE 540
+ ++G +CE
Sbjct: 4419 TNWSGTQCE 4427
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 13/260 (5%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I + +RE LK L N+ G+AVDW+G NLYWT+ G R + N+ + +
Sbjct: 580 IGRQKIDGTERETILKDDLDNV---EGIAVDWIGNNLYWTNDGHRKTINVARLEKASQSR 636
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------RISGASIDGKNKFNLVDNNIQW 117
+TLL ++ P I ++P++G M+WT+ RI A +DG N+ V + + W
Sbjct: 637 KTLLEGEMSHPRGIVVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLW 696
Query: 118 PTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177
P G+T+D+ + LYW D IE + LNG R +VY + + P+ L + ++++
Sbjct: 697 PNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIVYSGRELNH-PFGLSHHGNYVFWTD 755
Query: 178 YRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINL 237
Y +I +++ S+ +L + + I KQ + ++ C S LC+ +
Sbjct: 756 YMNGSIFQLDLI-TSEVTLLRHERPPLFGLQIYDPRKQQGDNMCRVNNGGC--STLCLAI 812
Query: 238 PSSHTCLCPDHLTEELNVTS 257
P C C D+ + N T+
Sbjct: 813 PGGRVCACADNQLLDENGTT 832
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
++R KR+ K + + L G+AVDW+ N+YWTD G N I V+ L G + +
Sbjct: 1934 ISRAKRDQTWKEDIITNGLGRVEGIAVDWIAGNIYWTDHG---FNLIEVARLNGSFRYVI 1990
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
++ GL++P IA+ P G +FWTE G P I A +DG K LV I WP GI+IDY
Sbjct: 1991 ISQGLDQPRSIAVHPEKGLLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYE 2050
Query: 127 SQRLYWADPKARTIESINLN-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
+LYW D + IE I+L G +R +V + + + VF +Y+S
Sbjct: 2051 ENKLYWCDARTDKIERIDLETGGNREMVLSGSN--VDMFSVAVFGAYIYWS 2099
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 15/252 (5%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
V+ N P +AVDW+GKNLYW+D R I VS L G L++ L P D++L+
Sbjct: 3082 VVHNTAVPNALAVDWIGKNLYWSDTEKRI---IEVSKLNGLYPTILVSKRLKFPRDLSLD 3138
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P +G ++W + P I +DG N+ +++ I P +TIDY ++RLYWAD I
Sbjct: 3139 PQAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADENH--I 3196
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E N++G R V + + G L +FED +Y++ +T ++ + +K +D L +
Sbjct: 3197 EFSNMDGSHRHKVPNQDIPGV--IALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLIYS 3254
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP-SSHTCLCP-------DHLTEE 252
+ +D+ + +Q + C S LC+ P +HTC CP D+ T
Sbjct: 3255 WHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCL 3314
Query: 253 LNVTSGKMSCKV 264
N T+ + CK
Sbjct: 3315 SNCTASQFRCKT 3326
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 19/264 (7%)
Query: 5 SSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR 64
SG V+ ++ V L P G+ VDW+ N+YW D+ + + I V+ L+G +
Sbjct: 1319 ESGGVSAIE-----VVVEHGLATPEGLTVDWIAGNIYWIDS---NLDQIEVAKLDGSLRT 1370
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDN--NIQWPTGI 121
TL+ + P IAL+P G +FWT+ PRI AS+ G + + + WP G+
Sbjct: 1371 TLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGL 1430
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
T+D+ +R+ W D ++ I S +G + + + P+ + ++ +Y++ +RTN
Sbjct: 1431 TVDHFEKRIVWTDARSDAIYSALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTN 1490
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENK--QAHNVTNHCDDK-PCHQSALCINLP 238
+ K NK+ + +V+ + D+ I ++ QA N D K PC L IN
Sbjct: 1491 TLSKANKWTGQNVSVIQKTSAQPFDLQIYHPSRQPQAPNPCAANDGKGPCSHMCL-INHN 1549
Query: 239 SSHTCLCPDHLTEELNVTSGKMSC 262
S C CP HL + ++S K +C
Sbjct: 1550 RSAACACP-HL---MKLSSDKKTC 1569
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 10/224 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+L + H+ + +A+DW+ +NLY+ D G + I V G TL++ L+ P IA++
Sbjct: 278 ILQSFHNVQQMAIDWLTRNLYFVDHVG---DRIFVCNSNGSVCVTLIDLELHNPKAIAVD 334
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P++G++F+T+ G ++ +DG N+ ++D+ + P + +D ++ +YW D +
Sbjct: 335 PIAGKLFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYV 394
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
++ GK+R V + Y + VFED LY + NI++IN+F +D + L
Sbjct: 395 GVVDYQGKNRHTVIQGRQVRHL-YGITVFEDYLYATNSDNYNIVRINRFNGTDIHSLI-K 452
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCL 244
+ A + I Q+ Q ++ C+ P C SH CL
Sbjct: 453 IENAWGIRIYQKRTQPTVRSHACEVDPYGMPGGC-----SHICL 491
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 143/333 (42%), Gaps = 86/333 (25%)
Query: 418 CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGEC---SITDSGPKCMC 474
CL+L C+ +C+ +G C CP+ GK Y +NG C S+ D K C
Sbjct: 4176 CLDLACE--FLCLLNPSGATCVCPE---GK---------YLINGTCNDDSLLDDSCKLTC 4221
Query: 475 SPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDT--CT--CLNGGTCIPNSKNN-VCK 529
+G +C LN +C C P YSG++C+ C+ C NGGTC+P+ C
Sbjct: 4222 E---NGGRC----ILNEKGDLRCHCWPSYSGERCEVNHCSNYCQNGGTCVPSVLGRPTCS 4274
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQCTE 588
C +TG C G T C ++C N GTC++ G +P C C P Y+G +C
Sbjct: 4275 CALGFTGPNC----GKTVCE--------DFCQNGGTCIVTAGNQPYCHCQPEYTGDRCQY 4322
Query: 589 REDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITC------------------SERV 630
CH+YC N+ C+ G C C + G C SE +
Sbjct: 4323 Y----VCHHYCVNSESCTIGDDGSVECVCPTRYEGPKCEVDKCVRCHGGHCIINKDSEDI 4378
Query: 631 S--------------CAHFCFNGGTCREQNYSLDPDLK-PICICPRGYAGVRCQTLVHYI 675
C +C+NGGTC+ LDP+ P+C+C ++G +C+
Sbjct: 4379 FCNCTNGKIASSCQLCDGYCYNGGTCQ-----LDPETNVPVCLCSTNWSGTQCERPAPKS 4433
Query: 676 SKKQSYVNSHISSILILILL--LITVGGIGYYI 706
SK I+ I+ L+LL LIT IG +
Sbjct: 4434 SKSDHISTRSIAIIVPLVLLVTLITTLVIGLVL 4466
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 18 LKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
L+TV+S ++ RG+AVDWV +NLYW + I V+ L+G K ++++ G+++P
Sbjct: 1640 LETVISRDIQSIRGLAVDWVSRNLYWI-SSEFDETQINVARLDGSLKTSIIH-GIDKPQC 1697
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+A P+ G+++WT+ I+ A++DG N L N + P G++IDY +LYW
Sbjct: 1698 LAAHPVRGKLYWTDGNT---INMANMDGSNSKILFQNQKE-PVGLSIDYVENKLYWISSG 1753
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
TI NL+G + V+ ++ K L + + L+++ + +K + +
Sbjct: 1754 NGTINRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTI 1813
Query: 197 LANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSH---TCLCPDHLTEEL 253
L N + + + +K+A +N C S LC LP+S TC+C T
Sbjct: 1814 LRNKTSGVVHMKVY--DKEAQQGSNSCQLNNGGCSQLC--LPTSETTRTCMC----TVGY 1865
Query: 254 NVTSGKMSCK 263
+ +MSC+
Sbjct: 1866 YLQKNRMSCQ 1875
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 7 GNVTRVKREM-NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMV-STLEGRKKR 64
GN+ +K + + ++ N+ G+A LYWT + S V T G R
Sbjct: 2249 GNIQLIKDNWEDRQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDR 2308
Query: 65 TLLNTGLNE--PYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGI 121
+ T + P+ +AL+ MFWT + P I +++ GKN +V +I P G+
Sbjct: 2309 EAVITMSEDDHPHVLALDECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGL 2368
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
TIDY +++LY++D IE +G R V+ + + L V+++ +++S +
Sbjct: 2369 TIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSGPGTF--LSLAVYDNYIFWSDWGRR 2426
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPC 228
IL+ NK+ D +L +++ +I N TN C+ PC
Sbjct: 2427 AILRSNKYTGGDTKILRSDIPHQPMGIIAVAND-----TNSCELSPC 2468
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 53 IMVSTLEGRKKRTLLNTGLNEPYDI--ALEPLSGRMF--------------WTELGIKPR 96
+M S EG + L EP D AL P+SG F WT++G +
Sbjct: 1881 LMYSVHEGIRGIPL------EPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFN-K 1933
Query: 97 ISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVV 153
IS A D K +++ N + GI +D+ + +YW D IE LNG R+V+
Sbjct: 1934 ISRAKRDQTWKEDIITNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVI 1990
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN----LVDNNIQ 116
++ +LL GL + ++WT++ ++ RI + + +V++ +
Sbjct: 1277 KRDYSLLVPGLRNTIALDFHFNQSLLYWTDV-VEDRIYRGKLSESGGVSAIEVVVEHGLA 1335
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+T+D+ + +YW D IE L+G R + + L+ L+++
Sbjct: 1336 TPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWT 1395
Query: 177 TYRTN 181
+ N
Sbjct: 1396 DWDAN 1400
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW--AD 134
I + R++WT++ + I A I+G ++ +IQ G+ +D+ S+ LYW ++
Sbjct: 1611 IDFDASEERLYWTDIKTQT-IKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSE 1669
Query: 135 PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEV--FEDNLYFSTYRTNNILKIN 187
I L+G + + H D KP L LY++ T N+ ++
Sbjct: 1670 FDETQINVARLDGSLKTSIIHGID---KPQCLAAHPVRGKLYWTDGNTINMANMD 1721
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
N K + N +P G+++D+V LYW +G + N L+G + +
Sbjct: 1724 NSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINR---CNLDGGNLEVIESMKEELTKA 1780
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKN 106
AL + +++W + + + + DG+N
Sbjct: 1781 TALTIMDKKLWWADQNLAQLGTCSKRDGRN 1810
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 237/550 (43%), Gaps = 94/550 (17%)
Query: 10 TRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRS------------SNNIMVST 57
R KR+ N + PR +AVDWV N+YWTD +I V
Sbjct: 3953 AREKRQANSGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYSINVGQ 4012
Query: 58 LEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQW 117
L G LL EPY IA+ P G M+WT +G I A++DG + LV N+Q
Sbjct: 4013 LNGPNCTRLLTNMAGEPYAIAVNPKRGMMYWTVIGDHSHIEEAAMDGTLRRVLVQKNLQR 4072
Query: 118 PTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177
PTG+T+D+ +R+YWAD + I S+ +G V ++ P++++VFED +Y +
Sbjct: 4073 PTGLTVDHFGERIYWADFELSIIGSVLYDGSSPVVSVSSKQGLLHPHRIDVFEDYIYGAG 4132
Query: 178 YRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINL 237
+ N I ++ KFG+ VLA +++ +L+ KQ N+ N C D C LC+
Sbjct: 4133 PK-NGIFRVQKFGHGSVEVLALGVDKTKSILVSHRYKQL-NLPNPCLDLSC--DFLCLLN 4188
Query: 238 PSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNV 297
PS TC+CP+ K TC+ D L
Sbjct: 4189 PSGATCICPEG--------------KYMMNGTCHDD--------------------SLLD 4214
Query: 298 TSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGM 357
S K++C+ N G C ++ D C C ++ G CE VN+ C N G
Sbjct: 4215 DSCKLTCE-----------NGGRCILNEKGDLRCHCWPSYSGGRCE-VNHCSNYCQNGGT 4262
Query: 358 CYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQT---CVCPPGFTGDT 414
C P T PT C CA +TG C +CE+ CHNGG+C+ T C C +TGD
Sbjct: 4263 CIPS-TLGRPT--CICALGFTGPNCGKAVCEDSCHNGGSCVVTAGNQPYCHCQADYTGDR 4319
Query: 415 CQQCL-NLKCQNGGVCVNKTTG-LECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKC 472
CQ + + C N C G +EC CP Y G C+ +C C G C I
Sbjct: 4320 CQYYVCHHYCVNSESCTIGNDGSVECVCPTRYEGPKCEIDKCVR-CHGGHCIINKDNEDI 4378
Query: 473 MCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCI--PNSKNNVCKC 530
C+ C NG C GY C NGGTC P + VC C
Sbjct: 4379 FCN------------CTNGKIASSCQLCDGY---------CYNGGTCQLDPETSIPVCVC 4417
Query: 531 PSQYTGRRCE 540
+ ++G +CE
Sbjct: 4418 STNWSGTQCE 4427
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I + +RE LK L N+ G+AVDW+G NLYWT+ G R + N+ + +
Sbjct: 580 IGRQKIDGTERETILKDDLDNV---EGIAVDWIGNNLYWTNDGHRKTINVARLEKASQSR 636
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------RISGASIDGKNKFNLVDNNIQW 117
+TLL G++ P I ++P++G M+WT+ RI A +DG N+ V + + W
Sbjct: 637 KTLLEGGMSHPRAIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLW 696
Query: 118 PTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177
P G+T+D+ + LYW D IE + LNG R VVY ++ + P+ L + ++++
Sbjct: 697 PNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVVYSGKELNH-PFGLSHHGNYVFWTD 755
Query: 178 YRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINL 237
Y +I +++ N + +L + + I KQ + ++ C LC+ +
Sbjct: 756 YMNGSIFQLDLMTN-EVTLLRHERAPLFGLQIYDPRKQQGDNMCRINNGGC--GTLCLAI 812
Query: 238 PSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNL 279
P+ C C D+ + N T +C P + C G
Sbjct: 813 PAGRVCACADNQLLDENGT----TCTFNPEEIRFHICKPGEF 850
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 127/252 (50%), Gaps = 15/252 (5%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
V+ N P +AVDW+GKNLYW+D R I VS L G L++ L P D++L+
Sbjct: 3082 VVHNTAVPNALAVDWIGKNLYWSDTEKRI---IEVSKLNGLYPTVLVSKRLKFPRDLSLD 3138
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P +G ++W + P I +DG N+ +++ I P +TIDY + RLYWAD I
Sbjct: 3139 PRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADENH--I 3196
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E N++G R V + + G L +FED +Y++ +T ++ +++K +D L N+
Sbjct: 3197 EFSNMDGSHRHKVPNQDIPGV--IALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINS 3254
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP-SSHTCLCP-------DHLTEE 252
+ +D+ + +Q + C S LC+ P +HTC CP D+ T
Sbjct: 3255 WHAITDIQVYHSYRQPDVSKHLCTVNNGGCSHLCLLGPGKTHTCACPTNFYLAADNRTCL 3314
Query: 253 LNVTSGKMSCKV 264
N T+ + CK
Sbjct: 3315 SNCTASQFRCKT 3326
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
++R KR+ K V + L G+AVDW+ N+YWTD G N I V+ L G + +
Sbjct: 1934 ISRAKRDQTWKEDVVTNGLGRVEGIAVDWIAGNIYWTDHG---FNLIEVARLNGSFRYVI 1990
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
++ GL++P IA+ P G +FWTE G P I A +DG K +V I WP GI+IDY
Sbjct: 1991 ISQGLDQPRSIAVHPEKGFLFWTEWGQVPCIGKARLDGSEKVMIVSVGITWPNGISIDYE 2050
Query: 127 SQRLYWADPKARTIESINLN-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
+LYW D ++ IE I+L+ G +R V+ + + + VF +Y+S
Sbjct: 2051 ENKLYWCDARSDKIERIDLDTGANREVLLSGSN--VDLFSVAVFGAYIYWS 2099
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 5 SSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR 64
SG V+ ++ V L P G+ VDW+ N+YW D+ + + I VS L+G +
Sbjct: 1319 ESGGVSAIE-----VVVEHGLATPEGLTVDWIAGNIYWIDS---NLDQIEVSKLDGSLRA 1370
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDN--NIQWPTGI 121
TL+ + P IAL+P G +FWT+ PRI AS+ G + + + WP G+
Sbjct: 1371 TLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGL 1430
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
T+D+ +R+ W D ++ I S +G + + + P+ + ++ +Y++ +RTN
Sbjct: 1431 TVDHFERRIVWTDARSDAIYSAFYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTN 1490
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK----PCHQSALC-IN 236
+ K NK+ + +V+ + D+ I ++Q N C PC S LC IN
Sbjct: 1491 TLAKANKWTGQNVSVIQKTSAQPFDLQIYHPSRQPQ-APNPCAANEGRGPC--SHLCLIN 1547
Query: 237 LPSSHTCLCPDHLTEELNVTSGKMSC 262
S C CP HL + ++S K +C
Sbjct: 1548 HNRSAACACP-HL---MKLSSDKKTC 1569
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 12/240 (5%)
Query: 7 GNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR 64
G +T+ R + + + L + + +A DW+ +N+Y+ D S+ I V G
Sbjct: 262 GQITKAGRLTDQRIINSLQSFQNVEQMAFDWLTRNIYFVD---HVSDRIFVCNFNGSVCV 318
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITID 124
TL+ + L+ P IA +P++G++F+T+ G P+I +DG N+ +V + + P+ + +D
Sbjct: 319 TLIESELHNPKAIAADPIAGKLFFTDYGNVPKIERCDLDGMNRTRIVYSKAEQPSALALD 378
Query: 125 YPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNIL 184
++ +YW D + ++ GK+R + + Y + VFED LY ++ NI+
Sbjct: 379 LVNRLVYWVDLYLDYVGVVDYQGKNRHTIVQGRQVKHL-YGITVFEDYLYATSSDNFNII 437
Query: 185 KINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCL 244
+IN+F +D + + + A + Q+ Q V +H C A + SH CL
Sbjct: 438 RINRFNGTDIHSII-KMESARGIRTYQKRTQP-TVRSH----ACEVDAYGMPGGCSHICL 491
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 18/250 (7%)
Query: 18 LKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
L+TV+S ++ RG+AVDWV +NLYW + I V+ L+G K ++++ G+++P
Sbjct: 1640 LETVISRDIQSIRGLAVDWVSRNLYWI-SSEFDETQINVARLDGSLKTSIIH-GIDKPQC 1697
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+A P+ G+++WT+ I+ A++DG N L N + P G++IDY +LYW
Sbjct: 1698 LAAHPVRGKLYWTDGNT---INMANMDGSNSKILFQNQKE-PVGLSIDYVENKLYWISSG 1753
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
TI NL+G + V+ ++ K L + + L+++ + NK + ++
Sbjct: 1754 NGTINRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCNKRDGRNPSI 1813
Query: 197 LANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSH---TCLCPDHLTEEL 253
L N + + + +K+A +N C S LC LP+S TC+C T
Sbjct: 1814 LRNKTSGVVHMKVY--DKEAQQGSNSCQVNNGGCSQLC--LPTSETTRTCMC----TVGY 1865
Query: 254 NVTSGKMSCK 263
+ +MSC+
Sbjct: 1866 YLQKNRMSCQ 1875
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 134/319 (42%), Gaps = 89/319 (27%)
Query: 418 CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGEC---SITDSGPKCMC 474
CL+L C +C+ +G C CP+ GK Y +NG C S+ D K C
Sbjct: 4176 CLDLSCD--FLCLLNPSGATCICPE---GK---------YMMNGTCHDDSLLDDSCKLTC 4221
Query: 475 SPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDT--CT--CLNGGTCIPNSKNN-VCK 529
+G +C LN +C C P YSG +C+ C+ C NGGTCIP++ C
Sbjct: 4222 E---NGGRC----ILNEKGDLRCHCWPSYSGGRCEVNHCSNYCQNGGTCIPSTLGRPTCI 4274
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQCTE 588
C +TG C AV + SC N G+CV+ G +P C C Y+G +C
Sbjct: 4275 CALGFTGPNCGKAVCEDSC------------HNGGSCVVTAGNQPYCHCQADYTGDRCQY 4322
Query: 589 REDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITC------------------SERV 630
CH+YC N+ C+ G C C + G C +E +
Sbjct: 4323 Y----VCHHYCVNSESCTIGNDGSVECVCPTRYEGPKCEIDKCVRCHGGHCIINKDNEDI 4378
Query: 631 S--------------CAHFCFNGGTCREQNYSLDPDLK-PICICPRGYAGVRCQTLVHYI 675
C +C+NGGTC+ LDP+ P+C+C ++G +C+
Sbjct: 4379 FCNCTNGKIASSCQLCDGYCYNGGTCQ-----LDPETSIPVCVCSTNWSGTQCERPAPKS 4433
Query: 676 SKKQSYVNSHISSILILIL 694
SK + HIS+ I I+
Sbjct: 4434 SKSE-----HISTRSIAII 4447
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 7 GNVTRVKREM-NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRS-SNNIMVSTLEGRKKR 64
GN+ +K + + ++ N+ G+A LYWT + S + + + T G R
Sbjct: 2249 GNIQLIKDNWEDRQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTRPGAIDR 2308
Query: 65 TLLNTGLNE--PYDIALEPLSGRMFWTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGI 121
+ T + P+ +AL+ MFWT + P I A++ GKN +V +I P G+
Sbjct: 2309 EAVITMSEDDHPHVLALDECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGL 2368
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
TID+ +++LY++D IE +G R V+ + + L V++ +++S +
Sbjct: 2369 TIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSGPGTF--LSLAVYDSYIFWSDWGRR 2426
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPC 228
IL+ NK+ + +L +++ +I N TN C+ PC
Sbjct: 2427 AILRSNKYTGGETKILRSDIPHQPMGIIAVAND-----TNSCELSPC 2468
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 53 IMVSTLEGRKKRTLLNTGLNEPYDI--ALEPLSGRMF--------------WTELGIKPR 96
+M S EG + L EP D AL P+SG F WT++G+ +
Sbjct: 1881 LMYSVHEGIRGIPL------EPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLN-K 1933
Query: 97 ISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVV 153
IS A D K ++V N + GI +D+ + +YW D IE LNG R+V+
Sbjct: 1934 ISRAKRDQTWKEDVVTNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVI 1990
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW--AD 134
I + R++WT++ + I+ A I+G ++ +IQ G+ +D+ S+ LYW ++
Sbjct: 1611 IDFDASEERLYWTDIKTQT-ITRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSE 1669
Query: 135 PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEV--FEDNLYFSTYRTNNILKIN 187
I L+G + + H D KP L LY++ T N+ ++
Sbjct: 1670 FDETQINVARLDGSLKTSIIHGID---KPQCLAAHPVRGKLYWTDGNTINMANMD 1721
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN----LVDNNIQWPTG 120
+LL GL + ++WT++ ++ RI + + +V++ + P G
Sbjct: 1281 SLLVPGLRNTIALDFHFNQSLLYWTDV-VEDRIYRGKLSESGGVSAIEVVVEHGLATPEG 1339
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
+T+D+ + +YW D IE L+G R + + L+ L+++ +
Sbjct: 1340 LTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDPRYGILFWTDWDA 1399
Query: 181 N 181
N
Sbjct: 1400 N 1400
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
N K + N +P G+++D+V LYW +G + N L+G + +
Sbjct: 1724 NSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRC---NLDGGNLEVIESMKEELTKA 1780
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKN 106
AL + +++W + + + DG+N
Sbjct: 1781 TALTIMDKKLWWADQNLAQLGTCNKRDGRN 1810
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 137/238 (57%), Gaps = 13/238 (5%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ LH P G+AVDWV K++YWTD+G ++ I V+T +GR++ TL + L+EP IA++
Sbjct: 525 IDEQLHSPEGLAVDWVHKHIYWTDSGNKT---ISVATTDGRRRCTLFSRELSEPRAIAVD 581
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
PL G M+W++ G + +I A ++G ++ LV +NI+WP GIT+D SQRLYW D K +
Sbjct: 582 PLRGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQL 641
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
SI+ NG +R ++ + D P+ + VFED ++++ I N+ + +LA N
Sbjct: 642 SSIDFNGGNRKMLIFSTDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAEN 701
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLP--SSH----TCLCPDHL 249
LN D++I E KQ + CD LC+ P SSH TC CPD +
Sbjct: 702 LNNPHDIVIFHELKQP-KAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTM 758
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 45 AGGRSSNNIMVSTLEGRK----KR--TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRIS 98
G+S + I + E R+ KR + L L + +E + R++W +L + +I
Sbjct: 450 VAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYR-KIY 508
Query: 99 GASIDGKN----KFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154
A +D + + L+D + P G+ +D+ + +YW D +TI +G+ R ++
Sbjct: 509 SAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLF 568
Query: 155 HTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E + + ++ +Y+S + ++ +D L ++
Sbjct: 569 SRELSEPRAIAVDPLRGFMYWSDWGFQAKIEKAGLNGADRQTLVSD 614
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 139/240 (57%), Gaps = 17/240 (7%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ S L+ P GVA+DWV KN+YWTD+G ++ I V+T +G ++RT+ N+ L+EP IA++
Sbjct: 506 IDSQLNSPEGVAIDWVHKNIYWTDSGNKT---ISVATADGSRRRTVFNSDLSEPRAIAVD 562
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P M+W++ G K +I A ++G + LV +NI+WP GIT+D +QRLYW D K ++
Sbjct: 563 PTRRFMYWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSL 622
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
I+ NG +R V+ + D+ P+ L VFED ++++ I N+ D +VLA N
Sbjct: 623 SCIDFNGSNREVLISSIDDLSHPFGLAVFEDRVFWTDLENEAIFSANRLSGLDISVLAEN 682
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLPSSH--------TCLCPDHL 249
LN D+++ E KQ + C+ P LC LP+ H TC CPD++
Sbjct: 683 LNNPHDIVVFHELKQP-KAPDSCELSPQPNGGCEYLC--LPAPHISPRSPKFTCACPDNM 739
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK----KR--TLLNTGLNEPYDIALEPL 82
G +D + KN A G+S I + E RK KR + + L + +E
Sbjct: 418 EGYEMDTLSKNCK---AVGKSPYLIFTNRHEVRKIDLVKRDYSRIIPMLKNVVALDVEVA 474
Query: 83 SGRMFWTELGIKPRISGASIDGKN----KFNLVDNNIQWPTGITIDYPSQRLYWADPKAR 138
+ R++W +L + +I A ID + + L+D+ + P G+ ID+ + +YW D +
Sbjct: 475 TNRIYWCDLFYR-KIYSAYIDKASDTAEQVILIDSQLNSPEGVAIDWVHKNIYWTDSGNK 533
Query: 139 TIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFG 190
TI +G R V++++ + + ++ +Y+S + + KI K G
Sbjct: 534 TISVATADGSRRRTVFNSDLSEPRAIAVDPTRRFMYWSDW--GDKAKIEKAG 583
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
A I + V R++ V N+ P G+ +D + + LYW D+ S + I G
Sbjct: 577 AKIEKAGLNGVGRQV---LVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCI---DFNGS 630
Query: 62 KKRTLLNT--GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPT 119
+ L+++ L+ P+ +A+ R+FWT+L + S + G + +++ N+ P
Sbjct: 631 NREVLISSIDDLSHPFGLAV--FEDRVFWTDLENEAIFSANRLSGLD-ISVLAENLNNPH 687
Query: 120 GITI 123
I +
Sbjct: 688 DIVV 691
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 138/238 (57%), Gaps = 13/238 (5%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ LH P G+AVDWV K++YWTD+G ++ I V+T++G ++RTL + L+EP IA++
Sbjct: 492 IDEQLHSPEGLAVDWVHKHIYWTDSGNKT---ISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
PL G M+W++ G + +I + ++G ++ LV +NI+WP GIT+D SQRLYW D K +
Sbjct: 549 PLRGFMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQL 608
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
SI+ +G +R + + D P+ + VFED ++++ I N+ + ++LA N
Sbjct: 609 SSIDFSGGNRKTLISSTDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISILAEN 668
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLP--SSH----TCLCPDHL 249
LN D++I E KQ + C+ LC+ P SSH TC CPD +
Sbjct: 669 LNNPHDIVIFHELKQPR-APDACELSVQPNGGCEYLCLPAPQISSHSPKYTCACPDTM 725
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 30 GVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK----KR--TLLNTGLNEPYDIALEPLS 83
G +D + KN A G+S + I + E R+ KR + L L + +E +
Sbjct: 404 GYEMDLLTKNC--KAAAGKSPSLIFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVAT 461
Query: 84 GRMFWTELGIKPRISG---ASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
R++W +L + S + D K + L+D + P G+ +D+ + +YW D +TI
Sbjct: 462 NRIYWCDLSYRKIYSAYMDKASDPKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTI 521
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
++G R ++ + + ++ +Y+S + ++ + D L ++
Sbjct: 522 SVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMYWSDWGDQAKIEKSGLNGVDRQTLVSD 581
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
A I + V R+ V N+ P G+ +D + + LYW D+ ++I S G
Sbjct: 562 QAKIEKSGLNGVDRQT---LVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFS---G 615
Query: 61 RKKRTLLNTG--LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWP 118
++TL+++ L+ P+ IA+ ++FWT+L + S ++G + +++ N+ P
Sbjct: 616 GNRKTLISSTDFLSHPFGIAV--FEDKVFWTDLENEAIFSANRLNGL-EISILAENLNNP 672
Query: 119 TGITI 123
I I
Sbjct: 673 HDIVI 677
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 136/242 (56%), Gaps = 12/242 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
++ N+++P +AVDWV K +YWTDA +S I V+TL+G K++ L N+ L EP IA++
Sbjct: 508 MIDNVYNPAAIAVDWVYKTIYWTDA---ASKTISVATLDGAKRKFLFNSDLREPASIAVD 564
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
PLSG ++W++ G +I A ++G ++ LV +IQWP GIT+D RLYW D K +
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
S++LNG+DR +V + + P L +FED +Y+ + NKF S+ L NN
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNN 684
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPS------SHTCLCPDHLTEE 252
LN A D+++ E Q N C+D + LC+ P +TC CP+ E
Sbjct: 685 LNDAQDIIVYHELVQPSG-KNWCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLE 743
Query: 253 LN 254
N
Sbjct: 744 EN 745
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWP 118
RK+ L L + + + ++FW +L K I ASID K F ++DN + P
Sbjct: 458 RKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKA-IFSASIDDKVGRHFKMIDN-VYNP 515
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
I +D+ + +YW D ++TI L+G R +++++ ++ +Y+S +
Sbjct: 516 AAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDW 575
Query: 179 RTNNILKINKFGNSDFN 195
KI K G + F+
Sbjct: 576 --GEPAKIEKAGMNGFD 590
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 144/260 (55%), Gaps = 17/260 (6%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
A S+ +V R + + + N+++P +AVDWV K +YWTDA R+ I V+TL+G
Sbjct: 492 AIFSASIDDKVGRHVKM---IDNVYNPAAIAVDWVYKTIYWTDAASRT---ISVATLDGA 545
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
K++ L N+ L EP IA++PLSG ++W++ G +I A ++G ++ LV +IQWP GI
Sbjct: 546 KRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGI 605
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
T+D RLYW D K + S++LNG+DR +V + + P L +FED +Y+
Sbjct: 606 TLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENE 665
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPS 239
+ NKF S+ L NNLN A D+++ E Q N C++ + LC+ P
Sbjct: 666 AVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSG-KNWCEEDMENGGCEYLCLPAPQ 724
Query: 240 ------SHTCLCPD--HLTE 251
+TC CP+ HL E
Sbjct: 725 INEHSPKYTCSCPNGYHLEE 744
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWP 118
RK+ L L + + + ++FW ++ K I ASID K ++DN + P
Sbjct: 458 RKEYIQLVEQLRNTVALDADIAAQKLFWADVSQKA-IFSASIDDKVGRHVKMIDN-VYNP 515
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
I +D+ + +YW D +RTI L+G R +++++ ++ +Y+S +
Sbjct: 516 AAIAVDWVYKTIYWTDAASRTISVATLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDW 575
Query: 179 RTNNILKINKFGNSDFN 195
KI K G + F+
Sbjct: 576 --GEPAKIEKAGMNGFD 590
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 12/252 (4%)
Query: 3 SISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK 62
+I S ++ + +L N+H P G+AVDW+ KN+YWTD+ S+ I V++L G+K
Sbjct: 510 AIFSASIDTRDKVGTHTRILDNIHSPAGIAVDWIYKNIYWTDS---SAKTISVASLNGKK 566
Query: 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT 122
++ L + L EP IA++PLSG M+W++ G +I A ++G ++ LV IQWP GI
Sbjct: 567 RKVLFLSELREPASIAVDPLSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIA 626
Query: 123 IDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
+D RLYW D K + S++LNG+DR +V + P L +FED +++
Sbjct: 627 LDLVKSRLYWLDSKLHMLSSVDLNGQDRRLVLKSHMFLPHPLALTIFEDRVFWIDGENEA 686
Query: 183 ILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPS- 239
+ NKF ++ L NNLN A D+++ E Q N C++ + S LC+ P
Sbjct: 687 VYGANKFTGAELVTLVNNLNDAQDIIVYHELVQPSG-RNWCEENMVNGGCSYLCLPAPQI 745
Query: 240 -----SHTCLCP 246
+TC CP
Sbjct: 746 NEHSPKYTCTCP 757
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 136/242 (56%), Gaps = 12/242 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
++ N+++P +AVDWV K +YWTDA +S I V+TL+G K++ L N+ L EP IA++
Sbjct: 508 MIDNVYNPAAIAVDWVYKTIYWTDA---ASKTISVATLDGTKRKFLFNSDLREPASIAVD 564
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
PLSG ++W++ G +I A ++G ++ LV +IQWP GIT+D RLYW D K +
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
S++LNG+DR +V + + P L +FED +Y+ + NKF S+ L NN
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNN 684
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPS------SHTCLCPDHLTEE 252
LN A D++I E Q N C++ + LC+ P +TC CP+ E
Sbjct: 685 LNDAQDIIIYHELVQPSG-KNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLE 743
Query: 253 LN 254
N
Sbjct: 744 EN 745
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWP 118
RK+ L L + + + ++FW +L K I ASID K F ++DN + P
Sbjct: 458 RKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKA-IFSASIDDKVGRHFKMIDN-VYNP 515
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
I +D+ + +YW D ++TI L+G R +++++ ++ +Y+S +
Sbjct: 516 AAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDW 575
Query: 179 RTNNILKINKFGNSDFN 195
KI K G + F+
Sbjct: 576 --GEPAKIEKAGMNGFD 590
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 160/320 (50%), Gaps = 25/320 (7%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
A S+ +V R + + + N+++P +AVDWV K +YWTDA +S I V+TL+G
Sbjct: 492 AIFSASIDDKVGRHVKM---IDNVYNPAAIAVDWVYKTIYWTDA---ASKTISVATLDGT 545
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
K++ L N+ L EP IA++PLSG ++W++ G +I A ++G ++ LV +IQWP GI
Sbjct: 546 KRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGI 605
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
T+D RLYW D K + S++LNG+DR +V + + P L +FED +Y+
Sbjct: 606 TLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENE 665
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPS 239
+ NKF S+ L NNLN A D+++ E Q N C++ + LC+ P
Sbjct: 666 AVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSG-KNWCEEDMENGGCEYLCLPAPQ 724
Query: 240 ------SHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLP--SSHTCLCPDHL 291
+TC CP NV C+ Y + N S+ + L P
Sbjct: 725 INDHSPKYTCSCPSG----YNVEENGRDCQSTATTVTYSETKDTNTTEISATSGLVPGG- 779
Query: 292 TEELNVTSGKMSCKVAPART 311
+NVT+ V P T
Sbjct: 780 ---INVTTAVSEVSVPPKGT 796
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWP 118
RK+ L L + + + ++FW +L K I ASID K ++DN + P
Sbjct: 458 RKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKA-IFSASIDDKVGRHVKMIDN-VYNP 515
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
I +D+ + +YW D ++TI L+G R +++++ ++ +Y+S +
Sbjct: 516 AAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDW 575
Query: 179 RTNNILKINKFGNSDFN 195
KI K G + F+
Sbjct: 576 --GEPAKIEKAGMNGFD 590
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 166/334 (49%), Gaps = 58/334 (17%)
Query: 14 REMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNE 73
RE++L L L P G+AVDWVG+++YW+DA S I V+TL+GR ++ L+ T L++
Sbjct: 4134 REVDLG--LKYLMQPDGLAVDWVGRHIYWSDA---KSQRIEVATLDGRYRKWLITTQLDQ 4188
Query: 74 PYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS-QRLYW 132
P IA+ P G MFWT+ G +P+I A ++G+++ L N+ WP G++IDY + R+YW
Sbjct: 4189 PAAIAVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVLASANLGWPNGLSIDYLNGDRIYW 4248
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
+D K IESI +G DR ++ ++ KP+ L++FED LY+ + + NKFG
Sbjct: 4249 SDSKEDVIESIKYDGTDRRLII---NDAMKPFSLDIFEDQLYWVAKEKGEVWRQNKFGKG 4305
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPSSHTCLCPDHLT 250
+ L + V I + + +V+N PC Q S LC+ P ++C CP
Sbjct: 4306 NKEKLLVVNPWLTQVRIFHQLRYNQSVSN-----PCKQVCSHLCLLRPGGYSCACPQGSD 4360
Query: 251 EELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPAR 310
VT + C A EL +T +P R
Sbjct: 4361 ---FVTGSTVECDAA---------------------------SELPIT------MPSPCR 4384
Query: 311 TCYLDCNH-GTCEFDDDFDPHCICQENFYGTYCE 343
C H G+C FD++ P C C + G YCE
Sbjct: 4385 -----CMHGGSCYFDENDLPKCKCSSGYSGEYCE 4413
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 124/219 (56%), Gaps = 7/219 (3%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR--MFW 88
+AVDW+G+N+YWTD + I VS ++G + L++ + +P +AL+P G MFW
Sbjct: 1515 IAVDWIGRNIYWTDY---TLETIEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVMFW 1571
Query: 89 TELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148
++ G PRI AS+DG + +V I WP G++IDYP++ +Y+ D IE + +G+
Sbjct: 1572 SDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQ 1631
Query: 149 DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVL 208
+R V ++ + P+ L +FED+++++ T+ +++ NK+ + +V+ ++ + ++
Sbjct: 1632 NRRQVIASDLVLHHPHALTLFEDSVFWTDRGTHQVMQANKWHGRNQSVVMYSVPQPLGII 1691
Query: 209 ILQENKQAHNVTNHCDDKPC-HQSALCINLPSSHTCLCP 246
+ ++Q + N C C H L P ++C CP
Sbjct: 1692 AIHPSRQPSS-PNPCASATCSHLCLLSAQEPRHYSCACP 1729
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 17/246 (6%)
Query: 15 EMNLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------ 67
+ N +T++S+ L +AVDWV + LYW DA + + VS LEGR+++ L
Sbjct: 3260 KTNQETIISHRLRRAESLAVDWVSRKLYWLDA---ILDCLFVSDLEGRQRKMLAQHCVDA 3316
Query: 68 -NTG-LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY 125
NT P I L P G ++W + G I+ +DG NK ++ I+WP ITIDY
Sbjct: 3317 NNTFCFENPRGIVLHPQRGYVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPNAITIDY 3376
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILK 185
+ LYWAD IE +L G R VY + P+ L +FED ++++ + T + K
Sbjct: 3377 TNDLLYWADAHLGYIEFSDLEGHHRHTVY--DGTLPHPFALTIFEDTVFWTDWNTRTVEK 3434
Query: 186 INKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSH--TC 243
NK+ S VL N ++ D+ +L +Q ++N C S LC+ TC
Sbjct: 3435 GNKYDGSGRVVLVNTTHKPFDIHVLHPYRQPI-MSNPCATNNGGCSHLCLIKAGGRGFTC 3493
Query: 244 LCPDHL 249
CPD
Sbjct: 3494 ECPDDF 3499
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 19/274 (6%)
Query: 2 ASISSGNVTRVKREMNLKTVLS--NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE 59
+ +S + + K + K V++ L + ++ DW+ +NLYWTD G +S + V L
Sbjct: 757 SDLSKNIIYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGGSKS---VTVMKLA 813
Query: 60 GRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPT 119
+ +R ++ + LN P I + P +G MF ++ +I A DG + +V+ ++ WP
Sbjct: 814 DKSRRQII-SNLNNPRSIVVHPAAGYMFLSDWFRPAKIMRAWSDGSHLMPIVNTSLGWPN 872
Query: 120 GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR 179
G+ ID+ + RLYW D IE NL+G DR + H D P+ L VF+DN++ + +R
Sbjct: 873 GLAIDWSTSRLYWVDAFFDKIEHSNLDGLDRKRLGHV-DQMTHPFGLTVFKDNVFLTDWR 931
Query: 180 TNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ----SALCI 235
I+++ K D V+ ++ V + Q TN+C + H S C
Sbjct: 932 LGAIIRVRKSDGGDMTVVRRGISSIMHVKAYDADLQTG--TNYC-SQTTHPNGDCSHFCF 988
Query: 236 NLPS-SHTCLCPDHLTEELNVTSGKMSCKVAPAR 268
+P+ C CP + + +M+C+ PAR
Sbjct: 989 PVPNFQRVCGCP----YGMKLQRDQMTCEGDPAR 1018
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 16 MNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74
+N + +L+ ++ P +AVDW+ LY + N I V LEG ++ TL+ L P
Sbjct: 455 LNTQEILNVSIDAPENLAVDWINNKLYLVET---RVNRIDVVNLEGNQRVTLITENLGHP 511
Query: 75 YDIALEPLSGRMF---WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLY 131
IAL+P G +F W L +P++ A +DG N+ +LV + WP GIT+D S+R+Y
Sbjct: 512 RGIALDPTVGYLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVY 571
Query: 132 WADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGN 191
W D + IE++ +G R V P+ + +FE++++F+ + ++K NKF +
Sbjct: 572 WVDSRYDYIETVTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKANKFTD 631
Query: 192 SDFNVLANNLNRASDVLILQENKQAHNVTNHC 223
++ V + V + +Q N TN C
Sbjct: 632 TNPQVYHQSSLTPFGVTVYHALRQP-NATNPC 662
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+LSN+ G+A DW+ + +Y++D SN + S E R ++ +++P I L+
Sbjct: 2462 LLSNIGVTDGIAFDWINRRIYYSDF----SNQTINSMAEDGSNRAVI-ARVSKPRAIVLD 2516
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P G M+WT+ G +I A++ G + +V+ ++ WP G+T+D + LYWAD + I
Sbjct: 2517 PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASLQKI 2576
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E L G +R VV T + + L V+ +Y++ + T I + NK+ SD +
Sbjct: 2577 ERSTLTGSNREVVIST---AFHSFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAMTTR 2633
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
L + Q +N CD S +C P+ C CP
Sbjct: 2634 LPTQPSGISTVVKTQQQQCSNPCDQFNGGCSHICAPGPNGAECQCP 2679
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 5 SSGNVTRVKRE----MNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
SS + R+K N+ T + RGVAVDWV NLY+T+A + I V +
Sbjct: 2121 SSNGIRRIKPNGSNFTNIVTYGIGANGIRGVAVDWVAGNLYFTNAFVYETL-IEVIRINT 2179
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
+R LL ++ P I ++P +FW + G KP+I + +D N+ LV I P G
Sbjct: 2180 TYRRVLLKVSVDMPRHIVVDPKHRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRG 2239
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
+ +D+ + +YW D I I+ +G + VV + PY + VF +++ +
Sbjct: 2240 LAVDHDTGYIYWVDDSLDIIARIHRDGGESQVVRYGS-RYPTPYGITVFGESIIWVDRNL 2298
Query: 181 NNILKINKF-GNSD-FNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ-----SAL 233
+ + +K GN+D V+ +++N DV I E+ Q + ++ PC Q S
Sbjct: 2299 RKVFQASKQPGNTDPPTVIRDSINLLRDVTIFDEHVQPLSPA-ELNNNPCLQSNGGCSHF 2357
Query: 234 CINLPSSHTCLC 245
C LP T C
Sbjct: 2358 CFALPELPTPKC 2369
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 21/246 (8%)
Query: 7 GNVTRVKREMNLKTVLS---NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--R 61
G + RVK + + +T + L G+A+DWV +N+Y+T RS I V TL G R
Sbjct: 1800 GEIHRVKTDGSNRTAFAPLSLLGSSLGLALDWVSRNIYYTTPASRS---IEVLTLRGDTR 1856
Query: 62 KKRTLLNT-----GLNEPYDIALEPLSGRMFW----TELGIKPRISGASIDGKNKFNLVD 112
+TL+ G+ P IA++P G+++W T+ G+ +I+ A++DG + L
Sbjct: 1857 YGKTLITNDGTPLGVGFPVGIAVDPARGKLYWSDHGTDSGVPAKIASANMDGTSLKILFT 1916
Query: 113 NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDN 172
N++ +T+D Q+LYWA IE N++G +R ++ H + P+ L V
Sbjct: 1917 GNMEHLEVVTLDIQEQKLYWAVTSRGVIERGNVDGTERMILVH---HLAHPWGLVVHGSF 1973
Query: 173 LYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA 232
LY+S + I +++K S+ V +N+ + + ++ A + +N C + P
Sbjct: 1974 LYYSDEQYEVIERVDKSSGSNKVVFRDNIPYLRGLRVYH-HRNAADSSNGCSNNPNACQQ 2032
Query: 233 LCINLP 238
+C+ +P
Sbjct: 2033 ICLPVP 2038
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 52 NIMVSTLEGRKKRTLL---NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKF 108
+++V L GR R L N G+ D + R+FWT+ ++ ++ I+G N
Sbjct: 402 DLLVGDLHGRNFRILAESKNRGIVMGVDFHYQ--KHRVFWTD-PMQAKVFSTDINGLNTQ 458
Query: 109 NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY-KPYKLE 167
+++ +I P + +D+ + +LY + + I+ +NL G R V TE+ G+ + L+
Sbjct: 459 EILNVSIDAPENLAVDWINNKLYLVETRVNRIDVVNLEGNQR-VTLITENLGHPRGIALD 517
Query: 168 VFEDNLYFSTY 178
L+FS +
Sbjct: 518 PTVGYLFFSDW 528
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
+ S+ + + + + + V++ + PR + +D +YWTD G ++ I +TL G
Sbjct: 2484 SDFSNQTINSMAEDGSNRAVIARVSKPRAIVLDPCRGYMYWTDWG--TNAKIERATLGGN 2541
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ ++NT L P + L+ + ++W + ++ +I +++ G N+ ++ G+
Sbjct: 2542 FRVPIVNTSLVWPNGLTLDLETDLLYWADASLQ-KIERSTLTGSNREVVISTAFH-SFGL 2599
Query: 122 TIDYPSQRLYWADPKARTIESIN-LNGKDRFVV 153
T+ Q +YW D + I N +G D +
Sbjct: 2600 TV--YGQYIYWTDFYTKKIYRANKYDGSDLIAM 2630
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ + ++GR+FW++L ++ + A +G +K + D+ + I +D+ + +YW D
Sbjct: 1472 LDFDSVTGRVFWSDL-LEGKTWSAFQNGTDKRVVHDSGLSLTEMIAVDWIGRNIYWTDYT 1530
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEV---FEDNLYF 175
TIE ++G R V+ N KP L + DN+ F
Sbjct: 1531 LETIEVSKIDGSHRTVL--ISKNVTKPRGLALDPRMGDNVMF 1570
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 120 GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR 179
G+ Y R++W DP + S ++NG + + + + + ++ + LY R
Sbjct: 427 GVDFHYQKHRVFWTDPMQAKVFSTDINGLNTQEILNVSIDAPENLAVDWINNKLYLVETR 486
Query: 180 TNNILKINKFGNSDFNVLANNLNRASDVLI 209
N I +N GN ++ NL + +
Sbjct: 487 VNRIDVVNLEGNQRVTLITENLGHPRGIAL 516
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 164/334 (49%), Gaps = 58/334 (17%)
Query: 14 REMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNE 73
RE++L L L P G+AVDWVG+++YW+DA S I V+TL+GR ++ L+ T L++
Sbjct: 4134 REVDLG--LKYLMQPDGLAVDWVGRHIYWSDA---KSQRIEVATLDGRYRKWLITTQLDQ 4188
Query: 74 PYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS-QRLYW 132
P IA+ P G MFWT+ G +P+I A ++G+++ LV N+ WP G++IDY + R+YW
Sbjct: 4189 PAAIAVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYW 4248
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
+D K IE+I +G DR ++ + KP+ L++FED LY+ + + NKFG
Sbjct: 4249 SDSKEDVIEAIKYDGTDRRLII---NEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKE 4305
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--SALCINLPSSHTCLCPDHLT 250
+ + + V I + + +V+N PC Q S LC+ P ++C CP
Sbjct: 4306 NKEKVLVVNPWLTQVRIFHQLRYNQSVSN-----PCKQVCSHLCLLRPGGYSCACPQGSD 4360
Query: 251 EELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPAR 310
VT + C A EL VT P R
Sbjct: 4361 ---FVTGSTVQCDAA---------------------------SELPVT------MPPPCR 4384
Query: 311 TCYLDCNH-GTCEFDDDFDPHCICQENFYGTYCE 343
C H G C FD++ P C C + G YCE
Sbjct: 4385 -----CMHGGNCYFDENELPKCKCSSGYSGEYCE 4413
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 7/219 (3%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR--MFW 88
+AVDW+G+NLYWTD + I VS ++G + L++ + +P +AL+P G MFW
Sbjct: 1515 IAVDWIGRNLYWTDYALET---IEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVMFW 1571
Query: 89 TELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148
++ G PRI AS+DG + +V I WP G++IDYP++ +Y+ D IE + +G
Sbjct: 1572 SDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGH 1631
Query: 149 DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVL 208
+R V ++ + P+ L +FED +Y++ T +++ NK+ + +V+ ++++ +
Sbjct: 1632 NRRQVIASDLVLHHPHALTLFEDFVYWTDRGTRQVMQANKWHGGNQSVVMYSVHQPLGIT 1691
Query: 209 ILQENKQAHNVTNHCDDKPC-HQSALCINLPSSHTCLCP 246
+ ++Q + N C C H L P ++C CP
Sbjct: 1692 AIHPSRQPPS-RNPCASASCSHLCLLSAQAPRHYSCACP 1729
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 17/246 (6%)
Query: 15 EMNLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------ 67
+ N +T++++ L +AVDWV + LYW DA + + VS LEGR ++ +
Sbjct: 3260 KTNRETIINHRLRRAESLAVDWVSRKLYWLDA---ILDCLFVSDLEGRHRKMIAQHCVDA 3316
Query: 68 -NTG-LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY 125
NT P I L P G ++W + G+ I +DG NK ++ I+WP ITIDY
Sbjct: 3317 NNTFCFEHPRGIVLHPQRGHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDY 3376
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILK 185
+ LYWAD IE +L G R VY + + P+ L +FED ++++ + T + K
Sbjct: 3377 TNDLLYWADAHLGYIEFSDLEGHHRHTVY--DGSLPHPFALTIFEDTVFWTDWNTRTVEK 3434
Query: 186 INKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSH--TC 243
NK+ S VL N ++ D+ + +Q ++N C S LC+ TC
Sbjct: 3435 GNKYDGSGRVVLVNTTHKPFDIHVYHPYRQPI-MSNPCGTNNGGCSHLCLIKAGGRGFTC 3493
Query: 244 LCPDHL 249
CPD
Sbjct: 3494 ACPDDF 3499
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 16 MNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74
+N + +L+ ++ P +AVDW+ LY + N I V LEG ++ TL+ L P
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVET---KVNRIDVVNLEGNQRVTLITENLGHP 511
Query: 75 YDIALEPLSGRMF---WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLY 131
IAL+P G +F W L +P++ A +DG N+ +LV + WP GIT+D S+R+Y
Sbjct: 512 RGIALDPTVGYLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVY 571
Query: 132 WADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGN 191
W D + IE++ +G R V P+ + +FE++++F+ + ++K +KF
Sbjct: 572 WVDSRYDYIETVTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKASKFTE 631
Query: 192 SDFNVLANNLNRASDVLILQENKQAHNVTNHC 223
++ V + R V + +Q N TN C
Sbjct: 632 TNPQVYHQSSLRPHGVTVYHALRQP-NATNPC 662
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTE 90
+ DW+ +NLYWTD G +S + V L + +R ++ + LN P I + P +G MF ++
Sbjct: 788 LTFDWISRNLYWTDGGLKS---VTVLRLADKSRRQII-SNLNNPRSIVVHPTAGYMFLSD 843
Query: 91 LGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR 150
+I A DG + +V+ ++ WP G+ ID+ + RLYW D IE L+G DR
Sbjct: 844 WFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDR 903
Query: 151 FVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210
+ H D P+ L VF+DN++ + +R I+++ K D V+ ++ V
Sbjct: 904 KRLGHV-DQMTHPFGLTVFKDNVFITDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAY 962
Query: 211 QENKQAHNVTNHCDDKPCHQ----SALCINLPS-SHTCLCPDHLTEELNVTSGKMSCKVA 265
+ Q +N+C + H S C +P+ C CP + + +M+C+
Sbjct: 963 DADLQTG--SNYC-SQTTHANGDCSHFCFPVPNFQRVCGCP----YGMKLQRDQMTCEGD 1015
Query: 266 PAR 268
PAR
Sbjct: 1016 PAR 1018
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
+LSN+ G+A DW+ + +Y++D SN + S E R ++ +++P I L
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDF----SNQTINSMAEDGSNRAVI-ARVSKPRAIVL 2515
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P G M+WT+ G +I A++ G + +V+ ++ WP G+ +D + LYWAD +
Sbjct: 2516 DPCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQK 2575
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
IE L G +R VV T + + L V+ +Y++ T I + NK+ SD +
Sbjct: 2576 IERSTLTGTNREVVVST---AFHSFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAMTT 2632
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
L + Q +N CD S +C P+ C CP
Sbjct: 2633 RLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCP 2679
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 5 SSGNVTRVKRE----MNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
SS + R+K + N+ T + RGVA+DW NLY+T+A + I V +
Sbjct: 2121 SSNGIRRIKPDGSNFTNVVTYGIGANGIRGVALDWAAGNLYFTNAFVYETL-IEVLRINT 2179
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
+R LL ++ P I ++P +FW + G KP+I + +D N+ LV I P G
Sbjct: 2180 TYRRVLLKVSVDMPRHIIVDPKHRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRG 2239
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
+ +D+ + +YW D I I+L+G + VV + PY + VF +++ +
Sbjct: 2240 LAMDHDTGYIYWVDDSLDLIARIHLDGGESQVVRYGS-RYPTPYGITVFGESIIWVDRNL 2298
Query: 181 NNILKINKF-GNSDFN-VLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ-----SAL 233
+ + +K GN+D V+ + +N DV I E+ Q + ++ PC Q S
Sbjct: 2299 KKVFQASKQPGNTDPPVVIRDKINLLRDVTIFDEHAQPLSPA-ELNNNPCLQSNGGCSHF 2357
Query: 234 CINLPSSHTCLC 245
C LP T C
Sbjct: 2358 CFALPELPTPRC 2369
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 21/246 (8%)
Query: 7 GNVTRVKREMNLKTVLS---NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--R 61
G + RVK + + +TV + L G+A+DWV +N+Y+T RS I V TL+G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRS---IEVLTLKGDTR 1856
Query: 62 KKRTLLNT-----GLNEPYDIALEPLSGRMFW----TELGIKPRISGASIDGKNKFNLVD 112
+TL+ G+ P IA++P G+++W T+ G+ +I+ A++DG + L
Sbjct: 1857 YGKTLIANDGTPLGVGFPVGIAVDPARGKLYWSDHGTDSGVPAKIASANMDGTSLKILFT 1916
Query: 113 NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDN 172
N+Q +T+D Q+LYWA IE N++G +R ++ H + P+ L V+
Sbjct: 1917 GNLQHLEVVTLDIQEQKLYWAVTSRGVIERGNVDGTERMILVH---HLAHPWGLVVYGSF 1973
Query: 173 LYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA 232
LY+S + I +++K ++ VL +N+ + + + A + +N C + P
Sbjct: 1974 LYYSDEQYEVIERVDKSSGNNKVVLRDNVPYLRGLRVYHR-RNAADSSNGCSNNPNACQQ 2032
Query: 233 LCINLP 238
+C+ +P
Sbjct: 2033 ICLPVP 2038
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
+ S+ + + + + + V++ + PR + +D +YWTD G ++ I +TL G
Sbjct: 2484 SDFSNQTINSMAEDGSNRAVIARVSKPRAIVLDPCRGYMYWTDWG--TNAKIERATLGGN 2541
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ ++NT L P +AL+ + ++W + ++ +I +++ G N+ +V G+
Sbjct: 2542 FRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-KIERSTLTGTNREVVVSTAFH-SFGL 2599
Query: 122 TIDYPSQRLYWADPKARTIESIN 144
T+ Q +YW D R I N
Sbjct: 2600 TV--YGQYIYWTDLYTRKIYRAN 2620
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 52 NIMVSTLEGRKKRTLL---NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKF 108
+++V L GR R L N G+ D + R+FWT+ ++ ++ I+G N
Sbjct: 402 DLLVGDLHGRNFRILAESKNRGMVMGVDFHYQ--KHRVFWTD-PMQEKVFSTDINGLNTQ 458
Query: 109 NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY-KPYKLE 167
+++ ++ P + +D+ + +LY + K I+ +NL G R V TE+ G+ + L+
Sbjct: 459 EILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQR-VTLITENLGHPRGIALD 517
Query: 168 VFEDNLYFSTY 178
L+FS +
Sbjct: 518 PTVGYLFFSDW 528
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+ + ++GR+FW++L ++ + +G +K + D+ + I +D+ + LYW D
Sbjct: 1472 LDFDSVTGRVFWSDL-LQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYA 1530
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEV---FEDNLYF 175
TIE ++G R V+ N KP L + DN+ F
Sbjct: 1531 LETIEVSKIDGSHRTVL--ISKNVTKPRGLALDPRMGDNVMF 1570
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 38/90 (42%)
Query: 120 GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR 179
G+ Y R++W DP + S ++NG + + + + + ++ + LY +
Sbjct: 427 GVDFHYQKHRVFWTDPMQEKVFSTDINGLNTQEILNVSVDTPENLAVDWINNKLYLVETK 486
Query: 180 TNNILKINKFGNSDFNVLANNLNRASDVLI 209
N I +N GN ++ NL + +
Sbjct: 487 VNRIDVVNLEGNQRVTLITENLGHPRGIAL 516
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 18 LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG-LNEPYD 76
+ V ++L P G+A+DW LYW DA + I STL+G ++ L + + P+
Sbjct: 861 MPIVNTSLGWPNGLAIDWSASRLYWVDA---FFDKIEHSTLDGLDRKRLGHVDQMTHPFG 917
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKN 106
+ + +F T+ + I DG +
Sbjct: 918 LTV--FKDNVFITDWRLGAIIRVRKSDGGD 945
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 85 RMFWTEL--GIKPRISGASI-DGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIE 141
R+F+T+ ++ +IS S+ G + ++ +NI GI D+ ++R+Y++D +TI
Sbjct: 2433 RIFFTQKLNSLRGQISYVSLYSGSSSPTVLLSNIGVTDGIAFDWINRRIYYSDFSNQTIN 2492
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFG 190
S+ +G +R V+ + L+ +Y++ + TN ++ G
Sbjct: 2493 SMAEDGSNRAVIARVSKP--RAIVLDPCRGYMYWTDWGTNAKIERATLG 2539
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
I + +F+++L K I IDG K + N ++ +T D+ S+ LYW D
Sbjct: 745 IDFDAQHSTVFYSDLS-KDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 137 ARTIESINLNGKDR 150
+++ + L K R
Sbjct: 804 LKSVTVLRLADKSR 817
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++ V+S L P G+AVDWV LYWTD+G ++ I V+ L+G ++ LL L +P
Sbjct: 501 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSG---TSRIEVANLDGAHRKVLLWQSLEKPR 557
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IAL P+ G ++WT+ G PRI +S+DG + + D ++ WP G+TIDY +R+YW D
Sbjct: 558 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 617
Query: 136 KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFN 195
K IE NL+G R V P+ + VFED+LY++ + T +I NKF +
Sbjct: 618 KHHVIERANLDGSHRKAV--ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 675
Query: 196 VLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
++ N L+ D+ L +Q N C D + LC+ ++TC CP
Sbjct: 676 IIRNKLHFPMDIHTLHPQRQPAG-KNRCGDNNGGCTHLCLPSGQNYTCACP 725
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 135/247 (54%), Gaps = 11/247 (4%)
Query: 4 ISSGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
+S+ ++R K + + V+ ++L P G+A+DWV LYWTDAG ++ I V+ +G
Sbjct: 792 VSTDTISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAG---TDRIEVANTDGS 848
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ L+ L+ P DI +EP+ G M+WT+ G P+I A +D N+ ++ +N+ WP G+
Sbjct: 849 MRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASNRQVIISSNLTWPNGL 908
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
IDY SQRLYWAD +TIE L+G R V+ ++ P+ L ++ +Y++ ++T
Sbjct: 909 AIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQ--LPHPFGLTLYGQRIYWTDWQTK 966
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCIN--LPS 239
+I ++ D L NL D+ + ++Q VT C + S LC+ PS
Sbjct: 967 SIQSADRLTGLDRETLQENLENLMDIHVF--HRQRPPVTTPCAVENGGCSHLCLRSPSPS 1024
Query: 240 SHTCLCP 246
+C CP
Sbjct: 1025 GFSCTCP 1031
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++TV+ + L G+AVDWV +NLYWTD G N I S L+G ++ L+N L+EP
Sbjct: 1418 NMETVIGHGLKTTDGLAVDWVARNLYWTDTG---RNTIEASRLDGSCRKVLINNSLDEPR 1474
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IA+ P G +FWT+ G +I A++DG + L++ ++ WP G+T+DY ++R+YW D
Sbjct: 1475 AIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDA 1534
Query: 136 KARTIESINLNGKDRFV-VYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194
IES +LNGK R V V H P+ L + +Y++ ++T +I +++K+ +
Sbjct: 1535 HLDRIESADLNGKLRQVLVSHVS----HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNK 1590
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDH 248
+ N+ D++++ +Q TN C S LC S C CPD
Sbjct: 1591 ETVLANVEGLMDIIVVSPQRQTG--TNACGVNNGGCSHLCFARASDFVCACPDE 1642
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 8/226 (3%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ + L G+AVD +G+ +YWTD G +N I V L+G ++ L+ L+ P I L
Sbjct: 1119 ITTGLQTTDGLAVDAIGRKVYWTDTG---TNRIEVGNLDGSMRKVLVWQNLDSPRAIVLY 1175
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
G M+WT+ G ++ + +DG ++ L++NN+ WP G+T+D S +L WAD I
Sbjct: 1176 HEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERI 1235
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E +LNG +R + + PY L + + +Y++ ++T +I + +K S+ ++ +N
Sbjct: 1236 EVADLNGANRHTLVSPVQH---PYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSN 1292
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
L D+ + + N C + S LC+ PS +C CP
Sbjct: 1293 LPGLMDIQAVDRAQPLG--FNKCGSRNGGCSHLCLPRPSGFSCACP 1336
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
+N + I ++PL G+++W++ + RIS AS+DG +++ +Q G+ +D
Sbjct: 1076 INMTMKNTIAIGVDPLEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLAVDAI 1134
Query: 127 SQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKI 186
+++YW D IE NL+G R V+ + + L +Y++ + N L+
Sbjct: 1135 GRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLER 1194
Query: 187 NKFGNSDFNVLANN 200
+ SD VL NN
Sbjct: 1195 SGMDGSDRTVLINN 1208
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 57 TLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQ 116
L R + TLL L + +FW+++ + RI A+++G N +V ++
Sbjct: 453 VLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLE 511
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ +D+ +LYW D IE NL+G R V+ + L E +Y++
Sbjct: 512 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT 571
Query: 177 TYRTNNILKINKFGNSDFNVLAN 199
+ ++ + S ++A+
Sbjct: 572 DWGNTPRIEASSMDGSGRRIIAD 594
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 70 GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQR 129
GLN + + + G++++T++ + I A ++G N ++ + ++ G+ +D+ ++
Sbjct: 1383 GLNNVISLDYDSVDGKVYYTDVFLDV-IRRADLNGSNMETVIGHGLKTTDGLAVDWVARN 1441
Query: 130 LYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK- 188
LYW D TIE+ L+G R V+ + + +P + VF Y +I KI +
Sbjct: 1442 LYWTDTGRNTIEASRLDGSCRKVLINNSLD--EPRAIAVFPRKGYLFWTDWGHIAKIERA 1499
Query: 189 -FGNSDFNVLAN-NLNRASDVLILQENKQAHNVTNHCD 224
S+ VL N +L + + + + ++ + V H D
Sbjct: 1500 NLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLD 1537
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++ V+S L P G+AVDWV LYWTD+G ++ I V+ L+G ++ LL L +P
Sbjct: 501 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSG---TSRIEVANLDGAHRKVLLWQSLEKPR 557
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IAL P+ G ++WT+ G PRI +S+DG + + D ++ WP G+TIDY +R+YW D
Sbjct: 558 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 617
Query: 136 KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFN 195
K IE NL+G R V P+ + VFED+LY++ + T +I NKF +
Sbjct: 618 KHHVIERANLDGSHRKAV--ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 675
Query: 196 VLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
++ N L+ D+ L +Q N C D + LC+ ++TC CP
Sbjct: 676 IIRNKLHFPMDIHTLHPQRQPAG-KNRCGDNNGGCTHLCLPSGQNYTCACP 725
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 135/247 (54%), Gaps = 11/247 (4%)
Query: 4 ISSGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
+S+ ++R K + + V+ ++L P G+A+DWV LYWTDAG ++ I V+ +G
Sbjct: 792 VSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAG---TDRIEVANTDGS 848
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ L+ L+ P DI +EP+ G M+WT+ G P+I A +D ++ ++ +N+ WP G+
Sbjct: 849 MRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASSRQVIISSNLTWPNGL 908
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
IDY SQRLYWAD +TIE L+G R V+ ++ P+ L ++ +Y++ ++T
Sbjct: 909 AIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQ--LPHPFGLTLYGQRIYWTDWQTK 966
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINL--PS 239
+I ++ D L NL D+ + ++Q VT C + S LC+ PS
Sbjct: 967 SIQSADRLTGLDRETLQENLENLMDIHVF--HRQRPPVTTLCAVENGGCSHLCLRSPNPS 1024
Query: 240 SHTCLCP 246
+C CP
Sbjct: 1025 GFSCTCP 1031
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++TV+ + L G+AVDWV +NLYWTD G N I S L+G ++ L+N L+EP
Sbjct: 1418 NMETVIGHGLKTTDGLAVDWVARNLYWTDTG---RNTIEASRLDGSCRKVLINNSLDEPR 1474
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IA+ P G +FWT+ G +I A++DG + L++ ++ WP G+T+DY ++R+YW D
Sbjct: 1475 AIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDA 1534
Query: 136 KARTIESINLNGKDRFV-VYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194
IES +LNGK R V V H P+ L + +Y++ ++T +I +++K+ +
Sbjct: 1535 HLDRIESADLNGKLRQVLVSHVS----HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNK 1590
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDH 248
+ N+ D++++ +Q TN C + LC S C CPD
Sbjct: 1591 ETVLANVEGLMDIIVVSPQRQTG--TNACGVNNGGCTHLCFARASDFVCACPDE 1642
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 8/226 (3%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ + L G+AVD +G+ +YWTD G +N I V L+G ++ L+ L+ P I L
Sbjct: 1119 ITTGLQTTDGLAVDAIGRKVYWTDTG---TNRIEVGNLDGSMRKVLVWQNLDSPRAIVLY 1175
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
G M+WT+ G ++ + +DG ++ L++NN+ WP G+T+D S +L WAD I
Sbjct: 1176 HEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERI 1235
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E +LNG +R + + PY L + + +Y++ ++T +I + +K S+ ++ +N
Sbjct: 1236 EVADLNGANRHTLVSPVQH---PYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSN 1292
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
L D+ + + N C + S LC+ PS +C CP
Sbjct: 1293 LPGLMDIQAVDRAQPLG--FNKCGSRNGGCSHLCLPRPSGFSCACP 1336
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
+N + I ++PL G+++W++ + RIS AS+DG +++ +Q G+ +D
Sbjct: 1076 INMTMKNTIAIGVDPLEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLAVDAI 1134
Query: 127 SQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKI 186
+++YW D IE NL+G R V+ + + L +Y++ + N L+
Sbjct: 1135 GRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLER 1194
Query: 187 NKFGNSDFNVLANN 200
+ SD VL NN
Sbjct: 1195 SGMDGSDRTVLINN 1208
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 57 TLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQ 116
L R + TLL L + +FW+++ + RI A+++G N +V ++
Sbjct: 453 VLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLE 511
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ +D+ +LYW D IE NL+G R V+ + L E +Y++
Sbjct: 512 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT 571
Query: 177 TYRTNNILKINKFGNSDFNVLAN 199
+ ++ + S ++A+
Sbjct: 572 DWGNTPRIEASSMDGSGRRIIAD 594
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 70 GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQR 129
GLN + + + G++++T++ + I A ++G N ++ + ++ G+ +D+ ++
Sbjct: 1383 GLNNVISLDYDSVHGKVYYTDVFLDV-IRRADLNGSNMETVIGHGLKTTDGLAVDWVARN 1441
Query: 130 LYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK- 188
LYW D TIE+ L+G R V+ + + +P + VF Y +I KI +
Sbjct: 1442 LYWTDTGRNTIEASRLDGSCRKVLINNSLD--EPRAIAVFPRKGYLFWTDWGHIAKIERA 1499
Query: 189 -FGNSDFNVLAN-NLNRASDVLILQENKQAHNVTNHCD 224
S+ VL N +L + + + + ++ + V H D
Sbjct: 1500 NLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1537
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 15/245 (6%)
Query: 16 MNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74
++ T++S +LH P G+AVDW+ +N+YWTD+ ++ V+ +G K+RTL + P
Sbjct: 463 LSYDTIISEDLHAPDGLAVDWIHRNIYWTDS---VPGSVSVADTKGVKRRTLFQEAGSRP 519
Query: 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWAD 134
I ++P+ G M+WT+ G +I ++G + +LV NIQWP GIT+D S RLYW D
Sbjct: 520 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVD 579
Query: 135 PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194
K +I SI++NG +R + E+ P+ L ++ED +Y++ I N+ SD
Sbjct: 580 SKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDVINEAIFSANRLTGSDV 639
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA----LCINLPS------SHTCL 244
N++A NL D+++ + Q V N C+ + LC+ P TC
Sbjct: 640 NLVAENLLSPEDIVLFHKVTQPRGV-NWCETTALLPNGGCQYLCLPAPQIGPHSPKFTCA 698
Query: 245 CPDHL 249
CPD +
Sbjct: 699 CPDGM 703
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++ V+S L P G+AVDWV LYWTD+G ++ I V+ L+G ++ LL L +P
Sbjct: 501 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSG---TSRIEVANLDGAHRKVLLWQNLEKPR 557
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IAL P+ G ++WT+ G PRI +S+DG + + D ++ WP G+TIDY +R+YW D
Sbjct: 558 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 617
Query: 136 KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFN 195
K IE NL+G R V P+ + VFED+LY++ + T +I NKF +
Sbjct: 618 KHHVIERANLDGSHRKAV--ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 675
Query: 196 VLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
++ N L+ D+ L +Q N C D + LC+ ++TC CP
Sbjct: 676 IIRNKLHFPMDIHTLHPQRQPAG-KNRCGDNNGGCTHLCLPSGQNYTCACP 725
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 7/245 (2%)
Query: 4 ISSGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61
+S+ ++R K + + V+ ++L P G+A+DWV LYWTDAG ++ I V+ +G
Sbjct: 792 VSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAG---TDRIEVANTDGS 848
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ L+ L+ P DI +EP+ G M+WT+ G P+I A +D + ++ +N+ WP G+
Sbjct: 849 MRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGL 908
Query: 122 TIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181
IDY SQRLYWAD +TIE L+G R V+ ++ P+ L ++ + +Y++ ++T
Sbjct: 909 AIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQ--LPHPFGLTLYGERIYWTDWQTK 966
Query: 182 NILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSH 241
+I ++ D L NL D+ + + + ++ C L PS
Sbjct: 967 SIQSADRLTGLDRETLQENLENLMDIHVFHRRRPPVSTPCAMENGGCSHLCLRSPNPSGF 1026
Query: 242 TCLCP 246
+C CP
Sbjct: 1027 SCTCP 1031
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 128/234 (54%), Gaps = 11/234 (4%)
Query: 17 NLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPY 75
N++TV+ L G+AVDWV +NLYWTD G N I S L+G ++ L+N L+EP
Sbjct: 1418 NMETVIGRGLKTTDGLAVDWVARNLYWTDTG---RNTIEASRLDGSCRKVLINNSLDEPR 1474
Query: 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP 135
IA+ P G +FWT+ G +I A++DG + L++ ++ WP G+T+DY ++R+YW D
Sbjct: 1475 AIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDA 1534
Query: 136 KARTIESINLNGKDRFV-VYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194
IES +LNGK R V V H P+ L + +Y++ ++T +I +++K+ +
Sbjct: 1535 HLDRIESADLNGKLRQVLVSHVS----HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNK 1590
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDH 248
+ N+ D++++ +Q TN C + LC S C CPD
Sbjct: 1591 ETVLANVEGLMDIIVVSPQRQTG--TNACGVNNGGCTHLCFARASDFVCACPDE 1642
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 13/247 (5%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
+ IS N+ + E + + L G+AVD +G+ +YWTD G +N I V L+G
Sbjct: 1102 LHRISRANLDGSQHE---DIITTGLQTTDGLAVDAIGRKVYWTDTG---TNRIEVGNLDG 1155
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
++ L+ L+ P I L G M+WT+ G ++ + +DG ++ L++NN+ WP G
Sbjct: 1156 SMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNG 1215
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
+T+D S +L WAD IE+ +LNG +R + + PY L + + +Y++ ++T
Sbjct: 1216 LTVDKASSQLLWADAHTERIEAADLNGANRHTLVSPVQH---PYGLTLLDSYIYWTDWQT 1272
Query: 181 NNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVT-NHCDDKPCHQSALCINLPS 239
+I + +K S+ ++ +NL ++ +Q +A + N C + S LC+ PS
Sbjct: 1273 RSIHRADKGTGSNVILVRSNL---PGLMDMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPS 1329
Query: 240 SHTCLCP 246
+C CP
Sbjct: 1330 GFSCACP 1336
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 67 LNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
+N + I ++P G+++W++ + RIS A++DG +++ +Q G+ +D
Sbjct: 1076 INITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLAVDAI 1134
Query: 127 SQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKI 186
+++YW D IE NL+G R V+ + + L +Y++ + N L+
Sbjct: 1135 GRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLER 1194
Query: 187 NKFGNSDFNVLANN 200
+ SD VL NN
Sbjct: 1195 SGMDGSDRAVLINN 1208
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 57 TLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQ 116
L R + TLL L + +FW+++ + RI A+++G N +V ++
Sbjct: 453 VLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLE 511
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ +D+ +LYW D IE NL+G R V+ + L E +Y++
Sbjct: 512 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWT 571
Query: 177 TYRTNNILKINKFGNSDFNVLAN 199
+ ++ + S ++A+
Sbjct: 572 DWGNTPRIEASSMDGSGRRIIAD 594
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 71 LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRL 130
LN + + + G++++T++ + I A ++G N ++ ++ G+ +D+ ++ L
Sbjct: 1384 LNNVISLDYDSVDGKVYYTDVFLDV-IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNL 1442
Query: 131 YWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK-- 188
YW D TIE+ L+G R V+ + + +P + VF Y +I KI +
Sbjct: 1443 YWTDTGRNTIEASRLDGSCRKVLINNSLD--EPRAIAVFPRKGYLFWTDWGHIAKIERAN 1500
Query: 189 FGNSDFNVLAN-NLNRASDVLILQENKQAHNVTNHCD 224
S+ VL N +L + + + + ++ + V H D
Sbjct: 1501 LDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1537
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 133/249 (53%), Gaps = 24/249 (9%)
Query: 16 MNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74
++ T++S +L P G+AVDW+ N+YWTD+ ++ V+ +G ++RTL + P
Sbjct: 463 LSYDTIISGDLQAPDGLAVDWIHGNIYWTDS---VPGSVSVADTKGIRRRTLFQEKGSRP 519
Query: 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWAD 134
DI ++P+ G M+WT+ G +I ++G + ++LV +IQWP GIT+D PS RLYW D
Sbjct: 520 RDIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVD 579
Query: 135 PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194
K +I SI++NG +R + E P+ L ++ED ++++ I N+ SD
Sbjct: 580 SKLHSISSIDVNGGNRKTILEDEKQLAHPFSLAIYEDKVFWTDVINEAIFSANRLTGSDV 639
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA--------LCINLPS------S 240
N++A NL D+++ HN+T C ++A LC+ P
Sbjct: 640 NLVAENLLSPEDIVLF------HNITQPRGVNWCERTALPNGGCQYLCLPAPQINPHSPK 693
Query: 241 HTCLCPDHL 249
TC CPD +
Sbjct: 694 FTCACPDGM 702
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 13/238 (5%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ +LH P G+AVDW+ N+YWTD+ + V+ +G ++RTL + P I ++
Sbjct: 469 ISGDLHAPDGLAVDWIHGNIYWTDS---VPGTVSVADTKGVRRRTLFREKGSRPRAIVVD 525
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P+ G M+WT+ G +I ++G + ++LV +IQWP GIT+D PS RLYW D K +I
Sbjct: 526 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSI 585
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
SI++NG R + E P+ L ++ED +Y++ I N+ SD N++A N
Sbjct: 586 SSIDVNGGGRKTILEDEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKN 645
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLP--SSH----TCLCPDHL 249
L D+++ Q V N C+ +C+ P S+H TC CPD +
Sbjct: 646 LMSPEDIVLFHNVTQPRGV-NWCEATVLPNGGCQYMCLPAPQISAHSPKFTCACPDGM 702
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/141 (17%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN---LVDNNIQW 117
R + T L L + E + R++W++L + +I A +D + ++ ++
Sbjct: 417 RSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQR-KIYSAVMDQGTSLSYDAIISGDLHA 475
Query: 118 PTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177
P G+ +D+ +YW D T+ + G R ++ + + + ++ +Y++
Sbjct: 476 PDGLAVDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMYWTD 535
Query: 178 YRTNNILKINKFGNSDFNVLA 198
+ T +K D L
Sbjct: 536 WGTPAKIKKGGLNGVDIYSLV 556
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 18/299 (6%)
Query: 4 ISSGNVTRVKREMNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK 62
I S + R + TV+S ++ P G+AVDW+ N+YWTD+ + V+ +G K
Sbjct: 451 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVK 507
Query: 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT 122
++TL ++P I ++P+ G M+WT+ G +I ++G + ++LV NIQWP GIT
Sbjct: 508 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 567
Query: 123 IDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
+D S RLYW D K +I SI++NG +R + E P+ L VFED ++++
Sbjct: 568 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEA 627
Query: 183 ILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLPS 239
I N+ SD N+LA NL D+++ Q V N C+ LC+ P
Sbjct: 628 IFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGV-NWCERTTLSNGGCQYLCLPAPQ 686
Query: 240 ------SHTCLCPDHLTEELN----VTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCP 288
TC CPD + + +T + + T L + + + HT P
Sbjct: 687 INPHSPKFTCACPDGMLLARDMRSCLTEAEAAVATQETSTVRLKVSSTAVRTQHTTTRP 745
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 13 KREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN 72
K E V+S L P G+A DW+G+ LYWTD+ +N I VS L+G ++ L L+
Sbjct: 82 KSESVQNVVVSGLLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSLRKVLFWQELD 138
Query: 73 EPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW 132
+P IAL+P SG M+WT+ G P+I A +DG ++F +++ I WP G+T+DY ++LYW
Sbjct: 139 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYW 198
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
AD K I NL+G +R V + + P+ L +FED LY++ + T++IL NK+
Sbjct: 199 ADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGE 256
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHC--DDKPCHQSALCINLPSS--HTCLCP 246
+ +N+ D+ + +Q N TN C D+ C S LC+ P + C CP
Sbjct: 257 GLREIHSNIFSPMDIHAFSQQRQP-NATNPCGIDNGGC--SHLCLMSPVKPFYQCACP 311
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 10/224 (4%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P G+AVDW+GKNLYW D G +N I VS L+G+ ++ L+ L+ P +AL+P G M+
Sbjct: 707 PEGMAVDWLGKNLYWADTG---TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMY 763
Query: 88 WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147
WTE G KP+I A++DG + LV N+ G+TIDY +RLYW D IES ++ G
Sbjct: 764 WTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLG 822
Query: 148 KDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDV 207
+R V+ D+ P+ L ++D +Y++ + +I + NK + ++ +L+ D+
Sbjct: 823 LNREVI---ADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDI 879
Query: 208 LILQENKQAHNVTNHCDDKPCHQSALCINLP-SSHTCLCPDHLT 250
L+ ++QA N C H S LC+ +P C CP H +
Sbjct: 880 LVFHSSRQAG--WNECASSNGHCSHLCLAVPVGGFVCGCPAHYS 921
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 18/232 (7%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
V + + P G+AVDWV +NLYWTD G ++ I V+ L G ++ L++ L EP I L
Sbjct: 397 VVTAQIAHPDGIAVDWVARNLYWTDTG---TDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P+ G M+WT+ G P+I A++DG ++ LV+ ++ WP G+ +DY +YW D K
Sbjct: 454 DPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDK 513
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
IE +N +G R V+ ED + + D +Y++ ++ +I +++K +++ V+ +
Sbjct: 514 IEVMNTDGTGRRVL--VEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHK-RSAEREVIID 570
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCINLPSSHTCLCP 246
L D++ L +A +V PC + S LC+ P C CP
Sbjct: 571 QL---PDLMGL----KATSVHRVIGSNPCAEDNGGCSHLCLYRPQGLRCACP 615
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 48/293 (16%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P +++D + +YWT ++N I V+ L+GR +L + P I + P G M+
Sbjct: 1016 PYDLSIDIYSRYIYWT---CEATNVIDVTRLDGRSVGVVLKGEQDRPRAIVVNPEKGYMY 1072
Query: 88 WTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146
+T L + P+I A++DG + L + + P + +D +L+WAD R IES +L+
Sbjct: 1073 FTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLS 1132
Query: 147 GKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASD 206
G +R V+ + N +P L VFE+ LY+ + I KI+ G + + + SD
Sbjct: 1133 GANRIVL--EDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSD 1190
Query: 207 V-----LILQENKQAHNVTNHCDDKPCHQ-----SALCINLPSSHT-CLCPDHLTEELNV 255
+ L LQE +Q PC Q S +C+ T C CP HL +
Sbjct: 1191 IHAVKELNLQEYRQ----------HPCAQDNGGCSHICLVKGDGTTRCSCPMHLV----L 1236
Query: 256 TSGKMSCKVAPA-----RTCY---LDCNHGNLPSSHTC----LCPDHLTEELN 296
++SC P TC+ +DC +P + C C DH ++ELN
Sbjct: 1237 LQDELSCGEPPTCSPQQFTCFTGDIDC----IPVAWRCDGFTECEDH-SDELN 1284
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
VTR+ M + +L +PR + +D + +YWTD G I + L+G + L+
Sbjct: 428 EVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWG--EIPKIERAALDGSDRVVLV 485
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI--DY 125
NT L P +AL+ G ++W + +I + DG + LV++ I G T+ DY
Sbjct: 486 NTSLGWPNGLALDYDEGTIYWGDAKTD-KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDY 544
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVV 153
+YW D + R+IE ++ +R V+
Sbjct: 545 ----VYWTDWQRRSIERVHKRSAEREVI 568
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
TG+ E + + R++WT++ +K IS A ++G ++V+ + +P G+ +D+ +
Sbjct: 659 TGVKEASALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 717
Query: 129 RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
LYWAD IE L+G+ R V+ + + + L+ E +Y++ + +
Sbjct: 718 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 777
Query: 189 FGNSDFNVLANNLNRASDVLI 209
S+ L N+ RA+ + I
Sbjct: 778 MDGSERTTLVPNVGRANGLTI 798
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
I +P+ G ++WT+ ++ I + IDG +V I P GI +D+ ++ LYW D
Sbjct: 365 IDYDPVEGYIYWTDDEVRA-IRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTG 423
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
IE LNG R ++ + + L+ +Y++ + ++ SD V
Sbjct: 424 TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV 483
Query: 197 LAN 199
L N
Sbjct: 484 LVN 486
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
T++ N+ G+ +D+ + LYWTD +N I S + G + + + + P+ L
Sbjct: 785 TLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSDMLGLNREVIAD---DLPHPFGL 838
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW 132
++WT+ + G+N+ ++ ++ + I + + S++ W
Sbjct: 839 TQYQDYIYWTDWSRRSIERANKTSGQNR-TIIQGHLDYVMDILVFHSSRQAGW 890
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 12/234 (5%)
Query: 14 REMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNE 73
+E++LK L + P G+AVDWVG+++YW+D + I V+ L+GR ++ L++T L++
Sbjct: 4132 QEVDLK--LKYVMQPDGIAVDWVGRHIYWSDVKNK---RIEVAKLDGRYRKWLISTDLDQ 4186
Query: 74 PYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY-PSQRLYW 132
P IA+ P G MFWT+ G +P+I A ++G+++ LV ++ WPTG++IDY + R+YW
Sbjct: 4187 PAAIAVNPKLGLMFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
+D K IE+I +G DR V+ N PY L++FED LY+ + + K NKFG
Sbjct: 4247 SDFKEDVIETIKYDGTDRRVIAKEAMN---PYSLDIFEDQLYWISKEKGEVWKQNKFGQG 4303
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
+ V I + + +V N C H LC+ P ++C CP
Sbjct: 4304 KKEKTLVVNPWLTQVRIFHQLRYNKSVPNLCKQICSH---LCLLRPGGYSCACP 4354
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR--MFW 88
+A+DWVG+NLYWTD + I VS ++G + L++ L P +AL+P +FW
Sbjct: 1514 IAIDWVGRNLYWTDYALET---IEVSKIDGSHRTVLISKNLTNPRGLALDPRMNEHLLFW 1570
Query: 89 TELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148
++ G PRI AS+DG + +V + I WP G+TIDYP++ LY+ D ++ + NG
Sbjct: 1571 SDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNGH 1630
Query: 149 DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVL 208
R V ++ PY L +FED++Y++ T +++ NK+ + +V+ N+ ++
Sbjct: 1631 HRRQVIASDLIIRHPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYNIQWPLGIV 1690
Query: 209 ILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCP 246
+ +KQ ++V + H L P ++C+CP
Sbjct: 1691 AVHPSKQPNSVNPCAFSRCSHLCLLSSQGPHFYSCVCP 1728
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 121/246 (49%), Gaps = 17/246 (6%)
Query: 15 EMNLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------ 67
+ N +T++++ L +AVDWV + LYW DA + + VS L G +R L
Sbjct: 3258 KTNKETIINHRLPAAESLAVDWVSRKLYWLDA---RLDGLFVSDLNGGHRRMLAQHCVDA 3314
Query: 68 -NTG-LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY 125
NT + P +AL P G ++W + G + I +DG NK ++ ++WP GITIDY
Sbjct: 3315 NNTFCFDNPRGLALHPQYGYLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDY 3374
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILK 185
+ LYWAD IE +L G R VY + P+ + +FED +Y++ + T + K
Sbjct: 3375 TNDLLYWADAHLGYIEYSDLEGHHRHTVY--DGALPHPFAITIFEDTIYWTDWNTRTVEK 3432
Query: 186 INKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP--SSHTC 243
NK+ S+ L N +R D+ + +Q V+N C S LC+ P TC
Sbjct: 3433 GNKYDGSNRQTLVNTTHRPFDIHVYHPYRQPI-VSNPCGTNNGGCSHLCLIKPGGKGFTC 3491
Query: 244 LCPDHL 249
CPD
Sbjct: 3492 ECPDDF 3497
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 16 MNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74
+N++ VL+ ++ P +AVDWV +Y + N I + L+G + TL+ L P
Sbjct: 456 LNIQEVLNVSVETPENLAVDWVNNKIYLVET---KVNRIDMVNLDGSYRVTLITENLGHP 512
Query: 75 YDIALEPLSGRMF---WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLY 131
IA++P G +F W L +P++ A +DG N+ +LV + WP G+T+D S+R+Y
Sbjct: 513 RGIAVDPTVGYLFFSDWESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVY 572
Query: 132 WADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGN 191
W D + IE++ +G R V H P+ + +FE ++F+ + +LK NKF
Sbjct: 573 WVDSRFDYIETVTYDGIQRKTVVHGGSLIPHPFGVSLFEGQVFFTDWTKMAVLKANKFTE 632
Query: 192 SDFNVLANNLNRASDVLILQENKQAHNVTNHCDD 225
++ V R V + +Q + TN C D
Sbjct: 633 TNPQVYYQASLRPYGVTVYHSLRQPY-ATNPCKD 665
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 25/276 (9%)
Query: 1 MASISSGNVTRVKREMNLKTVLS--NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL 58
+ +S + + K + + +L+ + + +A DW+ KNLYWTD+ +S I V L
Sbjct: 757 FSDMSKHMIFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKS---ISVMRL 813
Query: 59 EGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWP 118
+ +RT++ LN P + + P +G +F+T+ +I A DG + +++ + WP
Sbjct: 814 ADKTRRTVVQY-LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWP 872
Query: 119 TGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
G+ ID+ + RLYW D IE +G DR + H E + P+ L +F ++L+F+ +
Sbjct: 873 NGLAIDWAASRLYWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH-PFGLAIFGEHLFFTDW 931
Query: 179 RTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNV---TNHCDDKPCHQ----S 231
R I+++ K + V+ R+ IL N+ +N C ++P H S
Sbjct: 932 RLGAIIRVRKADGGEMTVI-----RSGIAYILHLKSYDVNIQTGSNAC-NQPTHPNGDCS 985
Query: 232 ALCINLPS-SHTCLCPDHLTEELNVTSGKMSCKVAP 266
C +P+ C CP + + S ++C+ P
Sbjct: 986 HFCFPVPNFQRVCGCP----YGMRLASNHLTCEGDP 1017
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 2 ASISSGN-VTRVKRE----MNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVS 56
+S++S N + R+K + MN+ T + RG+AVDWV NLY+T+A S I V
Sbjct: 2116 SSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAF-VSETLIEVL 2174
Query: 57 TLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQ 116
+ +R LL ++ P I ++P + +FW + G +P+I + +D N+ LV I
Sbjct: 2175 RINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLVSEGIV 2234
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ +D +YW D I I +NG++ V+ + PY + VFE+++ +
Sbjct: 2235 TPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVIRYGS-RYPTPYGITVFENSIIWV 2293
Query: 177 TYRTNNILKINKFGNSDF--NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ---- 230
I + +K + V+ +N+N DV I + Q + ++ PC +
Sbjct: 2294 DRNLKKIFQASKEPENTEPPTVIRDNINWLRDVTIFDKQVQPRSPA-EVNNNPCLENNGG 2352
Query: 231 -SALCINLPSSHTCLC 245
S LC LP HT C
Sbjct: 2353 CSHLCFALPGLHTPKC 2368
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 34/250 (13%)
Query: 15 EMNLKTVLSNLHDP----------RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR 64
+++ T+ S +H P G+A DW+ + +Y++D N ++ S E R
Sbjct: 2445 QISYATLSSGIHTPTVIASGIGTADGIAFDWITRRIYYSDY----LNQMINSMAEDGSNR 2500
Query: 65 TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITID 124
T++ + +P I L+P G ++W + +I A++ G + +V++++ P+G+T+D
Sbjct: 2501 TVI-ARVPKPRAIVLDPCQGYLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLD 2559
Query: 125 YPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNIL 184
Y LYW D + IE L G DR V+ + + L ++ +Y++ T I
Sbjct: 2560 YEEDLLYWVDASLQRIERSTLTGVDREVIVNA---AVHAFGLTLYGQYIYWTDLYTQRIY 2616
Query: 185 KINKFGNSDFNVLANNL---NRASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCIN 236
+ NK+ S + NL R + ++ + +Q +N PC Q S +C
Sbjct: 2617 RANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQCNN--------PCEQFNGGCSHICAP 2668
Query: 237 LPSSHTCLCP 246
P+ C CP
Sbjct: 2669 GPNGAECQCP 2678
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 21/246 (8%)
Query: 7 GNVTRVKREMNLKTVLSNLH---DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--R 61
G + RVK + +TV +++ +A+DW+ +NLY T+ +S I V TL G R
Sbjct: 1799 GEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQS---IEVLTLHGDIR 1855
Query: 62 KKRTLLNT-----GLNEPYDIALEPLSGRMFW----TELGIKPRISGASIDGKNKFNLVD 112
++TL+ G+ P I ++P G+++W T+ G+ +I+ A++DG + L
Sbjct: 1856 YRKTLIANDGTALGVGFPIGITVDPARGKLYWSDQGTDSGVPAKIASANMDGTSVKTLFT 1915
Query: 113 NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDN 172
N++ +T+D Q+LYWA IE N++G DR ++ H + P+ + V +
Sbjct: 1916 GNLEHLECVTLDIEEQKLYWAVTGRGVIERGNVDGTDRMILVHQLSH---PWGIAVHDSF 1972
Query: 173 LYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA 232
LY++ + I +++K ++ VL +N+ + + + A +N C +
Sbjct: 1973 LYYTDEQYEVIERVDKATGANKIVLRDNVPNLRGLQVYHR-RNAAESSNGCSNNMNACQQ 2031
Query: 233 LCINLP 238
+C+ +P
Sbjct: 2032 ICLPVP 2037
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 52 NIMVSTLEGRKKRTLL---NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKF 108
++++ + GR R L+ N G+ +A R+FWT+ ++ ++ I+G N
Sbjct: 403 DLLIGDIHGRSFRILVESQNRGV--AVGVAFHYHLQRVFWTDT-VQNKVFSVDINGLNIQ 459
Query: 109 NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY-KPYKLE 167
+++ +++ P + +D+ + ++Y + K I+ +NL+G R V TE+ G+ + ++
Sbjct: 460 EVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYR-VTLITENLGHPRGIAVD 518
Query: 168 VFEDNLYFSTYRT 180
L+FS + +
Sbjct: 519 PTVGYLFFSDWES 531
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 49 SSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE--PLSGRMFWTELGIKPRISGASIDGKN 106
+S N +++ + + + N Y +A++ +SGR+FW++ + + A +G +
Sbjct: 1441 ASQNKIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSD-ATQGKTWSAFQNGTD 1499
Query: 107 KFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVV 153
+ + D++I I ID+ + LYW D TIE ++G R V+
Sbjct: 1500 RRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVL 1546
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 106 NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYK 165
N ++LV+N + + D S R++W+D S NG DR VV+ + +
Sbjct: 1457 NIYSLVENG-SYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRVVFDSSIILTETIA 1515
Query: 166 LEVFEDNLYFSTYRTNNILKINKFGNSDFNVL 197
++ NLY++ Y I +++K S VL
Sbjct: 1516 IDWVGRNLYWTDYALETI-EVSKIDGSHRTVL 1546
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 636 CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKKQSYVNSHISSILILILL 695
C +GG C Y + DL P C CP GY G C+ SK S + + ++L+ ILL
Sbjct: 4383 CMHGGNC----YFDETDL-PKCKCPSGYTGKYCEMA---FSKGISPGTTAV-AVLLTILL 4433
Query: 696 LITVGGI---GYYIFR 708
++ +G + G++ +R
Sbjct: 4434 IVVIGALAIAGFFHYR 4449
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 454 CKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTC 513
CK C + C + G C C G S + T C P + P C C
Sbjct: 4334 CKQICSH-LCLLRPGGYSCACPQGSSFIEGSTTECDAAIELPINLPPP---------CRC 4383
Query: 514 LNGGTCIPNSKN-NVCKCPSQYTGRRCECAV 543
++GG C + + CKCPS YTG+ CE A
Sbjct: 4384 MHGGNCYFDETDLPKCKCPSGYTGKYCEMAF 4414
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 135/238 (56%), Gaps = 12/238 (5%)
Query: 13 KREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN 72
K E V+S L P G+A DW+G+ LYWTD+ +N I VS L+G ++ L L+
Sbjct: 82 KTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSLRKVLFWQELD 138
Query: 73 EPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW 132
+P IAL+P SG M+WT+ G P+I A +DG ++F ++++ I WP G+T+DY Q+LYW
Sbjct: 139 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 198
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
AD K I NL+G +R V + + P+ L +FED LY++ + T++IL NK+
Sbjct: 199 ADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 256
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHC--DDKPCHQSALCINLPSS--HTCLCP 246
+ +++ D+ + +Q N TN C D+ C S LC+ P + C CP
Sbjct: 257 GLREIHSDIFSPMDIHAFSQQRQP-NATNPCGIDNGGC--SHLCLMSPVKPFYQCACP 311
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 125/222 (56%), Gaps = 10/222 (4%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P G+AVDW+GKNLYW D G +N I VS L+G+ ++ L+ L+ P +AL+P G M+
Sbjct: 707 PEGMAVDWLGKNLYWADTG---TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMY 763
Query: 88 WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147
WTE G KP+I A++DG + LV N+ G+TIDY +RLYW D IES N+ G
Sbjct: 764 WTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 822
Query: 148 KDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDV 207
+R V+ D+ P+ L ++D +Y++ + +I + NK + ++ +L+ D+
Sbjct: 823 LNREVI---ADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDI 879
Query: 208 LILQENKQAHNVTNHCDDKPCHQSALCINLP-SSHTCLCPDH 248
L+ ++Q+ N C H S LC+ +P C CP H
Sbjct: 880 LVFHSSRQSG--WNECASSNGHCSHLCLAVPVGGFVCGCPAH 919
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
V + + P G+AVDWV +NLYWTD G ++ I V+ L G ++ L++ L EP I L
Sbjct: 397 VVTAQIAHPDGIAVDWVARNLYWTDTG---TDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P+ G M+WT+ G P+I A++DG ++ LV+ ++ WP G+ +DY ++YW D K
Sbjct: 454 DPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK 513
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
IE +N +G R V+ ED + + D +Y++ ++ +I +++K +++ V+ +
Sbjct: 514 IEVMNTDGTGRRVL--VEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHK-RSAEREVIID 570
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCINLPSSHTCLCP 246
L D++ L +A NV PC + S LC+ P C CP
Sbjct: 571 QL---PDLMGL----KATNVHRVIGSNPCAEENGGCSHLCLYRPQGLRCACP 615
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 48/293 (16%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P +++D + +YWT ++N I V+ L+GR +L + P + + P G M+
Sbjct: 1016 PYDLSIDIYSRYIYWT---CEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMY 1072
Query: 88 WTELGIK-PRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146
+T L + P+I A++DG + L + + P + +D +L+WAD R IES +L+
Sbjct: 1073 FTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS 1132
Query: 147 GKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASD 206
G +R V+ + N +P L VFE+ LY+ + I KI+ G + + + SD
Sbjct: 1133 GANRIVL--EDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSD 1190
Query: 207 V-----LILQENKQAHNVTNHCDDKPCHQ-----SALCINLPSSHT-CLCPDHLTEELNV 255
+ L LQE +Q PC Q S +C+ T C CP HL +
Sbjct: 1191 IHAVKELNLQEYRQ----------HPCAQDNGGCSHICLVKGDGTTRCSCPMHLV----L 1236
Query: 256 TSGKMSCKVAPA-----RTCY---LDCNHGNLPSSHTC----LCPDHLTEELN 296
++SC P TC+ +DC +P + C C DH ++ELN
Sbjct: 1237 LQDELSCGEPPTCSPQQFTCFTGEIDC----IPVAWRCDGFTECEDH-SDELN 1284
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
VTR+ M + +L +PR + +D + +YWTD G I + L+G + L+
Sbjct: 428 EVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWG--EIPKIERAALDGSDRVVLV 485
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI--DY 125
NT L P +AL+ G+++W + +I + DG + LV++ I G T+ DY
Sbjct: 486 NTSLGWPNGLALDYDEGKIYWGDAKTD-KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDY 544
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVV 153
+YW D + R+IE ++ +R V+
Sbjct: 545 ----VYWTDWQRRSIERVHKRSAEREVI 568
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
TG+ E + + R++WT++ +K IS A ++G ++V+ + +P G+ +D+ +
Sbjct: 659 TGVKEASALDFDVTDNRIYWTDISLK-TISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 717
Query: 129 RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
LYWAD IE L+G+ R V+ + + + L+ E +Y++ + +
Sbjct: 718 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 777
Query: 189 FGNSDFNVLANNLNRASDVLI 209
S+ L N+ RA+ + I
Sbjct: 778 MDGSERTTLVPNVGRANGLTI 798
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
I +P+ G ++WT+ ++ I + IDG +V I P GI +D+ ++ LYW D
Sbjct: 365 IDYDPVEGYIYWTDDEVRA-IRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTG 423
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
IE LNG R ++ + + L+ +Y++ + ++ SD V
Sbjct: 424 TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV 483
Query: 197 LAN 199
L N
Sbjct: 484 LVN 486
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
V+++ + V +L PR +A+D +YWT+ GG+ I + ++G +RT L
Sbjct: 730 EVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKP--KIDRAAMDG-SERTTL 786
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT--IDY 125
+ + ++ R++WT+L I +++ G N+ ++ +++ P G+T DY
Sbjct: 787 VPNVGRANGLTIDYAKRRLYWTDLDTN-LIESSNMLGLNR-EVIADDLPHPFGLTQYQDY 844
Query: 126 PSQRLYWADPKARTIESIN-LNGKDRFVVYHTEDNGYKPYKLEVF 169
+YW D R+IE N +G++R ++ G+ Y +++
Sbjct: 845 ----IYWTDWSRRSIERANKTSGQNRTII-----QGHLDYVMDIL 880
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
T++ N+ G+ +D+ + LYWTD +N I S + G + + + + P+ L
Sbjct: 785 TLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLNREVIAD---DLPHPFGL 838
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYW 132
++WT+ + G+N+ ++ ++ + I + + S++ W
Sbjct: 839 TQYQDYIYWTDWSRRSIERANKTSGQNR-TIIQGHLDYVMDILVFHSSRQSGW 890
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 133/256 (51%), Gaps = 14/256 (5%)
Query: 4 ISSGNVTRVKREMNLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK 62
I S ++ + + +TV+SN + P G+AVDW+ N+YWTD+ + I V+ EG K
Sbjct: 449 IYSASMDKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDS---KFSTISVANTEGSK 505
Query: 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT 122
++TL L +P DI ++P G M+WT+ G+ +I ++G +++ LV +NI+WP GIT
Sbjct: 506 RKTLFTDDLAKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGIT 565
Query: 123 IDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
+D SQRLYW D K ++ I++ G++R V E + P+ L +FED ++++
Sbjct: 566 LDLISQRLYWVDSKLHSLSCIDITGENRRTVLSDETHLAHPFGLTIFEDLVFWTDIENEA 625
Query: 183 ILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLPS 239
I + + +A +L D+ +L N + N C+ LC+ P
Sbjct: 626 IFSAKRLTGENIMKVAEHLLSPEDI-VLYHNLRQPKAENWCESHHLGNGGCGYLCLPAPH 684
Query: 240 ------SHTCLCPDHL 249
TC CPD +
Sbjct: 685 VNARSPKFTCACPDGM 700
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 13/237 (5%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
+ S+L P G+AVDW+ ++YWTD+ + V+ G +++TL ++P I +
Sbjct: 455 VISSDLQAPDGLAVDWIHGHIYWTDS---VLGTVSVADTRGFRRKTLFRQEGSKPRAIVV 511
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P G M+WT+ G+ +I ++G + ++LV +IQWP GIT+D S RLYW D K +
Sbjct: 512 DPAHGFMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 571
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
I SI++NG +R V E P+ L +FED ++++ I N+ SD +++A
Sbjct: 572 ISSIDVNGGNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDVHLVAE 631
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLPS--SH----TCLCPD 247
NL D+++ Q V N C+ LC+ P SH TC CPD
Sbjct: 632 NLLSPEDIVLFHNLTQPRGV-NWCEKTALPNGGCQYLCLPAPQINSHSPKFTCACPD 687
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKF----NLVDNNIQ 116
R + T L L + E S R++W++L + +I A IDG + F ++ +++Q
Sbjct: 403 RSEYTSLIANLKNVVALDAEVASNRIYWSDLSQR-KIYSAQIDGAHGFPAYDTVISSDLQ 461
Query: 117 WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176
P G+ +D+ +YW D T+ + G R ++ E G KP + V + +
Sbjct: 462 APDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQE--GSKPRAIVVDPAHGFMY 519
Query: 177 TYRTNNILKINKFGNSDFNVLA 198
KI K G + +V +
Sbjct: 520 WTDWGVPAKIEKGGLNGVDVYS 541
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 14/256 (5%)
Query: 4 ISSGNVTRVKREMNLKTVL-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK 62
I S + R + T++ +L P G+AVDW+ N+YWTD+ + V+ +G K
Sbjct: 422 IYSTQIDRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDS---ILGTVSVADTKGVK 478
Query: 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT 122
++TL ++P I ++P+ G M+WT+ G +I ++G + ++LV +IQWP GIT
Sbjct: 479 RKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGIT 538
Query: 123 IDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
+D RLYW D K +I SI++NG +R V + P+ L +FED ++++
Sbjct: 539 LDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDIINEA 598
Query: 183 ILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA---LCINLPS 239
I N+ SD +++A NL D+++ Q V N C+ LC+ P
Sbjct: 599 IFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGV-NWCERTALQNGGCQYLCLPAPQ 657
Query: 240 ------SHTCLCPDHL 249
TC CPD +
Sbjct: 658 INPRSPKFTCACPDGM 673
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 138/261 (52%), Gaps = 14/261 (5%)
Query: 4 ISSGNVTRVKREMNLKTVLSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK 62
I S ++ + + +TV+SN + P G+AVDW+ N+YWTD+ + I V+ EG K
Sbjct: 449 IYSASMEKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDS---KFSTISVANTEGSK 505
Query: 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGIT 122
+RT + L +P DI ++P G M+WT+ G+ +I ++G +++ LV NI+WP GIT
Sbjct: 506 RRTPPSDDLEKPRDIVVDPSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGIT 565
Query: 123 IDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
+D +QRLYW D K ++ I++ G++R V E + P+ L +FED ++++
Sbjct: 566 LDLINQRLYWVDSKLHSLSCIDVTGENRRTVISDETHLAHPFGLTIFEDLVFWTDIENEA 625
Query: 183 ILKINKFGNSDFNVLANNLNRASDVLILQENKQ--------AHNVTNHCDDKPCHQSALC 234
I N+ + +A +L D+++ +Q AH++ N + C +
Sbjct: 626 IFSANRLTGRNIMKVAEDLLSPEDIVLYHNLRQPKAENWCEAHHLGNGGCEYLCLPAPHI 685
Query: 235 INLPSSHTCLCPD--HLTEEL 253
TC CPD HL +++
Sbjct: 686 TARSPKFTCACPDGMHLGDDM 706
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 124/229 (54%), Gaps = 8/229 (3%)
Query: 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79
V+S L P G+A DWVGK LYWTD+ +N I V+ L G ++ L L++P IAL
Sbjct: 102 VVISGLVSPDGLACDWVGKKLYWTDS---ETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 158
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P G M+WT+ G PRI A +DG + +VD++I WP G+TID Q+LYWAD K
Sbjct: 159 DPAHGYMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSF 218
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
I NL+G R V E + P+ L + D LY++ ++T +I NK + +
Sbjct: 219 IHRANLDGSFRQKV--VEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKRTGGKRKEILS 276
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSS--HTCLCP 246
L D+ +L + +Q T C++ S LC+ PS +TC CP
Sbjct: 277 ALYSPMDIQVLSQERQPFFHT-RCEEDNGGCSHLCLLSPSEPFYTCACP 324
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 9/223 (4%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P G+AVDW+GKNLYW D G +N I V+ L+G+ ++ L+ L+ P +AL+P G ++
Sbjct: 720 PEGMAVDWMGKNLYWADTG---TNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIY 776
Query: 88 WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147
WTE G KPRI A +DG N LVD + +TIDY QRLYW D IES N+ G
Sbjct: 777 WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNMLG 835
Query: 148 KDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDV 207
++R V+ D+ P+ L + D +Y++ + ++I + +K + ++ +L+ D+
Sbjct: 836 QERVVI---ADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDI 892
Query: 208 LILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLT 250
L+ ++Q + N C LC+ +P H C C H T
Sbjct: 893 LVFHSSRQ--DGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYT 933
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 128/227 (56%), Gaps = 10/227 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
V + ++DP G+AVDWV +NLYWTD G ++ I V+ L G ++ L++ L+EP IAL
Sbjct: 411 VNTEINDPDGIAVDWVARNLYWTDTG---TDRIEVTRLNGTSRKILVSEDLDEPRAIALH 467
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P+ G M+WT+ G P+I A++DG+ + LV+ ++ WP G+ +D +LYW D K I
Sbjct: 468 PVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKI 527
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E IN++G R + ED + + D +Y++ ++ +I +++K S +V+ +
Sbjct: 528 EVINVDGTKRRTLL--EDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASR-DVIIDQ 584
Query: 201 LNRASDVLILQENKQAHNV-TNHCDDKPCHQSALCINLPSSHTCLCP 246
L D++ L+ A V TN C D+ S LC P + C CP
Sbjct: 585 L---PDLMGLKAVNVAKVVGTNPCADRNGGCSHLCFFTPHATRCGCP 628
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 8 NVTRVKREMNLKTVLSNL-------HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
N+ R K + VL++L P +++D + L+WT ++N I V L G
Sbjct: 999 NIKRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIYSRTLFWT---CEATNTINVHRLSG 1055
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKP-RISGASIDGKNKFNLVDNNIQWPT 119
+L ++P I + G +++T + + +I A++DG + L + P
Sbjct: 1056 EAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQDRAAKIERAALDGTEREVLFTTGLIRPV 1115
Query: 120 GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR 179
+ +D +L+W D + IES +L+G +R + + N +P L + +LY+ +
Sbjct: 1116 ALVVDNTLGKLFWVDADLKRIESCDLSGANRLTL--EDANIVQPLGLTILGKHLYWIDRQ 1173
Query: 180 TNNILKINK 188
I ++ K
Sbjct: 1174 QQMIERVEK 1182
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
VTR+ V +L +PR +A+ V +YWTD G + I + L+G+++R L+
Sbjct: 441 EVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWG--ENPKIECANLDGQERRVLV 498
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI--DY 125
N L P +AL+ G+++W + +I ++DG + L+++ + G T+ D+
Sbjct: 499 NASLGWPNGLALDLQEGKLYWGDAKTD-KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDF 557
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVV 153
+YW D + R+IE ++ R V+
Sbjct: 558 ----IYWTDWQRRSIERVHKVKASRDVI 581
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
I +PL G ++WT+ ++ I A +DG LV+ I P GI +D+ ++ LYW D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA-IRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTG 436
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
IE LNG R ++ + + + L +Y++ + N ++ + V
Sbjct: 437 TDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQERRV 496
Query: 197 LAN 199
L N
Sbjct: 497 LVN 499
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
TG+ E + + + ++WT++ +K IS A ++G + ++V+ + +P G+ +D+ +
Sbjct: 672 TGVKEASALDFDVSNNHIYWTDVSLK-TISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGK 730
Query: 129 RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
LYWAD IE L+G+ R V+ + + + L+ + +Y++ + +
Sbjct: 731 NLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVRAF 790
Query: 189 FGNSDFNVLANNLNRASDVLI 209
++ L + + RA+D+ I
Sbjct: 791 MDGTNCMTLVDKVGRANDLTI 811
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
V R+ + V +L +PR +A+D +YWT+ GG+ I+ + ++G TL+
Sbjct: 743 EVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKP--RIVRAFMDGTNCMTLV 800
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ + D+ ++ R++WT+L I +++ G+ + + D ++ P G+T S
Sbjct: 801 DK-VGRANDLTIDYADQRLYWTDLDTN-MIESSNMLGQERVVIAD-DLPHPFGLT--QYS 855
Query: 128 QRLYWADPKARTIESIN-LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
+YW D +IE + +G++R ++ G+ L+ D L F + R + +
Sbjct: 856 DYIYWTDWNLHSIERADKTSGRNRTLI-----QGH----LDFVMDILVFHSSRQDGL 903
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTEL---GIKPRI---SGASIDGKNKFNLVDNN 114
+ + T++ +GL + + + G ++WT++ IK +GA++ N+V +
Sbjct: 52 KLESTIVVSGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAVQ-----NVVISG 106
Query: 115 IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLY 174
+ P G+ D+ ++LYW D + IE NLNG R V++ + + + L+ +Y
Sbjct: 107 LVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY 166
Query: 175 FSTY 178
++ +
Sbjct: 167 WTDW 170
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 9/223 (4%)
Query: 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87
P G+AVDW+GKNLYW D G +N I V+ L+G+ ++ L+ L+ P +AL+P G ++
Sbjct: 719 PEGMAVDWMGKNLYWADTG---TNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIY 775
Query: 88 WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147
WTE G KPRI A +DG N LVD + +TIDY QRLYW D IES N+ G
Sbjct: 776 WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNMLG 834
Query: 148 KDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDV 207
++R V+ D+ P+ L + D +Y++ + ++I + +K + ++ +L+ D+
Sbjct: 835 QERMVI---ADDLPYPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDI 891
Query: 208 LILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLT 250
L+ ++Q + N C LC+ +P H C C H T
Sbjct: 892 LVFHSSRQ--DGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYT 932
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 124/233 (53%), Gaps = 18/233 (7%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
V+S L P G+A DWVGK LYWTD+ +N I V+ L G ++ L L++P IAL+
Sbjct: 102 VISGLVSPDGLACDWVGKKLYWTDS---ETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 158
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P G M+WT+ G PRI A +DG + +VD++I WP G+TID Q+LYWAD K I
Sbjct: 159 PAHGYMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFI 218
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
NL+G R V E + P+ L + D LY++ ++T +I NK+ + +
Sbjct: 219 HRANLDGSFRQKV--VEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQRKEILSA 276
Query: 201 LNRASDVLILQENKQAHNVTNHCDDKPCHQ-----SALCINLPSS--HTCLCP 246
L D+ +L + +Q T PC + S LC+ P ++C CP
Sbjct: 277 LYSPMDIQVLSQERQPPFHT------PCEEDNGGCSHLCLLSPREPFYSCACP 323
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 10/227 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
V + ++DP G+AVDWV +NLYWTD G ++ I V+ L G ++ L++ L+EP I L
Sbjct: 410 VNTEINDPDGIAVDWVARNLYWTDTG---TDRIEVTRLNGTSRKILVSEDLDEPRAIVLH 466
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P+ G M+WT+ G P+I A++DG+++ LV+ ++ WP G+ +D +LYW D K I
Sbjct: 467 PVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKI 526
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
E IN++G R + ED + + D +Y++ ++ +I +++K S +V+ +
Sbjct: 527 EVINIDGTKRKTLL--EDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASR-DVIIDQ 583
Query: 201 LNRASDVLILQENKQAHNV-TNHCDDKPCHQSALCINLPSSHTCLCP 246
L D++ L+ A V TN C D S LC P + C CP
Sbjct: 584 L---PDLMGLKAVNVAKVVGTNPCADGNGGCSHLCFFTPRATKCGCP 627
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 22 LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81
LS P +++D + L+WT ++N I V L+G +L ++P IA+
Sbjct: 1019 LSPDRQPHDLSIDIYSRTLFWT---CEATNTINVHRLDGDAMGVVLRGDRDKPRAIAVNA 1075
Query: 82 LSGRMFWTEL-GIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
G M++T + +I AS+DG + L + P + +D +L+W D + I
Sbjct: 1076 ERGYMYFTNMQDHAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRI 1135
Query: 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
ES +L+G +R + + N +P L V +LY+ + I ++ K
Sbjct: 1136 ESCDLSGANRLTL--EDANIVQPVGLTVLGRHLYWIDRQQQMIERVEK 1181
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
VTR+ V +L +PR + + V +YWTD G + I + L+GR + L+
Sbjct: 440 EVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWG--ENPKIECANLDGRDRHVLV 497
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI--DY 125
NT L P +AL+ G+++W + +I +IDG + L+++ + G T+ D+
Sbjct: 498 NTSLGWPNGLALDLQEGKLYWGDAKTD-KIEVINIDGTKRKTLLEDKLPHIFGFTLLGDF 556
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVV 153
+YW D + R+IE ++ R V+
Sbjct: 557 ----IYWTDWQRRSIERVHKVKASRDVI 580
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
I +PL G ++WT+ ++ I A +DG LV+ I P GI +D+ ++ LYW D
Sbjct: 377 IDYDPLEGYVYWTDDEVRA-IRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTG 435
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
IE LNG R ++ + + + L +Y++ + N ++ D +V
Sbjct: 436 TDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHV 495
Query: 197 LAN 199
L N
Sbjct: 496 LVN 498
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQ 128
TG+ E + + + ++WT++ +K IS A ++G + ++++ + +P G+ +D+ +
Sbjct: 671 TGVKEASALDFDVSNNHIYWTDVSLK-TISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGK 729
Query: 129 RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
LYWAD IE L+G+ R V+ + + + L+ + +Y++ + +
Sbjct: 730 NLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVRAF 789
Query: 189 FGNSDFNVLANNLNRASDVLI 209
++ L + + RA+D+ I
Sbjct: 790 MDGTNCMTLVDKVGRANDLTI 810
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
V R+ + V +L +PR +A+D +YWT+ GG+ I+ + ++G TL+
Sbjct: 742 EVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKP--RIVRAFMDGTNCMTLV 799
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ + D+ ++ R++WT+L I +++ G+ + + D ++ +P G+T S
Sbjct: 800 DK-VGRANDLTIDYADQRLYWTDLDTN-MIESSNMLGQERMVIAD-DLPYPFGLT--QYS 854
Query: 128 QRLYWADPKARTIESIN-LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
+YW D +IE + +G++R ++ G+ L+ D L F + R + +
Sbjct: 855 DYIYWTDWNLHSIERADKTSGRNRTLI-----QGH----LDFVMDILVFHSSRQDGL 902
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKP-RISGASIDGKNKFNLVDNNIQWPT 119
+ + T++ +GL + + + G ++WT++ + + + + G N+V + + P
Sbjct: 51 KLESTIVASGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPD 110
Query: 120 GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178
G+ D+ ++LYW D + IE NLNG R V++ + + + L+ +Y++ +
Sbjct: 111 GLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDW 169
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 10/239 (4%)
Query: 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYD 76
N V + L G+ VDW+ KN+Y+ D I V T +G T+L ++P
Sbjct: 354 NEVIVTTGLALITGIDVDWITKNIYFADEDNHC---IGVCTNDG-TYCTVLIKDTDKPTG 409
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+AL P G+M+W++ G P I+ A +DGKN V+ ++WP +TIDYP++RLYW D K
Sbjct: 410 VALLPTQGKMYWSDWGTFPHIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAK 469
Query: 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196
++ IES+ L+G DR +V H D +P+ + VF++ LY+S + +N I NKF D+ +
Sbjct: 470 SKMIESVRLDGTDRRIVLH--DIIQEPFSMTVFQNKLYWSDWESNGIQTCNKFTGKDWKI 527
Query: 197 LANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNV 255
L N N+ V + + N+ N C PC Q + +N +TC C L ++LN
Sbjct: 528 LIRNHNKPYSVH-MDHSAIKPNIDNPCYSNPCSQLCM-LNQNKGYTCGCT--LDKKLNA 582
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 7 GNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL 66
G + ++ N + + P+ +AVDW+ N+Y D N I V LE K TL
Sbjct: 1395 GTIKKLNIRTNEIVTVKIVEHPQALAVDWITGNVYVND--NSHLNTIKVCNLEKGKCATL 1452
Query: 67 LNTGLN-EPYDIALEPLSGRMFWTELGIKP-----RISGASIDGKNKFNLVDNNIQWPTG 120
+ + + ++ ++ +FW E+ ++ +I + G + ++ +++ + G
Sbjct: 1453 VKIQDKMKVASVIVDSINRWLFWAEISLEADHPTSKICRTDMTGAD-MKIIASDLGFVRG 1511
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
+TID+ +LYW+D +T+ES N +G R VV N + +FE +LYF + +
Sbjct: 1512 MTIDHVKSKLYWSDDFYKTVESSNFDGSQRKVVLTL--NMNHALSISIFEQSLYFLS--S 1567
Query: 181 NNILK----INKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCIN 236
+N+L K N+ ANN+ R +L + N CD + C +C+
Sbjct: 1568 DNLLSSCKMYGKRSCEHVNIGANNVFRLFSILHISRQVP---FANPCDAEYC--DYMCVL 1622
Query: 237 LPSSHTCLCPDHLTEELNVT 256
+ TC+C D + E N T
Sbjct: 1623 KKENATCICSDGESIESNST 1642
Score = 39.7 bits (91), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 37/241 (15%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTE 90
+A D++G NLY T+ +S I ++T K T P IAL P +MF
Sbjct: 686 LAFDYIGNNLYTTNTVNQSIEVINLNT----KAMTAFYFKDEVPKYIALAPEESKMFVAF 741
Query: 91 LGIKPRISGASI-----DGKNKFNLVDNNIQWPT-GITIDYPSQRLYWADPKARTIESIN 144
ISG ++ +G K L+ + P + D S+ L+ +D I S
Sbjct: 742 QKSMHSISGLTLYEMQMNGLGKRKLIREGLIGPQLPMYYDRDSKTLFVSDLLPGYIYS-- 799
Query: 145 LNGKDRFVVYHTEDNGYK-PYKLEVFEDNLYF---------STYRTNNILKINKFGNSDF 194
+ +D ++ +G K P+ L V DNL++ + +RT ++ + K D
Sbjct: 800 HSAQDTRILR----SGLKSPHSLTVAGDNLFWIESQNKLYSTNFRTASVKQ--KTVEFDL 853
Query: 195 NVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQ--------SALCI-NLPSSHTCLC 245
+ L +N+ L + VT DD P H S +C+ +L +S C C
Sbjct: 854 SKLNDNMTSLPGHLTPYSRDAQYVVTLRKDDIPKHDCQKNNGNCSHVCLPSLITSFICAC 913
Query: 246 P 246
P
Sbjct: 914 P 914
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 121/211 (57%), Gaps = 8/211 (3%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
+ I N+ +RE + + + P G+AVDW+G+ YWTD R + I S L G
Sbjct: 533 LKWIERANMDGSQRE---RLIEEGVDVPEGLAVDWIGRRFYWTD---RGKSLIGRSDLNG 586
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
++ + + +++P IA+ P++ R+FWT+ GI PRI +S+ G + + +++ WP+G
Sbjct: 587 KRSKIITKENISQPRGIAVHPMAKRLFWTDTGINPRIESSSLQGLGRLVIASSDLIWPSG 646
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
ITID+ + +LYW D K IE NL+G R + T+++ P+ + VFED ++FS +
Sbjct: 647 ITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRL--TQNDVGHPFAVAVFEDYVWFSDWAM 704
Query: 181 NNILKINKFGNSDFNVLANNLNRASDVLILQ 211
+++++NK D L ++ + S ++++
Sbjct: 705 PSVMRVNKRTGKDRVRLQGSMLKPSSLVVVH 735
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
N +R +R N++ +S G+A++W+ + + W++ + I V+ ++G LL
Sbjct: 104 NGSRQERVCNIEKNVS------GMAINWINEEVIWSN---QQEGIITVTDMKGNNSHILL 154
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ L P ++A++P+ +FW+ + + A +DG L++ + + T +++D
Sbjct: 155 -SALKYPANVAVDPVERFIFWSS-EVAGSLYRADLDGVGVKALLETSEK-ITAVSLDVLD 211
Query: 128 QRLYWADPKARTIESI----NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
+RL+W S+ + +G + H + + + +F D +++ST++ I
Sbjct: 212 KRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQHNL--FAMSLFGDRIFYSTWKMKTI 269
Query: 184 LKINKFGNSDFNVLANNLNRASDVLILQENKQAHNV--------TNHCDDKPCH------ 229
NK D +N S + L E K H + T + K C
Sbjct: 270 WIANKHTGKDM----VRINLHSSFVPLGELKVVHPLAQPKAEDDTWEPEQKLCKLRKGNC 325
Query: 230 QSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG------NLPSSH 283
S +C SH C+C E ++ + C+ C NHG N P S+
Sbjct: 326 SSTVCGQDLQSHLCMC----AEGYALSRDRKYCE--DVNECAF-WNHGCTLGCKNTPGSY 378
Query: 284 TCLCP 288
C CP
Sbjct: 379 YCTCP 383
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 50 SNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN 109
S +I +G TLL+ + Y + +P+ ++++ +K I A++DG +
Sbjct: 490 SQDIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRER 548
Query: 110 LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEV 168
L++ + P G+ +D+ +R YW D I +LNGK ++ T++N +P + V
Sbjct: 549 LIEEGVDVPEGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKII--TKENISQPRGIAV 605
>sp|P22105|TENX_HUMAN Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=3
Length = 4289
Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats.
Identities = 114/370 (30%), Positives = 149/370 (40%), Gaps = 73/370 (19%)
Query: 310 RTCYLDCNH-GTCEFDDDFDPHCICQENFYGTYCEKVNNSMCP--CLNQGMCYPDLTHPE 366
R+C C+ G CE + C+C + G C CP C +G C
Sbjct: 278 RSCPRGCSQRGRCE-----NGRCVCNPGYTGEDC---GVRSCPRGCSQRGRCKDG----- 324
Query: 367 PTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDTCQ-QCLNLKCQN 425
+C C P YTG C +R C C GG C+ CVC PG+TG+ C + C+
Sbjct: 325 ---RCVCDPGYTGEDCGTRSCPWDCGEGGRCV--DGRCVCWPGYTGEDCSTRTCPRDCRG 379
Query: 426 GGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYC-VNGECSITDSGPKCMCSPGYSGKKCD 484
G C + EC C Y G +C C C G C +C+C PGY+G C
Sbjct: 380 RGRCEDG----ECICDTGYSGDDCGVRSCPGDCNQRGRC----EDGRCVCWPGYTGTDCG 431
Query: 485 TCTCLNGDSGPK------CMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRR 538
+ C G C+C+ GYSG+ C +C ++ C C YTGR
Sbjct: 432 SRACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRD 491
Query: 539 CECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNY 598
C G +C P C G CV +G+ C C P ++G+ C R C
Sbjct: 492 C----GTRAC--------PGDCRGRGRCV--DGR--CVCNPGFTGEDCGSRR----CPGD 531
Query: 599 CDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICI 658
C GLC VC C G+SG CS R SC G CR + LD C+
Sbjct: 532 CRGHGLCE-----DGVCVCDAGYSGEDCSTR-SCP------GGCRGRGQCLDGR----CV 575
Query: 659 CPRGYAGVRC 668
C GY+G C
Sbjct: 576 CEDGYSGEDC 585
Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats.
Identities = 128/457 (28%), Positives = 174/457 (38%), Gaps = 105/457 (22%)
Query: 228 CHQSALCINLPSSHTCLC-PDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCL 286
C Q C N C+C P + E+ V R+C C+ C+
Sbjct: 284 CSQRGRCEN----GRCVCNPGYTGEDCGV------------RSCPRGCSQRGRCKDGRCV 327
Query: 287 CPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG-TCEFDDDFDPHCICQENFYGTYCEKV 345
C T E C R+C DC G C D C+C + G C
Sbjct: 328 CDPGYTGE--------DCGT---RSCPWDCGEGGRC-----VDGRCVCWPGYTGEDC--- 368
Query: 346 NNSMCP--CLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQT 403
+ CP C +G C +C C Y+G C R C C+ G C
Sbjct: 369 STRTCPRDCRGRGRCEDG--------ECICDTGYSGDDCGVRSCPGDCNQRGRC--EDGR 418
Query: 404 CVCPPGFTGDTC-QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN-G 461
CVC PG+TG C + C+ G C N C C Y G++C C C G
Sbjct: 419 CVCWPGYTGTDCGSRACPRDCRGRGRCENGV----CVCNAGYSGEDCGVRSCPGDCRGRG 474
Query: 462 ECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGP------KCMCSPGYSGKKCDTCTCLN 515
C +SG +CMC PGY+G+ C T C G +C+C+PG++G+ C + C
Sbjct: 475 RC---ESG-RCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRC-- 528
Query: 516 GGTCIPNS--KNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKP 573
G C + ++ VC C + Y+G C + + P C G C ++G+
Sbjct: 529 PGDCRGHGLCEDGVCVCDAGYSGEDC------------STRSCPGGCRGRGQC--LDGR- 573
Query: 574 SCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCA 633
C C YSG+ C R+ C N C G+C VC C G+ CS R +C
Sbjct: 574 -CVCEDGYSGEDCGVRQ----CPNDCSQHGVCQ-----DGVCICWEGYVSEDCSIR-TCP 622
Query: 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670
C G C E C+C GY G C T
Sbjct: 623 SNCHGRGRCEEGR----------CLCDPGYTGPTCAT 649
Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats.
Identities = 134/491 (27%), Positives = 179/491 (36%), Gaps = 123/491 (25%)
Query: 245 CPDHLTEELNVTSGKMSC------KVAPARTCYLDCNHGNLPSSHTCLC-PDHLTEELNV 297
CP ++ G+ C + R+C DC G C+C P + E+ +
Sbjct: 311 CPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCST 370
Query: 298 TSGKMSCKVAPARTCYLDC-NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCP--CLN 354
RTC DC G CE D CIC + G C CP C
Sbjct: 371 ------------RTCPRDCRGRGRCE-----DGECICDTGYSGDDC---GVRSCPGDCNQ 410
Query: 355 QGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDT 414
+G C +C C P YTG C SR C C G C CVC G++G+
Sbjct: 411 RGRCEDG--------RCVCWPGYTGTDCGSRACPRDCRGRGRC--ENGVCVCNAGYSGED 460
Query: 415 C--QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQC------KNYCVNGECSIT 466
C + C C+ G C + C C Y G++C C + CV+G C
Sbjct: 461 CGVRSCPG-DCRGRGRCESG----RCMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCN 515
Query: 467 ------DSGPK----------------CMCSPGYSGKKCDTCTCLNGDSGP------KCM 498
D G + C+C GYSG+ C T +C G G +C+
Sbjct: 516 PGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCV 575
Query: 499 CSPGYSGKKCDTCTCLN---------GGTCI-----PNSKNNVCKCPSQYTGR------R 538
C GYSG+ C C N G CI + ++ CPS GR R
Sbjct: 576 CEDGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHGRGRCEEGR 635
Query: 539 CECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPS-CHN 597
C C G T + A + P C G CV + C C Y G+ C + E S C
Sbjct: 636 CLCDPGYTG-PTCATRMCPADCRGRGRCV----QGVCLCHVGYGGEDCGQEEPPASACPG 690
Query: 598 YCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPIC 657
C LC + C CV G+ G C+ + +C C G C + + C
Sbjct: 691 GCGPRELCRAGQ-----CVCVEGFRGPDCAIQ-TCPGDCRGRGECHDGS----------C 734
Query: 658 ICPRGYAGVRC 668
+C GYAG C
Sbjct: 735 VCKDGYAGEDC 745
Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats.
Identities = 109/373 (29%), Positives = 141/373 (37%), Gaps = 75/373 (20%)
Query: 310 RTCYLDCNH-GTCEFDDDFDPHCICQENFYGTYCEKVNNSMCP--CLNQGMCYPDLTHPE 366
R+C C+ G CE C+C + G C CP C +G C
Sbjct: 247 RSCPRGCSQRGRCE-----GGRCVCDPGYTGDDC---GMRSCPRGCSQRGRC-------- 290
Query: 367 PTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDTC-QQCLNLKCQN 425
+C C P YTG C R C C G C CVC PG+TG+ C + C
Sbjct: 291 ENGRCVCNPGYTGEDCGVRSCPRGCSQRGRC--KDGRCVCDPGYTGEDCGTRSCPWDCGE 348
Query: 426 GGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN-GECSITDSGPKCMCSPGYSGKKCD 484
GG CV+ C C Y G++C C C G C +C+C GYSG C
Sbjct: 349 GGRCVDG----RCVCWPGYTGEDCSTRTCPRDCRGRGRCE----DGECICDTGYSGDDCG 400
Query: 485 TCTCLNGDSGPK-------CMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGR 537
+C GD + C+C PGY+G C + C +N VC C + Y+G
Sbjct: 401 VRSC-PGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGYSGE 459
Query: 538 RCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHN 597
C G SC P C G C C C P Y+G+ C R +C
Sbjct: 460 DC----GVRSC--------PGDCRGRGRC----ESGRCMCWPGYTGRDCGTR----ACPG 499
Query: 598 YCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPIC 657
C G C + C C G++G C R C C G C + +C
Sbjct: 500 DCRGRGRCVDGR-----CVCNPGFTGEDCGSR-RCPGDCRGHGLCEDG----------VC 543
Query: 658 ICPRGYAGVRCQT 670
+C GY+G C T
Sbjct: 544 VCDAGYSGEDCST 556
Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats.
Identities = 96/328 (29%), Positives = 125/328 (38%), Gaps = 68/328 (20%)
Query: 352 CLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFT 411
C +QG C +C C P YTG C C C G C+ CVC GF+
Sbjct: 191 CNDQGRCVRG--------RCVCFPGYTGPSCGWPSCPGDCQGRGRCVQG--VCVCRAGFS 240
Query: 412 GDTCQQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN-GECSITDSGP 470
G C Q C G + G C C Y G +C C C G C
Sbjct: 241 GPDCSQ---RSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRC----ENG 293
Query: 471 KCMCSPGYSGKKCDTCTCLNGDS------GPKCMCSPGYSGKKCDTCTCL----NGGTCI 520
+C+C+PGY+G+ C +C G S +C+C PGY+G+ C T +C GG C+
Sbjct: 294 RCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCV 353
Query: 521 PNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPP 580
+ C C YTG C + + P C G C E C C
Sbjct: 354 ----DGRCVCWPGYTGEDC------------STRTCPRDCRGRGRCEDGE----CICDTG 393
Query: 581 YSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGG 640
YSG C R SC C+ G C + C C G++G C R +C C G
Sbjct: 394 YSGDDCGVR----SCPGDCNQRGRCEDGR-----CVCWPGYTGTDCGSR-ACPRDCRGRG 443
Query: 641 TCREQNYSLDPDLKPICICPRGYAGVRC 668
C +C+C GY+G C
Sbjct: 444 RCENG----------VCVCNAGYSGEDC 461
Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 118/319 (36%), Gaps = 67/319 (21%)
Query: 373 CAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDTCQQCLNLK---------- 422
C P+ A C G + TC C PG+ G TC + +
Sbjct: 125 CCPASAQAGTGQTDVRTLCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSAS 184
Query: 423 ------CQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN-GECSITDSGPKCMCS 475
C + G CV C C Y G +C + C C G C C+C
Sbjct: 185 GSCPDDCNDQGRCVRG----RCVCFPGYTGPSCGWPSCPGDCQGRGRCV----QGVCVCR 236
Query: 476 PGYSGKKCDTCTCLNGDS------GPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCK 529
G+SG C +C G S G +C+C PGY+G C +C G + +N C
Sbjct: 237 AGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENGRCV 296
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
C YTG C G SC P CS G C +G+ C C P Y+G+ C R
Sbjct: 297 CNPGYTGEDC----GVRSC--------PRGCSQRGRCK--DGR--CVCDPGYTGEDCGTR 340
Query: 590 EDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSL 649
SC C G C + C C G++G CS R +C C G C +
Sbjct: 341 ----SCPWDCGEGGRCVDGR-----CVCWPGYTGEDCSTR-TCPRDCRGRGRCEDGE--- 387
Query: 650 DPDLKPICICPRGYAGVRC 668
CIC GY+G C
Sbjct: 388 -------CICDTGYSGDDC 399
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 210/502 (41%), Gaps = 84/502 (16%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPAR 268
+ + N N C PC +C++ + C C T E+N+ C AP
Sbjct: 245 DGDECENNINECASSPCLNGGICVDGVNMFECTCLAGFTGVRCEVNID----ECASAP-- 298
Query: 269 TCYLDCNHGNL----PSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFD 324
C +G + + +TC CP + + N + C P N GTC D
Sbjct: 299 -----CQNGGICIDGINGYTCSCPLGFSGD-NCENNDDECSSIPCL------NGGTC-VD 345
Query: 325 DDFDPHCICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARC 382
C+C + G C + + PC N G+C + Y C C P YTG C
Sbjct: 346 LVNAYMCVCAPGWTGPTCADNIDECASAPCQNGGVCIDGVNG----YMCDCQPGYTGTHC 401
Query: 383 ESRICE---NKCHNGGTCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKT 433
E+ I E C NGG C+ C+C PGF G C+ +C + CQNG VCV+
Sbjct: 402 ETDIDECARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNIDECASRPCQNGAVCVDGV 461
Query: 434 TGLECDCPKFYYGKNCQ--YSQCKNY-CVNGE-CSITDSGPKCMCSPGYSGKKCDT---- 485
G C C Y G C+ ++C + C+NG C+ +G C C+ G+ G C+T
Sbjct: 462 NGFVCTCSAGYTGVLCETDINECASMPCLNGGVCTDLVNGYICTCAAGFEGTNCETDTDE 521
Query: 486 ---------CTCLNGDSGPKCMCSPGYSGKKCDT----CT---CLNGGTCIPNSKNNVCK 529
TC + +G C C PGY+G C+T C CLNGGTC VC
Sbjct: 522 CASFPCQNGATCTDQVNGYVCTCVPGYTGVLCETDINECASFPCLNGGTCNDQVNGYVCV 581
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
C + CE + ++C C N G C+ + C CLP + G C
Sbjct: 582 CAQDTSVSTCE---------TDRDECASAPCLNGGACMDVVNGFVCTCLPGWEGTNCEIN 632
Query: 590 EDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNY 647
D + + C N GLC + VC C+ G++GI C + CA C NGG C ++
Sbjct: 633 TDECA-SSPCMNGGLC-VDQVNSYVCFCLPGFTGIHCGTEIDECASSPCLNGGQCIDRVD 690
Query: 648 SLDPDLKPICICPRGYAGVRCQ 669
S + C+C GY VRCQ
Sbjct: 691 SYE------CVCAAGYTAVRCQ 706
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 193/462 (41%), Gaps = 74/462 (16%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCY 271
E T+ C PC A C + + + C C T L C+
Sbjct: 511 EGTNCETDTDECASFPCQNGATCTDQVNGYVCTCVPGYTGVL--------CETDINECAS 562
Query: 272 LDCNHG----NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDF 327
C +G + + + C+C T + + C AP N G C D
Sbjct: 563 FPCLNGGTCNDQVNGYVCVCAQD-TSVSTCETDRDECASAPCL------NGGAC-MDVVN 614
Query: 328 DPHCICQENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384
C C + GT CE +N C PC+N G+C + +Y C C P +TG C +
Sbjct: 615 GFVCTCLPGWEGTNCE-INTDECASSPCMNGGLCVDQVN----SYVCFCLPGFTGIHCGT 669
Query: 385 RICE---NKCHNGGTCIATTQT--CVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTG 435
I E + C NGG CI + CVC G+T CQ +C + CQNGGVCV+ G
Sbjct: 670 EIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVNG 729
Query: 436 LECDCPKFYYGKNC--QYSQCKNY-CVN-GECSITDSGPKCMCSPGYSGKKCDT------ 485
C+C Y G NC + +C + C+N G C +G C C GY+G C+T
Sbjct: 730 YVCNCAPGYTGDNCETEIDECASMPCLNGGACIEMVNGYTCQCVAGYTGVICETDIDECA 789
Query: 486 -CTCLNGD------SGPKCMCSPGYSGKKCDT----CT---CLNGGTCIPNSKNNVCKCP 531
C NG +G C C PG++G C+T C CLNGG C+ VC+CP
Sbjct: 790 SAPCQNGGVCTDTINGYICACVPGFTGSNCETNIDECASDPCLNGGICVDGVNGFVCQCP 849
Query: 532 SQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTERED 591
Y+G CE ++ + C C N TCV + C+C+P Y+G+ C D
Sbjct: 850 PNYSGTYCEISL---------DACRSMPCQNGATCVNVGADYVCECVPGYAGQNC--EID 898
Query: 592 SPSCHNY-CDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSC 632
C + C N GLC G C C G+ G+ C E C
Sbjct: 899 INECASLPCQNGGLCIDGIAGY-TCQCRLGYIGVNCEEVGFC 939
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 162/587 (27%), Positives = 220/587 (37%), Gaps = 95/587 (16%)
Query: 129 RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
R+ A TIE V Y L FE NL
Sbjct: 93 RITKARSITFTIEDFMTEVFKDVVEYGIGPEADFNQALGSFEGNLTQDDVIPAPFTVQGD 152
Query: 189 FGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDH 248
F+ N +NR + + + CD C A C +L + + C CP
Sbjct: 153 QAWFIFSTDRNIVNRGFRITFSSDG-------DDCDPNLCQNGAACTDLVNDYACTCPPG 205
Query: 249 LTEELNVTSGKMSCKVAPARTCYLDCNH-GNLPSSHTCLCPDHLTEEL-NVTSG--KMSC 304
T R C +D + + P + C D + + N G C
Sbjct: 206 FT----------------GRNCEIDIDECASDPCQNGGACVDGVNGYVCNCVPGFDGDEC 249
Query: 305 KVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMC---PCLNQGMCYPD 361
+ C +G D C C F G CE VN C PC N G+C
Sbjct: 250 ENNINECASSPCLNGGICVDGVNMFECTCLAGFTGVRCE-VNIDECASAPCQNGGICIDG 308
Query: 362 LTHPEPTYKCHCAPSYTGARCESRICENK---CHNGGTCI--ATTQTCVCPPGFTGDTC- 415
+ Y C C ++G CE+ E C NGGTC+ CVC PG+TG TC
Sbjct: 309 ING----YTCSCPLGFSGDNCENNDDECSSIPCLNGGTCVDLVNAYMCVCAPGWTGPTCA 364
Query: 416 ---QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYS-------QCKNYCVNGECSI 465
+C + CQNGGVC++ G CDC Y G +C+ C+N G+C
Sbjct: 365 DNIDECASAPCQNGGVCIDGVNGYMCDCQPGYTGTHCETDIDECARPPCQN---GGDCVD 421
Query: 466 TDSGPKCMCSPGYSGKKC----DTC---------TCLNGDSGPKCMCSPGYSGKKCDT-- 510
+G C+C+PG+ G C D C C++G +G C CS GY+G C+T
Sbjct: 422 GVNGYVCICAPGFDGLNCENNIDECASRPCQNGAVCVDGVNGFVCTCSAGYTGVLCETDI 481
Query: 511 -----CTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGT 565
CLNGG C +C C + + G CE + ++C C N T
Sbjct: 482 NECASMPCLNGGVCTDLVNGYICTCAAGFEGTNCE---------TDTDECASFPCQNGAT 532
Query: 566 CVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSKQGKPVCTCVNGWSGI 624
C C C+P Y+G C D C ++ C N G C+ G VC C S
Sbjct: 533 CTDQVNGYVCTCVPGYTGVLC--ETDINECASFPCLNGGTCNDQVNGY-VCVCAQDTSVS 589
Query: 625 TC-SERVSCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQ 669
TC ++R CA C NGG C +D +C C G+ G C+
Sbjct: 590 TCETDRDECASAPCLNGGAC------MDVVNGFVCTCLPGWEGTNCE 630
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 198/495 (40%), Gaps = 71/495 (14%)
Query: 216 AHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCN 275
A N+ + C PC +CI+ + + C C T + + C P + DC
Sbjct: 364 ADNI-DECASAPCQNGGVCIDGVNGYMCDCQPGYTG-THCETDIDECARPPCQN-GGDCV 420
Query: 276 HGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQE 335
G + + C+C + LN + C P C +G D C C
Sbjct: 421 DG--VNGYVCICAPGF-DGLNCENNIDECASRP-------CQNGAVCVDGVNGFVCTCSA 470
Query: 336 NFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NK 390
+ G CE N + PCLN G+C DL + Y C CA + G CE+ E
Sbjct: 471 GYTGVLCETDINECASMPCLNGGVC-TDLVN---GYICTCAAGFEGTNCETDTDECASFP 526
Query: 391 CHNGGTCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFY 444
C NG TC C C PG+TG C+ +C + C NGG C ++ G C C +
Sbjct: 527 CQNGATCTDQVNGYVCTCVPGYTGVLCETDINECASFPCLNGGTCNDQVNGYVCVCAQDT 586
Query: 445 YGKNCQ--YSQCKNY-CVNG-ECSITDSGPKCMCSPGYSGKKCDTCT-------CLNGD- 492
C+ +C + C+NG C +G C C PG+ G C+ T C+NG
Sbjct: 587 SVSTCETDRDECASAPCLNGGACMDVVNGFVCTCLPGWEGTNCEINTDECASSPCMNGGL 646
Query: 493 -----SGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQYTGRRCE 540
+ C C PG++G C D C CLNGG CI + C C + YT RC+
Sbjct: 647 CVDQVNSYVCFCLPGFTGIHCGTEIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQ 706
Query: 541 CAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCD 600
+ ++C C N G CV C C P Y+G C E E C
Sbjct: 707 INI---------DECASAPCQNGGVCVDGVNGYVCNCAPGYTGDNC-ETEIDECASMPCL 756
Query: 601 NAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNYSLDPDLKPICI 658
N G C G C CV G++G+ C + CA C NGG C + IC
Sbjct: 757 NGGACIEMVNGY-TCQCVAGYTGVICETDIDECASAPCQNGGVCTDTINGY------ICA 809
Query: 659 CPRGYAGVRCQTLVH 673
C G+ G C+T +
Sbjct: 810 CVPGFTGSNCETNID 824
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 166/376 (44%), Gaps = 58/376 (15%)
Query: 331 CICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE 388
C C F GT CE + + PC N C T Y C C P YTG CE+ I E
Sbjct: 504 CTCAAGFEGTNCETDTDECASFPCQNGATC----TDQVNGYVCTCVPGYTGVLCETDINE 559
Query: 389 ---NKCHNGGTC--IATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECD 439
C NGGTC CVC + TC+ +C + C NGG C++ G C
Sbjct: 560 CASFPCLNGGTCNDQVNGYVCVCAQDTSVSTCETDRDECASAPCLNGGACMDVVNGFVCT 619
Query: 440 CPKFYYGKNCQYS--QCKNY-CVNGE-CSITDSGPKCMCSPGYSGKKC----DTCT---C 488
C + G NC+ + +C + C+NG C + C C PG++G C D C C
Sbjct: 620 CLPGWEGTNCEINTDECASSPCMNGGLCVDQVNSYVCFCLPGFTGIHCGTEIDECASSPC 679
Query: 489 LNGD------SGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQYT 535
LNG +C+C+ GY+ +C D C C NGG C+ VC C YT
Sbjct: 680 LNGGQCIDRVDSYECVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVNGYVCNCAPGYT 739
Query: 536 GRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSC 595
G CE + + CAS+ C N G C+ + +C+C+ Y+G C E +
Sbjct: 740 GDNCETEIDE--CASMP-------CLNGGACIEMVNGYTCQCVAGYTGVIC-ETDIDECA 789
Query: 596 HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNYSLDPDL 653
C N G+C+ + G +C CV G++G C + CA C NGG C +D
Sbjct: 790 SAPCQNGGVCTDTINGY-ICACVPGFTGSNCETNIDECASDPCLNGGIC------VDGVN 842
Query: 654 KPICICPRGYAGVRCQ 669
+C CP Y+G C+
Sbjct: 843 GFVCQCPPNYSGTYCE 858
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 204/499 (40%), Gaps = 80/499 (16%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
N + C +PC A+C++ + C C T L C+ + C +
Sbjct: 440 ENNIDECASRPCQNGAVCVDGVNGFVCTCSAGYTGVL--------CETDINECASMPCLN 491
Query: 277 G----NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPH-C 331
G +L + + C C E N + C P + N TC D + + C
Sbjct: 492 GGVCTDLVNGYICTCAAGF-EGTNCETDTDECASFPCQ------NGATCT--DQVNGYVC 542
Query: 332 ICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES---RI 386
C + G CE N + PCLN G C + Y C CA + + CE+
Sbjct: 543 TCVPGYTGVLCETDINECASFPCLNGGTCNDQVNG----YVCVCAQDTSVSTCETDRDEC 598
Query: 387 CENKCHNGGTCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDC 440
C NGG C+ C C PG+ G C+ +C + C NGG+CV++ C C
Sbjct: 599 ASAPCLNGGACMDVVNGFVCTCLPGWEGTNCEINTDECASSPCMNGGLCVDQVNSYVCFC 658
Query: 441 PKFYYGKNC--QYSQCKNY-CVNG-ECSITDSGPKCMCSPGYSGKKC----DTC------ 486
+ G +C + +C + C+NG +C +C+C+ GY+ +C D C
Sbjct: 659 LPGFTGIHCGTEIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQINIDECASAPCQ 718
Query: 487 ---TCLNGDSGPKCMCSPGYSGKKCDT-------CTCLNGGTCIPNSKNNVCKCPSQYTG 536
C++G +G C C+PGY+G C+T CLNGG CI C+C + YTG
Sbjct: 719 NGGVCVDGVNGYVCNCAPGYTGDNCETEIDECASMPCLNGGACIEMVNGYTCQCVAGYTG 778
Query: 537 RRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCH 596
CE + ++C C N G C C C+P ++G C D +
Sbjct: 779 VICETDI---------DECASAPCQNGGVCTDTINGYICACVPGFTGSNCETNIDECA-S 828
Query: 597 NYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNYSLDPDLK 654
+ C N G+C G VC C +SG C + +C C NG TC ++
Sbjct: 829 DPCLNGGICVDGVNGF-VCQCPPNYSGTYCEISLDACRSMPCQNGATC------VNVGAD 881
Query: 655 PICICPRGYAGVRCQTLVH 673
+C C GYAG C+ ++
Sbjct: 882 YVCECVPGYAGQNCEIDIN 900
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 122/211 (57%), Gaps = 8/211 (3%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
+ I N+ +RE + + + P G+A+DW+ + YWTD+G + I S L G
Sbjct: 535 LKWIERANMDGSQRE---RLIEEGVDVPEGLAIDWIDRKFYWTDSG---KSLIEGSDLNG 588
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
+ + ++ +++P IA+ P++ R+FWT++GI PRI +S+ G + + +++ WP+G
Sbjct: 589 KHREIIIKEDISQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGRLVIASSDLVWPSG 648
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
ITIDY + +LYW D K IE NL+G R + D G+ P+ + VFED+++FS +
Sbjct: 649 ITIDYVTDKLYWCDTKLSVIEMANLDGSKRQRLAQN-DVGH-PFAMAVFEDHVWFSDWTM 706
Query: 181 NNILKINKFGNSDFNVLANNLNRASDVLILQ 211
+I++++K + L ++ + S ++++
Sbjct: 707 PSIIRVDKRTGKNRVRLRGSMLKPSSLVVVH 737
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 95/192 (49%), Gaps = 18/192 (9%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
N TR +R N++ +S G+A++W+ + L W++ + I V+ ++G R LL
Sbjct: 104 NGTRQERVCNIEKNVS------GMAINWINEELIWSN---QQEGIITVTDMKGNNSRVLL 154
Query: 68 NTGLNEPYDIALEPLSGRMFW-TELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYP 126
LN P ++A++P+ +FW +E+ + + A ++G + L+ + + T +++D
Sbjct: 155 R-ALNYPANVAIDPIERFIFWSSEVAVAGSLHRADLNGVEEKILLQTS-ERITAVSLDVL 212
Query: 127 SQRLYWA----DPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182
++L+W D I S N +G + H + + + + +F + +++ST++
Sbjct: 213 DKQLFWIQYSRDGSNSHIYSCNYDGGSVHLSKHLTQHNF--FAMSLFGNQIFYSTWKKKT 270
Query: 183 ILKINKFGNSDF 194
I NK D
Sbjct: 271 IWIANKHSGKDM 282
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 50 SNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN 109
S +I +G TLL+ + + + +P+ ++++ +K I A++DG +
Sbjct: 492 SQDIRHMHFDGTDYGTLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRER 550
Query: 110 LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF 169
L++ + P G+ ID+ ++ YW D IE +LNGK R ++ + + + +
Sbjct: 551 LIEEGVDVPEGLAIDWIDRKFYWTDSGKSLIEGSDLNGKHREIIIKEDISQPRGIAVHPM 610
Query: 170 EDNLYFSTYRTN 181
L+++ N
Sbjct: 611 AKRLFWTDMGIN 622
Score = 36.2 bits (82), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 102 IDGKNKFNLVDNNIQWPTGITI----DYPSQRLYWADPKARTIESINLNGKDRFVVYHTE 157
++G N LV + G+++ Y +R+YW DP+ + ++ + LNG + V + E
Sbjct: 61 LEGTNHEQLVAD-----AGVSVIMDFHYNKERIYWVDPERQLLQRVFLNGTRQERVCNIE 115
Query: 158 DNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLI 209
N + + L +S + I+ + ++ VL LN ++V I
Sbjct: 116 KN-VSGMAINWINEELIWSN-QQEGIITVTDMKGNNSRVLLRALNYPANVAI 165
Score = 33.5 bits (75), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 80/217 (36%), Gaps = 58/217 (26%)
Query: 391 CHNGGTCIATTQ--TCVCPPGFTGD--------TCQQCLNLKCQNGGVCVNKTTGLECDC 440
C C++ + TC C GFTGD C+ + + CVN G C C
Sbjct: 843 CSTWAECVSEGENATCQCLKGFTGDGKLCFDIDECEMGITICPPTSSKCVNTEGGYVCQC 902
Query: 441 PKFYYGKNCQYSQCKNYCVN-GECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMC 499
+ Y G +C++ EC + M + G + TC N + CMC
Sbjct: 903 SEGYRGDGI-------HCLDINECQLG------MHTCG------ENATCTNMEGNYTCMC 943
Query: 500 SPGYS--GKKCDTCTCLNGGTCIPN--SKNNVCKCPSQYTGRRCECAVGDTSCASLANKC 555
+ S G+ C T + + +N +CPS Y G
Sbjct: 944 AGSLSEPGQICADSTPPSHPMEDSHYSVRNGYRECPSSYDG------------------- 984
Query: 556 TPNYCSNNGTCVLIEG--KPSCKCLPPYSGKQCTERE 590
YC NG C+ IE + +C C+ Y G++C R+
Sbjct: 985 ---YCLYNGVCMYIEAVDRYACNCVFGYVGERCQHRD 1018
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 246/608 (40%), Gaps = 141/608 (23%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
+ I N+ +RE + + + P G+A+DW+ + YWTD R I S L G
Sbjct: 530 LKWIERANMDGSQRE---RLIEEAVDVPEGLAIDWIDRKFYWTD---RGKALIEGSDLNG 583
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
+ + ++ +++P IA+ P++ R+FWT++GI PRI +S+ G + + +++ WP+G
Sbjct: 584 KHREIIIKEEVSQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGRRVIASSDLVWPSG 643
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
ITIDY + +LYW D K IE NL+G R + D G+ P+ + VFED+++FS +
Sbjct: 644 ITIDYLTDKLYWCDAKQSVIEMANLDGSKRQRLAQN-DVGH-PFAIAVFEDHVWFSDWTM 701
Query: 181 NNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSA----LCIN 236
+++++NK + L ++ + S ++++ H + D HQ+ +C
Sbjct: 702 PSVIRVNKRTGKNRVRLRGSMLKPSSLVVV------HPLAKPGSDPCLHQNGGCEHICKE 755
Query: 237 LPSSHTCLCPDHLTEELNVTSGKM-----SCKVAPARTCYLDCNHGNLPSSHTCLCPDHL 291
S CLC + + GKM ++ PA D ++ P
Sbjct: 756 RFGSAQCLCREGF---VKAPDGKMCLALNGHQIPPAVGSEADLSNQVTP----------- 801
Query: 292 TEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDP-HCICQENFYGTYCEKVNNSMC 350
L+V S + + ++ +DD P C GT+ +
Sbjct: 802 ---LDVLSRNRGSEDNSTESQHMLVAEIMVSDNDDCGPIRC-------GTWGQ------- 844
Query: 351 PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGF 410
C+++G C C +TG + ++C + G T T VCPP
Sbjct: 845 -CVSEG----------ENATCQCLKGFTG---DGKLCSDINECG------TSTTVCPP-- 882
Query: 411 TGDTCQQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGP 470
C+N G C C + Y G +C++ +
Sbjct: 883 --------------TSSKCINTEGGYVCQCSEGYRGDGI-------HCLDID-------- 913
Query: 471 KCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYS--GKKCDTCT----CLNGGTCIPNSK 524
+C G + TC N + CMC+ S G+ C T + G + +
Sbjct: 914 ECQLGIHTCG---ENATCTNTEGNYTCMCAGTLSEPGQMCPDSTPPSVLMEDGRY--SVR 968
Query: 525 NNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG--KPSCKCLPPYS 582
N+ +CP Y G YC NG C+ IE + +C C+ Y
Sbjct: 969 NSYQECPPSYDG----------------------YCLYNGVCMYIEAVDRYACNCVFGYV 1006
Query: 583 GKQCTERE 590
G++C R+
Sbjct: 1007 GERCQHRD 1014
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 50 SNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN 109
S +I +G +LL+ + + + +P+ ++++ +K I A++DG +
Sbjct: 487 SQDIRHVRFDGTDYGSLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRER 545
Query: 110 LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF 169
L++ + P G+ ID+ ++ YW D IE +LNGK R ++ E + + +
Sbjct: 546 LIEEAVDVPEGLAIDWIDRKFYWTDRGKALIEGSDLNGKHREIIIKEEVSQPRGIAVHPM 605
Query: 170 EDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
L+++ N ++ + V+A++
Sbjct: 606 AKRLFWTDMGINPRIESSSLQGIGRRVIASS 636
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 30 GVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWT 89
G+A++W+ + L W++ + I V+ ++G R LL + L P ++A++P+ +FW+
Sbjct: 120 GMAINWINEELIWSN---QQEGIITVTDMKGNNSRVLL-SALKYPANVAIDPVERFIFWS 175
Query: 90 ELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWA----DPKARTIESINL 145
+ + A ++G L++ + + T +++D +RL+W D I S N
Sbjct: 176 S-EVAGSLHRADLNGVEVKILLETS-ERITAVSLDVLDKRLFWIQNNRDGSNSYICSCNY 233
Query: 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
+G V ++ + + + +F D +++ST++ I NK
Sbjct: 234 DGGS--VHFNKHLTQHSLFAMSLFGDRIFYSTWKKKTIWIANK 274
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 38 KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWT--ELGIKP 95
+ LYW D + + L G ++ T+ N N +A+ ++ + W+ + GI
Sbjct: 86 ERLYWVDLERQLLQRVF---LNGTRQETVCNIEKNVS-GMAINWINEELIWSNQQEGI-- 139
Query: 96 RISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYH 155
I+ + G N L+ + +++P + ID + ++W+ A ++ +LNG + ++
Sbjct: 140 -ITVTDMKGNNSRVLL-SALKYPANVAIDPVERFIFWSSEVAGSLHRADLNGVEVKILLE 197
Query: 156 TEDNGYKPYKLEVFEDNLYF 175
T + L+V + L++
Sbjct: 198 TSER-ITAVSLDVLDKRLFW 216
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/508 (24%), Positives = 212/508 (41%), Gaps = 72/508 (14%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
+ I N+ +RE + + P G+A+DW+G+ YWTD R + I S L G
Sbjct: 533 LKWIERANMDGSQRERLFEEAVDV---PEGLAIDWIGRKFYWTD---RGRSLIEGSDLNG 586
Query: 61 RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG 120
+ + ++ +++P IA+ P++ R+FWT++G PRI +S+ G + + +++ WP+G
Sbjct: 587 KYREIIIKEDISQPRGIAVHPVAKRLFWTDMGTNPRIESSSLQGIGRQVIASSDLVWPSG 646
Query: 121 ITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT 180
ITIDY + +LYW D K IE NL+G R + D G+ P+ + VFED+++FS +
Sbjct: 647 ITIDYLTDKLYWCDAKQSVIEMSNLDGSRRQRLAQN-DVGH-PFAVAVFEDHVWFSDWTM 704
Query: 181 NNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSS 240
+++++NK + L ++ + S ++++ + A TN C + +C +
Sbjct: 705 PSVIRVNKRTGKNRVRLRGSMLKPSSLVVV--HPLAKPGTNPCLHQNGGCEHICKESFGT 762
Query: 241 HTCLCPDHLTEELNVTSGKMSCKVAPARTCY---LDCNHGNLPSSHTCLCPDHLTEELNV 297
CLC + L GKM + D + G +P P E N+
Sbjct: 763 AQCLCHEGF---LKAPDGKMCLALNGQEILAGRGKDLSDGVMPVD---TLPRSRELEDNL 816
Query: 298 TSGKMSCKVAPARTCYLDCNHGTCE-----FDDDFDPHCICQENFY--GTYCEKVNN--- 347
T + + DC C + D C C + F G C ++
Sbjct: 817 TESQHILVAEIMVSDDEDCGAAGCSAQARCVTEGEDATCQCLKGFAGDGNLCSDIDECEL 876
Query: 348 --SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARC------ESRICENKCHNGGTCIA 399
S+CP + + + E + C C+ Y G E ++ + C TC
Sbjct: 877 GTSVCPPTSS-----ECINTEGGHVCRCSEGYQGDGIHCLDIDECQLGVHTCGENATCTN 931
Query: 400 TT--QTCVC---------------PPGFTGD-----------TCQQCLNLKCQNGGVC-- 429
T TC C PP G+ C + C +GGVC
Sbjct: 932 TEGNYTCTCAGRPSEPGRICPDPTPPSHLGEDGRYSVRNSYSECPPSHDGYCLHGGVCMY 991
Query: 430 VNKTTGLECDCPKFYYGKNCQYSQCKNY 457
+ C+C Y G+ CQ+ K +
Sbjct: 992 IEAVDSYACNCVFGYVGERCQHRDLKWW 1019
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 45/303 (14%)
Query: 8 NVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL 67
N TR ++ NL+ +S G+A++W+ + L W++ + I V+ ++G R LL
Sbjct: 104 NGTRQEKVCNLEKNVS------GMAINWINEELIWSN---QQEGTITVTDMKGNNSRVLL 154
Query: 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS 127
+ L P ++A++P+ MFW+ + + + A + G L++ + + +++D
Sbjct: 155 -SALKYPANVAVDPVERLMFWSSV-VAGSLHRADVTGVEVRLLLETSEE-IAAVSLDVLD 211
Query: 128 QRLYWA----DPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
+RL+W + + I S + +G H + + + +F D++++ST++ I
Sbjct: 212 KRLFWIQYNREGGSSRICSCDYDGGSVHFSKHLTQ--HNVFAMSLFGDHIFYSTWKKKTI 269
Query: 184 LKINKFGNSDFNVLANNLNRAS------DVLILQENKQAHNVTNHCDDKPCH------QS 231
NK D ++ NLN A V+ +A D K C +
Sbjct: 270 WVANKHTGKD--MVKMNLNPAFVPPGGIKVVHPLVQPKAEGDAWASDQKLCKLRKGNCRG 327
Query: 232 ALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG------NLPSSHTC 285
++C P SH C C + T + K C NHG N P S+ C
Sbjct: 328 SMCGQEPKSHVCTCAE------GYTLSQDGRKCEDVNECAF-WNHGCTLGCENTPGSYYC 380
Query: 286 LCP 288
CP
Sbjct: 381 TCP 383
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 50 SNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN 109
S +I +G TLLN + + +P+ ++++ +K I A++DG +
Sbjct: 490 SQDIRHMHFDGTDYETLLNQQIGMVLALDHDPVENKVYFAHTALK-WIERANMDGSQRER 548
Query: 110 LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF 169
L + + P G+ ID+ ++ YW D IE +LNGK R ++ + + + +
Sbjct: 549 LFEEAVDVPEGLAIDWIGRKFYWTDRGRSLIEGSDLNGKYREIIIKEDISQPRGIAVHPV 608
Query: 170 EDNLYFSTYRTNNILKINKFGNSDFNVLANN 200
L+++ TN ++ + V+A++
Sbjct: 609 AKRLFWTDMGTNPRIESSSLQGIGRQVIASS 639
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 77/202 (38%), Gaps = 46/202 (22%)
Query: 416 QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN-GECSITDSGPKCMC 474
+ C C CV + C C K + G N C + EC + S +C
Sbjct: 833 EDCGAAGCSAQARCVTEGEDATCQCLKGFAGDG-------NLCSDIDECELGTS----VC 881
Query: 475 SPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGK-----KCDTC-----TCLNGGTCIPNSK 524
P S C+N + G C CS GY G D C TC TC
Sbjct: 882 PPTSS-------ECINTEGGHVCRCSEGYQGDGIHCLDIDECQLGVHTCGENATCTNTEG 934
Query: 525 NNVCKC---PSQYTGRRC-----ECAVGDTSCASLAN---KCTPN---YCSNNGTCVLIE 570
N C C PS+ GR C +G+ S+ N +C P+ YC + G C+ IE
Sbjct: 935 NYTCTCAGRPSE-PGRICPDPTPPSHLGEDGRYSVRNSYSECPPSHDGYCLHGGVCMYIE 993
Query: 571 GKPS--CKCLPPYSGKQCTERE 590
S C C+ Y G++C R+
Sbjct: 994 AVDSYACNCVFGYVGERCQHRD 1015
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 10/242 (4%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL-NTGLNEPYDIAL 79
+ L G+A+DWVG+NLYW D+ S N I V+ LE K+RTLL + +++P IA+
Sbjct: 1550 IADGLDITEGIALDWVGRNLYWVDS---SLNTIEVANLEDPKQRTLLVHQNVSQPRGIAV 1606
Query: 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART 139
+P G MFWT+ G P I AS+DG ++ +V I WP I +DY + R+Y+AD K
Sbjct: 1607 DPRKGVMFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDF 1666
Query: 140 IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL-A 198
I+ +N +G R V + P+ L +FED +Y+S R + K+ N + +
Sbjct: 1667 IDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDRRLQKLQVYPKYPNGTTSEYPS 1726
Query: 199 NNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALC-INLPSSHTCLCPDHLTEELNVTS 257
+ ++A V+ + Q N C PC S LC +N ++ TC CP + E+L+ +
Sbjct: 1727 HTFSKALGVVAVHPVLQPVIKNNPCSTNPC--SHLCLLNNKNTFTCKCP--MGEKLDASG 1782
Query: 258 GK 259
K
Sbjct: 1783 KK 1784
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 116/195 (59%), Gaps = 12/195 (6%)
Query: 6 SGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRT 65
G ++++K+ ++LK+++ PR +AVDW+ LY ++G R I VS+ +G ++
Sbjct: 456 EGEISQIKK-LSLKSLVY----PRCLAVDWITNTLYIIESGSR---RIDVSSYDGERRTV 507
Query: 66 LLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY 125
LL GL P DIAL+PL G MF+T + ++ A++DG N+ LV+ + +GI +D
Sbjct: 508 LLADGLTLPLDIALDPLRGEMFFTN---QLKLEAAAMDGTNRRTLVNTHTHQVSGIVVDI 564
Query: 126 PSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILK 185
++R+YW DPK +ESI+ G DR +V + P+ L +F+ LY++ + +++
Sbjct: 565 TAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQYLYWTDWTRLGVIQ 624
Query: 186 INKFGNSDFNVLANN 200
+ KFG SD +L +N
Sbjct: 625 VEKFG-SDTKLLWSN 638
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 138/276 (50%), Gaps = 29/276 (10%)
Query: 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNN--------- 52
++I++GN + +++++ + P +AVD+ NL+ N
Sbjct: 4242 SAIANGNQSHEGQKLDVDFAAMGVV-PTAIAVDYTTGNLFIAAVSENIENGLVTARKKRM 4300
Query: 53 -----------IMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGAS 101
I V +GR + ++ L +P + P +GR+ +++ G+ +I A
Sbjct: 4301 SEPIDNQNTGFIFVCLPDGRYLKKIVAGHLQQPTALITAPSAGRICYSDAGLHAKIECAD 4360
Query: 102 IDGKNKFNLVDNNIQWPTGITIDY-PSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160
+DG ++ +V + + PT + ID R+YW DPK R ++++N++G +R V H +
Sbjct: 4361 MDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTVVH---DR 4417
Query: 161 YKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQE-NKQAHNV 219
+ PY ++VFE+++Y+ + + + +KFG +VLA++L V + Q+ K
Sbjct: 4418 HIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDGHTVRVSQKYAKDTQRT 4477
Query: 220 TNHCDDKPCHQSALCINLPSS-HTCLCPDHLTEELN 254
+ C+ C S LC++LPS+ CLCPD + +L+
Sbjct: 4478 VSGCERAQC--SHLCVSLPSTGFACLCPDGIVPQLD 4511
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 14/240 (5%)
Query: 19 KTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDI 77
+TVL N++ G+AVDWVG+ LY + R +I V L+GR +TL+ + +P I
Sbjct: 3382 ETVLRHNVYGTEGIAVDWVGRKLYMLN---RQERSIRVCELDGRFCKTLIRDRIQQPKAI 3438
Query: 78 ALEPLSGRMFWTELGIKPRISGASIDGKNK-----FNLVDNNIQWPTGITIDYPSQRLYW 132
+ P G +F+TE ++P I ++DG + F L ++++ WP I IDY S RL+W
Sbjct: 3439 VVHPGKGYLFFTEWSLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFW 3498
Query: 133 ADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192
D I ++ +G R + + + VF+D LY++ + +L+ +K+
Sbjct: 3499 GDAHLNEIGFMDFDGNGRRHIPAQRTSHVS--SMVVFDDYLYWADWNLREVLRCDKWTGK 3556
Query: 193 DFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP--SSHTCLCPDHLT 250
+ +L + +D+ I+ +Q N C D S LC+ + +TC CPD
Sbjct: 3557 NETILKKTVQLPNDLRIVHPMRQPA-YPNPCGDNNGGCSHLCLIGAGGNGYTCSCPDQFV 3615
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFW 88
+ +A+DW+ N+Y+ + +N I VS L+G ++ LL T P IA++P+S ++W
Sbjct: 2206 KSLAIDWINYNMYFINHDAERTN-IEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYW 2264
Query: 89 TELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148
+ G KP I + +DG + +V + I PT + +D S+ +YW+D K I + G
Sbjct: 2265 ADQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRSTGG 2324
Query: 149 DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL-----ANNLNR 203
+V + + + N+Y++ R + + N +L A +L
Sbjct: 2325 TPELV---RSDIASAAGVALHGQNMYWTDNRLEKLFRATSKPNQTSLLLSPTTVAASLKD 2381
Query: 204 ASDVLILQENKQAH-----NVTNHCDDKPCHQSALCINLPSSHTCLC 245
DV + N Q +T++ PC Q LC P + T C
Sbjct: 2382 IGDVAVFSSNNQPRASSPCQITDNLRKSPCTQ--LCFATPGTQTPTC 2426
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 17/177 (9%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTE 90
+ +DW+ + +Y+T G +M G T+ + Y +A++P SG +FW++
Sbjct: 2534 MKLDWLTQKIYFTTGRG---GKVMAIDTAGEHLSTIASGDWT--YALAIDPCSGLLFWSD 2588
Query: 91 LGIK-------PRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESI 143
G K PRI +++ G ++ +V +I P I +D+ +Q++YWAD IE
Sbjct: 2589 SGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWADVNRLNIEVA 2648
Query: 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDF-NVLAN 199
+ +G++R V+ +GY+ L++++ LY S +N + +I+K S NV+++
Sbjct: 2649 DYDGQNRKVIA----SGYRAKSLDIWDRWLYMSDPLSNGVFRIDKESGSGLENVVSD 2701
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 25/247 (10%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------NTGLNEPYDIALEPLSG 84
+ DW G+NL G + + I + +G++ R+++ T + P IA++ G
Sbjct: 1887 LGFDWNGRNLV---VGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKG 1943
Query: 85 RMFWTELG---IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIE 141
+FW + G +++ A +DG N + N++ I ID + R+Y+++ KA I
Sbjct: 1944 YVFWLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHIAIDTTNTRVYFSEAKAGRIS 2003
Query: 142 SINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS---DFNVLA 198
S+ +G+DR Y D G +P L + D L+++ ++I G+S +
Sbjct: 2004 SVTYDGQDRH--YVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQWTHFK 2061
Query: 199 NNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP-SSHTCLCPDHLTEELNVTS 257
++ +++ LQ + H ++ C +CI L + TC C + V
Sbjct: 2062 KDVENLANIKALQPRASSSGHPCHINNGNCDH--ICIPLMFAQRTCTCANGY-----VKD 2114
Query: 258 GKMSCKV 264
G+ SCK+
Sbjct: 2115 GQTSCKL 2121
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 31 VAVDWVGKNLYWTDAGGRSSNNIMVSTL----EGRKKRTLLNTGLNEPYDIALEPLSGRM 86
++ DW+ K LY+ D S + + R L T L +P + + P G +
Sbjct: 802 MSFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLITELRDPVSVVVHPWKGLL 861
Query: 87 FWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146
F+ E I IDG+N + + + P+ + ID+ RL W D +TI ++ +
Sbjct: 862 FYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLKTISCMDFD 921
Query: 147 GKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASD 206
GK+ VV DN P + + + +Y+ R +I +++K ++
Sbjct: 922 GKN--VVKLDIDNPI-PVAITIMNEYIYYVHQRPYSIRRVHKKNGGGSKIVREFGADERS 978
Query: 207 VLILQE-NKQAHNVTNHCDDKPCHQS---ALCINLPSS 240
+ L+ + Q + + + PC S LC PS
Sbjct: 979 IFSLKACSHQNQPIPDDSREHPCRASQCTQLCFATPSE 1016
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 8 NVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRT 65
N+ K + + +L + P +AVD V + LYW D G + + I S L+G ++
Sbjct: 2228 NIEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQGQKPT--IQRSFLDGSRREV 2285
Query: 66 LLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY 125
++++G+ EP D+ ++ S ++W++ + S G + LV ++I G+ +
Sbjct: 2286 IVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRSTGGTPE--LVRSDIASAAGVALH- 2342
Query: 126 PSQRLYWADPKARTI 140
Q +YW D + +
Sbjct: 2343 -GQNMYWTDNRLEKL 2356
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 9 VTRVKREMNLKTVLSNLHDPRGV------AVDWVGKNLYWTDAGGRSSN-NIMVSTLEGR 61
+ R + + +LSN P V AVD ++W D GG +++ + + L+G
Sbjct: 1908 IIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVARAGLDGS 1967
Query: 62 KKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGI 121
+ + L E IA++ + R++++E RIS + DG+++ ++ + + P G+
Sbjct: 1968 NPLVIASNDLAELDHIAIDTTNTRVYFSEAKAG-RISSVTYDGQDRHYVLSDGGRQPNGL 2026
Query: 122 TIDYPSQRLYWADPKARTIESINLNG 147
+ RL++AD +IE +NG
Sbjct: 2027 A--FYGDRLFYADSAFDSIEVATING 2050
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136
+A + L+ R++W+++ K +I A+ +G N + + + GI +D+ + LYW D
Sbjct: 1517 LAWDSLTDRIYWSDIREK-KILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSS 1575
Query: 137 ARTIESINL-NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFN 195
TIE NL + K R ++ H + + ++ + ++++ + N ++ +D
Sbjct: 1576 LNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWGQNPCIERASMDGTDRQ 1635
Query: 196 VLA 198
++
Sbjct: 1636 IIV 1638
>sp|P07207|NOTCH_DROME Neurogenic locus Notch protein OS=Drosophila melanogaster GN=N PE=1
SV=3
Length = 2703
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 182/425 (42%), Gaps = 84/425 (19%)
Query: 316 CNHGTCEFDDDFDPHCICQENFYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHC 373
C+ G C DD C+C + G C+K N PC G C + +Y C C
Sbjct: 611 CHRGKC-IDDVNSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDRVG----SYYCQC 665
Query: 374 APSYTGARCESRICE---NKCHNGGTCIATTQT--CVCPPGFTGDTCQ----QCLNLKCQ 424
+G CE + E N C+NG TCI + C C PGFTG C+ +C++ C
Sbjct: 666 QAGTSGKNCEVNVNECHSNPCNNGATCIDGINSYKCQCVPGFTGQHCEKNVDECISSPCA 725
Query: 425 NGGVCVNKTTGLECDCPKFYYGKNC--QYSQC-KNYCVN-GECSITDSGPKCMCSPGYSG 480
N GVC+++ G +C+CP+ +Y +C +C N CVN G C + C C PGY+G
Sbjct: 726 NNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRCEDGINEFICHCPPGYTG 785
Query: 481 KKC----DTC---------TCLNGDSGPKCMCSPGYSGKKCDTCT-------CLNGGTCI 520
K+C D C TC + + C C PGY+G+KC+T C NGGTCI
Sbjct: 786 KRCELDIDECSSNPCQHGGTCYDKLNAFSCQCMPGYTGQKCETNIDDCVTNPCGNGGTCI 845
Query: 521 PNSKNNVCKCPSQYTGRRCECAVGDTSCASLAN--KCTPNY------------------- 559
C C +TGR CE + + N KCTP+
Sbjct: 846 DKVNGYKCVCKVPFTGRDCESKMDPCASNRCKNEAKCTPSSNFLDFSCTCKLGYTGRYCD 905
Query: 560 -----------CSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSY 607
C N +C+ + G C C Y G+ C D C ++ C N G C
Sbjct: 906 EDIDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCAINTDD--CASFPCQNGGTC-L 962
Query: 608 SKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAG 665
G C CV+G+ G C ++ + C NG TC + S C CP G++G
Sbjct: 963 DGIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSY------TCTCPLGFSG 1016
Query: 666 VRCQT 670
+ CQT
Sbjct: 1017 INCQT 1021
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 212/533 (39%), Gaps = 114/533 (21%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLP 280
N CD PCH+ CI+ +S CLC T + C+ P C D + +
Sbjct: 604 NDCDSNPCHRGK-CIDDVNSFKCLCDPGYTGYI-CQKQINECESNP---CQFDGHCQDRV 658
Query: 281 SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGT 340
S+ C C TSGK +C+V CN+G D C C F G
Sbjct: 659 GSYYCQCQAG-------TSGK-NCEVNVNECHSNPCNNGATCIDGINSYKCQCVPGFTGQ 710
Query: 341 YCEK----------VNNSMC------------------------------PCLNQGMCYP 360
+CEK NN +C PC+N+G C
Sbjct: 711 HCEKNVDECISSPCANNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRCED 770
Query: 361 DLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNGGTCIATTQ--TCVCPPGFTGDTC 415
+ + CHC P YTG RCE I E N C +GGTC +C C PG+TG C
Sbjct: 771 GINE----FICHCPPGYTGKRCELDIDECSSNPCQHGGTCYDKLNAFSCQCMPGYTGQKC 826
Query: 416 Q----QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQ---CKNYCVNGECSITDS 468
+ C+ C NGG C++K G +C C + G++C+ N C N E T S
Sbjct: 827 ETNIDDCVTNPCGNGGTCIDKVNGYKCVCKVPFTGRDCESKMDPCASNRCKN-EAKCTPS 885
Query: 469 GP----KCMCSPGYSGKKCDT--------------CTCLNGDSGPKCMCSPGYSGKKC-- 508
C C GY+G+ CD +CLN +C+C+ GY G+ C
Sbjct: 886 SNFLDFSCTCKLGYTGRYCDEDIDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCAI 945
Query: 509 --DTCT---CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNN 563
D C C NGGTC+ + C C + G+ CE + N+C C N
Sbjct: 946 NTDDCASFPCQNGGTCLDGIGDYSCLCVDGFDGKHCETDI---------NECLSQPCQNG 996
Query: 564 GTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSG 623
TC +C C +SG C + D + C N G C G C+C+ G+SG
Sbjct: 997 ATCSQYVNSYTCTCPLGFSGINC-QTNDEDCTESSCLNGGSCIDGINGYN-CSCLAGYSG 1054
Query: 624 ITCSERVSC--AHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHY 674
C +++ ++ C NG TC EQN C CP G+ G +C V +
Sbjct: 1055 ANCQYKLNKCDSNPCLNGATCHEQNNEY------TCHCPSGFTGKQCSEYVDW 1101
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 181/432 (41%), Gaps = 70/432 (16%)
Query: 284 TCLCPDHLTEELNVTSGKMSCKVAPARTC-YLDC-NHGTCEFDDDFDPHCICQENFYGTY 341
+C CP E L C++A C ++ C N GTC+ + C C + G
Sbjct: 123 SCKCPLGFDESL--------CEIAVPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGER 174
Query: 342 CEKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNGGTC 397
CE N + PC N C ++ C C P +TG C I E N C GGTC
Sbjct: 175 CETKNLCASSPCRNGATCT--ALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPCKYGGTC 232
Query: 398 IAT--TQTCVCPPGFTGDTC----QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ- 450
+ T + C+CP G+TG C + C CQNGG+C + EC CPK + GKNC+
Sbjct: 233 VNTHGSYQCMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSYECKCPKGFEGKNCEQ 292
Query: 451 -YSQCKNY-CVNGECSITD-SGPKCMCSPGYSGKKC----DTC------------TCLNG 491
Y C + C NG I S C C P ++G+ C D C TC N
Sbjct: 293 NYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVCQNGATCTNT 352
Query: 492 DSGPKCMCSPGYSGKKC----DTC---TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVG 544
C+C G++G C D C C G TCI + C+C TG C
Sbjct: 353 HGSYSCICVNGWAGLDCSNNTDDCKQAACFYGATCIDGVGSFYCQCTKGKTGLLCH---- 408
Query: 545 DTSCASLANKCTPNYCSNNGTCVL--IEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNA 602
L + CT N C + C I G +C C Y G C+E D + C++
Sbjct: 409 ------LDDACTSNPCHADAICDTSPINGSYACSCATGYKGVDCSEDIDECDQGSPCEHN 462
Query: 603 GLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICP 660
G+C + G C C G++G C ++ +H C N G+C LD C+C
Sbjct: 463 GIC-VNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSC------LDDPGTFRCVCM 515
Query: 661 RGYAGVRCQTLV 672
G+ G +C+ +
Sbjct: 516 PGFTGTQCEIDI 527
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 184/453 (40%), Gaps = 85/453 (18%)
Query: 296 NVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVN--NSMCPCL 353
N G + VA + T N GTC + +C C ++ G YCE N NSM C
Sbjct: 48 NTVRGTDTALVAASCTSVGCQNGGTCVTQLNGKTYCACDSHYVGDYCEHRNPCNSM-RCQ 106
Query: 354 NQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI---CEN-KCHNGGTCIATT---QTCVC 406
N G C + P C C + + CE + C++ C NGGTC T TC C
Sbjct: 107 NGGTCQVTFRNGRPGISCKCPLGFDESLCEIAVPNACDHVTCLNGGTCQLKTLEEYTCAC 166
Query: 407 PPGFTGDTCQQ---CLNLKCQNGGVC--VNKTTGLECDCPKFYYGKNCQY--SQCK-NYC 458
G+TG+ C+ C + C+NG C + ++ C CP + G C Y +C+ N C
Sbjct: 167 ANGYTGERCETKNLCASSPCRNGATCTALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPC 226
Query: 459 -VNGECSITDSGPKCMCSPGYSGKKCDT-------CTCLNGDS------GPKCMCSPGYS 504
G C T +CMC GY+GK CDT C NG +C C G+
Sbjct: 227 KYGGTCVNTHGSYQCMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSYECKCPKGFE 286
Query: 505 GKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTP 557
GK C D C C NGGTCI + C+CP +TGR C+ V + CA +
Sbjct: 287 GKNCEQNYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTGRFCQDDVDE--CAQRDHP--- 341
Query: 558 NYCSNNGTCVLIEGKPSCKCLPPYSGK-----------------------------QCTE 588
C N TC G SC C+ ++G QCT+
Sbjct: 342 -VCQNGATCTNTHGSYSCICVNGWAGLDCSNNTDDCKQAACFYGATCIDGVGSFYCQCTK 400
Query: 589 REDSPSCH-------NYCDNAGLCSYSK-QGKPVCTCVNGWSGITCSERVSCAHFCFNGG 640
+ CH N C +C S G C+C G+ G+ CSE + C G
Sbjct: 401 GKTGLLCHLDDACTSNPCHADAICDTSPINGSYACSCATGYKGVDCSEDID---ECDQGS 457
Query: 641 TCREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
C ++ C C +G+ G RC+T ++
Sbjct: 458 PCEHNGICVNTPGSYRCNCSQGFTGPRCETNIN 490
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 212/533 (39%), Gaps = 98/533 (18%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCY 271
E K + C C CI+ S +TC CP + T C C
Sbjct: 286 EGKNCEQNYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTGRF-CQDDVDECAQRDHPVCQ 344
Query: 272 LDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAP---ARTC-------YLDCNHGT- 320
N S++C+C + L+ ++ CK A TC Y C G
Sbjct: 345 NGATCTNTHGSYSCICVNGWAG-LDCSNNTDDCKQAACFYGATCIDGVGSFYCQCTKGKT 403
Query: 321 ---CEFDD-------------DFDP-----HCICQENFYGTYC-EKVN--NSMCPCLNQG 356
C DD D P C C + G C E ++ + PC + G
Sbjct: 404 GLLCHLDDACTSNPCHADAICDTSPINGSYACSCATGYKGVDCSEDIDECDQGSPCEHNG 463
Query: 357 MCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNGGTCIATTQT--CVCPPGFT 411
+C + +Y+C+C+ +TG RCE+ I E + C N G+C+ T CVC PGFT
Sbjct: 464 IC----VNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFT 519
Query: 412 GDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYYGK-------NCQYSQCKNYCVN 460
G C+ +C + C N G C +K G +C C + G +CQ C+N
Sbjct: 520 GTQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPCRN---R 576
Query: 461 GECSITDSGPKCMCSPGYSGKKCDT------------CTCLNGDSGPKCMCSPGYSG--- 505
G C + +G C C PGY+G C+ C++ + KC+C PGY+G
Sbjct: 577 GICHDSIAGYSCECPPGYTGTSCEININDCDSNPCHRGKCIDDVNSFKCLCDPGYTGYIC 636
Query: 506 ----KKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCS 561
+C++ C G C + C+C + +G+ CE V N+C N C+
Sbjct: 637 QKQINECESNPCQFDGHCQDRVGSYYCQCQAGTSGKNCEVNV---------NECHSNPCN 687
Query: 562 NNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGW 621
N TC+ C+C+P ++G+ C + D + C N G+C G C C G+
Sbjct: 688 NGATCIDGINSYKCQCVPGFTGQHCEKNVDE-CISSPCANNGVCIDQVNGYK-CECPRGF 745
Query: 622 SGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
C V ++ C N G C + IC CP GY G RC+ +
Sbjct: 746 YDAHCLSDVDECASNPCVNEGRCEDGINEF------ICHCPPGYTGKRCELDI 792
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 213/535 (39%), Gaps = 116/535 (21%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCP------------DHLTEELNVTSGK-------M 260
+ C PC + +CI+ + + C CP D V G+
Sbjct: 716 VDECISSPCANNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRCEDGINEF 775
Query: 261 SCKVAPART---CYLDCNH-GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPA------R 310
C P T C LD + + P H C D L SC+ P
Sbjct: 776 ICHCPPGYTGKRCELDIDECSSNPCQHGGTCYDKLN--------AFSCQCMPGYTGQKCE 827
Query: 311 TCYLDC------NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCL-----NQGMCY 359
T DC N GTC D C+C+ F G CE + M PC N+ C
Sbjct: 828 TNIDDCVTNPCGNGGTC-IDKVNGYKCVCKVPFTGRDCE---SKMDPCASNRCKNEAKCT 883
Query: 360 PDLTHPEPTYKCHCAPSYTGARCESRICE----NKCHNGGTC--IATTQTCVCPPGFTGD 413
P + + C C YTG C+ I E + C NG +C + + C+C G+ G
Sbjct: 884 PSSNFLD--FSCTCKLGYTGRYCDEDIDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGR 941
Query: 414 TC----QQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKNY-CVNGE-CSI 465
C C + CQNGG C++ C C + GK+C+ ++C + C NG CS
Sbjct: 942 DCAINTDDCASFPCQNGGTCLDGIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQ 1001
Query: 466 TDSGPKCMCSPGYSGKKCDT----CT---CLNGDS------GPKCMCSPGYSGK------ 506
+ C C G+SG C T CT CLNG S G C C GYSG
Sbjct: 1002 YVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKL 1061
Query: 507 -KCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGT 565
KCD+ CLNG TC + C CPS +TG++ C+ + C + C N T
Sbjct: 1062 NKCDSNPCLNGATCHEQNNEYTCHCPSGFTGKQ---------CSEYVDWCGQSPCENGAT 1112
Query: 566 CVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYS---------KQGKPVCT 616
C ++ + SCKC ++GK C + + SC + D GL VC
Sbjct: 1113 CSQMKHQFSCKCSAGWTGKLCDVQ--TISCQDAADRKGLSLRQLCNNGTCKDYGNSHVCY 1170
Query: 617 CVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQ 669
C G++G C + + + C NGGTCR+ + + C C +G+ G C+
Sbjct: 1171 CSQGYAGSYCQKEIDECQSQPCQNGGTCRDLIGAYE------CQCRQGFQGQNCE 1219
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 209/548 (38%), Gaps = 114/548 (20%)
Query: 219 VTNHCDDKPCHQSALC-INLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG 277
V N CD C C + +TC C + T E T K C +P R C
Sbjct: 139 VPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGERCET--KNLCASSPCRN-GATCTAL 195
Query: 278 NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENF 337
SS TC CP T + + C+ P C +G + C+C +
Sbjct: 196 AGSSSFTCSCPPGFTGDT-CSYDIEECQSNP-------CKYGGTCVNTHGSYQCMCPTGY 247
Query: 338 YGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCH 392
G C+ S PC N G+C + +Y+C C + G CE + + C
Sbjct: 248 TGKDCDTKYKPCSPSPCQNGGICRSNGL----SYECKCPKGFEGKNCEQNYDDCLGHLCQ 303
Query: 393 NGGTCI--ATTQTCVCPPGFTG-------DTCQQCLNLKCQNGG-----------VCVNK 432
NGGTCI + TC CPP FTG D C Q + CQNG +CVN
Sbjct: 304 NGGTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVCQNGATCTNTHGSYSCICVNG 363
Query: 433 TTGLEC-----DCPKF--YYGKNCQ------YSQC-----------KNYCVNGEC---SI 465
GL+C DC + +YG C Y QC + C + C +I
Sbjct: 364 WAGLDCSNNTDDCKQAACFYGATCIDGVGSFYCQCTKGKTGLLCHLDDACTSNPCHADAI 423
Query: 466 TDSGP-----KCMCSPGYSGKKC----DTC----------TCLNGDSGPKCMCSPGYSGK 506
D+ P C C+ GY G C D C C+N +C CS G++G
Sbjct: 424 CDTSPINGSYACSCATGYKGVDCSEDIDECDQGSPCEHNGICVNTPGSYRCNCSQGFTGP 483
Query: 507 KCDTCT-------CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNY 559
+C+T C N G+C+ + C C +TG +CE + ++C N
Sbjct: 484 RCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQCEIDI---------DECQSNP 534
Query: 560 CSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSKQGKPVCTCV 618
C N+GTC C C ++G +C D C + C N G+C S G C C
Sbjct: 535 CLNDGTCHDKINGFKCSCALGFTGARCQINIDD--CQSQPCRNRGICHDSIAGY-SCECP 591
Query: 619 NGWSGITCSERVS-CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISK 677
G++G +C ++ C + G C + S C+C GY G CQ ++
Sbjct: 592 PGYTGTSCEININDCDSNPCHRGKCIDDVNSFK------CLCDPGYTGYICQKQINECES 645
Query: 678 KQSYVNSH 685
+ H
Sbjct: 646 NPCQFDGH 653
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 179/500 (35%), Gaps = 123/500 (24%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNL 279
T+ C PC C++ ++CLC D + C D N
Sbjct: 947 TDDCASFPCQNGGTCLDGIGDYSCLCVDGFD----------------GKHCETDINE--- 987
Query: 280 PSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYG 339
CL S TC N TC C F G
Sbjct: 988 -----CL----------------SQPCQNGATCSQYVNSYTC----------TCPLGFSG 1016
Query: 340 TYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CE-NKCHN 393
C+ N+ C CLN G C + Y C C Y+GA C+ ++ C+ N C N
Sbjct: 1017 INCQ-TNDEDCTESSCLNGGSCIDGIN----GYNCSCLAGYSGANCQYKLNKCDSNPCLN 1071
Query: 394 GGTCIATTQ--TCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECDCPKFYYGK 447
G TC TC CP GFTG C + C C+NG C C C + GK
Sbjct: 1072 GATCHEQNNEYTCHCPSGFTGKQCSEYVDWCGQSPCENGATCSQMKHQFSCKCSAGWTGK 1131
Query: 448 NC--QYSQCKN-----------YCVNGECSITDSGPKCMCSPGYSGKKC----DTCT--- 487
C Q C++ C NG C + C CS GY+G C D C
Sbjct: 1132 LCDVQTISCQDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEIDECQSQP 1191
Query: 488 CLNGDS------GPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQY 534
C NG + +C C G+ G+ C D C C NGGTC N C CP
Sbjct: 1192 CQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGT 1251
Query: 535 TGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPS 594
G CE D C P C NNG+C+ G C C P + G +C E + +
Sbjct: 1252 MGIICEINKDD---------CKPGACHNNGSCIDRVGGFECVCQPGFVGARC-EGDINEC 1301
Query: 595 CHNYCDNAG-LCSYSKQGKPVCTCVNGWSGITCSERVS-CAHF-CFNGGTC--REQNYSL 649
N C NAG L C C G G C +V CA C NGG C R+ +
Sbjct: 1302 LSNPCSNAGTLDCVQLVNNYHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHH- 1360
Query: 650 DPDLKPICICPRGYAGVRCQ 669
CIC G+ G C+
Sbjct: 1361 -------CICNNGFYGKNCE 1373
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 196/570 (34%), Gaps = 163/570 (28%)
Query: 227 PCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNL----PSS 282
PC A C+N+P S+ CLC C + C +G
Sbjct: 916 PCRNGASCLNVPGSYRCLCTKGYE--------GRDCAINTDDCASFPCQNGGTCLDGIGD 967
Query: 283 HTCLCPD-----HLTEELNVTSGKMSCKVAPARTCYLDCNHGTC-EFDDDFDPHCICQEN 336
++CLC D H ++N C P + N TC ++ + + C C
Sbjct: 968 YSCLCVDGFDGKHCETDIN------ECLSQPCQ------NGATCSQYVNSYT--CTCPLG 1013
Query: 337 FYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CE-NK 390
F G C+ N+ C CLN G C + Y C C Y+GA C+ ++ C+ N
Sbjct: 1014 FSGINCQ-TNDEDCTESSCLNGGSCIDGIN----GYNCSCLAGYSGANCQYKLNKCDSNP 1068
Query: 391 CHNGGTCIATTQ--TCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECDCPKFY 444
C NG TC TC CP GFTG C + C C+NG C C C +
Sbjct: 1069 CLNGATCHEQNNEYTCHCPSGFTGKQCSEYVDWCGQSPCENGATCSQMKHQFSCKCSAGW 1128
Query: 445 YGKNC--QYSQCKN-----------YCVNGECSITDSGPKCMCSPGYSGKKC----DTCT 487
GK C Q C++ C NG C + C CS GY+G C D C
Sbjct: 1129 TGKLCDVQTISCQDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEIDECQ 1188
Query: 488 ---CLNGDS------GPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCP 531
C NG + +C C G+ G+ C D C C NGGTC N C CP
Sbjct: 1189 SQPCQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCP 1248
Query: 532 SQYTGRRCECAVGD-----------------------------TSCASLANKCTPNYCSN 562
G CE D C N+C N CSN
Sbjct: 1249 PGTMGIICEINKDDCKPGACHNNGSCIDRVGGFECVCQPGFVGARCEGDINECLSNPCSN 1308
Query: 563 NGT--CVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNG 620
GT CV + C C P + G+ C + D + + C N G C+ + G C C NG
Sbjct: 1309 AGTLDCVQLVNNYHCNCRPGHMGRHCEHKVDFCA-QSPCQNGGNCNIRQSGHH-CICNNG 1366
Query: 621 WSGITCS------------------------ERVSCAHF------------------CFN 638
+ G C R C C
Sbjct: 1367 FYGKNCELSGQDCDSNPCRVGNCVVADEGFGYRCECPRGTLGEHCEIDTLDECSPNPCAQ 1426
Query: 639 GGTCREQNYSLDPDLKPICICPRGYAGVRC 668
G C + L D + C+CP + G RC
Sbjct: 1427 GAACED----LLGDYE--CLCPSKWKGKRC 1450
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 186/485 (38%), Gaps = 76/485 (15%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCY 271
+ K N C +PC A C +S+TC CP + +N + C + +C
Sbjct: 977 DGKHCETDINECLSQPCQNGATCSQYVNSYTCTCPLGFS-GINCQTNDEDCTES---SCL 1032
Query: 272 LDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHC 331
+ + + + C C L SG +C+ + C +G + + + C
Sbjct: 1033 NGGSCIDGINGYNCSC-------LAGYSG-ANCQYKLNKCDSNPCLNGATCHEQNNEYTC 1084
Query: 332 ICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--C 387
C F G C + + PC N C + + + C C+ +TG C+ + C
Sbjct: 1085 HCPSGFTGKQCSEYVDWCGQSPCENGATC----SQMKHQFSCKCSAGWTGKLCDVQTISC 1140
Query: 388 ENKCH----------NGGTC--IATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVN 431
++ N GTC + C C G+ G CQ +C + CQNGG C +
Sbjct: 1141 QDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEIDECQSQPCQNGGTCRD 1200
Query: 432 KTTGLECDCPKFYYGKNCQYSQ---CKNYCVN-GECSITDSGPKCMCSPGYSGKKCDTCT 487
EC C + + G+NC+ + N C N G C C C PG G C+
Sbjct: 1201 LIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICE--- 1257
Query: 488 CLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTS 547
+N D C PG C N G+CI C C + G RCE GD
Sbjct: 1258 -INKDD-----CKPG---------ACHNNGSCIDRVGGFECVCQPGFVGARCE---GDI- 1298
Query: 548 CASLANKCTPNYCSNNGT--CVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLC 605
N+C N CSN GT CV + C C P + G+ C + D + + C N G C
Sbjct: 1299 -----NECLSNPCSNAGTLDCVQLVNNYHCNCRPGHMGRHCEHKVDFCA-QSPCQNGGNC 1352
Query: 606 SYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQN-YSLDPDLKPICICPRGYA 664
+ + G C C NG+ G C C + CR N D C CPRG
Sbjct: 1353 NIRQSGHH-CICNNGFYGKNCELS---GQDC-DSNPCRVGNCVVADEGFGYRCECPRGTL 1407
Query: 665 GVRCQ 669
G C+
Sbjct: 1408 GEHCE 1412
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 149/390 (38%), Gaps = 94/390 (24%)
Query: 214 KQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPAR---TC 270
KQ + C PC A C + +C C T +L +SC+ A R +
Sbjct: 1093 KQCSEYVDWCGQSPCENGATCSQMKHQFSCKCSAGWTGKL-CDVQTISCQDAADRKGLSL 1151
Query: 271 YLDCNHG---NLPSSHTCLCPD-----HLTEELNVTSGKMSCKVAPARTCYLDCNHGTCE 322
CN+G + +SH C C + +E++ C+ P + N GTC
Sbjct: 1152 RQLCNNGTCKDYGNSHVCYCSQGYAGSYCQKEID------ECQSQPCQ------NGGTCR 1199
Query: 323 FDDDFDPHCICQENFYGTYCE-------------------KVNNSMCPC----------L 353
D C C++ F G CE +V N C C +
Sbjct: 1200 -DLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICEI 1258
Query: 354 NQGMCYPDLTHPEPT-------YKCHCAPSYTGARCESRICE---NKCHNGGTC----IA 399
N+ C P H + ++C C P + GARCE I E N C N GT +
Sbjct: 1259 NKDDCKPGACHNNGSCIDRVGGFECVCQPGFVGARCEGDINECLSNPCSNAGTLDCVQLV 1318
Query: 400 TTQTCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYS--Q 453
C C PG G C+ C CQNGG C + +G C C +YGKNC+ S
Sbjct: 1319 NNYHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQSGHHCICNNGFYGKNCELSGQD 1378
Query: 454 C-KNYCVNGECSITDS--GPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDT 510
C N C G C + D G +C C G G+ C+ D+ +C +P
Sbjct: 1379 CDSNPCRVGNCVVADEGFGYRCECPRGTLGEHCEI------DTLDECSPNP--------- 1423
Query: 511 CTCLNGGTCIPNSKNNVCKCPSQYTGRRCE 540
C G C + C CPS++ G+RC+
Sbjct: 1424 --CAQGAACEDLLGDYECLCPSKWKGKRCD 1451
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus
GN=Notch2 PE=1 SV=1
Length = 2471
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 216/523 (41%), Gaps = 86/523 (16%)
Query: 198 ANNLNRASDVLILQENKQAHNV-TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVT 256
+ +NR S V Q N+ + C PC + A CIN + C+CP+ +
Sbjct: 660 VDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKDATCINDVNGFRCMCPEG-PHHPSCY 718
Query: 257 SGKMSCKVAPARTCYLDCNHGNLP---SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCY 313
S C +P C HGN S + CLC D +N K C P +
Sbjct: 719 SQVNECLSSP-------CIHGNCTGGLSGYKCLC-DAGWVGINCEVDKNECLSNPCQ--- 767
Query: 314 LDCNHGTC-EFDDDFDPHCICQENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTY 369
N GTC + + C C++ F G C+ VN C PCLNQG C D++ Y
Sbjct: 768 ---NGGTCNNLVNGY--RCTCKKGFKGYNCQ-VNIDECASNPCLNQGTCLDDVS----GY 817
Query: 370 KCHCAPSYTGARCESRIC---ENKCHNGGTCIATTQ----TCVCPPGFTGDTC----QQC 418
CHC YTG C++ + N C N C TC+C PG+ G C +C
Sbjct: 818 TCHCMLPYTGKNCQTVLAPCSPNPCENAAVCKEAPNFESFTCLCAPGWQGQRCTVDVDEC 877
Query: 419 LNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQC-KNYCVN-GECSITDSGPKCMC 474
++ C N G+C N C+CP + G +C+ + C N C N G C + C+C
Sbjct: 878 VSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCLC 937
Query: 475 SPGYSGKKCDT-------------CTCLNGDSGPKCMCSPGYSGKKC----DTCT---CL 514
PG+ G KC T TC + + C C G+ G C D CT C
Sbjct: 938 LPGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCF 997
Query: 515 NGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPS 574
NGGTC+ + C CP +TG C + N+C+ N C N+GTCV G
Sbjct: 998 NGGTCVDGINSFSCLCPVGFTGPFCLHDI---------NECSSNPCLNSGTCVDGLGTYR 1048
Query: 575 CKCLPPYSGKQCTERED--SPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSE-RVS 631
C C Y+GK C + SPS C N G C+ K +P C C GW G C VS
Sbjct: 1049 CTCPLGYTGKNCQTLVNLCSPS---PCKNKGTCAQEK-ARPRCLCPPGWDGAYCDVLNVS 1104
Query: 632 CAHFCFNGGT-----CREQNYSLDPDLKPICICPRGYAGVRCQ 669
C G C+ ++ C CP GY G C+
Sbjct: 1105 CKAAALQKGVPVEHLCQHSGICINAGNTHHCQCPLGYTGSYCE 1147
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 197/503 (39%), Gaps = 89/503 (17%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG-- 277
T+ C PC + C ++ + +C CP +T + + C + P R C HG
Sbjct: 145 TDVCLSHPCENGSTCSSVANQFSCRCPAGITGQ-KCDADINECDI-PGR-----CQHGGT 197
Query: 278 --NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQE 335
NLP S+ C CP T + + S + C +P N GTC DF C C
Sbjct: 198 CLNLPGSYRCQCPQRFTGQ-HCDSPYVPCAPSPC------VNGGTCRQTGDFTSECHCLP 250
Query: 336 NFYGTYCEKVNNSMCP---CLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---- 388
F G+ CE+ N CP C N G+C + TY C C P +TG C + E
Sbjct: 251 GFEGSNCER-NIDDCPNHKCQNGGVCVDGVN----TYNCRCPPQWTGQFCTEDVDECLLQ 305
Query: 389 -NKCHNGGTCIATTQ--TCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECDCP 441
N C NGGTC CVC G++GD C + C C G C+++ C CP
Sbjct: 306 PNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCLCP 365
Query: 442 KFYYGKNCQYSQCKNYCVNGEC---SITDSGPK-----CMCSPGYSGKKC----DTCT-- 487
+ G C + C++ C ++ D+ P C C Y G C D C
Sbjct: 366 EGKAGLLCHL---DDACISNPCHKGALCDTNPLNGQYICTCPQAYKGADCTEDVDECAMA 422
Query: 488 ----------CLNGDSGPKCMCSPGYSGKKCD-------TCTCLNGGTCIPNSKNNVCKC 530
C+N D C C GY+G +C+ + C N TC+ C C
Sbjct: 423 NSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLC 482
Query: 531 PSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTERE 590
+ G CE V N+C N C NNG CV + C C P ++G C
Sbjct: 483 MPGFKGVHCELEV---------NECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDI 533
Query: 591 DSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHFCFNGGTCREQNYSL 649
D S C N C G C C G++G C E + +C + G C++ S
Sbjct: 534 DDCS-STPCLNGAKCIDHPNGY-ECQCATGFTGTLCDENIDNCDPDPCHHGQCQDGIDSY 591
Query: 650 DPDLKPICICPRGYAGVRCQTLV 672
CIC GY G C +
Sbjct: 592 ------TCICNPGYMGAICSDQI 608
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 196/528 (37%), Gaps = 165/528 (31%)
Query: 317 NHGTCEFDDDFDPH-CICQENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCH 372
N C+ +F+ C+C + G C V+ C PC+N G+C+ + + +Y C
Sbjct: 844 NAAVCKEAPNFESFTCLCAPGWQGQRC-TVDVDECVSKPCMNNGICH----NTQGSYMCE 898
Query: 373 CAPSYTGARCESRICE---NKCHNGGTCI--ATTQTCVCPPGFTGDTCQ----QCLNLKC 423
C P ++G CE I + N C NGG+C+ T +C+C PGF GD CQ +CL+ C
Sbjct: 899 CPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDMNECLSEPC 958
Query: 424 QNGGVCVNKTTGLECDCPKFYYGKNCQ-------YSQCKN--YCVNG------ECSITDS 468
+NGG C + C CP ++G +C+ S C N CV+G C + +
Sbjct: 959 KNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPVGFT 1018
Query: 469 GP---------------------------KCMCSPGYSGKKCDTC-------------TC 488
GP +C C GY+GK C T TC
Sbjct: 1019 GPFCLHDINECSSNPCLNSGTCVDGLGTYRCTCPLGYTGKNCQTLVNLCSPSPCKNKGTC 1078
Query: 489 LNGDSGPKCMCSPGYSGKKCDTCT-----------------CLNGGTCIPNSKNNVCKCP 531
+ P+C+C PG+ G CD C + G CI + C+CP
Sbjct: 1079 AQEKARPRCLCPPGWDGAYCDVLNVSCKAAALQKGVPVEHLCQHSGICINAGNTHHCQCP 1138
Query: 532 SQYTGR---------------------------RCECAVG--DTSCASLANKCTPNYCSN 562
YTG RCEC G +C ++C C N
Sbjct: 1139 LGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQN 1198
Query: 563 NGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWS 622
GTC+ + C C P G C E D + +C N G C + G C C+ G++
Sbjct: 1199 GGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQC-VDRIGGYSCRCLPGFA 1257
Query: 623 GITCSERVS----------------------------------CAHF--------CFNGG 640
G C ++ C F C NGG
Sbjct: 1258 GERCEGDINECLSNPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGG 1317
Query: 641 TCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKKQSYVNSHISS 688
TC + D IC CP G++G RCQ+ + ++ H +S
Sbjct: 1318 TCAVASNVPD---GFICRCPPGFSGARCQSSCGQVKCRRGEQCVHTAS 1362
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 157/376 (41%), Gaps = 61/376 (16%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAP 375
N GTC + +C C E F G YC+ + C N G C + T C CAP
Sbjct: 37 NEGTCVTYHNGTGYCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVTQAMLGKAT--CRCAP 94
Query: 376 SYTGARCE---SRIC--ENKCHNGGTCIA---TTQTCVCPPGFTGDTCQQ---CLNLKCQ 424
+TG C+ S C C NGGTC T C C GFTG CQ CL+ C+
Sbjct: 95 GFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWDTYECTCQVGFTGKQCQWTDVCLSHPCE 154
Query: 425 NGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCD 484
NG C + C CP G+ C +N EC I G+
Sbjct: 155 NGSTCSSVANQFSCRCPAGITGQKCDAD------IN-ECDI-------------PGRCQH 194
Query: 485 TCTCLNGDSGPKCMCSPGYSGKKCDT-------CTCLNGGTCIPNSK-NNVCKCPSQYTG 536
TCLN +C C ++G+ CD+ C+NGGTC + C C + G
Sbjct: 195 GGTCLNLPGSYRCQCPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGDFTSECHCLPGFEG 254
Query: 537 RRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCH 596
CE + D C + C N G CV +C+C P ++G+ CTE D
Sbjct: 255 SNCERNIDD---------CPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQ 305
Query: 597 -NYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHF--CFNGGTCREQNYSLDPDL 653
N C N G C+ ++ G C CVNGWSG CSE + F C G TC ++ S
Sbjct: 306 PNACQNGGTCT-NRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFS--- 361
Query: 654 KPICICPRGYAGVRCQ 669
C+CP G AG+ C
Sbjct: 362 ---CLCPEGKAGLLCH 374
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 178/412 (43%), Gaps = 83/412 (20%)
Query: 330 HCICQENFYGTYCE-KVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI- 386
C+C F G C+ +++ S PCLN C + HP Y+C CA +TG C+ I
Sbjct: 517 QCLCPPGFTGPVCQIDIDDCSSTPCLNGAKC---IDHPN-GYECQCATGFTGTLCDENID 572
Query: 387 -CE-NKCHNGGTCIAT-TQTCVCPPGFTGDTC----QQCLNLKCQNGGVCVNKTTGLECD 439
C+ + CH+G + TC+C PG+ G C +C + C N G C++ G +C+
Sbjct: 573 NCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCN 632
Query: 440 CPKFYYGKNCQ--YSQC-KNYCVNGECSITDSGPKCMCSPGYSGKKC----DTC------ 486
C G NC+ + C N C++G C + C+CSPG++G++C D C
Sbjct: 633 CQPGTSGLNCEINFDDCASNPCLHGACVDGINRYSCVCSPGFTGQRCNIDIDECASNPCR 692
Query: 487 ---TCLN-------------------------------------GDSGPKCMCSPGYSGK 506
TC+N G SG KC+C G+ G
Sbjct: 693 KDATCINDVNGFRCMCPEGPHHPSCYSQVNECLSSPCIHGNCTGGLSGYKCLCDAGWVGI 752
Query: 507 KCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVG--DTSCASLANKCTPNYCSNNG 564
C+ ++ C+ N N C + G RC C G +C ++C N C N G
Sbjct: 753 NCE----VDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQG 808
Query: 565 TCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKP-VCTCVNGWSG 623
TC+ +C C+ PY+GK C + +P N C+NA +C + + C C GW G
Sbjct: 809 TCLDDVSGYTCHCMLPYTGKNC-QTVLAPCSPNPCENAAVCKEAPNFESFTCLCAPGWQG 867
Query: 624 ITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
C+ V + C N G C S +C CP G++G+ C+ ++
Sbjct: 868 QRCTVDVDECVSKPCMNNGICHNTQGSY------MCECPPGFSGMDCEEDIN 913
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 179/442 (40%), Gaps = 87/442 (19%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAP---ARTCYLD 273
N + C + C C++ +S +CLCP T + C P + TC
Sbjct: 985 ENNIDECTESSCFNGGTCVDGINSFSCLCPVGFTGPFCLHDIN-ECSSNPCLNSGTCV-- 1041
Query: 274 CNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCIC 333
+ ++ C CP T + N + C +P + N GTC + P C+C
Sbjct: 1042 ----DGLGTYRCTCPLGYTGK-NCQTLVNLCSPSPCK------NKGTCA-QEKARPRCLC 1089
Query: 334 QENFYGTYCEKVNNS-MCPCLNQGMCYPDL-------THPEPTYKCHCAPSYTGARCESR 385
+ G YC+ +N S L +G+ L + T+ C C YTG+ CE +
Sbjct: 1090 PPGWDGAYCDVLNVSCKAAALQKGVPVEHLCQHSGICINAGNTHHCQCPLGYTGSYCEEQ 1149
Query: 386 ICE---NKCHNGGTC--IATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGL 436
+ E N C +G TC C C PG+ G C+ +C N CQNGG C++
Sbjct: 1150 LDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHF 1209
Query: 437 ECDCPKFYYGKNCQ--YSQCKN--YCVNG-ECSITDSGPKCMCSPGYSGKKCD------- 484
+C CP G C+ C +C+NG +C G C C PG++G++C+
Sbjct: 1210 KCSCPPGTRGLLCEENIDDCAGAPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECL 1269
Query: 485 --------TCTCLNGDSGPKCMCSPGYSGKKCDTCT-------CLNGGTCIPNS---KNN 526
+ C+ + +C+C ++G+ C+T CLNGGTC S
Sbjct: 1270 SNPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNVPDGF 1329
Query: 527 VCKCPSQYTGRRCECAVGDTSC--------------------ASLANKCTPNYCSNNGTC 566
+C+CP ++G RC+ + G C + C N C + GTC
Sbjct: 1330 ICRCPPGFSGARCQSSCGQVKCRRGEQCVHTASGPHCFCPNHKDCESGCASNPCQHGGTC 1389
Query: 567 VLIEGKP--SCKCLPPYSGKQC 586
P SC+C PP+ G C
Sbjct: 1390 YPQRQPPYYSCRCSPPFWGSHC 1411
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 209/559 (37%), Gaps = 131/559 (23%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLP 280
+ C + C +C++ +++ C CP T + T C + P C N
Sbjct: 262 DDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQF-CTEDVDECLLQP-NACQNGGTCTNRN 319
Query: 281 SSHTCLCPDHLTEELNVTSGKMSCKVA---PARTCYLD-------CNHGT----CEFDD- 325
+ C+C + + + + + C A P TC C G C DD
Sbjct: 320 GGYGCVCVNGWSGD-DCSENIDDCAFASCTPGSTCIDRVASFSCLCPEGKAGLLCHLDDA 378
Query: 326 ------------DFDPH-----CICQENFYGTYC-EKVNNSMC----PCLNQGMCYPDLT 363
D +P C C + + G C E V+ PC + G C
Sbjct: 379 CISNPCHKGALCDTNPLNGQYICTCPQAYKGADCTEDVDECAMANSNPCEHAGKC----V 434
Query: 364 HPEPTYKCHCAPSYTGARCESRICE---NKCHNGGTCIATTQ--TCVCPPGFTGDTCQ-- 416
+ + + C C Y G RCE I E + C N TC+ TC+C PGF G C+
Sbjct: 435 NTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELE 494
Query: 417 --QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKNY-CVNG-ECSITDSGP 470
+C + C N G CV+K +C CP + G CQ C + C+NG +C +G
Sbjct: 495 VNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGY 554
Query: 471 KCMCSPGYSGKKCDT------------CTCLNGDSGPKCMCSPGYSGKKC----DTC--- 511
+C C+ G++G CD C +G C+C+PGY G C D C
Sbjct: 555 ECQCATGFTGTLCDENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSS 614
Query: 512 TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG 571
CLN G CI C C +G CE D CAS N C +G CV
Sbjct: 615 PCLNDGRCIDLVNGYQCNCQPGTSGLNCEINFDD--CAS--NPCL------HGACVDGIN 664
Query: 572 KPSCKCLPPYSGKQCT-----------------------------EREDSPSCHNYCDN- 601
+ SC C P ++G++C E PSC++ +
Sbjct: 665 RYSCVCSPGFTGQRCNIDIDECASNPCRKDATCINDVNGFRCMCPEGPHHPSCYSQVNEC 724
Query: 602 ------AGLCSYSKQGKPVCTCVNGWSGITCS-ERVSC-AHFCFNGGTCREQNYSLDPDL 653
G C+ G C C GW GI C ++ C ++ C NGGTC
Sbjct: 725 LSSPCIHGNCTGGLSGY-KCLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVNGYR--- 780
Query: 654 KPICICPRGYAGVRCQTLV 672
C C +G+ G CQ +
Sbjct: 781 ---CTCKKGFKGYNCQVNI 796
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 330 HCICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRIC 387
C+C+ F G +CE + PCLN G C P+ + C C P ++GARC+S
Sbjct: 1289 QCVCRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNVPD-GFICRCPPGFSGARCQSSCG 1347
Query: 388 ENKCHNGGTCIATTQT--CVCPPGFTGDTCQQCLNLKCQNGGVCVNKTTG--LECDCPKF 443
+ KC G C+ T C CP D C + CQ+GG C + C C
Sbjct: 1348 QVKCRRGEQCVHTASGPHCFCP--NHKDCESGCASNPCQHGGTCYPQRQPPYYSCRCSPP 1405
Query: 444 YYGKNCQ 450
++G +C+
Sbjct: 1406 FWGSHCE 1412
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 71/196 (36%), Gaps = 48/196 (24%)
Query: 513 CLNGGTCIP-NSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCV--LI 569
C+N GTC+ ++ C+CP + G C+ + C N C N GTCV +
Sbjct: 35 CVNEGTCVTYHNGTGYCRCPEGFLGEYCQ----------HRDPCEKNRCQNGGTCVTQAM 84
Query: 570 EGKPSCKCLPPYSGKQCTEREDSP-SCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSE 628
GK +C+C P ++G+ C P C N G C CTC G++G C
Sbjct: 85 LGKATCRCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWDTYECTCQVGFTGKQCQW 144
Query: 629 RVSC-AHFCFNGGTCREQNYSL-------------DPDLKPI------------------ 656
C +H C NG TC D D+
Sbjct: 145 TDVCLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINECDIPGRCQHGGTCLNLPGS 204
Query: 657 --CICPRGYAGVRCQT 670
C CP+ + G C +
Sbjct: 205 YRCQCPQRFTGQHCDS 220
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 207/508 (40%), Gaps = 97/508 (19%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG--- 277
N CD PC C + + TC+CPD + + S C P C HG
Sbjct: 679 NECDSNPCRNGGTCKDQINGFTCVCPDGYHDHM-CLSEVNECNSNP-------CIHGACH 730
Query: 278 NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENF 337
+ + + C C + N C+ P N GTC+ D C C+ F
Sbjct: 731 DGVNGYKCDCEAGWSGS-NCDINNNECESNPCM------NGGTCK-DMTGAYICTCKAGF 782
Query: 338 YGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCH 392
G C+ N S PCLN G C D+ YKC+C YTGA CE+ + + C
Sbjct: 783 SGPNCQTNINECSSNPCLNHGTCIDDVA----GYKCNCMLPYTGAICEAVLAPCAGSPCK 838
Query: 393 NGGTCIAT----TQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFY 444
NGG C + T +C CPPG+ G TC+ +C+N C+NG C N +C+C Y
Sbjct: 839 NGGRCKESEDFETFSCECPPGWQGQTCEIDMNECVNRPCRNGATCQNTNGSYKCNCKPGY 898
Query: 445 YGKNCQYS--QCK-NYCVNG-ECSITDSGPKCMCSPGYSGKKCD-------TCTCLNGDS 493
G+NC+ C+ N C NG CS + C C G+ G KC+ + C NG +
Sbjct: 899 TGRNCEMDIDDCQPNPCHNGGSCSDGINMFFCNCPAGFRGPKCEEDINECASNPCKNGAN 958
Query: 494 GPKCM------CSPGYSGKKCDTCT-------CLNGGTCIPNSKNNVCKCPSQYTGRRCE 540
C+ C PG+SG C++ T C NGGTCI C+CP +TG C+
Sbjct: 959 CTDCVNSYTCTCQPGFSGIHCESNTPDCTESSCFNGGTCIDGINTFTCQCPPGFTGSYCQ 1018
Query: 541 CAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER----EDSPSCH 596
+ N+C C N GTC G C C Y+G C + SP
Sbjct: 1019 HDI---------NECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSP--- 1066
Query: 597 NYCDNAGLCSYSKQGKPVCTCVNGWSGITC------------SERVSCAHFCFNGGTCRE 644
C N G C + C C +GW+G+ C + V H C N G C
Sbjct: 1067 --CKNGGKC-WQTNNFYRCECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMC-- 1121
Query: 645 QNYSLDPDLKPICICPRGYAGVRCQTLV 672
+D C C GY G C+ V
Sbjct: 1122 ----VDTGNTHFCRCQAGYTGSYCEEQV 1145
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 175/395 (44%), Gaps = 52/395 (13%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCP--CLNQGMCYPDLTHPEPTYKCHCA 374
N G CE C+C ++G C+ N C+N G C P L + CHC
Sbjct: 31 NGGRCEMTPGGTGVCLCGNLYFGERCQFPNPCTIKNQCMNFGTCEPVLQGNAIDFICHCP 90
Query: 375 PSYTGARCESRI----CENKCHNGGTC----IATTQTCVCPPGFTGDTCQQ---CLNLKC 423
+T C + + N C NGGTC T C CPPG+TGD+CQQ C + C
Sbjct: 91 VGFTDKVCLTPVDNACVNNPCRNGGTCELLNSVTEYKCRCPPGWTGDSCQQADPCASNPC 150
Query: 424 QNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQC-KNYCVNGECSITDSGP-KCMCSPGYS 479
NGG C+ C CP ++G C+ ++C +N C NG I + G +C C ++
Sbjct: 151 ANGGKCLPFEIQYICKCPPGFHGATCKQDINECSQNPCKNGGQCINEFGSYRCTCQNRFT 210
Query: 480 GKKCDT-------CTCLNG-------DSGPKCMCSPGYSGKKC----DTC---TCLNGGT 518
G+ CD CLNG D+ C C PG+SG+ C D C C NGGT
Sbjct: 211 GRNCDEPYVPCNPSPCLNGGTCRQTDDTSYDCTCLPGFSGQNCEENIDDCPSNNCRNGGT 270
Query: 519 CIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCL 578
C+ C+CP +TG+ C V + + PN C N GTC G +C C+
Sbjct: 271 CVDGVNTYNCQCPPDWTGQYCTEDVDEC-------QLMPNACQNGGTCHNTYGGYNCVCV 323
Query: 579 PPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSC-AHFCF 637
++G+ C+E D C N ++G + + C C +G +G+ C +C ++ C
Sbjct: 324 NGWTGEDCSENID--DCANAACHSGATCHDRVASFYCECPHGRTGLLCHLDNACISNPCN 381
Query: 638 NGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
G C + K IC CP GY G C V
Sbjct: 382 EGSNCDTNPV----NGKAICTCPPGYTGPACNNDV 412
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 160/372 (43%), Gaps = 62/372 (16%)
Query: 331 CICQENFYGTYCEKVNNSMC--PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI-- 386
C C F G CE+ N PC N C T +Y C C P ++G CES
Sbjct: 930 CNCPAGFRGPKCEEDINECASNPCKNGANC----TDCVNSYTCTCQPGFSGIHCESNTPD 985
Query: 387 -CENKCHNGGTCI--ATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECD 439
E+ C NGGTCI T TC CPPGFTG CQ +C + C NGG C + +C
Sbjct: 986 CTESSCFNGGTCIDGINTFTCQCPPGFTGSYCQHDINECDSKPCLNGGTCQDSYGTYKCT 1045
Query: 440 CPKFYYGKNCQ-------YSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGD 492
CP+ Y G NCQ S CKN G+C T++ +C C G++G CD
Sbjct: 1046 CPQGYTGLNCQNLVRWCDSSPCKN---GGKCWQTNNFYRCECKSGWTGVYCDV------- 1095
Query: 493 SGPKCMCSPGYSGKKCDTC-TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASL 551
P C + D C N G C+ + C+C + YTG CE V
Sbjct: 1096 --PSVSCEVAAKQQGVDIVHLCRNSGMCVDTGNTHFCRCQAGYTGSYCEEQV-------- 1145
Query: 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQG 611
++C+PN C N TC G SC+C+ Y G C+E + H C N G C
Sbjct: 1146 -DECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSH-PCQNGGTC-IDLIN 1202
Query: 612 KPVCTCVNGWSGITCSERV-SCAHF---------CFNGGTCREQNYSLDPDLKPICICPR 661
C+C G G+ C V C F CFN G C ++ + CICP
Sbjct: 1203 TYKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKCIDRVGGYN------CICPP 1256
Query: 662 GYAGVRCQTLVH 673
G+ G RC+ V+
Sbjct: 1257 GFVGERCEGDVN 1268
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 201/468 (42%), Gaps = 67/468 (14%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLP 280
+ C PC + CI+ + C CP + L C P + C G P
Sbjct: 491 DECASNPCLHNGKCIDKINEFRCDCPTGFSGNL-CQHDFDECTSTPCKN-GAKCLDG--P 546
Query: 281 SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGT 340
+S+TC C + T + C P C++GTC+ D C+C+ + G
Sbjct: 547 NSYTCQCTEGFTGR-HCEQDINECIPDP-------CHYGTCK-DGIATFTCLCRPGYTGR 597
Query: 341 YCE-KVNNSMC-PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CENKCHNGGT 396
C+ +N + PCLN G C T E Y C C TG CE++I C + + G
Sbjct: 598 LCDNDINECLSKPCLNGGQC----TDRENGYICTCPKGTTGVNCETKIDDCASNLCDNGK 653
Query: 397 CIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNC- 449
CI C C PG+TG C +C + C+NGG C ++ G C CP Y+ C
Sbjct: 654 CIDKIDGYECTCEPGYTGKLCNININECDSNPCRNGGTCKDQINGFTCVCPDGYHDHMCL 713
Query: 450 -QYSQC-KNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKK 507
+ ++C N C++G C +G KC C G+SG CD + +
Sbjct: 714 SEVNECNSNPCIHGACHDGVNGYKCDCEAGWSGSNCDI------------------NNNE 755
Query: 508 CDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCV 567
C++ C+NGGTC + +C C + ++G C+ + N+C+ N C N+GTC+
Sbjct: 756 CESNPCMNGGTCKDMTGAYICTCKAGFSGPNCQTNI---------NECSSNPCLNHGTCI 806
Query: 568 LIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPV-CTCVNGWSGITC 626
C C+ PY+G C E +P + C N G C S+ + C C GW G TC
Sbjct: 807 DDVAGYKCNCMLPYTGAIC-EAVLAPCAGSPCKNGGRCKESEDFETFSCECPPGWQGQTC 865
Query: 627 S-ERVSCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
+ C + C NG TC+ N S C C GY G C+ +
Sbjct: 866 EIDMNECVNRPCRNGATCQNTNGSYK------CNCKPGYTGRNCEMDI 907
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 211/504 (41%), Gaps = 90/504 (17%)
Query: 218 NVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG 277
N N C KPC C + + + C CP T ++C+ C++G
Sbjct: 601 NDINECLSKPCLNGGQCTDRENGYICTCPKGTT--------GVNCETKIDDCASNLCDNG 652
Query: 278 ---NLPSSHTCLCPDHLTEEL-NVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCIC 333
+ + C C T +L N+ + C P R N GTC+ D C+C
Sbjct: 653 KCIDKIDGYECTCEPGYTGKLCNININE--CDSNPCR------NGGTCK-DQINGFTCVC 703
Query: 334 QENFYGTYC-EKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCE--SRICE- 388
+ ++ C +VN + PC+ G C+ + YKC C ++G+ C+ + CE
Sbjct: 704 PDGYHDHMCLSEVNECNSNPCI-HGACHDGVN----GYKCDCEAGWSGSNCDINNNECES 758
Query: 389 NKCHNGGTCIATTQT--CVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPK 442
N C NGGTC T C C GF+G CQ +C + C N G C++ G +C+C
Sbjct: 759 NPCMNGGTCKDMTGAYICTCKAGFSGPNCQTNINECSSNPCLNHGTCIDDVAGYKCNCML 818
Query: 443 FYYGKNCQY-------SQCKNYCVNGECSITDSGP--KCMCSPGYSGKKCDT-------- 485
Y G C+ S CKN G C ++ C C PG+ G+ C+
Sbjct: 819 PYTGAICEAVLAPCAGSPCKN---GGRCKESEDFETFSCECPPGWQGQTCEIDMNECVNR 875
Query: 486 -----CTCLNGDSGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQ 533
TC N + KC C PGY+G+ C D C C NGG+C C CP+
Sbjct: 876 PCRNGATCQNTNGSYKCNCKPGYTGRNCEMDIDDCQPNPCHNGGSCSDGINMFFCNCPAG 935
Query: 534 YTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSP 593
+ G +CE + N+C N C N C +C C P +SG C ++P
Sbjct: 936 FRGPKCEEDI---------NECASNPCKNGANCTDCVNSYTCTCQPGFSGIHC--ESNTP 984
Query: 594 SC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLD 650
C + C N G C C C G++G C ++ + C NGGTC++ +
Sbjct: 985 DCTESSCFNGGTC-IDGINTFTCQCPPGFTGSYCQHDINECDSKPCLNGGTCQDSYGTYK 1043
Query: 651 PDLKPICICPRGYAGVRCQTLVHY 674
C CP+GY G+ CQ LV +
Sbjct: 1044 ------CTCPQGYTGLNCQNLVRW 1061
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 183/480 (38%), Gaps = 86/480 (17%)
Query: 223 CDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG----N 278
C PC C+ + C CP +CK C +G N
Sbjct: 145 CASNPCANGGKCLPFEIQYICKCPPGFH--------GATCKQDINECSQNPCKNGGQCIN 196
Query: 279 LPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFY 338
S+ C C + T N + C +P N GTC DD C C F
Sbjct: 197 EFGSYRCTCQNRFTGR-NCDEPYVPCNPSPCL------NGGTCRQTDDTSYDCTCLPGFS 249
Query: 339 GTYCEKVNNSMCP---CLNQGMCYPDLTHPEPTYKCHCAPSYTGARC-----ESRICENK 390
G CE+ N CP C N G C + TY C C P +TG C E ++ N
Sbjct: 250 GQNCEE-NIDDCPSNNCRNGGTCVDGVN----TYNCQCPPDWTGQYCTEDVDECQLMPNA 304
Query: 391 CHNGGTCIAT--TQTCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECDCPKFY 444
C NGGTC T CVC G+TG+ C + C N C +G C ++ C+CP
Sbjct: 305 CQNGGTCHNTYGGYNCVCVNGWTGEDCSENIDDCANAACHSGATCHDRVASFYCECPHGR 364
Query: 445 YGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYS 504
G C N C++ C+ G CDT +NG + C C PGY+
Sbjct: 365 TGLLCHLD---NACISNPCN--------------EGSNCDT-NPVNGKA--ICTCPPGYT 404
Query: 505 GKKC----DTCT-----CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKC 555
G C D C+ C +GG C + C CP Y G RCE V N+C
Sbjct: 405 GPACNNDVDECSLGANPCEHGGRCTNTLGSFQCNCPQGYAGPRCEIDV---------NEC 455
Query: 556 TPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVC 615
N C N+ TC+ G+ C C+P Y G C D + N C + G C K + C
Sbjct: 456 LSNPCQNDSTCLDQIGEFQCICMPGYEGLYCETNIDECA-SNPCLHNGKC-IDKINEFRC 513
Query: 616 TCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
C G+SG C + C NG C LD C C G+ G C+ ++
Sbjct: 514 DCPTGFSGNLCQHDFDECTSTPCKNGAKC------LDGPNSYTCQCTEGFTGRHCEQDIN 567
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 165/397 (41%), Gaps = 93/397 (23%)
Query: 351 PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNGGTCIATTQ--TCV 405
PC + G C T+ +++C+C Y G RCE + E N C N TC+ C+
Sbjct: 421 PCEHGGRC----TNTLGSFQCNCPQGYAGPRCEIDVNECLSNPCQNDSTCLDQIGEFQCI 476
Query: 406 CPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQY-------SQC 454
C PG+ G C+ +C + C + G C++K CDCP + G CQ+ + C
Sbjct: 477 CMPGYEGLYCETNIDECASNPCLHNGKCIDKINEFRCDCPTGFSGNLCQHDFDECTSTPC 536
Query: 455 KN--YCVNGECSITDSGPKCMCSPGYSGKKC---------DTC---TCLNGDSGPKCMCS 500
KN C++G S T C C+ G++G+ C D C TC +G + C+C
Sbjct: 537 KNGAKCLDGPNSYT-----CQCTEGFTGRHCEQDINECIPDPCHYGTCKDGIATFTCLCR 591
Query: 501 PGYSGKKCD-------TCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTS------ 547
PGY+G+ CD + CLNGG C +C CP TG CE + D +
Sbjct: 592 PGYTGRLCDNDINECLSKPCLNGGQCTDRENGYICTCPKGTTGVNCETKIDDCASNLCDN 651
Query: 548 ----------------------CASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQ 585
C N+C N C N GTC +C C Y
Sbjct: 652 GKCIDKIDGYECTCEPGYTGKLCNININECDSNPCRNGGTCKDQINGFTCVCPDGYHDHM 711
Query: 586 C----TEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS-ERVSC-AHFCFNG 639
C E +P H C + G+ Y C C GWSG C C ++ C NG
Sbjct: 712 CLSEVNECNSNPCIHGACHD-GVNGYK------CDCEAGWSGSNCDINNNECESNPCMNG 764
Query: 640 GTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYIS 676
GTC++ + IC C G++G CQT ++ S
Sbjct: 765 GTCKDMTGAY------ICTCKAGFSGPNCQTNINECS 795
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 165/402 (41%), Gaps = 81/402 (20%)
Query: 331 CICQENFYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES--RI 386
C C F G+YC+ N PCLN G C TYKC C YTG C++ R
Sbjct: 1006 CQCPPGFTGSYCQHDINECDSKPCLNGGTCQDSYG----TYKCTCPQGYTGLNCQNLVRW 1061
Query: 387 CENK-CHNGGTCIATTQ--TCVCPPGFTGDTC------------QQCLNLK--CQNGGVC 429
C++ C NGG C T C C G+TG C QQ +++ C+N G+C
Sbjct: 1062 CDSSPCKNGGKCWQTNNFYRCECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMC 1121
Query: 430 VNKTTGLECDCPKFYYGKNC--QYSQCK-NYCVNGE-CSITDSGPKCMCSPGYSGKKC-- 483
V+ C C Y G C Q +C N C NG C+ G C C GY G C
Sbjct: 1122 VDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSE 1181
Query: 484 -----------DTCTCLNGDSGPKCMCSPGYSGKKC----DTCT-----------CLNGG 517
+ TC++ + KC C G G C D CT C N G
Sbjct: 1182 EINECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNG 1241
Query: 518 TCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGT--CVLIEGKPSC 575
CI C CP + G RCE GD N+C N C + GT C+ + C
Sbjct: 1242 KCIDRVGGYNCICPPGFVGERCE---GD------VNECLSNPCDSRGTQNCIQLVNDYRC 1292
Query: 576 KCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSKQGKP--VCTCVNGWSGITCS-ERVS 631
+C ++G++C D C C N G C+ + + +C C G+ G TC + +
Sbjct: 1293 ECRQGFTGRRCESVVDG--CKGMPCRNGGTCAVASNTERGFICKCPPGFDGATCEYDSRT 1350
Query: 632 CAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
C++ C NGGTC + C+C GY G CQ V
Sbjct: 1351 CSNLRCQNGGTC------ISVLTSSKCVCSEGYTGATCQYPV 1386
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 160/440 (36%), Gaps = 102/440 (23%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
N+ CD PC C + + C C T + C V P+ +C +
Sbjct: 1056 QNLVRWCDSSPCKNGGKCWQTNNFYRCECKSGWT--------GVYCDV-PSVSCEVAAKQ 1106
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
+ H C N G C D C CQ
Sbjct: 1107 QGVDIVHLCR------------------------------NSGMC-VDTGNTHFCRCQAG 1135
Query: 337 FYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKC 391
+ G+YCE+ + S PC N C L Y C C Y G C I E + C
Sbjct: 1136 YTGSYCEEQVDECSPNPCQNGATCTDYLG----GYSCECVAGYHGVNCSEEINECLSHPC 1191
Query: 392 HNGGTCIATTQT--CVCPPGFTGDTCQQ------------CLNLKCQNGGVCVNKTTGLE 437
NGGTCI T C CP G G C+ L KC N G C+++ G
Sbjct: 1192 QNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKCIDRVGGYN 1251
Query: 438 CDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKC 497
C CP + G+ C+ N C++ C T C+ + +C
Sbjct: 1252 CICPPGFVGERCEGD--VNECLSNPCDSR-----------------GTQNCIQLVNDYRC 1292
Query: 498 MCSPGYSGKKCDTCT-------CLNGGTCIPNS---KNNVCKCPSQYTGRRCECAVGDTS 547
C G++G++C++ C NGGTC S + +CKCP + G CE +
Sbjct: 1293 ECRQGFTGRRCESVVDGCKGMPCRNGGTCAVASNTERGFICKCPPGFDGATCE--YDSRT 1350
Query: 548 CASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCS- 606
C++L C N GTC+ + C C Y+G C SP + C N G C
Sbjct: 1351 CSNL-------RCQNGGTCISVLTSSKCVCSEGYTGATCQYPVISPCASHPCYNGGTCQF 1403
Query: 607 YSKQGKPVCTCVNGWSGITC 626
++++ C C ++G+ C
Sbjct: 1404 FAEEPFFQCFCPKNFNGLFC 1423
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 513 CLNGGTC-IPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCT-PNYCSNNGTCV-LI 569
CLNGG C + VC C + Y G RC+ N CT N C N GTC ++
Sbjct: 29 CLNGGRCEMTPGGTGVCLCGNLYFGERCQ----------FPNPCTIKNQCMNFGTCEPVL 78
Query: 570 EGKPS---CKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSY-SKQGKPVCTCVNGWSGIT 625
+G C C ++ K C D+ +N C N G C + + C C GW+G +
Sbjct: 79 QGNAIDFICHCPVGFTDKVCLTPVDNACVNNPCRNGGTCELLNSVTEYKCRCPPGWTGDS 138
Query: 626 CSERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISK 677
C + CA + C NGG C L +++ IC CP G+ G C+ ++ S+
Sbjct: 139 CQQADPCASNPCANGGKC------LPFEIQYICKCPPGFHGATCKQDINECSQ 185
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4
PE=1 SV=2
Length = 2003
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 201/508 (39%), Gaps = 80/508 (15%)
Query: 218 NVTNHCDDKPCHQSALCINLP--SSHTCLCP---------DHLTEELNVTSGKMSCKVAP 266
++ + C +PCH A C P S CLC L E L G C+
Sbjct: 391 HLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDECLMAQQGPSPCE--- 447
Query: 267 ARTCYLDCNHG----NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCE 322
HG N P S CLCP T + C P C+ G+
Sbjct: 448 ---------HGGSCLNTPGSFNCLCPPGYTGS-RCEADHNECLSQP-------CHPGSTC 490
Query: 323 FDDDFDPHCICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGA 380
D HC+C G CE N + PCLN C+ DL + ++C C P ++G
Sbjct: 491 LDLLATFHCLCPPGLEGQLCEVETNECASAPCLNHADCH-DLLN---GFQCICLPGFSGT 546
Query: 381 RCESRICE---NKCHNGGTCIATTQT--CVCPPGFTGDTCQ----QCLNLKCQNGGVCVN 431
RCE I E + C NGG C C C PGF G CQ +CL+ C G C++
Sbjct: 547 RCEEDIDECRSSPCANGGQCQDQPGAFHCKCLPGFEGPRCQTEVDECLSDPCPVGASCLD 606
Query: 432 KTTGLECDCPKFYYGKNCQYSQCK-NYCVNGE-CSITDSGPKCMCSPGYSG--KKCDTCT 487
C CP + G+ C+ C N C + C C+C G G D CT
Sbjct: 607 LPGAFFCLCPSGFTGQLCEVPLCAPNLCQPKQICKDQKDKANCLCPDGSPGCAPPEDNCT 666
Query: 488 CLNGD-SGPKCMCSPGYSGKKCD-------TCTCLNGGTCIPNSKNNVCKCPSQYTGRRC 539
C +G C+C G++G +C+ + C +GGTC P C CP+ YTG
Sbjct: 667 CHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCTCPTGYTG--- 723
Query: 540 ECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYC 599
+C+ C C N G+C G C C P ++G QC D C
Sbjct: 724 ------PTCSEEMTACHSGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDY-CVSAPC 776
Query: 600 DNAGLCSYSKQGKPVCTCVNGWSGITCSE--RVSCAHFCFNGGTCREQNYSLDPDLKPIC 657
N G C ++ G C C G+ G C R SCA CR + D P C
Sbjct: 777 FNGGTC-VNRPGTFSCLCAMGFQGPRCEGKLRPSCAD-----SPCRNRATCQDSPQGPRC 830
Query: 658 ICPRGYAGVRCQTLVHYISKKQSYVNSH 685
+CP GY G CQTL+ ++K NSH
Sbjct: 831 LCPTGYTGGSCQTLMDLCAQKPCPRNSH 858
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 209/565 (36%), Gaps = 125/565 (22%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEEL--------NVTSGKMSCK 263
E + + C PC A C++LP + CLCP T +L N+ K CK
Sbjct: 582 EGPRCQTEVDECLSDPCPVGASCLDLPGAFFCLCPSGFTGQLCEVPLCAPNLCQPKQICK 641
Query: 264 VAPARTCYL--DCNHGNLPSSHTCLCPDHLTEE----LNVTSGKMSCKVAPARTCYLDCN 317
+ L D + G P C C + +V C+ C
Sbjct: 642 DQKDKANCLCPDGSPGCAPPEDNCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCA 701
Query: 318 HGTCEFDDDFDPHCICQENFYGTYC--EKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAP 375
HG + +C C + G C E PCLN G C P Y C C P
Sbjct: 702 HGGTCYPQPSGYNCTCPTGYTGPTCSEEMTACHSGPCLNGGSCNPSPG----GYYCTCPP 757
Query: 376 SYTGARCESRI---CENKCHNGGTCI--ATTQTCVCPPGFTGDTCQ-----QCLNLKCQN 425
S+TG +C++ C NGGTC+ T +C+C GF G C+ C + C+N
Sbjct: 758 SHTGPQCQTSTDYCVSAPCFNGGTCVNRPGTFSCLCAMGFQGPRCEGKLRPSCADSPCRN 817
Query: 426 GGVCVNKTTGLECDCPKFYYGKNCQ----------------------------------- 450
C + G C CP Y G +CQ
Sbjct: 818 RATCQDSPQGPRCLCPTGYTGGSCQTLMDLCAQKPCPRNSHCLQTGPSFHCLCLQGWTGP 877
Query: 451 -----YSQCK-----------NYCVNGECSITDSGPK--CMCSPGYSGKKC--------- 483
S C+ + C NG + DSGP C C PG+ G C
Sbjct: 878 LCNLPLSSCQKAALSQGIDVSSLCHNGGLCV-DSGPSYFCHCPPGFQGSLCQDHVNPCES 936
Query: 484 ----DTCTCLNGDSGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPS 532
+ TC+ SG C C+PGY G+ C D C C N GTC P C CP
Sbjct: 937 RPCQNGATCMAQPSGYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGGFHCACPP 996
Query: 533 QYTGRRCECAVGDTSCASLANKCTPNYCSNNGT--CVLIEGKPSCKCLPPYSGKQCTERE 590
+ G RCE GD ++C C GT C + C+CLP ++G+ C E E
Sbjct: 997 GFVGLRCE---GDV------DECLDQPCHPTGTAACHSLANAFYCQCLPGHTGQWC-EVE 1046
Query: 591 DSPSCHNYCDNAGLCSYSKQGKP---VCTCVNGWSGITCSERV-SCA-HFCFNGGTCREQ 645
P C + G C + G P +C C G+ G TCS R SC H C +GG C
Sbjct: 1047 IDPCHSQPCFHGGTCEATA-GSPLGFICHCPKGFEGPTCSHRAPSCGFHHCHHGGLCLP- 1104
Query: 646 NYSLDPDLKPICICPRGYAGVRCQT 670
S P P C C GY G C T
Sbjct: 1105 --SPKPGFPPRCACLSGYGGPDCLT 1127
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 193/501 (38%), Gaps = 109/501 (21%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLP 280
N C +PCH + C++L ++ CLCP L +L C ++ N
Sbjct: 477 NECLSQPCHPGSTCLDLLATFHCLCPPGLEGQL----------------CEVETNE---- 516
Query: 281 SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTC-EFDDDFDPHCICQENFYG 339
C AP NH C + + F CIC F G
Sbjct: 517 -----------------------CASAPCL------NHADCHDLLNGF--QCICLPGFSG 545
Query: 340 TYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNG 394
T CE+ + PC N G C + C C P + G RC++ + E + C G
Sbjct: 546 TRCEEDIDECRSSPCANGGQCQDQPG----AFHCKCLPGFEGPRCQTEVDECLSDPCPVG 601
Query: 395 GTCIATTQT--CVCPPGFTGDTCQ--QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ 450
+C+ C+CP GFTG C+ C CQ +C ++ C CP G C
Sbjct: 602 ASCLDLPGAFFCLCPSGFTGQLCEVPLCAPNLCQPKQICKDQKDKANCLCPDGSPG--CA 659
Query: 451 YSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDT-------------CTCLNGDSGPKC 497
+ C +G C + C+C G++G +C+ TC SG C
Sbjct: 660 PPEDNCTCHHGHCQRS----SCVCDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNC 715
Query: 498 MCSPGYSGKKCD-------TCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCAS 550
C GY+G C + CLNGG+C P+ C CP +TG +C+ +
Sbjct: 716 TCPTGYTGPTCSEEMTACHSGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTST------- 768
Query: 551 LANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSK 609
+ C C N GTCV G SC C + G +C E + PSC + C N C S
Sbjct: 769 --DYCVSAPCFNGGTCVNRPGTFSCLCAMGFQGPRC-EGKLRPSCADSPCRNRATCQDSP 825
Query: 610 QGKPVCTCVNGWSGITCSERVS-CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRC 668
QG P C C G++G +C + CA C ++ L C+C +G+ G C
Sbjct: 826 QG-PRCLCPTGYTGGSCQTLMDLCAQK-----PCPRNSHCLQTGPSFHCLCLQGWTGPLC 879
Query: 669 QTLVHYISKKQSYVNSHISSI 689
+ K +SS+
Sbjct: 880 NLPLSSCQKAALSQGIDVSSL 900
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 194/510 (38%), Gaps = 91/510 (17%)
Query: 218 NVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG 277
+ + C PC +C+ C CP E C P H
Sbjct: 155 QLRDFCSANPCVNGGVCLATYPQIQCHCPPGF-EGHACERDVNECFQDPGPCPKGTSCHN 213
Query: 278 NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPH---CICQ 334
L S CLCP + +E ++ P R C N GTC+ + D C+C
Sbjct: 214 TL-GSFQCLCP--VGQEGPRC--ELRAGPCPPRGCS---NGGTCQLMPEKDSTFHLCLCP 265
Query: 335 ENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CEN 389
F G CE VN C C N G C L TY C C ++TG C + CE
Sbjct: 266 PGFIGPDCE-VNPDNCVSHQCQNGGTCQDGLD----TYTCLCPETWTGWDCSEDVDECET 320
Query: 390 K----CHNGGTC--IATTQTCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTGLECD 439
+ C NGGTC A + CVC G+ G +C++ C+ C G C+++ C
Sbjct: 321 QGPPHCRNGGTCQNSAGSFHCVCVSGWGGTSCEENLDDCIAATCAPGSTCIDRVGSFSCL 380
Query: 440 CPKFYYGKNCQYSQCKNYCVNGEC---------SITDSGPKCMCSPGYSGKKC--DTCTC 488
CP G C ++ C++ C +T S C+C PGYSG C D C
Sbjct: 381 CPPGRTGLLCHL---EDMCLSQPCHGDAQCSTNPLTGST-LCLCQPGYSGPTCHQDLDEC 436
Query: 489 LNGDSGPK----------------CMCSPGYSGKKCD-------TCTCLNGGTCIPNSKN 525
L GP C+C PGY+G +C+ + C G TC+
Sbjct: 437 LMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLAT 496
Query: 526 NVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQ 585
C CP G+ CE N+C C N+ C + C CLP +SG +
Sbjct: 497 FHCLCPPGLEGQLCEVET---------NECASAPCLNHADCHDLLNGFQCICLPGFSGTR 547
Query: 586 CTEREDSPSCHNY-CDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTC 642
C E D C + C N G C + G C C+ G+ G C V + C G +C
Sbjct: 548 CEEDID--ECRSSPCANGGQCQ-DQPGAFHCKCLPGFEGPRCQTEVDECLSDPCPVGASC 604
Query: 643 REQNYSLDPDLKPICICPRGYAGVRCQTLV 672
+ + C+CP G+ G C+ +
Sbjct: 605 LDLPGAF------FCLCPSGFTGQLCEVPL 628
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 176/486 (36%), Gaps = 154/486 (31%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAP 375
G C P C C + G C+ + S PC+N G+C T+P+ +CHC P
Sbjct: 129 KRGRCHIQASGRPQCSCMPGWTGEQCQLRDFCSANPCVNGGVCL--ATYPQ--IQCHCPP 184
Query: 376 SYTGARCESRI-----------------------------------CENK--------CH 392
+ G CE + CE + C
Sbjct: 185 GFEGHACERDVNECFQDPGPCPKGTSCHNTLGSFQCLCPVGQEGPRCELRAGPCPPRGCS 244
Query: 393 NGGTCI------ATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPK 442
NGGTC +T C+CPPGF G C+ C++ +CQNGG C + C CP+
Sbjct: 245 NGGTCQLMPEKDSTFHLCLCPPGFIGPDCEVNPDNCVSHQCQNGGTCQDGLDTYTCLCPE 304
Query: 443 FYYGKNCQ------YSQCKNYCVN-GECSITDSGPKCMCSPGYSGKKCD----------- 484
+ G +C +Q +C N G C + C+C G+ G C+
Sbjct: 305 TWTGWDCSEDVDECETQGPPHCRNGGTCQNSAGSFHCVCVSGWGGTSCEENLDDCIAATC 364
Query: 485 -------------TCTCLNGDSG----------------------------PKCMCSPGY 503
+C C G +G C+C PGY
Sbjct: 365 APGSTCIDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGY 424
Query: 504 SGKKC----DTC--------TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASL 551
SG C D C C +GG+C+ + C CP YTG RCE +
Sbjct: 425 SGPTCHQDLDECLMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCE---------AD 475
Query: 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQC---TEREDSPSCHNYCDNAGLCSYS 608
N+C C TC+ + C C P G+ C T S C N+ D L +
Sbjct: 476 HNECLSQPCHPGSTCLDLLATFHCLCPPGLEGQLCEVETNECASAPCLNHADCHDLLNGF 535
Query: 609 KQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGV 666
+ C C+ G+SG C E + + C NGG C++Q + C C G+ G
Sbjct: 536 Q-----CICLPGFSGTRCEEDIDECRSSPCANGGQCQDQPGAFH------CKCLPGFEGP 584
Query: 667 RCQTLV 672
RCQT V
Sbjct: 585 RCQTEV 590
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 151/602 (25%), Positives = 221/602 (36%), Gaps = 183/602 (30%)
Query: 224 DDKPCHQSALCINLPSSHTCLCPD-------------------------HLTEELNVT-- 256
D PC + C N S CLCP L E + T
Sbjct: 201 DPGPCPKGTSCHNTLGSFQCLCPVGQEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFH 260
Query: 257 -----SGKMS--CKVAPARTCYLDCNHGNL----PSSHTCLCPDHLT-----EELN--VT 298
G + C+V P C +G ++TCLCP+ T E+++ T
Sbjct: 261 LCLCPPGFIGPDCEVNPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECET 320
Query: 299 SGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNS---------- 348
G C+ N GTC+ + HC+C + GT CE+ +
Sbjct: 321 QGPPHCR-----------NGGTCQ-NSAGSFHCVCVSGWGGTSCEENLDDCIAATCAPGS 368
Query: 349 -----------MCP-------CLNQGMCYPDLTHPEP---------TYKCHCAPSYTGAR 381
+CP C + MC H + + C C P Y+G
Sbjct: 369 TCIDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGYSGPT 428
Query: 382 CESRICE--------NKCHNGGTCIATTQT--CVCPPGFTGDTCQ----QCLNLKCQNGG 427
C + E + C +GG+C+ T + C+CPPG+TG C+ +CL+ C G
Sbjct: 429 CHQDLDECLMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGS 488
Query: 428 VCVNKTTGLECDCPKFYYGKNCQYS--QCKNY-CVN-GECSITDSGPKCMCSPGYSGKKC 483
C++ C CP G+ C+ +C + C+N +C +G +C+C PG+SG +C
Sbjct: 489 TCLDLLATFHCLCPPGLEGQLCEVETNECASAPCLNHADCHDLLNGFQCICLPGFSGTRC 548
Query: 484 D-------TCTCLNGD------SGPKCMCSPGYSGKKC----DTC---TCLNGGTCIPNS 523
+ + C NG C C PG+ G +C D C C G +C+
Sbjct: 549 EEDIDECRSSPCANGGQCQDQPGAFHCKCLPGFEGPRCQTEVDECLSDPCPVGASCLDLP 608
Query: 524 KNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSG 583
C CPS +TG+ CE + C PN C C + K +C C P
Sbjct: 609 GAFFCLCPSGFTGQLCEVPL-----------CAPNLCQPKQICKDQKDKANCLC--PDGS 655
Query: 584 KQCTEREDSPSCHN-----------------------------YCDNAGLCSYSKQGKPV 614
C ED+ +CH+ C + G C Y +
Sbjct: 656 PGCAPPEDNCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTC-YPQPSGYN 714
Query: 615 CTCVNGWSGITCSERVSCAHF--CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
CTC G++G TCSE ++ H C NGG+C C CP + G +CQT
Sbjct: 715 CTCPTGYTGPTCSEEMTACHSGPCLNGGSCNPSPGGY------YCTCPPSHTGPQCQTST 768
Query: 673 HY 674
Y
Sbjct: 769 DY 770
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 138/339 (40%), Gaps = 76/339 (22%)
Query: 389 NKCHNGGTCIATT---QTCVCPPGFTGDTCQ---QCLNLK-CQNGGVC------------ 429
C NGGTC++ + TC C PGF G+TCQ C N + CQNGG C
Sbjct: 33 EPCANGGTCLSLSLGQGTCQCAPGFLGETCQFPDPCQNAQLCQNGGSCQALLPAPLGLPS 92
Query: 430 --VNKTTGLECDCPKFYYGKNCQYSQCKNYCV------NGECSITDSG-PKCMCSPGYSG 480
T C C + G+ CQ ++ ++ C G C I SG P+C C PG++G
Sbjct: 93 SPSPLTPSFLCTCLPGFTGERCQ-AKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWTG 151
Query: 481 KKC---DTCT---CLNGD------SGPKCMCSPGYSGKKC---------DTCTCLNGGTC 519
++C D C+ C+NG +C C PG+ G C D C G +C
Sbjct: 152 EQCQLRDFCSANPCVNGGVCLATYPQIQCHCPPGFEGHACERDVNECFQDPGPCPKGTSC 211
Query: 520 IPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPS----C 575
+ C CP G RCE G C P CSN GTC L+ K S C
Sbjct: 212 HNTLGSFQCLCPVGQEGPRCELRAG---------PCPPRGCSNGGTCQLMPEKDSTFHLC 262
Query: 576 KCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV----- 630
C P + G C D+ H C N G C C C W+G CSE V
Sbjct: 263 LCPPGFIGPDCEVNPDNCVSHQ-CQNGGTCQDGLDTY-TCLCPETWTGWDCSEDVDECET 320
Query: 631 SCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQ 669
C NGGTC+ S C+C G+ G C+
Sbjct: 321 QGPPHCRNGGTCQNSAGSFH------CVCVSGWGGTSCE 353
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 164/412 (39%), Gaps = 65/412 (15%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCE---KVNNSMCPCLNQGMCYPDLTHP-------- 365
N GTC C C F G C+ N+ C N G C L P
Sbjct: 37 NGGTCLSLSLGQGTCQCAPGFLGETCQFPDPCQNAQL-CQNGGSCQALLPAPLGLPSSPS 95
Query: 366 --EPTYKCHCAPSYTGARCESRICE----NKCHNGGTC---IATTQTCVCPPGFTGDTCQ 416
P++ C C P +TG RC++++ + + C G C + C C PG+TG+ CQ
Sbjct: 96 PLTPSFLCTCLPGFTGERCQAKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWTGEQCQ 155
Query: 417 Q---CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCM 473
C C NGGVC+ ++C CP + G C+ VN EC D GP
Sbjct: 156 LRDFCSANPCVNGGVCLATYPQIQCHCPPGFEGHACERD------VN-EC-FQDPGPCPK 207
Query: 474 CSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTC--IP--NSKNNVCK 529
+ ++ C C G GP+C G C C NGGTC +P +S ++C
Sbjct: 208 GTSCHNTLGSFQCLCPVGQEGPRCELRAG----PCPPRGCSNGGTCQLMPEKDSTFHLCL 263
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
CP + G CE + C + C N GTC +C C ++G C+E
Sbjct: 264 CPPGFIGPDCEVN---------PDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSED 314
Query: 590 EDSPSCHN--YCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQ 645
D +C N G C S G C CV+GW G +C E + A C G TC ++
Sbjct: 315 VDECETQGPPHCRNGGTCQNSA-GSFHCVCVSGWGGTSCEENLDDCIAATCAPGSTCIDR 373
Query: 646 NYSLDPDLKPICICPRGYAGVRCQTLVHYISK-----KQSYVNSHISSILIL 692
S C+CP G G+ C +S+ Q N S L L
Sbjct: 374 VGSFS------CLCPPGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCL 419
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 60/170 (35%)
Query: 557 PNYCSNNGTCV-LIEGKPSCK--------------------------------------- 576
P C+N GTC+ L G+ +C+
Sbjct: 32 PEPCANGGTCLSLSLGQGTCQCAPGFLGETCQFPDPCQNAQLCQNGGSCQALLPAPLGLP 91
Query: 577 -------------CLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSG 623
CLP ++G++C + + P ++C G C G+P C+C+ GW+G
Sbjct: 92 SSPSPLTPSFLCTCLPGFTGERCQAKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWTG 151
Query: 624 ITCSERVSC-AHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
C R C A+ C NGG C + P ++ C CP G+ G C+ V
Sbjct: 152 EQCQLRDFCSANPCVNGGVC----LATYPQIQ--CHCPPGFEGHACERDV 195
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 119/208 (57%), Gaps = 8/208 (3%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I N+ +RE + + + P G+AVDW+G+ +YWTD+G + I S L G+
Sbjct: 538 IERANLDGSQRE---RRITEGVDTPEGLAVDWIGRRIYWTDSG---KSVIEGSDLSGKHH 591
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI 123
+ ++ ++ P IA+ P + R+FWT+ G+ PRI +S+ G ++ + +N+ P+GI I
Sbjct: 592 QIIIKESISRPRGIAVHPKARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAI 651
Query: 124 DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
DY + LYW D K IE +L+G R + T+++ P+ L VFED+++FS + ++
Sbjct: 652 DYLTDTLYWCDTKLSVIEMADLDGSKRRRL--TQNDVGHPFSLAVFEDHVWFSDWAIPSV 709
Query: 184 LKINKFGNSDFNVLANNLNRASDVLILQ 211
+++NK + L ++ + S ++++
Sbjct: 710 IRVNKRTGQNRVRLRGSMLKPSSLVVVH 737
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 39/281 (13%)
Query: 30 GVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWT 89
G+A++W+ + TD R I V+ + G R LL++ L P +I ++P +FW+
Sbjct: 121 GLAINWIDGEILRTD---RWKGVITVTDMNGNNSRVLLSS-LKRPANILVDPTERLIFWS 176
Query: 90 ELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART----IESINL 145
+ + + A + G + L++ + + +D +RL+WA I S +
Sbjct: 177 SV-VTGNLHRADLGGMDVKTLLEAPERISV-LILDILDKRLFWAQDGREGSHGYIHSCDY 234
Query: 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRAS 205
NG + H + + +F D + +S + I +K ++ NV+ NL+ AS
Sbjct: 235 NGGSIHHIRHQAR--HDLLTMAIFGDKILYSALKEKAIWIADK--HTGKNVVRVNLDPAS 290
Query: 206 ------DVLILQENKQAHNVTNHCDDKPCHQS------ALCINLPSSHTCLCPDHLTEEL 253
V+ L N D + C Q +L P+S + C + T
Sbjct: 291 VPPRELRVVHLHAQPGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYT--- 347
Query: 254 NVTSGKMSCKVAPARTCYLDCNHG------NLPSSHTCLCP 288
++ + C+ C L NHG N+P S+ C CP
Sbjct: 348 -LSRDRKYCE--DVNECALQ-NHGCTLGCENIPGSYYCTCP 384
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 67/175 (38%), Gaps = 27/175 (15%)
Query: 488 CLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSK--NNVCKCPSQYTGRRCECAVGD 545
C+N + G C CS GY G D CL+ C S + C + G C CA
Sbjct: 892 CINTEGGYVCQCSEGYEG---DGIYCLDVDECQQGSHGCSENATCTNTEGGYNCTCA--- 945
Query: 546 TSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLC 605
C S P+ S + + GK C + S C PS YC N G+C
Sbjct: 946 -GCPSAPGLPCPDSTSPS-----LLGKDGCHWV-RNSNTGC-----PPSYDGYCLNGGVC 993
Query: 606 SYSKQ-GKPVCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICIC 659
Y + + VC CV G+ G ER C H R +Y D+ + +C
Sbjct: 994 MYVESVDRYVCNCVIGYIG----ER--CQHRDLRWWKLRHADYGQRHDITVVSVC 1042
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 154/448 (34%), Gaps = 89/448 (19%)
Query: 103 DGKNKFNLVDNNIQWPTGITID--YPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160
DG N LV + + +D Y +RLYW D + + ++ + NG + V + N
Sbjct: 63 DGTNHQQLV---VDAGVSVVMDFHYKEERLYWVDLERQLLQRVFFNGSGQETVCKVDKN- 118
Query: 161 YKPYKLEV-FEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENK---QA 216
L + + D T R ++ + ++ VL ++L R +++L+ + +
Sbjct: 119 --VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLSSLKRPANILVDPTERLIFWS 176
Query: 217 HNVTN--HCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDC 274
VT H D + P + L D L + L +C D
Sbjct: 177 SVVTGNLHRADLGGMDVKTLLEAPERISVLILDILDKRLFWAQDGREGSHGYIHSC--DY 234
Query: 275 NHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH-GTCEFDDDFDPHCIC 333
N G++ D LT + + K+ + ++ H G + DP +
Sbjct: 235 NGGSIHHIRHQARHDLLT--MAIFGDKILYSALKEKAIWIADKHTGKNVVRVNLDPASVP 292
Query: 334 QENFYGTYCE---------KVNNSMCPCLNQGMCYPDLTHPEP-TYKCHCAPSYTGARCE 383
+ + ++S +G C L+ +P + CA YT +R +
Sbjct: 293 PRELRVVHLHAQPGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYTLSR-D 351
Query: 384 SRICEN---------KCHNGGTCIATTQTCVCPPGFT----GDTCQQCLNLKCQNGGVCV 430
+ CE+ C G I + C CP GF G C + +
Sbjct: 352 RKYCEDVNECALQNHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVA---------- 401
Query: 431 NKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPG-YSGKKCDTCT-C 488
CP S+C + C+ +T GP C+C G GK TCT C
Sbjct: 402 ---------CPG-------NRSECSHDCI-----LTSDGPLCICPAGSVLGKDGKTCTGC 440
Query: 489 LNGDSGP-------------KCMCSPGY 503
D+G +C C PGY
Sbjct: 441 SFSDNGGCSQICLPLSLASWECDCFPGY 468
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%)
Query: 4 ISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK 63
I N+ +RE + + L G+A+DW+G+ +YWTD+G + + S L G+
Sbjct: 542 IERANMDGSQRERLITEGVDTLE---GLALDWIGRRIYWTDSG---KSVVGGSDLSGKHH 595
Query: 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITI 123
R ++ ++ P IA+ P + R+FWT++G+ PRI AS+ G ++ + +N+ P+GITI
Sbjct: 596 RIIIQERISRPRGIAVHPRARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITI 655
Query: 124 DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNI 183
DY + LYW D K IE NL+G R + D G+ P+ L VFED+L+ S + ++
Sbjct: 656 DYLTDTLYWCDTKRSVIEMANLDGSKRRRLIQN-DVGH-PFSLAVFEDHLWVSDWAIPSV 713
Query: 184 LKINKFGNSDFNVLANNLNRASDVLILQ 211
+++NK + L ++ + S ++++
Sbjct: 714 IRVNKRTGQNRVRLQGSMLKPSSLVVVH 741
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 128/324 (39%), Gaps = 41/324 (12%)
Query: 30 GVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWT 89
G+A+DW+ + W D + + I V+ + G+ R LL++ L P +IA++P+ MFW+
Sbjct: 127 GLAIDWIDDEVLWVD---QQNGVITVTDMTGKNSRVLLSS-LKHPSNIAVDPIERLMFWS 182
Query: 90 ELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART----IESINL 145
+ + A + G + L++ + +T+D +RL+W I S +
Sbjct: 183 S-EVTGSLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKRLFWVQDSGEGSHAYIHSCDY 239
Query: 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV--LANNLNR 203
G ++ H + + F D +++S ++ I NK D L +
Sbjct: 240 EGGSVRLIRHQARHSLS--SMAFFGDRIFYSVLKSKAIWIANKHTGKDTVRINLHPSFVT 297
Query: 204 ASDVLILQENKQAHNVTNHCD---------DKPCHQSALCINLPSSHTCLCPDHLTEELN 254
++++ Q D +PC + LC P SH+ C E
Sbjct: 298 PGKLMVVHPRAQPRTEDAAKDPDPELLKQRGRPC-RFGLCERDPKSHSSAC----AEGYT 352
Query: 255 VTSGKMSCK-----VAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPA 309
++ + C+ C L C N P S+ C CP T + + GK ++
Sbjct: 353 LSRDRKYCEDVNECATQNHGCTLGCE--NTPGSYHCTCP---TGFVLLPDGKQCHELVSC 407
Query: 310 RTCYLDCNHGTCEFDDDFDPHCIC 333
C+HG C D P CIC
Sbjct: 408 PGNVSKCSHG-CVLTSD-GPRCIC 429
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl
PE=1 SV=2
Length = 1984
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 14/233 (6%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80
+ S L P +AVDW+ +N+Y++D R +I V + +G L+ +++P +A+
Sbjct: 469 LTSGLDAPEDLAVDWLTQNIYFSDNIMR---HIAVCSNDGLNCAVLVTQDVHQPRSLAVW 525
Query: 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTI 140
P G MFWT+ G KP I AS+DG +V +NI+WP GI +D QR+YW D K ++
Sbjct: 526 PQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSV 585
Query: 141 ESINLNGKDRFVVYHTEDNGYK-PYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLAN 199
+++ +G R V D K PY L +FED LY+S + T ++ +KF D +LA
Sbjct: 586 QTVRPDGTGRRTVL---DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAK 642
Query: 200 NLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP---SSHTCLCPDHL 249
+ + V I KQ N + C++ C S LC+ H+C CPD +
Sbjct: 643 DRTIYA-VHIYHPAKQP-NSPHGCENATC--SHLCLLAEPEIGGHSCACPDGM 691
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 18/264 (6%)
Query: 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60
++ G V ++ + + L P ++VDWV N+Y + I + G
Sbjct: 1508 FSAEDEGIVYQIDLQTKVIVRALGLPAPTKLSVDWVTGNVYVLSG----AQEIQACSFVG 1563
Query: 61 RK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIK------PRISGASIDGKNKFNLVDN 113
R R + +A++ R+F+ + + I A +DG + L+
Sbjct: 1564 RMCGRIVHVKSPRHVKHLAVDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQR 1623
Query: 114 NIQWPTGITIDYPSQRLYWADPKARTIESINLNGK----DRFVVYHTEDNG-YKPYKLEV 168
+ + T +T D Q LY+ D RT+E I+ K R + + N P L V
Sbjct: 1624 SESFMTALTTDPHQQLLYFVDQHMRTLERISYRLKTGPMRRPEIMLQKSNALMHPSGLSV 1683
Query: 169 FEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPC 228
+E+N + + ++ +G+ + ++ N+ A D+++ ++Q ++ C C
Sbjct: 1684 YENNAFIVNLGSVEAVQCALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHAHC 1743
Query: 229 HQSALCINLPSSHTCLCPDHLTEE 252
H LC+ + C+C + L E
Sbjct: 1744 H--GLCLQADYGYECMCGNRLVAE 1765
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL-LNTGLNEPYDIAL 79
V SNL + +A D + +NLYW D I V +L+ R + + G P + +
Sbjct: 776 VRSNLGNVSALAFDHLSRNLYWADT---ERAVIEVLSLQTRHRALIRFFPGQEVPIGLTV 832
Query: 80 EPLSGRMFWTELGIK-PRISGASIDGKNKF------NLVDNNIQWPTGITIDYPSQRLYW 132
P G ++ + I + GK + +L D++I+ + DY +Q ++W
Sbjct: 833 MPAEGYLYVVLKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIK----LVTDYETQTIFW 888
Query: 133 ADPKARTIESINLNGKDRFVVYHTE---DNGYKPYKLEVFEDNLYFSTYRTNNILKINK 188
+D I N + V H++ +PY L + +L+++ T I +K
Sbjct: 889 SDSDLGRISYSN------YRVPHSQIFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHK 941
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 163/374 (43%), Gaps = 66/374 (17%)
Query: 331 CICQENFYGTYCEKVNNSMC--PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI-- 386
C C F GT+CE+ N PC N C T +Y C C ++G CE+
Sbjct: 931 CDCLPGFRGTFCEEDINECASDPCRNGANC----TDCVDSYTCTCPAGFSGIHCENNTPD 986
Query: 387 -CENKCHNGGTCI--ATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECD 439
E+ C NGGTC+ + TC+CPPGFTG CQ +C + C +GG C + C
Sbjct: 987 CTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCT 1046
Query: 440 CPKFYYGKNCQ-------YSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGD 492
CP+ Y G NCQ S CKN G+C T + +C C G++G CD
Sbjct: 1047 CPQGYTGPNCQNLVHWCDSSPCKN---GGKCWQTHTQYRCECPSGWTGLYCDV------- 1096
Query: 493 SGPKCMCSPGYSGKKCDTCT-CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASL 551
P C + D C +GG C+ + C+C + YTG CE L
Sbjct: 1097 --PSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQAGYTGSYCE---------DL 1145
Query: 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQG 611
++C+P+ C N TC G SCKC+ Y G C+E D H C N G C
Sbjct: 1146 VDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSHP-CQNGGTC-LDLPN 1203
Query: 612 KPVCTCVNGWSGITCS----------ERVSCAHFCFNGGTCREQ--NYSLDPDLKPICIC 659
C+C G G+ C + VS + CFN GTC +Q YS C C
Sbjct: 1204 TYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVGGYS--------CTC 1255
Query: 660 PRGYAGVRCQTLVH 673
P G+ G RC+ V+
Sbjct: 1256 PPGFVGERCEGDVN 1269
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 165/383 (43%), Gaps = 59/383 (15%)
Query: 308 PARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMC-PCLNQGMCYPDLTHPE 366
P TC N G CE + + C+C F G C+ N + PC N G C+
Sbjct: 27 PGETCL---NGGKCEAANGTE-ACVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGV 82
Query: 367 PTYKCHCAPSYTGARCESRI----CENKCHNGGTCIATTQT---CVCPPGFTGDTCQQ-- 417
Y C CA ++G C + + N C NGGTC T T C CPPG++G +CQQ
Sbjct: 83 ADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD 142
Query: 418 -CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQY-----SQCKNYCVNGECSITDSGP- 470
C + C NGG C+ C CP ++G C+ Q C +G + G
Sbjct: 143 PCASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVGSY 202
Query: 471 KCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSK-NNVCK 529
+C+C ++G C+ P CSP C NGGTC P + C
Sbjct: 203 RCVCRATHTGPNCER---------PYVPCSPS---------PCQNGGTCRPTGDVTHECA 244
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
C +TG+ CE + D C N C N G CV +C+C P ++G+ CTE
Sbjct: 245 CLPGFTGQNCEENIDD---------CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTED 295
Query: 590 EDSPSCH-NYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQN 646
D N C N G C ++ G C CVNGW+G CSE + + CF+G TC ++
Sbjct: 296 VDECQLMPNACQNGGTC-HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRV 354
Query: 647 YSLDPDLKPICICPRGYAGVRCQ 669
S C CP G G+ C
Sbjct: 355 ASF------YCECPHGRTGLLCH 371
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 197/476 (41%), Gaps = 81/476 (17%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG-- 277
T+ C PC + C++ + C CP T L C+ C +G
Sbjct: 491 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHL--------CQYDVDECASTPCKNGAK 542
Query: 278 --NLPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCI 332
+ P+++TC+C + T E+++ C P Y C G F C+
Sbjct: 543 CLDGPNTYTCVCTEGYTGTHCEVDIDE----CDPDPCH--YGSCKDGVATFT------CL 590
Query: 333 CQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CE 388
C+ + G +CE N S PC + G C + Y C C TG CE + C
Sbjct: 591 CRPGYTGHHCETNINECSSQPCRHGGTC----QDRDNAYLCFCLKGTTGPNCEINLDDCA 646
Query: 389 NKCHNGGTCIATTQ--TCVCPPGFTGDTC----QQCLNLKCQNGGVCVNKTTGLECDCPK 442
+ + GTC+ C C PG+TG C +C C NGG C + G C CP+
Sbjct: 647 SSPCDSGTCLDKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINGFTCRCPE 706
Query: 443 FYYGKNC--QYSQC-KNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMC 499
Y+ C + ++C N CV+G C + +G KC C PG+SG CD
Sbjct: 707 GYHDPTCLSEVNECNSNPCVHGACRDSLNGYKCDCDPGWSGTNCDI-------------- 752
Query: 500 SPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNY 559
+ +C++ C+NGGTC + VC C ++G C+ + N+C N
Sbjct: 753 ----NNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNI---------NECASNP 799
Query: 560 CSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPV-CTCV 618
C N GTC+ C CL PY+G C E +P + C N G C S+ + C C
Sbjct: 800 CLNQGTCIDDVAGYKCNCLLPYTGATC-EVVLAPCAPSPCRNGGECRQSEDYESFSCVCP 858
Query: 619 NGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
GW G TC ++ C +G +C+ + C C GY+G C+T +
Sbjct: 859 TGWQGQTCEVDINECVLSPCRHGASCQNTHGGYR------CHCQAGYSGRNCETDI 908
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 167/395 (42%), Gaps = 78/395 (19%)
Query: 331 CICQENFYGTYCEKVNNSMC--PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE 388
C C+E F G C+ N PCLNQG C D+ YKC+C YTGA CE +
Sbjct: 777 CTCREGFSGPNCQTNINECASNPCLNQGTCIDDVA----GYKCNCLLPYTGATCEVVLAP 832
Query: 389 ---NKCHNGGTCIATTQ----TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLE 437
+ C NGG C + +CVCP G+ G TC+ +C+ C++G C N G
Sbjct: 833 CAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYR 892
Query: 438 CDCPKFYYGKNCQ--YSQCK-NYCVNG-ECSITDSGPKCMCSPGYSG-------KKCDTC 486
C C Y G+NC+ C+ N C NG C+ + C C PG+ G +C +
Sbjct: 893 CHCQAGYSGRNCETDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFRGTFCEEDINECASD 952
Query: 487 TCLNGDSGPKCM------CSPGYSGKKCDTCT-------CLNGGTCIPNSKNNVCKCPSQ 533
C NG + C+ C G+SG C+ T C NGGTC+ + C CP
Sbjct: 953 PCRNGANCTDCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPG 1012
Query: 534 YTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER---- 589
+TG C+ V N+C C + GTC G C C Y+G C
Sbjct: 1013 FTGSYCQHDV---------NECDSQPCLHGGTCQDGCGSYRCTCPQGYTGPNCQNLVHWC 1063
Query: 590 EDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS------------ERVSCAHFCF 637
+ SP C N G C + + C C +GW+G+ C + V A C
Sbjct: 1064 DSSP-----CKNGGKC-WQTHTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQ 1117
Query: 638 NGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
+GG C +D C C GY G C+ LV
Sbjct: 1118 HGGLC------VDAGNTHHCRCQAGYTGSYCEDLV 1146
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 223/562 (39%), Gaps = 135/562 (24%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPARTCYLDCNH 276
+ C PC A C++ P+++TC+C + T E+++ C P Y C
Sbjct: 529 VDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDE----CDPDPCH--YGSCKD 582
Query: 277 GNLPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCIC 333
G ++ TCLC T E N+ C P R + GTC+ D D C C
Sbjct: 583 GV--ATFTCLCRPGYTGHHCETNINE----CSSQPCR------HGGTCQ-DRDNAYLCFC 629
Query: 334 QENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE-- 388
+ G CE +N C PC + G C + Y+C C P YTG+ C I E
Sbjct: 630 LKGTTGPNCE-INLDDCASSPC-DSGTCLDKID----GYECACEPGYTGSMCNINIDECA 683
Query: 389 -NKCHNGGTCIATTQ--TCVCPPGFTGDTCQQCLNLKCQNG----GVCVNKTTGLECDCP 441
N CHNGGTC TC CP G+ TC +N +C + G C + G +CDC
Sbjct: 684 GNPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVN-ECNSNPCVHGACRDSLNGYKCDCD 742
Query: 442 KFYYGKNCQYS--QCK-NYCVNG-ECSITDSGPKCMCSPGYSGKKCDT------------ 485
+ G NC + +C+ N CVNG C SG C C G+SG C T
Sbjct: 743 PGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLN 802
Query: 486 -CTCLNGDSGPKCMCSPGYSGKKCDTCT-------CLNGGTCIPNS--KNNVCKCPSQYT 535
TC++ +G KC C Y+G C+ C NGG C + ++ C CP+ +
Sbjct: 803 QGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQ 862
Query: 536 GR---------------------------RCECAVG--DTSCASLANKCTPNYCSNNGTC 566
G+ RC C G +C + + C PN C N G+C
Sbjct: 863 GQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSC 922
Query: 567 VLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITC 626
C CLP + G C E + + + C N C+ CTC G+SGI C
Sbjct: 923 TDGINTAFCDCLPGFRGTFC-EEDINECASDPCRNGANCTDCVDSY-TCTCPAGFSGIHC 980
Query: 627 SERVS--CAHFCFNGGTCRE------------------QNYSLDPDLKPI---------- 656
CFNGGTC + Q+ + D +P
Sbjct: 981 ENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGC 1040
Query: 657 ----CICPRGYAGVRCQTLVHY 674
C CP+GY G CQ LVH+
Sbjct: 1041 GSYRCTCPQGYTGPNCQNLVHW 1062
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 168/411 (40%), Gaps = 86/411 (20%)
Query: 316 CNHGTCEFDDDFDPHCICQENFYGTYCEK--VNNSMCPCLNQGMCYP--DLTHPEPTYKC 371
C HG ++ C+C+ G CE+ V S PC N G C P D+TH +C
Sbjct: 189 CRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTH-----EC 243
Query: 372 HCAPSYTGARCESRICE---NKCHNGGTCI--ATTQTCVCPPGFTGDTCQ------QCLN 420
C P +TG CE I + N C NGG C+ T C CPP +TG C Q +
Sbjct: 244 ACLPGFTGQNCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMP 303
Query: 421 LKCQNGGVCVNKTTGLECDCPKFYYGKNCQ------------------------YSQCKN 456
CQNGG C N G C C + G++C Y +C +
Sbjct: 304 NACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFYCECPH 363
Query: 457 YCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKC----DTCT 512
C + D+ C+ +P G CDT +NG + C C GY+G C D C+
Sbjct: 364 GRTGLLCHLNDA---CISNPCNEGSNCDT-NPVNGKA--ICTCPSGYTGPACSQDVDECS 417
Query: 513 -----CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCV 567
C + G CI + C+C YTG RCE V N+C N C N+ TC+
Sbjct: 418 LGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDV---------NECVSNPCQNDATCL 468
Query: 568 LIEGKPSCKCLPPYSGKQCTERED----SPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSG 623
G+ C C+P Y G C D SP HN G C K + C C G++G
Sbjct: 469 DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHN-----GRC-LDKINEFQCECPTGFTG 522
Query: 624 ITCSERV-SCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
C V CA C NG C LD C+C GY G C+ +
Sbjct: 523 HLCQYDVDECASTPCKNGAKC------LDGPNTYTCVCTEGYTGTHCEVDI 567
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 185/465 (39%), Gaps = 82/465 (17%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
H+V N CD +PC C + S+ C CP T N + C +P + N
Sbjct: 1020 HDV-NECDSQPCLHGGTCQDGCGSYRCTCPQGYTGP-NCQNLVHWCDSSPCK------NG 1071
Query: 277 GNLPSSHT---CLCPDHLTEELNVTSGKMSCKVAPART---CYLDCNHGTCEFDDDFDPH 330
G +HT C CP T L +SC+VA R C HG D H
Sbjct: 1072 GKCWQTHTQYRCECPSGWTG-LYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHH 1130
Query: 331 CICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE 388
C CQ + G+YCE + + S PC N C L Y C C Y G C I E
Sbjct: 1131 CRCQAGYTGSYCEDLVDECSPSPCQNGATCTDYLG----GYSCKCVAGYHGVNCSEEIDE 1186
Query: 389 ---NKCHNGGTCI--ATTQTCVCPPGFTGDTCQQCLN------------LKCQNGGVCVN 431
+ C NGGTC+ T C CP G G C+ ++ KC N G CV+
Sbjct: 1187 CLSHPCQNGGTCLDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVD 1246
Query: 432 KTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNG 491
+ G C CP + G+ C+ N C++ C T C+
Sbjct: 1247 QVGGYSCTCPPGFVGERCEGD--VNECLSNPCDARG-----------------TQNCVQR 1287
Query: 492 DSGPKCMCSPGYSGKKCDTCT-------CLNGGTCIPNS---KNNVCKCPSQYTGRRCEC 541
+ C C G++G++C++ C NGGTC S + +CKCP+ + G CE
Sbjct: 1288 VNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCE- 1346
Query: 542 AVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSC-HNYCD 600
+ A C C N GTC+ P+C CL P++G +C SP N C
Sbjct: 1347 --------NDARTCGSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCY 1398
Query: 601 NAGLCSYSKQGKPV-CTCVNGWSGITCSERVSCAHFCFNGGTCRE 644
N G C + + C C ++G+ C + F GG R+
Sbjct: 1399 NQGTCEPTSESPFYRCLCPAKFNGLLC----HILDYSFGGGAGRD 1439
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 185/472 (39%), Gaps = 105/472 (22%)
Query: 281 SSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYGT 340
+ + C C + L +T +C P R N GTC+ + C C + G
Sbjct: 83 ADYACSCALGFSGPLCLTPLDNACLTNPCR------NGGTCDLLTLTEYKCRCPPGWSGK 136
Query: 341 YCEKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI------------- 386
C++ + + PC N G C P E +Y CHC PS+ G C +
Sbjct: 137 SCQQADPCASNPCANGGQCLPF----EASYICHCPPSFHGPTCRQDVNECGQKPGLCRHG 192
Query: 387 --CENK----------------------------CHNGGTCIAT---TQTCVCPPGFTGD 413
C N+ C NGGTC T T C C PGFTG
Sbjct: 193 GTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTHECACLPGFTGQ 252
Query: 414 TCQQ----CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNC--QYSQCK---NYCVN-GEC 463
C++ C C+NGG CV+ C CP + G+ C +C+ N C N G C
Sbjct: 253 NCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTC 312
Query: 464 SITDSGPKCMCSPGYSGKKC----DTC---------TCLNGDSGPKCMCSPGYSGKKC-- 508
T G C+C G++G+ C D C TC + + C C G +G C
Sbjct: 313 HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFYCECPHGRTGLLCHL 372
Query: 509 -DTCT---CLNGGTCIPNSKNN--VCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSN 562
D C C G C N N +C CPS YTG C V + S + N C +
Sbjct: 373 NDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGA-------NPCEH 425
Query: 563 NGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWS 622
G C+ G C+CL Y+G +C E + + N C N C + G+ C C+ G+
Sbjct: 426 AGKCINTLGSFECQCLQGYTGPRC-EIDVNECVSNPCQNDATC-LDQIGEFQCICMPGYE 483
Query: 623 GITCSERV-SCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
G+ C CA C + G C LD + C CP G+ G CQ V
Sbjct: 484 GVHCEVNTDECASSPCLHNGRC------LDKINEFQCECPTGFTGHLCQYDV 529
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 512 TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG 571
TCLNGG C + C C + G RC+ N C C N GTC +++
Sbjct: 30 TCLNGGKCEAANGTEACVCGGAFVGPRCQ----------DPNPCLSTPCKNAGTCHVVDR 79
Query: 572 KP----SCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS 627
+ +C C +SG C D+ N C N G C + C C GWSG +C
Sbjct: 80 RGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQ 139
Query: 628 ERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKK 678
+ CA + C NGG C S IC CP + G C+ V+ +K
Sbjct: 140 QADPCASNPCANGGQCLPFEASY------ICHCPPSFHGPTCRQDVNECGQK 185
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1
PE=1 SV=3
Length = 2531
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 198/512 (38%), Gaps = 94/512 (18%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLD----CNH 276
N C PC CI+ + + C CP L T +AP T C
Sbjct: 793 NECASNPCLNQGTCIDDVAGYKCNCP------LPYTGATCEVVLAPCATSPCKNSGVCKE 846
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
S +C+CP + +C+V C HG + + C+CQ
Sbjct: 847 SEDYESFSCVCPTGWQGQ--------TCEVDINECVKSPCRHGASCQNTNGSYRCLCQAG 898
Query: 337 FYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKC 391
+ G CE + PC N G C + T C C P + GA CE I E N C
Sbjct: 899 YTGRNCESDIDDCRPNPCHNGGSCTDGIN----TAFCDCLPGFQGAFCEEDINECASNPC 954
Query: 392 HNGGTCI--ATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYY 445
NG C + TC CP GF G C+ C C NGG CV+ C CP +
Sbjct: 955 QNGANCTDCVDSYTCTCPVGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFT 1014
Query: 446 GKNCQY--SQCKNY-CVNG-ECSITDSGPKCMCSPGYSG-------KKCDTCTCLNG--- 491
G CQY ++C + C++G C + KC C GY+G + CD+ C NG
Sbjct: 1015 GSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGRC 1074
Query: 492 ---DSGPKCMCSPGYSGKKCD-----------------TCTCLNGGTCIPNSKNNVCKCP 531
++ C C G++G CD T C +GG C+ + C C
Sbjct: 1075 WQTNTQYHCECRSGWTGVNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEGDKHYCHCQ 1134
Query: 532 SQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTERED 591
+ YTG CE V ++C+PN C N TC G SCKC+ Y G C+E E
Sbjct: 1135 AGYTGSYCEDEV---------DECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSE-EI 1184
Query: 592 SPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAH----------FCFNGGT 641
+ C N G C C+C G G+ C V H CFN GT
Sbjct: 1185 NECLSQPCQNGGTC-IDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGT 1243
Query: 642 CREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
C +Q C CP G+ G RC+ V+
Sbjct: 1244 CVDQVGGY------TCTCPPGFVGERCEGDVN 1269
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 200/477 (41%), Gaps = 83/477 (17%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG-- 277
T+ C PC + C++ + C CP L C+ C +G
Sbjct: 491 TDECASSPCLHNGHCMDKINEFQCQCPKGFNGHL--------CQYDVDECASTPCKNGAK 542
Query: 278 --NLPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCI 332
+ P+++TC+C + T E+++ C P Y C G F C+
Sbjct: 543 CLDGPNTYTCVCTEGYTGTHCEVDIDE----CDPDPCH--YGSCKDGVATFT------CL 590
Query: 333 CQENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--C 387
CQ + G +CE N + C PC + G C + +Y C C TG CE + C
Sbjct: 591 CQPGYTGHHCE-TNINECHSQPCRHGGTC----QDRDNSYLCLCLKGTTGPNCEINLDDC 645
Query: 388 ENKCHNGGTCIATTQ--TCVCPPGFTGDTC----QQCLNLKCQNGGVCVNKTTGLECDCP 441
+ + GTC+ C C PG+TG C +C C NGG C + G C CP
Sbjct: 646 ASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCP 705
Query: 442 KFYYGKNC--QYSQC-KNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCM 498
+ Y+ C + ++C N C++G C +G KC C+PG+SG CD
Sbjct: 706 EGYHDPTCLSEVNECNSNPCIHGACRDGLNGYKCDCAPGWSGTNCD-------------- 751
Query: 499 CSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPN 558
+ +C++ C+NGGTC + VC C ++G C+ + N+C N
Sbjct: 752 ----INNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNI---------NECASN 798
Query: 559 YCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPV-CTC 617
C N GTC+ C C PY+G C E +P + C N+G+C S+ + C C
Sbjct: 799 PCLNQGTCIDDVAGYKCNCPLPYTGATC-EVVLAPCATSPCKNSGVCKESEDYESFSCVC 857
Query: 618 VNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
GW G TC ++ C +G +C+ N S C+C GY G C++ +
Sbjct: 858 PTGWQGQTCEVDINECVKSPCRHGASCQNTNGSYR------CLCQAGYTGRNCESDI 908
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 164/383 (42%), Gaps = 59/383 (15%)
Query: 308 PARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMC-PCLNQGMCYPDLTHPE 366
P+ TC N G CE + + C+C F G C+ N + PC N G C+
Sbjct: 27 PSGTCL---NGGRCEVANGTEA-CVCSGAFVGQRCQDSNPCLSTPCKNAGTCHVVDHGGT 82
Query: 367 PTYKCHCAPSYTGARCESRI----CENKCHNGGTCIATTQT---CVCPPGFTGDTCQQ-- 417
Y C C ++G C + + N C NGGTC T T C CPPG++G +CQQ
Sbjct: 83 VDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD 142
Query: 418 -CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQY-----SQCKNYCVNGECSITDSGP- 470
C + C NGG C+ + C CP ++G C+ SQ C +G + G
Sbjct: 143 PCASNPCANGGQCLPFESSYICRCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEIGSY 202
Query: 471 KCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKN-NVCK 529
+C C ++G C+ P CSP C NGGTC P + C
Sbjct: 203 RCACRATHTGPHCEL---------PYVPCSPS---------PCQNGGTCRPTGDTTHECA 244
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
C + G+ CE V D C N C N G CV +C+C P ++G+ CTE
Sbjct: 245 CLPGFAGQNCEENVDD---------CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTED 295
Query: 590 EDSPSCH-NYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQN 646
D N C N G C ++ G C CVNGW+G CSE + + CF G TC ++
Sbjct: 296 VDECQLMPNACQNGGTC-HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRV 354
Query: 647 YSLDPDLKPICICPRGYAGVRCQ 669
S C CP G G+ C
Sbjct: 355 ASF------YCECPHGRTGLLCH 371
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 209/499 (41%), Gaps = 86/499 (17%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG--- 277
N C +PC C + +S+ CLC L T+G +C++ C+ G
Sbjct: 605 NECHSQPCRHGGTCQDRDNSYLCLC-------LKGTTGP-NCEINLDDCASNPCDSGTCL 656
Query: 278 NLPSSHTCLC-PDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
+ + C C P + NV + C +P N GTCE D C C E
Sbjct: 657 DKIDGYECACEPGYTGSMCNVNIDE--CAGSPCH------NGGTCE-DGIAGFTCRCPEG 707
Query: 337 FYGTYC-EKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCE--SRICE-NKC 391
++ C +VN + PC++ G C L YKC CAP ++G C+ + CE N C
Sbjct: 708 YHDPTCLSEVNECNSNPCIH-GACRDGLN----GYKCDCAPGWSGTNCDINNNECESNPC 762
Query: 392 HNGGTCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYY 445
NGGTC T C C GF+G CQ +C + C N G C++ G +C+CP Y
Sbjct: 763 VNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYT 822
Query: 446 GKNCQY-------SQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDT------------- 485
G C+ S CKN V E +S C+C G+ G+ C+
Sbjct: 823 GATCEVVLAPCATSPCKNSGVCKESEDYESF-SCVCPTGWQGQTCEVDINECVKSPCRHG 881
Query: 486 CTCLNGDSGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPNSKNNVCKCPSQYTGRR 538
+C N + +C+C GY+G+ C D C C NGG+C C C + G
Sbjct: 882 ASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAF 941
Query: 539 CECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSC-HN 597
CE + N+C N C N C +C C ++G C ++P C +
Sbjct: 942 CEEDI---------NECASNPCQNGANCTDCVDSYTCTCPVGFNGIHC--ENNTPDCTES 990
Query: 598 YCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKP 655
C N G C C C G++G C V+ + C +GGTC++ +
Sbjct: 991 SCFNGGTC-VDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYK----- 1044
Query: 656 ICICPRGYAGVRCQTLVHY 674
C CP+GY G+ CQ LV +
Sbjct: 1045 -CTCPQGYTGLNCQNLVRW 1062
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 193/488 (39%), Gaps = 89/488 (18%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
N T C + C C++ +S TCLCP T + +R C
Sbjct: 981 ENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYC----QYDVNECDSRPCLHGGTC 1036
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
+ ++ C CP T LN + C AP + N G C + + HC C+
Sbjct: 1037 QDSYGTYKCTCPQGYTG-LNCQNLVRWCDSAPCK------NGGRC-WQTNTQYHCECRSG 1088
Query: 337 FYGTYCEKVNNS------------MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384
+ G C+ ++ S C + G+C + + CHC YTG+ CE
Sbjct: 1089 WTGVNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEGD----KHYCHCQAGYTGSYCED 1144
Query: 385 RICE---NKCHNGGTCIATTQ--TCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTG 435
+ E N C NG TC +C C G+ G C + CL+ CQNGG C++ T
Sbjct: 1145 EVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNS 1204
Query: 436 LECDCPKFYYGKNCQY------------SQCKNYCVNGECSITDSGPKCMCSPGYSGKKC 483
+C CP+ G +C+ S+ NG C G C C PG+ G++C
Sbjct: 1205 YKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFVGERC 1264
Query: 484 --DTCTCLNGDSGPK-------------CMCSPGYSGKKCDTCT-------CLNGGTCIP 521
D CL+ P+ C C G++G++C++ C NGG C
Sbjct: 1265 EGDVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGGVCAV 1324
Query: 522 NS---KNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCL 578
S + +C+CP+ + G CE + A C C N GTC+ P+C CL
Sbjct: 1325 ASNTARGFICRCPAGFEGATCE---------NDARTCGSLRCLNGGTCISGPRSPTCLCL 1375
Query: 579 PPYSGKQCTEREDSPSC-HNYCDNAGLCSYSKQGKPV-CTCVNGWSGITCSERVSCAHFC 636
++G +C SP N C N G C + + C C ++G+ C +
Sbjct: 1376 GSFTGPECQFPASSPCVGSNPCYNQGTCEPTSENPFYRCLCPAKFNGLLC----HILDYS 1431
Query: 637 FNGGTCRE 644
F GG R+
Sbjct: 1432 FTGGAGRD 1439
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 158/381 (41%), Gaps = 67/381 (17%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMCP---CLNQGMCYPDLTHPEPTYKCHC 373
N GTC D C C F G CE+ N CP C N G C + TY C C
Sbjct: 229 NGGTCRPTGDTTHECACLPGFAGQNCEE-NVDDCPGNNCKNGGACVDGVN----TYNCRC 283
Query: 374 APSYTGARC-----ESRICENKCHNGGTCIAT--TQTCVCPPGFTGDTCQQ----CLNLK 422
P +TG C E ++ N C NGGTC T CVC G+TG+ C + C +
Sbjct: 284 PPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAA 343
Query: 423 CQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKK 482
C G C ++ C+CP G C + + C++ C + G C +P +GK
Sbjct: 344 CFQGATCHDRVASFYCECPHGRTGLLCHLN---DACISNPC---NEGSNCDTNP-VNGKA 396
Query: 483 CDTCTCLNGDSGPKCMCSPGYSGKKCDTCT-----CLNGGTCIPNSKNNVCKCPSQYTGR 537
CTC +G +GP C + D C C + G C+ + C+C YTG
Sbjct: 397 --ICTCPSGYTGPAC-------SQDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGP 447
Query: 538 RCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTERED----SP 593
RCE V N+C N C N+ TC+ G+ C C+P Y G C D SP
Sbjct: 448 RCEIDV---------NECISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSP 498
Query: 594 SCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNYSLDP 651
HN G C K + C C G++G C V CA C NG C LD
Sbjct: 499 CLHN-----GHC-MDKINEFQCQCPKGFNGHLCQYDVDECASTPCKNGAKC------LDG 546
Query: 652 DLKPICICPRGYAGVRCQTLV 672
C+C GY G C+ +
Sbjct: 547 PNTYTCVCTEGYTGTHCEVDI 567
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 159/399 (39%), Gaps = 81/399 (20%)
Query: 331 CICQENFYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES--RI 386
C+C F G+YC+ N PCL+ G C TYKC C YTG C++ R
Sbjct: 1007 CLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYG----TYKCTCPQGYTGLNCQNLVRW 1062
Query: 387 CENK-CHNGGTCIATTQT--CVCPPGFTGDTCQQC--------------LNLKCQNGGVC 429
C++ C NGG C T C C G+TG C + L CQ+GG+C
Sbjct: 1063 CDSAPCKNGGRCWQTNTQYHCECRSGWTGVNCDVLSVSCEVAAQKRGIDVTLLCQHGGLC 1122
Query: 430 VNKTTGLECDCPKFYYGKNCQ--YSQCK-NYCVNGE-CSITDSGPKCMCSPGYSGKKC-- 483
V++ C C Y G C+ +C N C NG C+ G C C GY G C
Sbjct: 1123 VDEGDKHYCHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSE 1182
Query: 484 -----------DTCTCLNGDSGPKCMCSPGYSGKKC----DTC-----------TCLNGG 517
+ TC++ + KC C G G C D C C N G
Sbjct: 1183 EINECLSQPCQNGGTCIDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNG 1242
Query: 518 TCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGT--CVLIEGKPSC 575
TC+ C CP + G RCE GD N+C N C GT CV C
Sbjct: 1243 TCVDQVGGYTCTCPPGFVGERCE---GDV------NECLSNPCDPRGTQNCVQRVNDFHC 1293
Query: 576 KCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSKQGKP--VCTCVNGWSGITCS--ERV 630
+C ++G++C + C C N G+C+ + +C C G+ G TC R
Sbjct: 1294 ECRAGHTGRRCESVING--CRGKPCKNGGVCAVASNTARGFICRCPAGFEGATCENDART 1351
Query: 631 SCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQ 669
+ C NGGTC + P C+C + G CQ
Sbjct: 1352 CGSLRCLNGGTC------ISGPRSPTCLCLGSFTGPECQ 1384
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 512 TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG 571
TCLNGG C + C C + G+RC+ +N C C N GTC +++
Sbjct: 30 TCLNGGRCEVANGTEACVCSGAFVGQRCQ----------DSNPCLSTPCKNAGTCHVVDH 79
Query: 572 KP----SCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS 627
+C C +SG C D+ N C N G C + C C GWSG +C
Sbjct: 80 GGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQ 139
Query: 628 ERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISK 677
+ CA + C NGG C S IC CP G+ G C+ V+ S+
Sbjct: 140 QADPCASNPCANGGQCLPFESSY------ICRCPPGFHGPTCRQDVNECSQ 184
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 197/512 (38%), Gaps = 94/512 (18%)
Query: 221 NHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLD----CNH 276
N C PC CI+ + + C CP L T +AP T C
Sbjct: 793 NECASNPCLNQGTCIDDVAGYKCNCP------LPYTGATCEVVLAPCATSPCKNSGVCKE 846
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
S +C+CP + +C++ C HG + + C+CQ
Sbjct: 847 SEDYESFSCVCPTGWQGQ--------TCEIDINECVKSPCRHGASCQNTNGSYRCLCQAG 898
Query: 337 FYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKC 391
+ G CE + PC N G C + C C P + GA CE I E N C
Sbjct: 899 YTGRNCESDIDDCRPNPCHNGGSCTDGVN----AAFCDCLPGFQGAFCEEDINECATNPC 954
Query: 392 HNGGTCI--ATTQTCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYY 445
NG C + TC CP GF G C+ C C NGG CV+ C CP +
Sbjct: 955 QNGANCTDCVDSYTCTCPTGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFT 1014
Query: 446 GKNCQY--SQCKNY-CVNG-ECSITDSGPKCMCSPGYSG-------KKCDTCTCLNG--- 491
G CQY ++C + C++G C + KC C GY+G + CD+ C NG
Sbjct: 1015 GSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGKC 1074
Query: 492 ---DSGPKCMCSPGYSGKKCD-----------------TCTCLNGGTCIPNSKNNVCKCP 531
++ C C G++G CD T C +GG C+ + C C
Sbjct: 1075 WQTNTQYHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEEDKHYCHCQ 1134
Query: 532 SQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTERED 591
+ YTG CE V ++C+PN C N TC G SCKC+ Y G C+E E
Sbjct: 1135 AGYTGSYCEDEV---------DECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSE-EI 1184
Query: 592 SPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAH----------FCFNGGT 641
+ C N G C C+C G G+ C V H CFN GT
Sbjct: 1185 NECLSQPCQNGGTC-IDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGT 1243
Query: 642 CREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
C +Q C CP G+ G RC+ V+
Sbjct: 1244 CVDQVGGY------TCTCPPGFVGERCEGDVN 1269
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 199/475 (41%), Gaps = 79/475 (16%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHG-- 277
T+ C PC + C++ + C CP + L C+ C +G
Sbjct: 491 TDECASSPCLHNGRCVDKINEFLCQCPKGFSGHL--------CQYDVDECASTPCKNGAK 542
Query: 278 --NLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLD-CNHGTCEFDDDFDPHCICQ 334
+ P+++TC+C TE T ++ C++ C G F C+CQ
Sbjct: 543 CLDGPNTYTCVC----TEGYTGTHCEVDIDECDPDPCHIGLCKDGVATFT------CLCQ 592
Query: 335 ENFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CEN 389
+ G +CE N + C PC + G C + Y C C TG CE + C +
Sbjct: 593 PGYTGHHCE-TNINECHSQPCRHGGTCQDRDNY----YLCLCLKGTTGPNCEINLDDCAS 647
Query: 390 KCHNGGTCIATTQ--TCVCPPGFTGDTC----QQCLNLKCQNGGVCVNKTTGLECDCPKF 443
+ GTC+ C C PG+TG C +C C NGG C + G C CP+
Sbjct: 648 NPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEG 707
Query: 444 YYGKNC--QYSQC-KNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCS 500
Y+ C + ++C N C++G C +G KC C+PG+SG CD
Sbjct: 708 YHDPTCLSEVNECNSNPCIHGACRDGLNGYKCDCAPGWSGTNCD---------------- 751
Query: 501 PGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYC 560
+ +C++ C+NGGTC + VC C ++G C+ + N+C N C
Sbjct: 752 --INNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNI---------NECASNPC 800
Query: 561 SNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPV-CTCVN 619
N GTC+ C C PY+G C E +P + C N+G+C S+ + C C
Sbjct: 801 LNQGTCIDDVAGYKCNCPLPYTGATC-EVVLAPCATSPCKNSGVCKESEDYESFSCVCPT 859
Query: 620 GWSGITCSERVS--CAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
GW G TC ++ C +G +C+ N S C+C GY G C++ +
Sbjct: 860 GWQGQTCEIDINECVKSPCRHGASCQNTNGSYR------CLCQAGYTGRNCESDI 908
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 166/385 (43%), Gaps = 63/385 (16%)
Query: 308 PARTCYLDCNHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMC-PCLNQGMCYPDLTHPE 366
P+ TC N G CE + + C+C F G C+ + + PC N G CY
Sbjct: 27 PSGTCL---NGGRCEVANGTE-ACVCSGAFVGQRCQDPSPCLSTPCKNAGTCYVVDHGGI 82
Query: 367 PTYKCHCAPSYTGARCESRIC----ENKCHNGGTCIATTQT---CVCPPGFTGDTCQQ-- 417
Y C C ++G C + + N C NGGTC T T C CPPG++G +CQQ
Sbjct: 83 VDYACSCPLGFSGPLCLTPLANACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD 142
Query: 418 -CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQY-----SQCKNYCVNGECSITDSGP- 470
C + C NGG C+ + C CP ++G C+ SQ C +G + G
Sbjct: 143 PCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEIGSY 202
Query: 471 KCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKN-NVCK 529
+C C ++G C+ P CSP C NGGTC P + C
Sbjct: 203 RCACRATHTGPHCEL---------PYVPCSPS---------PCQNGGTCRPTGDTTHECA 244
Query: 530 CPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589
C + G+ CE V D C N C N G CV +C+C P ++G+ CTE
Sbjct: 245 CLPGFAGQNCEENVDD---------CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTED 295
Query: 590 EDSPSCH---NYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CAHFCFNGGTCRE 644
D C N C NAG C ++ G C CVNGW+G CS+ + + CF G TC +
Sbjct: 296 VD--ECQLMPNACQNAGTC-HNSHGGYNCVCVNGWTGEDCSDNIDDCASAACFQGATCHD 352
Query: 645 QNYSLDPDLKPICICPRGYAGVRCQ 669
+ S C CP G G+ C
Sbjct: 353 RVASF------YCECPHGRTGLLCH 371
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 224/561 (39%), Gaps = 133/561 (23%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLD-CNHGN 278
+ C PC A C++ P+++TC+C TE T ++ C++ C G
Sbjct: 529 VDECASTPCKNGAKCLDGPNTYTCVC----TEGYTGTHCEVDIDECDPDPCHIGLCKDGV 584
Query: 279 LPSSHTCLCPDHLTE---ELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQE 335
++ TCLC T E N+ C P R + GTC+ D++ C+C +
Sbjct: 585 --ATFTCLCQPGYTGHHCETNINE----CHSQPCR------HGGTCQDRDNYY-LCLCLK 631
Query: 336 NFYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---N 389
G CE +N C PC + G C + Y+C C P YTG+ C I E +
Sbjct: 632 GTTGPNCE-INLDDCASNPC-DSGTCLDKID----GYECACEPGYTGSMCNVNIDECAGS 685
Query: 390 KCHNGGTCIATTQ--TCVCPPGFTGDTCQQCLNLKCQNG----GVCVNKTTGLECDCPKF 443
CHNGGTC TC CP G+ TC +N +C + G C + G +CDC
Sbjct: 686 PCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVN-ECNSNPCIHGACRDGLNGYKCDCAPG 744
Query: 444 YYGKNCQYS--QCK-NYCVNG-ECSITDSGPKCMCSPGYSGKKCDT-------------C 486
+ G NC + +C+ N CVNG C SG C C G+SG C T
Sbjct: 745 WSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQG 804
Query: 487 TCLNGDSGPKCMCSPGYSGKKCD-------TCTCLNGGTCIPNS--KNNVCKCPSQYTGR 537
TC++ +G KC C Y+G C+ T C N G C + ++ C CP+ + G+
Sbjct: 805 TCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKNSGVCKESEDYESFSCVCPTGWQGQ 864
Query: 538 RCE---------------------------CAVGDT--SCASLANKCTPNYCSNNGTCVL 568
CE C G T +C S + C PN C N G+C
Sbjct: 865 TCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTD 924
Query: 569 IEGKPSCKCLPPYSGKQCTEREDSPSCH-NYCDNAGLCSYSKQGKPVCTCVNGWSGITCS 627
C CLP + G C ED C N C N C+ CTC G++GI C
Sbjct: 925 GVNAAFCDCLPGFQGAFC--EEDINECATNPCQNGANCTDCVDSY-TCTCPTGFNGIHCE 981
Query: 628 ERVS--CAHFCFNGGTCREQNYSL------------------DPDLKPI----------- 656
CFNGGTC + S + D +P
Sbjct: 982 NNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYG 1041
Query: 657 ---CICPRGYAGVRCQTLVHY 674
C CP+GY G+ CQ LV +
Sbjct: 1042 TYKCTCPQGYTGLNCQNLVRW 1062
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 190/470 (40%), Gaps = 85/470 (18%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
N T C + C C++ +S TCLCP T + + +R C
Sbjct: 981 ENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTG----SYCQYDVNECDSRPCLHGGTC 1036
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
+ ++ C CP T LN + C AP + N G C + + HC C+
Sbjct: 1037 QDSYGTYKCTCPQGYTG-LNCQNLVRWCDSAPCK------NGGKC-WQTNTQYHCECRSG 1088
Query: 337 FYGTYCEKVNNS------------MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384
+ G C+ ++ S C + G+C + E + CHC YTG+ CE
Sbjct: 1089 WTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDE----EDKHYCHCQAGYTGSYCED 1144
Query: 385 RICE---NKCHNGGTCIATTQ--TCVCPPGFTGDTCQQ----CLNLKCQNGGVCVNKTTG 435
+ E N C NG TC +C C G+ G C + CL+ CQNGG C++ T
Sbjct: 1145 EVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNT 1204
Query: 436 LECDCPKFYYGKNCQY------------SQCKNYCVNGECSITDSGPKCMCSPGYSGKKC 483
+C CP+ G +C+ S+ NG C G C C PG+ G++C
Sbjct: 1205 YKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFVGERC 1264
Query: 484 --DTCTCLNGDSGPK-------------CMCSPGYSGKKCDTCT-------CLNGGTCIP 521
D CL+ P+ C C G++G++C++ C NGG C
Sbjct: 1265 EGDVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCRNGGVCAV 1324
Query: 522 NS---KNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCL 578
S + +C+CP+++ G CE + A C C N GTC+ P+C CL
Sbjct: 1325 ASNTARGFICRCPARFEGATCE---------NDARTCGSLRCLNGGTCISGPRSPTCLCL 1375
Query: 579 PPYSGKQCTEREDSPSC-HNYCDNAGLCSYSKQGKPV-CTCVNGWSGITC 626
++G +C SP N C N G C + + C C ++G+ C
Sbjct: 1376 GSFTGPECQFPASSPCVGSNPCYNQGTCEPTSESPFYRCLCPAKFNGLLC 1425
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 164/409 (40%), Gaps = 82/409 (20%)
Query: 316 CNHGTCEFDDDFDPHCICQENFYGTYCE--KVNNSMCPCLNQGMCYPDLTHPEPTYKCHC 373
C HG ++ C C+ G +CE V S PC N G C P + T++C C
Sbjct: 189 CRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTG---DTTHECAC 245
Query: 374 APSYTGARCESRICE---NKCHNGGTCI--ATTQTCVCPPGFTGDTCQ------QCLNLK 422
P + G CE + + N C NGG C+ T C CPP +TG C Q +
Sbjct: 246 LPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNA 305
Query: 423 CQNGGVCVNKTTGLECDCPKFYYGKNCQ------------------------YSQCKNYC 458
CQN G C N G C C + G++C Y +C +
Sbjct: 306 CQNAGTCHNSHGGYNCVCVNGWTGEDCSDNIDDCASAACFQGATCHDRVASFYCECPHGR 365
Query: 459 VNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKC----DTCT-- 512
C + D+ C+ +P G CDT +NG + C C GY+G C D C
Sbjct: 366 TGLLCHLNDA---CISNPCNEGSNCDT-NPVNGKA--ICTCPRGYTGPACSQDVDECALG 419
Query: 513 ---CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLI 569
C + G C+ + C+C YTG RCE V N+C N C N+ TC+
Sbjct: 420 ANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDV---------NECISNPCQNDATCLDQ 470
Query: 570 EGKPSCKCLPPYSGKQCTERED----SPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGIT 625
G+ C C+P Y G C D SP HN G C K + +C C G+SG
Sbjct: 471 IGEFQCICMPGYEGVYCEINTDECASSPCLHN-----GRC-VDKINEFLCQCPKGFSGHL 524
Query: 626 CSERV-SCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672
C V CA C NG C LD C+C GY G C+ +
Sbjct: 525 CQYDVDECASTPCKNGAKC------LDGPNTYTCVCTEGYTGTHCEVDI 567
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 158/399 (39%), Gaps = 81/399 (20%)
Query: 331 CICQENFYGTYCEKVNNS--MCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES--RI 386
C+C F G+YC+ N PCL+ G C TYKC C YTG C++ R
Sbjct: 1007 CLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYG----TYKCTCPQGYTGLNCQNLVRW 1062
Query: 387 CENK-CHNGGTCIATTQT--CVCPPGFTGDTCQQC--------------LNLKCQNGGVC 429
C++ C NGG C T C C G+TG C + L CQ+GG+C
Sbjct: 1063 CDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLC 1122
Query: 430 VNKTTGLECDCPKFYYGKNCQ--YSQCK-NYCVNGE-CSITDSGPKCMCSPGYSGKKC-- 483
V++ C C Y G C+ +C N C NG C+ G C C GY G C
Sbjct: 1123 VDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSE 1182
Query: 484 -----------DTCTCLNGDSGPKCMCSPGYSGKKC----DTC-----------TCLNGG 517
+ TC++ + KC C G G C D C C N G
Sbjct: 1183 EINECLSQPCQNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNG 1242
Query: 518 TCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGT--CVLIEGKPSC 575
TC+ C CP + G RCE GD N+C N C GT CV C
Sbjct: 1243 TCVDQVGGYTCTCPPGFVGERCE---GDV------NECLSNPCDPRGTQNCVQRVNDFHC 1293
Query: 576 KCLPPYSGKQCTEREDSPSCHNY-CDNAGLCSYSKQGKP--VCTCVNGWSGITCS--ERV 630
+C ++G++C + C C N G+C+ + +C C + G TC R
Sbjct: 1294 ECRAGHTGRRCESVING--CRGKPCRNGGVCAVASNTARGFICRCPARFEGATCENDART 1351
Query: 631 SCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQ 669
+ C NGGTC + P C+C + G CQ
Sbjct: 1352 CGSLRCLNGGTC------ISGPRSPTCLCLGSFTGPECQ 1384
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 512 TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG 571
TCLNGG C + C C + G+RC+ D S C C N GTC +++
Sbjct: 30 TCLNGGRCEVANGTEACVCSGAFVGQRCQ----DPS------PCLSTPCKNAGTCYVVDH 79
Query: 572 KP----SCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS 627
+C C +SG C + N C N G C + C C GWSG +C
Sbjct: 80 GGIVDYACSCPLGFSGPLCLTPLANACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQ 139
Query: 628 ERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISK 677
+ CA + C NGG C S IC CP G+ G C+ V+ S+
Sbjct: 140 QADPCASNPCANGGQCLPFESSY------ICGCPPGFHGPTCRQDVNECSQ 184
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 179/409 (43%), Gaps = 67/409 (16%)
Query: 317 NHGTCEFDDDFDPHCICQENFYGTYCEKVNNSMC--PCLNQGMCYPDLTHPEPTYKCHCA 374
N GTC C C++ + G CE+ ++ PC N G C Y+CHCA
Sbjct: 305 NGGTCSNTGPDKYQCSCEDGYSGVNCERAEHACLSNPCANGGTC----KETSQGYECHCA 360
Query: 375 PSYTGARCESRICE---NKCHNGGTC--IATTQTCVCPPGFTGDTCQ----QCLNLKCQN 425
++G CE + + N+C +GGTC + C CPP +TG TCQ +C + C N
Sbjct: 361 IGWSGTSCEINVDDCTPNQCKHGGTCQDLVNGFKCACPPHWTGKTCQIDANECEDKPCVN 420
Query: 426 GGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKNYCVN-GECSITDSGPKCMCSPGYSGKK 482
C N C+C + G+NC + CK C+N G C +G +C+C PGY+G++
Sbjct: 421 AKSCHNLIGAYFCECLPGWSGQNCDININDCKGQCLNGGTCKDLVNGYRCLCPPGYTGEQ 480
Query: 483 C----DTCT---CLNGD------SGPKCMCSPGYSGKKC----DTCT---CLNGGTCIPN 522
C D C CLNG +G +C+C G+SG+ C D C C NG C
Sbjct: 481 CEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCKPNPCQNGAQCFNL 540
Query: 523 SKNNVCKCPSQYTGRRC----------ECAVGDTSCASLANKCTP--------NYCSNNG 564
+ + CKCP Y G+ C C V D+ ++A+ TP N C +G
Sbjct: 541 ASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPEGVRYISSNVCGPHG 600
Query: 565 TC-VLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSG 623
C G+ +C+C + G C E + N C N G C K C C +GW G
Sbjct: 601 RCRSQAGGQFTCECQEGFRGTYCHENINDCE-SNPCRNGGTC-IDKVNVYQCICADGWEG 658
Query: 624 ITCSERVSCAHF--CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670
+ C + C N G C++ L D C C G+ G C +
Sbjct: 659 VHCEINIDDCSLNPCLNKGACQD----LVNDF--YCECRNGWKGKTCHS 701
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 195/520 (37%), Gaps = 138/520 (26%)
Query: 220 TNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNL 279
+ C C C +L + C CP H T +TC +D N
Sbjct: 372 VDDCTPNQCKHGGTCQDLVNGFKCACPPHWT----------------GKTCQIDANE--- 412
Query: 280 PSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQENFYG 339
C D A++C+ CE C + G
Sbjct: 413 -------CEDK--------------PCVNAKSCHNLIGAYFCE----------CLPGWSG 441
Query: 340 TYCE-KVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NKCHNGG 395
C+ +N+ CLN G C DL + Y+C C P YTG +CE + E + C NGG
Sbjct: 442 QNCDININDCKGQCLNGGTC-KDLVN---GYRCLCPPGYTGEQCEKDVDECASSPCLNGG 497
Query: 396 TCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNC 449
C C+CP GF+G CQ C CQNG C N + C CP Y GKNC
Sbjct: 498 RCQDEVNGFQCLCPAGFSGQLCQLDIDYCKPNPCQNGAQCFNLASDYFCKCPDDYEGKNC 557
Query: 450 QYSQCKNYCVNGECSITDS----------------------GPK------------CMCS 475
S K++C C + DS GP C C
Sbjct: 558 --SHLKDHCRTTSCQVIDSCTVAVASNSTPEGVRYISSNVCGPHGRCRSQAGGQFTCECQ 615
Query: 476 PGYSGKKC-------------DTCTCLNGDSGPKCMCSPGYSGKKC----DTCT---CLN 515
G+ G C + TC++ + +C+C+ G+ G C D C+ CLN
Sbjct: 616 EGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVHCEINIDDCSLNPCLN 675
Query: 516 GGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSC 575
G C + C+C + + G+ +C S ++C C+N GTC C
Sbjct: 676 KGACQDLVNDFYCECRNGWKGK---------TCHSRDSQCDEATCNNGGTCHDEGDTFKC 726
Query: 576 KCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVS--CA 633
+C P + G C ++S N C+N G C + C C GW G TC+E +
Sbjct: 727 RCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFN-CVCKEGWEGSTCTENTNDCNP 785
Query: 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673
H C+N GTC +D + C C G+AG C+ ++
Sbjct: 786 HPCYNSGTC------VDGENWYRCECAPGFAGPDCRININ 819
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 152/387 (39%), Gaps = 64/387 (16%)
Query: 214 KQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLD 273
+Q + C PC C + + CLCP + +L ++ C
Sbjct: 479 EQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQL----CQLDIDYCKPNPCQNG 534
Query: 274 CNHGNLPSSHTCLCPD--------HLTEELNVTSGKM--SCKVA------PARTCYLDCN 317
NL S + C CPD HL + TS ++ SC VA P Y+ N
Sbjct: 535 AQCFNLASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPEGVRYISSN 594
Query: 318 ----HGTCEFDDDFDPHCICQENFYGTYC-EKVNN-SMCPCLNQGMCYPDLTHPEPTYKC 371
HG C C CQE F GTYC E +N+ PC N G C + Y+C
Sbjct: 595 VCGPHGRCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVN----VYQC 650
Query: 372 HCAPSYTGARCESRICE---NKCHNGGTC--IATTQTCVCPPGFTGDTCQ----QCLNLK 422
CA + G CE I + N C N G C + C C G+ G TC QC
Sbjct: 651 ICADGWEGVHCEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEAT 710
Query: 423 CQNGGVCVNKTTGLECDCPKFYYGKNCQYSQ----CKNYCVN-GECSITDSGPKCMCSPG 477
C NGG C ++ +C C + G C ++ N C N G C + C+C G
Sbjct: 711 CNNGGTCHDEGDTFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVCKEG 770
Query: 478 YSGKKC-------------DTCTCLNGDSGPKCMCSPGYSG-------KKCDTCTCLNGG 517
+ G C ++ TC++G++ +C C+PG++G +C + C G
Sbjct: 771 WEGSTCTENTNDCNPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGS 830
Query: 518 TCIPNSKNNVCKCPSQYTGRRCECAVG 544
TC+ C CP G C+ VG
Sbjct: 831 TCVDEINGYRCLCPPGRIGPDCQEVVG 857
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 153/364 (42%), Gaps = 61/364 (16%)
Query: 334 QENFYGTY-CEKVNNSMC------PCLNQGMCYPDLTHPEPTYK----CHCAPSYTGARC 382
++ F+G Y C++ N C P N +C + + K C C + G C
Sbjct: 200 RDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHGSCKQPGGCKCLYGWQGPYC 259
Query: 383 ESRICENKCHNGGTCIATTQTCVCPPGFTGDTCQQCLNL-----KCQNGGVCVNK-TTGL 436
+ I C +G TC+ Q C+C + G C + LN C NGG C N
Sbjct: 260 DKCIPHPGCVHG-TCVEPWQ-CLCDTNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKY 317
Query: 437 ECDCPKFYYGKNCQYSQ---CKNYCVNG-ECSITDSGPKCMCSPGYSGKKCDTCTCLNGD 492
+C C Y G NC+ ++ N C NG C T G +C C+ G+SG C+ +N D
Sbjct: 318 QCSCEDGYSGVNCERAEHACLSNPCANGGTCKETSQGYECHCAIGWSGTSCE----INVD 373
Query: 493 SGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLA 552
C+P C +GGTC C CP +TG+ C+ A
Sbjct: 374 D-----CTPN---------QCKHGGTCQDLVNGFKCACPPHWTGKTCQID---------A 410
Query: 553 NKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGK 612
N+C C N +C + G C+CLP +SG+ C + C C N G C G
Sbjct: 411 NECEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININD--CKGQCLNGGTCKDLVNGY 468
Query: 613 PVCTCVNGWSGITCSERV-SCAHF-CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670
C C G++G C + V CA C NGG C+++ C+CP G++G CQ
Sbjct: 469 -RCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQ------CLCPAGFSGQLCQL 521
Query: 671 LVHY 674
+ Y
Sbjct: 522 DIDY 525
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 110/287 (38%), Gaps = 37/287 (12%)
Query: 217 HNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNH 276
H N C+ PC CI+ + + C+C D E ++ C + P N
Sbjct: 624 HENINDCESNPCRNGGTCIDKVNVYQCICADGW-EGVHCEINIDDCSLNPCL------NK 676
Query: 277 GNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHCICQEN 336
G L D E N GK +C ++ CN+G D+ C C
Sbjct: 677 GACQD----LVNDFYCECRNGWKGK-TCHSRDSQCDEATCNNGGTCHDEGDTFKCRCSPG 731
Query: 337 FYGTYCEKVNNSMC---PCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE---NK 390
+ G C NS C PC N G C + ++ C C + G+ C + +
Sbjct: 732 WEGATCNIAKNSSCLPNPCENGGTCVVNGD----SFNCVCKEGWEGSTCTENTNDCNPHP 787
Query: 391 CHNGGTCIATTQ--TCVCPPGFTGDTCQ----QCLNLKCQNGGVCVNKTTGLECDCPKFY 444
C+N GTC+ C C PGF G C+ +C + C G CV++ G C CP
Sbjct: 788 CYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGSTCVDEINGYRCLCPPGR 847
Query: 445 YGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNG 491
G +CQ + NG+ +T G K + C+ C C NG
Sbjct: 848 IGPDCQEVVGRPCIANGQ--VTADGAKWE-------EDCNICQCQNG 885
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 73/268 (27%)
Query: 212 ENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCY 271
+ K H+ + CD+ C+ C + + C C +C +A +C
Sbjct: 695 KGKTCHSRDSQCDEATCNNGGTCHDEGDTFKCRCSPGWE--------GATCNIAKNSSC- 745
Query: 272 LDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHC 331
LP+ C+ N GTC + D +C
Sbjct: 746 -------LPN---------------------PCE-----------NGGTCVVNGD-SFNC 765
Query: 332 ICQENFYGTYCEKVNN--SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICE- 388
+C+E + G+ C + N + PC N G C E Y+C CAP + G C I E
Sbjct: 766 VCKEGWEGSTCTENTNDCNPHPCYNSGTC----VDGENWYRCECAPGFAGPDCRININEC 821
Query: 389 --NKCHNGGTCIATTQ--TCVCPPGFTGDTCQQCLNLKC-QNGGVCVNKTTGLECDCPKF 443
+ C G TC+ C+CPPG G CQ+ + C NG V +
Sbjct: 822 QSSPCAFGSTCVDEINGYRCLCPPGRIGPDCQEVVGRPCIANGQVTADGAK--------- 872
Query: 444 YYGKNCQYSQCKNYCVNGECSITDSGPK 471
+ ++C QC+N ++ C++ GPK
Sbjct: 873 -WEEDCNICQCQNGRIH--CTMMWCGPK 897
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 297,895,349
Number of Sequences: 539616
Number of extensions: 13942298
Number of successful extensions: 56407
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 807
Number of HSP's that attempted gapping in prelim test: 26119
Number of HSP's gapped (non-prelim): 9301
length of query: 713
length of database: 191,569,459
effective HSP length: 125
effective length of query: 588
effective length of database: 124,117,459
effective search space: 72981065892
effective search space used: 72981065892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)