Query psy6570
Match_columns 713
No_of_seqs 586 out of 3937
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 21:31:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sov_A LRP-6, low-density lipo 100.0 7.5E-38 2.6E-42 325.3 30.8 242 1-250 51-299 (318)
2 3p5b_L Low density lipoprotein 100.0 1.1E-37 3.8E-42 335.2 29.9 244 1-250 128-388 (400)
3 3m0c_C LDL receptor, low-densi 100.0 1.7E-37 5.9E-42 356.9 31.4 253 1-261 440-709 (791)
4 3v64_C Agrin; beta propeller, 100.0 3.2E-37 1.1E-41 325.7 28.8 242 1-250 89-334 (349)
5 1ijq_A LDL receptor, low-densi 100.0 9.2E-37 3.1E-41 318.1 31.4 244 1-250 46-306 (316)
6 3v65_B Low-density lipoprotein 100.0 1.1E-36 3.9E-41 326.1 30.3 244 1-250 132-377 (386)
7 3s94_A LRP-6, low-density lipo 100.0 2.3E-36 7.9E-41 341.3 28.5 243 1-251 365-609 (619)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 5E-36 1.7E-40 338.8 29.7 248 1-261 53-305 (628)
9 3s94_A LRP-6, low-density lipo 100.0 4.7E-36 1.6E-40 338.8 27.8 243 1-251 56-305 (619)
10 4a0p_A LRP6, LRP-6, low-densit 100.0 3.7E-35 1.3E-39 331.7 26.6 245 1-250 356-610 (628)
11 1n7d_A LDL receptor, low-densi 100.0 3E-34 1E-38 329.2 19.8 244 1-250 422-682 (699)
12 3v64_C Agrin; beta propeller, 99.9 8.4E-26 2.9E-30 238.3 25.0 204 6-215 52-259 (349)
13 3v65_B Low-density lipoprotein 99.9 1.3E-25 4.4E-30 240.3 25.6 204 6-215 95-302 (386)
14 3p5b_L Low density lipoprotein 99.9 4.2E-25 1.4E-29 237.2 25.2 204 6-215 91-304 (400)
15 3m0c_C LDL receptor, low-densi 99.9 5E-25 1.7E-29 253.5 26.6 204 6-215 403-616 (791)
16 3sov_A LRP-6, low-density lipo 99.9 4.5E-25 1.5E-29 229.1 21.9 204 6-215 12-222 (318)
17 1ijq_A LDL receptor, low-densi 99.9 3.4E-24 1.2E-28 223.0 27.4 204 6-215 9-222 (316)
18 1npe_A Nidogen, entactin; glyc 99.9 2E-24 6.7E-29 219.4 24.9 207 1-213 52-262 (267)
19 1npe_A Nidogen, entactin; glyc 99.9 7.3E-22 2.5E-26 200.4 23.0 198 6-210 9-217 (267)
20 1n7d_A LDL receptor, low-densi 99.9 1.2E-22 4E-27 233.1 15.4 204 6-215 385-598 (699)
21 2ygq_A WIF-1, WNT inhibitory f 99.8 2.9E-21 9.8E-26 198.5 8.5 160 306-485 145-308 (324)
22 4fbr_A Lectin, myxobacterial h 99.8 1.5E-24 5.2E-29 210.4 -18.2 239 329-624 13-265 (267)
23 2ygq_A WIF-1, WNT inhibitory f 99.8 3.1E-20 1.1E-24 190.8 9.7 166 337-542 141-309 (324)
24 4fbr_A Lectin, myxobacterial h 99.8 8.2E-24 2.8E-28 205.3 -21.8 246 233-537 5-265 (267)
25 3s25_A Hypothetical 7-bladed b 99.8 4E-18 1.4E-22 174.5 18.2 172 4-196 126-299 (302)
26 1z1y_A Ookinete surface protei 99.8 4.8E-20 1.6E-24 175.2 1.6 146 509-674 9-179 (186)
27 2vj2_A Jagged-1; signalling, p 99.8 2.9E-19 1E-23 166.2 5.4 145 402-587 17-168 (169)
28 2vj2_A Jagged-1; signalling, p 99.8 3.9E-19 1.3E-23 165.4 5.7 144 328-484 16-168 (169)
29 2vj3_A Neurogenic locus notch 99.7 5E-18 1.7E-22 151.9 11.4 116 506-633 6-125 (135)
30 2vj3_A Neurogenic locus notch 99.7 7.7E-18 2.6E-22 150.7 11.9 118 552-678 5-127 (135)
31 3tc9_A Hypothetical hydrolase; 99.7 5.9E-17 2E-21 175.3 20.8 185 2-190 155-371 (430)
32 1z1y_A Ookinete surface protei 99.7 1.6E-19 5.3E-24 171.7 0.2 141 458-628 13-175 (186)
33 4hw6_A Hypothetical protein, I 99.7 2.4E-16 8.1E-21 170.6 21.8 186 1-190 157-374 (433)
34 3fcs_B Integrin beta-3; beta p 99.7 1.2E-17 4.1E-22 186.3 10.7 124 512-671 494-629 (690)
35 4d90_A EGF-like repeat and dis 99.7 8.3E-17 2.8E-21 146.0 10.2 114 553-673 1-136 (143)
36 3tc9_A Hypothetical hydrolase; 99.7 9.4E-16 3.2E-20 165.9 20.1 177 9-189 207-429 (430)
37 4hw6_A Hypothetical protein, I 99.7 2E-15 6.9E-20 163.2 21.5 163 22-189 224-432 (433)
38 3hrp_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 160.6 23.2 184 1-191 146-355 (409)
39 3kya_A Putative phosphatase; s 99.7 2.3E-15 7.8E-20 162.3 21.0 181 8-192 222-477 (496)
40 4d90_A EGF-like repeat and dis 99.7 1.4E-16 4.7E-21 144.6 9.7 118 507-629 2-134 (143)
41 3hrp_A Uncharacterized protein 99.7 7E-15 2.4E-19 158.2 23.7 173 8-188 195-408 (409)
42 3fvz_A Peptidyl-glycine alpha- 99.6 1.2E-14 4E-19 152.0 22.7 199 7-211 69-301 (329)
43 2wg3_C Hedgehog-interacting pr 99.6 4.1E-15 1.4E-19 160.8 19.0 294 26-385 69-456 (463)
44 3kya_A Putative phosphatase; s 99.6 1.4E-14 4.8E-19 156.2 21.3 184 4-190 159-410 (496)
45 1rwi_B Serine/threonine-protei 99.6 1.9E-14 6.5E-19 145.3 19.3 199 2-210 41-242 (270)
46 3fcs_B Integrin beta-3; beta p 99.6 2.8E-15 9.5E-20 167.3 13.1 159 279-460 440-637 (690)
47 1q7f_A NHL, brain tumor CG1071 99.6 9.6E-14 3.3E-18 141.6 22.3 183 2-190 46-238 (286)
48 3fvz_A Peptidyl-glycine alpha- 99.6 7.7E-14 2.6E-18 145.7 22.0 173 22-197 20-234 (329)
49 2wg3_C Hedgehog-interacting pr 99.6 2.4E-14 8.2E-19 154.8 17.9 153 18-178 6-242 (463)
50 1rwi_B Serine/threonine-protei 99.6 2.8E-14 9.4E-19 144.1 17.2 177 6-191 86-265 (270)
51 2gy5_A Angiopoietin-1 receptor 99.6 9.6E-16 3.3E-20 163.0 6.5 179 322-542 132-321 (423)
52 3s25_A Hypothetical 7-bladed b 99.6 5.9E-14 2E-18 143.6 18.6 175 6-198 87-263 (302)
53 3g4e_A Regucalcin; six bladed 99.6 1E-13 3.5E-18 142.5 20.0 201 1-210 29-249 (297)
54 2fp8_A Strictosidine synthase; 99.6 7.4E-14 2.5E-18 145.4 18.7 180 2-190 35-269 (322)
55 3k6s_B Integrin beta-2; cell r 99.5 1.2E-14 4.2E-19 161.5 9.6 111 512-644 483-608 (687)
56 2p4o_A Hypothetical protein; p 99.5 2.3E-13 7.9E-18 140.5 16.7 200 1-210 47-263 (306)
57 2qc5_A Streptogramin B lactona 99.5 1.3E-12 4.3E-17 133.7 21.9 178 3-189 79-259 (300)
58 1q7f_A NHL, brain tumor CG1071 99.5 1.4E-12 4.7E-17 133.0 20.6 174 6-188 99-278 (286)
59 2qc5_A Streptogramin B lactona 99.5 2.2E-12 7.7E-17 131.8 21.3 178 3-189 37-217 (300)
60 2fp8_A Strictosidine synthase; 99.5 8.9E-13 3E-17 137.1 17.9 177 8-189 102-312 (322)
61 2gy5_A Angiopoietin-1 receptor 99.5 8.5E-14 2.9E-18 148.0 9.4 174 329-539 185-381 (423)
62 2z2n_A Virginiamycin B lyase; 99.4 5.4E-12 1.9E-16 128.9 21.3 177 4-189 75-254 (299)
63 3dr2_A Exported gluconolactona 99.4 4.7E-12 1.6E-16 130.6 20.7 179 1-190 61-267 (305)
64 3dsm_A Uncharacterized protein 99.4 6.3E-12 2.2E-16 131.1 21.2 201 2-215 100-325 (328)
65 2bou_A EGF-like module contain 99.4 1.2E-13 4.1E-18 124.8 6.9 109 511-627 7-133 (143)
66 1yo8_A Thrombospondin-2; EGF, 99.4 2.3E-13 8E-18 149.4 9.9 118 506-633 4-154 (634)
67 2bou_A EGF-like module contain 99.4 1.3E-13 4.4E-18 124.7 5.9 101 558-671 7-135 (143)
68 2z2n_A Virginiamycin B lyase; 99.4 1.3E-11 4.5E-16 126.0 21.7 176 4-188 33-211 (299)
69 2ism_A Putative oxidoreductase 99.4 8.2E-12 2.8E-16 131.3 19.3 182 7-192 51-299 (352)
70 3e5z_A Putative gluconolactona 99.4 3.5E-11 1.2E-15 123.3 23.5 193 2-209 45-263 (296)
71 2p4o_A Hypothetical protein; p 99.4 3.9E-11 1.3E-15 123.7 23.0 157 26-190 32-198 (306)
72 3k6s_B Integrin beta-2; cell r 99.4 4.4E-13 1.5E-17 149.1 7.5 137 509-670 433-592 (687)
73 4aqs_A Laminin subunit beta-1; 99.4 5.5E-13 1.9E-17 147.5 8.2 58 470-540 407-474 (525)
74 1yo8_A Thrombospondin-2; EGF, 99.3 8E-13 2.7E-17 145.2 7.8 113 552-670 3-146 (634)
75 3a9g_A Putative uncharacterize 99.3 4.4E-11 1.5E-15 125.6 20.5 182 7-191 49-297 (354)
76 4aqs_A Laminin subunit beta-1; 99.3 8.5E-13 2.9E-17 146.0 7.7 91 573-670 418-525 (525)
77 1dx5_I Thrombomodulin; serine 99.3 3.6E-13 1.2E-17 116.8 2.8 100 551-666 3-111 (118)
78 1uzk_A Fibrillin-1; glycoprote 99.3 8.1E-14 2.8E-18 128.8 -2.5 127 507-667 5-156 (162)
79 2ism_A Putative oxidoreductase 99.3 9E-11 3.1E-15 123.3 20.4 156 17-182 22-225 (352)
80 1uzk_A Fibrillin-1; glycoprote 99.3 1.3E-13 4.6E-18 127.4 -1.6 127 417-585 5-156 (162)
81 3a9g_A Putative uncharacterize 99.3 4.5E-11 1.5E-15 125.5 17.5 159 18-187 21-228 (354)
82 2qe8_A Uncharacterized protein 99.3 5.8E-11 2E-15 124.5 18.3 181 24-210 65-299 (343)
83 3dsm_A Uncharacterized protein 99.3 4.3E-10 1.5E-14 117.1 23.2 195 3-210 60-275 (328)
84 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-10 4.1E-15 120.0 18.7 199 3-209 42-275 (314)
85 1tpg_A T-plasminogen activator 99.2 5.9E-12 2E-16 103.2 5.9 82 495-588 2-86 (91)
86 2ghs_A AGR_C_1268P; regucalcin 99.2 4.9E-10 1.7E-14 116.5 21.9 198 2-210 66-279 (326)
87 3sre_A PON1, serum paraoxonase 99.2 1.2E-10 4.2E-15 120.7 16.9 176 5-189 81-297 (355)
88 2dg1_A DRP35, lactonase; beta 99.2 4.9E-10 1.7E-14 116.6 21.7 182 2-189 61-262 (333)
89 3e5z_A Putative gluconolactona 99.2 8.3E-10 2.9E-14 112.9 22.2 160 17-189 19-201 (296)
90 3qqz_A Putative uncharacterize 99.2 1.8E-09 6.2E-14 106.5 22.7 181 5-190 47-253 (255)
91 3dr2_A Exported gluconolactona 99.2 7.2E-10 2.5E-14 114.0 20.5 162 17-191 36-225 (305)
92 1dx5_I Thrombomodulin; serine 99.2 4.2E-12 1.4E-16 110.1 2.6 101 506-624 5-111 (118)
93 2qe8_A Uncharacterized protein 99.2 4E-10 1.4E-14 118.1 17.4 173 6-183 92-314 (343)
94 2g8s_A Glucose/sorbosone dehyd 99.2 2.3E-10 7.9E-15 120.1 15.3 157 17-181 9-219 (353)
95 3vgz_A Uncharacterized protein 99.2 4.5E-09 1.5E-13 109.8 24.5 188 6-197 68-269 (353)
96 3vgz_A Uncharacterized protein 99.2 4.1E-09 1.4E-13 110.1 24.0 187 3-197 107-310 (353)
97 3das_A Putative oxidoreductase 99.1 1.2E-09 4.1E-14 112.8 18.8 160 19-187 25-232 (347)
98 1tpg_A T-plasminogen activator 99.1 2.8E-11 9.5E-16 99.2 5.2 83 293-385 1-87 (91)
99 2p9w_A MAL S 1 allergenic prot 99.1 2.5E-09 8.4E-14 108.1 20.0 189 1-192 29-267 (334)
100 2w86_A Fibrillin-1, fibrillin1 99.1 1.7E-12 5.9E-17 117.7 -2.8 128 417-585 6-141 (147)
101 3qqz_A Putative uncharacterize 99.1 1.8E-08 6.3E-13 99.3 23.7 182 26-213 27-235 (255)
102 2g8s_A Glucose/sorbosone dehyd 99.1 1.4E-09 4.7E-14 114.2 16.5 184 6-191 38-309 (353)
103 3das_A Putative oxidoreductase 99.1 5.7E-09 2E-13 107.7 20.7 205 3-212 49-318 (347)
104 2p9w_A MAL S 1 allergenic prot 99.1 7.9E-09 2.7E-13 104.4 21.0 161 22-189 9-214 (334)
105 3g4e_A Regucalcin; six bladed 99.1 3.1E-09 1.1E-13 108.8 18.5 154 21-188 8-178 (297)
106 1cru_A Protein (soluble quinop 99.1 3E-09 1E-13 115.2 17.9 157 17-181 18-249 (454)
107 2iwa_A Glutamine cyclotransfer 99.0 3E-08 1E-12 98.3 23.1 174 6-190 43-237 (266)
108 2w86_A Fibrillin-1, fibrillin1 99.0 7.4E-12 2.5E-16 113.6 -2.7 108 552-667 4-141 (147)
109 2dg1_A DRP35, lactonase; beta 99.0 1.1E-08 3.8E-13 106.2 20.8 160 20-189 39-212 (333)
110 1aut_L Activated protein C; se 99.0 2.2E-10 7.6E-15 98.5 6.1 88 552-644 6-108 (114)
111 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 5.9E-09 2E-13 107.1 17.6 175 7-189 92-298 (314)
112 3u4y_A Uncharacterized protein 99.0 2.4E-08 8.1E-13 103.4 22.3 186 2-193 15-210 (331)
113 2iwa_A Glutamine cyclotransfer 99.0 1.5E-08 5.2E-13 100.5 19.4 166 26-199 21-190 (266)
114 3u4y_A Uncharacterized protein 99.0 3.7E-08 1.3E-12 102.0 22.1 179 4-191 59-253 (331)
115 1klo_A Laminin; glycoprotein; 99.0 4.1E-10 1.4E-14 103.1 5.4 76 395-507 68-155 (162)
116 1ri6_A Putative isomerase YBHE 99.0 8.7E-08 3E-12 99.3 24.0 207 5-216 104-337 (343)
117 3scy_A Hypothetical bacterial 99.0 6.2E-08 2.1E-12 101.8 23.0 160 27-191 156-340 (361)
118 1emn_A Fibrillin; extracellula 99.0 5.2E-10 1.8E-14 89.7 5.1 68 552-625 5-77 (82)
119 1x7a_L Coagulation factor IX, 99.0 4.2E-10 1.4E-14 101.2 4.9 74 552-631 48-129 (146)
120 3hfq_A Uncharacterized protein 98.9 1.1E-07 3.8E-12 99.2 21.6 156 27-187 142-314 (347)
121 3hfq_A Uncharacterized protein 98.9 9.8E-08 3.4E-12 99.6 21.1 179 6-189 62-270 (347)
122 1l0q_A Surface layer protein; 98.9 1.6E-07 5.6E-12 99.5 23.0 183 2-193 7-192 (391)
123 2p28_B Integrin beta-2; hybrid 98.9 1.1E-09 3.9E-14 104.4 5.0 97 557-672 95-216 (217)
124 1klo_A Laminin; glycoprotein; 98.9 1.1E-09 3.7E-14 100.4 4.4 55 471-540 76-145 (162)
125 3mbr_X Glutamine cyclotransfer 98.9 8.3E-07 2.8E-11 86.1 24.7 173 6-188 42-233 (243)
126 3c75_H MADH, methylamine dehyd 98.9 7.1E-08 2.4E-12 102.8 18.6 186 7-197 99-409 (426)
127 3nol_A Glutamine cyclotransfer 98.8 4.9E-07 1.7E-11 88.5 22.4 168 22-199 37-210 (262)
128 2c4f_L Coagulation factor VII 98.8 2E-09 6.9E-14 96.4 4.6 77 552-631 47-132 (142)
129 1l0q_A Surface layer protein; 98.8 4.5E-07 1.5E-11 96.1 23.7 184 5-197 52-240 (391)
130 1lmj_A Fibrillin 1; EGF, calci 98.8 2E-09 6.9E-14 87.3 3.7 67 552-624 3-79 (86)
131 1nfu_B Coagulation factor XA, 98.8 1E-09 3.5E-14 102.6 2.1 81 552-639 42-130 (195)
132 3nol_A Glutamine cyclotransfer 98.8 8.8E-07 3E-11 86.6 23.0 169 7-188 65-254 (262)
133 3nok_A Glutaminyl cyclase; bet 98.8 2.4E-07 8.1E-12 90.6 18.7 164 23-199 50-219 (268)
134 3nok_A Glutaminyl cyclase; bet 98.8 7.2E-07 2.5E-11 87.2 21.6 173 4-188 72-264 (268)
135 1emn_A Fibrillin; extracellula 98.8 4.6E-09 1.6E-13 84.2 5.0 65 417-482 7-77 (82)
136 1aut_L Activated protein C; se 98.8 5.8E-09 2E-13 89.6 5.6 89 505-607 6-108 (114)
137 3mbr_X Glutamine cyclotransfer 98.8 5E-07 1.7E-11 87.7 19.8 163 27-199 22-188 (243)
138 2mad_H Methylamine dehydrogena 98.8 1.1E-06 3.7E-11 92.8 24.3 198 8-210 48-370 (373)
139 1cru_A Protein (soluble quinop 98.8 1.4E-07 4.9E-12 102.0 17.7 134 2-137 43-248 (454)
140 1ri6_A Putative isomerase YBHE 98.8 3E-07 1E-11 95.2 19.5 183 3-189 11-208 (343)
141 1jof_A Carboxy-CIS,CIS-muconat 98.8 5.3E-07 1.8E-11 95.0 21.4 163 24-190 143-341 (365)
142 2vh0_B Activated factor XA lig 98.7 1.9E-09 6.6E-14 95.5 1.1 75 552-631 42-124 (134)
143 1x7a_L Coagulation factor IX, 98.7 9E-09 3.1E-13 92.4 5.5 76 585-672 44-128 (146)
144 2p28_B Integrin beta-2; hybrid 98.7 5.6E-09 1.9E-13 99.7 4.4 103 511-628 96-214 (217)
145 2c4f_L Coagulation factor VII 98.7 4.1E-09 1.4E-13 94.4 3.0 75 506-589 48-130 (142)
146 1pby_B Quinohemoprotein amine 98.7 6.9E-07 2.4E-11 92.2 20.2 169 2-178 6-193 (337)
147 1z6c_A Vitamin K-dependent pro 98.7 3.8E-09 1.3E-13 85.8 2.3 69 552-628 3-78 (87)
148 2ghs_A AGR_C_1268P; regucalcin 98.7 4.6E-07 1.6E-11 93.9 18.2 151 24-189 47-209 (326)
149 1qks_A Cytochrome CD1 nitrite 98.7 1.5E-06 5.1E-11 96.7 23.3 190 2-198 172-381 (567)
150 1nir_A Nitrite reductase; hemo 98.7 1.1E-06 3.8E-11 97.7 21.9 186 3-198 155-363 (543)
151 3scy_A Hypothetical bacterial 98.7 2.5E-06 8.6E-11 89.4 23.6 159 24-188 98-289 (361)
152 1mda_H Methylamine dehydrogena 98.7 5.3E-07 1.8E-11 94.4 17.9 197 8-209 47-364 (368)
153 1nfu_B Coagulation factor XA, 98.6 4.6E-09 1.6E-13 98.2 1.0 73 506-589 43-122 (195)
154 1lmj_A Fibrillin 1; EGF, calci 98.6 1.1E-08 3.7E-13 82.9 3.0 67 506-584 4-79 (86)
155 2w2n_E LDL receptor, low-densi 98.6 7.6E-09 2.6E-13 87.3 2.1 76 530-624 18-100 (107)
156 2vh0_B Activated factor XA lig 98.6 7.1E-09 2.4E-13 91.8 1.5 73 506-589 43-122 (134)
157 3sre_A PON1, serum paraoxonase 98.6 2E-06 6.7E-11 89.1 20.1 162 22-190 45-252 (355)
158 3no2_A Uncharacterized protein 98.6 2.9E-06 9.9E-11 85.5 20.1 183 2-197 10-202 (276)
159 3bws_A Protein LP49; two-domai 98.6 3.3E-06 1.1E-10 90.7 22.0 186 4-197 188-397 (433)
160 1jof_A Carboxy-CIS,CIS-muconat 98.6 2E-06 6.8E-11 90.6 19.7 160 24-188 38-222 (365)
161 2w2n_E LDL receptor, low-densi 98.6 1.1E-08 3.9E-13 86.3 1.7 71 502-584 21-100 (107)
162 3sjl_D Methylamine dehydrogena 98.6 1.7E-06 5.9E-11 90.5 18.4 203 6-212 58-341 (386)
163 1z6c_A Vitamin K-dependent pro 98.6 2.5E-08 8.4E-13 80.9 3.5 68 506-587 4-77 (87)
164 1pby_B Quinohemoprotein amine 98.5 8E-06 2.7E-10 84.0 22.4 183 4-198 53-318 (337)
165 1nir_A Nitrite reductase; hemo 98.5 5.7E-06 1.9E-10 92.0 22.3 179 6-190 199-402 (543)
166 2oiz_A Aromatic amine dehydrog 98.5 2.6E-06 9E-11 89.5 18.6 86 6-92 30-128 (361)
167 1jmx_B Amine dehydrogenase; ox 98.5 1.1E-05 3.7E-10 83.6 22.4 139 2-149 16-177 (349)
168 1fwx_A Nitrous oxide reductase 98.5 3.3E-06 1.1E-10 92.2 18.2 186 2-190 107-361 (595)
169 3h5c_B Vitamin K-dependent pro 98.5 1.1E-07 3.7E-12 98.1 6.3 74 552-631 5-87 (317)
170 3q6k_A 43.2 kDa salivary prote 98.5 1.4E-05 4.6E-10 83.1 21.9 169 6-179 122-343 (381)
171 3amr_A 3-phytase; beta-propell 98.5 1.2E-05 4.2E-10 81.9 21.0 178 5-189 48-262 (355)
172 2ece_A 462AA long hypothetical 98.5 2.8E-06 9.5E-11 89.5 16.4 170 7-177 164-399 (462)
173 3no2_A Uncharacterized protein 98.5 8.2E-06 2.8E-10 82.1 19.4 175 6-189 55-252 (276)
174 3h5c_B Vitamin K-dependent pro 98.4 2E-07 6.8E-12 96.1 6.9 69 505-584 5-76 (317)
175 3bws_A Protein LP49; two-domai 98.4 1.1E-05 3.8E-10 86.6 20.7 183 5-196 142-340 (433)
176 3c75_H MADH, methylamine dehyd 98.4 8.2E-06 2.8E-10 86.8 17.5 112 36-150 83-212 (426)
177 2ece_A 462AA long hypothetical 98.4 1.8E-05 6E-10 83.5 19.4 185 2-189 101-351 (462)
178 3u7u_G Neuregulin 1; signaling 98.3 3.8E-07 1.3E-11 65.6 3.7 38 552-589 8-50 (55)
179 1jmx_B Amine dehydrogenase; ox 98.3 3.2E-05 1.1E-09 79.9 20.0 177 4-196 62-331 (349)
180 1fwx_A Nitrous oxide reductase 98.3 1.5E-05 5.2E-10 87.0 17.6 206 5-215 173-457 (595)
181 1edm_B Factor IX; epidermal gr 98.2 1.3E-06 4.6E-11 58.5 4.4 36 552-587 3-38 (39)
182 3sjl_D Methylamine dehydrogena 98.2 4E-05 1.4E-09 80.1 17.7 115 33-150 40-172 (386)
183 1qks_A Cytochrome CD1 nitrite 98.2 0.00013 4.4E-09 81.1 22.7 181 6-190 217-421 (567)
184 2mad_H Methylamine dehydrogena 98.1 0.00013 4.3E-09 76.8 20.5 148 34-188 29-194 (373)
185 2ojh_A Uncharacterized protein 98.1 9.6E-05 3.3E-09 73.9 18.8 177 4-190 19-206 (297)
186 3amr_A 3-phytase; beta-propell 98.1 0.00036 1.2E-08 71.1 21.1 157 49-212 48-239 (355)
187 3q6k_A 43.2 kDa salivary prote 98.0 0.00033 1.1E-08 72.7 20.5 184 24-210 85-332 (381)
188 1mda_H Methylamine dehydrogena 98.0 5.1E-05 1.7E-09 79.3 14.6 142 36-190 30-194 (368)
189 3u7u_G Neuregulin 1; signaling 98.0 2.2E-06 7.5E-11 61.6 2.5 35 417-451 10-49 (55)
190 2hqs_A Protein TOLB; TOLB, PAL 98.0 0.00033 1.1E-08 74.9 20.0 178 7-191 203-388 (415)
191 3zyj_B Netrin-G1; cell adhesio 97.9 4.3E-06 1.5E-10 86.9 3.6 42 511-571 371-412 (426)
192 2hqs_A Protein TOLB; TOLB, PAL 97.9 0.00056 1.9E-08 73.0 20.4 180 7-192 159-346 (415)
193 1edm_B Factor IX; epidermal gr 97.9 9.7E-06 3.3E-10 54.2 3.7 34 219-252 2-35 (39)
194 3zyj_B Netrin-G1; cell adhesio 97.9 5.5E-06 1.9E-10 86.1 3.5 104 462-608 305-410 (426)
195 2ojh_A Uncharacterized protein 97.8 0.00044 1.5E-08 68.9 16.5 146 6-154 109-265 (297)
196 3ca7_A Protein spitz; argos, E 97.7 2.4E-06 8.2E-11 61.2 -1.2 43 495-542 3-49 (52)
197 4a9v_A PHOX; hydrolase, beta-p 97.7 0.00017 5.9E-09 77.8 12.3 113 22-135 380-550 (592)
198 2k2s_B Micronemal protein 6; m 97.7 4E-06 1.4E-10 61.7 -0.4 38 552-589 11-51 (61)
199 2oiz_A Aromatic amine dehydrog 97.7 0.00082 2.8E-08 70.3 17.2 127 35-169 209-356 (361)
200 1egf_A Epidermal growth factor 97.7 2.6E-05 8.9E-10 56.0 3.8 38 552-589 3-45 (53)
201 3ca7_A Protein spitz; argos, E 97.7 2.8E-06 9.5E-11 60.9 -1.4 46 329-384 3-48 (52)
202 1a3p_A Epidermal growth factor 97.7 2.7E-05 9.1E-10 53.8 3.4 30 559-588 10-41 (45)
203 3azo_A Aminopeptidase; POP fam 97.6 0.0011 3.7E-08 75.4 17.7 181 7-191 161-370 (662)
204 3pe7_A Oligogalacturonate lyas 97.6 0.00076 2.6E-08 70.8 15.2 151 6-156 167-338 (388)
205 1a3p_A Epidermal growth factor 97.6 5E-05 1.7E-09 52.5 3.8 36 507-542 2-42 (45)
206 3azo_A Aminopeptidase; POP fam 97.6 0.00057 1.9E-08 77.7 14.5 185 6-191 101-326 (662)
207 2k2s_B Micronemal protein 6; m 97.6 2.1E-05 7.1E-10 57.9 1.5 40 592-632 11-54 (61)
208 1k36_A Epiregulin; EGF-like fo 97.5 3.6E-05 1.2E-09 53.2 2.5 36 552-588 3-43 (46)
209 3ow8_A WD repeat-containing pr 97.5 0.019 6.4E-07 58.6 24.2 184 6-198 101-287 (321)
210 1egf_A Epidermal growth factor 97.5 0.00011 3.7E-09 52.8 4.7 36 507-542 5-45 (53)
211 1gxr_A ESG1, transducin-like e 97.5 0.017 5.7E-07 58.6 23.1 177 6-193 118-299 (337)
212 2xyi_A Probable histone-bindin 97.5 0.0092 3.1E-07 63.7 21.7 179 5-190 149-353 (430)
213 4aez_A CDC20, WD repeat-contai 97.4 0.017 5.7E-07 60.9 23.2 184 5-193 194-383 (401)
214 1hae_A Heregulin-alpha; growth 97.4 5E-05 1.7E-09 56.9 1.9 36 553-588 7-47 (63)
215 1hae_A Heregulin-alpha; growth 97.4 4E-05 1.4E-09 57.4 1.2 37 414-450 5-46 (63)
216 3pe7_A Oligogalacturonate lyas 97.4 0.0061 2.1E-07 63.8 18.6 180 8-193 61-276 (388)
217 3c5m_A Oligogalacturonate lyas 97.4 0.0064 2.2E-07 63.6 18.7 182 5-191 166-385 (396)
218 2aq5_A Coronin-1A; WD40 repeat 97.3 0.023 7.9E-07 59.8 22.8 182 6-193 103-302 (402)
219 2xyi_A Probable histone-bindin 97.3 0.0089 3E-07 63.8 19.5 179 5-188 202-408 (430)
220 3hxj_A Pyrrolo-quinoline quino 97.3 0.02 7E-07 58.1 21.5 165 6-188 116-282 (330)
221 3o4h_A Acylamino-acid-releasin 97.3 0.0021 7.1E-08 71.8 15.0 170 8-188 91-274 (582)
222 4gqb_B Methylosome protein 50; 97.3 0.023 7.7E-07 58.7 21.3 178 5-190 101-289 (344)
223 1gxr_A ESG1, transducin-like e 97.3 0.049 1.7E-06 55.0 23.6 176 6-191 71-256 (337)
224 2z3z_A Dipeptidyl aminopeptida 97.2 0.0047 1.6E-07 70.7 17.2 181 6-191 234-436 (706)
225 2z3z_A Dipeptidyl aminopeptida 97.2 0.0042 1.4E-07 71.1 16.7 165 28-192 183-393 (706)
226 2gop_A Trilobed protease; beta 97.2 0.01 3.5E-07 60.9 18.1 167 6-187 42-250 (347)
227 2pm9_A Protein WEB1, protein t 97.2 0.0049 1.7E-07 65.0 15.6 189 5-198 87-302 (416)
228 2ymu_A WD-40 repeat protein; u 97.1 0.035 1.2E-06 61.4 22.4 191 6-209 365-557 (577)
229 4gqb_B Methylosome protein 50; 97.1 0.023 7.9E-07 58.6 19.5 176 6-188 148-329 (344)
230 2ymu_A WD-40 repeat protein; u 97.1 0.045 1.5E-06 60.5 23.1 171 6-188 324-496 (577)
231 1k8k_C P40, ARP2/3 complex 41 97.1 0.059 2E-06 55.4 22.6 188 5-199 28-242 (372)
232 4aez_A CDC20, WD repeat-contai 97.1 0.11 3.8E-06 54.4 25.0 174 6-190 155-336 (401)
233 4g56_B MGC81050 protein; prote 97.1 0.012 4.2E-07 61.0 17.0 158 27-191 141-302 (357)
234 1k36_A Epiregulin; EGF-like fo 97.1 0.00021 7E-09 49.4 2.0 35 507-542 5-44 (46)
235 2pm9_A Protein WEB1, protein t 97.0 0.024 8.2E-07 59.6 19.1 182 5-191 43-250 (416)
236 3hxj_A Pyrrolo-quinoline quino 97.0 0.021 7.3E-07 57.9 18.1 162 9-189 80-243 (330)
237 2ecf_A Dipeptidyl peptidase IV 97.0 0.0091 3.1E-07 68.7 16.9 161 28-190 211-415 (741)
238 2ynn_A Coatomer subunit beta'; 97.0 0.095 3.2E-06 52.6 22.6 186 6-198 34-225 (304)
239 2ynn_A Coatomer subunit beta'; 97.0 0.15 5E-06 51.2 23.9 188 6-200 76-269 (304)
240 2aq5_A Coronin-1A; WD40 repeat 97.0 0.083 2.8E-06 55.4 22.8 183 4-192 54-256 (402)
241 3zwl_B Eukaryotic translation 97.0 0.062 2.1E-06 55.0 21.5 145 5-152 94-254 (369)
242 4g56_B MGC81050 protein; prote 97.0 0.014 4.9E-07 60.5 16.3 177 6-189 160-342 (357)
243 1ob1_C Major merozoite surface 97.0 0.0008 2.7E-08 53.8 4.8 68 554-622 6-83 (99)
244 1apq_A Complement protease C1R 97.0 0.0005 1.7E-08 49.3 3.3 31 219-251 3-43 (53)
245 3ow8_A WD repeat-containing pr 97.0 0.12 4.1E-06 52.5 22.8 173 6-187 143-318 (321)
246 4a9v_A PHOX; hydrolase, beta-p 97.0 0.0066 2.2E-07 65.6 13.3 108 70-179 382-551 (592)
247 4ery_A WD repeat-containing pr 96.9 0.25 8.5E-06 49.4 25.0 186 6-198 86-276 (312)
248 1nql_B Epidermal growth factor 96.9 0.00019 6.3E-09 51.3 0.9 33 419-451 10-44 (53)
249 1r5m_A SIR4-interacting protei 96.9 0.064 2.2E-06 56.2 21.2 178 6-193 129-322 (425)
250 3c5m_A Oligogalacturonate lyas 96.9 0.0049 1.7E-07 64.5 12.1 180 7-192 60-275 (396)
251 2ecf_A Dipeptidyl peptidase IV 96.9 0.019 6.5E-07 65.9 18.1 120 25-153 36-187 (741)
252 3ei3_B DNA damage-binding prot 96.9 0.065 2.2E-06 55.7 20.8 182 5-195 94-287 (383)
253 3o4h_A Acylamino-acid-releasin 96.9 0.0056 1.9E-07 68.3 13.2 116 29-148 153-276 (582)
254 4ery_A WD repeat-containing pr 96.9 0.19 6.4E-06 50.4 23.4 177 6-191 44-224 (312)
255 3mkq_A Coatomer beta'-subunit; 96.9 0.058 2E-06 62.5 22.0 183 5-194 33-221 (814)
256 2pbi_B Guanine nucleotide-bind 96.9 0.22 7.6E-06 51.2 24.4 176 27-208 156-333 (354)
257 3zwl_B Eukaryotic translation 96.8 0.19 6.5E-06 51.2 23.5 183 5-195 52-254 (369)
258 1nql_B Epidermal growth factor 96.8 0.00032 1.1E-08 50.1 1.3 32 557-588 11-44 (53)
259 1vyh_C Platelet-activating fac 96.8 0.22 7.5E-06 52.5 23.8 195 6-208 171-387 (410)
260 1r5m_A SIR4-interacting protei 96.7 0.032 1.1E-06 58.6 17.0 152 28-190 209-361 (425)
261 2vdu_B TRNA (guanine-N(7)-)-me 96.7 0.097 3.3E-06 55.9 20.8 165 6-178 170-372 (450)
262 2xdw_A Prolyl endopeptidase; a 96.7 0.12 4.2E-06 58.9 22.7 183 7-192 98-322 (710)
263 1xfd_A DIP, dipeptidyl aminope 96.7 0.044 1.5E-06 62.6 18.8 127 5-134 35-191 (723)
264 1sq9_A Antiviral protein SKI8; 96.7 0.087 3E-06 54.8 19.7 186 5-197 89-329 (397)
265 2y38_A Laminin subunit alpha-5 96.7 0.0016 5.3E-08 67.6 5.7 34 471-517 287-331 (403)
266 1n1i_A Merozoite surface prote 96.7 0.0023 7.8E-08 51.5 5.3 73 553-628 11-95 (105)
267 3mkq_A Coatomer beta'-subunit; 96.7 0.15 5E-06 59.1 23.4 184 6-197 76-266 (814)
268 1xfd_A DIP, dipeptidyl aminope 96.7 0.025 8.6E-07 64.7 16.4 164 28-191 175-396 (723)
269 1vyh_C Platelet-activating fac 96.6 0.18 6.2E-06 53.1 21.9 138 5-149 128-267 (410)
270 1got_B GT-beta; complex (GTP-b 96.6 0.31 1.1E-05 49.7 23.1 164 28-199 146-310 (340)
271 3ei3_B DNA damage-binding prot 96.6 0.13 4.3E-06 53.4 20.4 158 25-190 73-236 (383)
272 2vdu_B TRNA (guanine-N(7)-)-me 96.6 0.082 2.8E-06 56.5 18.9 136 6-149 124-273 (450)
273 1sq9_A Antiviral protein SKI8; 96.6 0.13 4.3E-06 53.6 20.0 120 25-150 186-325 (397)
274 2fd6_A Urokinase-type plasmino 96.6 0.0015 5E-08 56.1 3.9 57 422-484 2-62 (122)
275 4e54_B DNA damage-binding prot 96.6 0.081 2.8E-06 56.3 18.6 182 5-192 140-329 (435)
276 1k32_A Tricorn protease; prote 96.5 0.027 9.1E-07 67.7 16.2 155 27-192 297-463 (1045)
277 2jkh_L Factor X light chain; p 96.5 0.00092 3.1E-08 48.3 1.9 29 221-251 2-32 (55)
278 3vl1_A 26S proteasome regulato 96.5 0.29 9.8E-06 51.3 22.4 110 32-148 104-213 (420)
279 1erj_A Transcriptional repress 96.5 0.44 1.5E-05 49.7 23.4 186 6-198 144-349 (393)
280 3jrp_A Fusion protein of prote 96.4 0.27 9.1E-06 50.4 21.2 178 6-189 78-286 (379)
281 4a11_B DNA excision repair pro 96.4 0.2 7E-06 51.9 20.5 119 25-148 99-219 (408)
282 1k8k_C P40, ARP2/3 complex 41 96.4 0.33 1.1E-05 49.6 21.9 157 25-188 8-171 (372)
283 2gop_A Trilobed protease; beta 96.4 0.031 1.1E-06 57.2 13.7 122 24-154 13-169 (347)
284 2fd6_A Urokinase-type plasmino 96.4 0.003 1E-07 54.1 4.7 60 598-670 2-63 (122)
285 3odt_A Protein DOA1; ubiquitin 96.3 0.22 7.5E-06 49.5 19.4 174 6-191 123-297 (313)
286 3iuj_A Prolyl endopeptidase; h 96.3 0.19 6.7E-06 57.1 21.0 178 7-191 208-406 (693)
287 3vl1_A 26S proteasome regulato 96.3 0.34 1.2E-05 50.7 21.6 178 6-192 118-324 (420)
288 2xdw_A Prolyl endopeptidase; a 96.3 0.29 1E-05 55.8 22.1 180 8-191 152-369 (710)
289 1pgu_A Actin interacting prote 96.2 0.17 5.9E-06 56.0 19.7 159 26-191 161-329 (615)
290 4a11_B DNA excision repair pro 96.2 0.21 7.3E-06 51.8 19.4 139 6-149 121-278 (408)
291 3dwl_C Actin-related protein 2 96.2 0.16 5.4E-06 52.4 18.2 135 5-146 31-176 (377)
292 3k26_A Polycomb protein EED; W 96.2 0.11 3.9E-06 53.0 16.8 180 6-193 94-321 (366)
293 1ob1_C Major merozoite surface 96.2 0.0057 1.9E-07 48.9 5.0 73 597-670 10-94 (99)
294 4e54_B DNA damage-binding prot 96.2 0.12 4E-06 55.0 17.4 156 26-189 120-281 (435)
295 1kli_L Factor VIIA; extrinsic 96.2 0.002 6.7E-08 48.8 2.1 34 218-251 3-37 (69)
296 1pgu_A Actin interacting prote 96.2 0.38 1.3E-05 53.2 22.1 184 6-197 38-245 (615)
297 3jrp_A Fusion protein of prote 96.2 0.45 1.5E-05 48.7 21.2 181 5-191 31-241 (379)
298 1k32_A Tricorn protease; prote 96.1 0.046 1.6E-06 65.6 15.1 139 29-178 341-491 (1045)
299 1g1s_A P-selectin; selectin, l 96.1 0.0011 3.7E-08 60.5 0.4 38 418-455 122-160 (162)
300 1yfq_A Cell cycle arrest prote 96.1 0.1 3.6E-06 52.8 15.7 171 5-188 31-223 (342)
301 2kl7_A Fibulin-4; secreted, ca 96.1 0.0035 1.2E-07 47.8 3.1 34 219-252 2-38 (71)
302 2bkl_A Prolyl endopeptidase; m 96.1 0.24 8.1E-06 56.4 19.9 182 6-192 93-306 (695)
303 4a5s_A Dipeptidyl peptidase 4 96.0 0.089 3.1E-06 60.4 16.3 117 74-192 262-402 (740)
304 1g1s_A P-selectin; selectin, l 96.0 0.0023 7.7E-08 58.3 2.0 36 554-589 121-156 (162)
305 2ygo_A WIF-1, WNT inhibitory f 96.0 0.0043 1.5E-07 56.2 3.7 38 339-384 143-180 (188)
306 3k26_A Polycomb protein EED; W 96.0 0.18 6.2E-06 51.4 17.0 117 26-147 70-192 (366)
307 3f3f_A Nucleoporin SEH1; struc 95.9 0.53 1.8E-05 47.2 20.1 180 5-190 31-249 (351)
308 3odt_A Protein DOA1; ubiquitin 95.9 0.55 1.9E-05 46.4 19.8 156 28-197 107-262 (313)
309 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.95 3.2E-05 46.7 22.1 135 37-187 239-375 (376)
310 1tl2_A L10, protein (tachylect 95.8 0.54 1.8E-05 44.3 17.3 150 24-189 39-209 (236)
311 3zwu_A Alkaline phosphatase PH 95.8 0.056 1.9E-06 59.4 12.5 110 23-134 381-549 (592)
312 4aqt_A Laminin subunit gamma-1 95.8 0.0025 8.6E-08 65.8 1.7 24 471-507 335-359 (375)
313 3i2n_A WD repeat-containing pr 95.8 0.37 1.3E-05 48.8 18.3 176 6-191 43-244 (357)
314 2y38_A Laminin subunit alpha-5 95.8 0.0081 2.8E-07 62.2 5.2 27 469-508 356-383 (403)
315 1got_B GT-beta; complex (GTP-b 95.8 0.88 3E-05 46.2 21.0 138 6-150 163-304 (340)
316 3ltf_D Protein spitz; receptor 95.8 0.0018 6.3E-08 47.0 0.3 31 512-542 15-49 (58)
317 3iz6_a 40S ribosomal protein R 95.8 1.3 4.6E-05 45.7 22.7 157 28-191 208-376 (380)
318 1yr2_A Prolyl oligopeptidase; 95.7 0.46 1.6E-05 54.4 20.6 181 7-191 133-351 (741)
319 1yfq_A Cell cycle arrest prote 95.7 0.21 7.3E-06 50.4 16.0 178 5-193 77-285 (342)
320 1erj_A Transcriptional repress 95.7 1.4 4.9E-05 45.6 22.8 155 28-189 126-286 (393)
321 1apq_A Complement protease C1R 95.7 0.0071 2.4E-07 43.1 3.2 24 558-583 20-43 (53)
322 3q7m_A Lipoprotein YFGL, BAMB; 95.7 1.5 5.1E-05 45.1 22.6 103 83-194 239-341 (376)
323 3i2n_A WD repeat-containing pr 95.6 0.2 6.8E-06 51.0 15.4 107 33-146 176-290 (357)
324 3frx_A Guanine nucleotide-bind 95.6 0.8 2.8E-05 46.0 19.8 138 6-150 86-230 (319)
325 3ltf_D Protein spitz; receptor 95.6 0.0037 1.3E-07 45.4 1.4 31 559-589 15-49 (58)
326 3iz6_a 40S ribosomal protein R 95.6 1.6 5.5E-05 45.0 22.4 160 28-192 160-331 (380)
327 1kb0_A Quinohemoprotein alcoho 95.5 1.4 4.9E-05 49.7 23.2 58 138-197 457-514 (677)
328 2ygo_A WIF-1, WNT inhibitory f 95.5 0.0087 3E-07 54.2 3.7 39 623-671 143-181 (188)
329 1p22_A F-BOX/WD-repeat protein 95.5 1.6 5.5E-05 45.9 22.4 177 5-197 151-332 (435)
330 2ovr_B FBW7, F-BOX/WD repeat p 95.4 2.3 7.8E-05 44.8 23.6 178 6-197 218-398 (445)
331 2jkh_L Factor X light chain; p 95.4 0.0057 2E-07 44.0 1.8 29 559-589 10-42 (55)
332 1gl4_A Nidogen-1, entactin; im 95.4 0.003 1E-07 61.7 0.4 37 218-254 3-41 (285)
333 1kig_L Factor XA; glycoprotein 95.4 0.0054 1.8E-07 43.3 1.6 23 227-251 7-29 (51)
334 2ad6_A Methanol dehydrogenase 95.4 2.3 7.8E-05 46.9 23.7 77 119-197 389-501 (571)
335 1n1i_A Merozoite surface prote 95.4 0.025 8.6E-07 45.5 5.5 69 597-670 16-95 (105)
336 2xzm_R RACK1; ribosome, transl 95.3 2.4 8.4E-05 42.8 22.2 152 27-188 78-242 (343)
337 2ovr_B FBW7, F-BOX/WD repeat p 95.2 2.9 0.0001 43.9 23.7 176 5-196 137-314 (445)
338 3v7d_B Cell division control p 95.2 2.7 9.3E-05 44.4 23.5 151 32-194 275-425 (464)
339 3frx_A Guanine nucleotide-bind 95.2 2.4 8.1E-05 42.5 21.9 158 26-192 66-229 (319)
340 2kl7_A Fibulin-4; secreted, ca 95.2 0.014 4.9E-07 44.3 3.6 33 552-584 3-38 (71)
341 3dw8_B Serine/threonine-protei 95.2 0.89 3E-05 47.8 19.2 159 26-193 178-376 (447)
342 4aqt_A Laminin subunit gamma-1 95.1 0.0064 2.2E-07 62.7 1.9 37 470-519 272-308 (375)
343 4aow_A Guanine nucleotide-bind 95.1 1.7 5.9E-05 43.4 20.4 122 25-152 38-164 (340)
344 3e50_C Protransforming growth 95.1 0.015 5E-07 40.5 3.0 33 634-671 14-46 (50)
345 1iox_A Betacellulin; EGF-like 95.1 0.0093 3.2E-07 41.7 2.0 34 634-672 14-47 (50)
346 3mmy_A MRNA export factor; mRN 95.1 1.8 6.2E-05 43.7 20.6 153 25-188 39-197 (368)
347 3iuj_A Prolyl endopeptidase; h 95.0 0.57 1.9E-05 53.2 18.1 146 7-156 259-414 (693)
348 1nr0_A Actin interacting prote 95.0 1.1 3.9E-05 49.8 20.3 156 27-189 149-312 (611)
349 1p22_A F-BOX/WD-repeat protein 95.0 2.4 8.2E-05 44.5 22.0 170 5-190 191-365 (435)
350 4aow_A Guanine nucleotide-bind 95.0 1.4 4.6E-05 44.2 19.1 153 28-189 131-285 (340)
351 3f3f_A Nucleoporin SEH1; struc 94.9 0.99 3.4E-05 45.1 17.9 116 25-146 110-248 (351)
352 2rnl_A Amphiregulin; AR, color 94.9 0.027 9.1E-07 39.3 3.9 32 634-670 18-49 (50)
353 1gl4_A Nidogen-1, entactin; im 94.9 0.0065 2.2E-07 59.4 1.0 38 552-589 5-46 (285)
354 3lrv_A PRE-mRNA-splicing facto 94.8 1.7 5.8E-05 44.0 19.6 115 26-148 126-245 (343)
355 1tl2_A L10, protein (tachylect 94.8 0.64 2.2E-05 43.8 14.3 113 64-187 33-160 (236)
356 3fm0_A Protein CIAO1; WDR39,SG 94.8 2.4 8.2E-05 43.0 20.6 115 27-148 18-137 (345)
357 1yr2_A Prolyl oligopeptidase; 94.8 0.46 1.6E-05 54.4 16.5 145 6-153 293-447 (741)
358 3v9f_A Two-component system se 94.7 0.92 3.1E-05 52.3 18.9 152 27-191 408-569 (781)
359 4h5i_A Guanine nucleotide-exch 94.7 0.51 1.7E-05 48.7 15.2 176 28-209 136-320 (365)
360 3v9f_A Two-component system se 94.7 0.84 2.9E-05 52.6 18.4 151 26-189 450-610 (781)
361 1q4g_A Prostaglandin G/H synth 94.6 0.014 4.7E-07 63.8 2.9 37 552-588 2-40 (553)
362 3gre_A Serine/threonine-protei 94.6 1.6 5.5E-05 45.8 19.2 156 38-198 182-367 (437)
363 2bkl_A Prolyl endopeptidase; m 94.5 1.3 4.4E-05 50.2 19.3 178 7-188 147-349 (695)
364 2wph_E Coagulation factor IXA 94.4 0.016 5.3E-07 42.3 1.9 22 227-250 8-30 (59)
365 3v7d_B Cell division control p 94.4 6.1 0.00021 41.6 23.8 184 5-197 140-348 (464)
366 2pbi_B Guanine nucleotide-bind 94.3 5.1 0.00018 40.7 22.8 165 24-197 63-236 (354)
367 1nr0_A Actin interacting prote 94.3 3 0.0001 46.3 21.5 160 26-193 60-224 (611)
368 2bz6_L Blood coagulation facto 94.3 0.015 5E-07 41.4 1.4 23 227-251 8-31 (53)
369 3jro_A Fusion protein of prote 94.2 1.3 4.4E-05 50.8 18.6 183 5-191 29-239 (753)
370 2i9a_A Urokinase-type plasmino 94.2 0.037 1.3E-06 48.7 4.2 60 510-588 12-75 (145)
371 2i9a_A Urokinase-type plasmino 94.2 0.041 1.4E-06 48.4 4.5 57 422-484 14-74 (145)
372 4a5s_A Dipeptidyl peptidase 4 94.2 0.58 2E-05 53.6 15.6 121 28-151 262-404 (740)
373 2oit_A Nucleoporin 214KDA; NH2 94.2 0.53 1.8E-05 50.0 14.3 122 27-153 94-229 (434)
374 3nt1_A Prostaglandin-endoperox 94.2 0.024 8.2E-07 62.0 3.6 36 553-588 2-39 (587)
375 3fm0_A Protein CIAO1; WDR39,SG 94.2 3 0.0001 42.2 19.6 176 6-188 37-223 (345)
376 3jro_A Fusion protein of prote 94.1 0.89 3E-05 52.1 16.9 179 6-189 76-284 (753)
377 1xdt_R Hbegf, heparin-binding 94.1 0.018 6.3E-07 44.0 1.7 33 634-671 46-78 (79)
378 3cfw_A L-selectin; EGF, cell a 94.0 0.032 1.1E-06 50.6 3.6 35 555-589 122-156 (164)
379 2e26_A Reelin, reeler protein; 94.0 0.011 3.7E-07 65.2 0.4 48 615-672 520-567 (725)
380 3mmy_A MRNA export factor; mRN 93.9 3.2 0.00011 41.8 19.3 94 5-105 62-161 (368)
381 1z68_A Fibroblast activation p 93.9 0.1 3.5E-06 59.6 8.4 160 29-191 172-394 (719)
382 3dm0_A Maltose-binding peripla 93.9 1.9 6.5E-05 48.7 19.0 178 6-192 451-634 (694)
383 3dw8_B Serine/threonine-protei 93.9 2.6 8.9E-05 44.1 19.0 162 23-192 26-260 (447)
384 3e50_C Protransforming growth 93.8 0.038 1.3E-06 38.4 2.8 31 314-344 14-45 (50)
385 2rnl_A Amphiregulin; AR, color 93.8 0.045 1.5E-06 38.1 3.0 30 314-343 18-48 (50)
386 1kb0_A Quinohemoprotein alcoho 93.8 7 0.00024 43.9 23.1 115 29-151 122-296 (677)
387 3cfw_A L-selectin; EGF, cell a 93.7 0.029 9.8E-07 50.9 2.7 37 596-633 124-160 (164)
388 2xe4_A Oligopeptidase B; hydro 93.7 1.5 5.2E-05 50.2 17.8 176 9-188 203-398 (751)
389 4h5i_A Guanine nucleotide-exch 93.7 5.2 0.00018 40.9 20.5 174 7-188 157-341 (365)
390 3sfz_A APAF-1, apoptotic pepti 93.7 3.2 0.00011 50.4 21.8 136 6-147 636-774 (1249)
391 2pm7_B Protein transport prote 93.6 3.8 0.00013 40.3 18.8 115 27-147 11-132 (297)
392 3gre_A Serine/threonine-protei 93.6 2.6 8.8E-05 44.1 18.4 165 25-197 111-299 (437)
393 1z68_A Fibroblast activation p 93.5 0.21 7.1E-06 57.0 10.0 123 5-134 34-187 (719)
394 1kli_L Factor VIIA; extrinsic 93.5 0.033 1.1E-06 42.0 2.1 36 552-589 5-47 (69)
395 3dm0_A Maltose-binding peripla 93.5 4.8 0.00016 45.3 21.4 162 25-193 382-553 (694)
396 3lrv_A PRE-mRNA-splicing facto 93.4 3.1 0.00011 41.9 18.0 115 72-192 126-246 (343)
397 1iox_A Betacellulin; EGF-like 93.4 0.041 1.4E-06 38.4 2.3 31 314-344 14-45 (50)
398 4a2l_A BT_4663, two-component 93.3 3.2 0.00011 47.8 19.9 151 28-191 359-527 (795)
399 1q4g_A Prostaglandin G/H synth 93.1 0.027 9.1E-07 61.5 1.6 35 417-451 4-40 (553)
400 1kig_L Factor XA; glycoprotein 92.9 0.038 1.3E-06 38.9 1.6 28 427-454 10-42 (51)
401 2oaj_A Protein SNI1; WD40 repe 92.9 3.4 0.00012 48.3 19.3 176 6-191 38-243 (902)
402 3nt1_A Prostaglandin-endoperox 92.7 0.053 1.8E-06 59.3 3.2 36 593-628 2-39 (587)
403 3sfz_A APAF-1, apoptotic pepti 92.5 5.3 0.00018 48.5 21.2 159 25-191 615-775 (1249)
404 2p26_A Integrin beta-2; hybrid 92.5 0.063 2.2E-06 52.8 3.1 60 560-628 198-275 (280)
405 1kv9_A Type II quinohemoprotei 92.5 6.2 0.00021 44.3 20.1 75 119-195 384-493 (668)
406 2xzm_R RACK1; ribosome, transl 92.4 9.8 0.00033 38.2 22.2 116 27-148 23-150 (343)
407 4gga_A P55CDC, cell division c 92.4 11 0.00039 39.0 22.1 159 27-192 232-397 (420)
408 3dwl_C Actin-related protein 2 92.4 1 3.4E-05 46.2 12.7 154 26-188 12-175 (377)
409 2p26_A Integrin beta-2; hybrid 92.3 0.053 1.8E-06 53.4 2.3 58 599-671 198-276 (280)
410 1g1t_A E-selectin; EGF, adhesi 92.2 0.035 1.2E-06 49.9 0.9 38 344-385 119-156 (157)
411 2hes_X YDR267CP; beta-propelle 92.1 10 0.00036 37.8 20.0 177 5-188 32-228 (330)
412 4a2l_A BT_4663, two-component 92.1 4.6 0.00016 46.4 19.0 149 27-190 407-571 (795)
413 2xe4_A Oligopeptidase B; hydro 92.1 4.5 0.00015 46.2 18.6 158 28-190 176-354 (751)
414 2e26_A Reelin, reeler protein; 92.0 0.033 1.1E-06 61.4 0.6 44 371-416 520-564 (725)
415 2wph_E Coagulation factor IXA 91.9 0.11 3.9E-06 37.7 3.1 37 564-601 11-52 (59)
416 3zwu_A Alkaline phosphatase PH 91.7 1.3 4.6E-05 48.5 12.8 104 71-176 383-548 (592)
417 3vu4_A KMHSV2; beta-propeller 91.5 13 0.00044 37.6 20.7 153 27-198 60-235 (355)
418 1szb_A Mannose binding lectin- 91.5 0.52 1.8E-05 42.7 8.0 31 219-251 123-158 (170)
419 1xdt_R Hbegf, heparin-binding 91.3 0.087 3E-06 40.3 2.0 31 557-588 45-77 (79)
420 2pm7_B Protein transport prote 91.3 12 0.0004 36.7 20.7 117 27-147 101-238 (297)
421 3b7f_A Glycosyl hydrolase, BNR 91.2 7.2 0.00024 40.3 17.7 169 29-210 180-391 (394)
422 2bz6_L Blood coagulation facto 90.7 0.091 3.1E-06 37.2 1.6 25 565-589 12-41 (53)
423 2oaj_A Protein SNI1; WD40 repe 90.6 15 0.00053 42.7 21.5 116 25-150 17-132 (902)
424 1g1t_A E-selectin; EGF, adhesi 90.6 0.082 2.8E-06 47.4 1.6 35 554-588 121-155 (157)
425 1yiq_A Quinohemoprotein alcoho 90.5 13 0.00043 41.9 20.0 15 119-133 392-406 (689)
426 1flg_A Protein (quinoprotein e 89.6 13 0.00044 40.9 18.7 76 119-196 415-522 (582)
427 4gq1_A NUP37; propeller, trans 89.6 16 0.00056 37.4 18.8 73 27-104 138-218 (393)
428 1w6s_A Methanol dehydrogenase 89.2 30 0.001 38.1 24.8 16 118-133 395-410 (599)
429 2oit_A Nucleoporin 214KDA; NH2 89.1 11 0.00038 39.6 17.1 97 26-127 150-252 (434)
430 2hes_X YDR267CP; beta-propelle 88.9 20 0.00067 35.7 21.8 153 28-189 17-183 (330)
431 3asi_A Neurexin-1-alpha; beta- 88.7 0.29 9.8E-06 51.7 4.2 37 553-589 186-223 (410)
432 2j04_A TAU60, YPL007P, hypothe 88.7 20 0.00067 39.1 18.6 170 25-209 85-273 (588)
433 2ad6_A Methanol dehydrogenase 88.6 31 0.0011 37.6 24.5 114 29-150 109-284 (571)
434 1b9w_A Protein (merozoite surf 88.5 0.78 2.7E-05 35.8 5.3 67 554-621 6-78 (95)
435 3bg1_A Protein SEC13 homolog; 88.4 12 0.0004 37.1 16.1 117 27-148 15-137 (316)
436 2ks1_B Epidermal growth factor 88.2 0.1 3.5E-06 34.9 0.2 11 685-695 13-23 (44)
437 3f6k_A Sortilin; protein sorti 88.2 35 0.0012 38.0 20.7 134 29-177 93-240 (685)
438 1szb_A Mannose binding lectin- 88.2 0.13 4.4E-06 46.8 1.0 34 552-587 124-166 (170)
439 2j04_B YDR362CP, TAU91; beta p 88.0 19 0.00066 38.9 18.5 167 25-199 207-395 (524)
440 3bg1_A Protein SEC13 homolog; 88.0 22 0.00075 35.1 17.8 180 6-189 34-246 (316)
441 4gga_A P55CDC, cell division c 87.9 27 0.00092 36.0 24.0 154 49-207 207-370 (420)
442 1kv9_A Type II quinohemoprotei 87.7 39 0.0013 37.7 21.4 115 29-151 111-283 (668)
443 2j04_A TAU60, YPL007P, hypothe 87.3 19 0.00065 39.2 17.4 115 28-154 132-261 (588)
444 3ott_A Two-component system se 87.2 13 0.00044 42.3 17.4 110 73-190 473-586 (758)
445 1nzi_A Complement C1S componen 87.0 1.9 6.6E-05 38.3 8.1 30 220-251 117-149 (159)
446 3a0f_A Xyloglucanase; beta-pro 86.1 17 0.00059 41.4 17.5 165 24-195 19-217 (763)
447 2l2t_A Receptor tyrosine-prote 85.9 0.16 5.6E-06 33.8 0.2 12 685-696 12-23 (44)
448 4ggc_A P55CDC, cell division c 85.8 27 0.00091 33.9 23.4 133 71-208 150-291 (318)
449 1yiq_A Quinohemoprotein alcoho 84.3 58 0.002 36.4 22.5 31 120-150 239-287 (689)
450 4gq1_A NUP37; propeller, trans 84.0 30 0.001 35.4 16.9 53 6-61 165-219 (393)
451 2ks1_B Epidermal growth factor 84.0 0.3 1E-05 32.7 0.8 31 682-712 13-43 (44)
452 3ott_A Two-component system se 83.7 17 0.00057 41.4 16.1 147 28-189 474-625 (758)
453 1zgk_A Kelch-like ECH-associat 83.3 36 0.0012 33.3 18.5 161 6-177 89-269 (308)
454 3ii7_A Kelch-like protein 7; p 83.2 36 0.0012 33.2 21.7 173 6-189 69-271 (306)
455 3asi_A Neurexin-1-alpha; beta- 83.2 0.57 2E-05 49.3 3.1 36 507-542 187-223 (410)
456 1w6s_A Methanol dehydrogenase 82.7 61 0.0021 35.5 23.1 32 120-151 245-291 (599)
457 1zgk_A Kelch-like ECH-associat 81.4 42 0.0015 32.8 18.7 174 6-188 38-238 (308)
458 2cn3_A Xyloglucanase, beta-1,4 81.0 44 0.0015 37.8 18.0 118 27-149 24-166 (737)
459 3ii7_A Kelch-like protein 7; p 80.9 43 0.0015 32.6 20.8 163 6-177 23-207 (306)
460 4ggc_A P55CDC, cell division c 80.3 43 0.0015 32.3 22.2 156 27-189 152-314 (318)
461 2xbg_A YCF48-like protein; pho 80.1 50 0.0017 32.8 17.2 151 28-188 165-320 (327)
462 3qcw_A Neurexin-1-alpha; synap 80.1 1.2 4E-05 54.2 4.6 42 548-589 1013-1055(1245)
463 1sqj_A OXG-RCBH, oligoxylogluc 79.6 42 0.0014 38.3 17.3 165 25-196 14-206 (789)
464 2l2t_A Receptor tyrosine-prote 79.1 0.45 1.5E-05 31.7 0.3 31 681-712 12-42 (44)
465 2vpj_A Kelch-like protein 12; 79.0 49 0.0017 32.1 21.3 163 6-177 77-260 (301)
466 3f1s_B Vitamin K-dependent pro 78.9 0.89 3E-05 45.1 2.6 32 220-251 2-34 (283)
467 1iij_A ERBB-2 receptor protein 77.9 0.2 6.9E-06 31.4 -1.6 6 686-691 11-16 (35)
468 2vpj_A Kelch-like protein 12; 76.4 58 0.002 31.5 22.8 174 6-188 30-229 (301)
469 1b9w_A Protein (merozoite surf 75.7 4.5 0.00015 31.6 5.0 68 597-670 10-90 (95)
470 2k1k_A Ephrin type-A receptor 75.6 0.68 2.3E-05 29.9 0.4 14 682-695 9-22 (38)
471 2k9y_A Ephrin type-A receptor 73.7 1.2 4E-05 29.4 1.2 14 684-697 14-27 (41)
472 4asc_A Kelch repeat and BTB do 72.7 74 0.0025 31.1 16.7 158 9-177 69-250 (315)
473 2uvk_A YJHT; unknown function, 72.6 80 0.0027 31.4 20.1 164 6-177 85-323 (357)
474 3vu4_A KMHSV2; beta-propeller 72.5 81 0.0028 31.4 20.0 76 113-190 193-271 (355)
475 1sqj_A OXG-RCBH, oligoxylogluc 72.5 1.3E+02 0.0046 34.1 19.0 121 27-151 65-205 (789)
476 2xn4_A Kelch-like protein 2; s 72.4 73 0.0025 30.9 20.5 161 6-177 76-258 (302)
477 2cn3_A Xyloglucanase, beta-1,4 72.4 1.1E+02 0.0036 34.6 18.0 119 27-147 73-230 (737)
478 2l6w_A Beta-type platelet-deri 74.8 0.76 2.6E-05 29.3 0.0 23 688-710 13-35 (39)
479 3b7f_A Glycosyl hydrolase, BNR 71.4 60 0.002 33.1 14.6 119 28-154 234-379 (394)
480 3qcw_A Neurexin-1-alpha; synap 71.0 2.1 7.4E-05 51.9 3.5 37 552-588 619-656 (1245)
481 2xbg_A YCF48-like protein; pho 70.6 87 0.003 31.0 20.2 159 27-197 123-285 (327)
482 4asc_A Kelch repeat and BTB do 70.2 63 0.0021 31.6 14.0 158 6-176 116-303 (315)
483 2woz_A Kelch repeat and BTB do 69.0 90 0.0031 30.5 15.9 157 7-176 127-313 (318)
484 2woz_A Kelch repeat and BTB do 68.9 90 0.0031 30.5 18.3 158 9-177 80-260 (318)
485 4hvt_A Ritya.17583.B, post-pro 68.5 1.5E+02 0.0053 33.1 18.2 120 33-155 295-437 (711)
486 2k1k_A Ephrin type-A receptor 67.1 2.5 8.4E-05 27.3 1.6 26 677-702 8-33 (38)
487 3f6k_A Sortilin; protein sorti 66.2 1.3E+02 0.0043 33.5 16.2 103 50-154 64-176 (685)
488 3sbq_A Nitrous-oxide reductase 65.8 1.2E+02 0.0042 32.7 15.0 137 21-163 318-493 (638)
489 2j04_B YDR362CP, TAU91; beta p 65.5 1.5E+02 0.0051 31.7 16.6 151 28-188 269-426 (524)
490 2knc_B Integrin beta-3; transm 65.1 3.2 0.00011 31.8 2.2 22 685-706 12-33 (79)
491 2xn4_A Kelch-like protein 2; s 64.3 1.1E+02 0.0036 29.6 21.6 160 7-177 30-211 (302)
492 1nzi_A Complement C1S componen 64.2 3.7 0.00013 36.3 2.8 29 552-582 117-148 (159)
493 3fl7_A Ephrin receptor; ATP-bi 63.6 2.3 7.9E-05 46.2 1.6 66 352-445 252-319 (536)
494 2jwa_A Receptor tyrosine-prote 60.3 2.2 7.6E-05 28.4 0.4 29 682-711 14-42 (44)
495 1flg_A Protein (quinoprotein e 57.5 2.1E+02 0.0073 31.0 24.1 15 120-134 250-264 (582)
496 3fl7_A Ephrin receptor; ATP-bi 55.8 5.9 0.0002 43.0 3.1 39 373-412 281-320 (536)
497 2ddu_A Reelin; beta-jelly-roll 53.7 2.6 9E-05 42.9 -0.1 29 593-626 192-222 (387)
498 3sbq_A Nitrous-oxide reductase 53.3 2.5E+02 0.0084 30.4 19.4 73 116-188 323-406 (638)
499 1k3i_A Galactose oxidase precu 53.1 2.3E+02 0.0079 31.1 15.9 183 8-192 266-499 (656)
500 3a0f_A Xyloglucanase; beta-pro 52.2 1.8E+02 0.006 32.9 14.8 174 5-184 566-757 (763)
No 1
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=7.5e-38 Score=325.29 Aligned_cols=242 Identities=36% Similarity=0.725 Sum_probs=218.7
Q ss_pred CCcccCCceeEEEccCcc---cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceE
Q psy6570 1 MASISSGNVTRVKREMNL---KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDI 77 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~---~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~i 77 (713)
++|+..++|+|+++++.. .++...+..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+..|++|
T Consensus 51 w~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~---~~~~I~~~~~dG~~~~~l~~~~~~~P~gi 127 (318)
T 3sov_A 51 WSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSLRKVLFWQELDQPRAI 127 (318)
T ss_dssp EEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC---CCCEEEEEECCCCcEEEEEeCCCCCccEE
Confidence 468889999999998853 344678899999999999999999999 78999999999999888887888999999
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE 157 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~ 157 (713)
||||.+|+|||+|++..++|+++++||+.+++++...+.+|+|||||+.+++|||+|+..++|++++++|+.++++...
T Consensus 128 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~- 206 (318)
T 3sov_A 128 ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG- 206 (318)
T ss_dssp EEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-
T ss_pred EEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC-
Confidence 9999999999999875559999999999999998888999999999999999999999999999999999999888753
Q ss_pred CCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCC--CCCCCCeee
Q psy6570 158 DNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK--PCHQSALCI 235 (713)
Q Consensus 158 ~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~--~C~~~~~C~ 235 (713)
.+.+|+||+++++.|||+|+.+++|.++++..+.....+...+..|++|+++|+.+|+ ...|+|+.+ .| +++|+
T Consensus 207 -~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~-~~~n~C~~~ng~C--s~~C~ 282 (318)
T 3sov_A 207 -SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP-NATNPCGIDNGGC--SHLCL 282 (318)
T ss_dssp -CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGGSC-CCCCTTTTTGGGC--SSEEE
T ss_pred -CCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEecccccc-ccccccccCCCCc--ceEEe
Confidence 3789999999999999999999999999998787778888888999999999999995 458999865 57 89999
Q ss_pred ccCC--CceeeeCCCCc
Q psy6570 236 NLPS--SHTCLCPDHLT 250 (713)
Q Consensus 236 ~~~g--~~~C~C~~G~~ 250 (713)
..++ +|+|.||+||.
T Consensus 283 ~~~~~~~~~C~C~~g~~ 299 (318)
T 3sov_A 283 MSPVKPFYQCACPTGVK 299 (318)
T ss_dssp ECSSTTSEEEECSTTCC
T ss_pred cCCCCCCeEEECCCCCE
Confidence 9987 79999999998
No 2
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.1e-37 Score=335.22 Aligned_cols=244 Identities=34% Similarity=0.699 Sum_probs=218.2
Q ss_pred CCcccCCceeEEEccCc-----ccEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 1 MASISSGNVTRVKREMN-----LKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~-----~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
++|+.+++|+++++++. .+++ ...+..|.||||||.+++|||+|. ..++|.+++++|+.+++++...+..|
T Consensus 128 wsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~---~~~~I~~~~~~g~~~~~l~~~~~~~P 204 (400)
T 3p5b_L 128 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVKRKTLFRENGSKP 204 (400)
T ss_dssp EEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEECTTTCSEEEEEECSSCCE
T ss_pred EEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC---CCCeEEEEeCCCCceEEEEeCCCCCc
Confidence 46788899999998872 2333 448899999999999999999999 78999999999999999988889999
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
++|||||.+++|||||++..++|+++++||+.+++++...+.+|+|||||+.+++|||+|...++|++++++|..++++.
T Consensus 205 ~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 205 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE
T ss_pred ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE
Confidence 99999999999999999865699999999999999998889999999999999999999999999999999999998888
Q ss_pred ecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCC-----CCCC
Q psy6570 155 HTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDD-----KPCH 229 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~-----~~C~ 229 (713)
.....+.+|++|++++++|||+||.+++|+++++..+....++..++..|++|+++|+.+|+ ...|+|.. ..|
T Consensus 285 ~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~qp-~~~n~c~~~~~~ng~C- 362 (400)
T 3p5b_L 285 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQP-RGVNWCERTTLSNGGC- 362 (400)
T ss_dssp ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGSC-CCCCSSSSSSSGGGGC-
T ss_pred eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccCC-CCCCccccccCCCcCc-
Confidence 76556889999999999999999999999999998888888888889999999999999995 56799963 357
Q ss_pred CCCeeeccCC------CceeeeCCCCc
Q psy6570 230 QSALCINLPS------SHTCLCPDHLT 250 (713)
Q Consensus 230 ~~~~C~~~~g------~~~C~C~~G~~ 250 (713)
.++|+..+. +|+|.||+||.
T Consensus 363 -~~lC~~~~~~~~~~~~~~C~C~~g~~ 388 (400)
T 3p5b_L 363 -QYLCLPAPQINPHSPKFTCACPDGML 388 (400)
T ss_dssp -SSEEEECCCSSTTCCSEEEECCTTCE
T ss_pred -CCeecCCCcccCCCCCeeEECCCCCE
Confidence 899998875 69999999998
No 3
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=356.92 Aligned_cols=253 Identities=33% Similarity=0.676 Sum_probs=223.7
Q ss_pred CCcccCCceeEEEccCc-----ccEEe-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 1 MASISSGNVTRVKREMN-----LKTVL-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~-----~~~~~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
|+|..+++|+++++++. .++++ ..+..|.||||||.+++|||+|. ..++|++++++|+.+++|+...+..|
T Consensus 440 ~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~---~~~~I~v~~ldG~~~~~l~~~~l~~P 516 (791)
T 3m0c_C 440 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVKRKTLFRENGSKP 516 (791)
T ss_dssp EEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSSSEEEEEECTTCCE
T ss_pred EeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec---CCCeEEEEeCCCCeEEEEEeCCCCCc
Confidence 46778889999998863 23444 48999999999999999999999 78999999999999999998889999
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
++|||||.+++|||||++..++|++++|||+.+++++...+.+|+|||||+.+++|||+|...++|++++++|..+++++
T Consensus 517 ~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 517 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 99999999999999999875599999999999999998899999999999999999999999999999999999999988
Q ss_pred ecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCC-----CCCC
Q psy6570 155 HTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDD-----KPCH 229 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~-----~~C~ 229 (713)
.....+.+|++|++++++|||+|+.+++|+++++..+..+.++...+..|++|+|+|+.+|+ ...|+|.. ..|
T Consensus 597 ~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp-~~~N~C~~~~~~ng~C- 674 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQP-RGVNWCERTTLSNGGC- 674 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSC-CCCCTTTSSSSGGGGC-
T ss_pred cCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCC-CCCCcccccCCCCcCc-
Confidence 76556889999999999999999999999999999898888888889999999999999994 56899986 357
Q ss_pred CCCeeeccCC------CceeeeCCCCccccccCCCCCc
Q psy6570 230 QSALCINLPS------SHTCLCPDHLTEELNVTSGKMS 261 (713)
Q Consensus 230 ~~~~C~~~~g------~~~C~C~~G~~~~~~~~~~~c~ 261 (713)
+++|+..|+ +|+|+||.||. +..+..+|.
T Consensus 675 -shlCl~~p~~~~~~~~~~C~Cp~g~~--L~~d~~tC~ 709 (791)
T 3m0c_C 675 -QYLCLPAPQINPHSPKFTCACPDGML--LARDMRSCL 709 (791)
T ss_dssp -SSEEEECCCCSTTCCSEEEECCTTCE--ECTTSSCEE
T ss_pred -CeeecCCCCcCCCCCCceeECCCCCE--ECCCCCcCC
Confidence 899998775 69999999998 334445553
No 4
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-37 Score=325.72 Aligned_cols=242 Identities=35% Similarity=0.719 Sum_probs=219.5
Q ss_pred CCcccCCceeEEEccCcc-cE-EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 1 MASISSGNVTRVKREMNL-KT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~~-~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
++|+..++|+|+++++.. +. +..++..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+..|++||
T Consensus 89 ~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~---~~~~I~~~~~dG~~~~~l~~~~l~~P~~ia 165 (349)
T 3v64_C 89 WSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS---GTSRIEVANLDGAHRKVLLWQSLEKPRAIA 165 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECTTCSCEEEEE
T ss_pred EEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC---CCCeEEEEcCCCCceEEEEeCCCCCcceEE
Confidence 467888999999999854 33 3567889999999999999999999 788999999999998888877889999999
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCC
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTED 158 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~ 158 (713)
|||.+++|||+|++..++|+|+++||+.+++++...+.+|+|||||+.+++|||+|+..++|++++++|+.++++...
T Consensus 166 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-- 243 (349)
T 3v64_C 166 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-- 243 (349)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--
T ss_pred EecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC--
Confidence 999999999999987349999999999999888878999999999999999999999999999999999988877654
Q ss_pred CCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCCC--CCCCCeeec
Q psy6570 159 NGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKP--CHQSALCIN 236 (713)
Q Consensus 159 ~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~~--C~~~~~C~~ 236 (713)
.+.+|+||++++++|||+|+.+++|.++++..+....++...+..|.+|+++|+.+|+ ...|+|..++ | +++|+.
T Consensus 244 ~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp-~~~n~C~~~~g~C--~~lCl~ 320 (349)
T 3v64_C 244 GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQP-AGKNRCGDNNGGC--THLCLP 320 (349)
T ss_dssp SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSC-CCCCTTTTGGGGC--SSEEEC
T ss_pred CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCc-cccCcccCCCCCc--ccEeec
Confidence 3679999999999999999999999999988888888888889999999999999994 4689999876 7 899999
Q ss_pred cCCCceeeeCCCCc
Q psy6570 237 LPSSHTCLCPDHLT 250 (713)
Q Consensus 237 ~~g~~~C~C~~G~~ 250 (713)
.+++|+|.||+||.
T Consensus 321 ~~~~~~C~C~~g~~ 334 (349)
T 3v64_C 321 SGQNYTCACPTGFR 334 (349)
T ss_dssp CTTSCEEECCTTEE
T ss_pred CCCCCeeECCCCCc
Confidence 99999999999997
No 5
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=9.2e-37 Score=318.12 Aligned_cols=244 Identities=34% Similarity=0.707 Sum_probs=214.8
Q ss_pred CCcccCCceeEEEccC----cc-cEEe-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 1 MASISSGNVTRVKREM----NL-KTVL-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 1 vad~~~~~I~~~~~~~----~~-~~~~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
++|...++|+++++++ .. ++++ ..+..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+..|
T Consensus 46 ~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~~~~P 122 (316)
T 1ijq_A 46 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVKRKTLFRENGSKP 122 (316)
T ss_dssp EEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSSSEEEEEECTTCCE
T ss_pred EEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC---CCCEEEEEeCCCCceEEEEECCCCCc
Confidence 4677889999999887 22 3333 46789999999999999999999 78999999999998888887778999
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
++|++||.+++|||+|++..++|+++++||+.+++++...+.+|+||+||+.+++|||+|...++|++++++|+.++++.
T Consensus 123 ~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~ 202 (316)
T 1ijq_A 123 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 202 (316)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEe
Confidence 99999999999999999864599999999999988887789999999999999999999999999999999999998887
Q ss_pred ecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCC-----CCC
Q psy6570 155 HTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK-----PCH 229 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~-----~C~ 229 (713)
.....+.+|.+|++++++|||+|+.+++|.++++..+.....+..++..|.+|+++|+.+|+ ...|+|..+ .|
T Consensus 203 ~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp-~~~n~C~~~~~~ng~C- 280 (316)
T 1ijq_A 203 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQP-RGVNWCERTTLSNGGC- 280 (316)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSC-CCCCTTSSSSSGGGGC-
T ss_pred ecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEEeccccCC-cccccccccccCCCCc-
Confidence 65445789999999999999999999999999998788788888888899999999999985 467999865 47
Q ss_pred CCCeeeccC------CCceeeeCCCCc
Q psy6570 230 QSALCINLP------SSHTCLCPDHLT 250 (713)
Q Consensus 230 ~~~~C~~~~------g~~~C~C~~G~~ 250 (713)
+++|++.| ++|+|.||+||.
T Consensus 281 -s~~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 281 -QYLCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp -SSEEEECCCCSTTCCSEEEECCTTCE
T ss_pred -CcccCCCccccCCCCCeEeeCCCCCE
Confidence 89999887 589999999997
No 6
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-36 Score=326.15 Aligned_cols=244 Identities=34% Similarity=0.690 Sum_probs=220.4
Q ss_pred CCcccCCceeEEEccCcc--cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 1 MASISSGNVTRVKREMNL--KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~--~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
++|+..++|+|+++++.. .++..++..|.|||+||.+++|||+|. ..++|.+++++|+.+++++..++..|++||
T Consensus 132 ~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~---~~~~I~~~~~dg~~~~~l~~~~l~~P~gia 208 (386)
T 3v65_B 132 WSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS---GTSRIEVANLDGAHRKVLLWQSLEKPRAIA 208 (386)
T ss_dssp EEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET---TTTEEEECBTTSCSCEEEECSSCSCEEEEE
T ss_pred EEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC---CCCeEEEEeCCCCceEEeecCCCCCCcEEE
Confidence 467888999999999864 333567889999999999999999999 788999999999998888888899999999
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCC
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTED 158 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~ 158 (713)
|||.+++|||+|++..++|+|+++||+.+++++...+.+|+|||||+.+++|||+|+..++|++++++|+.+++++..
T Consensus 209 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-- 286 (386)
T 3v65_B 209 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-- 286 (386)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS--
T ss_pred EEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC--
Confidence 999999999999987459999999999999998888999999999999999999999999999999999988877654
Q ss_pred CCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCCCCCCCCeeeccC
Q psy6570 159 NGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP 238 (713)
Q Consensus 159 ~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~~C~~~~~C~~~~ 238 (713)
.+.+|+||++++++|||+||.+++|.++++..+....++...+..|.+|+++|+.+|+ ...|+|..++.+.+++|+..+
T Consensus 287 ~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~-~~~n~C~~~ng~C~~lCl~~~ 365 (386)
T 3v65_B 287 GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQP-AGKNRCGDNNGGCTHLCLPSG 365 (386)
T ss_dssp SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSC-CCCCTTTTSCTTSSSEEECCS
T ss_pred CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCc-CCcCccccCCCCCCceeeeCC
Confidence 3679999999999999999999999999988888888888889999999999999994 478999987633389999999
Q ss_pred CCceeeeCCCCc
Q psy6570 239 SSHTCLCPDHLT 250 (713)
Q Consensus 239 g~~~C~C~~G~~ 250 (713)
++|+|+||+||.
T Consensus 366 ~~~~C~C~~g~~ 377 (386)
T 3v65_B 366 QNYTCACPTGFR 377 (386)
T ss_dssp SSCEEECCTTCB
T ss_pred CCCeeECCCCCc
Confidence 999999999997
No 7
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2.3e-36 Score=341.30 Aligned_cols=243 Identities=28% Similarity=0.598 Sum_probs=217.8
Q ss_pred CCcccCCceeEEEccCcc-cEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 1 MASISSGNVTRVKREMNL-KTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
++|...++|+|+++++.. +++ ..++..|.||||||.+++|||+|. ..++|.+++++|+.+++++..++..|++||
T Consensus 365 ~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~---~~~~I~v~~~~G~~~~~l~~~~l~~P~~ia 441 (619)
T 3s94_A 365 WTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT---GTDRIEVTRLNGTMRKILISEDLEEPRAIV 441 (619)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECTTCCSEEEEE
T ss_pred EEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC---CCCcEEEEeCCCCeEEEEEECCCCCeeeEE
Confidence 467889999999999843 333 567899999999999999999999 789999999999999988888899999999
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCC
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTED 158 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~ 158 (713)
|||.+|.|||||++..++|+++.|||+.+++++...+.+|+|||||+.+++|||+|...++|++++++|+.++++...
T Consensus 442 vdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~-- 519 (619)
T 3s94_A 442 LDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVED-- 519 (619)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEEC--
T ss_pred EEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEecc--
Confidence 999999999999987679999999999999998888999999999999999999999999999999999999888754
Q ss_pred CCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCCCCCCCCeeeccC
Q psy6570 159 NGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLP 238 (713)
Q Consensus 159 ~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~~C~~~~~C~~~~ 238 (713)
.+.+|+||++++++|||+|+..++|+++++.++ ..+++...+..+++|++++...|. ..|+|..++-+..++|++.+
T Consensus 520 ~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~C~~~ng~C~~~C~~~~ 596 (619)
T 3s94_A 520 KIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQLPDLMGLKATNVHRVI--GSNPCAEENGGCSHLCLYRP 596 (619)
T ss_dssp CCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSCCCEEEEEEEESSCCC--CCCGGGSGGGGCSSEEEEET
T ss_pred CCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCCCCCceeeeccccccc--ccccCCCCCCChhHhhccCC
Confidence 477999999999999999999999999999888 557777788899999999988763 68999865422289999999
Q ss_pred CCceeeeCCCCcc
Q psy6570 239 SSHTCLCPDHLTE 251 (713)
Q Consensus 239 g~~~C~C~~G~~~ 251 (713)
++|+|.|++||..
T Consensus 597 ~~~~C~C~~g~~l 609 (619)
T 3s94_A 597 QGLRCACPIGFEL 609 (619)
T ss_dssp TEEEEECCTTCEE
T ss_pred CCeEEECCCCCEE
Confidence 9999999999983
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=5e-36 Score=338.75 Aligned_cols=248 Identities=35% Similarity=0.669 Sum_probs=220.7
Q ss_pred CCcccCCceeEEEccCcc-cEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 1 MASISSGNVTRVKREMNL-KTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
++|+.+++|+|+++++.. +++ ..++..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+..|++||
T Consensus 53 wtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~---~~~~I~v~~~dG~~~~~l~~~~l~~P~~ia 129 (628)
T 4a0p_A 53 WTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT---GTNRIEVSKLDGQHRQVLVWKDLDSPRALA 129 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTSTTCEEEECSSCCCEEEEE
T ss_pred EEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC---CCCEEEEEecCCCcEEEEEeCCCCCcccEE
Confidence 467889999999999853 333 557789999999999999999999 789999999999999888878899999999
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCC
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTED 158 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~ 158 (713)
|||.+|+|||||++..++|+|+++||+.+++++. .+.+|+||+||+.+++|||+|...++|++++++|..++++...
T Consensus 130 vdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~-- 206 (628)
T 4a0p_A 130 LDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADD-- 206 (628)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--
T ss_pred EccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeecc--
Confidence 9999999999999866699999999999988875 7899999999999999999999999999999999988766543
Q ss_pred CCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCC--CCCCCCeeec
Q psy6570 159 NGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK--PCHQSALCIN 236 (713)
Q Consensus 159 ~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~--~C~~~~~C~~ 236 (713)
+.+|+||++++++|||+||.+++|+++++..+...+++..++..|++|+++|+.+|+ ..|+|+.+ .| +++|++
T Consensus 207 -l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~--~~n~C~~~ng~C--~~~C~~ 281 (628)
T 4a0p_A 207 -LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS--GWNECASSNGHC--SHLCLA 281 (628)
T ss_dssp -CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSC--CCCTTTTTGGGC--SSEEEE
T ss_pred -CCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccc--cceEeccCCCCc--chhhhc
Confidence 779999999999999999999999999999888888888888999999999999994 67999875 47 899999
Q ss_pred cC-CCceeeeCCCCccccccCCCCCc
Q psy6570 237 LP-SSHTCLCPDHLTEELNVTSGKMS 261 (713)
Q Consensus 237 ~~-g~~~C~C~~G~~~~~~~~~~~c~ 261 (713)
.+ ++|+|.|++||.. ..+...|.
T Consensus 282 ~~~~~~~C~C~~g~~l--~~d~~~C~ 305 (628)
T 4a0p_A 282 VPVGGFVCGCPAHYSL--NADNRTCS 305 (628)
T ss_dssp ETTTEEEEECSTTCEE--CTTSSCEE
T ss_pred CCCCCeeEEcCCCcEe--cccCCcCc
Confidence 99 8999999999973 33344443
No 9
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=4.7e-36 Score=338.78 Aligned_cols=243 Identities=36% Similarity=0.719 Sum_probs=211.6
Q ss_pred CCcccCCceeEEEccCcc--c-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceE
Q psy6570 1 MASISSGNVTRVKREMNL--K-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDI 77 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~--~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~i 77 (713)
+||+.+++|+|+++++.. + ++..++..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+..|++|
T Consensus 56 ~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~---~~~~I~v~~~dG~~~~~l~~~~l~~P~~I 132 (619)
T 3s94_A 56 WSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSLRKVLFWQELDQPRAI 132 (619)
T ss_dssp EEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSCCCCE
T ss_pred EEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeC---CCCEEEEEECCCCCEEEEEeCCCCCCceE
Confidence 478889999999999852 3 34567899999999999999999999 78999999999999988887789999999
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE 157 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~ 157 (713)
||||.+|+|||||++..++|+|+++||+.+++++...+.+|+|||||+.+++|||+|...++|++++++|..++.+...
T Consensus 133 avdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~- 211 (619)
T 3s94_A 133 ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG- 211 (619)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------
T ss_pred EEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC-
Confidence 9999999999999987679999999999999999888999999999999999999999999999999999998887653
Q ss_pred CCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCC--CCCCCCeee
Q psy6570 158 DNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK--PCHQSALCI 235 (713)
Q Consensus 158 ~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~--~C~~~~~C~ 235 (713)
.+.+|+||++++++|||+||.+++|+++++.++.....+...+..|.+|+++|+.+|+ ...|+|..+ .| +++|+
T Consensus 212 -~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp-~~~n~C~~~ng~C--s~lCl 287 (619)
T 3s94_A 212 -SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP-NATNPCGIDNGGC--SHLCL 287 (619)
T ss_dssp -----CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSC-CCCCTTTTTGGGC--SSEEE
T ss_pred -CCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCC-CccccccCCCCcc--cceEE
Confidence 3779999999999999999999999999999888888888888899999999999995 578999876 46 89999
Q ss_pred ccCC--CceeeeCCCCcc
Q psy6570 236 NLPS--SHTCLCPDHLTE 251 (713)
Q Consensus 236 ~~~g--~~~C~C~~G~~~ 251 (713)
+.+. +|+|.||+||..
T Consensus 288 ~~~~~~~~~C~C~~g~~l 305 (619)
T 3s94_A 288 MSPVKPFYQCACPTGVKL 305 (619)
T ss_dssp ECSSTTSEEEECCTTCCB
T ss_pred CCCCCCCceEeCCchhee
Confidence 9884 799999999973
No 10
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=3.7e-35 Score=331.66 Aligned_cols=245 Identities=25% Similarity=0.445 Sum_probs=215.2
Q ss_pred CCcccCCceeEEEccCcc-c-EEec------CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCC
Q psy6570 1 MASISSGNVTRVKREMNL-K-TVLS------NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN 72 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~-~~~~------~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~ 72 (713)
++|+..++|+|+++++.. + ++.. .+..|.|||+||.+++|||+|. ..++|.+++++|+.+++++...+.
T Consensus 356 ~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~---~~~~I~v~~~~G~~~~~l~~~~l~ 432 (628)
T 4a0p_A 356 WIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCE---ATNVINVTRLDGRSVGVVLKGEQD 432 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCEEEEEEECTTC
T ss_pred EEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcC---CCCEEEEEECCCCeEEEEEeCCCC
Confidence 467889999999998854 2 3333 5778999999999999999999 789999999999998888888899
Q ss_pred CcceEEEcCCCCcEEEEccCCCC-eEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCcee
Q psy6570 73 EPYDIALEPLSGRMFWTELGIKP-RISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRF 151 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~~~~-~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~ 151 (713)
.|++|||||.+|+|||||++..+ +|+|++|||+.+++++...+.+|+|||||+.+++|||+|...++|++++++|+.++
T Consensus 433 ~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~ 512 (628)
T 4a0p_A 433 RPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRI 512 (628)
T ss_dssp CEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceE
Confidence 99999999999999999998774 89999999999999998889999999999999999999999999999999999999
Q ss_pred EEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCCCCCCC
Q psy6570 152 VVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDKPCHQS 231 (713)
Q Consensus 152 ~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~~C~~~ 231 (713)
++... .+.+|+||++++++|||+|+..++|+++++..+...+.+...+..+.+|.+++...+.....|+|+.++-+..
T Consensus 513 ~~~~~--~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~ 590 (628)
T 4a0p_A 513 VLEDS--NILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCS 590 (628)
T ss_dssp EEECS--SCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCS
T ss_pred EEEcC--CCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcc
Confidence 88753 4779999999999999999999999999999888888888888889999998876553346789986532228
Q ss_pred CeeeccCC-CceeeeCCCCc
Q psy6570 232 ALCINLPS-SHTCLCPDHLT 250 (713)
Q Consensus 232 ~~C~~~~g-~~~C~C~~G~~ 250 (713)
++|+..+. .++|.||.||.
T Consensus 591 ~~C~~~~~~~~~C~C~~g~~ 610 (628)
T 4a0p_A 591 HICLVKGDGTTRCSCPMHLV 610 (628)
T ss_dssp SEEEECTTSCEEEECCTTEE
T ss_pred hhcccCCCCCeeeeCCCCCE
Confidence 99998776 58999999997
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=3e-34 Score=329.21 Aligned_cols=244 Identities=34% Similarity=0.699 Sum_probs=214.3
Q ss_pred CCcccCCceeEEEccC----cc-cEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 1 MASISSGNVTRVKREM----NL-KTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 1 vad~~~~~I~~~~~~~----~~-~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
|+|+..++|+++++++ .. +++ ...+..|.||||||.+++|||+|. ..++|.+++++|+.+++++...+..|
T Consensus 422 ~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~---~~~~I~v~d~dg~~~~~l~~~~~~~P 498 (699)
T 1n7d_A 422 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVKRKTLFREQGSKP 498 (699)
T ss_dssp ECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT---TTSCEEEEBSSSCCEEEECCCSSCCC
T ss_pred EEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec---cCCeEEEEecCCCceEEEEeCCCCCc
Confidence 4678889999999986 22 223 356789999999999999999998 78899999999999888887778999
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
++|||||..++|||||++..++|++++++|+.+++++...+.+|+|||||+.+++|||+|...++|++++++|..+++++
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 99999999999999998864599999999999988887789999999999999999999999999999999999998887
Q ss_pred ecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccccCCccCCCCCC-----CCC
Q psy6570 155 HTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQAHNVTNHCDDK-----PCH 229 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~~~~~C~~~-----~C~ 229 (713)
.....+.+|++|++++++|||++|.+++|+++++..+..+.++..++..|++|+++|+.+|+ ...|+|..+ .|
T Consensus 579 ~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp-~~~n~C~~~~~~ng~C- 656 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQP-RGVNWCERTTLSNGGC- 656 (699)
T ss_dssp CCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSC-CSCCSSCSSSCSSCSC-
T ss_pred ecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCC-CCCCCccccCCCCCCC-
Confidence 65445789999999999999999999999999998888778887788899999999999995 567999865 46
Q ss_pred CCCeeeccC------CCceeeeCCCCc
Q psy6570 230 QSALCINLP------SSHTCLCPDHLT 250 (713)
Q Consensus 230 ~~~~C~~~~------g~~~C~C~~G~~ 250 (713)
+|+|+..| .+|+|+||.||.
T Consensus 657 -s~lCl~~p~~~~~~~~~~C~Cp~g~~ 682 (699)
T 1n7d_A 657 -QYLCLPAPQINPHSPKFTCACPDGML 682 (699)
T ss_dssp -TTCCBCCCCCTTCSCSCBCCCCSSCE
T ss_pred -CcccCcCcccCCCCCCcEEECcCCCE
Confidence 79999765 369999999998
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.94 E-value=8.4e-26 Score=238.31 Aligned_cols=204 Identities=20% Similarity=0.397 Sum_probs=179.3
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
.+.|+++++++.. +.++..+..|.+|++|+.+++|||+|. ..++|++++++|+..+.++..++..|.+||+|+.++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec---cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC
Confidence 4679999998854 555788999999999999999999999 789999999999988888877889999999999999
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
+|||+|...+ +|++++++|+.+++++...+..|++||||+.+++|||+|+.. ++|++++++|+.++++... .+..|
T Consensus 129 ~ly~~d~~~~-~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~~~P 205 (349)
T 3v64_C 129 KLYWTDSGTS-RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HLFWP 205 (349)
T ss_dssp EEEEEETTTT-EEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS--SCSCE
T ss_pred eEEEEcCCCC-eEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CCCCc
Confidence 9999999877 999999999999998888899999999999999999999988 9999999999988877654 35678
Q ss_pred eeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccc
Q psy6570 164 YKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQ 215 (713)
Q Consensus 164 ~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q 215 (713)
.||+++ +++|||+|+..++|++++..+.....++...+..|.+|+++.....
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly 259 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLY 259 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEE
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEE
Confidence 888886 7899999999999999998877666666667889999998654444
No 13
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.94 E-value=1.3e-25 Score=240.33 Aligned_cols=204 Identities=20% Similarity=0.397 Sum_probs=180.2
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
...|+++++++.. ..++..+..|.+|++|+.+++|||+|. ..++|++++++|+..+.++..++..|.+||||+.++
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC---CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 4689999998754 556788999999999999999999999 789999999999988888878889999999999999
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
.|||+|+..+ +|++++++|+.+++++...+..|++|+||+.+++|||+|+.. ++|++++++|+.++++... .+..|
T Consensus 172 ~lY~~d~~~~-~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~~~P 248 (386)
T 3v65_B 172 KLYWTDSGTS-RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HLFWP 248 (386)
T ss_dssp EEEEEETTTT-EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--SCSCE
T ss_pred eEEEEcCCCC-eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CCCCe
Confidence 9999999887 999999999999999888899999999999999999999988 9999999999998888754 35678
Q ss_pred eeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccc
Q psy6570 164 YKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQ 215 (713)
Q Consensus 164 ~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q 215 (713)
.||+++ +++|||+|+..++|++++..+.....++...+..|.+|+++....+
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly 302 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLY 302 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEE
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEE
Confidence 888875 7899999999999999998877666666667889999998655444
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.94 E-value=4.2e-25 Score=237.21 Aligned_cols=204 Identities=19% Similarity=0.351 Sum_probs=174.5
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC----ceEEEEEcCCCCCcceEEEc
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG----RKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~iavD 80 (713)
...|+++++++.. ..++..+..|.+|++|+.+++|||+|. ..++|++++++| ....+++...+..|.+||||
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD 167 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 167 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec---CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence 5788999998754 556888999999999999999999999 789999999998 34667776778999999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCCCCceeEEEecCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK-ARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
+.++.|||+|...+ +|++++++|+.+++++...+..|.+||||+..++|||+|+. .++|++++++|+.++++... .
T Consensus 168 ~~~~~lY~~d~~~~-~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~--~ 244 (400)
T 3p5b_L 168 WIHSNIYWTDSVLG-TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--N 244 (400)
T ss_dssp TTTTEEEEEETTTT-EEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS--S
T ss_pred ecCCceEEEECCCC-eEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC--C
Confidence 99999999999888 99999999999999998889999999999999999999986 48999999999998888765 3
Q ss_pred Cccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeec--cccccccEEEEeeccc
Q psy6570 160 GYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLAN--NLNRASDVLILQENKQ 215 (713)
Q Consensus 160 ~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~i~v~~~~~q 215 (713)
+..|.||+++ +++|||+|...++|++++..+.....++.. .+..|.+|+++....+
T Consensus 245 l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~ly 304 (400)
T 3p5b_L 245 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 304 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEE
Confidence 5678888877 789999999999999999887666555543 4678899988766555
No 15
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.93 E-value=5e-25 Score=253.48 Aligned_cols=204 Identities=19% Similarity=0.355 Sum_probs=174.1
Q ss_pred CCceeEEEccCc-ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc----eEEEEEcCCCCCcceEEEc
Q psy6570 6 SGNVTRVKREMN-LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR----KKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~-~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~----~~~~l~~~~~~~p~~iavD 80 (713)
...|+++++++. ...++..+..|.+|++|+..++|||+|. ..++|++++++|. ..++++...+..|.+||||
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~---~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec---cceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 467888888864 3556788999999999999999999999 7899999999984 4456676688999999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
+.+++|||+|+..+ +|++++++|+.+++|+...+..|.+||||+..++|||+|++. ++|++++++|+.+++++.. .
T Consensus 480 ~~~~~LY~tD~~~~-~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~--~ 556 (791)
T 3m0c_C 480 WIHSNIYWTDSVLG-TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--N 556 (791)
T ss_dssp TTTTEEEEEETTTT-EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--S
T ss_pred ecCCcEEEEecCCC-eEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC--C
Confidence 99999999999888 999999999999999988899999999999999999999876 8999999999999888765 3
Q ss_pred Cccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeec--cccccccEEEEeeccc
Q psy6570 160 GYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLAN--NLNRASDVLILQENKQ 215 (713)
Q Consensus 160 ~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~i~v~~~~~q 215 (713)
+..|.||+++ +++|||+|+..++|++++..+.....++.. .+..|.+|+++....+
T Consensus 557 l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lY 616 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 616 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEE
T ss_pred CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEE
Confidence 6688888887 789999999999999999987766666543 4678889988766555
No 16
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.93 E-value=4.5e-25 Score=229.05 Aligned_cols=204 Identities=23% Similarity=0.395 Sum_probs=174.5
Q ss_pred CCceeEEEccCc---ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE-EEEEcCCCCCcceEEEcC
Q psy6570 6 SGNVTRVKREMN---LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK-RTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 6 ~~~I~~~~~~~~---~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~-~~l~~~~~~~p~~iavD~ 81 (713)
...|.++++++. ..+++..+..|.+|++|+.+++|||+|. ..++|++++++|... +.++..++..|.+||+|+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~---~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV---SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET---TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC---CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 468999999985 2445778889999999999999999999 789999999999753 445556788999999999
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCCCCceeEEEecCCCC
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK-ARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
.++.|||+|...+ +|++++++|+.+++++...+..|++|++|+.+++|||+|+. .++|++++++|+.++++... .+
T Consensus 89 ~~g~ly~~d~~~~-~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~l 165 (318)
T 3sov_A 89 LGEKLYWTDSETN-RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS--EI 165 (318)
T ss_dssp TTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS--SC
T ss_pred CCCeEEEEECCCC-EEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC--CC
Confidence 9999999998877 99999999999999888889999999999999999999975 78999999999988887654 35
Q ss_pred ccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEEeeccc
Q psy6570 161 YKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQ 215 (713)
Q Consensus 161 ~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q 215 (713)
..|.||+++ +++|||+|...++|++++.++.....++...+..|.+|+++....+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 222 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEE
Confidence 678888876 7899999999999999998876655555557888999998765444
No 17
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.93 E-value=3.4e-24 Score=222.99 Aligned_cols=204 Identities=19% Similarity=0.351 Sum_probs=169.9
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC----ceEEEEEcCCCCCcceEEEc
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG----RKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~iavD 80 (713)
.+.|.++++++.. ..++..+..|.||++|+.+++|||+|. ..++|++++++| +..+.++..++..|.+||+|
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC---CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 5689999999854 455788999999999999999999999 789999999998 55566666678899999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
+.++.|||+|...+ +|++++++|+.+++++...+..|++|++|+.+++|||+|+.. ++|++++++|+.++++... .
T Consensus 86 ~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~--~ 162 (316)
T 1ijq_A 86 WIHSNIYWTDSVLG-TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--N 162 (316)
T ss_dssp TTTTEEEEEETTTT-EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--S
T ss_pred ecCCeEEEEECCCC-EEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC--C
Confidence 99999999998877 999999999998888887889999999999999999999876 8999999999988877654 3
Q ss_pred Cccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeec--cccccccEEEEeeccc
Q psy6570 160 GYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLAN--NLNRASDVLILQENKQ 215 (713)
Q Consensus 160 ~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~i~v~~~~~q 215 (713)
+..|.+|+++ +++|||+|...++|.+++..+.....++.. .+..|.+|++......
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly 222 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 222 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEE
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEE
Confidence 6688888887 789999999999999999886554444432 3677889888654333
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.93 E-value=2e-24 Score=219.43 Aligned_cols=207 Identities=26% Similarity=0.553 Sum_probs=174.9
Q ss_pred CCcccCCceeEEEccCcc-cEEe-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 1 MASISSGNVTRVKREMNL-KTVL-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~~~~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
|+|..+++|+++++++.. +.++ ..+..|.+|++|+.+++|||+|. ..++|.+++++|+..++++..++..|++|+
T Consensus 52 ~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~---~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~ 128 (267)
T 1npe_A 52 WTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS---QLDRIEVAKMDGTQRRVLFDTGLVNPRGIV 128 (267)
T ss_dssp EEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred EEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC---CCCEEEEEEcCCCCEEEEEECCCCCccEEE
Confidence 467778899999998864 3333 46789999999999999999999 788999999999887777766778999999
Q ss_pred EcCCCCcEEEEccCC-CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC
Q psy6570 79 LEPLSGRMFWTELGI-KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE 157 (713)
Q Consensus 79 vD~~~~~ly~td~~~-~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~ 157 (713)
+|+.+++|||+++.. ..+|+++++||+.++++....+..|++|++|+.+++|||+|...++|++++++|..+..+...
T Consensus 129 vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~- 207 (267)
T 1npe_A 129 TDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG- 207 (267)
T ss_dssp EETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-
T ss_pred EeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-
Confidence 999899999999873 349999999999888887677889999999998999999999999999999999877666543
Q ss_pred CCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeeecc-ccccccEEEEeec
Q psy6570 158 DNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANN-LNRASDVLILQEN 213 (713)
Q Consensus 158 ~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~i~v~~~~ 213 (713)
+..|.+|++++++|||+++..++|+++++.++.....+..+ ...|.+|++.++.
T Consensus 208 --~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 208 --LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp --CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred --CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 56899999999999999999999999998877666655443 3468888876543
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.89 E-value=7.3e-22 Score=200.40 Aligned_cols=198 Identities=27% Similarity=0.388 Sum_probs=163.5
Q ss_pred CCceeEEEccCccc-------EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 6 SGNVTRVKREMNLK-------TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 6 ~~~I~~~~~~~~~~-------~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
.++|+++++++... .+......|.+|++|+.+++|||+|. ..++|.+++++|...+.++..++..|.+|+
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia 85 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGGEPTTIIRQDLGSPEGIA 85 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET---TTTEEEEEESSSCCCEEEECTTCCCEEEEE
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC---CCCEEEEEecCCCCcEEEEECCCCCccEEE
Confidence 45899999998532 12234578999999999999999999 789999999999877777766778999999
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC--CCcEEEEeCCCCceeEEEec
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK--ARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~--~~~I~~~~~~g~~~~~~~~~ 156 (713)
+|+.+++|||+|...+ +|.+++++|+.+++++...+..|++|++|+.+++|||++.. .++|++++++|..++++...
T Consensus 86 ~d~~~~~lyv~d~~~~-~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLD-RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp EETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred EEecCCeEEEEECCCC-EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 9998999999998877 99999999998888877678899999999989999999986 68999999999887776543
Q ss_pred CCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEE
Q psy6570 157 EDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210 (713)
Q Consensus 157 ~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~ 210 (713)
.+..|.+|+++ +++|||++...++|++++..+..... +...+..|.+|.+.
T Consensus 165 --~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~-~~~~~~~P~gi~~d 217 (267)
T 1npe_A 165 --NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK-VLEGLQYPFAVTSY 217 (267)
T ss_dssp --TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE-EEECCCSEEEEEEE
T ss_pred --CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE-EecCCCCceEEEEe
Confidence 35678888886 57999999999999999987544333 33355667777654
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.88 E-value=1.2e-22 Score=233.08 Aligned_cols=204 Identities=19% Similarity=0.344 Sum_probs=167.5
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC----ceEEEEEcCCCCCcceEEEc
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG----RKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~iavD 80 (713)
.+.|+++++++.. ..++..+..|.+|++|+.+++|||+|. ..++|++++++| .....++...+..|.+||||
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~---~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT---TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec---CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 4578899988754 344677899999999999999999999 788999999997 44555555567889999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
+..++|||+|...+ +|++++++|+.+++++...+..|++||||+..++|||+|+.. ++|++++++|+.+++++.. .
T Consensus 462 ~~~g~LY~tD~~~~-~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~--~ 538 (699)
T 1n7d_A 462 WIHSNIYWTDSVLG-TVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--N 538 (699)
T ss_dssp CSSSBCEECCTTTS-CEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS--S
T ss_pred eeCCcEEEEeccCC-eEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC--C
Confidence 99999999998877 999999999998888877889999999999999999999876 8999999999988877654 3
Q ss_pred Cccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeee--ccccccccEEEEeeccc
Q psy6570 160 GYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLA--NNLNRASDVLILQENKQ 215 (713)
Q Consensus 160 ~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~v~~~~~q 215 (713)
+..|.||+++ +++|||+|+..++|++++..+.....++. ..+..|.+|.++....+
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 598 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEE
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEE
Confidence 5678888876 68999999999999999987655554443 23677888888765444
No 21
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.83 E-value=2.9e-21 Score=198.54 Aligned_cols=160 Identities=35% Similarity=0.953 Sum_probs=84.7
Q ss_pred CCCCCCCCCCCCCC-eeecCCCCCCeeecCCCcccCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCc
Q psy6570 306 VAPARTCYLDCNHG-TCEFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384 (713)
Q Consensus 306 ~~~~~~C~~~C~~~-~C~~~~~~~~~C~C~~g~~G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~ 384 (713)
.|...+|.++|.++ .|.. .+.|.|++||+|..|+...|.. +|.++|.|.. .+.|.|++||+|..|+.
T Consensus 145 ~C~~~~C~~~C~~~G~C~~----~~~C~C~~G~~G~~C~~~~C~~-~C~~~G~C~~-------~~~C~C~~G~~G~~C~~ 212 (324)
T 2ygq_A 145 TCQQAECPGGCRNGGFCNE----RRICECPDGFHGPHCEKALCTP-RCMNGGLCVT-------PGFCICPPGFYGVNCDK 212 (324)
T ss_dssp EECCCCCSSCCCSSCEECT----TSCEECCTTEESSSSCEESSSS-CCCTTCEECS-------SCCEECCTTCBTTTTCB
T ss_pred cccCCCCCCCCCCCCEECC----CCeEECCCCCcCCCCCCCCCCC-CCCCCCEEcC-------CCEEeCCCCccCCCccc
Confidence 34456777889875 9975 2789999999999999877765 8999999975 35799999999999998
Q ss_pred cCCCCCCCCCCEEEcCCCeeeCCCCCccCCCC--cCCCCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCC-CCC
Q psy6570 385 RICENKCHNGGTCIATTQTCVCPPGFTGDTCQ--QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYC-VNG 461 (713)
Q Consensus 385 ~~C~~~C~~~~~C~~~~~~C~C~~g~~g~~C~--~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~-~~~ 461 (713)
..|..+|.++|+|+. .+.|.|++||+|..|+ +|. .+|.+++.|+. .++|.|++||+|..|+.+.|...| .+|
T Consensus 213 ~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~g 287 (324)
T 2ygq_A 213 ANCSTTCFNGGTCFY-PGKCICPPGLEGEQCEISKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCSKPVCEPGCGAHG 287 (324)
T ss_dssp CCCSSCCCSSCCBSC-SSCBCCCTTCCTTTTC------------------------------------------------
T ss_pred CcCCCCCCCCCeeCC-CCeeeCCCCccCCCCCcCcCC-CcCCCCCEECC---CCEEECCCCCcCCCCcCCCCCCCCCCCC
Confidence 889999999999987 6899999999999998 675 57999999985 469999999999999988887666 568
Q ss_pred eeecCCCCCeecCCCCccCCCCCC
Q psy6570 462 ECSITDSGPKCMCSPGYSGKKCDT 485 (713)
Q Consensus 462 ~C~~~~~~~~C~C~~G~~g~~C~~ 485 (713)
+|.+ .++|.|.+||+|..|+.
T Consensus 288 ~C~~---~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 288 TCHE---PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ------------------------
T ss_pred EECC---CCEeECCCCCcCCCCCC
Confidence 8875 35899999999988875
No 22
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.82 E-value=1.5e-24 Score=210.43 Aligned_cols=239 Identities=9% Similarity=0.005 Sum_probs=165.2
Q ss_pred CeeecCCC---cccCCccccCC-CCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCccC--CC-CCCCCCCEEEcCC
Q psy6570 329 PHCICQEN---FYGTYCEKVNN-SMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI--CE-NKCHNGGTCIATT 401 (713)
Q Consensus 329 ~~C~C~~g---~~G~~C~~~~c-~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~~--C~-~~C~~~~~C~~~~ 401 (713)
+.+.|.+| +.|..++.... ...+|.++|+|++... +|.|.|++||+|..|+..+ |+ .++...+.|.+ .
T Consensus 13 ~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~----~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~n-g 87 (267)
T 4fbr_A 13 SQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTM----TYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQP-G 87 (267)
T ss_dssp TTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE----EETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEE-E
T ss_pred ccCCcCCCCceeeccccccccccCCCCcCCCCeecCCCC----CeEEeCCCCcccccccccccccccccCcCCCcccC-C
Confidence 67777777 55666665442 2337889999988755 7999999999999998654 43 22223344554 2
Q ss_pred CeeeCCCCCccCCCC---cCCCCCCCCCcEeccCCCCccccCCCCCcCCCCc--cCCCCCC--CCCCeeecCCCCCeecC
Q psy6570 402 QTCVCPPGFTGDTCQ---QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKNY--CVNGECSITDSGPKCMC 474 (713)
Q Consensus 402 ~~C~C~~g~~g~~C~---~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~--~~~C~~~--~~~~~C~~~~~~~~C~C 474 (713)
++| |.|..|+ +|.+.||.++++|++...+|+|+|++||+|..|+ +++|... +..+.|.+ +
T Consensus 88 gtc-----~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~n--------g 154 (267)
T 4fbr_A 88 GVW-----VLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHS--------G 154 (267)
T ss_dssp EEE-----ECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEE--------E
T ss_pred Cee-----eccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccC--------C
Confidence 233 4677777 7999999999999999999999999999999998 3454433 33333332 1
Q ss_pred CCCccCCCCCCccccCCCCCCcccCCCCccCCCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCC
Q psy6570 475 SPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANK 554 (713)
Q Consensus 475 ~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~ 554 (713)
..+|.|.+|+... .|...+|.++|+|++...+|+|.|++||+|..|+.. +++
T Consensus 155 g~c~~G~~c~~~i-------------------~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~---------i~e 206 (267)
T 4fbr_A 155 GVWVLGTRGKQNV-------------------INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPD---------TYT 206 (267)
T ss_dssp EEEECCSSTTSCE-------------------EEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETT---------EEE
T ss_pred cceeccccccccc-------------------ccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccc---------cce
Confidence 1123455555421 133457899999999888999999999999999855 344
Q ss_pred CCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCCCCCCCCCCCCeEecCCCCcceeecCCCcccC
Q psy6570 555 CTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGI 624 (713)
Q Consensus 555 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~C~~~C~~~g~C~~~~~g~~~C~C~~G~~G~ 624 (713)
|+...+...+.|.+. +.+.+.|+.++.+..| ..+|.++|+|++.. .+|.|+|++||+|+
T Consensus 207 c~~~~~c~~~~c~~g-G~~~~~C~~g~n~~~c---------~~~c~ngGtC~dg~-~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 207 VENQWGGSTAPWNPG-GFWMIGARNGQNVVAL---------NVASSDGGKTLAGT-MIYNGEGPIGFRAR 265 (267)
T ss_dssp EEEECSCTTSCCEEE-EEEECCCCTTCCEEEE---------EEECSSTTSEEEEE-EEETTSCCEEEEEE
T ss_pred eccCCCccCCcccCC-CeEEEecCCCCccccC---------CcCCCCCCEeeCCC-cceeecCCCCcccc
Confidence 432222222333322 3345668888765544 33578899999876 79999999999985
No 23
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.81 E-value=3.1e-20 Score=190.82 Aligned_cols=166 Identities=36% Similarity=0.927 Sum_probs=86.5
Q ss_pred cccCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCccCCCCCCCCCCEEEcCCCeeeCCCCCccCCCC
Q psy6570 337 FYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDTCQ 416 (713)
Q Consensus 337 ~~G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~~C~~~C~~~~~C~~~~~~C~C~~g~~g~~C~ 416 (713)
+.++.|....|. .+|.++|.|.. .+.|.|++||+|..|+...|..+|.++|+|+. ++.|.|++||+|..|+
T Consensus 141 ~~~~~C~~~~C~-~~C~~~G~C~~-------~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~ 211 (324)
T 2ygq_A 141 IFFKTCQQAECP-GGCRNGGFCNE-------RRICECPDGFHGPHCEKALCTPRCMNGGLCVT-PGFCICPPGFYGVNCD 211 (324)
T ss_dssp EEEEEECCCCCS-SCCCSSCEECT-------TSCEECCTTEESSSSCEESSSSCCCTTCEECS-SCCEECCTTCBTTTTC
T ss_pred cccccccCCCCC-CCCCCCCEECC-------CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcC-CCEEeCCCCccCCCcc
Confidence 344556555564 48999999975 36899999999999998889999999999987 7899999999999998
Q ss_pred --cCCCCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCCC-CCeeecCCCCCeecCCCCccCCCCCCccccCCCC
Q psy6570 417 --QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCV-NGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDS 493 (713)
Q Consensus 417 --~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~-~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~ 493 (713)
.|. .+|.++|+|++. ++|.|++||+|..|++++|...|. ++.|.. .++|.|.+||+|+.|+...
T Consensus 212 ~~~C~-~~C~~~G~C~~~---~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~------ 278 (324)
T 2ygq_A 212 KANCS-TTCFNGGTCFYP---GKCICPPGLEGEQCEISKCPQPCRNGGKCIG---KSKCKCSKGYQGDLCSKPV------ 278 (324)
T ss_dssp BCCCS-SCCCSSCCBSCS---SCBCCCTTCCTTTTC--------------------------------------------
T ss_pred cCcCC-CCCCCCCeeCCC---CeeeCCCCccCCCCCcCcCCCcCCCCCEECC---CCEEECCCCCcCCCCcCCC------
Confidence 575 579999999874 589999999999999888876654 477874 4689999999999887532
Q ss_pred CCcccCCCCccCCCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCccc
Q psy6570 494 GPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 494 ~~~C~C~~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~ 542 (713)
|. .+|.++|+|++ .++|.|++||+|..|+..
T Consensus 279 --------------C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~ 309 (324)
T 2ygq_A 279 --------------CE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNKR 309 (324)
T ss_dssp -------------------------------------------------
T ss_pred --------------CC-CCCCCCCEECC---CCEeECCCCCcCCCCCCC
Confidence 22 26888899986 479999999999999854
No 24
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.78 E-value=8.2e-24 Score=205.28 Aligned_cols=246 Identities=9% Similarity=-0.029 Sum_probs=161.8
Q ss_pred eeeccCCCceeeeCCCCccccccCCCCCcccCCCCCCCCCccCCCCCCCCCCcccCCCCCCCccccCCCCccCCCC--CC
Q psy6570 233 LCINLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAP--AR 310 (713)
Q Consensus 233 ~C~~~~g~~~C~C~~G~~~~~~~~~~~c~C~~~~~~~~~~~~~~~~~~~~~~c~C~~~~~~~~c~C~~g~~~~~~~--~~ 310 (713)
.+.|..|++++.+.+|....+ ...+..++...+.++....+|.++...|.|.|++||+|..|+ ++
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~-------------g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ 71 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLI-------------GARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNY 71 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEEC-------------CCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEE
T ss_pred eEeecCCcccCCcCCCCceee-------------ccccccccccCCCCcCCCCeecCCCCCeEEeCCCCccccccccccc
Confidence 356778888888888743210 011112222334455667889999999999999999999885 45
Q ss_pred CCC--CCCCCCeeecCCCCCCeeecCCCcccCCccccC-CCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCccC-
Q psy6570 311 TCY--LDCNHGTCEFDDDFDPHCICQENFYGTYCEKVN-NSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRI- 386 (713)
Q Consensus 311 ~C~--~~C~~~~C~~~~~~~~~C~C~~g~~G~~C~~~~-c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~~- 386 (713)
+|. ..|....|.+- +.| |.|..|++.+ |...||+++++|++... +|+|+|++||+|..|+..+
T Consensus 72 ec~~~~~c~s~pC~ng----gtc-----~~G~~c~~~~eC~s~pC~ngG~C~~~~~----sy~C~C~~Gf~G~~Ce~~~d 138 (267)
T 4fbr_A 72 TVENQWGGTSAPWQPG----GVW-----VLGARDKQNIVAVSIKSNDGGKTLTGTT----TYNGEGPIGFKSEVTDGDTY 138 (267)
T ss_dssp EEEEESSSTTSCEEEE----EEE-----ECCCCSSCCEEEEEEECSSTTSEEEEEE----EETTSCCEEEEEEECCCCEE
T ss_pred ccccccCcCCCcccCC----Cee-----eccCccccccccCCCCCCCCCEEecCCc----cEEeeCCCCccccCCCCCcc
Confidence 642 12333344331 122 4577787654 78889999999998655 7999999999999998654
Q ss_pred -CC-CCCCCCCEEEcCCCeeeCCCCCccCCCC---cCCCCCCCCCcEeccCCCCccccCCCCCcCCCCc--cCCCCCC--
Q psy6570 387 -CE-NKCHNGGTCIATTQTCVCPPGFTGDTCQ---QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKNY-- 457 (713)
Q Consensus 387 -C~-~~C~~~~~C~~~~~~C~C~~g~~g~~C~---~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~--~~~C~~~-- 457 (713)
|+ ..+...+.|.+ +...|.|.+|+ .|.+.+|.++++|++...+|+|+|++||+|..|+ +++|...
T Consensus 139 ~C~n~~~c~s~pC~n------gg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~ 212 (267)
T 4fbr_A 139 SVENQWGGSAAPWHS------GGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWG 212 (267)
T ss_dssp EEEEECSSTTSCCEE------EEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECS
T ss_pred cccccCCcCCccccC------CcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCC
Confidence 43 22222333333 12223466666 5667789999999999999999999999999997 3444322
Q ss_pred CCCCeeecCCCCCeecCCCCccCCCCCCccccCCCCCCcccCCCCccCCCCCCCCCCCCcEEcCCCCCeeccCCCCCCCC
Q psy6570 458 CVNGECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGR 537 (713)
Q Consensus 458 ~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~ 537 (713)
+..+.|.+. +.+.+.|. +|+.+..|+ .+|.++|+|++...+|.|.|++||+|.
T Consensus 213 c~~~~c~~g-G~~~~~C~-------------------------~g~n~~~c~-~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 213 GSTAPWNPG-GFWMIGAR-------------------------NGQNVVALN-VASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp CTTSCCEEE-EEEECCCC-------------------------TTCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred ccCCcccCC-CeEEEecC-------------------------CCCccccCC-cCCCCCCEeeCCCcceeecCCCCcccc
Confidence 222333221 22233344 444444332 278899999988789999999999875
No 25
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.78 E-value=4e-18 Score=174.54 Aligned_cols=172 Identities=8% Similarity=0.162 Sum_probs=137.5
Q ss_pred ccCCceeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 4 ISSGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.....|+++++++.... +..... +++||.++.|||++. ....|++++++|..+++|+.. +..++++|.
T Consensus 126 ~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~ 194 (302)
T 3s25_A 126 QTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEALFYDC----NCYKPVVLD 194 (302)
T ss_dssp SSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT---TTCCEEEEETTTTEEEEEECS----CEEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC---CCceEEEEECCCCCEEEEeCC----Cccceeeec
Confidence 45788999999985543 333222 567999999999998 678999999999998877642 334567788
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEE-cCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWA-DPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~-d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
.++|||+++...++|+++++||+.+++|+...+ | .|++.+++|||+ +.....|+++++||+.++.|...
T Consensus 195 g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~----- 264 (302)
T 3s25_A 195 DTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG----- 264 (302)
T ss_dssp TTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES-----
T ss_pred CCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC-----
Confidence 999999998866799999999999988865444 2 367779999997 56678999999999999888754
Q ss_pred cceeeeeeCCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 162 KPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 162 ~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
...+|++++++|||+++..+.|++++.+|....++
T Consensus 265 ~~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~~l 299 (302)
T 3s25_A 265 EFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKA 299 (302)
T ss_dssp CEEEEEECSSEEEEEETTTCCEEEEESSSCCSCEE
T ss_pred ccceEEEeCCEEEEEECCCCeEEEEECCCCCceEe
Confidence 23589999999999999999999998776655443
No 26
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.77 E-value=4.8e-20 Score=175.23 Aligned_cols=146 Identities=21% Similarity=0.452 Sum_probs=122.0
Q ss_pred CCCCCCCCcEEcCCCCCeeccCCCCCCCC---CCcccCCCCCCCCCCCCCC----CCCCCCCcEEeecC-----CCceee
Q psy6570 509 DTCTCLNGGTCIPNSKNNVCKCPSQYTGR---RCECAVGDTSCASLANKCT----PNYCSNNGTCVLIE-----GKPSCK 576 (713)
Q Consensus 509 ~~~~C~~~g~C~~~~~~~~C~C~~g~~G~---~C~~~~~~~~c~~~~~~C~----~~~C~~~~~C~~~~-----g~~~C~ 576 (713)
...||.+ |+|++..++|+|.|++||+|. .|+ + +++|. ..+|.++++|+++. ++|+|.
T Consensus 9 ~~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~---------id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~ 77 (186)
T 1z1y_A 9 VDTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-E---------XNECXXETLGXACGEFGQCIENPDPAQVNMYXCG 77 (186)
T ss_dssp TTCCCBT-EEEEECSSCEEEEECTTEEEEETTEEE-E---------CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEE
T ss_pred CCCCCCC-CEeECCCCCeEeECCCCCccCCCCccC-C---------CCcccCCCCCCCCCCCCEeecCCCCcCCCCEECC
Confidence 3568885 599999999999999999987 665 2 47888 67899999999998 899999
Q ss_pred CCCCCcCCCCCcCCCCCCC-CCCCCCCCeEe----cCCCCcceeecCCCccc-----CCCCcC--CCCCCCC-CCCCeec
Q psy6570 577 CLPPYSGKQCTEREDSPSC-HNYCDNAGLCS----YSKQGKPVCTCVNGWSG-----ITCSER--VSCAHFC-FNGGTCR 643 (713)
Q Consensus 577 C~~G~~G~~C~~~~~~~~C-~~~C~~~g~C~----~~~~g~~~C~C~~G~~G-----~~C~~~--~~C~~~C-~~~~~C~ 643 (713)
|++||+|..+... +++| ..+|.++++|+ +.. ++|+|.|++||+| ..|+++ ++|.++| .++++|+
T Consensus 78 C~~G~~g~~~~C~--~d~C~~~~C~~~g~C~~~~~~~~-g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~ 154 (186)
T 1z1y_A 78 CIEGYTLXEDTCV--LDVCQYXNCGESGECIVEYLSEI-QSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCX 154 (186)
T ss_dssp ECTTEEEETTEEE--EGGGTTCCCCTTEEEEEEEETTE-EEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEE
T ss_pred CCCCCccCCCCCC--CCcCcCCCCCCCCEEeeCCcCCC-CCceEECCCCCcccCCCCCcceEcCCCcccccccccCccee
Confidence 9999999865322 3778 56799999998 554 8999999999998 789875 6798899 8889998
Q ss_pred CCCCccCCCCCceeeCCCCcccCCCCccccc
Q psy6570 644 EQNYSLDPDLKPICICPRGYAGVRCQTLVHY 674 (713)
Q Consensus 644 ~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~~~ 674 (713)
+ ..++|+|.|++||+|+.|+.....
T Consensus 155 n------~~g~y~C~C~~G~~g~~~~~~~~~ 179 (186)
T 1z1y_A 155 N------VEGVYXCQCMEGFTFDXEXNVCLG 179 (186)
T ss_dssp E------ETTEEEEEECTTCEEETTTTEEES
T ss_pred c------CCCCeeeECCCCCccCcccccCCc
Confidence 7 456699999999999999876543
No 27
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.76 E-value=2.9e-19 Score=166.24 Aligned_cols=145 Identities=28% Similarity=0.683 Sum_probs=84.6
Q ss_pred CeeeCCCCCccCCCC-cCCCC-CCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCC--CCCeeecCCCCCeecCCCC
Q psy6570 402 QTCVCPPGFTGDTCQ-QCLNL-KCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYC--VNGECSITDSGPKCMCSPG 477 (713)
Q Consensus 402 ~~C~C~~g~~g~~C~-~C~~~-~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~--~~~~C~~~~~~~~C~C~~G 477 (713)
+.|.|++||+|..|+ +|.+. .|..+++|.. ..+|+|++||+|..|+.++|...| .++.|.+ .++|.|++|
T Consensus 17 ~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~---~~~C~C~~G 90 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKL---PGDCRCQYG 90 (169)
T ss_dssp ----CCTTEETTTTCEECCCEEETTEEEEECS---SCCEEECTTEESTTSCEECCCTTCCTTTEECSS---TTCCEECTT
T ss_pred eeeeCCCcCcCCCcccccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCC---CCeeECCCC
Confidence 445555555555554 34332 3445555543 125666666666666555555443 4555544 356777777
Q ss_pred ccCCCCCCccccCCCCCCcccCCCCccCCCCCCC-CCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCC
Q psy6570 478 YSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTC-TCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCT 556 (713)
Q Consensus 478 ~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~-~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~ 556 (713)
|+|..|+++. .. .|.+ ++|+ ++++|.|++||+|..|+.+ +++|.
T Consensus 91 ~~G~~C~~C~----------------------~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~~~---------~~~C~ 135 (169)
T 2vj2_A 91 WQGLYCDKCI----------------------PHPGCVH-GICN---EPWQCLCETNWGGQLCDKD---------LNYCG 135 (169)
T ss_dssp EESSSSCEEC----------------------CCTTCSS-EECS---STTCCEECTTEETTTTCEE---------SCHHH
T ss_pred CCCCCcccCC----------------------CCCCCCC-CCcC---CCCEEeCCCCCCCCcccCC---------CCCCC
Confidence 7776665311 11 2443 3665 3577888888888877644 45665
Q ss_pred C-CCCCCCcEEeec-CCCceeeCCCCCcCCCCC
Q psy6570 557 P-NYCSNNGTCVLI-EGKPSCKCLPPYSGKQCT 587 (713)
Q Consensus 557 ~-~~C~~~~~C~~~-~g~~~C~C~~G~~G~~C~ 587 (713)
. .+|.++|+|+++ .++|+|.|++||+|+.|+
T Consensus 136 ~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 136 THQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp HTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 3 678777888875 677888888888887775
No 28
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.75 E-value=3.9e-19 Score=165.38 Aligned_cols=144 Identities=28% Similarity=0.735 Sum_probs=111.4
Q ss_pred CCeeecCCCcccCCccccCCCC-CCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCccCCCCCCC-CCCEEEcCCCeee
Q psy6570 328 DPHCICQENFYGTYCEKVNNSM-CPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCH-NGGTCIATTQTCV 405 (713)
Q Consensus 328 ~~~C~C~~g~~G~~C~~~~c~~-~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~~C~~~C~-~~~~C~~~~~~C~ 405 (713)
.+.|.|++||+|+.|+.. |.. .+|.+++.|.. ..+|.|++||+|..|+..+|...|. .++.|++ +++|.
T Consensus 16 ~~~c~C~~g~~G~~C~~~-C~~~~~c~~~g~C~~-------~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~-~~~C~ 86 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKF-CRPRDDFFGHYACDQ-------NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKL-PGDCR 86 (169)
T ss_dssp -----CCTTEETTTTCEE-CCCEEETTEEEEECS-------SCCEEECTTEESTTSCEECCCTTCCTTTEECSS-TTCCE
T ss_pred CeeeeCCCcCcCCCcccc-cCCCCCcCCCCEeCC-------CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCC-CCeeE
Confidence 368999999999988753 332 25777788854 2479999999999999888888886 6788887 78999
Q ss_pred CCCCCccCCCCcCCCCC-CCCCcEeccCCCCccccCCCCCcCCCCc--cCCCCC--CC-CCCeeecC-CCCCeecCCCCc
Q psy6570 406 CPPGFTGDTCQQCLNLK-CQNGGVCVNKTTGLECDCPKFYYGKNCQ--YSQCKN--YC-VNGECSIT-DSGPKCMCSPGY 478 (713)
Q Consensus 406 C~~g~~g~~C~~C~~~~-C~~~~~C~~~~~~~~C~C~~G~~g~~C~--~~~C~~--~~-~~~~C~~~-~~~~~C~C~~G~ 478 (713)
|++||+|..|++|...+ |.+ ++|+ ++|+|+|++||+|..|+ +++|.. .| ++++|+++ .++|+|.|++||
T Consensus 87 C~~G~~G~~C~~C~~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~ 162 (169)
T 2vj2_A 87 CQYGWQGLYCDKCIPHPGCVH-GICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGY 162 (169)
T ss_dssp ECTTEESSSSCEECCCTTCSS-EECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTC
T ss_pred CCCCCCCCCcccCCCCCCCCC-CCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCC
Confidence 99999999999887776 775 4887 46899999999999997 566763 35 45889986 778999999999
Q ss_pred cCCCCC
Q psy6570 479 SGKKCD 484 (713)
Q Consensus 479 ~g~~C~ 484 (713)
+|+.|+
T Consensus 163 ~G~~Ce 168 (169)
T 2vj2_A 163 SGPNCE 168 (169)
T ss_dssp CSTTSC
T ss_pred cCcCcC
Confidence 998876
No 29
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.75 E-value=5e-18 Score=151.86 Aligned_cols=116 Identities=31% Similarity=0.753 Sum_probs=100.3
Q ss_pred CCCC--CCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEeecCCCceeeCCCCCcC
Q psy6570 506 KKCD--TCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSG 583 (713)
Q Consensus 506 ~~C~--~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 583 (713)
++|. ..+|.++++|++..++|+|.|++||+|..|+.+ +++|..++|.++++|++..++|+|.|++||+|
T Consensus 6 deC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~---------~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID---------VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 76 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE---------CCTTTTCCCCSSCEEEECSSCEEEECCTTEES
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccccc---------CccCCCCCCCCCCEEeCCCCCceeeCCCCCcC
Confidence 4565 568999999999999999999999999999865 57899899999999999999999999999999
Q ss_pred CCCCcCCCCCCC-CCCCCCCCeEecCCCCcceeecCCCcccCCCC-cCCCCC
Q psy6570 584 KQCTEREDSPSC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS-ERVSCA 633 (713)
Q Consensus 584 ~~C~~~~~~~~C-~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~-~~~~C~ 633 (713)
..|+.. .++| ..+|.++++|++.. ++|+|.|++||+|..|+ ++++|.
T Consensus 77 ~~C~~~--~~~C~~~~C~~~g~C~~~~-g~~~C~C~~G~~G~~C~~~i~~C~ 125 (135)
T 2vj3_A 77 VHCEVN--TDECASSPCLHNGRCLDKI-NEFQCECPTGFTGHLCQVDLHHIL 125 (135)
T ss_dssp SSSCEE--CCTTTTCCSTTTCEEEECS-SCEEEECCTTEESSSSCEECC---
T ss_pred Ccceec--CCcccCCCcCCCCEeECCC-CCeEEECCCCCcCCccCccCcccc
Confidence 999742 3778 67899999999876 89999999999999997 566675
No 30
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.74 E-value=7.7e-18 Score=150.65 Aligned_cols=118 Identities=31% Similarity=0.783 Sum_probs=99.6
Q ss_pred CCCCC--CCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCCCC-CCCCCCCCeEecCCCCcceeecCCCcccCCCC-
Q psy6570 552 ANKCT--PNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS- 627 (713)
Q Consensus 552 ~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~C-~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~- 627 (713)
+++|. .++|.++|+|++..++|+|.|++||+|..|+.. .++| ..+|.++++|++.. ++|+|.|++||+|..|+
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~--~~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~C~~ 81 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID--VNECVSNPCQNDATCLDQI-GEFQCICMPGYEGVHCEV 81 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE--CCTTTTCCCCSSCEEEECS-SCEEEECCTTEESSSSCE
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccccc--CccCCCCCCCCCCEEeCCC-CCceeeCCCCCcCCccee
Confidence 68898 679999999999999999999999999999732 3788 67899999999886 89999999999999998
Q ss_pred cCCCCC-CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCccccccccc
Q psy6570 628 ERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVHYISKK 678 (713)
Q Consensus 628 ~~~~C~-~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~~~~~~~ 678 (713)
++++|. .+|.++++|++ ..++|+|.|++||+|.+|+.++......
T Consensus 82 ~~~~C~~~~C~~~g~C~~------~~g~~~C~C~~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 82 NTDECASSPCLHNGRCLD------KINEFQCECPTGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp ECCTTTTCCSTTTCEEEE------CSSCEEEECCTTEESSSSCEECC-----
T ss_pred cCCcccCCCcCCCCEeEC------CCCCeEEECCCCCcCCccCccCccccCC
Confidence 567886 78999999987 3456999999999999999877666543
No 31
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=5.9e-17 Score=175.33 Aligned_cols=185 Identities=15% Similarity=0.155 Sum_probs=142.6
Q ss_pred CcccCCceeEEEccCc-ccEEecCCCCCceEEEeccCCeEEEeecCCC-CCCeEEEEecCCceE--EEEEcCCCCCcceE
Q psy6570 2 ASISSGNVTRVKREMN-LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGR-SSNNIMVSTLEGRKK--RTLLNTGLNEPYDI 77 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~-~~~~~~~~~~p~gla~D~~~~~ly~td~~~~-~~~~I~~~~~~G~~~--~~l~~~~~~~p~~i 77 (713)
+|.. ++|+++++++. ...+...+..|.+|++|+.+++|||+|.... ....|++++.+|... ..+. .+..|.+|
T Consensus 155 ~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--~~~~p~gi 231 (430)
T 3tc9_A 155 VGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--KGQNCNGA 231 (430)
T ss_dssp EEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--ECSSCCCE
T ss_pred EeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--cCCCceEE
Confidence 3444 78999999874 3555778889999999998888999997321 123577788888664 3333 36889999
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeC-CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-----ee
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDN-NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-----RF 151 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-----~~ 151 (713)
++||.+++|||+|++.+ +|+++++++.....++.. ...+|++|+||+..++|||+|...++|+++++++.. ..
T Consensus 232 avdp~~g~lyv~d~~~~-~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 232 ETHPINGELYFNSWNAG-QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp EECTTTCCEEEEETTTT-EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred EEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 99998999999999888 999999998766444432 456899999999888899999999999999998752 22
Q ss_pred EEEec------------CCCCccce-eeeee---------CCeEEEEeCCCCcEEEEcccC
Q psy6570 152 VVYHT------------EDNGYKPY-KLEVF---------EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 152 ~~~~~------------~~~~~~p~-~i~~~---------~~~ly~td~~~~~i~~~~~~~ 190 (713)
++... ...+..|. +++++ ++.|||+|+.+++|+++++.+
T Consensus 311 ~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G 371 (430)
T 3tc9_A 311 IVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG 371 (430)
T ss_dssp EEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS
T ss_pred EEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC
Confidence 33321 11366788 78875 368999999999999998653
No 32
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.74 E-value=1.6e-19 Score=171.68 Aligned_cols=141 Identities=24% Similarity=0.599 Sum_probs=112.7
Q ss_pred CCCCeeecCCCCCeecCCCCccCC---CCCCccccCCCCCCcccCCCCccCCCCC----CCCCCCCcEEcCCC-----CC
Q psy6570 458 CVNGECSITDSGPKCMCSPGYSGK---KCDTCTCLNGDSGPKCMCSPGYSGKKCD----TCTCLNGGTCIPNS-----KN 525 (713)
Q Consensus 458 ~~~~~C~~~~~~~~C~C~~G~~g~---~C~~~~C~~~~~~~~C~C~~G~~g~~C~----~~~C~~~g~C~~~~-----~~ 525 (713)
|.+++|+++.++|+|.|++||+|. .|+. -++|. ..+|.++++|++.. ++
T Consensus 13 C~ng~C~~~~g~~~C~C~~G~~g~~~~~C~~-------------------id~C~~~~~~~~C~~~~~C~~~~~~~~~g~ 73 (186)
T 1z1y_A 13 CXNGQLVQMSNHFXCMCNEGLVHLSENTCEE-------------------XNECXXETLGXACGEFGQCIENPDPAQVNM 73 (186)
T ss_dssp CBTEEEEECSSCEEEEECTTEEEEETTEEEE-------------------CCCCSGGGTTSEEETTEEEEECSSTTSSCS
T ss_pred CCCCEeECCCCCeEeECCCCCccCCCCccCC-------------------CCcccCCCCCCCCCCCCEeecCCCCcCCCC
Confidence 445677777777777777777765 3321 13454 45788899999998 89
Q ss_pred eeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEe----ecCCCceeeCCCCCcC-----CCCCcCCCCCCCC
Q psy6570 526 NVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCV----LIEGKPSCKCLPPYSG-----KQCTEREDSPSCH 596 (713)
Q Consensus 526 ~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~----~~~g~~~C~C~~G~~G-----~~C~~~~~~~~C~ 596 (713)
|+|.|++||+|..+++. +++|...+|.++++|+ +..++|+|.|++||+| ..|+++ +.++|.
T Consensus 74 y~C~C~~G~~g~~~~C~---------~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-~~~~C~ 143 (186)
T 1z1y_A 74 YXCGCIEGYTLXEDTCV---------LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-GETACQ 143 (186)
T ss_dssp EEEEECTTEEEETTEEE---------EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-ECCCCC
T ss_pred EECCCCCCCccCCCCCC---------CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-CCCccc
Confidence 99999999999876544 4689888999999999 7788999999999998 778753 126787
Q ss_pred CCC-CCCCeEecCCCCcceeecCCCcccCCCCc
Q psy6570 597 NYC-DNAGLCSYSKQGKPVCTCVNGWSGITCSE 628 (713)
Q Consensus 597 ~~C-~~~g~C~~~~~g~~~C~C~~G~~G~~C~~ 628 (713)
.+| .++++|++.. ++|+|.|++||+|..|+.
T Consensus 144 ~~C~~~~~~C~n~~-g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 144 LXCNTDNEVCXNVE-GVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp CCCCTTTEEEEEET-TEEEEEECTTCEEETTTT
T ss_pred ccccccCcceecCC-CCeeeECCCCCccCcccc
Confidence 799 8899999876 899999999999988765
No 33
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.72 E-value=2.4e-16 Score=170.55 Aligned_cols=186 Identities=14% Similarity=0.119 Sum_probs=137.9
Q ss_pred CCcccCCceeEEEcc-CcccEEecCCCCCceEEEeccCCeEEEeecCCCC-CCeEEEEecCCceEE-EEEcCCCCCcceE
Q psy6570 1 MASISSGNVTRVKRE-MNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRS-SNNIMVSTLEGRKKR-TLLNTGLNEPYDI 77 (713)
Q Consensus 1 vad~~~~~I~~~~~~-~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~-~~~I~~~~~~G~~~~-~l~~~~~~~p~~i 77 (713)
|+|.. ++|+++++. +...++...+..|.+|++|+.++ |||+|..... ...|.+++.++.... ..+ ..+..|.+|
T Consensus 157 v~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~-~~~~~P~gi 233 (433)
T 4hw6_A 157 WVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL-CNARGAKTC 233 (433)
T ss_dssp EECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE-EECSSBCCC
T ss_pred EEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc-cccCCCCEE
Confidence 34555 899999985 45566677888999999998766 9999973211 234666666654431 222 247899999
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecC-CCCcEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-----e
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASID-GKNKFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-----R 150 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~d-G~~~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-----~ 150 (713)
++|+.+++|||+|+..+ +|++++++ |...+.++. ....++.+|+||+..++|||+|..+++|+++++++.. .
T Consensus 234 avd~~~G~lyv~d~~~~-~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~ 312 (433)
T 4hw6_A 234 AVHPQNGKIYYTRYHHA-MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP 312 (433)
T ss_dssp EECTTTCCEEECBTTCS-EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC
T ss_pred EEeCCCCeEEEEECCCC-EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE
Confidence 99998999999999877 99999998 544244443 3345677899999888899999999999999988532 2
Q ss_pred eEEEec-C-----------CCCccceeeee---------e-CCeEEEEeCCCCcEEEEcccC
Q psy6570 151 FVVYHT-E-----------DNGYKPYKLEV---------F-EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 151 ~~~~~~-~-----------~~~~~p~~i~~---------~-~~~ly~td~~~~~i~~~~~~~ 190 (713)
.++... . ..+..|.+|++ + ++.|||+|+.+++|+++++.+
T Consensus 313 ~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G 374 (433)
T 4hw6_A 313 YIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG 374 (433)
T ss_dssp EEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS
T ss_pred EEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC
Confidence 233321 1 13667999998 5 678999999999999998744
No 34
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.71 E-value=1.2e-17 Score=186.32 Aligned_cols=124 Identities=28% Similarity=0.703 Sum_probs=102.2
Q ss_pred CCCCCcEEcCCCCCeeccCC----CCCCCCCCcccCCCCCCCCCCCCCCC---CCCCCCcEEeecCCCceeeCCCCCcCC
Q psy6570 512 TCLNGGTCIPNSKNNVCKCP----SQYTGRRCECAVGDTSCASLANKCTP---NYCSNNGTCVLIEGKPSCKCLPPYSGK 584 (713)
Q Consensus 512 ~C~~~g~C~~~~~~~~C~C~----~g~~G~~C~~~~~~~~c~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~G~ 584 (713)
+|.++|+|++ ++|.|+ +||+|..|+.+ .+.|.. .+|.++|+|.+ ++|.|++||+|.
T Consensus 494 ~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~~---------~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~ 556 (690)
T 3fcs_B 494 VCSQRGECLC----GQCVCHSSDFGKITGKYCECD---------DFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGY 556 (690)
T ss_dssp GGGGSEEECS----SSEEECCCSSCCCBSTTSCBC---------SSCCCBSSSSBGGGSEEEET----TEEEECTTEESS
T ss_pred CCCCCCEEEC----CeeEeecCCCCCeeCCCcCcc---------cCcCcCCCCCCCCCCCEecC----CeeECcCCCcCC
Confidence 5888999983 699999 99999999865 346664 47999999985 789999999999
Q ss_pred CCCcCCCCCCCC----CCCCCCCeEecCCCCcceeec-CCCcccCCCCcCCCCCCCCCCCCeecCCCCccCCCCCceeeC
Q psy6570 585 QCTEREDSPSCH----NYCDNAGLCSYSKQGKPVCTC-VNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICIC 659 (713)
Q Consensus 585 ~C~~~~~~~~C~----~~C~~~g~C~~~~~g~~~C~C-~~G~~G~~C~~~~~C~~~C~~~~~C~~~~~~~~~~~~~~C~C 659 (713)
.|+...+.+.|. .+|.++|+|.+. .|.| ++||+|..|+....|..+|.++++|+. |
T Consensus 557 ~CeC~~~~~~C~~~~g~~C~~~G~C~~g-----~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~--------------C 617 (690)
T 3fcs_B 557 YCNCTTRTDTCMSSNGLLCSGRGKCECG-----SCVCIQPGSYGDTCEKCPTCPDACTFKKECVE--------------C 617 (690)
T ss_dssp SSCEECCCTTTBCTTSSBTSSSCEEETT-----EEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT--------------T
T ss_pred CCccCCCCCcccCCCCCCCCCCCEEeCC-----EEECCCCCccCCCcCcCCCCCCCCCCCCCccc--------------C
Confidence 998322346784 579999999752 6999 999999999975668888999999976 8
Q ss_pred CCCcccCCCCcc
Q psy6570 660 PRGYAGVRCQTL 671 (713)
Q Consensus 660 ~~Gy~G~~C~~~ 671 (713)
..||+|..|+..
T Consensus 618 ~~g~tG~~C~~~ 629 (690)
T 3fcs_B 618 KKFDRGALHDEN 629 (690)
T ss_dssp TTTCCSSSSSSS
T ss_pred CCCCccCCCCcc
Confidence 999999976554
No 35
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.68 E-value=8.3e-17 Score=146.00 Aligned_cols=114 Identities=32% Similarity=0.729 Sum_probs=92.3
Q ss_pred CCCCCCCCCCCcEEeecC--CCceeeCCCCCcCCCCCcCC----------CCCCC-CCCCCCCCeEe-------cCCCCc
Q psy6570 553 NKCTPNYCSNNGTCVLIE--GKPSCKCLPPYSGKQCTERE----------DSPSC-HNYCDNAGLCS-------YSKQGK 612 (713)
Q Consensus 553 ~~C~~~~C~~~~~C~~~~--g~~~C~C~~G~~G~~C~~~~----------~~~~C-~~~C~~~g~C~-------~~~~g~ 612 (713)
++|.+++|.++++|++.. ++|+|.|++||+|..|+... +.++| ..+|.++++|+ +.. ++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~-~~ 79 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTF-IG 79 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEE-CC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCC-CC
Confidence 368888999999999875 68999999999999998632 23667 56799999998 333 78
Q ss_pred ceeecCCCcccCCCC-cCCCCC-CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCcccc
Q psy6570 613 PVCTCVNGWSGITCS-ERVSCA-HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLVH 673 (713)
Q Consensus 613 ~~C~C~~G~~G~~C~-~~~~C~-~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~~ 673 (713)
|+|.|++||+|..|+ ++++|. ++|.++++|++ ..++|+|.|++||+|++|+....
T Consensus 80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~------~~g~~~C~C~~G~~G~~c~~~~~ 136 (143)
T 4d90_A 80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTD------LVANYSCECPGEFMGRNCQYKGG 136 (143)
T ss_dssp EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEE------ETTEEEEECCTTCBSTTSCBC--
T ss_pred eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeEC------CCCCeEeECCCCCccCCceecCC
Confidence 999999999999998 888897 78999999987 34569999999999999987654
No 36
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=9.4e-16 Score=165.91 Aligned_cols=177 Identities=14% Similarity=0.202 Sum_probs=135.7
Q ss_pred eeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC-CCCCcceEEEcCCCCc
Q psy6570 9 VTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT-GLNEPYDIALEPLSGR 85 (713)
Q Consensus 9 I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~-~~~~p~~iavD~~~~~ 85 (713)
+..++.++... ..+..+..|.+|++|+.+++|||+|. ..++|+++++++.....+... ....|++|++||..++
T Consensus 207 v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 207 NYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSW---NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNY 283 (430)
T ss_dssp EEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEET---TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSE
T ss_pred EEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEEC---CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCE
Confidence 44456555433 23446889999999998899999999 789999999998776444433 3467999999997777
Q ss_pred EEEEccCCCCeEEEEecCCCC-----cEEEEeC--------------CCCCCe-eEEEeC-------CCCeEEEEcCCCC
Q psy6570 86 MFWTELGIKPRISGASIDGKN-----KFNLVDN--------------NIQWPT-GITIDY-------PSQRLYWADPKAR 138 (713)
Q Consensus 86 ly~td~~~~~~I~~~~~dG~~-----~~~l~~~--------------~~~~p~-glavd~-------~~~~LY~~d~~~~ 138 (713)
|||+|...+ +|++++.++.. ..+++.. .+..|. +++++. .++.|||+|..++
T Consensus 284 lyv~d~~~~-~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~ 362 (430)
T 3tc9_A 284 AYIVVVNQH-YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH 362 (430)
T ss_dssp EEEEETTTT-EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT
T ss_pred EEEEECCCC-EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc
Confidence 999999888 99999999753 2334332 267898 899963 4679999999999
Q ss_pred cEEEEeCCCCceeEEEec--------------CCCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 139 TIESINLNGKDRFVVYHT--------------EDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 139 ~I~~~~~~g~~~~~~~~~--------------~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+|++++.+|...++.... ..++..|.+|+++ +++||++|..+++|+++++.
T Consensus 363 ~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 363 CIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 999999888544443321 0125689999998 47999999999999998753
No 37
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.67 E-value=2e-15 Score=163.24 Aligned_cols=163 Identities=13% Similarity=0.149 Sum_probs=127.6
Q ss_pred ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEEcC-CCCCcceEEEcCCCCcEEEEccCCCCeEEE
Q psy6570 22 LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLLNT-GLNEPYDIALEPLSGRMFWTELGIKPRISG 99 (713)
Q Consensus 22 ~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~~~-~~~~p~~iavD~~~~~ly~td~~~~~~I~~ 99 (713)
+..+..|.+|++|+..++|||+|. ..++|++++++ |...+.+... ....+.+|++||..++|||+|...+ +|++
T Consensus 224 ~~~~~~P~giavd~~~G~lyv~d~---~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~-~I~~ 299 (433)
T 4hw6_A 224 LCNARGAKTCAVHPQNGKIYYTRY---HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH-CIYR 299 (433)
T ss_dssp EEECSSBCCCEECTTTCCEEECBT---TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT-EEEE
T ss_pred ccccCCCCEEEEeCCCCeEEEEEC---CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC-EEEE
Confidence 446889999999998899999999 78899999998 6553444433 3345678999998778999999888 9999
Q ss_pred EecCCCC-----cEEEEeC--------------CCCCCeeEEE---------eCCCCeEEEEcCCCCcEEEEeCCCCcee
Q psy6570 100 ASIDGKN-----KFNLVDN--------------NIQWPTGITI---------DYPSQRLYWADPKARTIESINLNGKDRF 151 (713)
Q Consensus 100 ~~~dG~~-----~~~l~~~--------------~~~~p~glav---------d~~~~~LY~~d~~~~~I~~~~~~g~~~~ 151 (713)
+++|+.. ..+++.. .+..|.+|++ | .++.|||+|+.+++|++++.+|...+
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~G~v~t 378 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPEGRVTT 378 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTTSEEEE
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCCCCEEE
Confidence 9988532 2344432 3678999999 5 68899999999999999999884443
Q ss_pred EEEecC--------------CCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 152 VVYHTE--------------DNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 152 ~~~~~~--------------~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+..... ..+.+|.+|+++ ++.|||+|+.+++|+++.+.
T Consensus 379 ~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 379 YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 332211 136779999998 78999999999999998753
No 38
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=3.5e-15 Score=160.59 Aligned_cols=184 Identities=13% Similarity=0.114 Sum_probs=140.2
Q ss_pred CCcccCCceeEEEccCc-ccEEecCCCCCceEEEeccCCeEEEeecCCCCCC-eEEEEecCCceEEEEE----cCCCCCc
Q psy6570 1 MASISSGNVTRVKREMN-LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSN-NIMVSTLEGRKKRTLL----NTGLNEP 74 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~-~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~-~I~~~~~~G~~~~~l~----~~~~~~p 74 (713)
|+|..+++|+++++++. ..++......|. |++++.++.|||++. ..+ +|++++.++......+ ......|
T Consensus 146 v~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~---~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p 221 (409)
T 3hrp_A 146 AYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGW---EGTHTVYVYMKASGWAPTRIGQLGSTFSGKI 221 (409)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBS---STTCEEEEEEGGGTTCEEEEEECCTTSCSCC
T ss_pred EEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEec---CCCceEEEEEcCCCceeEEeeeccchhcCCc
Confidence 35667789999999864 455566677788 999999999999998 343 8999998876543222 2246889
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEe----CC-CCCCe-eEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVD----NN-IQWPT-GITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~----~~-~~~p~-glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
++|++||.+++|||++. .. +|+++++++.....+.. .. ...|. +|++|+.+++|||+|...++|++++++|.
T Consensus 222 ~~iav~p~~g~lyv~d~-~~-~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 222 GAVALDETEEWLYFVDS-NK-NFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp CBCEECTTSSEEEEECT-TC-EEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred EEEEEeCCCCeEEEEEC-CC-cEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 99999998999999875 34 89999998776555421 11 12356 99999888999999999999999999997
Q ss_pred ceeEEEecC------------CCCccceeeeee-CCeEEEEeC-CCCcEEEEcccCC
Q psy6570 149 DRFVVYHTE------------DNGYKPYKLEVF-EDNLYFSTY-RTNNILKINKFGN 191 (713)
Q Consensus 149 ~~~~~~~~~------------~~~~~p~~i~~~-~~~ly~td~-~~~~i~~~~~~~~ 191 (713)
.. .+.... ..+..|.+|+++ +++|||+|+ .+++|++++...+
T Consensus 300 ~~-~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 300 CE-WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EE-EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EE-EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 33 333221 125679999998 567999999 9999999985433
No 39
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.3e-15 Score=162.34 Aligned_cols=181 Identities=13% Similarity=0.209 Sum_probs=136.6
Q ss_pred ceeEEEccC--ccc-----EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC--------Cce----------
Q psy6570 8 NVTRVKREM--NLK-----TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE--------GRK---------- 62 (713)
Q Consensus 8 ~I~~~~~~~--~~~-----~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~--------G~~---------- 62 (713)
+|+.+++.. ... ..+..+.+|.+|++|+.+++||+++. ..++|++++++ +..
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~---~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY---EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET---TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred eEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC---CCCEEEEEecccccccccCceeeccccccccc
Confidence 366665443 322 23446789999999999999999999 78899999997 332
Q ss_pred -EEEEEc-CCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc-----EEEEeC--------------CCCCCe-e
Q psy6570 63 -KRTLLN-TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK-----FNLVDN--------------NIQWPT-G 120 (713)
Q Consensus 63 -~~~l~~-~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~-----~~l~~~--------------~~~~p~-g 120 (713)
.+.++. .....|.+|++||..+.||++|+.++ +|+++++|+... .+++.. .|..|. +
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h-~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH-YFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT-EEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC-EEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 223332 33467999999997777999999989 999999998653 344432 467899 8
Q ss_pred EEEeC------CCCeEEEEcCCCCcEEEEeCCCCceeEEEecC--------------------CCCccceeeeeeC--Ce
Q psy6570 121 ITIDY------PSQRLYWADPKARTIESINLNGKDRFVVYHTE--------------------DNGYKPYKLEVFE--DN 172 (713)
Q Consensus 121 lavd~------~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~--------------------~~~~~p~~i~~~~--~~ 172 (713)
+++|. .++.||++|+.+++|++++.+|.-.++..... .++.+|.+|+++. +.
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 88873 56899999999999999999885443332210 1367899999984 79
Q ss_pred EEEEeCCCCcEEEEcccCCC
Q psy6570 173 LYFSTYRTNNILKINKFGNS 192 (713)
Q Consensus 173 ly~td~~~~~i~~~~~~~~~ 192 (713)
||++|..+++|+++.+.+..
T Consensus 458 lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCc
Confidence 99999999999999876543
No 40
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=144.58 Aligned_cols=118 Identities=32% Similarity=0.747 Sum_probs=96.0
Q ss_pred CCCCCCCCCCcEEcCCC--CCeeccCCCCCCCCCCcccCC----CCCCCCCCCCCCCCCCCCCcEEe-------ecCCCc
Q psy6570 507 KCDTCTCLNGGTCIPNS--KNNVCKCPSQYTGRRCECAVG----DTSCASLANKCTPNYCSNNGTCV-------LIEGKP 573 (713)
Q Consensus 507 ~C~~~~C~~~g~C~~~~--~~~~C~C~~g~~G~~C~~~~~----~~~c~~~~~~C~~~~C~~~~~C~-------~~~g~~ 573 (713)
.|...||.++++|++.. ++|+|.|++||+|..|+.... ...| ...++|..++|.++++|+ ++.++|
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c-~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~ 80 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEP-TSAGPCTPNPCHNGGTCEISEAYRGDTFIGY 80 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSC-CCCCTTSSCCCCTTCEEEECCCEETTEECCE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCcccccccccc-ccCCcCCCCCCCCCCEecCCCccccCCCCCe
Confidence 57778999999999865 579999999999999974311 1111 125789889999999999 667899
Q ss_pred eeeCCCCCcCCCCC-cCCCCCCC-CCCCCCCCeEecCCCCcceeecCCCcccCCCCcC
Q psy6570 574 SCKCLPPYSGKQCT-EREDSPSC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSER 629 (713)
Q Consensus 574 ~C~C~~G~~G~~C~-~~~~~~~C-~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~~~ 629 (713)
+|.|++||+|..|+ ++ ++| ..+|.++++|++.. ++|+|.|++||+|+.|+..
T Consensus 81 ~C~C~~G~~G~~C~~~i---~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 81 VCKCPRGFNGIHCQHNI---NECEVEPCKNGGICTDLV-ANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp EEECCTTEESTTSCEEC---CTTTTCCSCTTCEEEEET-TEEEEECCTTCBSTTSCBC
T ss_pred EeECcCCCcCCCcccCC---CcCCCCCCCCCCEeECCC-CCeEeECCCCCccCCceec
Confidence 99999999999998 54 788 67899999999876 8999999999999999863
No 41
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=7e-15 Score=158.22 Aligned_cols=173 Identities=16% Similarity=0.179 Sum_probs=133.0
Q ss_pred ceeEEEccCcccE-Ee----c-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEE----EcCC-CCCcc-
Q psy6570 8 NVTRVKREMNLKT-VL----S-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL----LNTG-LNEPY- 75 (713)
Q Consensus 8 ~I~~~~~~~~~~~-~~----~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l----~~~~-~~~p~- 75 (713)
+|+++++.+.... .+ . ....|.+|++|+.++.|||++. .++|+++++++....++ .... ...|.
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT----TCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 7888888765431 22 3 6788999999998899999875 57999999987765554 2111 12366
Q ss_pred eEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC--------------CCCCeeEEEeCCCCeEEEEcC-CCCcE
Q psy6570 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNN--------------IQWPTGITIDYPSQRLYWADP-KARTI 140 (713)
Q Consensus 76 ~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~--------------~~~p~glavd~~~~~LY~~d~-~~~~I 140 (713)
+|++||.+++|||+|...+ +|++++++|. ..+++... +..|.+|++|+. ++|||+|. .+++|
T Consensus 271 ~ia~~p~~g~lyv~d~~~~-~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I 347 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLS-SVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCL 347 (409)
T ss_dssp EEEEETTTTEEEEEETTTT-EEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEE
T ss_pred cEEEeCCCCEEEEEeCCCC-EEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEE
Confidence 9999998899999999888 9999999987 44444433 678999999965 56999999 99999
Q ss_pred EEEe-CCCCceeEEEec-C-----------CCCccceeeeeeC-CeEEEEeCCCCcEEEEcc
Q psy6570 141 ESIN-LNGKDRFVVYHT-E-----------DNGYKPYKLEVFE-DNLYFSTYRTNNILKINK 188 (713)
Q Consensus 141 ~~~~-~~g~~~~~~~~~-~-----------~~~~~p~~i~~~~-~~ly~td~~~~~i~~~~~ 188 (713)
++++ .+|. ...+... . ..+..|.+|+++. +.||++|+.+++|+++.+
T Consensus 348 ~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9999 4554 4444332 0 1256899999984 899999999999999864
No 42
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.2e-14 Score=151.98 Aligned_cols=199 Identities=16% Similarity=0.198 Sum_probs=142.8
Q ss_pred CceeEEEccC-cccEEe--cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc--eEEEEE--------cCCCCC
Q psy6570 7 GNVTRVKREM-NLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR--KKRTLL--------NTGLNE 73 (713)
Q Consensus 7 ~~I~~~~~~~-~~~~~~--~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~--~~~~l~--------~~~~~~ 73 (713)
++|++++.++ ...... ..+..|.+|++|+. ++||++|. ..++|.+++++|+ ....+. ...+..
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~-g~l~v~d~---~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD-GNYWVTDV---ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTT-SCEEEEET---TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCC-CCEEEEEC---CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC
Confidence 5788888864 322222 34678999999965 66999999 7899999999997 444443 234678
Q ss_pred cceEEEcCCCCcEEEEcc-CCCCeEEEEecCCCCcEEEEe---------CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEE
Q psy6570 74 PYDIALEPLSGRMFWTEL-GIKPRISGASIDGKNKFNLVD---------NNIQWPTGITIDYPSQRLYWADPKARTIESI 143 (713)
Q Consensus 74 p~~iavD~~~~~ly~td~-~~~~~I~~~~~dG~~~~~l~~---------~~~~~p~glavd~~~~~LY~~d~~~~~I~~~ 143 (713)
|.+|++|+.++.||++|. ..+ +|.+++.+|.....+.. ..+..|.+|++|+.+++|||+|...++|.++
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~-~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNS-RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCC-EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCC-eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 999999987899999996 566 99999999987666542 2356799999998889999999999999999
Q ss_pred eCC-CCceeEEEecCCCCccceeeeee-------CCeEEEEeCCCCcEEEEcccCCCcceeee---ccccccccEEEEe
Q psy6570 144 NLN-GKDRFVVYHTEDNGYKPYKLEVF-------EDNLYFSTYRTNNILKINKFGNSDFNVLA---NNLNRASDVLILQ 211 (713)
Q Consensus 144 ~~~-g~~~~~~~~~~~~~~~p~~i~~~-------~~~ly~td~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~i~v~~ 211 (713)
+++ |.....+..... ...|.++++. ++.+|+++....+|+.++...+.....+. ..+..|.+|++..
T Consensus 224 ~~~~G~~~~~~~~~~~-~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 224 KTDTKEFVREIKHASF-GRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp ETTTCCEEEEECCTTT-TTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred ECCCCcEEEEEecccc-CCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 998 766555532211 2334444333 44566666777788888866565554442 3455566666543
No 43
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.64 E-value=4.1e-15 Score=160.81 Aligned_cols=294 Identities=15% Similarity=0.195 Sum_probs=137.7
Q ss_pred CCCceEEEecc---CCeEEEeecCCCC---------CCeEEEEecCCc--------eEEEEEc----CCCCCcceEEEcC
Q psy6570 26 HDPRGVAVDWV---GKNLYWTDAGGRS---------SNNIMVSTLEGR--------KKRTLLN----TGLNEPYDIALEP 81 (713)
Q Consensus 26 ~~p~gla~D~~---~~~ly~td~~~~~---------~~~I~~~~~~G~--------~~~~l~~----~~~~~p~~iavD~ 81 (713)
..+.|||+++. ++.||++...... ..+|.++.++.. ..++|+. ........|+++|
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp 148 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP 148 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC
Confidence 45678999974 6789998652111 147888887521 1234432 1234566799997
Q ss_pred CCCcEEEEc--cC--------------CCCeEEEEecCCCC-------------------cEEEEeCCCCCCeeEEEeCC
Q psy6570 82 LSGRMFWTE--LG--------------IKPRISGASIDGKN-------------------KFNLVDNNIQWPTGITIDYP 126 (713)
Q Consensus 82 ~~~~ly~td--~~--------------~~~~I~~~~~dG~~-------------------~~~l~~~~~~~p~glavd~~ 126 (713)
+|+||++- .+ ..++|+|++.||+. +..+....++.|.+|++|+.
T Consensus 149 -DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 149 -DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp -TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred -CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 78999983 11 13589999999941 23466668999999999987
Q ss_pred CC------eEEEEcC-C----CCcEEEEeCCCCc---eeEEEecCC-CCccceeeeeeCC--------eEEEEeCCCCcE
Q psy6570 127 SQ------RLYWADP-K----ARTIESINLNGKD---RFVVYHTED-NGYKPYKLEVFED--------NLYFSTYRTNNI 183 (713)
Q Consensus 127 ~~------~LY~~d~-~----~~~I~~~~~~g~~---~~~~~~~~~-~~~~p~~i~~~~~--------~ly~td~~~~~i 183 (713)
++ +||.+|. . ..+|..+.. |.+ ...+..... ....|.|+.++.+ .+|++++. ++|
T Consensus 228 tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i 305 (463)
T 2wg3_C 228 PTDININLTILCSDSNGKNRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNF 305 (463)
T ss_dssp CSSTTCSEEEEEECC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCE
T ss_pred CCCcccceEEEecccCCCCCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcE
Confidence 54 7888885 2 123544422 221 111111111 1146778887533 47888886 678
Q ss_pred EEEcccCCCcc---eeeecc---------ccccccEEEEeeccccCCccCCCCCCCCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 184 LKINKFGNSDF---NVLANN---------LNRASDVLILQENKQAHNVTNHCDDKPCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 184 ~~~~~~~~~~~---~~~~~~---------~~~~~~i~v~~~~~q~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
+++........ ..+... ..++.++.+... +++=+.....-. +....|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pd------------------G~Lyv~~~~~~~---~~~~~G 364 (463)
T 2wg3_C 306 LTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDEL------------------GEVYILSSSKSM---TQTHNG 364 (463)
T ss_dssp EEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTT------------------CCEEEEEESSCG---GGCSSE
T ss_pred EEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCC------------------CCEEEEeccCCc---ccCCCC
Confidence 88865433211 111000 011111111100 111111000000 000000
Q ss_pred ccccCCCCCcccCCCCCCCCCccCCCCCCCCCCcccCCCCCCCccccCCCCccCCCCCCCCCCCCCCCeeecCCCCCCee
Q psy6570 252 ELNVTSGKMSCKVAPARTCYLDCNHGNLPSSHTCLCPDHLTEELNVTSGKMSCKVAPARTCYLDCNHGTCEFDDDFDPHC 331 (713)
Q Consensus 252 ~~~~~~~~c~C~~~~~~~~~~~~~~~~~~~~~~c~C~~~~~~~~c~C~~g~~~~~~~~~~C~~~C~~~~C~~~~~~~~~C 331 (713)
. + |.... +. -....+.|..+|.+..|..++|..+|.||+|... +.|
T Consensus 365 ~------I------~Ri~~---------p~---------~~~~p~~C~~~~~g~~c~~~~C~~~C~nG~C~~~----~~C 410 (463)
T 2wg3_C 365 K------L------YKIVD---------PK---------RPLMPEECRATVQPAQTLTSECSRLCRNGYCTPT----GKC 410 (463)
T ss_dssp E------E------EEEEC---------TT---------SCSSCGGGCCCCCCCCCCCCHHHHHCCSEEECTT----SCE
T ss_pred c------E------EEecC---------cc---------cccccccCCCCCcCCCCccccccCCCCCCccCCC----CeE
Confidence 0 0 00000 00 0011245666777777777778666887888743 478
Q ss_pred ecCCCcccCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCcc
Q psy6570 332 ICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESR 385 (713)
Q Consensus 332 ~C~~g~~G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~ 385 (713)
.|++||+|..|+...|.. +|.+++.|+.. ++|.|++||+|..|+..
T Consensus 411 ~C~~G~~G~~C~~~~C~~-~C~~~g~C~~~-------~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 411 CCSPGWEGDFCRTAKCEP-ACRHGGVCVRP-------NKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp EECTTEESTTSCEECC--------------------------------------
T ss_pred CCCCCcCCCcCCcCcCCC-CCCCCCEECCC-------CEEECCCCcccCCCCCC
Confidence 888888888887767766 78888888653 46888888888887754
No 44
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.4e-14 Score=156.22 Aligned_cols=184 Identities=11% Similarity=0.143 Sum_probs=134.3
Q ss_pred ccCCceeEEEccCcc-cEEec----CCCCCceEEE-------eccCCeEEEeecCCC---CCCeEEEEecC--CceE---
Q psy6570 4 ISSGNVTRVKREMNL-KTVLS----NLHDPRGVAV-------DWVGKNLYWTDAGGR---SSNNIMVSTLE--GRKK--- 63 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~-~~~~~----~~~~p~gla~-------D~~~~~ly~td~~~~---~~~~I~~~~~~--G~~~--- 63 (713)
...++|+++++.+.. .+++. .+..|.+|++ |..+++||++|.... ....|++++.+ |...
T Consensus 159 ~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~ 238 (496)
T 3kya_A 159 DGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRS 238 (496)
T ss_dssp ETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTS
T ss_pred CCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecc
Confidence 345678899988743 44332 3457999999 988888999998320 12347777543 3443
Q ss_pred --EEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC-------CCCc------------EEEEe-CCCCCCeeE
Q psy6570 64 --RTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASID-------GKNK------------FNLVD-NNIQWPTGI 121 (713)
Q Consensus 64 --~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d-------G~~~------------~~l~~-~~~~~p~gl 121 (713)
..+. .+.+|.+|++||.+++||++++... +|++++++ +... +.++. ....+|.+|
T Consensus 239 ~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g-~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~i 315 (496)
T 3kya_A 239 DIQLIA--AYKQCNGATIHPINGELYFNSYEKG-QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQI 315 (496)
T ss_dssp CEEEEE--EESCCCCEEECTTTCCEEEEETTTT-EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEE
T ss_pred cceeec--cCCCceEEEEcCCCCeEEEEECCCC-EEEEEecccccccccCceeecccccccccccceeEecCCCCCceEE
Confidence 2332 3579999999999999999999877 99999997 3322 23333 345689999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEeCCCCce-----eEEEec------------CCCCccce-eeeee--------CCeEEE
Q psy6570 122 TIDYPSQRLYWADPKARTIESINLNGKDR-----FVVYHT------------EDNGYKPY-KLEVF--------EDNLYF 175 (713)
Q Consensus 122 avd~~~~~LY~~d~~~~~I~~~~~~g~~~-----~~~~~~------------~~~~~~p~-~i~~~--------~~~ly~ 175 (713)
+||+..+.||++|..+++|+++++++... .++... ..++..|. ++.++ ++.||+
T Consensus 316 a~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV 395 (496)
T 3kya_A 316 FIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF 395 (496)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE
T ss_pred EEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE
Confidence 99998888999999999999999988542 334332 11456798 77775 568999
Q ss_pred EeCCCCcEEEEcccC
Q psy6570 176 STYRTNNILKINKFG 190 (713)
Q Consensus 176 td~~~~~i~~~~~~~ 190 (713)
+|+.+++|+++++.+
T Consensus 396 aD~~N~rIr~i~~~G 410 (496)
T 3kya_A 396 VDRLNFCVRKVTPEG 410 (496)
T ss_dssp EEGGGTEEEEECTTC
T ss_pred EECCCCEEEEEeCCC
Confidence 999999999998654
No 45
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=1.9e-14 Score=145.32 Aligned_cols=199 Identities=22% Similarity=0.317 Sum_probs=141.3
Q ss_pred CcccCCceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEE
Q psy6570 2 ASISSGNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL 79 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iav 79 (713)
++...+.|.+++.++..... ...+..|.+|++|+. ++|||++. .+.|.++++++.....+....+..|.+|++
T Consensus 41 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~----~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~ 115 (270)
T 1rwi_B 41 SEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF----NNRVVTLAAGSNNQTVLPFDGLNYPEGLAV 115 (270)
T ss_dssp ECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET----TTEEEEECTTCSCCEECCCCSCSSEEEEEE
T ss_pred ccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC----CCEEEEEeCCCceEeeeecCCcCCCcceEE
Confidence 45567788888877644333 345678999999975 66999986 468999999997765554445678999999
Q ss_pred cCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 80 D~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
|+ ++.||+++.... +|.+++.............+..|.+|++|+ +++||+++...++|++++.++......... .
T Consensus 116 ~~-~g~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~ 190 (270)
T 1rwi_B 116 DT-QGAVYVADRGNN-RVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFT--D 190 (270)
T ss_dssp CT-TCCEEEEEGGGT-EEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCS--S
T ss_pred CC-CCCEEEEECCCC-EEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeeccc--C
Confidence 97 678999997766 899986544333332334567899999996 557999999889999999988765433222 2
Q ss_pred CccceeeeeeC-CeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEE
Q psy6570 160 GYKPYKLEVFE-DNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210 (713)
Q Consensus 160 ~~~p~~i~~~~-~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~ 210 (713)
+..|.+|+++. ++||+++...++|.+++..+..........+..|.+|.+.
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~ 242 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVD 242 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEEC
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEEC
Confidence 46789999984 5999999999999999986543333222334455666544
No 46
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.60 E-value=2.8e-15 Score=167.31 Aligned_cols=159 Identities=26% Similarity=0.603 Sum_probs=115.2
Q ss_pred CCCCCCcccCCCCCCCc---cccCCCCccCCCCC----------CCCC-----CCCCCC-eeecCCCCCCeeecC----C
Q psy6570 279 LPSSHTCLCPDHLTEEL---NVTSGKMSCKVAPA----------RTCY-----LDCNHG-TCEFDDDFDPHCICQ----E 335 (713)
Q Consensus 279 ~~~~~~c~C~~~~~~~~---c~C~~g~~~~~~~~----------~~C~-----~~C~~~-~C~~~~~~~~~C~C~----~ 335 (713)
.++.....|.++.+.+. |.|.+||.|..|+. ++|. .+|.++ +|.. +.|.|+ +
T Consensus 440 ~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-----g~C~C~~~~~~ 514 (690)
T 3fcs_B 440 QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-----GQCVCHSSDFG 514 (690)
T ss_dssp TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-----SSEEECCCSSC
T ss_pred CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-----CeeEeecCCCC
Confidence 34444445555555555 77777777777753 4573 248755 8872 589999 9
Q ss_pred CcccCCccc--cCCCC---CCCCCCceeeCCCCCCCCCceeeCCCCcccCCCC----ccCCC----CCCCCCCEEEcCCC
Q psy6570 336 NFYGTYCEK--VNNSM---CPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCE----SRICE----NKCHNGGTCIATTQ 402 (713)
Q Consensus 336 g~~G~~C~~--~~c~~---~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~----~~~C~----~~C~~~~~C~~~~~ 402 (713)
||+|..|+. ..|.. .+|.++|.|.. +.|.|++||+|..|+ ...|. .+|.++|+|.. +
T Consensus 515 Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--------g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--g 584 (690)
T 3fcs_B 515 KITGKYCECDDFSCVRYKGEMCSGHGQCSC--------GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--G 584 (690)
T ss_dssp CCBSTTSCBCSSCCCBSSSSBGGGSEEEET--------TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--T
T ss_pred CeeCCCcCcccCcCcCCCCCCCCCCCEecC--------CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--C
Confidence 999999973 33654 47888888865 479999999999998 33475 46888999986 6
Q ss_pred eeeC-CCCCccCCCCcCC--CCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCCCC
Q psy6570 403 TCVC-PPGFTGDTCQQCL--NLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVN 460 (713)
Q Consensus 403 ~C~C-~~g~~g~~C~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~~ 460 (713)
.|.| ++||+|..|+.|. +.+|.+++.|++ |..+|+|..|+.+.|...|.+
T Consensus 585 ~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~--------C~~g~tG~~C~~~~C~~~C~~ 637 (690)
T 3fcs_B 585 SCVCIQPGSYGDTCEKCPTCPDACTFKKECVE--------CKKFDRGALHDENTCNRYCRD 637 (690)
T ss_dssp EEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT--------TTTTCCSSSSSSSCSTTTCCC
T ss_pred EEECCCCCccCCCcCcCCCCCCCCCCCCCccc--------CCCCCccCCCCccccccccCC
Confidence 9999 8999999988643 357888887765 889999998876667655543
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=9.6e-14 Score=141.62 Aligned_cols=183 Identities=17% Similarity=0.254 Sum_probs=140.7
Q ss_pred CcccCCceeEEEccCcccEEec-------CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 2 ASISSGNVTRVKREMNLKTVLS-------NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~~~-------~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
++..+++|.++++++.....+. .+..|.+|+++...++||+++.. ..+.|.+++.+|+....+....+..|
T Consensus 46 ~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~--~~~~i~~~d~~g~~~~~~~~~~~~~~ 123 (286)
T 1q7f_A 46 ADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS--PTHQIQIYNQYGQFVRKFGATILQHP 123 (286)
T ss_dssp EEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG--GGCEEEEECTTSCEEEEECTTTCSCE
T ss_pred EECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC--CCCEEEEECCCCcEEEEecCccCCCc
Confidence 4556778888888765432222 24679999997677999999961 26899999999987766654556789
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEE
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVV 153 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~ 153 (713)
.+|++|+ ++.||+++.... +|.+.+.+|+....+.. ..+..|.+|++|+ +++||+++...++|++++.+|.....+
T Consensus 124 ~~i~~~~-~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~ 200 (286)
T 1q7f_A 124 RGVTVDN-KGRIIVVECKVM-RVIIFDQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYEGQYLRQI 200 (286)
T ss_dssp EEEEECT-TSCEEEEETTTT-EEEEECTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETTCCEEEEE
T ss_pred eEEEEeC-CCCEEEEECCCC-EEEEEcCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECCCCEEEEEcCCCCEEEEE
Confidence 9999997 578999998766 89999998876555543 3567899999996 578999999999999999988755554
Q ss_pred EecCCCCccceeeeee-CCeEEEEeCCCC-cEEEEcccC
Q psy6570 154 YHTEDNGYKPYKLEVF-EDNLYFSTYRTN-NILKINKFG 190 (713)
Q Consensus 154 ~~~~~~~~~p~~i~~~-~~~ly~td~~~~-~i~~~~~~~ 190 (713)
.... .+..|.+|+++ +++||+++...+ +|.+++..+
T Consensus 201 ~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 201 GGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp SCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred ccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 3321 24678999987 568999998876 899998654
No 48
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=7.7e-14 Score=145.71 Aligned_cols=173 Identities=15% Similarity=0.133 Sum_probs=133.3
Q ss_pred ecCCCCCceEEEeccCCeEEEeecCCCC---------------------CCeEEEEecC-CceEEEEEcCCCCCcceEEE
Q psy6570 22 LSNLHDPRGVAVDWVGKNLYWTDAGGRS---------------------SNNIMVSTLE-GRKKRTLLNTGLNEPYDIAL 79 (713)
Q Consensus 22 ~~~~~~p~gla~D~~~~~ly~td~~~~~---------------------~~~I~~~~~~-G~~~~~l~~~~~~~p~~iav 79 (713)
...+..|.+||+|+. ++||+++..... .++|.+++.+ |+..+.+....+..|.+|++
T Consensus 20 ~~~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 20 YLLPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp GCCCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ceecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 346889999999975 789999983210 0369999986 66655544455789999999
Q ss_pred cCCCCcEEEEccCCCCeEEEEecCCC--CcEEEE--------eCCCCCCeeEEEeCCCCeEEEEcC-CCCcEEEEeCCCC
Q psy6570 80 EPLSGRMFWTELGIKPRISGASIDGK--NKFNLV--------DNNIQWPTGITIDYPSQRLYWADP-KARTIESINLNGK 148 (713)
Q Consensus 80 D~~~~~ly~td~~~~~~I~~~~~dG~--~~~~l~--------~~~~~~p~glavd~~~~~LY~~d~-~~~~I~~~~~~g~ 148 (713)
|+ ++.||++|...+ +|.+++++|. ....+. ...+..|.+|++|+.+++||++|. ..++|++++.+|.
T Consensus 99 d~-~g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 99 DT-DGNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp CT-TSCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred CC-CCCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 96 677999998877 9999999998 344443 234678999999987899999997 7999999999998
Q ss_pred ceeEEEecC-------CCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 149 DRFVVYHTE-------DNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 149 ~~~~~~~~~-------~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
....+.... ..+..|.+|+++ +++||++++..++|.+++...+.....+
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 776664332 134569999997 3799999999999999998744444433
No 49
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.58 E-value=2.4e-14 Score=154.79 Aligned_cols=153 Identities=16% Similarity=0.196 Sum_probs=105.1
Q ss_pred ccEEecCCCCCceEEEeccCC-eEEEeecCCCCCCeEEEEecCCceE-EE-E-----EcCC-----CCCcceEEEcCC--
Q psy6570 18 LKTVLSNLHDPRGVAVDWVGK-NLYWTDAGGRSSNNIMVSTLEGRKK-RT-L-----LNTG-----LNEPYDIALEPL-- 82 (713)
Q Consensus 18 ~~~~~~~~~~p~gla~D~~~~-~ly~td~~~~~~~~I~~~~~~G~~~-~~-l-----~~~~-----~~~p~~iavD~~-- 82 (713)
.++++++|..|.+|++.+.+. +|||++. .++|.+++.+|... .. + +..+ ...+.+||++|.
T Consensus 6 v~~va~gL~~P~~~a~~pdG~~rl~V~er----~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~ 81 (463)
T 2wg3_C 6 IQEVVSGLRQPVGALHSGDGSQRLFILEK----EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYK 81 (463)
T ss_dssp EEEEEEEESSEEEEECCSSSSCCEEEEET----TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHH
T ss_pred EEEeccCCCCceEEEECCCCCeEEEEEeC----CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCc
Confidence 466788999999999998764 7999986 58899998877531 11 1 1111 245678999985
Q ss_pred -CCcEEEEccCC-----------CCeEEEEecCCC--------CcEEEEe----CCCCCCeeEEEeCCCCeEEEEc--CC
Q psy6570 83 -SGRMFWTELGI-----------KPRISGASIDGK--------NKFNLVD----NNIQWPTGITIDYPSQRLYWAD--PK 136 (713)
Q Consensus 83 -~~~ly~td~~~-----------~~~I~~~~~dG~--------~~~~l~~----~~~~~p~glavd~~~~~LY~~d--~~ 136 (713)
+++||++-... ..+|.|+.++.. ..++|+. ...+....|+|++ +++||++- ..
T Consensus 82 ~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 82 KNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp HHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred CCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC
Confidence 68899875321 127888877531 2344442 2356678899997 56999983 11
Q ss_pred ---------------CCcEEEEeCCCC--------------------ceeEEEecCCCCccceeeeeeCC--------eE
Q psy6570 137 ---------------ARTIESINLNGK--------------------DRFVVYHTEDNGYKPYKLEVFED--------NL 173 (713)
Q Consensus 137 ---------------~~~I~~~~~~g~--------------------~~~~~~~~~~~~~~p~~i~~~~~--------~l 173 (713)
.++|+|++.||. ..+++.. .+++|.+|+++.. +|
T Consensus 161 ~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~---G~RNp~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 161 ITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAH---GLHDPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp CCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEE---CCSSCCBEEEESSCSSTTCSEEE
T ss_pred CCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEE---CCCCcceEEECCCCCCcccceEE
Confidence 357999999994 1244444 3789999999843 67
Q ss_pred EEEeC
Q psy6570 174 YFSTY 178 (713)
Q Consensus 174 y~td~ 178 (713)
|.+|.
T Consensus 238 ~~~D~ 242 (463)
T 2wg3_C 238 LCSDS 242 (463)
T ss_dssp EEECC
T ss_pred Eeccc
Confidence 77885
No 50
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=2.8e-14 Score=144.12 Aligned_cols=177 Identities=21% Similarity=0.343 Sum_probs=135.8
Q ss_pred CCceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
.++|+++++++..... ...+..|.+|++|+. ++||+++. ..+.|.+++.............+..|.+|++|+ +
T Consensus 86 ~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~ 160 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQ-GAVYVADR---GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-S 160 (270)
T ss_dssp TTEEEEECTTCSCCEECCCCSCSSEEEEEECTT-CCEEEEEG---GGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-T
T ss_pred CCEEEEEeCCCceEeeeecCCcCCCcceEECCC-CCEEEEEC---CCCEEEEEECCCceeEeeccccCCCceeEEEeC-C
Confidence 6778888888755433 245678999999974 67999998 678999997654433333334467899999997 5
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
+.||+++.... +|.++++++..........+..|.+|++|+. ++||+++...++|.+++.++.....+... .+..|
T Consensus 161 g~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~--~~~~p 236 (270)
T 1rwi_B 161 GNVYVTDTDNN-RVVKLEAESNNQVVLPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPFT--GLNTP 236 (270)
T ss_dssp CCEEEEEGGGT-EEEEECTTTCCEEECCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCSCCEECCCC--SCSCE
T ss_pred CCEEEEECCCC-EEEEEecCCCceEeecccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCCcceeeccC--CCCCc
Confidence 67999998766 8999999987655544445688999999965 59999999999999999988765443222 34678
Q ss_pred eeeeee-CCeEEEEeCCCCcEEEEcccCC
Q psy6570 164 YKLEVF-EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 164 ~~i~~~-~~~ly~td~~~~~i~~~~~~~~ 191 (713)
.+|+++ +++||+++...++|.++++...
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 999987 5689999999999999987543
No 51
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.58 E-value=9.6e-16 Score=162.99 Aligned_cols=179 Identities=26% Similarity=0.625 Sum_probs=114.4
Q ss_pred ecCCCCCCeeecCCCcccCCccccCCCCCCCCCCceeeCCCCCC-------CCCceeeCCCCcccCCCCccCCCCCCCCC
Q psy6570 322 EFDDDFDPHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHP-------EPTYKCHCAPSYTGARCESRICENKCHNG 394 (713)
Q Consensus 322 ~~~~~~~~~C~C~~g~~G~~C~~~~c~~~~C~~~~~C~~~~~~~-------~~~~~C~C~~G~~g~~C~~~~C~~~C~~~ 394 (713)
.....+++.|.|+.+|.++.++...- ...+.+.+.+....... ...+.|.|++||.|..|+. .|. +|.++
T Consensus 132 ~~~~nGs~~~~~p~~~~~~~~~~~~~-~~~~~d~g~y~~~~~~g~~~~~~~~~~~~c~C~~g~~G~~C~~-~C~-~C~~~ 208 (423)
T 2gy5_A 132 VIYKNGSFIHSVPRHEVPDILEVHLP-HAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNH-LCT-ACMNN 208 (423)
T ss_dssp EEEETTEEEEEECGGGCCSEEEEEET-TCCGGGCEEEEEEETTCCGGGCEEEEEEECSSCTTEESTTSCE-ECC-CCCTT
T ss_pred EEEcCCeEeeccCccccCCeEEeccC-cCCCCCCCeEeeEECCCcEeccccccccCCcCCCCCCCCCCCC-CCC-CCCCC
Confidence 33457788999999999988875322 22344444443211100 0023466777777777664 342 56677
Q ss_pred CEEEcCCCeeeCCCCCccCCCCcCCCCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCC--CCC-CCeeecCCCCCe
Q psy6570 395 GTCIATTQTCVCPPGFTGDTCQQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKN--YCV-NGECSITDSGPK 471 (713)
Q Consensus 395 ~~C~~~~~~C~C~~g~~g~~C~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~--~~~-~~~C~~~~~~~~ 471 (713)
|+|.+.++.|.|++||+|..|+. .|.++|+|..|.. .|.. .|. ++.|. .+.++
T Consensus 209 G~C~~~~g~C~C~~G~~G~~Ce~---------------------~C~~g~~g~~C~~-~C~~~~~C~~~g~C~--~~~~~ 264 (423)
T 2gy5_A 209 GVCHEDTGECICPPGFMGRTCEK---------------------ACELHTFGRTCKE-RCSGQEGCKSYVFCL--PDPYG 264 (423)
T ss_dssp CEECTTTCCEECCTTEESTTSCE---------------------ECCTTEESTTSCE-ECCSTTTTTTCCEEE--TTTTE
T ss_pred CEEECCCCcEeCCCCccCCCccc---------------------ccCCCCCCCCcCc-cCCCCCCCCCCCEEC--CCCCe
Confidence 77766566777777777776652 1444555555541 3432 243 36674 45679
Q ss_pred ecCCCCccCCCCCCccccCCCCCCcccCCCCccCCCCC-CCCCCCCcEEcCCCCCeeccCCCCCCCCCCccc
Q psy6570 472 CMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCD-TCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 472 C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~-~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~ 542 (713)
|.|.+||+|..|+. .|.+||.|..|+ .++|.++++|.+.. .|.|++||+|..|+..
T Consensus 265 C~C~~G~~G~~C~~------------~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 265 CSCATGWKGLQCNE------------ACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCERE 321 (423)
T ss_dssp EECCBTCBSGGGCB------------CCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred EEeCCCcccccccC------------ccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCccC
Confidence 99999999988875 488889888886 56788888887653 3888888888888743
No 52
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.57 E-value=5.9e-14 Score=143.55 Aligned_cols=175 Identities=12% Similarity=0.213 Sum_probs=132.7
Q ss_pred CCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
...|+++++++..++.+.. -.+.++.+.++.|||++........|++++++|+.++.|..... +++||..+.
T Consensus 87 ~~~Iy~i~~dg~~~~~l~~---~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~ 158 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLDP---DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDRY 158 (302)
T ss_dssp SEEEEEEETTSCCCEEEEC---SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETTE
T ss_pred CCeEEEEeCCCCcceEeec---CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECCE
Confidence 5689999999976544332 22345666789999999211156789999999999888886543 456888999
Q ss_pred EEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCCCccce
Q psy6570 86 MFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDNGYKPY 164 (713)
Q Consensus 86 ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~~~~p~ 164 (713)
|||++.+.. +|++++++|+.+++|+.. +..++++|..++|||+++.. .+|++++++|+.+++|.... + |
T Consensus 159 iy~t~~g~~-~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~--~--~- 228 (302)
T 3s25_A 159 FYYNNPKNG-QLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN--I--E- 228 (302)
T ss_dssp EEEECTTTC-CEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC--E--E-
T ss_pred EEEEeCCCc-eEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC--c--c-
Confidence 999998545 999999999988877642 33456778899999999754 68999999999988876542 2 3
Q ss_pred eeeeeCCeEEEE-eCCCCcEEEEcccCCCcceeee
Q psy6570 165 KLEVFEDNLYFS-TYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 165 ~i~~~~~~ly~t-d~~~~~i~~~~~~~~~~~~~~~ 198 (713)
.+++.+++|||+ +.....|.+++.+|..+..+..
T Consensus 229 ~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~ 263 (302)
T 3s25_A 229 HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAK 263 (302)
T ss_dssp EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEE
T ss_pred eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeC
Confidence 388889999997 5556889999998776655543
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=1e-13 Score=142.53 Aligned_cols=201 Identities=14% Similarity=0.201 Sum_probs=146.1
Q ss_pred CCcccCCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC----CCCCcce
Q psy6570 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT----GLNEPYD 76 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~----~~~~p~~ 76 (713)
++|+..++|+++++++.....+.....|.+|++++.+ +||++.. ..|.++++++...+.+... ....|++
T Consensus 29 ~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG-~l~v~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 29 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSG-GYVATIG-----TKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTS-SEEEEET-----TEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCC-CEEEEEC-----CeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 3577889999999987654444555789999999764 5777653 5899999986655555432 2456899
Q ss_pred EEEcCCCCcEEEEccC----------CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 77 IALEPLSGRMFWTELG----------IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 77 iavD~~~~~ly~td~~----------~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
|++|+ +|+||++++. ....|++++.+|+... +...+..|++|+++++++.|||++...++|++++++
T Consensus 103 i~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 103 GKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE--EeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 99997 6779998743 1237899988865433 334577899999999888999999999999999875
Q ss_pred ---CC--ceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEE
Q psy6570 147 ---GK--DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210 (713)
Q Consensus 147 ---g~--~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~ 210 (713)
|. .++++.........|.+|+++ +++||++.+..++|.++++.++.....+......++.+.+.
T Consensus 180 ~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 180 LQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp TTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 32 233444332223578999997 67999999999999999987666655655555566666664
No 54
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.56 E-value=7.4e-14 Score=145.38 Aligned_cols=180 Identities=16% Similarity=0.228 Sum_probs=132.0
Q ss_pred CcccCCceeEEEccCcc-cEEe--------------------cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC
Q psy6570 2 ASISSGNVTRVKREMNL-KTVL--------------------SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG 60 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~-~~~~--------------------~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G 60 (713)
++..+++|+++++++.. +.+. ..+..|.||++|+..++||++|. . +.|.++++++
T Consensus 35 v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~---~-~~i~~~d~~~ 110 (322)
T 2fp8_A 35 TSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC---Y-YHLSVVGSEG 110 (322)
T ss_dssp EECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET---T-TEEEEECTTC
T ss_pred EEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC---C-CCEEEEeCCC
Confidence 45667889999887643 2221 11357999999976789999997 3 5589999886
Q ss_pred ceEEEEEc----CCCCCcceEEEcCCCCcEEEEccCC----------------CCeEEEEecCCCCcEEEEeCCCCCCee
Q psy6570 61 RKKRTLLN----TGLNEPYDIALEPLSGRMFWTELGI----------------KPRISGASIDGKNKFNLVDNNIQWPTG 120 (713)
Q Consensus 61 ~~~~~l~~----~~~~~p~~iavD~~~~~ly~td~~~----------------~~~I~~~~~dG~~~~~l~~~~~~~p~g 120 (713)
...+++.. ..+..|++|++|+.+|.||++|... ..+|++++.++...+.+. ..+..|+|
T Consensus 111 g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~g 189 (322)
T 2fp8_A 111 GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGG 189 (322)
T ss_dssp EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCE
T ss_pred CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcc
Confidence 55554432 1256799999997578999999652 247899988755444443 35788999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEeCCCC---ceeEEEecCCCCccceeeeee-CCeEEEEeCC----------CCcEEEE
Q psy6570 121 ITIDYPSQRLYWADPKARTIESINLNGK---DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYR----------TNNILKI 186 (713)
Q Consensus 121 lavd~~~~~LY~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~----------~~~i~~~ 186 (713)
|++++++++|||+|...++|+++++++. ..+++... .. |.+|+++ +++||++++. .+.|.++
T Consensus 190 ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~ 265 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKF 265 (322)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEE
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEE
Confidence 9999888889999999999999999873 33444331 22 9999988 5689999876 4678888
Q ss_pred cccC
Q psy6570 187 NKFG 190 (713)
Q Consensus 187 ~~~~ 190 (713)
++.+
T Consensus 266 d~~G 269 (322)
T 2fp8_A 266 DEFG 269 (322)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 8753
No 55
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.52 E-value=1.2e-14 Score=161.46 Aligned_cols=111 Identities=30% Similarity=0.770 Sum_probs=90.5
Q ss_pred CCCCCcEEcCCCCCeeccCC------CCCCCCCCcccCCCCCCCCCCCCCCC---CCCCC--CcEEeecCCCceeeCCCC
Q psy6570 512 TCLNGGTCIPNSKNNVCKCP------SQYTGRRCECAVGDTSCASLANKCTP---NYCSN--NGTCVLIEGKPSCKCLPP 580 (713)
Q Consensus 512 ~C~~~g~C~~~~~~~~C~C~------~g~~G~~C~~~~~~~~c~~~~~~C~~---~~C~~--~~~C~~~~g~~~C~C~~G 580 (713)
+|.++|+|.. ++|.|+ +||.|..|+.+ ...|.. .+|.+ +|+|.. .+|.|++|
T Consensus 483 ~Cs~~G~C~~----G~C~C~~~~~~~~G~~G~~Ce~~---------~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G 545 (687)
T 3k6s_B 483 ICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECD---------TINCERYNGQVCGGPGRGLCFC----GKCRCHPG 545 (687)
T ss_dssp GGGSSEEEET----TEEEECCCCSTTCCEESTTSCEE---------SSCSCEETTEETSHHHHEEEET----TEEEECTT
T ss_pred cCCCCCEEeC----CEEEcCCCCCCCCCccccccccc---------cccccCCCCcCcCCCCCCeEEC----CEEEcCCC
Confidence 5889999983 499999 99999999865 345652 36988 899984 38999999
Q ss_pred CcCCCCCcCCCCCCCCC----CCCCCCeEecCCCCcceeecCCCcccCCCCcCCCCCCCCCCCCeecC
Q psy6570 581 YSGKQCTEREDSPSCHN----YCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCAHFCFNGGTCRE 644 (713)
Q Consensus 581 ~~G~~C~~~~~~~~C~~----~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~~~~~C~~~C~~~~~C~~ 644 (713)
|+|..|+.....+.|.. +|.++|+|.. ++|.|++||+|..|+....|..+|.+++.|+.
T Consensus 546 ~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-----g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~Cv~ 608 (687)
T 3k6s_B 546 FEGSACQCERTTEGCLNPRRVECSGRGRCRC-----NVCECHSGYQLPLCQECPGCPSPCGKYISCAE 608 (687)
T ss_dssp CCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-----SCBCCSTTCCTTTTCCCTTSCCCCTTTHHHHT
T ss_pred CcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-----CEEECCCCCcCCCCCCCCCCCcccCCCCCCCc
Confidence 99999984333467743 6999999975 35999999999999986678889999999975
No 56
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.50 E-value=2.3e-13 Score=140.49 Aligned_cols=200 Identities=12% Similarity=0.024 Sum_probs=138.9
Q ss_pred CCcccCCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEec-CCceEEEEEcCCCCCcceEEE
Q psy6570 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL-EGRKKRTLLNTGLNEPYDIAL 79 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~~~~~~p~~iav 79 (713)
|+|..+++|+++++++....++.....|.+|++|+. ++||+++.+. ...+|++++. +|+...+........|.++++
T Consensus 47 v~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~d-G~l~vad~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~ 124 (306)
T 2p4o_A 47 VTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSN-GDLVATGWNA-DSIPVVSLVKSDGTVETLLTLPDAIFLNGITP 124 (306)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTT-SCEEEEEECT-TSCEEEEEECTTSCEEEEEECTTCSCEEEEEE
T ss_pred EEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCC-CcEEEEeccC-CcceEEEEcCCCCeEEEEEeCCCccccCcccc
Confidence 467778999999998865555555678999999976 5699999721 1235888775 454433332234567889988
Q ss_pred cCCCCcEEEEccCCCCeEEEEecCCCCcEEE-E---------eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC-
Q psy6570 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNL-V---------DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK- 148 (713)
Q Consensus 80 D~~~~~ly~td~~~~~~I~~~~~dG~~~~~l-~---------~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~- 148 (713)
+ ..+++|++|.... +|++++.++...++. . ...+..|+|| ++++++|||+|...++|+++++++.
T Consensus 125 ~-~~~~~~v~d~~~g-~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g 200 (306)
T 2p4o_A 125 L-SDTQYLTADSYRG-AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTD 200 (306)
T ss_dssp S-SSSEEEEEETTTT-EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTS
T ss_pred c-CCCcEEEEECCCC-eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 6 4778999997666 999999875322221 1 1245689999 4457899999999999999999852
Q ss_pred ---ceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCc-ceeeeccccccccEEEE
Q psy6570 149 ---DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSD-FNVLANNLNRASDVLIL 210 (713)
Q Consensus 149 ---~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~i~v~ 210 (713)
.++++.. +..|.+|+++ +++||++++..++|.++++.+... ...+...+..|..+++.
T Consensus 201 ~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 201 KPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp CBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEEC
T ss_pred CCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEe
Confidence 2333332 3578999988 678999999999999999763221 11122344567777664
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.50 E-value=1.3e-12 Score=133.72 Aligned_cols=178 Identities=16% Similarity=0.206 Sum_probs=134.3
Q ss_pred cccCCceeEEEccCcccEEe-c-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEc
Q psy6570 3 SISSGNVTRVKREMNLKTVL-S-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~~~~~-~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD 80 (713)
+...++|.++++++....+. . ....|.+|++|+ .++||+++. ..+.|.+++++|+............|.+|++|
T Consensus 79 ~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~---~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 79 ENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQL---NGDRIGKLTADGTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp ETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECS-TTCEEEEET---TTTEEEEECTTSCEEEEECSSTTCCEEEEEEC
T ss_pred ecCCCeEEEECCCCCeEEecCCCCCCCCccceECC-CCCEEEEcc---CCCeEEEECCCCCEEEccCCCCCCCceeEEEC
Confidence 34457788888875443332 2 357799999996 578999997 67899999999766544444456789999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
+ ++.||+++.... .|++++.+|+.....+...+..|.+|++|+ +++||+++...++|++++.+|........ ...
T Consensus 155 ~-~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~ 229 (300)
T 2qc5_A 155 S-DNALWFTENQNN-SIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEISEYDIP--TPN 229 (300)
T ss_dssp T-TSSEEEEETTTT-EEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECS--STT
T ss_pred C-CCCEEEEecCCC-eEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcEEEEECC--CCC
Confidence 6 567999997766 899999977654432234567899999996 57999999988999999997654433222 235
Q ss_pred ccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 161 YKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 161 ~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
..|.+|+++ +++||+++...+.|.+++..
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 678999987 56899999888999999874
No 58
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=1.4e-12 Score=132.97 Aligned_cols=174 Identities=10% Similarity=0.169 Sum_probs=131.9
Q ss_pred CCceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEc-CCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN-TGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~-~~~~~p~~iavD~~ 82 (713)
++.|.+++.++..... ...+..|.+|++|+. ++||+++. ..++|.+++++|+....+.. ..+..|.+|++|+
T Consensus 99 ~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~---~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~- 173 (286)
T 1q7f_A 99 THQIQIYNQYGQFVRKFGATILQHPRGVTVDNK-GRIIVVEC---KVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND- 173 (286)
T ss_dssp GCEEEEECTTSCEEEEECTTTCSCEEEEEECTT-SCEEEEET---TTTEEEEECTTSCEEEEEECTTTCSSEEEEEECS-
T ss_pred CCEEEEECCCCcEEEEecCccCCCceEEEEeCC-CCEEEEEC---CCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECC-
Confidence 5677777766643222 234568999999975 57999998 67899999999987666543 3467899999997
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeC-CCCCCeeEEEeCCCCeEEEEcCCCC-cEEEEeCCCCceeEEEecCCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDN-NIQWPTGITIDYPSQRLYWADPKAR-TIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-~~~~p~glavd~~~~~LY~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
++.||+++...+ +|.+++.+|.....+... .+..|.+|++|+ +++||+++...+ +|.+++.+|.....+.... ..
T Consensus 174 ~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-~~ 250 (286)
T 1q7f_A 174 KQEIFISDNRAH-CVKVFNYEGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISALESKV-KH 250 (286)
T ss_dssp SSEEEEEEGGGT-EEEEEETTCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEEEEESS-CC
T ss_pred CCCEEEEECCCC-EEEEEcCCCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-CC
Confidence 678999998767 899999988755554332 257899999996 569999998886 9999999987766665432 24
Q ss_pred ccceeeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 161 YKPYKLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 161 ~~p~~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
..|.+|+++ +++||+++. .++|..++.
T Consensus 251 ~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 251 AQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp SCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred CcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 468888887 568999975 677777654
No 59
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=2.2e-12 Score=131.84 Aligned_cols=178 Identities=19% Similarity=0.224 Sum_probs=132.3
Q ss_pred cccCCceeEEEccCcccEE-e-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEc
Q psy6570 3 SISSGNVTRVKREMNLKTV-L-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~~~~-~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD 80 (713)
+...+.|.++++++....+ . ..+..|.+|++|. .+.||+++. ..++|.+++++|+............|.+|++|
T Consensus 37 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~---~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 37 QHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTEN---GANKIGKLSKKGGFTEYPLPQPDSGPYGITEG 112 (300)
T ss_dssp ETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEET---TTTEEEEECTTSCEEEEECSSTTCCEEEEEEC
T ss_pred cCCCCeEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEec---CCCeEEEECCCCCeEEecCCCCCCCCccceEC
Confidence 3446778888877433332 1 2357899999995 478999997 67899999999766544333345789999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
+ ++.||+++.... .|.+++++|+.....+......|.+|++|+ .++||+++...+.|++++.+|.... +. .....
T Consensus 113 ~-~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~-~~-~~~~~ 187 (300)
T 2qc5_A 113 L-NGDIWFTQLNGD-RIGKLTADGTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITNTGKLEE-YP-LPTNA 187 (300)
T ss_dssp S-TTCEEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEE-EE-CSSTT
T ss_pred C-CCCEEEEccCCC-eEEEECCCCCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECCCCcEEE-ee-CCCCC
Confidence 6 788999997666 899999986544332333567899999996 4669999998899999999766543 22 22235
Q ss_pred ccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 161 YKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 161 ~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
..|.+|+++ ++.||+++...+.|++++..
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 678899987 67899999888899999873
No 60
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.47 E-value=8.9e-13 Score=137.14 Aligned_cols=177 Identities=15% Similarity=0.086 Sum_probs=129.0
Q ss_pred ceeEEEccCcc-cEEe-----cCCCCCceEEEeccCCeEEEeecCC--------------CCCCeEEEEecCCceEEEEE
Q psy6570 8 NVTRVKREMNL-KTVL-----SNLHDPRGVAVDWVGKNLYWTDAGG--------------RSSNNIMVSTLEGRKKRTLL 67 (713)
Q Consensus 8 ~I~~~~~~~~~-~~~~-----~~~~~p~gla~D~~~~~ly~td~~~--------------~~~~~I~~~~~~G~~~~~l~ 67 (713)
.|.++++++.. +++. ..+..|.+|++|+..++||++|... ...++|+++++++...+.+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 37777776432 3332 1346799999997457999999731 01367999998765555443
Q ss_pred cCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC---CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC--------
Q psy6570 68 NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK---NKFNLVDNNIQWPTGITIDYPSQRLYWADPK-------- 136 (713)
Q Consensus 68 ~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~---~~~~l~~~~~~~p~glavd~~~~~LY~~d~~-------- 136 (713)
..+..|++|++++..+.||++|...+ +|+++++++. ..+++.. ... |.+|++|+ +++||+++..
T Consensus 182 -~~~~~p~gia~~~dg~~lyv~d~~~~-~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 182 -KELHVPGGAEVSADSSFVLVAEFLSH-QIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNA-DGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp -EEESCCCEEEECTTSSEEEEEEGGGT-EEEEEESSSTTTTCEEEEEE-CSS-EEEEEECT-TSCEEEEEEEETTSSTTS
T ss_pred -cCCccCcceEECCCCCEEEEEeCCCC-eEEEEECCCCcCCccceEEe-CCC-CCCeEECC-CCCEEEEecCcccccccC
Confidence 34688999999987778999998877 9999999873 2334433 223 99999996 5689999865
Q ss_pred --CCcEEEEeCCCCceeEEEecC-CCCccceeeeeeCCeEEEEeCCCCcEEEEccc
Q psy6570 137 --ARTIESINLNGKDRFVVYHTE-DNGYKPYKLEVFEDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 137 --~~~I~~~~~~g~~~~~~~~~~-~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~ 189 (713)
.++|.+++.+|.....+.... ..+..|.++...+++||+++...++|.+++..
T Consensus 257 ~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 257 RVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 578999999987666555432 12456778887889999999999999999864
No 61
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.46 E-value=8.5e-14 Score=148.04 Aligned_cols=174 Identities=24% Similarity=0.605 Sum_probs=115.8
Q ss_pred CeeecCCCcccCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCcc------------CCC--CCCCCC
Q psy6570 329 PHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESR------------ICE--NKCHNG 394 (713)
Q Consensus 329 ~~C~C~~g~~G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~------------~C~--~~C~~~ 394 (713)
..|.|++||+|+.|+. .| .||.++|.|.+. +++|.|++||+|..|+.. .|. ..|.++
T Consensus 185 ~~c~C~~g~~G~~C~~-~C--~~C~~~G~C~~~------~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~ 255 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNH-LC--TACMNNGVCHED------TGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSY 255 (423)
T ss_dssp EECSSCTTEESTTSCE-EC--CCCCTTCEECTT------TCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTC
T ss_pred cCCcCCCCCCCCCCCC-CC--CCCCCCCEEECC------CCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCC
Confidence 4577888888887775 23 267777888652 457888888888877742 232 457777
Q ss_pred CEEEcCCCeeeCCCCCccCCCCcCCCCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCC-CCCeeecCCCCCeec
Q psy6570 395 GTCIATTQTCVCPPGFTGDTCQQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYC-VNGECSITDSGPKCM 473 (713)
Q Consensus 395 ~~C~~~~~~C~C~~g~~g~~C~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~-~~~~C~~~~~~~~C~ 473 (713)
+.|...++.|.|++||+|..|+. .|.+||+|..|+. .| .| +++.|.+.. .|.
T Consensus 256 g~C~~~~~~C~C~~G~~G~~C~~---------------------~C~~G~~G~~C~~-~C--~C~ngg~C~~~~---~C~ 308 (423)
T 2gy5_A 256 VFCLPDPYGCSCATGWKGLQCNE---------------------ACHPGFYGPDCKL-RC--SCNNGEMCDRFQ---GCL 308 (423)
T ss_dssp CEEETTTTEEECCBTCBSGGGCB---------------------CCCTTBCSBTTCC-BC--CCTTCCEEETTT---EEE
T ss_pred CEECCCCCeEEeCCCcccccccC---------------------ccCCCCcCCcccc-cc--cCCCCCEecCCC---ceE
Confidence 88887788999999999987762 4777888887763 23 23 356787664 488
Q ss_pred CCCCccCCCCCCccccCC-----CCCCcccCCCCccCCCCCCCCCCCC---cEEcCCCCCeeccCCCCCCCCCC
Q psy6570 474 CSPGYSGKKCDTCTCLNG-----DSGPKCMCSPGYSGKKCDTCTCLNG---GTCIPNSKNNVCKCPSQYTGRRC 539 (713)
Q Consensus 474 C~~G~~g~~C~~~~C~~~-----~~~~~C~C~~G~~g~~C~~~~C~~~---g~C~~~~~~~~C~C~~g~~G~~C 539 (713)
|.+||+|..|+...+... .....|.|.+||+|..|....|... .... ....+.|.++.+|.+...
T Consensus 309 C~~G~~G~~Ce~~~~~~~~~~~~~~~~~~~c~~g~~g~~C~~~~~~~~~~~~~~~-~~~~G~cl~~~~~~~~d~ 381 (423)
T 2gy5_A 309 CSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTL-VKPDGTVLHPKDFNHTDH 381 (423)
T ss_dssp CCTTCBSTTSCBCSSCCCCCEECSCCSBCCEESEEECCEEEEECTTCCCGGGEEE-ECTTSCEECCSEEEECSS
T ss_pred CCCCCcCCCCccCccCCcCcceecCCCeEEeCCCccCCcccccCCcCCCCceEEE-ECCCeEEEeCCCcCcccc
Confidence 999999988886532211 1234578889999887765444321 1111 123467888887766544
No 62
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.44 E-value=5.4e-12 Score=128.89 Aligned_cols=177 Identities=17% Similarity=0.211 Sum_probs=132.0
Q ss_pred ccCCceeEEEccCcccEEe--cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 4 ISSGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~~~--~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
...+.|+++++++..+.+. .....|.+|++|+ .++||+++. ..+.|.+++++|+............|.+|++|+
T Consensus 75 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~---~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 75 NAANKIGRITKKGIIKEYTLPNPDSAPYGITEGP-NGDIWFTEM---NGNRIGRITDDGKIREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp TTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEET---TTTEEEEECTTCCEEEEECSSTTCCEEEEEECT
T ss_pred CCCCeEEEECCCCcEEEEeCCCcCCCceeeEECC-CCCEEEEec---CCceEEEECCCCCEEEecCCCCCCCCceEEEcC
Confidence 3456788888776543332 2456899999996 478999987 578999999987766554444567899999996
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
++.||+++.... .|++++++|+.....+......|.+|++|+. ++||+++...+.|.+++.++.... +. ......
T Consensus 151 -~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~-~~-~~~~~~ 225 (299)
T 2z2n_A 151 -DNALWFTENQNN-AIGRITESGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITTSGEITE-FK-IPTPNA 225 (299)
T ss_dssp -TSCEEEEETTTT-EEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEE-EE-CSSTTC
T ss_pred -CCCEEEEeCCCC-EEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECCCCcEEE-EE-CCCCCC
Confidence 679999987666 8999998655443323345678999999964 779999988899999999665332 22 222356
Q ss_pred cceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 162 KPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 162 ~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
.|.+|+++ +++||+++...+.|.++++.
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CceeEEECCCCCEEEeccCCceEEEECCC
Confidence 78899987 56899999888999999873
No 63
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=4.7e-12 Score=130.57 Aligned_cols=179 Identities=17% Similarity=0.228 Sum_probs=130.5
Q ss_pred CCcccCCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEc-C--CCCCcceE
Q psy6570 1 MASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN-T--GLNEPYDI 77 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~-~--~~~~p~~i 77 (713)
++++.+++|+++++++..+++......|.+|++|+. ++||+++. ....|.+++++|+....... . .+..|++|
T Consensus 61 ~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~d-G~l~v~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i 136 (305)
T 3dr2_A 61 WSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQ-QRLVHCEH---GRRAITRSDADGQAHLLVGRYAGKRLNSPNDL 136 (305)
T ss_dssp EEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTT-SCEEEEET---TTTEEEEECTTSCEEEEECEETTEECSCCCCE
T ss_pred EEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCC-CCEEEEEC---CCCEEEEECCCCCEEEEEeccCCCccCCCCCE
Confidence 356778999999987765555666778999999975 67999987 56889999999765433221 1 25679999
Q ss_pred EEcCCCCcEEEEcc--CC--------------CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC----
Q psy6570 78 ALEPLSGRMFWTEL--GI--------------KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA---- 137 (713)
Q Consensus 78 avD~~~~~ly~td~--~~--------------~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~---- 137 (713)
++|+ +|.||+||. +. ...|++++.++...+.+. .+..|++|+++++++.|||++...
T Consensus 137 ~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 137 IVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp EECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---C
T ss_pred EECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCC
Confidence 9996 788999873 11 237999988644444444 677899999999888999999864
Q ss_pred -CcEEEEeCCCCc---eeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccC
Q psy6570 138 -RTIESINLNGKD---RFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 138 -~~I~~~~~~g~~---~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~ 190 (713)
++|+++++++.. .+++... ....|.+|.++ +++||++. .+.|+++++.+
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g 267 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDG 267 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTSCEEECC--SSEEEEECTTS
T ss_pred CCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCCCEEEec--CCcEEEECCCC
Confidence 789999987643 2233322 23468888887 56777776 34699998753
No 64
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=6.3e-12 Score=131.05 Aligned_cols=201 Identities=13% Similarity=0.131 Sum_probs=139.6
Q ss_pred CcccCCceeEEEccCcccE-EecCCC------CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 2 ASISSGNVTRVKREMNLKT-VLSNLH------DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~-~~~~~~------~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
++...++|.++++.+.+.+ .+.... .|.+|+++ +++||+++++ ..+.|.++++........+..+ ..|
T Consensus 100 ~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~--~~~~v~viD~~t~~~~~~i~~g-~~p 174 (328)
T 3dsm_A 100 TQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWS--YQNRILKIDTETDKVVDELTIG-IQP 174 (328)
T ss_dssp EEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECT--TCCEEEEEETTTTEEEEEEECS-SCB
T ss_pred EECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCC--CCCEEEEEECCCCeEEEEEEcC-CCc
Confidence 3345688889988765422 233333 89999994 7899999972 2679999998765444334333 679
Q ss_pred ceEEEcCCCCcEEEEccCC---------CCeEEEEecCCCCcEEEEeC-CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEe
Q psy6570 75 YDIALEPLSGRMFWTELGI---------KPRISGASIDGKNKFNLVDN-NIQWPTGITIDYPSQRLYWADPKARTIESIN 144 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~---------~~~I~~~~~dG~~~~~l~~~-~~~~p~glavd~~~~~LY~~d~~~~~I~~~~ 144 (713)
.+|++|+ +|+||++..+. ...|++++++.......+.. ....|++|++++++++||+++. .|++++
T Consensus 175 ~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d 250 (328)
T 3dsm_A 175 TSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMP 250 (328)
T ss_dssp CCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEE
T ss_pred cceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEE
Confidence 9999997 67899998765 23899999875433322322 2347999999999999999986 899999
Q ss_pred CCCCcee--EEEecCCCCccceeeeee--CCeEEEEe----CCCCcEEEEcccCCCcceeeeccccccccEEEEeeccc
Q psy6570 145 LNGKDRF--VVYHTEDNGYKPYKLEVF--EDNLYFST----YRTNNILKINKFGNSDFNVLANNLNRASDVLILQENKQ 215 (713)
Q Consensus 145 ~~g~~~~--~~~~~~~~~~~p~~i~~~--~~~ly~td----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q 215 (713)
++..... .+... ....|.+|+++ +++||+++ +..+.|.+++.. +.....+.. ...|.++..-++...
T Consensus 251 ~~t~~~~~~~~~~~--~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~~~~~~~ 325 (328)
T 3dsm_A 251 VEADRVPVRPFLEF--RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCWKLEHHH 325 (328)
T ss_dssp TTCSSCCSSCSBCC--CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEEECCCCC
T ss_pred CCCCceeeeeeecC--CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEEeccccc
Confidence 8754431 11111 14578888885 68999999 788999999987 555444443 356777766555443
No 65
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.43 E-value=1.2e-13 Score=124.83 Aligned_cols=109 Identities=23% Similarity=0.601 Sum_probs=83.7
Q ss_pred CCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCC---CCCCCcEEeecCCCceeeCCCCCcCC---
Q psy6570 511 CTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPN---YCSNNGTCVLIEGKPSCKCLPPYSGK--- 584 (713)
Q Consensus 511 ~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~G~--- 584 (713)
.+|.++++|++. |+|.|++||+|..-........|. ++++|... +|.++++|+++.++|+|.|++||+|.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 379899999874 899999999984200000011121 26788864 89999999999999999999999987
Q ss_pred ---------CCCcCCCCCCC---CCCCCCCCeEecCCCCcceeecCCCcccCCCC
Q psy6570 585 ---------QCTEREDSPSC---HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCS 627 (713)
Q Consensus 585 ---------~C~~~~~~~~C---~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~ 627 (713)
.|++ +++| ..+|.++++|++.. ++|+|.|++||+|....
T Consensus 83 ~~~~~~~~~~C~d---ideC~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 83 KTFKNESENTCQD---VDECSSGQHQCDSSTVCFNTV-GSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp SCBSSGGGCCEEE---CCHHHHTCCCCCTTSEEEECS-SCEEEECCSSSCBCTTC
T ss_pred cccccCCCCCcCC---ccCccCcCCCCCCCCEEECCC-CCEEeeCCCCcccCCCC
Confidence 4554 4888 37899999999886 99999999999987653
No 66
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.42 E-value=2.3e-13 Score=149.40 Aligned_cols=118 Identities=25% Similarity=0.636 Sum_probs=96.2
Q ss_pred CCCCCCCCCCCcEEcCCCC-Ceec-cCCCCCCC--CCCcccCCCCCCCCCCCCCCCCC--CCCCc---EEeecCCCceee
Q psy6570 506 KKCDTCTCLNGGTCIPNSK-NNVC-KCPSQYTG--RRCECAVGDTSCASLANKCTPNY--CSNNG---TCVLIEGKPSCK 576 (713)
Q Consensus 506 ~~C~~~~C~~~g~C~~~~~-~~~C-~C~~g~~G--~~C~~~~~~~~c~~~~~~C~~~~--C~~~~---~C~~~~g~~~C~ 576 (713)
++|...||.++++|+++.+ +|+| .|++||+| ..|+ . +++|..++ |.+++ +|+++.++|+|.
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-D---------iDEC~~~p~~C~~gg~~~~CvNt~gsY~C~ 73 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-D---------LDECALVPDICFSTSKVPRCVNTQPGFHCL 73 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-B---------CCTTTTSCCCSCCCSSSCCEEECSSSEEEC
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-c---------cccccCCCCcccCCccccceeeccCceecc
Confidence 3566679999999999875 5999 99999998 6776 2 57998777 99988 999999999998
Q ss_pred -CCCCCcCCCCCc------------CCCCCCCC---CCCCCCCeEecCC---CCcceeecCCCccc--CCCC---cCCCC
Q psy6570 577 -CLPPYSGKQCTE------------REDSPSCH---NYCDNAGLCSYSK---QGKPVCTCVNGWSG--ITCS---ERVSC 632 (713)
Q Consensus 577 -C~~G~~G~~C~~------------~~~~~~C~---~~C~~~g~C~~~~---~g~~~C~C~~G~~G--~~C~---~~~~C 632 (713)
|++||+|..|+. ..++++|. ++|.++++|++.. .++|+|.|++||+| ..|+ ++++|
T Consensus 74 ~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC 153 (634)
T 1yo8_A 74 PCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGW 153 (634)
T ss_dssp CCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSS
T ss_pred cCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccc
Confidence 999999887541 11248883 5899999999875 37999999999998 6886 56677
Q ss_pred C
Q psy6570 633 A 633 (713)
Q Consensus 633 ~ 633 (713)
.
T Consensus 154 ~ 154 (634)
T 1yo8_A 154 P 154 (634)
T ss_dssp C
T ss_pred c
Confidence 5
No 67
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.41 E-value=1.3e-13 Score=124.67 Aligned_cols=101 Identities=24% Similarity=0.639 Sum_probs=84.6
Q ss_pred CCCCCCcEEeecCCCceeeCCCCCcC---------CCCCcCCCCCCCCC----CCCCCCeEecCCCCcceeecCCCcccC
Q psy6570 558 NYCSNNGTCVLIEGKPSCKCLPPYSG---------KQCTEREDSPSCHN----YCDNAGLCSYSKQGKPVCTCVNGWSGI 624 (713)
Q Consensus 558 ~~C~~~~~C~~~~g~~~C~C~~G~~G---------~~C~~~~~~~~C~~----~C~~~g~C~~~~~g~~~C~C~~G~~G~ 624 (713)
++|.++++|++. |+|.|++||+| ..|+++ ++|.. +|.++++|++.. ++|+|.|++||+|.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~di---deC~~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDI---NECATLSKVSCGKFSDCWNTE-GSYDCVCSPGYEPV 79 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEEC---CGGGC----CCCTTEEEEECS-SCEEEEECTTEEET
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCcc---ccccCCCCCCCCCCCEEEcCC-CCeEeECCCCcccC
Confidence 468899999864 89999999998 578765 88832 799999999887 89999999999986
Q ss_pred ------------CCCcCCCCC---CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCcc
Q psy6570 625 ------------TCSERVSCA---HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTL 671 (713)
Q Consensus 625 ------------~C~~~~~C~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~ 671 (713)
.|+++++|. ++|.++++|++ ..++|+|.|++||+|..+...
T Consensus 80 ~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n------~~g~y~C~C~~Gy~g~~~~~~ 135 (143)
T 2bou_A 80 SGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFN------TVGSYSCRCRPGWKPRHGIPN 135 (143)
T ss_dssp TCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEE------CSSCEEEECCSSSCBCTTCCS
T ss_pred cCccccccCCCCCcCCccCccCcCCCCCCCCEEEC------CCCCEEeeCCCCcccCCCCcc
Confidence 677778886 68998899987 456799999999999987543
No 68
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.41 E-value=1.3e-11 Score=126.02 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=130.1
Q ss_pred ccCCceeEEEccCcccEEe--cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 4 ISSGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~~~--~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
...+.|.++++++....+. .....|.+|++|+ .+.||+++. ..+.|.+++++|+............|.+|++|+
T Consensus 33 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~---~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 108 (299)
T 2z2n_A 33 HKANMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTEN---AANKIGRITKKGIIKEYTLPNPDSAPYGITEGP 108 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEET---TTTEEEEECTTSCEEEEECSSTTCCEEEEEECT
T ss_pred cCCCcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCC---CCCeEEEECCCCcEEEEeCCCcCCCceeeEECC
Confidence 3456788888774333332 2457799999996 478999987 678899999987654433333457899999996
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
++.||+++.... .|.+++++|+............|.+|++|+ +++||+++...+.|++++.+|........ ....
T Consensus 109 -~g~l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~~ 183 (299)
T 2z2n_A 109 -NGDIWFTEMNGN-RIGRITDDGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITESGDITEFKIP--TPAS 183 (299)
T ss_dssp -TSCEEEEETTTT-EEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECS--STTC
T ss_pred -CCCEEEEecCCc-eEEEECCCCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCC--CCCC
Confidence 689999987655 899999866544333333567899999995 56999999888999999996554332121 2355
Q ss_pred cceeeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 162 KPYKLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 162 ~p~~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
.|.+|+++ ++.||+++...+.|.++++
T Consensus 184 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 184 GPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred cceeEEECCCCCEEEEccCCceEEEECC
Confidence 78889887 5789999988889999998
No 69
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.40 E-value=8.2e-12 Score=131.28 Aligned_cols=182 Identities=20% Similarity=0.274 Sum_probs=124.4
Q ss_pred CceeEEEccCcccEE------ecCCCCCceEEEecc---CCeEEEeecCCCC--CCeEEEEecCCc---eEEEEEc----
Q psy6570 7 GNVTRVKREMNLKTV------LSNLHDPRGVAVDWV---GKNLYWTDAGGRS--SNNIMVSTLEGR---KKRTLLN---- 68 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~------~~~~~~p~gla~D~~---~~~ly~td~~~~~--~~~I~~~~~~G~---~~~~l~~---- 68 (713)
++|++++ ++..+.+ ..++..|.||++++. ++.||+++..... .++|.++++++. ..++++.
T Consensus 51 g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~ 129 (352)
T 2ism_A 51 GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA 129 (352)
T ss_dssp TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC
Confidence 7788887 5443322 234678999999987 7899999972100 178999998864 2233332
Q ss_pred --CCCCCcceEEEcCCCCcEEEEccC------------CCCeEEEEecCCC-------------CcEEEEeCCCCCCeeE
Q psy6570 69 --TGLNEPYDIALEPLSGRMFWTELG------------IKPRISGASIDGK-------------NKFNLVDNNIQWPTGI 121 (713)
Q Consensus 69 --~~~~~p~~iavD~~~~~ly~td~~------------~~~~I~~~~~dG~-------------~~~~l~~~~~~~p~gl 121 (713)
.....|.+|+++| +|+||+++.. ..++|+|++.||+ ..+ ++...+..|.||
T Consensus 130 ~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~-i~a~G~rnp~g~ 207 (352)
T 2ism_A 130 RPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPE-VYSLGHRNPQGL 207 (352)
T ss_dssp CTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTT-EEEECCSEECCC
T ss_pred CCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCcc-EEEEcCCCcccE
Confidence 2245789999997 6799999732 1258999999983 333 344578889999
Q ss_pred EEeCCCCeEEEEcCCCCc--------EEEEeCCCC--------------ceeEEEecCCCCccceeeeeeCCeEEEEeCC
Q psy6570 122 TIDYPSQRLYWADPKART--------IESINLNGK--------------DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR 179 (713)
Q Consensus 122 avd~~~~~LY~~d~~~~~--------I~~~~~~g~--------------~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~ 179 (713)
++|+.+++||++|...+. |.++...+. ....+... .....|.+++++++.||++++.
T Consensus 208 a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ap~G~~~~~G~l~v~~~~ 286 (352)
T 2ism_A 208 AWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFPPGNLAFFRGDLYVAGLR 286 (352)
T ss_dssp EECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCCEEEEEEETTEEEEEETT
T ss_pred EEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCCCCCcceEEECCEEEEEECC
Confidence 999888999999976665 555543220 00111111 1134688999999999999999
Q ss_pred CCcEEEEcccCCC
Q psy6570 180 TNNILKINKFGNS 192 (713)
Q Consensus 180 ~~~i~~~~~~~~~ 192 (713)
.++|++++..+..
T Consensus 287 ~~~v~~v~~~~~~ 299 (352)
T 2ism_A 287 GQALLRLVLEGER 299 (352)
T ss_dssp TTEEEEEEEEEET
T ss_pred CCEEEEEEECCCC
Confidence 9999999876543
No 70
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.39 E-value=3.5e-11 Score=123.27 Aligned_cols=193 Identities=13% Similarity=0.141 Sum_probs=135.4
Q ss_pred CcccCCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEec-CCceEEEEEc---CCCCCcceE
Q psy6570 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL-EGRKKRTLLN---TGLNEPYDI 77 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~---~~~~~p~~i 77 (713)
++...+.|+++++++..+.+......|.+|++|+. ++||+++. ..+.|.++++ +|+....+.. ..+..|++|
T Consensus 45 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~d-g~l~v~~~---~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i 120 (296)
T 3e5z_A 45 SDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQ-GHLIACSH---GLRRLERQREPGGEWESIADSFEGKKLNSPNDV 120 (296)
T ss_dssp EEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTT-CCEEEEET---TTTEEEEECSTTCCEEEEECEETTEECCCCCCE
T ss_pred EeCCCCEEEEEECCCCeEEEECCCCCcceeeECCC-CcEEEEec---CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCE
Confidence 45677889999988774444556677999999975 67999987 5689999998 6654433211 124678999
Q ss_pred EEcCCCCcEEEEccC----------------CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEE
Q psy6570 78 ALEPLSGRMFWTELG----------------IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIE 141 (713)
Q Consensus 78 avD~~~~~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~ 141 (713)
++|+ +|+||++|.. ....|++++.+|+. ..+...+..|++|+++++++.| |++...++|+
T Consensus 121 ~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~ 196 (296)
T 3e5z_A 121 CLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL--SAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATH 196 (296)
T ss_dssp EECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE--EEEECCCSSEEEEEECTTSCEE-EEETTTTEEE
T ss_pred EECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE--EEeecCCCCCccEEECCCCCEE-EEeCCCCeEE
Confidence 9997 7889998641 12379999888442 3334578889999999877777 9999999999
Q ss_pred EEeCC--CCc---eeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEE
Q psy6570 142 SINLN--GKD---RFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLI 209 (713)
Q Consensus 142 ~~~~~--g~~---~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v 209 (713)
+++++ |.. ..++ .. ....|.+|+++ +++||++. .+.|.++++. +.....+..... +..+.+
T Consensus 197 ~~~~~~~g~~~~~~~~~-~~--~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f 263 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHF-TV--EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCF 263 (296)
T ss_dssp EEEECSSSCEEEEEEEE-CC--SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEE
T ss_pred EEEECCCCcCcCCCeEe-eC--CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEE
Confidence 99985 332 2333 22 34578889987 66888888 6789999886 333333333222 444443
No 71
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.38 E-value=3.9e-11 Score=123.69 Aligned_cols=157 Identities=16% Similarity=0.108 Sum_probs=117.9
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCC-CeEEEEecCC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIK-PRISGASIDG 104 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~-~~I~~~~~dG 104 (713)
..|++|++|+ +++|||+|. ..++|++++++|+....+. .. ..|.+|++|+ ++.||+++.+.+ .+|++++...
T Consensus 32 ~~pegia~~~-~g~lyv~d~---~~~~I~~~d~~g~~~~~~~-~~-~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNH---EVGEIVSITPDGNQQIHAT-VE-GKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEET---TTTEEEEECTTCCEEEEEE-CS-SEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeC---CCCeEEEECCCCceEEEEe-CC-CCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence 7899999998 577999998 7889999999997554433 32 5799999996 567999997644 2588877544
Q ss_pred CCcEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE-e-------cCCCCccceeeeeeCCeEEE
Q psy6570 105 KNKFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY-H-------TEDNGYKPYKLEVFEDNLYF 175 (713)
Q Consensus 105 ~~~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~-~-------~~~~~~~p~~i~~~~~~ly~ 175 (713)
...+.++. .....|+|+++. ..+++|++|...++|++++.++...+++. . ....+..|.+|+.++++||+
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv 183 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYV 183 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEE
T ss_pred CeEEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEE
Confidence 34444443 345678999986 56789999998899999998764322221 1 11235678899777889999
Q ss_pred EeCCCCcEEEEcccC
Q psy6570 176 STYRTNNILKINKFG 190 (713)
Q Consensus 176 td~~~~~i~~~~~~~ 190 (713)
++...++|++++..+
T Consensus 184 ~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDS 198 (306)
T ss_dssp EETTTTEEEEEEBCT
T ss_pred EeCCCCEEEEEEeCC
Confidence 999999999998764
No 72
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.37 E-value=4.4e-13 Score=149.07 Aligned_cols=137 Identities=31% Similarity=0.756 Sum_probs=103.5
Q ss_pred CCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCC----CCCCCCcEEeecCCCceeeCC------
Q psy6570 509 DTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTP----NYCSNNGTCVLIEGKPSCKCL------ 578 (713)
Q Consensus 509 ~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~----~~C~~~~~C~~~~g~~~C~C~------ 578 (713)
...+|.++|+|. .+.|.|++||+|..|++..+...-......|.. .+|+++|+|+. .+|.|+
T Consensus 433 ~s~~Cs~~G~C~----~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~ 504 (687)
T 3k6s_B 433 DRSLCHGKGFLE----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPG 504 (687)
T ss_dssp CSSTGGGSEEES----SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTT
T ss_pred CCCCCCCCCEEe----CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCC
Confidence 345788889997 368999999999999965432110000123543 35999999993 389999
Q ss_pred CCCcCCCCCcCCCCCCCC----CCCCC--CCeEecCCCCcceeecCCCcccCCCCc---CCCCCC----CCCCCCeecCC
Q psy6570 579 PPYSGKQCTEREDSPSCH----NYCDN--AGLCSYSKQGKPVCTCVNGWSGITCSE---RVSCAH----FCFNGGTCREQ 645 (713)
Q Consensus 579 ~G~~G~~C~~~~~~~~C~----~~C~~--~g~C~~~~~g~~~C~C~~G~~G~~C~~---~~~C~~----~C~~~~~C~~~ 645 (713)
+||+|..|+.. ...|. ..|.+ +|+|.. .+|.|++||+|..|+. ...|.. +|.++|+|..
T Consensus 505 ~G~~G~~Ce~~--~~~C~~~~~~~C~~~~~G~C~~-----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~- 576 (687)
T 3k6s_B 505 KLIYGQYCECD--TINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC- 576 (687)
T ss_dssp CCEESTTSCEE--SSCSCEETTEETSHHHHEEEET-----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-
T ss_pred CCccccccccc--cccccCCCCcCcCCCCCCeEEC-----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-
Confidence 99999999842 35674 35988 899984 2699999999999983 245763 6888888876
Q ss_pred CCccCCCCCceeeCCCCcccCCCCc
Q psy6570 646 NYSLDPDLKPICICPRGYAGVRCQT 670 (713)
Q Consensus 646 ~~~~~~~~~~~C~C~~Gy~G~~C~~ 670 (713)
++|.|++||+|.+|+.
T Consensus 577 ---------g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 577 ---------NVCECHSGYQLPLCQE 592 (687)
T ss_dssp ---------SCBCCSTTCCTTTTCC
T ss_pred ---------CEEECCCCCcCCCCCC
Confidence 6899999999999997
No 73
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.36 E-value=5.5e-13 Score=147.49 Aligned_cols=58 Identities=31% Similarity=0.773 Sum_probs=43.0
Q ss_pred CeecCCCCccCCCCCCccccCCCCCCcccCCCCccCCCC------CCCCCCCCcEEcCC----CCCeeccCCCCCCCCCC
Q psy6570 470 PKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKC------DTCTCLNGGTCIPN----SKNNVCKCPSQYTGRRC 539 (713)
Q Consensus 470 ~~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C------~~~~C~~~g~C~~~----~~~~~C~C~~g~~G~~C 539 (713)
..|.|.++|.|..|+. |++||+|..| ..++|.++++|.+. ..+++|.|++||+|..|
T Consensus 407 ~~C~C~~g~~G~~C~~-------------C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~C 473 (525)
T 4aqs_A 407 GQCRCKLHVEGERCDV-------------CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRC 473 (525)
T ss_dssp SCCCBCTTEETTTTCE-------------ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTT
T ss_pred CccCCCCCCCCCcccC-------------CCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCc
Confidence 4688888888888763 7888887544 45677766666543 23678999999999988
Q ss_pred c
Q psy6570 540 E 540 (713)
Q Consensus 540 ~ 540 (713)
+
T Consensus 474 e 474 (525)
T 4aqs_A 474 D 474 (525)
T ss_dssp C
T ss_pred c
Confidence 6
No 74
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.34 E-value=8e-13 Score=145.17 Aligned_cols=113 Identities=25% Similarity=0.552 Sum_probs=92.1
Q ss_pred CCCCCCCCCCCCcEEeecCC-Ccee-eCCCCCcC--CCCCcCCCCCCC-CCC--CCCCC---eEecCCCCcceee-cCCC
Q psy6570 552 ANKCTPNYCSNNGTCVLIEG-KPSC-KCLPPYSG--KQCTEREDSPSC-HNY--CDNAG---LCSYSKQGKPVCT-CVNG 620 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g-~~~C-~C~~G~~G--~~C~~~~~~~~C-~~~--C~~~g---~C~~~~~g~~~C~-C~~G 620 (713)
+++|.+++|.++++|+++.+ +|+| .|++||+| ..|+++ ++| ..+ |.+++ +|++.. ++|+|. |++|
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDi---DEC~~~p~~C~~gg~~~~CvNt~-gsY~C~~C~~G 78 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDL---DECALVPDICFSTSKVPRCVNTQ-PGFHCLPCPPR 78 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBC---CTTTTSCCCSCCCSSSCCEEECS-SSEEECCCCTT
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcccc---ccccCCCCcccCCccccceeecc-CceecccCCCC
Confidence 67899999999999999875 5999 99999998 789865 888 344 99988 999887 899999 9999
Q ss_pred cccCC---------------CCcCCCCC---CCCCCCCeecCCCCccCCCCCceeeCCCCccc--CCCCc
Q psy6570 621 WSGIT---------------CSERVSCA---HFCFNGGTCREQNYSLDPDLKPICICPRGYAG--VRCQT 670 (713)
Q Consensus 621 ~~G~~---------------C~~~~~C~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G--~~C~~ 670 (713)
|+|.. |+.+.+|. ++|.++++|++... ...++|+|.|++||+| ..|+.
T Consensus 79 y~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~--~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 79 YRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGH--FSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp EEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCT--TCSSSEEEEECTTEEESSSSEEE
T ss_pred cccCccccccccccccCCCcccccccccCCCcccccCcccccccc--ccccceeeeccCCccccCccccc
Confidence 99886 55677886 48999999987110 0126799999999998 68864
No 75
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.34 E-value=4.4e-11 Score=125.63 Aligned_cols=182 Identities=16% Similarity=0.174 Sum_probs=126.1
Q ss_pred CceeEEEccCcccEEe------cCCCCCceEEEecc---CCeEEEeecCCCCC----CeEEEEecCCc-----eEEEEEc
Q psy6570 7 GNVTRVKREMNLKTVL------SNLHDPRGVAVDWV---GKNLYWTDAGGRSS----NNIMVSTLEGR-----KKRTLLN 68 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~~------~~~~~p~gla~D~~---~~~ly~td~~~~~~----~~I~~~~~~G~-----~~~~l~~ 68 (713)
++|++++.++. +++. .+...|.|||+++. ++.||+++...... ++|.++++++. ..++++.
T Consensus 49 g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~ 127 (354)
T 3a9g_A 49 GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLID 127 (354)
T ss_dssp TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEE
T ss_pred CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEE
Confidence 78888876665 3332 34567999999987 78999998610012 78999998875 2333332
Q ss_pred ----CCCCCcceEEEcCCCCcEEEEccC------------CCCeEEEEecCCCC-------cEEEEeCCCCCCeeEEEeC
Q psy6570 69 ----TGLNEPYDIALEPLSGRMFWTELG------------IKPRISGASIDGKN-------KFNLVDNNIQWPTGITIDY 125 (713)
Q Consensus 69 ----~~~~~p~~iavD~~~~~ly~td~~------------~~~~I~~~~~dG~~-------~~~l~~~~~~~p~glavd~ 125 (713)
.....|.+|+++| +|+||++... ..++|+|++.||+. ...++...+..|.||++|+
T Consensus 128 ~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 128 GIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp EEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECT
T ss_pred cCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeC
Confidence 2345789999997 7799999632 12489999999972 2234455889999999998
Q ss_pred CCCeEEEEcCCCCc---EEEEeCCCCc---------------eeEEEecCCCCccceeeee--------eCCeEEEEeCC
Q psy6570 126 PSQRLYWADPKART---IESINLNGKD---------------RFVVYHTEDNGYKPYKLEV--------FEDNLYFSTYR 179 (713)
Q Consensus 126 ~~~~LY~~d~~~~~---I~~~~~~g~~---------------~~~~~~~~~~~~~p~~i~~--------~~~~ly~td~~ 179 (713)
.+++||++|...++ |.++.. |.+ ...+.........|.++++ +++.||++++.
T Consensus 207 ~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~ 285 (354)
T 3a9g_A 207 ASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLR 285 (354)
T ss_dssp TTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETT
T ss_pred CCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcC
Confidence 88999999987654 555543 221 0111111011346888988 57899999999
Q ss_pred CCcEEEEcccCC
Q psy6570 180 TNNILKINKFGN 191 (713)
Q Consensus 180 ~~~i~~~~~~~~ 191 (713)
.++|++++..+.
T Consensus 286 ~~~v~~~~~~~~ 297 (354)
T 3a9g_A 286 GSMLAAVNFGDN 297 (354)
T ss_dssp TTEEEEEEECGG
T ss_pred CCEEEEEEECCC
Confidence 999999987643
No 76
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.34 E-value=8.5e-13 Score=145.97 Aligned_cols=91 Identities=19% Similarity=0.422 Sum_probs=35.3
Q ss_pred cee-eCCCCCcCCCCCcCCCCCCC-CCCCCCCCeEecCC---CCcceeecCCCcccCCCCc-----------CCCCC-CC
Q psy6570 573 PSC-KCLPPYSGKQCTEREDSPSC-HNYCDNAGLCSYSK---QGKPVCTCVNGWSGITCSE-----------RVSCA-HF 635 (713)
Q Consensus 573 ~~C-~C~~G~~G~~C~~~~~~~~C-~~~C~~~g~C~~~~---~g~~~C~C~~G~~G~~C~~-----------~~~C~-~~ 635 (713)
..| .|.+||+|..|... ..| ...|.++++|.+.. ..+++|.|++||+|..|+. ...|. .+
T Consensus 418 ~~C~~C~~Gy~G~~c~~~---~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~ 494 (525)
T 4aqs_A 418 ERCDVCKEGFYDLSAEDP---YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD 494 (525)
T ss_dssp TTTCEECTTEECCCTTST---TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-------------------
T ss_pred CcccCCCCCCcCCCCCCC---CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCC
Confidence 345 68889988887754 445 34565555554321 2356799999999999963 22343 35
Q ss_pred CCCCCeecCCCCccCCCCCceeeCCCCcccCCCCc
Q psy6570 636 CFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670 (713)
Q Consensus 636 C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~ 670 (713)
|.+++.|... + ...+++|.|++||+|.+|++
T Consensus 495 C~~~gs~~~~--C--~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 495 CDLGGALNNS--C--SEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -----------------------------------
T ss_pred CCCCCccCCc--c--CCCCCeeECCCCCcCCCCCC
Confidence 6666655431 1 12347899999999999974
No 77
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.32 E-value=3.6e-13 Score=116.78 Aligned_cols=100 Identities=22% Similarity=0.604 Sum_probs=79.4
Q ss_pred CCCCCCCCCCCCCcEEeec-CCCceeeCCCCCcCCCCCcCCCCCCCCCCCCCC---CeEecCCCCcceeecCCCcc---c
Q psy6570 551 LANKCTPNYCSNNGTCVLI-EGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNA---GLCSYSKQGKPVCTCVNGWS---G 623 (713)
Q Consensus 551 ~~~~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~C~~~~~~~~C~~~C~~~---g~C~~~~~g~~~C~C~~G~~---G 623 (713)
++++|.+++|.+ +|+++ .++|+|.|++||+|..+. .++|...|.++ +.|.+ . ++|.|.|++||+ |
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~----~~~C~~~C~~~~C~~~C~~-~-~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE----PHRCQMFCNQTACPADCDP-N-TQASCECPEGYILDDG 74 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE----EEEEEECCCSSEEECEECT-T-STTCEECCTTEEEETT
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC----CCccccccCCCCCCCcccC-C-CCeEeECCCCccCCCC
Confidence 368899899974 99999 899999999999998542 13443334333 68876 3 889999999999 8
Q ss_pred CCCCcCCCCC--CCCCCCCeecCCCCccCCCCCceeeCCCCcccC
Q psy6570 624 ITCSERVSCA--HFCFNGGTCREQNYSLDPDLKPICICPRGYAGV 666 (713)
Q Consensus 624 ~~C~~~~~C~--~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~ 666 (713)
..|+++++|. ++| +++|++ ..++|+|.|++||+|.
T Consensus 75 ~~C~dideC~~~~~C--~~~C~n------~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 75 FICTDIDECENGGFC--SGVCHN------LPGTFECICGPDSALA 111 (118)
T ss_dssp TEEEECCHHHHCSSC--SSEEEE------CSSSEEEEECSSSSCE
T ss_pred CccccccccCCCCCC--cCeEEe------CCCCEEEECCCCCccC
Confidence 8999888886 678 578876 4567999999999875
No 78
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.31 E-value=8.1e-14 Score=128.83 Aligned_cols=127 Identities=24% Similarity=0.567 Sum_probs=92.0
Q ss_pred CCC-CCCCCCCcEEcCCCCCeeccCCCCCC----CCCCcccCCCCCCCCCCCC--CCCC--CC--CCCcEEeecCC----
Q psy6570 507 KCD-TCTCLNGGTCIPNSKNNVCKCPSQYT----GRRCECAVGDTSCASLANK--CTPN--YC--SNNGTCVLIEG---- 571 (713)
Q Consensus 507 ~C~-~~~C~~~g~C~~~~~~~~C~C~~g~~----G~~C~~~~~~~~c~~~~~~--C~~~--~C--~~~~~C~~~~g---- 571 (713)
+|. ..+|. +++|+++.++|+|.|++||+ |..|+ + +++ |... +| .++++|++..+
T Consensus 5 eC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d---------~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~ 73 (162)
T 1uzk_A 5 ECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-D---------TRSGNCYLDIRPRGDNGDTACSNEIGVGVS 73 (162)
T ss_dssp GGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-C---------CCCEEEEEEC----------CEEEEEEEEC
T ss_pred cCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-C---------CCCCcccCCCcccCCCCCCcccCCcCCccc
Confidence 454 35786 68999999999999999998 77776 2 233 6532 23 34788998877
Q ss_pred CceeeCCCCCc-CCCCCcCCCCCCCCCCCCCCCeEecCCCCcceeecCC--CcccC----CCCcCCCCC---CCCCCCCe
Q psy6570 572 KPSCKCLPPYS-GKQCTEREDSPSCHNYCDNAGLCSYSKQGKPVCTCVN--GWSGI----TCSERVSCA---HFCFNGGT 641 (713)
Q Consensus 572 ~~~C~C~~G~~-G~~C~~~~~~~~C~~~C~~~g~C~~~~~g~~~C~C~~--G~~G~----~C~~~~~C~---~~C~~~~~ 641 (713)
+|+|.|++||. |..|+. |.....++|.|.|++ ||+|. .|+++++|. ++|.+ ++
T Consensus 74 ~~~C~C~~G~~~~~~C~~----------------C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~ 136 (162)
T 1uzk_A 74 KASCCCSLGKAWGTPCEM----------------CPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GK 136 (162)
T ss_dssp HHHHHTTTCCEETTTTEE----------------CCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SE
T ss_pred CceeeCCCCCCcCCCccc----------------CCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CE
Confidence 79999999998 665541 322334789999998 99975 578888896 45875 68
Q ss_pred ecCCCCccCCCCCceeeCCCCcccCC
Q psy6570 642 CREQNYSLDPDLKPICICPRGYAGVR 667 (713)
Q Consensus 642 C~~~~~~~~~~~~~~C~C~~Gy~G~~ 667 (713)
|++ ..++|+|.|++||+|..
T Consensus 137 C~n------~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 137 CIN------TFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp EEE------CSSCEEEECCTTCCBCT
T ss_pred eEc------CCCCEEeeCCCCccCCC
Confidence 886 45679999999999875
No 79
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.30 E-value=9e-11 Score=123.30 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=114.1
Q ss_pred cccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEE----EcCCCCCcceEEEcCC---CCcEEEE
Q psy6570 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL----LNTGLNEPYDIALEPL---SGRMFWT 89 (713)
Q Consensus 17 ~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l----~~~~~~~p~~iavD~~---~~~ly~t 89 (713)
..++++.++..|++|++++. ++||+++. . ++|.+++ +|+...+. ...++..|.+|+++|. +++||++
T Consensus 22 ~~~~va~~l~~P~~ia~~pd-G~l~V~e~---~-g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLPD-GGMLIAER---P-GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp CEEEEECCCSCEEEEEECTT-SCEEEEET---T-TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEEECCCCCceEEEEcCC-CeEEEEeC---C-CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 34667889999999999976 57999997 3 8999998 77543222 1234678999999987 7899999
Q ss_pred ccCC----CCeEEEEecCCCC---cEEEEe------CCCCCCeeEEEeCCCCeEEEEcC-------------CCCcEEEE
Q psy6570 90 ELGI----KPRISGASIDGKN---KFNLVD------NNIQWPTGITIDYPSQRLYWADP-------------KARTIESI 143 (713)
Q Consensus 90 d~~~----~~~I~~~~~dG~~---~~~l~~------~~~~~p~glavd~~~~~LY~~d~-------------~~~~I~~~ 143 (713)
+... ..+|.|+++++.. .++++. ...+.|.+|++++ +++||+++. ..++|+++
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 8753 1389999988642 233432 2356789999997 459999963 23689999
Q ss_pred eCCC-------------CceeEEEecCCCCccceeeeee--CCeEEEEeCCCCc
Q psy6570 144 NLNG-------------KDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNN 182 (713)
Q Consensus 144 ~~~g-------------~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~ 182 (713)
+.+| ...+++... +.+|.+|+++ .+.||+++...+.
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G---~rnp~g~a~d~~~g~l~v~d~g~~~ 225 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLG---HRNPQGLAWHPKTGELFSSEHGPSG 225 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEEC---CSEECCCEECTTTCCEEEEEECC--
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEc---CCCcccEEEECCCCCEEEEEcCCCC
Confidence 9998 234444443 6789999988 5789999987665
No 80
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.30 E-value=1.3e-13 Score=127.38 Aligned_cols=127 Identities=26% Similarity=0.585 Sum_probs=82.2
Q ss_pred cCC-CCCCCCCcEeccCCCCccccCCCCCc----CCCCc-cCC--CCCC---C---CCCeeecCCC----CCeecCCCCc
Q psy6570 417 QCL-NLKCQNGGVCVNKTTGLECDCPKFYY----GKNCQ-YSQ--CKNY---C---VNGECSITDS----GPKCMCSPGY 478 (713)
Q Consensus 417 ~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~----g~~C~-~~~--C~~~---~---~~~~C~~~~~----~~~C~C~~G~ 478 (713)
+|. +.+|. +++|+++.++|+|.|++||+ |..|+ +++ |... + .++.|.+..+ +|.|.|++||
T Consensus 5 eC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~ 83 (162)
T 1uzk_A 5 ECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGK 83 (162)
T ss_dssp GGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCC
T ss_pred cCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCC
Confidence 565 36786 68999999999999999998 77786 333 5321 1 2445555444 3455555554
Q ss_pred cCCCCCCccccCCCCCCcccCCCCccCCCCCCCCCCCCcEEcCCCCCeeccCCC--CCCCCC---CcccCCCCCCCCCCC
Q psy6570 479 SGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPS--QYTGRR---CECAVGDTSCASLAN 553 (713)
Q Consensus 479 ~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~--g~~G~~---C~~~~~~~~c~~~~~ 553 (713)
.. |..|+. |.. +..++|+|.|++ ||+|.. +..+ ++
T Consensus 84 ~~------------------------~~~C~~--C~~-----~~~~~y~C~C~~g~G~~~~~~~~~c~d---------id 123 (162)
T 1uzk_A 84 AW------------------------GTPCEM--CPA-----VNTSEYKILCPGGEGFRPNPITVILED---------ID 123 (162)
T ss_dssp EE------------------------TTTTEE--CCC-----TTSHHHHHHCTTCTTEEECTTTCCEEE---------CC
T ss_pred Cc------------------------CCCccc--CCC-----CCCCCceeECCCCCCcccCCCCCccCc---------cc
Confidence 40 333331 211 134578899987 888752 2122 67
Q ss_pred CCCC--CCCCCCcEEeecCCCceeeCCCCCcCCC
Q psy6570 554 KCTP--NYCSNNGTCVLIEGKPSCKCLPPYSGKQ 585 (713)
Q Consensus 554 ~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 585 (713)
+|.. .+|.+ ++|+++.|+|+|.|++||+|..
T Consensus 124 eC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 124 ECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp HHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred cccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 8874 46974 7999999999999999999864
No 81
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.30 E-value=4.5e-11 Score=125.54 Aligned_cols=159 Identities=16% Similarity=0.160 Sum_probs=118.5
Q ss_pred ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEE-----cCCCCCcceEEEcCC---CCcEEEE
Q psy6570 18 LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL-----NTGLNEPYDIALEPL---SGRMFWT 89 (713)
Q Consensus 18 ~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~-----~~~~~~p~~iavD~~---~~~ly~t 89 (713)
.++++.++..|++|++++. ++||+++. . ++|.+++.+|+ +.+. ..+...|.+|+++|. +++||++
T Consensus 21 ~~~va~~l~~P~~ia~~pd-G~l~V~e~---~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLGG-GRYLVTER---P-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp EEEEECSCSCEEEEEEEET-TEEEEEET---T-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEeCCCCCCeEEEEcCC-CeEEEEeC---C-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 4566888999999999975 68999997 3 89999988886 3332 234567999999987 7999999
Q ss_pred ccC--CC----CeEEEEecCCC-----CcEEEEe----CCCCCCeeEEEeCCCCeEEEEcC-------------CCCcEE
Q psy6570 90 ELG--IK----PRISGASIDGK-----NKFNLVD----NNIQWPTGITIDYPSQRLYWADP-------------KARTIE 141 (713)
Q Consensus 90 d~~--~~----~~I~~~~~dG~-----~~~~l~~----~~~~~p~glavd~~~~~LY~~d~-------------~~~~I~ 141 (713)
+.. .. .+|.|+++++. ..++++. ...+.|.+|+|++ +++||++.. ..++|+
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ 172 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKIL 172 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred EeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEE
Confidence 863 11 38999998875 1333432 2356789999997 568999963 235899
Q ss_pred EEeCCCC--------ceeEEEecCCCCccceeeeee--CCeEEEEeCCCCc---EEEEc
Q psy6570 142 SINLNGK--------DRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNN---ILKIN 187 (713)
Q Consensus 142 ~~~~~g~--------~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~---i~~~~ 187 (713)
|++.+|+ ..+++... +.+|.+|+++ .+.||+++...+. |.++.
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G---~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~ 228 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYG---HRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL 228 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEEC---CSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC
T ss_pred EEcCCCCCCCCCCCCCCcEEEEc---cCCcceEEEeCCCCCEEEEecCCCCCcEEEEec
Confidence 9999997 44555443 7789999998 4789999987654 44444
No 82
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=5.8e-11 Score=124.54 Aligned_cols=181 Identities=11% Similarity=0.089 Sum_probs=122.5
Q ss_pred CCCCCceEEEeccCCeEEEeecCC--CCCCeEEEEecC-CceEEEEEcC-C----CCCcceEEEcCCCCcEEEEcc---C
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGG--RSSNNIMVSTLE-GRKKRTLLNT-G----LNEPYDIALEPLSGRMFWTEL---G 92 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~--~~~~~I~~~~~~-G~~~~~l~~~-~----~~~p~~iavD~~~~~ly~td~---~ 92 (713)
.+..|.+|++|+. ++|||+|.+. ....+|.+++++ |+..+.+... . ...|++|++|+.++++|++|. .
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 4678999999976 7899999720 004789999987 4434444321 1 246899999988899999998 5
Q ss_pred CCCeEEEEecCCCCcEEEEeC--------------C---------------CCCCeeEEEeCCCCeEEEEcCCCCcEEEE
Q psy6570 93 IKPRISGASIDGKNKFNLVDN--------------N---------------IQWPTGITIDYPSQRLYWADPKARTIESI 143 (713)
Q Consensus 93 ~~~~I~~~~~dG~~~~~l~~~--------------~---------------~~~p~glavd~~~~~LY~~d~~~~~I~~~ 143 (713)
.. .|.+++++......++.. . ...|+||+|++++++||+++....+|+++
T Consensus 144 ~~-~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 144 KA-ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GC-EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CC-eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 55 888888864333222211 0 12479999999888999999988899999
Q ss_pred eCC----CC--ce------eEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeec-cccccccEEE
Q psy6570 144 NLN----GK--DR------FVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLAN-NLNRASDVLI 209 (713)
Q Consensus 144 ~~~----g~--~~------~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~i~v 209 (713)
+.+ +. .. ..+. . ...|.+|+++ +++||++++..++|.+++...+....+... .+..|.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g-~---~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYS-E---KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEE-E---CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred EHHHhcCCCCChhhhhcceEecc-c---CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 853 21 11 1111 1 2368888887 679999999999999999722322222222 2455666665
Q ss_pred E
Q psy6570 210 L 210 (713)
Q Consensus 210 ~ 210 (713)
.
T Consensus 299 ~ 299 (343)
T 2qe8_A 299 G 299 (343)
T ss_dssp C
T ss_pred C
Confidence 4
No 83
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.27 E-value=4.3e-10 Score=117.08 Aligned_cols=195 Identities=10% Similarity=0.055 Sum_probs=132.4
Q ss_pred cccCCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC-----CCCcce
Q psy6570 3 SISSGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG-----LNEPYD 76 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~-----~~~p~~ 76 (713)
...++.|..+++.+.+. ..+.....|.+|++++. ++||+++. ..+.|.++++........+..+ ...|.+
T Consensus 60 ~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~-g~lyv~~~---~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 60 VNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD-EKAYVTQI---WDYRIFIINPKTYEITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET-TEEEEEEB---SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCC
T ss_pred EcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC-CeEEEEEC---CCCeEEEEECCCCeEEEEEEcCCccccCCCcce
Confidence 34467888888886442 22466789999999866 59999996 5789999998865544333332 128999
Q ss_pred EEEcCCCCcEEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC----------CcEEEEeC
Q psy6570 77 IALEPLSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA----------RTIESINL 145 (713)
Q Consensus 77 iavD~~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~----------~~I~~~~~ 145 (713)
|+++ +++||+++++ .+ .|.++++........+.. ...|.+|++|+ .++||++.... ++|++++.
T Consensus 136 i~~~--~~~lyv~~~~~~~-~v~viD~~t~~~~~~i~~-g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 136 MVQY--GKYVYVNCWSYQN-RILKIDTETDKVVDELTI-GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp EEEE--TTEEEEEECTTCC-EEEEEETTTTEEEEEEEC-SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred EEEE--CCEEEEEcCCCCC-EEEEEECCCCeEEEEEEc-CCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEEC
Confidence 9994 7899999985 55 899999875443333332 35799999996 57899998764 78999998
Q ss_pred CCCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcce--eeeccccccccEEEE
Q psy6570 146 NGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFN--VLANNLNRASDVLIL 210 (713)
Q Consensus 146 ~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~i~v~ 210 (713)
............. ...|.+|++. +++||+++. .|++++..++.... ++......|.+|++.
T Consensus 211 ~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 211 ETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp TTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred CCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 7544332222211 2368888876 678999875 89999876554321 111113445555543
No 84
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.27 E-value=1.2e-10 Score=120.01 Aligned_cols=199 Identities=16% Similarity=0.198 Sum_probs=135.4
Q ss_pred cccCCceeEEEccCcc-cEEec-----CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEE-EcC----CC
Q psy6570 3 SISSGNVTRVKREMNL-KTVLS-----NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTL-LNT----GL 71 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~-~~~~~-----~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l-~~~----~~ 71 (713)
+...+.|+++++.+.. ..+.. ....|.+|++|+.+++||+++. .+.|.+++++|+.. .+ ... ..
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~----~~~l~~~d~~g~~~-~~~~~~~~~~~~ 116 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM----RLGLLVVQTDGTFE-EIAKKDSEGRRM 116 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET----TTEEEEEETTSCEE-ECCSBCTTSCBC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC----CCCEEEEeCCCCEE-EEEeccCCCccc
Confidence 4566788888865433 33322 3367999999976589999986 34899999985543 33 221 13
Q ss_pred CCcceEEEcCCCCcEEEEccCC--------------CCeEEEEecCCCCcEEEEeCCCCCCeeEEEe----CCCCeEEEE
Q psy6570 72 NEPYDIALEPLSGRMFWTELGI--------------KPRISGASIDGKNKFNLVDNNIQWPTGITID----YPSQRLYWA 133 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~--------------~~~I~~~~~dG~~~~~l~~~~~~~p~glavd----~~~~~LY~~ 133 (713)
..|.+|++|+ ++.||+++... ...|++++.+|+.. .+. ..+..|++|+++ +++++|||+
T Consensus 117 ~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~~-~~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 117 QGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMI-QVD-TAFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp BCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEE-EEE-EEESSEEEEEEEECTTSCEEEEEEE
T ss_pred cCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCEE-Eec-cCCCCcceEEEecccCCCCCEEEEE
Confidence 5699999997 67899998654 13799998885433 332 345679999999 887799999
Q ss_pred cCCCCcEEEEeCC--CCc--eeEEEecCCCC-ccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccE
Q psy6570 134 DPKARTIESINLN--GKD--RFVVYHTEDNG-YKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDV 207 (713)
Q Consensus 134 d~~~~~I~~~~~~--g~~--~~~~~~~~~~~-~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 207 (713)
+...++|++++++ |.. ...+....... ..|.+|+++ +++||+++...+.|.++++.++.....+......+.++
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i 273 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNL 273 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEE
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeE
Confidence 9988999999875 321 12232222112 568888887 57899998888899999987444444443333445555
Q ss_pred EE
Q psy6570 208 LI 209 (713)
Q Consensus 208 ~v 209 (713)
.+
T Consensus 274 ~~ 275 (314)
T 1pjx_A 274 HF 275 (314)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 85
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.25 E-value=5.9e-12 Score=103.23 Aligned_cols=82 Identities=20% Similarity=0.469 Sum_probs=62.1
Q ss_pred CcccCCCCccCCCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCc-ccCCCCCCCCCCCCCCCCCCCCCcEEeecC--C
Q psy6570 495 PKCMCSPGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCE-CAVGDTSCASLANKCTPNYCSNNGTCVLIE--G 571 (713)
Q Consensus 495 ~~C~C~~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~-~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~--g 571 (713)
|.|.|.+||+|..|+...|.. ..|.+..+.|+|.|++||+ .|+ .+ +++|.+++|.++|+|++.. +
T Consensus 2 y~C~C~~g~~g~~c~~~~c~~-~pC~n~~~~y~C~C~~G~~--~C~~~~---------~~~C~~~pC~ngg~C~~~~~~~ 69 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQQHQSWL-RPVLRSNRVEYCWCNSGRA--QCHSVP---------VKSCSEPRCFNGGTCQQALYFS 69 (91)
T ss_dssp CCCCCBCSSSCCBCCSSCEEE-EECSSSSCEEEEECSSSCC--BCCEEC---------EEECSSCCSCTTCEEEEESSSS
T ss_pred eeeECCCCCcCCeECCCcccC-CccccCCCCcEeECCCCCc--ccccCc---------CCcccCCCCCCCCEeecCCCCC
Confidence 455555555555554434422 2466667789999999998 776 23 5689999999999999987 8
Q ss_pred CceeeCCCCCcCCCCCc
Q psy6570 572 KPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 572 ~~~C~C~~G~~G~~C~~ 588 (713)
+|+|.|++||+|..|+.
T Consensus 70 ~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 70 DFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp CEEEECCTTCBSSSCCB
T ss_pred CeEeECCCCCcCCcCCc
Confidence 99999999999999974
No 86
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=4.9e-10 Score=116.50 Aligned_cols=198 Identities=13% Similarity=0.084 Sum_probs=132.8
Q ss_pred CcccCCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC----CCCcceE
Q psy6570 2 ASISSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG----LNEPYDI 77 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~----~~~p~~i 77 (713)
+++..+.|+++++++.....+..-..|.+|++++. +++|++.. ..|.++++++...+.+.... ...|+++
T Consensus 66 ~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~d-g~l~v~~~-----~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i 139 (326)
T 2ghs_A 66 FNILERELHELHLASGRKTVHALPFMGSALAKISD-SKQLIASD-----DGLFLRDTATGVLTLHAELESDLPGNRSNDG 139 (326)
T ss_dssp EEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEET-TEEEEEET-----TEEEEEETTTCCEEEEECSSTTCTTEEEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEECCCcceEEEEeCC-CeEEEEEC-----CCEEEEECCCCcEEEEeeCCCCCCCCCCCCE
Confidence 45667889999988754333333457899999965 67777654 35999998655555444321 2468899
Q ss_pred EEcCCCCcEEEEccCC-----CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC---C-C
Q psy6570 78 ALEPLSGRMFWTELGI-----KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN---G-K 148 (713)
Q Consensus 78 avD~~~~~ly~td~~~-----~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~---g-~ 148 (713)
++|+ +|+||+++.+. ...|++++ +|+.+ .+ ...+..|++|++++++++|||++...++|++++++ | .
T Consensus 140 ~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~-~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~ 215 (326)
T 2ghs_A 140 RMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KL-FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP 215 (326)
T ss_dssp EECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EE-EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB
T ss_pred EECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-Ee-eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc
Confidence 9997 66788887531 24799988 65432 22 23456799999999888999999988999999985 4 2
Q ss_pred --ceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEE
Q psy6570 149 --DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210 (713)
Q Consensus 149 --~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~ 210 (713)
.++++.........|.++.++ +++||++.+..+.|.++++. +.....+......+..+++.
T Consensus 216 ~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 216 TGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp SSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCSBEEEEEEE
T ss_pred ccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECCCCCcEEEEEe
Confidence 223443322223568889887 56899998888899999874 43333333333334444443
No 87
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.24 E-value=1.2e-10 Score=120.71 Aligned_cols=176 Identities=15% Similarity=0.106 Sum_probs=120.2
Q ss_pred cCCceeEEEccCc---ccEE-ecC------CCCCceEEEecc---CCeEEEeecCCCCCCe--EEEEecCCceEEEEEc-
Q psy6570 5 SSGNVTRVKREMN---LKTV-LSN------LHDPRGVAVDWV---GKNLYWTDAGGRSSNN--IMVSTLEGRKKRTLLN- 68 (713)
Q Consensus 5 ~~~~I~~~~~~~~---~~~~-~~~------~~~p~gla~D~~---~~~ly~td~~~~~~~~--I~~~~~~G~~~~~l~~- 68 (713)
..|+|++++++.. .+.+ +.+ .-+|.||.+... +.+||+++... ...+ |++++.+++....+..
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-SSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-TCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-CCCeEEEEEEECCCCEEEEEecc
Confidence 5789999998742 2222 333 248999999652 33799999842 1334 5566666655443322
Q ss_pred --CCCCCcceEEEcCCCCcEEEEccC----------------CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeE
Q psy6570 69 --TGLNEPYDIALEPLSGRMFWTELG----------------IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRL 130 (713)
Q Consensus 69 --~~~~~p~~iavD~~~~~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~L 130 (713)
..+..|+++++|+ .|.+|+++.. ..++|++++.+ ..+++ ..++..|+||++++++++|
T Consensus 160 ~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~-~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 160 RHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVV-AEGFDFANGINISPDGKYV 235 (355)
T ss_dssp CCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEE-EEEESSEEEEEECTTSSEE
T ss_pred ccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEe-ecCCcccCcceECCCCCEE
Confidence 3478999999996 6788777541 23478888763 33333 4578899999999999999
Q ss_pred EEEcCCCCcEEEEeCCCC----ceeEEEecCCCCccceeeeeeC--CeEEEEe-CCCCcEEEEccc
Q psy6570 131 YWADPKARTIESINLNGK----DRFVVYHTEDNGYKPYKLEVFE--DNLYFST-YRTNNILKINKF 189 (713)
Q Consensus 131 Y~~d~~~~~I~~~~~~g~----~~~~~~~~~~~~~~p~~i~~~~--~~ly~td-~~~~~i~~~~~~ 189 (713)
||+|+..++|++++++.. .++++ .. ...|.+++++. ++||++. +...+|.++++.
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~---~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVL-SF---DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEE-EC---SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEE-eC---CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 999999999999998642 22233 22 45799999984 7888865 565566666544
No 88
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.24 E-value=4.9e-10 Score=116.60 Aligned_cols=182 Identities=18% Similarity=0.247 Sum_probs=129.2
Q ss_pred CcccCCceeEEEccCcc-cEEe-cCCCCCceEEEeccCCeEEEeecCCCCC----CeEEEEecCCceEEEEEc--CCCCC
Q psy6570 2 ASISSGNVTRVKREMNL-KTVL-SNLHDPRGVAVDWVGKNLYWTDAGGRSS----NNIMVSTLEGRKKRTLLN--TGLNE 73 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~-~~~~-~~~~~p~gla~D~~~~~ly~td~~~~~~----~~I~~~~~~G~~~~~l~~--~~~~~ 73 (713)
++...+.|+++++++.. +.+. .....|.+|++|+. ++||++.. .. ..|.++++++...+.++. .....
T Consensus 61 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~---~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 61 LDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYL---GDFKSTGGIFAATENGDNLQDIIEDLSTAYC 136 (333)
T ss_dssp EETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEEC---TTSSSCCEEEEECTTSCSCEEEECSSSSCCC
T ss_pred EECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeC---CCCCCCceEEEEeCCCCEEEEEEccCccCCc
Confidence 34556778888877643 2222 34567999999975 67888876 33 689999998876654443 22357
Q ss_pred cceEEEcCCCCcEEEEccCC-----CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC--
Q psy6570 74 PYDIALEPLSGRMFWTELGI-----KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN-- 146 (713)
Q Consensus 74 p~~iavD~~~~~ly~td~~~-----~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-- 146 (713)
|.+|++|+ ++.||+++... ...|++++.++...+.+.. .+..|++|++++++++|||++...++|++++++
T Consensus 137 ~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~ 214 (333)
T 2dg1_A 137 IDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDD 214 (333)
T ss_dssp EEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCC
Confidence 99999997 67899988642 2379999988755555443 456799999998878899999888899999984
Q ss_pred CCceeEE----EecCCCCccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 147 GKDRFVV----YHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 147 g~~~~~~----~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
|.....+ .........|.+|+++ +++||+++...+.|+++++.
T Consensus 215 g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 215 GVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 4433221 1111112468888887 56899998888899999874
No 89
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.22 E-value=8.3e-10 Score=112.86 Aligned_cols=160 Identities=14% Similarity=0.197 Sum_probs=120.0
Q ss_pred cccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCe
Q psy6570 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPR 96 (713)
Q Consensus 17 ~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~ 96 (713)
..+++...+..|+++++|+.++.|||++. ..+.|.++++++. .+.+. .....|.+|++|+ ++.||+++.+.. +
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~---~~~~i~~~~~~~~-~~~~~-~~~~~~~~l~~~~-dg~l~v~~~~~~-~ 91 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDV---RQNRTWAWSDDGQ-LSPEM-HPSHHQNGHCLNK-QGHLIACSHGLR-R 91 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEG---GGTEEEEEETTSC-EEEEE-SSCSSEEEEEECT-TCCEEEEETTTT-E
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeC---CCCEEEEEECCCC-eEEEE-CCCCCcceeeECC-CCcEEEEecCCC-e
Confidence 34566778889999999998878999998 7889999999988 54444 3457899999997 678999987666 8
Q ss_pred EEEEec-CCCCcEEEEe----CCCCCCeeEEEeCCCCeEEEEcC-----------------CCCcEEEEeCCCCceeEEE
Q psy6570 97 ISGASI-DGKNKFNLVD----NNIQWPTGITIDYPSQRLYWADP-----------------KARTIESINLNGKDRFVVY 154 (713)
Q Consensus 97 I~~~~~-dG~~~~~l~~----~~~~~p~glavd~~~~~LY~~d~-----------------~~~~I~~~~~~g~~~~~~~ 154 (713)
|.++++ +|+ .+.++. ..+..|++|++|+ .++||++|. ..+.|++++.+|.. ..+.
T Consensus 92 i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~ 168 (296)
T 3e5z_A 92 LERQREPGGE-WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL-SAPI 168 (296)
T ss_dssp EEEECSTTCC-EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE-EEEE
T ss_pred EEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE-EEee
Confidence 999998 554 333432 1245789999996 678999864 24589999988543 3333
Q ss_pred ecCCCCccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 155 HTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
.. +..|.+|++. +++++|++...+.|++++..
T Consensus 169 ~~---~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 169 RD---RVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CC---CSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred cC---CCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 22 5577888876 34444999988999998875
No 90
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.21 E-value=1.8e-09 Score=106.50 Aligned_cols=181 Identities=12% Similarity=0.142 Sum_probs=125.3
Q ss_pred cCCceeEEEccCcccE-E-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE-E--EEEcCCC-CCc----
Q psy6570 5 SSGNVTRVKREMNLKT-V-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK-R--TLLNTGL-NEP---- 74 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~-~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~-~--~l~~~~~-~~p---- 74 (713)
..++|+++++.+.... + +.+...++||+++. .+.+|+++. ..++|+++.++.... . ......+ ..|
T Consensus 47 ~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E---~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g 122 (255)
T 3qqz_A 47 KPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDE---RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCG 122 (255)
T ss_dssp TTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEET---TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSC
T ss_pred CCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEEC---CCCcEEEEEcCCCCeeeeeeeeccccccccccCC
Confidence 3678889998865422 2 45678999999984 567888887 568888877654331 1 1111122 234
Q ss_pred -ceEEEcCCCCcEEEEccCCCCeEEEEe--cCCCCcEEEEe------CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeC
Q psy6570 75 -YDIALEPLSGRMFWTELGIKPRISGAS--IDGKNKFNLVD------NNIQWPTGITIDYPSQRLYWADPKARTIESINL 145 (713)
Q Consensus 75 -~~iavD~~~~~ly~td~~~~~~I~~~~--~dG~~~~~l~~------~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~ 145 (713)
.|||+|+.+++||++.......|++.+ +.+...+++.. ..+..+.+|++|+.+++||+.....+.|..++.
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 899999998899998755433778776 22222233211 135678999999999999999999999999999
Q ss_pred CCCceeEEEecC------CCCccceeeeee-CCeEEEEeCCCCcEEEEcccC
Q psy6570 146 NGKDRFVVYHTE------DNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 146 ~g~~~~~~~~~~------~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~ 190 (713)
+|..+..+.-.. ..+++|.||+++ +++||++. ..+.++++.+..
T Consensus 203 ~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~~~~ 253 (255)
T 3qqz_A 203 VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFTPQS 253 (255)
T ss_dssp TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEEC--
T ss_pred CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEEecC
Confidence 998554443221 125789999998 67899995 446889987753
No 91
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.20 E-value=7.2e-10 Score=114.02 Aligned_cols=162 Identities=19% Similarity=0.239 Sum_probs=120.4
Q ss_pred cccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCe
Q psy6570 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPR 96 (713)
Q Consensus 17 ~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~ 96 (713)
..+.+..+...++|+++++.++.|||++. ..++|++++++|+.. ++. .....|.+|++|+ +|+||+++.+.. +
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~---~~~~i~~~~~~g~~~-~~~-~~~~~~~gl~~d~-dG~l~v~~~~~~-~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDL---VGRRVLGWREDGTVD-VLL-DATAFTNGNAVDA-QQRLVHCEHGRR-A 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEET---TTTEEEEEETTSCEE-EEE-ESCSCEEEEEECT-TSCEEEEETTTT-E
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEEC---CCCEEEEEeCCCCEE-EEe-CCCCccceeeECC-CCCEEEEECCCC-E
Confidence 44667888999999999998888999998 788999999987643 333 2346799999997 678999987766 8
Q ss_pred EEEEecCCCCcEEEEe----CCCCCCeeEEEeCCCCeEEEEcC-----------------CCCcEEEEeCCCCceeEEEe
Q psy6570 97 ISGASIDGKNKFNLVD----NNIQWPTGITIDYPSQRLYWADP-----------------KARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 97 I~~~~~dG~~~~~l~~----~~~~~p~glavd~~~~~LY~~d~-----------------~~~~I~~~~~~g~~~~~~~~ 155 (713)
|.+++.+|+. +++.. ..+..|+.|++|+ .++||++|+ ....|++++.++...+.+.
T Consensus 109 v~~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 109 ITRSDADGQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEECTTSCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEECCCCCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 9999998653 33432 1256799999995 678999874 1357999998544444443
Q ss_pred cCCCCccceeeeee--CCeEEEEeCCC-----CcEEEEcccCC
Q psy6570 156 TEDNGYKPYKLEVF--EDNLYFSTYRT-----NNILKINKFGN 191 (713)
Q Consensus 156 ~~~~~~~p~~i~~~--~~~ly~td~~~-----~~i~~~~~~~~ 191 (713)
. +..|.+|++. +..|||++... +.|++++..+.
T Consensus 186 ~---~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 186 D---LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp E---ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred c---CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 2 4567777775 45799999863 78888876543
No 92
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.19 E-value=4.2e-12 Score=110.07 Aligned_cols=101 Identities=25% Similarity=0.622 Sum_probs=78.0
Q ss_pred CCCCCCCCCCCcEEcCC-CCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEeecCCCceeeCCCCCc--
Q psy6570 506 KKCDTCTCLNGGTCIPN-SKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYS-- 582 (713)
Q Consensus 506 ~~C~~~~C~~~g~C~~~-~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~-- 582 (713)
++|...||.+ +|+++ .++|+|.|++||+|..++.. .|. ++|...+|. ++|++ .++|+|.|++||+
T Consensus 5 deC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~----~C~---~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~ 72 (118)
T 1dx5_I 5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPH----RCQ---MFCNQTACP--ADCDP-NTQASCECPEGYILD 72 (118)
T ss_dssp CGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEE----EEE---ECCCSSEEE--CEECT-TSTTCEECCTTEEEE
T ss_pred ccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCC----ccc---cccCCCCCC--CcccC-CCCeEeECCCCccCC
Confidence 3455668874 99999 88999999999998865321 011 134445554 68988 5899999999999
Q ss_pred -CCCCCcCCCCCCC-C-CCCCCCCeEecCCCCcceeecCCCcccC
Q psy6570 583 -GKQCTEREDSPSC-H-NYCDNAGLCSYSKQGKPVCTCVNGWSGI 624 (713)
Q Consensus 583 -G~~C~~~~~~~~C-~-~~C~~~g~C~~~~~g~~~C~C~~G~~G~ 624 (713)
|..|+++ ++| . ++| +++|++.. ++|+|.|++||+|.
T Consensus 73 ~g~~C~di---deC~~~~~C--~~~C~n~~-g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 73 DGFICTDI---DECENGGFC--SGVCHNLP-GTFECICGPDSALA 111 (118)
T ss_dssp TTTEEEEC---CHHHHCSSC--SSEEEECS-SSEEEEECSSSSCE
T ss_pred CCCccccc---cccCCCCCC--cCeEEeCC-CCEEEECCCCCccC
Confidence 8899765 888 3 789 68999886 99999999999864
No 93
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=4e-10 Score=118.13 Aligned_cols=173 Identities=16% Similarity=0.157 Sum_probs=118.5
Q ss_pred CCceeEEEccCcc--cEE-ec-----CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEEc--------
Q psy6570 6 SGNVTRVKREMNL--KTV-LS-----NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLLN-------- 68 (713)
Q Consensus 6 ~~~I~~~~~~~~~--~~~-~~-----~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~~-------- 68 (713)
.++|.++++.+.. +++ +. ....|.+|++|+.++.+|++|.+....+.|.+++++ |+..+++..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 4788888887533 222 11 123579999998888999999722125688899986 443333211
Q ss_pred -----CC---------------CCCcceEEEcCCCCcEEEEccCCCCeEEEEecC----CCC-------cEEEEeCCCCC
Q psy6570 69 -----TG---------------LNEPYDIALEPLSGRMFWTELGIKPRISGASID----GKN-------KFNLVDNNIQW 117 (713)
Q Consensus 69 -----~~---------------~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d----G~~-------~~~l~~~~~~~ 117 (713)
.+ ...|++|+++|..+.||+++.... +|++++.+ +.. ..... .....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~ 249 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERY-SEKPI 249 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEec-ccCCC
Confidence 00 134789999998888999998776 89998753 211 00111 12347
Q ss_pred CeeEEEeCCCCeEEEEcCCCCcEEEEeC-CCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcE
Q psy6570 118 PTGITIDYPSQRLYWADPKARTIESINL-NGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNI 183 (713)
Q Consensus 118 p~glavd~~~~~LY~~d~~~~~I~~~~~-~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i 183 (713)
|.||++|+ +++||+++...++|.+++. +|.. ..+.... .+..|.++++. +++||+++...+++
T Consensus 250 pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~-~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 250 CDGISIDK-DHNIYVGDLAHSAIGVITSADRAY-KLLVTDE-KLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CSCEEECT-TCCEEEEEGGGTEEEEEETTTTEE-EEEEECG-GGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CceEEECC-CCCEEEEccCCCeEEEEECCCCCE-EEEEECC-ceecCCeeEECCCCcEEEEeCccccc
Confidence 99999996 5899999999999999999 7753 3343322 36689999986 67899998765544
No 94
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.17 E-value=2.3e-10 Score=120.15 Aligned_cols=157 Identities=11% Similarity=0.103 Sum_probs=114.1
Q ss_pred cccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEE------cCCCCCcceEEEcCC---CCcEE
Q psy6570 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------NTGLNEPYDIALEPL---SGRMF 87 (713)
Q Consensus 17 ~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~------~~~~~~p~~iavD~~---~~~ly 87 (713)
..+++++.+..|.+|++++.+++||+++. .++|.+++.+|+..+.+. ..+...|.+|+++|. +++||
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V~e~----~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLITLR----GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIW 84 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEEEET----TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEE
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEEEeC----CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEE
Confidence 45667788999999999986444999997 479999998876432221 123456889999986 89999
Q ss_pred EEccCC------CCeEEEEecCCC-----CcEEEEeC------CCCCCeeEEEeCCCCeEEEEcCC-------------C
Q psy6570 88 WTELGI------KPRISGASIDGK-----NKFNLVDN------NIQWPTGITIDYPSQRLYWADPK-------------A 137 (713)
Q Consensus 88 ~td~~~------~~~I~~~~~dG~-----~~~~l~~~------~~~~p~glavd~~~~~LY~~d~~-------------~ 137 (713)
+++... ..+|.|+++++. ..++++.. ..+.+.+|++++ +++||++... .
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~ 163 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQ 163 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCT
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCC
Confidence 997541 237999888754 23444431 345689999997 5699999632 3
Q ss_pred CcEEEEeCCCC-------------ceeEEEecCCCCccceeeeee--CCeEEEEeCCCC
Q psy6570 138 RTIESINLNGK-------------DRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTN 181 (713)
Q Consensus 138 ~~I~~~~~~g~-------------~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~ 181 (713)
++|+|++.+|+ ..+++... +.+|.+|+++ .+.||++|....
T Consensus 164 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G---~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 164 GKLVRLTDQGEIPDDNPFIKESGVRAEIWSYG---IRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp TEEEEEETTSCCCTTCTTTTSTTSCTTEEEEC---CSEEEEEEEETTTTEEEEEEECSB
T ss_pred eEEEEECCCCCCCCCCCCcCCCCCCccEEEEc---CcCccceEEECCCCCEEEEecCCC
Confidence 58999999986 34444443 7789999998 479999997643
No 95
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=4.5e-09 Score=109.81 Aligned_cols=188 Identities=11% Similarity=0.179 Sum_probs=132.4
Q ss_pred CCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE-EEEEcCCCC--------Ccc
Q psy6570 6 SGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK-RTLLNTGLN--------EPY 75 (713)
Q Consensus 6 ~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~-~~l~~~~~~--------~p~ 75 (713)
.++|+.+++.+... ..+.....|.++++++.++.||+++. ..+.|.+++++.... ..+...... .|.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNT---VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEET---TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEec---CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc
Confidence 56788888776432 22444567999999999888999998 678999999875443 333322111 278
Q ss_pred eEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEe
Q psy6570 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 76 ~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~ 155 (713)
+|+++|..++||+++.+...+|++.+++.......+......|.++++++++++||+++. .+.|+.+++..........
T Consensus 145 ~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 145 ELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKK 223 (353)
T ss_dssp EEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEE
T ss_pred eEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEE
Confidence 999999888999999654448999998765544444323456999999999999999986 6789999986554433322
Q ss_pred c-CC-CCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 156 T-ED-NGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 156 ~-~~-~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
. .. ....+.++++. +++||+++...+.|+.++...+.....+
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 2 11 12345556664 6689999988899999988666544443
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=4.1e-09 Score=110.13 Aligned_cols=187 Identities=13% Similarity=0.148 Sum_probs=131.0
Q ss_pred cccCCceeEEEccCcccEE-ecC--CC--------CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCC
Q psy6570 3 SISSGNVTRVKREMNLKTV-LSN--LH--------DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGL 71 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~~~~-~~~--~~--------~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~ 71 (713)
+...+.|..+++.+...+. +.. .. .|.++++++.++.||+++.+ ..+.|.+++++.......+....
T Consensus 107 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~ 184 (353)
T 3vgz_A 107 NTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--KESVIWVVDGGNIKLKTAIQNTG 184 (353)
T ss_dssp ETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--SSCEEEEEETTTTEEEEEECCCC
T ss_pred ecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--CCceEEEEcCCCCceEEEecCCC
Confidence 3445778888877643221 111 11 27889999999999999852 46789999998666555554233
Q ss_pred CCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeC----CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 72 NEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDN----NIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~----~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
..|.+|+++|..++||+++.. . .|.+.++........+.. ....|.+|++++.+++||+++...+.|+.+++..
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~-~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNAD-G-ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTT-S-EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred CccceEEECCCCCEEEEEcCC-C-eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 569999999988889999863 3 788888765544433332 2445778999999999999999889999999865
Q ss_pred CceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 148 KDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 148 ~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
......... ..|.++++. +++||+++...+.|..++...+.....+
T Consensus 263 ~~~~~~~~~----~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 263 GNILAKVAA----PESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp CCEEEEEEC----SSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEc----CCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 443332222 234556654 5679999988899999987665544443
No 97
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.15 E-value=1.2e-09 Score=112.81 Aligned_cols=160 Identities=19% Similarity=0.133 Sum_probs=116.9
Q ss_pred cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEE------cCCCCCcceEEEcCC---CCcEEEE
Q psy6570 19 KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL------NTGLNEPYDIALEPL---SGRMFWT 89 (713)
Q Consensus 19 ~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~------~~~~~~p~~iavD~~---~~~ly~t 89 (713)
++++.+|..|++|++++. +.||+++. ..++|.+++.++.....+. ..+...|.+||++|. +++||++
T Consensus 25 ~~va~gL~~P~~ia~~pd-G~llVter---~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG-GDLLVSSR---DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEET---TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred EEeecCCCCceEEEEcCC-CcEEEEEe---cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 566889999999999976 67999997 6789999987643333332 123567899999984 7899986
Q ss_pred cc--CCCCeEEEEecCCC--------CcEEEEe----CCCCCCeeEEEeCCCCeEEEEc-------------CCCCcEEE
Q psy6570 90 EL--GIKPRISGASIDGK--------NKFNLVD----NNIQWPTGITIDYPSQRLYWAD-------------PKARTIES 142 (713)
Q Consensus 90 d~--~~~~~I~~~~~dG~--------~~~~l~~----~~~~~p~glavd~~~~~LY~~d-------------~~~~~I~~ 142 (713)
.. ..+ +|.|+.+++. ..++|+. ...+.+..|++++ .++||++. ...++|+|
T Consensus 101 yt~~~~~-~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 101 FTSASDN-RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EECSSSE-EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EecCCCC-EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence 43 334 8999988872 2344443 2356778899996 56899994 23578999
Q ss_pred EeCCCC--------ceeEEEecCCCCccceeeeee-CCeEEEEeCCCC---cEEEEc
Q psy6570 143 INLNGK--------DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTN---NILKIN 187 (713)
Q Consensus 143 ~~~~g~--------~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~---~i~~~~ 187 (713)
++.+|+ ..+++... +++|.+|+++ .+.||+++.+.. +|.++.
T Consensus 179 i~~dG~ip~~nPf~~~~i~a~G---~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVYSYG---HRNVQGLAWDDKQRLFASEFGQDTWDELNAIK 232 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEEEBC---CSBCCEEEECTTCCEEEEECCSSSCEEEEEEC
T ss_pred EeCCCCccCCCCCCCCeEEeeC---CCCcceEEECCCCCEEEEecCCCCCceeeEEc
Confidence 999997 44555443 7899999988 578999997653 355543
No 98
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.15 E-value=2.8e-11 Score=99.20 Aligned_cols=83 Identities=17% Similarity=0.344 Sum_probs=61.0
Q ss_pred CCccccCCCCccCCCCCCCC-CCCCCCCeeecCCCCCCeeecCCCcccCCcc---ccCCCCCCCCCCceeeCCCCCCCCC
Q psy6570 293 EELNVTSGKMSCKVAPARTC-YLDCNHGTCEFDDDFDPHCICQENFYGTYCE---KVNNSMCPCLNQGMCYPDLTHPEPT 368 (713)
Q Consensus 293 ~~~c~C~~g~~~~~~~~~~C-~~~C~~~~C~~~~~~~~~C~C~~g~~G~~C~---~~~c~~~~C~~~~~C~~~~~~~~~~ 368 (713)
+|.|.|.+||.|..+++++| .++|.++ .+.|.|.|++||. .|+ ...|...||+++|.|++... .++
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~------~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~--~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRS------NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALY--FSD 70 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSS------SCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESS--SSC
T ss_pred CeeeECCCCCcCCeECCCcccCCccccC------CCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCC--CCC
Confidence 36788888888888888877 4556543 2347899999997 786 23388888988888987541 136
Q ss_pred ceeeCCCCcccCCCCcc
Q psy6570 369 YKCHCAPSYTGARCESR 385 (713)
Q Consensus 369 ~~C~C~~G~~g~~C~~~ 385 (713)
|+|.|++||+|..|+..
T Consensus 71 ~~C~C~~G~~G~~Ce~~ 87 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCEID 87 (91)
T ss_dssp EEEECCTTCBSSSCCBC
T ss_pred eEeECCCCCcCCcCCcC
Confidence 88999999998888754
No 99
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.14 E-value=2.5e-09 Score=108.13 Aligned_cols=189 Identities=13% Similarity=0.058 Sum_probs=125.8
Q ss_pred CCcccCCceeEEEccCcc-cEE-ecCCC-------CCceEEE---eccCCeEEE-eecCC---------CCCCeEEEEec
Q psy6570 1 MASISSGNVTRVKREMNL-KTV-LSNLH-------DPRGVAV---DWVGKNLYW-TDAGG---------RSSNNIMVSTL 58 (713)
Q Consensus 1 vad~~~~~I~~~~~~~~~-~~~-~~~~~-------~p~gla~---D~~~~~ly~-td~~~---------~~~~~I~~~~~ 58 (713)
|++...++|.++++.+.. +.+ +..+. .|.||.+ |+. ++|++ ++.+. +....|.++++
T Consensus 29 vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl 107 (334)
T 2p9w_A 29 QSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNL 107 (334)
T ss_dssp EEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEES
T ss_pred EEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccccccccCCCCEEEEEcC
Confidence 356778999999998543 222 33322 4689999 776 78887 55211 12467999999
Q ss_pred C----CceEEEEEcC------------CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeC-----CCCC
Q psy6570 59 E----GRKKRTLLNT------------GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDN-----NIQW 117 (713)
Q Consensus 59 ~----G~~~~~l~~~------------~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-----~~~~ 117 (713)
+ |+.+..+-.. ....+++|++|+ .|++|+++....+.|+|++.||+....+... ....
T Consensus 108 ~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G 186 (334)
T 2p9w_A 108 PLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPG 186 (334)
T ss_dssp SCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCS
T ss_pred CcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccC
Confidence 9 5544333211 123488999995 7999999987623999999999965555421 1234
Q ss_pred CeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec--C--CCCccceee-ee-eCCeE-EEEeCCCCcEEEEcccC
Q psy6570 118 PTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT--E--DNGYKPYKL-EV-FEDNL-YFSTYRTNNILKINKFG 190 (713)
Q Consensus 118 p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~--~--~~~~~p~~i-~~-~~~~l-y~td~~~~~i~~~~~~~ 190 (713)
++||++++.+..|++++. .++|++++++...+..+... . ..+..|.+| .+ .++.+ ++++...+.+...++++
T Consensus 187 ~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred cceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 789999999999999999 99999999984332112211 1 135567775 44 35655 88887666555555555
Q ss_pred CC
Q psy6570 191 NS 192 (713)
Q Consensus 191 ~~ 192 (713)
-.
T Consensus 266 W~ 267 (334)
T 2p9w_A 266 WK 267 (334)
T ss_dssp TS
T ss_pred cc
Confidence 33
No 100
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.13 E-value=1.7e-12 Score=117.73 Aligned_cols=128 Identities=26% Similarity=0.527 Sum_probs=81.3
Q ss_pred cCCCCCCCCCcEeccCCCCccccCCCCCcCCCCccCCCCCCCCCCeeecCCCCCeecCCCCccCCCCCCc--cccCCCCC
Q psy6570 417 QCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQYSQCKNYCVNGECSITDSGPKCMCSPGYSGKKCDTC--TCLNGDSG 494 (713)
Q Consensus 417 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~--~C~~~~~~ 494 (713)
+|++.||.+ ++|+++.++|+|.|++||+|..+. ..|.+.. ...|.++|.|..|+.. .|.. .
T Consensus 6 eC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~----------~~C~~~~---~~~C~~~~~g~~C~~~~~~c~~---~ 68 (147)
T 2w86_A 6 ECESSPCIN-GVCKNSPGSFICECSSESTLDPTK----------TICIETI---KGTCWQTVIDGRCEININGATL---K 68 (147)
T ss_dssp GGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS----------SBEEECC---CEEEEEEEETTEEEEEEEEEEC---H
T ss_pred cCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC----------CeecCCC---CCcccCCCCCCccccCCCcccc---C
Confidence 677778875 688888888888888888876543 2344332 2355566666655421 1100 0
Q ss_pred CcccCC-CCccCCCCCCCCCCCCcEEcCCCCCeeccCCCCCC---CCCCcccCCCCCCCCCCCCCCCC--CCCCCcEEee
Q psy6570 495 PKCMCS-PGYSGKKCDTCTCLNGGTCIPNSKNNVCKCPSQYT---GRRCECAVGDTSCASLANKCTPN--YCSNNGTCVL 568 (713)
Q Consensus 495 ~~C~C~-~G~~g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~---G~~C~~~~~~~~c~~~~~~C~~~--~C~~~~~C~~ 568 (713)
..|... .++.|..|. .| .|.|.|++||+ |..|+ + +++|..+ +|.+ ++|++
T Consensus 69 ~~C~~~~g~~~g~~C~--------~c-----~~~C~C~~Gy~~~~g~~C~-d---------ideC~~~~~~C~~-g~C~n 124 (147)
T 2w86_A 69 SQCCSSLGAAWGSPCT--------LC-----QVDPICGKGYSRIKGTQCE-D---------IDECEVFPGVCKN-GLCVN 124 (147)
T ss_dssp HHHHTTTCSEETTTTE--------EC-----CCCTTTCTTEEEEETTEEE-E---------CCHHHHSTTCSSS-SEEEE
T ss_pred CccccCcCcccCCCcc--------cC-----CCcccCCCccccCCCCccC-c---------cccccCCCCCCCC-CEEEC
Confidence 011111 111222221 12 37899999995 88887 3 6788744 5974 69999
Q ss_pred cCCCceeeCCCCCcCCC
Q psy6570 569 IEGKPSCKCLPPYSGKQ 585 (713)
Q Consensus 569 ~~g~~~C~C~~G~~G~~ 585 (713)
+.|+|+|.|++||+|..
T Consensus 125 ~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 125 TRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp ETTEEEEECCTTCCBCT
T ss_pred CCCCEEeeCCCCCccCC
Confidence 99999999999999754
No 101
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.09 E-value=1.8e-08 Score=99.27 Aligned_cols=182 Identities=12% Similarity=0.110 Sum_probs=128.3
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
..+.||++|+.+++||.+.. ...+|++++++|+..+.+...+...+.||++++ ++.+|+++.+.+ +|+++.++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d---~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~-~l~~~~v~~~ 101 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN---KPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDY-AIYVISLTPN 101 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE---TTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTT-EEEEEEECTT
T ss_pred cCcceeEEeCCCCEEEEEEC---CCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCC-cEEEEEcCCC
Confidence 67999999998899998666 578999999999887777556678899999994 667778877766 8988877655
Q ss_pred Cc-EEE--EeCCC-CCC-----eeEEEeCCCCeEEEEcCCCC-cEEEEe--CCCCceeEEEe----cCCCCccceeeeee
Q psy6570 106 NK-FNL--VDNNI-QWP-----TGITIDYPSQRLYWADPKAR-TIESIN--LNGKDRFVVYH----TEDNGYKPYKLEVF 169 (713)
Q Consensus 106 ~~-~~l--~~~~~-~~p-----~glavd~~~~~LY~~d~~~~-~I~~~~--~~g~~~~~~~~----~~~~~~~p~~i~~~ 169 (713)
.. ..+ +...+ ..| .|||+|+.+++||++..... .|+.++ +.+...+++.. ....+..+.+|+++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 43 111 11122 234 89999999999999976554 788887 22233344321 12235567888887
Q ss_pred --CCeEEEEeCCCCcEEEEcccCCCcceeeecc---------ccccccEEEEeec
Q psy6570 170 --EDNLYFSTYRTNNILKINKFGNSDFNVLANN---------LNRASDVLILQEN 213 (713)
Q Consensus 170 --~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~i~v~~~~ 213 (713)
.++||+....++.+..++..+. .+..+... +..|.+|++....
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred CCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 5689999989999999997654 33333221 3567787776543
No 102
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.09 E-value=1.4e-09 Score=114.19 Aligned_cols=184 Identities=11% Similarity=0.165 Sum_probs=121.6
Q ss_pred CCceeEEEccCcccE-E-------ecCCCCCceEEEecc---CCeEEEeecCCCC----CCeEEEEecCCc-----eEEE
Q psy6570 6 SGNVTRVKREMNLKT-V-------LSNLHDPRGVAVDWV---GKNLYWTDAGGRS----SNNIMVSTLEGR-----KKRT 65 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~-~-------~~~~~~p~gla~D~~---~~~ly~td~~~~~----~~~I~~~~~~G~-----~~~~ 65 (713)
.++|++++.++.... + ......|.+|++++. ++.||+++..... ..+|.++++++. ..++
T Consensus 38 ~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~ 117 (353)
T 2g8s_A 38 GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRT 117 (353)
T ss_dssp TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEE
T ss_pred CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEE
Confidence 478888887664321 1 223456789999985 7999999862100 457999888653 2344
Q ss_pred EEcC------CCCCcceEEEcCCCCcEEEEccCC------------CCeEEEEecCCCC------------cEEEEeCCC
Q psy6570 66 LLNT------GLNEPYDIALEPLSGRMFWTELGI------------KPRISGASIDGKN------------KFNLVDNNI 115 (713)
Q Consensus 66 l~~~------~~~~p~~iavD~~~~~ly~td~~~------------~~~I~~~~~dG~~------------~~~l~~~~~ 115 (713)
++.. ....+.+|+++| +|+||++.... .++|+|++.||+. ...++...+
T Consensus 118 i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~ 196 (353)
T 2g8s_A 118 VFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI 196 (353)
T ss_dssp EEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC
T ss_pred EEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC
Confidence 4421 234588999997 67999996321 2489999999972 233445588
Q ss_pred CCCeeEEEeCCCCeEEEEcCCCC---cEEEEeCCCCc---------------------------eeEEEecCCCCcccee
Q psy6570 116 QWPTGITIDYPSQRLYWADPKAR---TIESINLNGKD---------------------------RFVVYHTEDNGYKPYK 165 (713)
Q Consensus 116 ~~p~glavd~~~~~LY~~d~~~~---~I~~~~~~g~~---------------------------~~~~~~~~~~~~~p~~ 165 (713)
..|.+|++|+.+++||++|.... +|.++...+.. ...+.... ....|.+
T Consensus 197 rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G 275 (353)
T 2g8s_A 197 RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSG 275 (353)
T ss_dssp SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEE
T ss_pred cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcce
Confidence 89999999987899999997643 45444321110 00000000 1235778
Q ss_pred eeee--------CCeEEEEeCCCCcEEEEcccCC
Q psy6570 166 LEVF--------EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 166 i~~~--------~~~ly~td~~~~~i~~~~~~~~ 191 (713)
++++ .+.||++++..++|++++..++
T Consensus 276 ~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 276 MAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp EEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred eEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 8885 4789999999999999998754
No 103
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.09 E-value=5.7e-09 Score=107.71 Aligned_cols=205 Identities=16% Similarity=0.179 Sum_probs=134.0
Q ss_pred cccCCceeEEEccC-cccEE-------ecCCCCCceEEEec---cCCeEEEeecCCCCCCeEEEEecCCc--------eE
Q psy6570 3 SISSGNVTRVKREM-NLKTV-------LSNLHDPRGVAVDW---VGKNLYWTDAGGRSSNNIMVSTLEGR--------KK 63 (713)
Q Consensus 3 d~~~~~I~~~~~~~-~~~~~-------~~~~~~p~gla~D~---~~~~ly~td~~~~~~~~I~~~~~~G~--------~~ 63 (713)
+...++|++++.++ ....+ ..+...|.|||+++ .++.||++.... ..++|.++.+++. ..
T Consensus 49 er~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~~v~R~~~~~~~~~~~~~~~~ 127 (347)
T 3das_A 49 SRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDNRIVRMLYDEKKPSGEQLGAP 127 (347)
T ss_dssp ETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSEEEEEEEBCTTSCTTCCBCCC
T ss_pred EecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCCEEEEEEeCCCCcccccCCCc
Confidence 33478888888654 22222 23566789999998 378999975421 3578999988762 13
Q ss_pred EEEEc----CCCCCcceEEEcCCCCcEEEEcc------------CCCCeEEEEecCCC--------CcEEEEeCCCCCCe
Q psy6570 64 RTLLN----TGLNEPYDIALEPLSGRMFWTEL------------GIKPRISGASIDGK--------NKFNLVDNNIQWPT 119 (713)
Q Consensus 64 ~~l~~----~~~~~p~~iavD~~~~~ly~td~------------~~~~~I~~~~~dG~--------~~~~l~~~~~~~p~ 119 (713)
++|+. ........|++++ +|+||++.- ...++|+|++.||+ .. .++...+..|.
T Consensus 128 ~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~-~i~a~G~RNp~ 205 (347)
T 3das_A 128 DTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGS-PVYSYGHRNVQ 205 (347)
T ss_dssp EEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTC-CEEEBCCSBCC
T ss_pred EEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCC-eEEeeCCCCcc
Confidence 34432 2245677899997 689999942 12358999999998 33 35566899999
Q ss_pred eEEEeCCCCeEEEEcCCCC---cEEEEeCCCCce---------------eEEEecCCCCccceeeeeeCCeEEEEeCCCC
Q psy6570 120 GITIDYPSQRLYWADPKAR---TIESINLNGKDR---------------FVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN 181 (713)
Q Consensus 120 glavd~~~~~LY~~d~~~~---~I~~~~~~g~~~---------------~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~ 181 (713)
||++|+ .+.||++|.... .|.++. .|.+- ..+.........|.||++.++.+|++.....
T Consensus 206 Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~ 283 (347)
T 3das_A 206 GLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGE 283 (347)
T ss_dssp EEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTC
T ss_pred eEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCC
Confidence 999998 699999997553 455544 22210 0011110011368899999999999999999
Q ss_pred cEEEEcccCCCc---ceeeec-cccccccEEEEee
Q psy6570 182 NILKINKFGNSD---FNVLAN-NLNRASDVLILQE 212 (713)
Q Consensus 182 ~i~~~~~~~~~~---~~~~~~-~~~~~~~i~v~~~ 212 (713)
+|+++...+... .+.+.. ...++.+|.+...
T Consensus 284 ~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD 318 (347)
T 3das_A 284 RLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG 318 (347)
T ss_dssp SEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET
T ss_pred EEEEEEecCCceecceEEeecCCCCCccEEEECCC
Confidence 999998765432 122222 2345666665543
No 104
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.08 E-value=7.9e-09 Score=104.44 Aligned_cols=161 Identities=11% Similarity=0.048 Sum_probs=116.1
Q ss_pred ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCC-------CCcceEEE---cCCCCcEEE-Ec
Q psy6570 22 LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGL-------NEPYDIAL---EPLSGRMFW-TE 90 (713)
Q Consensus 22 ~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~-------~~p~~iav---D~~~~~ly~-td 90 (713)
....-.|+++++|..++++|+++. ..++|.++++++...+.+...++ .+|.||.+ |+. ++|++ ++
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l---~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~ 84 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNL---YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMK 84 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEET---TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEE
T ss_pred cCcccCCcCccCcCCCCEEEEEec---cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEc
Confidence 345567999999999999999998 78999999998654444332332 25789999 786 77777 55
Q ss_pred c------------CCCCeEEEEecC----CCCcEEEEeC------------CCCCCeeEEEeCCCCeEEEEcCCC-CcEE
Q psy6570 91 L------------GIKPRISGASID----GKNKFNLVDN------------NIQWPTGITIDYPSQRLYWADPKA-RTIE 141 (713)
Q Consensus 91 ~------------~~~~~I~~~~~d----G~~~~~l~~~------------~~~~p~glavd~~~~~LY~~d~~~-~~I~ 141 (713)
. +.. .|.+++++ |+....+-.. ....+++|++| ..+++|+++... +.|+
T Consensus 85 ~~~af~~~g~~~~g~~-~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD-~~GnaYVt~s~~~~~I~ 162 (334)
T 2p9w_A 85 NAKSFNFADQSSHGAS-SFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD-RDGNSYVAFALGMPAIA 162 (334)
T ss_dssp ETTTTCTTSCCSSSCC-EEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC-TTSCEEEEEEESSCEEE
T ss_pred ccccccccccccCCCC-EEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC-CCCCEEEeCCCCCCeEE
Confidence 2 123 79999999 4444333211 22358999999 579999999888 9999
Q ss_pred EEeCCCCceeEEEecC---CCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 142 SINLNGKDRFVVYHTE---DNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 142 ~~~~~g~~~~~~~~~~---~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+++.||+....+.... .....+.||++. +..|++++. .+++++++..
T Consensus 163 rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 163 RVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp EECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred EEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 9999999666554321 122346688887 446777776 9999999976
No 105
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=3.1e-09 Score=108.77 Aligned_cols=154 Identities=10% Similarity=0.035 Sum_probs=115.3
Q ss_pred EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEE
Q psy6570 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGA 100 (713)
Q Consensus 21 ~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~ 100 (713)
+.....-++|+++|+.++.|||+|. ..++|+++++++...+.+. .. ..|.+|++++ ++.||++.. . .|+++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~---~~~~i~~~d~~~~~~~~~~-~~-~~~~~i~~~~-dG~l~v~~~--~-~l~~~ 78 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDI---PAKKVCRWDSFTKQVQRVT-MD-APVSSVALRQ-SGGYVATIG--T-KFCAL 78 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEET---TTTEEEEEETTTCCEEEEE-CS-SCEEEEEEBT-TSSEEEEET--T-EEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEEC---CCCEEEEEECCCCcEEEEe-CC-CceEEEEECC-CCCEEEEEC--C-eEEEE
Confidence 3456778999999998999999999 7899999999886655443 22 6799999997 556877762 3 89999
Q ss_pred ecCCCCcEEEEeC----CCCCCeeEEEeCCCCeEEEEcC-----------CCCcEEEEeCCCCceeEEEecCCCCcccee
Q psy6570 101 SIDGKNKFNLVDN----NIQWPTGITIDYPSQRLYWADP-----------KARTIESINLNGKDRFVVYHTEDNGYKPYK 165 (713)
Q Consensus 101 ~~dG~~~~~l~~~----~~~~p~glavd~~~~~LY~~d~-----------~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~ 165 (713)
++++...+.+... ....|++|++|+ .++||+++. ..++|++++.+|.... +... +..|.+
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~---~~~png 153 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQ---VDISNG 153 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEE---ESBEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Eeec---cccccc
Confidence 9886655555542 234689999996 567999873 3457999998875443 3332 456778
Q ss_pred eeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 166 LEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 166 i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
|++. +..|||++...++|++++.
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred eEEcCCCCEEEEecCCCCcEEEEec
Confidence 8775 5579999999999999875
No 106
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.06 E-value=3e-09 Score=115.16 Aligned_cols=157 Identities=17% Similarity=0.207 Sum_probs=112.4
Q ss_pred cccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEE-cCC------CCCcceEEEcCC---CCc
Q psy6570 17 NLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLL-NTG------LNEPYDIALEPL---SGR 85 (713)
Q Consensus 17 ~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~-~~~------~~~p~~iavD~~---~~~ 85 (713)
..++++.+|..|.+|++++. ++||+++. ..++|++++.+ |....++. ... ...+.+||++|. ++.
T Consensus 18 ~~~~~a~~l~~P~~~a~~pd-G~l~V~e~---~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPD-NQIWLTER---ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp CEEEEECCCSSEEEEEECTT-SCEEEEET---TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCE
T ss_pred EEEEEECCCCCceEEEEcCC-CcEEEEEc---CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCE
Confidence 44667889999999999986 68999997 55689999875 54433222 121 234559999987 899
Q ss_pred EEEEccC-------C----CCeEEEEecCCC-----CcEEEEe----CCCCCCeeEEEeCCCCeEEEEcCC---------
Q psy6570 86 MFWTELG-------I----KPRISGASIDGK-----NKFNLVD----NNIQWPTGITIDYPSQRLYWADPK--------- 136 (713)
Q Consensus 86 ly~td~~-------~----~~~I~~~~~dG~-----~~~~l~~----~~~~~p~glavd~~~~~LY~~d~~--------- 136 (713)
||++... . ..+|.|+.++.. ..++|+. ...+.+.+|+|++ +++||++...
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~ 172 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYL 172 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGT
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccc
Confidence 9999853 0 238999988643 2344442 2357799999996 5689998421
Q ss_pred -----------------------CCcEEEEeCCCC-----------ceeEEEecCCCCccceeeeee-CCeEEEEeCCCC
Q psy6570 137 -----------------------ARTIESINLNGK-----------DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTN 181 (713)
Q Consensus 137 -----------------------~~~I~~~~~~g~-----------~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~ 181 (713)
.++|+|++.||+ ..+++... +++|.+|+++ .+.||+++.+..
T Consensus 173 ~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G---~RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 173 FLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG---HRNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp TSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC---CSEEEEEEECTTSCEEEEEECSS
T ss_pred ccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC---CCCcceEEECCCCCEEEEecCCC
Confidence 367999999997 34445443 7899999998 578999987644
No 107
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.05 E-value=3e-08 Score=98.30 Aligned_cols=174 Identities=6% Similarity=-0.055 Sum_probs=119.1
Q ss_pred CCceeEEEccCcccEE---ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKTV---LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~---~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++|.++++.+.+.+. +.....+.||+++ +++||++++ ..+.|.++|++......-+..+ .|.++.+.+.
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~---~~~~v~viD~~t~~v~~~i~~g--~~~g~glt~D 115 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW---LKNIGFIYDRRTLSNIKNFTHQ--MKDGWGLATD 115 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET---TCSEEEEEETTTTEEEEEEECC--SSSCCEEEEC
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe---cCCEEEEEECCCCcEEEEEECC--CCCeEEEEEC
Confidence 5789999988754222 2233344566665 689999999 7899999998754333223333 3455545555
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeC-----CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEec
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDN-----NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHT 156 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-----~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~ 156 (713)
.++||+++ +.+ +|..++.+......-+.. .+..|++|++. +++||++.+..+.|.++|+..... ..+...
T Consensus 116 g~~l~vs~-gs~-~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 116 GKILYGSD-GTS-ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SSSEEEEC-SSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCEEEEEC-CCC-eEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 78999998 555 899999877554333321 24468899988 579999999999999999965443 333221
Q ss_pred C----------CCCccceeeeee--CCeEEEEeCCCCcEEEEcccC
Q psy6570 157 E----------DNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 157 ~----------~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~ 190 (713)
. .....|.||+++ +++||++....++|+.++...
T Consensus 192 g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp HHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 1 012356788887 568999999999999888653
No 108
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.05 E-value=7.4e-12 Score=113.55 Aligned_cols=108 Identities=25% Similarity=0.468 Sum_probs=74.6
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCC----CcCCC--------CCCC---CCCCCCCCeEecCCC------
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQC----TERED--------SPSC---HNYCDNAGLCSYSKQ------ 610 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C----~~~~~--------~~~C---~~~C~~~g~C~~~~~------ 610 (713)
+++|.+++|.+ ++|+++.++|+|.|++||+|..+ .+... ...| .+.|...+.|.+...
T Consensus 4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~ 82 (147)
T 2w86_A 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSP 82 (147)
T ss_dssp CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTT
T ss_pred CccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCC
Confidence 78999999974 79999999999999999997644 32100 0011 011111112222221
Q ss_pred ---CcceeecCCCcc---cCCCCcCCCCC---CCCCCCCeecCCCCccCCCCCceeeCCCCcccCC
Q psy6570 611 ---GKPVCTCVNGWS---GITCSERVSCA---HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVR 667 (713)
Q Consensus 611 ---g~~~C~C~~G~~---G~~C~~~~~C~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~ 667 (713)
-.|.|.|++||+ |..|+++++|. ++|.+ ++|++ ..++|+|.|++||+|+.
T Consensus 83 C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n------~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 83 CTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVN------TRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp TEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEE------ETTEEEEECCTTCCBCT
T ss_pred cccCCCcccCCCccccCCCCccCccccccCCCCCCCC-CEEEC------CCCCEEeeCCCCCccCC
Confidence 126789999995 89999999996 44885 58987 45679999999999875
No 109
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=1.1e-08 Score=106.19 Aligned_cols=160 Identities=16% Similarity=0.197 Sum_probs=118.5
Q ss_pred EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCC----CC
Q psy6570 20 TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGI----KP 95 (713)
Q Consensus 20 ~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~----~~ 95 (713)
.+......|.++++|+. ++|||++. ..+.|.++++++...+.+.......|.+|++|+ ++.||+++... .
T Consensus 39 ~~~~~~~~~~~~~~~~~-g~l~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~- 112 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQ-GQLFLLDV---FEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTG- 112 (333)
T ss_dssp EEESSCCCEEEEEECTT-SCEEEEET---TTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCC-
T ss_pred EEeccCccccCcEECCC-CCEEEEEC---CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCc-
Confidence 34456678999999964 67999988 678999999987665554433346799999996 57888887654 4
Q ss_pred eEEEEecCCCCcEEEEe--CCCCCCeeEEEeCCCCeEEEEcCC------CCcEEEEeCCCCceeEEEecCCCCccceeee
Q psy6570 96 RISGASIDGKNKFNLVD--NNIQWPTGITIDYPSQRLYWADPK------ARTIESINLNGKDRFVVYHTEDNGYKPYKLE 167 (713)
Q Consensus 96 ~I~~~~~dG~~~~~l~~--~~~~~p~glavd~~~~~LY~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~ 167 (713)
.|+++++++...+.++. .....|++|++|+ +++||+++.. ...|++++.++.....+... ...|.+++
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~ 188 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIA 188 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEE
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceE
Confidence 79999998877665543 2345789999996 5689998864 46899999887555544432 34577777
Q ss_pred ee--CCeEEEEeCCCCcEEEEccc
Q psy6570 168 VF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 168 ~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+. +..||+++...+.|++++..
T Consensus 189 ~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 189 LSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEEec
Confidence 65 34699998888889998874
No 110
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.03 E-value=2.2e-10 Score=98.53 Aligned_cols=88 Identities=25% Similarity=0.548 Sum_probs=64.4
Q ss_pred CCCCCCCC--------CCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCCCCC---CCCCCCCeEecCCCCcceeecCCC
Q psy6570 552 ANKCTPNY--------CSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCH---NYCDNAGLCSYSKQGKPVCTCVNG 620 (713)
Q Consensus 552 ~~~C~~~~--------C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~C~---~~C~~~g~C~~~~~g~~~C~C~~G 620 (713)
+++|..++ |.++|+|+++.++|+|.|++||+|..|++..+.++|. ..|.+ +|++.. ++|+|.|++|
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~-g~y~C~C~~G 82 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEV-GWRRCSCAPG 82 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECS-SSEEEECCTT
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCC-CCEEeECCCC
Confidence 45677666 9899999999999999999999999999865445673 24543 899887 8999999999
Q ss_pred ccc----CCCCcCCCCCCCCCCCCeecC
Q psy6570 621 WSG----ITCSERVSCAHFCFNGGTCRE 644 (713)
Q Consensus 621 ~~G----~~C~~~~~C~~~C~~~~~C~~ 644 (713)
|+| ..|+...+ .+|.+.+.|+.
T Consensus 83 ~~~~~~g~~C~~~~~--~pC~~~~~~i~ 108 (114)
T 1aut_L 83 YKLGDDLLQCHPAVK--FPCGRPWKRME 108 (114)
T ss_dssp EEECTTSSCEEECSS--SCTTCCC----
T ss_pred eeECCCCCccCcCcc--cCCCCCCccCC
Confidence 994 45654332 46777666665
No 111
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.02 E-value=5.9e-09 Score=107.14 Aligned_cols=175 Identities=18% Similarity=0.191 Sum_probs=120.4
Q ss_pred CceeEEEccCcccEE-ec-----CCCCCceEEEeccCCeEEEeecCCC------------CCCeEEEEecCCceEEEEEc
Q psy6570 7 GNVTRVKREMNLKTV-LS-----NLHDPRGVAVDWVGKNLYWTDAGGR------------SSNNIMVSTLEGRKKRTLLN 68 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~-~~-----~~~~p~gla~D~~~~~ly~td~~~~------------~~~~I~~~~~~G~~~~~l~~ 68 (713)
+.|+++++++..+.+ .. ....|.+|++|+. ++||+++.... ....|++++++|+.... .
T Consensus 92 ~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-~- 168 (314)
T 1pjx_A 92 LGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV-D- 168 (314)
T ss_dssp TEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE-E-
T ss_pred CCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe-c-
Confidence 367777777433322 11 2346899999975 68999987210 01579999988654433 2
Q ss_pred CCCCCcceEEEc----CCCCcEEEEccCCCCeEEEEecCCCCc----EEEEeC--CC-CCCeeEEEeCCCCeEEEEcCCC
Q psy6570 69 TGLNEPYDIALE----PLSGRMFWTELGIKPRISGASIDGKNK----FNLVDN--NI-QWPTGITIDYPSQRLYWADPKA 137 (713)
Q Consensus 69 ~~~~~p~~iavD----~~~~~ly~td~~~~~~I~~~~~dG~~~----~~l~~~--~~-~~p~glavd~~~~~LY~~d~~~ 137 (713)
..+..|.+|+++ +.++.|||++...+ +|++.++++... +.+... .. ..|.+|++|+ +++||+++...
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~ 246 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTK-KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGS 246 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTT-EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCC-eEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCC
Confidence 234679999999 87668999997766 899998763221 122221 12 5699999995 67999999888
Q ss_pred CcEEEEeCC-CCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 138 RTIESINLN-GKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 138 ~~I~~~~~~-g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+.|.+++.+ |.....+... ...|.++++. +..||+++...+.|++++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCP---FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TEEEEECTTCBSCSEEEECS---SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CEEEEEcCCCCcEeEEEeCC---CCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 899999998 6554444322 3567788875 33599998888899998864
No 112
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.02 E-value=2.4e-08 Score=103.42 Aligned_cols=186 Identities=8% Similarity=0.011 Sum_probs=127.0
Q ss_pred CcccCCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE-EEEEcCCCCCcce-E
Q psy6570 2 ASISSGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK-RTLLNTGLNEPYD-I 77 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~-~~l~~~~~~~p~~-i 77 (713)
++...++|..+++.+.+. .+......| +|++++.++.||++.. ..+.|.++++++... ...+.. ...|.. |
T Consensus 15 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~---~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~ 89 (331)
T 3u4y_A 15 VEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSD---FCQTLVQIETQLEPPKVVAIQE-GQSSMADV 89 (331)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEES---TTCEEEEEECSSSSCEEEEEEE-CSSCCCCE
T ss_pred EecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeC---CCCeEEEEECCCCceeEEeccc-CCCCccce
Confidence 455678899999876432 223345556 9999998888999998 678999999976553 333323 367888 9
Q ss_pred EEcCCCCcEEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCc-EEEEeCCCCceeE-E-
Q psy6570 78 ALEPLSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKART-IESINLNGKDRFV-V- 153 (713)
Q Consensus 78 avD~~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~-I~~~~~~g~~~~~-~- 153 (713)
+++|..++||.+... ....|.+.+++.......+. ....|.++++++++++||+++...+. |..++++...... .
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 999988888844332 11279999987655444443 34568999999988899999987777 7766665422211 0
Q ss_pred EecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 154 YHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 154 ~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
.........|.++++. +.+||++....+.|..++...+..
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 1100123457777765 456999998889999998765554
No 113
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.01 E-value=1.5e-08 Score=100.46 Aligned_cols=166 Identities=8% Similarity=-0.002 Sum_probs=114.8
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC-ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG-RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G-~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG 104 (713)
..|+||++++. ++||++.... ....|.++++.. +....+.......+.+|+++ +++||++++..+ .|.+++.+.
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~-~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~-~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLY-GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN-IGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECST-TEEEEEECST-TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS-EEEEEETTT
T ss_pred CCcccEEEeCC-CeEEEECCCC-CCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC-EEEEEECCC
Confidence 35789999975 7999987410 357899999975 44444432333456678886 679999999877 999999874
Q ss_pred CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCcee-EEEecC--CCCccceeeeeeCCeEEEEeCCCC
Q psy6570 105 KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRF-VVYHTE--DNGYKPYKLEVFEDNLYFSTYRTN 181 (713)
Q Consensus 105 ~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~-~~~~~~--~~~~~p~~i~~~~~~ly~td~~~~ 181 (713)
.....-+... .|.|+.|.+++++||+++ ..++|+.+|.+..... .+.... ..+..|..+.+.+++||++.|..+
T Consensus 96 ~~v~~~i~~g--~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~ 172 (266)
T 2iwa_A 96 LSNIKNFTHQ--MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp TEEEEEEECC--SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSS
T ss_pred CcEEEEEECC--CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCC
Confidence 3222222222 355555555689999999 6889999998774432 222211 112346677777889999999999
Q ss_pred cEEEEcccCCCcceeeec
Q psy6570 182 NILKINKFGNSDFNVLAN 199 (713)
Q Consensus 182 ~i~~~~~~~~~~~~~~~~ 199 (713)
.|.+++...+.....+..
T Consensus 173 ~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILL 190 (266)
T ss_dssp EEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCcEEEEEEC
Confidence 999999988776666643
No 114
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.98 E-value=3.7e-08 Score=101.97 Aligned_cols=179 Identities=11% Similarity=0.124 Sum_probs=126.1
Q ss_pred ccCCceeEEEccCcc--cEEecCCCCCce-EEEeccCCeEEEeecCCCCCC--eEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 4 ISSGNVTRVKREMNL--KTVLSNLHDPRG-VAVDWVGKNLYWTDAGGRSSN--NIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~--~~~~~~~~~p~g-la~D~~~~~ly~td~~~~~~~--~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
...++|+.+++.+.. ...+.....|.. +++++.++.||.++. ..+ .|.+.+++.......+.. ...|.+|+
T Consensus 59 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~ 134 (331)
T 3u4y_A 59 DFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTG---LNHPFNMQSYSFLKNKFISTIPI-PYDAVGIA 134 (331)
T ss_dssp STTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCC---SSSSCEEEEEETTTTEEEEEEEC-CTTEEEEE
T ss_pred CCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecC---CCCcccEEEEECCCCCeEEEEEC-CCCccceE
Confidence 346688889887654 333556677888 999999888995444 324 899999986655444433 36799999
Q ss_pred EcCCCCcEEEEccCCCCe-EEEEecCCCCcE-----EEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce--
Q psy6570 79 LEPLSGRMFWTELGIKPR-ISGASIDGKNKF-----NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-- 150 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~-I~~~~~dG~~~~-----~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-- 150 (713)
++|.+++||+++.... . |.+.+++..... .++ .....|.++++++++++||++....+.|..++++....
T Consensus 135 ~spdg~~l~~~~~~~~-~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 135 ISPNGNGLILIDRSSA-NTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT 212 (331)
T ss_dssp ECTTSSCEEEEEETTT-TEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE
T ss_pred ECCCCCEEEEEecCCC-ceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc
Confidence 9998888999987756 5 676666543322 122 23456899999998888999999899999999865443
Q ss_pred -eEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCC
Q psy6570 151 -FVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 151 -~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~ 191 (713)
...+.. ...|.++++. +.+||++....+.|..++..++
T Consensus 213 ~~~~~~~---~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 213 LLNAVGT---NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEEEEEC---SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred eeeeccC---CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 212222 2456666665 5679999887788888886544
No 115
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.96 E-value=4.1e-10 Score=103.14 Aligned_cols=76 Identities=30% Similarity=0.773 Sum_probs=49.0
Q ss_pred CEEEcCCCeee-CCCCCccCCCCcCCCCCCCCCcEeccCCCCccccCCCCCcCCCCc--------cCCCCCC---CCCCe
Q psy6570 395 GTCIATTQTCV-CPPGFTGDTCQQCLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ--------YSQCKNY---CVNGE 462 (713)
Q Consensus 395 ~~C~~~~~~C~-C~~g~~g~~C~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~--------~~~C~~~---~~~~~ 462 (713)
+.|...+++|. |.++|+|..|+ +|++||+|..+. .-.|... -..+.
T Consensus 68 ~~C~~~tG~C~~C~~g~~G~~Ce----------------------~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~ 125 (162)
T 1klo_A 68 GNCNRLTGECLKCIYNTAGFYCD----------------------RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSS 125 (162)
T ss_dssp CCBCTTTCCBCCBCTTEETTTTC----------------------EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCC
T ss_pred CcccCCCCcccCCCCCCcCCCcC----------------------cCchhhcCCccccCCCCCCeeccCCCCCccCCCCC
Confidence 45655577884 99999888876 355666665544 1122221 01136
Q ss_pred eecCCCCCeecCCCCccCCCCCCccccCCCCCCcccCCCCccCCC
Q psy6570 463 CSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKK 507 (713)
Q Consensus 463 C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~ 507 (713)
|....| +|.|++||+|..|+. |.+||+|..
T Consensus 126 Cd~~tG--~C~C~~g~~G~~Cd~-------------C~~g~~g~~ 155 (162)
T 1klo_A 126 CNPVTG--QCQCLPHVSGRDCGT-------------CDPGYYNLQ 155 (162)
T ss_dssp CCTTTC--CCCBCTTEESTTCCE-------------ECTTCBCGG
T ss_pred CCCCCC--EeECCCCCcCCCCCC-------------CCCCcccCC
Confidence 765444 899999999999885 778888754
No 116
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.96 E-value=8.7e-08 Score=99.31 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=130.7
Q ss_pred cCCceeEEEcc-Cc---ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC--ceEE----EEEcCCCCCc
Q psy6570 5 SSGNVTRVKRE-MN---LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--RKKR----TLLNTGLNEP 74 (713)
Q Consensus 5 ~~~~I~~~~~~-~~---~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G--~~~~----~l~~~~~~~p 74 (713)
..+.|..++++ +. ..........|.++++++.++.||+++. ..+.|.+++++. +... .+.......|
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL---KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP 180 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG---GGTEEEEEEECTTSCEEEEEEEEEECSTTCCE
T ss_pred CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC---CCCEEEEEEecCCCceeeecccccccCCCCCc
Confidence 35567777763 11 1122455667999999999889999986 568899988764 3222 1222223579
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCC--CCcEE--EEe-C--C---CCCCeeEEEeCCCCeEEEEcCCCCcEEEEe
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDG--KNKFN--LVD-N--N---IQWPTGITIDYPSQRLYWADPKARTIESIN 144 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG--~~~~~--l~~-~--~---~~~p~glavd~~~~~LY~~d~~~~~I~~~~ 144 (713)
.+|+++|..++||+++.... .|...+++. ...+. .+. . . ...|.+|++++.+++||++....+.|..++
T Consensus 181 ~~~~~~pdg~~l~~~~~~~~-~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d 259 (343)
T 1ri6_A 181 RHMVFHPNEQYAYCVNELNS-SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFS 259 (343)
T ss_dssp EEEEECTTSSEEEEEETTTT-EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCC-EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEE
Confidence 99999998888999986655 888888864 22211 111 1 1 235668999998889999998888898888
Q ss_pred CC--CCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEE--cccCCCcceeeec-cccccccEEEEeecccc
Q psy6570 145 LN--GKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKI--NKFGNSDFNVLAN-NLNRASDVLILQENKQA 216 (713)
Q Consensus 145 ~~--g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~--~~~~~~~~~~~~~-~~~~~~~i~v~~~~~q~ 216 (713)
++ +...+.+..... ...|.++++. +.+||++....+.|..+ +..++....+... ....|..+.+....+++
T Consensus 260 ~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 260 VSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGGS 337 (343)
T ss_dssp ECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC---
T ss_pred EcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCCc
Confidence 87 433333332221 2236667765 56799988766776665 4433322222111 23678888888776664
No 117
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.96 E-value=6.2e-08 Score=101.84 Aligned_cols=160 Identities=13% Similarity=0.025 Sum_probs=108.4
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-------E------EEEEcCCCCCcceEEEcCCCCcEEEEccCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-------K------RTLLNTGLNEPYDIALEPLSGRMFWTELGI 93 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-------~------~~l~~~~~~~p~~iavD~~~~~ly~td~~~ 93 (713)
.|.++++++.++.||+++. ..+.|.+++++... . ..+.......|.+|+++|..++||+++...
T Consensus 156 ~~~~~~~spdg~~l~~~~~---~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 232 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDL---GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG 232 (361)
T ss_dssp CEEEEEECTTSSEEEEEET---TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cceEEEECCCCCEEEEEeC---CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC
Confidence 3478999998888999998 67788888766422 1 122223346799999999877899998665
Q ss_pred CCeEEEEecCCCCcEEEE--e---CCCCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCC--CCceeEEEecCCCCcccee
Q psy6570 94 KPRISGASIDGKNKFNLV--D---NNIQWPTGITIDYPSQRLYWADPK-ARTIESINLN--GKDRFVVYHTEDNGYKPYK 165 (713)
Q Consensus 94 ~~~I~~~~~dG~~~~~l~--~---~~~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~--g~~~~~~~~~~~~~~~p~~ 165 (713)
. .|.+.+++....+.+. . .....|.+|++++++++||+++.. .++|..++++ ....+.+..... ...|.+
T Consensus 233 ~-~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~ 310 (361)
T 3scy_A 233 G-TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRN 310 (361)
T ss_dssp C-EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCE
T ss_pred C-eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCce
Confidence 5 7888887643322222 1 123567899999999999999988 7888887765 223333332222 345667
Q ss_pred eeee--CCeEEEEeCCCCcEEE--EcccCC
Q psy6570 166 LEVF--EDNLYFSTYRTNNILK--INKFGN 191 (713)
Q Consensus 166 i~~~--~~~ly~td~~~~~i~~--~~~~~~ 191 (713)
|++. +.+||+++...+.|.. ++..++
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 7665 5679999877777766 454333
No 118
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.95 E-value=5.2e-10 Score=89.74 Aligned_cols=68 Identities=31% Similarity=0.803 Sum_probs=58.7
Q ss_pred CCCCCC-CCCCCCcEEeecCCCceeeCCCCCc--CCCCCcCCCCCCC--CCCCCCCCeEecCCCCcceeecCCCcccCC
Q psy6570 552 ANKCTP-NYCSNNGTCVLIEGKPSCKCLPPYS--GKQCTEREDSPSC--HNYCDNAGLCSYSKQGKPVCTCVNGWSGIT 625 (713)
Q Consensus 552 ~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--G~~C~~~~~~~~C--~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~ 625 (713)
+++|.. ++|.+ ++|+++.++|+|.|++||+ |..|+++ ++| .++|.+ ++|++.. ++|+|.|++||+|..
T Consensus 5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di---deC~~~~~C~~-~~C~n~~-g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT---DECSVGNPCGN-GTCKNVI-GGFECTCEEGFEPGP 77 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC---CGGGTCCTTSS-SCEEECS-SSEEECCSSSSCCCS
T ss_pred cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc---ccccCCCCCCC-CEeECCC-CCEEeECCCCeEeCC
Confidence 678885 78974 8999999999999999997 8999765 888 467975 7999887 899999999999753
No 119
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.95 E-value=4.2e-10 Score=101.15 Aligned_cols=74 Identities=28% Similarity=0.759 Sum_probs=62.9
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCCCCC---CCCCCCCeE-ecCCCCcceeecCCCcc----c
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCH---NYCDNAGLC-SYSKQGKPVCTCVNGWS----G 623 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~C~---~~C~~~g~C-~~~~~g~~~C~C~~G~~----G 623 (713)
+++|.+++|.++|+|++..++|+|.|++||+|..|++. ++|. ..|.+ +| .+.. |+|.|.|++||+ |
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~---deC~~~~~~C~~--~C~~n~~-g~y~C~C~~Gy~l~~dG 121 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD---ATCNIKNGRCKQ--FCKTGAD-SKVLCSCTTGYRLAPDQ 121 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE---CCTTSGGGSCSS--BCCCCSS-SCCCCBCCTTEEECTTS
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC---ccccCCCCCCcC--CCCCCCC-CCEEeEcCCCcEeCCCC
Confidence 67899999999999999999999999999999999886 7783 35765 89 7765 899999999999 8
Q ss_pred CCCCcCCC
Q psy6570 624 ITCSERVS 631 (713)
Q Consensus 624 ~~C~~~~~ 631 (713)
..|+++++
T Consensus 122 ~~C~~~~~ 129 (146)
T 1x7a_L 122 KSCKPAVP 129 (146)
T ss_dssp SSEEECSS
T ss_pred CcCCCCCC
Confidence 88887654
No 120
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.89 E-value=1.1e-07 Score=99.19 Aligned_cols=156 Identities=15% Similarity=0.137 Sum_probs=105.0
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecC--CceEEE--EEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE--GRKKRT--LLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~--G~~~~~--l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
.|.++++++.++ ||+++. ..+.|.+++++ |+.... +.......|.+|+++|..++||+++.... .|.+.++
T Consensus 142 ~~~~~~~spdg~-l~v~~~---~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~~~ 216 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVIDL---GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-QIASLKY 216 (347)
T ss_dssp CEEEEEECTTSC-EEEEET---TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-EEEEEEE
T ss_pred CceEEEECCCCc-EEEEeC---CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-EEEEEEe
Confidence 467899998766 999998 67889888876 432221 12222357999999997777999887666 7777777
Q ss_pred CC-CCcEE-E--EeCC------CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC-ceeEEEecCCCCccceeeeee--
Q psy6570 103 DG-KNKFN-L--VDNN------IQWPTGITIDYPSQRLYWADPKARTIESINLNGK-DRFVVYHTEDNGYKPYKLEVF-- 169 (713)
Q Consensus 103 dG-~~~~~-l--~~~~------~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~-~~~~~~~~~~~~~~p~~i~~~-- 169 (713)
+. +.... + +... ...|.+|++++++++||+++...++|..++++.. ..+.+.........|.+|++.
T Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd 296 (347)
T 3hfq_A 217 DTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT 296 (347)
T ss_dssp ETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT
T ss_pred cCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC
Confidence 64 12211 1 1111 1358889999998899999988888888887632 223332222223457777765
Q ss_pred CCeEEEEeCCCCcEEEEc
Q psy6570 170 EDNLYFSTYRTNNILKIN 187 (713)
Q Consensus 170 ~~~ly~td~~~~~i~~~~ 187 (713)
+.+||+++...+.|..++
T Consensus 297 g~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp SSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEcCCCcEEEEE
Confidence 567999988777776663
No 121
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.89 E-value=9.8e-08 Score=99.63 Aligned_cols=179 Identities=13% Similarity=0.085 Sum_probs=116.5
Q ss_pred CCceeEEEccCcc-cEE---ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC--CceEEE--EEcCC-------
Q psy6570 6 SGNVTRVKREMNL-KTV---LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE--GRKKRT--LLNTG------- 70 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~---~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~--G~~~~~--l~~~~------- 70 (713)
++.|+.+++++.. +.+ ......|.+|++++.++.||+++. ..+.|.+++++ |+...+ +...+
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~---~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~ 138 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY---HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQ 138 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET---TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC---CCCEEEEEEeCCCCCeeecceeecCCCCCCccc
Confidence 4567777775433 222 235678999999999889999987 56777777764 333221 11111
Q ss_pred -CCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc-EEEE---eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeC
Q psy6570 71 -LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK-FNLV---DNNIQWPTGITIDYPSQRLYWADPKARTIESINL 145 (713)
Q Consensus 71 -~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~-~~l~---~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~ 145 (713)
...|.+++++|..+ ||+++.+.. +|.+.+++.... ..+. ......|.+|++++++++||+++...++|..+++
T Consensus 139 ~~~~~~~~~~spdg~-l~v~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 216 (347)
T 3hfq_A 139 DGSHIHYTDLTPDNR-LAVIDLGSD-KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKY 216 (347)
T ss_dssp SSCCEEEEEECTTSC-EEEEETTTT-EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cCCCceEEEECCCCc-EEEEeCCCC-EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 13477899998655 999998766 888888772222 2221 1223478999999988889999988888888877
Q ss_pred CC--CceeEEEecCC------CCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 146 NG--KDRFVVYHTED------NGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 146 ~g--~~~~~~~~~~~------~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+. .....+..... ....|.++++. +.+||+++...+.|..++..
T Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 217 DTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp ETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred cCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 64 22222221111 01346666665 55799998888888777654
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.88 E-value=1.6e-07 Score=99.54 Aligned_cols=183 Identities=19% Similarity=0.278 Sum_probs=134.3
Q ss_pred CcccCCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEc
Q psy6570 2 ASISSGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALE 80 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD 80 (713)
+...++.|..+++.+.+. ..+.....|.++++.+.++.||++.. ..+.|.+.++........+... ..|.+|+++
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~~s 82 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANA---HSNDVSIIDTATNNVIATVPAG-SSPQGVAVS 82 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEG---GGTEEEEEETTTTEEEEEEECS-SSEEEEEEC
T ss_pred EcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECC---CCCeEEEEECCCCeEEEEEECC-CCccceEEC
Confidence 345678899999886542 23455567899999998888999987 6789999998655444444333 489999999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCC
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
|.+++||++..... .|.+.++........+. ....+.++++++.+++||++....+.|+.+++........... .
T Consensus 83 pdg~~l~~~~~~~~-~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~ 157 (391)
T 1l0q_A 83 PDGKQVYVTNMASS-TLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV---G 157 (391)
T ss_dssp TTSSEEEEEETTTT-EEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---C
T ss_pred CCCCEEEEEECCCC-EEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec---C
Confidence 98888999886555 89999988655544444 3446899999998889999998889999999876544433333 2
Q ss_pred ccceeeeee--CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 161 YKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 161 ~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
..|..+++. +.+||++....+.|+.++...+..
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 345666654 557888888888888888765543
No 123
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.87 E-value=1.1e-09 Score=104.44 Aligned_cols=97 Identities=28% Similarity=0.644 Sum_probs=75.3
Q ss_pred CCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCC-------CCC-----CCCCCCCCeEecCCCCcceeecCCC----
Q psy6570 557 PNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDS-------PSC-----HNYCDNAGLCSYSKQGKPVCTCVNG---- 620 (713)
Q Consensus 557 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~-------~~C-----~~~C~~~g~C~~~~~g~~~C~C~~G---- 620 (713)
+..|+++|+|+. .+|.|.+||+|..|+..... ..| ..+|+++|+|.. ++|.|++|
T Consensus 95 ~~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-----g~C~C~~gw~~~ 165 (217)
T 2p28_B 95 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----GQCLCHTSDVPG 165 (217)
T ss_dssp -CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-----TEEEECCCCSTT
T ss_pred CCccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-----CceECCCCCCCc
Confidence 346889999983 58999999999999843110 135 256889999984 36999999
Q ss_pred --cccCCCCc-CCCCCC----CCCCC--CeecCCCCccCCCCCceeeCCCCcccCCCCccc
Q psy6570 621 --WSGITCSE-RVSCAH----FCFNG--GTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672 (713)
Q Consensus 621 --~~G~~C~~-~~~C~~----~C~~~--~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~ 672 (713)
|+|..|+. ...|.. +|.++ |+|.. ++|.|.+||+|..|+.+.
T Consensus 166 ~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----------g~C~C~~G~~G~~C~~~~ 216 (217)
T 2p28_B 166 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----------GKCRCHPGFEGSACQHHH 216 (217)
T ss_dssp CCEESTTSCEESSCSCEETTEETTCTTTEEEET----------TEEEECTTEESTTSCEEC
T ss_pred ccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----------CeeECCCCCccCCcCCCC
Confidence 69999984 356863 58887 99986 699999999999998653
No 124
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.86 E-value=1.1e-09 Score=100.36 Aligned_cols=55 Identities=33% Similarity=0.895 Sum_probs=43.2
Q ss_pred eec-CCCCccCCCCCCccccCCCCCCcccCCCCccCCCCC--------CCCCCCCc------EEcCCCCCeeccCCCCCC
Q psy6570 471 KCM-CSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCD--------TCTCLNGG------TCIPNSKNNVCKCPSQYT 535 (713)
Q Consensus 471 ~C~-C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~--------~~~C~~~g------~C~~~~~~~~C~C~~g~~ 535 (713)
+|. |.++|+|..|+. |++||+|+.+. .+.|.+.+ .|... +++|.|++||+
T Consensus 76 ~C~~C~~g~~G~~Ce~-------------C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~--tG~C~C~~g~~ 140 (162)
T 1klo_A 76 ECLKCIYNTAGFYCDR-------------CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPV--TGQCQCLPHVS 140 (162)
T ss_dssp CBCCBCTTEETTTTCE-------------ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTT--TCCCCBCTTEE
T ss_pred cccCCCCCCcCCCcCc-------------CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCC--CCEeECCCCCc
Confidence 784 999999999885 88899886554 56777654 67654 57999999999
Q ss_pred CCCCc
Q psy6570 536 GRRCE 540 (713)
Q Consensus 536 G~~C~ 540 (713)
|.+|+
T Consensus 141 G~~Cd 145 (162)
T 1klo_A 141 GRDCG 145 (162)
T ss_dssp STTCC
T ss_pred CCCCC
Confidence 98875
No 125
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.86 E-value=8.3e-07 Score=86.12 Aligned_cols=173 Identities=11% Similarity=0.035 Sum_probs=115.2
Q ss_pred CCceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
..+|.++++.+.+.+. +.....+.|..+...+++||++.+ ..++|+++|++......-+..+ ..+.+|+-| ++
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw---~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~d--g~ 115 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW---RNHEGFVYDLATLTPRARFRYP-GEGWALTSD--DS 115 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES---SSSEEEEEETTTTEEEEEEECS-SCCCEEEEC--SS
T ss_pred CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe---eCCEEEEEECCcCcEEEEEeCC-CCceEEeeC--CC
Confidence 3578999988754322 333345544444445799999999 7899999998764433333333 366777765 68
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeC-----CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC--
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDN-----NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE-- 157 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~-----~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~-- 157 (713)
+||++| +.. +|+.++........-+.. .+..++.|... +++||...+.++.|.++|+....+...+...
T Consensus 116 ~L~vSd-gs~-~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l 191 (243)
T 3mbr_X 116 HLYMSD-GTA-VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQAL 191 (243)
T ss_dssp CEEEEC-SSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGG
T ss_pred EEEEEC-CCC-eEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcC
Confidence 999999 455 899998875443332221 23455666665 8899999999999999998654443333211
Q ss_pred ---------CCCccceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 158 ---------DNGYKPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 158 ---------~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
....-+.||+++ .++||+|...=.+++++..
T Consensus 192 ~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 192 VPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp STTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 112356788887 6799999866677777764
No 126
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.85 E-value=7.1e-08 Score=102.77 Aligned_cols=186 Identities=13% Similarity=0.060 Sum_probs=118.6
Q ss_pred CceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCCceE-EEEEcC-C-----CC
Q psy6570 7 GNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEGRKK-RTLLNT-G-----LN 72 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G~~~-~~l~~~-~-----~~ 72 (713)
+.|+.+|+.+.+.+- +.....| +|++++.+++||+++... ...+.|.++|+..... ..+... . ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 789999988754322 4445678 999999999999998510 0245799999876443 333222 0 35
Q ss_pred CcceEEEcCCCCcEEEEccC-CCCeEEEEecCCCCcE-EE---------------------------EeC----------
Q psy6570 73 EPYDIALEPLSGRMFWTELG-IKPRISGASIDGKNKF-NL---------------------------VDN---------- 113 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~-~~~~I~~~~~dG~~~~-~l---------------------------~~~---------- 113 (713)
.|.+|+++|..++||+++.. .+ .|.++++...... ++ +..
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~-~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAP-AVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSC-EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CcceEEEcCCCCEEEEEecCCCC-eEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 79999999999999999764 33 5555544321110 00 000
Q ss_pred ----------------------------------------------C--C---------CCCee---EEEeCCCCeEEEE
Q psy6570 114 ----------------------------------------------N--I---------QWPTG---ITIDYPSQRLYWA 133 (713)
Q Consensus 114 ----------------------------------------------~--~---------~~p~g---lavd~~~~~LY~~ 133 (713)
. + ..|.+ +++++++++||++
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 0 0 01333 7777777888887
Q ss_pred cC---------CCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CC-eEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 134 DP---------KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--ED-NLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 134 d~---------~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~-~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
.. ..+.|..+|+....+..-+.. ...|.+|++. +. +||++.+..+.|..++.........+
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v---g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIEL---GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEEC---CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 53 134688888765443222221 2357777765 56 79999988999999998877666555
No 127
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=4.9e-07 Score=88.47 Aligned_cols=168 Identities=11% Similarity=0.032 Sum_probs=111.9
Q ss_pred ecCCCCC--ceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEE
Q psy6570 22 LSNLHDP--RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRIS 98 (713)
Q Consensus 22 ~~~~~~p--~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~ 98 (713)
.+....| +||+++ ++.||++.... ....|.+++++... ...+....-....||+++ +++||+++|..+ +++
T Consensus 37 ~phd~~~ftqGL~~~--~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~-~v~ 110 (262)
T 3nol_A 37 YPHDTKAFTEGFFYR--NGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG-LGF 110 (262)
T ss_dssp EECCTTCEEEEEEEE--TTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS-EEE
T ss_pred ecCCCCcccceEEEE--CCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC-EEE
Confidence 3445566 999998 57999988610 13489999997544 444432222223557775 689999999877 999
Q ss_pred EEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEEecC--CCCccceeeeeeCCeEEE
Q psy6570 99 GASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVYHTE--DNGYKPYKLEVFEDNLYF 175 (713)
Q Consensus 99 ~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~--~~~~~p~~i~~~~~~ly~ 175 (713)
+++++......-+... ..+.||+.| +++||++|. +++|+.+|..... ...+.... ..+..+..|.+.+++||+
T Consensus 111 v~D~~t~~~~~ti~~~-~eG~glt~d--g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lya 186 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYD-GEGWGLTHN--DQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFA 186 (262)
T ss_dssp EEETTTCCEEEEEECS-SCCCCEEEC--SSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred EEECccCcEEEEEECC-CCceEEecC--CCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEE
Confidence 9998754443333322 245666665 789999994 7899999987533 33332211 112223346667889999
Q ss_pred EeCCCCcEEEEcccCCCcceeeec
Q psy6570 176 STYRTNNILKINKFGNSDFNVLAN 199 (713)
Q Consensus 176 td~~~~~i~~~~~~~~~~~~~~~~ 199 (713)
..|..+.|.+|++..+.....+..
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEEC
T ss_pred EEccCCeEEEEECCCCcEEEEEEC
Confidence 999999999999988776666544
No 128
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.82 E-value=2e-09 Score=96.44 Aligned_cols=77 Identities=34% Similarity=0.869 Sum_probs=62.0
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCc-CCCCCCCCCCCCCCC---eEecCCCC-cceeecCCCcc----
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTE-REDSPSCHNYCDNAG---LCSYSKQG-KPVCTCVNGWS---- 622 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~-~~~~~~C~~~C~~~g---~C~~~~~g-~~~C~C~~G~~---- 622 (713)
+++|.+++|.++|+|+++.++|+|.|++||+|..|+. ..+...| .|.+++ +|++.. + +|.|.|++||+
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c--~~~~~~C~~~C~~~~-g~~y~C~C~~Gy~l~~d 123 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLIC--VNENGGCEQYCSDHT-GTKRSCRCHEGYSLLAD 123 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCST--TTGGGGCSSEEECCT-TSCCEEECCTTEEECTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccc--cCCCCCccCEeECCC-CCCEEEECCCCceECCC
Confidence 6789999999999999999999999999999999986 2222223 233333 899877 7 99999999999
Q ss_pred cCCCCcCCC
Q psy6570 623 GITCSERVS 631 (713)
Q Consensus 623 G~~C~~~~~ 631 (713)
|..|+++++
T Consensus 124 G~~C~~~~e 132 (142)
T 2c4f_L 124 GVSCTPTVE 132 (142)
T ss_dssp SSCEEESSS
T ss_pred CCCCCCCCc
Confidence 888887655
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.82 E-value=4.5e-07 Score=96.10 Aligned_cols=184 Identities=21% Similarity=0.228 Sum_probs=132.2
Q ss_pred cCCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 5 SSGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
.++.|..+++.+... ..+.....|.++++++.++.||++.. ..+.|.+.++........+.. ...|.+|++++.+
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~---~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg 127 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM---ASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDG 127 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTS
T ss_pred CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC---CCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCC
Confidence 467788888765432 22444458899999999889999987 668999999987655544433 3578999999888
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
++||++..... .|.+.++........+. ....|..+++++.+++||++....+.|+.+++........... ...+
T Consensus 128 ~~l~~~~~~~~-~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~ 202 (391)
T 1l0q_A 128 KKLYVTNNGDK-TVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV---EAAP 202 (391)
T ss_dssp SEEEEEETTTT-EEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSEE
T ss_pred CEEEEEeCCCC-EEEEEECCCCcEEEEEe-cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---CCCc
Confidence 88989887666 89999987654444443 2356899999998889999988889999999876554433332 2355
Q ss_pred eeeeee--CCeEEEEeC--CCCcEEEEcccCCCcceee
Q psy6570 164 YKLEVF--EDNLYFSTY--RTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 164 ~~i~~~--~~~ly~td~--~~~~i~~~~~~~~~~~~~~ 197 (713)
.++++. +.+||++.. ..+.|+.++...+.....+
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 666654 557888775 6778888887655444333
No 130
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.81 E-value=2e-09 Score=87.26 Aligned_cols=67 Identities=30% Similarity=0.746 Sum_probs=55.9
Q ss_pred CCCCCCCC--CCCCcEEeecCCCceeeCCCCCc-----CCCCCcCCCCCCC-CC--CCCCCCeEecCCCCcceeecCCCc
Q psy6570 552 ANKCTPNY--CSNNGTCVLIEGKPSCKCLPPYS-----GKQCTEREDSPSC-HN--YCDNAGLCSYSKQGKPVCTCVNGW 621 (713)
Q Consensus 552 ~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~-----G~~C~~~~~~~~C-~~--~C~~~g~C~~~~~g~~~C~C~~G~ 621 (713)
+++|..++ |. +++|+++.++|+|.|++||+ |..|+++ ++| .. .|. +++|++.. |+|.|.|++||
T Consensus 3 ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di---deC~~~~~~C~-~~~C~n~~-g~y~C~C~~G~ 76 (86)
T 1lmj_A 3 IDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDI---DECQRDPLLCR-GGVCHNTE-GSYRCECPPGH 76 (86)
T ss_dssp CCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEEC---CHHHHCSSTTT-TSEEEEET-TEEEEESCTTS
T ss_pred cccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCCc---ccccCCCCcCC-CCEeEcCC-CCEEEECcCCc
Confidence 67888655 95 46999999999999999998 7789865 888 33 476 58999887 99999999999
Q ss_pred ccC
Q psy6570 622 SGI 624 (713)
Q Consensus 622 ~G~ 624 (713)
++.
T Consensus 77 ~~~ 79 (86)
T 1lmj_A 77 QLS 79 (86)
T ss_dssp CCC
T ss_pred ccC
Confidence 875
No 131
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.80 E-value=1e-09 Score=102.62 Aligned_cols=81 Identities=28% Similarity=0.719 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCC-CCCC---CCCCCCCeEecCCCCcceeecCCCcc----c
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDS-PSCH---NYCDNAGLCSYSKQGKPVCTCVNGWS----G 623 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~-~~C~---~~C~~~g~C~~~~~g~~~C~C~~G~~----G 623 (713)
+++|.+++|.++|+|++..++|+|.|++||+|..|+.. + ++|. ..|.+ .|.+.. |+|.|.|++||+ |
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~--i~deC~~~~~~C~~--~C~n~~-gsy~C~C~~Gy~l~~dG 116 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF--TRKLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNG 116 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEET-TEEEEECCTTEEECTTS
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceecccccc--ccccccCCCCCCCC--EeECCC-CCeEEECCCCceeCCCC
Confidence 67899999999999999999999999999999999863 2 5672 45765 899877 899999999999 8
Q ss_pred CCCCcCCCCCCCCCCC
Q psy6570 624 ITCSERVSCAHFCFNG 639 (713)
Q Consensus 624 ~~C~~~~~C~~~C~~~ 639 (713)
..|++..+ .+|.+.
T Consensus 117 ~~C~~~~~--~PC~~~ 130 (195)
T 1nfu_B 117 KACIPTGP--YPCGKQ 130 (195)
T ss_dssp SCEEESSS--SCTTCC
T ss_pred CccccCCC--CCCCCC
Confidence 88987542 455543
No 132
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=8.8e-07 Score=86.64 Aligned_cols=169 Identities=7% Similarity=-0.005 Sum_probs=113.4
Q ss_pred CceeEEEccCcccEE-ecCCCCC--ceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCC
Q psy6570 7 GNVTRVKREMNLKTV-LSNLHDP--RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~-~~~~~~p--~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~ 82 (713)
.+|.++++.+.+.+. +.....+ .||+++ +++||++.+ ..++++++|++... ...+- .+ ..+.+|+.|
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw---~~~~v~v~D~~t~~~~~ti~-~~-~eG~glt~d-- 135 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTW---KNGLGFVWNIRNLRQVRSFN-YD-GEGWGLTHN-- 135 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEES---SSSEEEEEETTTCCEEEEEE-CS-SCCCCEEEC--
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEe---eCCEEEEEECccCcEEEEEE-CC-CCceEEecC--
Confidence 478888888654222 3333455 456664 789999999 78999999987544 44443 33 366777766
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcE-EEEe----CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKF-NLVD----NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE 157 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~-~l~~----~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~ 157 (713)
+++||.+| +.+ +|+.++....... .+.. ..+..++.|.+. +++||+..+..+.|.++|.....+...+...
T Consensus 136 g~~L~~Sd-Gs~-~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 136 DQYLIMSD-GTP-VLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp SSCEEECC-SSS-EEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred CCEEEEEC-CCC-eEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 68999998 455 8999988754333 2221 124556677776 7899999999999999998655444333321
Q ss_pred C----------CCccceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 158 D----------NGYKPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 158 ~----------~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
. ...-|.||+++ +++||+|...=.+++++..
T Consensus 212 ~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 212 GILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp TGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred cCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 1 12346788876 6789999866667777654
No 133
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.80 E-value=2.4e-07 Score=90.64 Aligned_cols=164 Identities=11% Similarity=0.049 Sum_probs=113.2
Q ss_pred cCCCCC--ceEEEeccCCeEEEeecCCCCCCeEEEEecCC-ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEE
Q psy6570 23 SNLHDP--RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG-RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISG 99 (713)
Q Consensus 23 ~~~~~p--~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G-~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~ 99 (713)
+....+ +||+++ ++.||++.. ..++|.+++++. +....+ ...-....||+++ +++||.++|..+ ++++
T Consensus 50 phd~~~ftqGL~~~--~~~Ly~stG---~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~-~v~V 120 (268)
T 3nok_A 50 PHATNAFTQGLVFH--QGHFFESTG---HQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEG-LLFT 120 (268)
T ss_dssp ECCTTCCEEEEEEE--TTEEEEEET---TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSC-EEEE
T ss_pred cCCCccccceEEEE--CCEEEEEcC---CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCC-EEEE
Confidence 344445 799987 589999998 677899999864 444444 2322234567775 689999999877 9999
Q ss_pred EecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEecC--CCCccceeeeeeCCeEEEE
Q psy6570 100 ASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHTE--DNGYKPYKLEVFEDNLYFS 176 (713)
Q Consensus 100 ~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~~--~~~~~p~~i~~~~~~ly~t 176 (713)
++.+......-+... ..+.||+.| +++||++| ++++|+.+|...... ..+.... ..+..+..|.+.+++||+.
T Consensus 121 ~D~~Tl~~~~ti~~~-~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYS-GEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECS-SCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred EECCcCcEEEEEeCC-CceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEE
Confidence 998644333333322 345677776 78999999 589999999866433 2222211 1122344566678899999
Q ss_pred eCCCCcEEEEcccCCCcceeeec
Q psy6570 177 TYRTNNILKINKFGNSDFNVLAN 199 (713)
Q Consensus 177 d~~~~~i~~~~~~~~~~~~~~~~ 199 (713)
.|..+.|.+|++..+.....+..
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEEC
T ss_pred ECCCCeEEEEeCCCCcEEEEEEC
Confidence 99999999999988776665544
No 134
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=7.2e-07 Score=87.23 Aligned_cols=173 Identities=11% Similarity=0.111 Sum_probs=114.8
Q ss_pred ccCCceeEEEccCcccEEecCCCCC--ceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 4 ISSGNVTRVKREMNLKTVLSNLHDP--RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~~~~~~~~p--~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
...++|.++++.+.+.+....-..+ +||+++ +++||++.+ ..++|+++|++......-+... ..+.+|+.|
T Consensus 72 G~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw---~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~D- 144 (268)
T 3nok_A 72 GHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTW---TEGLLFTWSGMPPQRERTTRYS-GEGWGLCYW- 144 (268)
T ss_dssp TTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEES---SSCEEEEEETTTTEEEEEEECS-SCCCCEEEE-
T ss_pred CCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEc---cCCEEEEEECCcCcEEEEEeCC-CceeEEecC-
Confidence 3456688888886532211122334 556664 789999999 7899999998754433333333 456788876
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeC-----CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDN-----NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-----~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~ 156 (713)
.++||.+| +.+ +|+.++........-+.. .+..++.|.+. +++||++.+..+.|.++|.........+..
T Consensus 145 -g~~L~vSd-Gs~-~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 145 -NGKLVRSD-GGT-MLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp -TTEEEEEC-SSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred -CCEEEEEC-CCC-EEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 68999999 555 899998776443332221 24456777776 789999999999999999865444333322
Q ss_pred C-----------CCCccceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 157 E-----------DNGYKPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 157 ~-----------~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
. ....-+.||+++ .++||+|...=.+++++..
T Consensus 220 ~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 220 SALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp HHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred CCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 1 012356788887 6789999866667777654
No 135
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.78 E-value=4.6e-09 Score=84.17 Aligned_cols=65 Identities=31% Similarity=0.816 Sum_probs=54.2
Q ss_pred cCCC-CCCCCCcEeccCCCCccccCCCCCc--CCCCc-cCCCCC--CCCCCeeecCCCCCeecCCCCccCCC
Q psy6570 417 QCLN-LKCQNGGVCVNKTTGLECDCPKFYY--GKNCQ-YSQCKN--YCVNGECSITDSGPKCMCSPGYSGKK 482 (713)
Q Consensus 417 ~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~--g~~C~-~~~C~~--~~~~~~C~~~~~~~~C~C~~G~~g~~ 482 (713)
+|.. .+|.+ ++|+++.++|+|.|++||. |..|+ +++|.. .|.++.|.++.++|+|.|++||+|+.
T Consensus 7 eC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 7 ECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred cCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence 5664 67875 8999999999999999997 88897 788862 37778999999999999999998764
No 136
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.77 E-value=5.8e-09 Score=89.58 Aligned_cols=89 Identities=28% Similarity=0.575 Sum_probs=62.8
Q ss_pred CCCCCCCC--------CCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCC--CCCCCcEEeecCCCce
Q psy6570 505 GKKCDTCT--------CLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPN--YCSNNGTCVLIEGKPS 574 (713)
Q Consensus 505 g~~C~~~~--------C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~--~C~~~~~C~~~~g~~~ 574 (713)
+++|...| |.++++|++..++|+|.|++||+|..|+.... .++|... .|.+ +|+++.++|+
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~-------~~~C~~~~~~C~~--~C~n~~g~y~ 76 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS-------FLNCSLDNGGCTH--YCLEEVGWRR 76 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECC-------SSSSSSGGGGCSS--EEEECSSSEE
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCc-------CCcCcCCCCCCCC--EeECCCCCEE
Confidence 34565556 88999999999999999999999999985421 2466633 3543 9999999999
Q ss_pred eeCCCCCc----CCCCCcCCCCCCCCCCCCCCCeEec
Q psy6570 575 CKCLPPYS----GKQCTEREDSPSCHNYCDNAGLCSY 607 (713)
Q Consensus 575 C~C~~G~~----G~~C~~~~~~~~C~~~C~~~g~C~~ 607 (713)
|.|++||+ |+.|++. -..+|.+.+.|+.
T Consensus 77 C~C~~G~~~~~~g~~C~~~-----~~~pC~~~~~~i~ 108 (114)
T 1aut_L 77 CSCAPGYKLGDDLLQCHPA-----VKFPCGRPWKRME 108 (114)
T ss_dssp EECCTTEEECTTSSCEEEC-----SSSCTTCCC----
T ss_pred eECCCCeeECCCCCccCcC-----cccCCCCCCccCC
Confidence 99999999 4556543 1345766666654
No 137
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=5e-07 Score=87.68 Aligned_cols=163 Identities=12% Similarity=0.000 Sum_probs=108.9
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
.-+||++|. ++||.+... .....|.+++++... ...+.........||+++ +++||..+|..+ ++++++++.-
T Consensus 22 ftqGL~~~~--~~LyestG~-~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~-~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGE-TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH-EGFVYDLATL 95 (243)
T ss_dssp CEEEEEEET--TEEEEEECC-TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS-EEEEEETTTT
T ss_pred ccccEEEEC--CEEEEECCC-CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC-EEEEEECCcC
Confidence 346999984 899998751 124689999997544 333332222234566665 789999999877 9999998654
Q ss_pred CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEecC--CCCccceeeeeeCCeEEEEeCCCCc
Q psy6570 106 NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHTE--DNGYKPYKLEVFEDNLYFSTYRTNN 182 (713)
Q Consensus 106 ~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~~--~~~~~p~~i~~~~~~ly~td~~~~~ 182 (713)
....-+... ..+.||+-| +++||++| ++++|+.+|...... ..+.... ..+.....|...+++||...|.++.
T Consensus 96 ~~~~ti~~~-~~Gwglt~d--g~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYP-GEGWALTSD--DSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECS-SCCCEEEEC--SSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTE
T ss_pred cEEEEEeCC-CCceEEeeC--CCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCe
Confidence 333333322 245566655 88999999 488999999866433 2222211 1122334566678999999999999
Q ss_pred EEEEcccCCCcceeeec
Q psy6570 183 ILKINKFGNSDFNVLAN 199 (713)
Q Consensus 183 i~~~~~~~~~~~~~~~~ 199 (713)
|.+|++..+.....+..
T Consensus 172 I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDL 188 (243)
T ss_dssp EEEECTTTCBEEEEEEC
T ss_pred EEEEECCCCCEEEEEEC
Confidence 99999988876666543
No 138
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.77 E-value=1.1e-06 Score=92.77 Aligned_cols=198 Identities=9% Similarity=0.011 Sum_probs=119.9
Q ss_pred ceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCCce-EEEEEcC-C-----CCC
Q psy6570 8 NVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEGRK-KRTLLNT-G-----LNE 73 (713)
Q Consensus 8 ~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G~~-~~~l~~~-~-----~~~ 73 (713)
.|+.+++.+.+.+. +.....| +|++.+.+++||+++... ...+.|.++++.... ...+... . ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 67888887644222 4444568 999999999999998410 024678899886433 3333211 0 256
Q ss_pred cceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEE-EeC---------------------------------------
Q psy6570 74 PYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNL-VDN--------------------------------------- 113 (713)
Q Consensus 74 p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l-~~~--------------------------------------- 113 (713)
|.+|+++|..++||+++......|.+++ +....... +..
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~ 205 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG 205 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecc
Confidence 9999999999999999754222566555 32211100 000
Q ss_pred ---------------------------------------------C-----------CCCCee---EEEeCCCCeEEEEc
Q psy6570 114 ---------------------------------------------N-----------IQWPTG---ITIDYPSQRLYWAD 134 (713)
Q Consensus 114 ---------------------------------------------~-----------~~~p~g---lavd~~~~~LY~~d 134 (713)
. ...|.+ +++++++++||++.
T Consensus 206 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 206 AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 0 001344 77777778888874
Q ss_pred C---------CCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CC-eEEEEeCCCCcEEEEcccCCCcceeeecccc
Q psy6570 135 P---------KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--ED-NLYFSTYRTNNILKINKFGNSDFNVLANNLN 202 (713)
Q Consensus 135 ~---------~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~-~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~ 202 (713)
. ..+.|+.+|+....+...+.. ...|.+|++. +. .||++.+..+.|..++..+......+..-..
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~---g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~ 362 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISL---GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS 362 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEEC---CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCC
Confidence 3 235788888765443222222 2246666665 55 6787777789999999877766655333235
Q ss_pred ccccEEEE
Q psy6570 203 RASDVLIL 210 (713)
Q Consensus 203 ~~~~i~v~ 210 (713)
.|..|.+.
T Consensus 363 ~P~~~~~~ 370 (373)
T 2mad_H 363 GPQVLSVM 370 (373)
T ss_pred CCcEEEEc
Confidence 56666543
No 139
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.76 E-value=1.4e-07 Score=102.00 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=90.3
Q ss_pred CcccCCceeEEEcc-CcccEEe--c-------CCCCCceEEEecc---CCeEEEeecCCC---------CCCeEEEEecC
Q psy6570 2 ASISSGNVTRVKRE-MNLKTVL--S-------NLHDPRGVAVDWV---GKNLYWTDAGGR---------SSNNIMVSTLE 59 (713)
Q Consensus 2 ad~~~~~I~~~~~~-~~~~~~~--~-------~~~~p~gla~D~~---~~~ly~td~~~~---------~~~~I~~~~~~ 59 (713)
++...++|++++.. +...++. . +...+.|||+++. ++.||+++.... ...+|.+++++
T Consensus 43 ~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~ 122 (454)
T 1cru_A 43 TERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYN 122 (454)
T ss_dssp EETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEE
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEEC
Confidence 33444578888764 3333321 1 2233459999986 899999986200 03589998875
Q ss_pred Cc-----eEEEEEc----CCCCCcceEEEcCCCCcEEEEccC-------------------------------CCCeEEE
Q psy6570 60 GR-----KKRTLLN----TGLNEPYDIALEPLSGRMFWTELG-------------------------------IKPRISG 99 (713)
Q Consensus 60 G~-----~~~~l~~----~~~~~p~~iavD~~~~~ly~td~~-------------------------------~~~~I~~ 99 (713)
+. ..++|+. .....+.+|++++ +|+||++... ..++|+|
T Consensus 123 ~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlR 201 (454)
T 1cru_A 123 KSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLR 201 (454)
T ss_dssp TTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEE
T ss_pred CCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEE
Confidence 42 2334442 2246689999997 7899998421 1358999
Q ss_pred EecCCCC----------cEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC
Q psy6570 100 ASIDGKN----------KFNLVDNNIQWPTGITIDYPSQRLYWADPKA 137 (713)
Q Consensus 100 ~~~dG~~----------~~~l~~~~~~~p~glavd~~~~~LY~~d~~~ 137 (713)
++.||+. +..++...+..|.||++|+ +++||++|...
T Consensus 202 i~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~ 248 (454)
T 1cru_A 202 LNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGP 248 (454)
T ss_dssp ECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECS
T ss_pred EeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCC
Confidence 9999983 2345566899999999998 69999998543
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.76 E-value=3e-07 Score=95.19 Aligned_cols=183 Identities=10% Similarity=-0.007 Sum_probs=122.9
Q ss_pred cccCCceeEEEcc--CcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC--CceEEEEEc-CCCCCcc
Q psy6570 3 SISSGNVTRVKRE--MNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE--GRKKRTLLN-TGLNEPY 75 (713)
Q Consensus 3 d~~~~~I~~~~~~--~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~--G~~~~~l~~-~~~~~p~ 75 (713)
+..++.|..++++ +..+.+ ......|.+|++++.++.||++.. ..+.|.+++++ +...+.+.. .....|.
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (343)
T 1ri6_A 11 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR---PEFRVLAYRIAPDDGALTFAAESALPGSLT 87 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET---TTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred CCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec---CCCeEEEEEecCCCCceeeccccccCCCCc
Confidence 3557888888885 322222 455678999999999888999987 55788887776 333222211 1124899
Q ss_pred eEEEcCCCCcEEEEccCCCCeEEEEecC-CCCcEEEE-eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC-CceeE
Q psy6570 76 DIALEPLSGRMFWTELGIKPRISGASID-GKNKFNLV-DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG-KDRFV 152 (713)
Q Consensus 76 ~iavD~~~~~ly~td~~~~~~I~~~~~d-G~~~~~l~-~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g-~~~~~ 152 (713)
.|+++|.+++||++..... .|...+++ |...+.+. ......|.++++++.+++||+++...++|..++++. .....
T Consensus 88 ~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYNAG-NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEECTTSSEEEEEETTTT-EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred EEEEcCCCCEEEEEecCCC-eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 9999998888999986544 67777773 32222222 234556899999998889999997788899888765 32222
Q ss_pred EE---ecCCCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 153 VY---HTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 153 ~~---~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
+. ........|.++++. +.+||+++...+.|..++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 11 111112356666665 55799998788888888764
No 141
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.75 E-value=5.3e-07 Score=94.99 Aligned_cols=163 Identities=12% Similarity=0.123 Sum_probs=105.1
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC--CceEEE-EEc--CCCCCcceEEEcCCCCcEEEEccCCCCeEE
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE--GRKKRT-LLN--TGLNEPYDIALEPLSGRMFWTELGIKPRIS 98 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~--G~~~~~-l~~--~~~~~p~~iavD~~~~~ly~td~~~~~~I~ 98 (713)
....|.++++++.++.||+++. ..++|.+++++ |+...+ .+. .....|.+|+++|..++||+++...+ .|.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~---~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~ 218 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADL---TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN-RIC 218 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEET---TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT-EEE
T ss_pred CCCcceEEEECCCCCEEEEEcC---CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC-eEE
Confidence 4567999999999888999997 57899999986 443221 121 11367999999998889999986555 777
Q ss_pred EEecC---CCCc---EEEEeC--CC---C-------CCeeEE-EeCCCCeEEEEcCCCC-----cEEEEeCC--CCceeE
Q psy6570 99 GASID---GKNK---FNLVDN--NI---Q-------WPTGIT-IDYPSQRLYWADPKAR-----TIESINLN--GKDRFV 152 (713)
Q Consensus 99 ~~~~d---G~~~---~~l~~~--~~---~-------~p~gla-vd~~~~~LY~~d~~~~-----~I~~~~~~--g~~~~~ 152 (713)
+.+++ |+.. +.+... .+ . .|.+|+ +++++++||+++...+ +|..++++ |....+
T Consensus 219 v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 219 EYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp EEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE
T ss_pred EEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe
Confidence 77665 3221 112111 11 2 488999 9999999999986554 77777764 332221
Q ss_pred E--EecCCCCccceeeee---eCCeEEEEeCCCCcEEEEcccC
Q psy6570 153 V--YHTEDNGYKPYKLEV---FEDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 153 ~--~~~~~~~~~p~~i~~---~~~~ly~td~~~~~i~~~~~~~ 190 (713)
. ..........+.++. ++++||+++...+.|..++...
T Consensus 299 ~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 299 LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred eeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 1 111111223333444 5678999987777777766543
No 142
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.72 E-value=1.9e-09 Score=95.47 Aligned_cols=75 Identities=29% Similarity=0.776 Sum_probs=28.0
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCC-CCCC---CCCCCCCeEecCCCCcceeecCCCcc----c
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDS-PSCH---NYCDNAGLCSYSKQGKPVCTCVNGWS----G 623 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~-~~C~---~~C~~~g~C~~~~~g~~~C~C~~G~~----G 623 (713)
+++|.+++|.++|+|++..++|+|.|++||+|..|+.. + ++|. ..|.+ +|++.. ++|.|.|++||+ |
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~--i~d~C~~~~~~C~~--~C~~~~-g~y~C~C~~Gy~l~~~g 116 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF--TRKLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNG 116 (134)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEET-TEEEEECCTTEEECTTS
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccC--CCCccccCCCCCCC--EeECCC-CCEEEECCCCcEECCCC
Confidence 57899999999999999999999999999999999863 2 5572 35765 899876 899999999999 8
Q ss_pred CCCCcCCC
Q psy6570 624 ITCSERVS 631 (713)
Q Consensus 624 ~~C~~~~~ 631 (713)
..|+++++
T Consensus 117 ~~C~~~~~ 124 (134)
T 2vh0_B 117 KACIPTGP 124 (134)
T ss_dssp SCEEESSS
T ss_pred CccCcCCC
Confidence 88877543
No 143
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.72 E-value=9e-09 Score=92.39 Aligned_cols=76 Identities=32% Similarity=0.702 Sum_probs=58.4
Q ss_pred CCCcCCCCCCC-CCCCCCCCeEecCCCCcceeecCCCcccCCCCcCCCCC---CCCCCCCee-cCCCCccCCCCCceeeC
Q psy6570 585 QCTEREDSPSC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCA---HFCFNGGTC-REQNYSLDPDLKPICIC 659 (713)
Q Consensus 585 ~C~~~~~~~~C-~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~~~~~C~---~~C~~~~~C-~~~~~~~~~~~~~~C~C 659 (713)
.|.++ ++| .++|.++|+|++.. ++|.|.|++||+|..|++.++|. ..|.+ +| + +..++|+|.|
T Consensus 44 ~c~di---deC~~~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~------n~~g~y~C~C 111 (146)
T 1x7a_L 44 QYVDG---DQCEPNPCLNGGLCKDDI-NSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKT------GADSKVLCSC 111 (146)
T ss_dssp ---------CCSSCSSCTTCEEEECS-SCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCC------CSSSCCCCBC
T ss_pred cCCCc---CcCCCCCCCCCCEeECCC-CCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCC------CCCCCEEeEc
Confidence 45554 788 78899999999887 89999999999999999988886 24544 66 4 3567799999
Q ss_pred CCCcc----cCCCCccc
Q psy6570 660 PRGYA----GVRCQTLV 672 (713)
Q Consensus 660 ~~Gy~----G~~C~~~~ 672 (713)
++||+ |..|+...
T Consensus 112 ~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 112 TTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp CTTEEECTTSSSEEECS
T ss_pred CCCcEeCCCCCcCCCCC
Confidence 99999 88997654
No 144
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.72 E-value=5.6e-09 Score=99.68 Aligned_cols=103 Identities=30% Similarity=0.772 Sum_probs=75.4
Q ss_pred CCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCC----CCCCCCCcEEeecCCCceeeCCCC------
Q psy6570 511 CTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCT----PNYCSNNGTCVLIEGKPSCKCLPP------ 580 (713)
Q Consensus 511 ~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~----~~~C~~~~~C~~~~g~~~C~C~~G------ 580 (713)
..|.++|+|+. +.|.|++||+|..|++......-......|. ..+|+++|+|+. .+|.|.+|
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 46888999984 5899999999999996532210000001233 457999999983 47999999
Q ss_pred CcCCCCCcCCCCCCCCC----CCCCC--CeEecCCCCcceeecCCCcccCCCCc
Q psy6570 581 YSGKQCTEREDSPSCHN----YCDNA--GLCSYSKQGKPVCTCVNGWSGITCSE 628 (713)
Q Consensus 581 ~~G~~C~~~~~~~~C~~----~C~~~--g~C~~~~~g~~~C~C~~G~~G~~C~~ 628 (713)
|+|..|+.. ...|.. +|.++ |+|.. .+|.|.+||+|..|+.
T Consensus 168 ~~G~~Ce~~--~~~C~~~~g~~C~~~~~G~C~~-----g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 168 IYGQYCECD--TINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEGSACQH 214 (217)
T ss_dssp EESTTSCEE--SSCSCEETTEETTCTTTEEEET-----TEEEECTTEESTTSCE
T ss_pred EECCCcccC--CccCCCCCCCCCCCCCCcEEeC-----CeeECCCCCccCCcCC
Confidence 589999842 256733 59888 99984 2699999999999975
No 145
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.71 E-value=4.1e-09 Score=94.42 Aligned_cols=75 Identities=33% Similarity=0.749 Sum_probs=61.1
Q ss_pred CCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCc---EEeecCC-CceeeCCCCC
Q psy6570 506 KKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNG---TCVLIEG-KPSCKCLPPY 581 (713)
Q Consensus 506 ~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~---~C~~~~g-~~~C~C~~G~ 581 (713)
+.|...||.++++|++..++|+|.|++||+|..|+.. +++|...+|.+++ +|+++.+ +|+|.|++||
T Consensus 48 d~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~---------~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 48 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETH---------KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp CGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEE---------GGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTE
T ss_pred CcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccC---------ccccccccCCCCCccCEeECCCCCCEEEECCCCc
Confidence 4566779999999999999999999999999999853 2344333344444 9999999 9999999999
Q ss_pred c----CCCCCcC
Q psy6570 582 S----GKQCTER 589 (713)
Q Consensus 582 ~----G~~C~~~ 589 (713)
+ |..|++.
T Consensus 119 ~l~~dG~~C~~~ 130 (142)
T 2c4f_L 119 SLLADGVSCTPT 130 (142)
T ss_dssp EECTTSSCEEES
T ss_pred eECCCCCCCCCC
Confidence 9 8888875
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.71 E-value=6.9e-07 Score=92.16 Aligned_cols=169 Identities=11% Similarity=-0.009 Sum_probs=112.2
Q ss_pred CcccCCceeEEEccCcccEE-ecCCC---CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEE-EEEcCCC----C
Q psy6570 2 ASISSGNVTRVKREMNLKTV-LSNLH---DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR-TLLNTGL----N 72 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~-~~~~~---~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~-~l~~~~~----~ 72 (713)
+....++|..+++.+...+. +..-. .|.++++++.++.||++.. ..+.|.++++...... .+..... .
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---KSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---TTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC---CCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 44567889999987643222 33223 5999999998889999987 6789999998654433 3332211 2
Q ss_pred CcceEEEcCCCCcEEEEccC----------CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEE
Q psy6570 73 EPYDIALEPLSGRMFWTELG----------IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIES 142 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~----------~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~ 142 (713)
.|.+|+++|..++||+++.. ....|.+.++++......+.. -..|.++++++.+++||++ .+.|+.
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~ 158 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHV 158 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEE
Confidence 79999999988899998521 123899999876544444432 3468999999988899999 367999
Q ss_pred EeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeC
Q psy6570 143 INLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178 (713)
Q Consensus 143 ~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~ 178 (713)
+++............. ...|..+..++..||++..
T Consensus 159 ~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 193 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQS-WEAETYAQPDVLAVWNQHE 193 (337)
T ss_dssp EETTTTEEEEEECSTT-TTTTTBCCCBCCCCCCCCT
T ss_pred EECCCCcEeeeeeccc-cCCCceeCCCccEEeeecc
Confidence 9987654433332211 1234455555555555443
No 147
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.71 E-value=3.8e-09 Score=85.80 Aligned_cols=69 Identities=29% Similarity=0.725 Sum_probs=57.4
Q ss_pred CCCCCCCC--CCCCcEEeecCCCceeeCCCCCc----CCCCCcCCCCCCC-CCCCCCCCeEecCCCCcceeecCCCcccC
Q psy6570 552 ANKCTPNY--CSNNGTCVLIEGKPSCKCLPPYS----GKQCTEREDSPSC-HNYCDNAGLCSYSKQGKPVCTCVNGWSGI 624 (713)
Q Consensus 552 ~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~~~C-~~~C~~~g~C~~~~~g~~~C~C~~G~~G~ 624 (713)
+++|..++ | ++++|+++.++|+|.|++||+ |..|+++ ++| ..+|. ++|++.. ++|.|.|+ ||.|.
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di---deC~~~~C~--~~C~n~~-g~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI---DECSENMCA--QLCVNYP-GGYTCYCD-GKKGF 74 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC---CHHHHSCCS--SEECCCS-SSCCEECC-SSSCC
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCc---CeeCCCCCC--CEEEccC-CCEEEECC-CCcCC
Confidence 67888776 8 788999999999999999999 7889754 888 67786 6999887 89999997 66666
Q ss_pred CCCc
Q psy6570 625 TCSE 628 (713)
Q Consensus 625 ~C~~ 628 (713)
.++.
T Consensus 75 ~~~~ 78 (87)
T 1z6c_A 75 KLAQ 78 (87)
T ss_dssp BCCT
T ss_pred cccC
Confidence 5543
No 148
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.69 E-value=4.6e-07 Score=93.89 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=108.5
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
....++++++|+.++.|||++. ..+.|.++++++...+.+.. . ..|.+|++++ ++.||++.. . .|++++++
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~---~~~~i~~~d~~~~~~~~~~~-~-~~v~~i~~~~-dg~l~v~~~--~-gl~~~d~~ 117 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNI---LERELHELHLASGRKTVHAL-P-FMGSALAKIS-DSKQLIASD--D-GLFLRDTA 117 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEG---GGTEEEEEETTTTEEEEEEC-S-SCEEEEEEEE-TTEEEEEET--T-EEEEEETT
T ss_pred CCCCCcCCeEeCCCCEEEEEEC---CCCEEEEEECCCCcEEEEEC-C-CcceEEEEeC-CCeEEEEEC--C-CEEEEECC
Confidence 3456899999998899999998 67899999998876554432 2 5789999997 567777653 3 69999987
Q ss_pred CCCcEEEEeCC----CCCCeeEEEeCCCCeEEEEcC------CCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CC
Q psy6570 104 GKNKFNLVDNN----IQWPTGITIDYPSQRLYWADP------KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--ED 171 (713)
Q Consensus 104 G~~~~~l~~~~----~~~p~glavd~~~~~LY~~d~------~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~ 171 (713)
+...+.+.... ...++++++|+ .++||+++. ....|++++ +|... .+... ...|.++++. +.
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~~~---~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLFAD---ISIPNSICFSPDGT 191 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEEEE---ESSEEEEEECTTSC
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-EeeCC---CcccCCeEEcCCCC
Confidence 66555554321 24588999996 567888874 246899998 65433 23222 3356677665 45
Q ss_pred eEEEEeCCCCcEEEEccc
Q psy6570 172 NLYFSTYRTNNILKINKF 189 (713)
Q Consensus 172 ~ly~td~~~~~i~~~~~~ 189 (713)
.|||++...+.|++++..
T Consensus 192 ~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEETTTCEEEEEEBC
T ss_pred EEEEEECCCCEEEEEEcc
Confidence 799999888899999864
No 149
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.69 E-value=1.5e-06 Score=96.69 Aligned_cols=190 Identities=7% Similarity=-0.037 Sum_probs=129.2
Q ss_pred CcccCCceeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC---CceEEEEEcCCCCCcceE
Q psy6570 2 ASISSGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE---GRKKRTLLNTGLNEPYDI 77 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~---G~~~~~l~~~~~~~p~~i 77 (713)
+...+++|..++..+.+.+ .+.....|+++++++.++.||+++. .+.|.++++. ++....+. .+ ..|.+|
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~----dg~V~viD~~~~t~~~v~~i~-~G-~~P~~i 245 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEPTTVAEIK-IG-SEARSI 245 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCCEEEEEE-CC-SEEEEE
T ss_pred EeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC----CCeEEEEECCCCCCcEeEEEe-cC-CCCcee
Confidence 3445678889998875432 2445567999999999999999874 5789999994 44443333 33 569999
Q ss_pred EEc----CCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC-----------CCCCeeEEEeCCCCeEEEEcCCCCcEEE
Q psy6570 78 ALE----PLSGRMFWTELGIKPRISGASIDGKNKFNLVDNN-----------IQWPTGITIDYPSQRLYWADPKARTIES 142 (713)
Q Consensus 78 avD----~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~-----------~~~p~glavd~~~~~LY~~d~~~~~I~~ 142 (713)
+++ |..++||+++...+ .|.+++.........+... ..++.+|.+.+....+|++....++|+.
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~-~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPP-QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETT-EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEccccCCCCCEEEEEEccCC-eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 999 57789999987766 7888875543333333321 1134678887777778888888999999
Q ss_pred EeCCCCceeEEEe-cCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 143 INLNGKDRFVVYH-TEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 143 ~~~~g~~~~~~~~-~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
+++.......+.. ......+..+++.++.++|+++...++|..++...+.....+.
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 9986643222221 1112334455666678899999989999999987665444443
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.68 E-value=1.1e-06 Score=97.72 Aligned_cols=186 Identities=9% Similarity=-0.052 Sum_probs=126.8
Q ss_pred cccCCceeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEec--C-CceEEEEEcCCCCCcceEE
Q psy6570 3 SISSGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL--E-GRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 3 d~~~~~I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~--~-G~~~~~l~~~~~~~p~~ia 78 (713)
....+.|..++..+.+.+ .+.....|+++++++.++.||+++. . +.|.++++ . ++....+. . ...|.+|+
T Consensus 155 ~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~---d-~~V~v~D~~~~t~~~~~~i~-~-g~~p~~va 228 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR---D-ARIDMIDLWAKEPTKVAEIK-I-GIEARSVE 228 (543)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET---T-SEEEEEETTSSSCEEEEEEE-C-CSEEEEEE
T ss_pred EcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC---C-CeEEEEECcCCCCcEEEEEe-c-CCCcceEE
Confidence 345677888887754321 2332334899999999999999987 4 89999999 3 33333333 3 36799999
Q ss_pred EcC----CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC-----------CCCCeeEEEeCCCCeEEEEcCCCCcEEEE
Q psy6570 79 LEP----LSGRMFWTELGIKPRISGASIDGKNKFNLVDNN-----------IQWPTGITIDYPSQRLYWADPKARTIESI 143 (713)
Q Consensus 79 vD~----~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~-----------~~~p~glavd~~~~~LY~~d~~~~~I~~~ 143 (713)
++| .+++||+++.... .|..++.........+... -.++.+|++++..+++|++....++|+.+
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~-~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vv 307 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPP-QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV 307 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESS-EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred eCCCcCCCCCEEEEEEccCC-eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEE
Confidence 999 8889999986545 7877776544333333321 12567899998899999999999999999
Q ss_pred eCCCCc-eeE-EEecCCCCccceeeee--eCCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 144 NLNGKD-RFV-VYHTEDNGYKPYKLEV--FEDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 144 ~~~g~~-~~~-~~~~~~~~~~p~~i~~--~~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
++.... ..+ .... ...|.++.+ ++.+||++....+.|..++...+.....+.
T Consensus 308 d~~~~~~l~~~~i~~---~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 308 NYKDIDNLTVTSIGA---APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp ECTTSSSCEEEEEEC---CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EecCCCcceeEEecc---CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 986533 221 1111 234544554 566799998888899999877665444443
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.68 E-value=2.5e-06 Score=89.37 Aligned_cols=159 Identities=13% Similarity=0.084 Sum_probs=106.3
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC--ceE---EEEEcCC---------CCCcceEEEcCCCCcEEEE
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--RKK---RTLLNTG---------LNEPYDIALEPLSGRMFWT 89 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G--~~~---~~l~~~~---------~~~p~~iavD~~~~~ly~t 89 (713)
....|..|++ .++.||+++. ..+.|.+++++. ... ..+...+ ...|.+++++|..++||++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~---~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANY---SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEET---TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEE--CCCEEEEEEC---CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 4567889998 4678999987 677888888753 221 1111111 2345789999987789999
Q ss_pred ccCCCCeEEEEecCCCCc-------------EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec
Q psy6570 90 ELGIKPRISGASIDGKNK-------------FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 90 d~~~~~~I~~~~~dG~~~-------------~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~ 156 (713)
+.+.. .|.+.+++.... ..+.......|.++++++++++||+++...++|..++++....+.+...
T Consensus 173 ~~~~~-~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 173 DLGTD-QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp ETTTT-EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred eCCCC-EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 98766 788777764331 1222234557899999998889999998888999988864433333221
Q ss_pred ---CCCCccceeeeee--CCeEEEEeCC-CCcEEEEcc
Q psy6570 157 ---EDNGYKPYKLEVF--EDNLYFSTYR-TNNILKINK 188 (713)
Q Consensus 157 ---~~~~~~p~~i~~~--~~~ly~td~~-~~~i~~~~~ 188 (713)
......|.+|++. +.+||+++.. .+.|..++.
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 1122345666664 6679999877 677766554
No 152
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.67 E-value=5.3e-07 Score=94.40 Aligned_cols=197 Identities=7% Similarity=-0.064 Sum_probs=120.6
Q ss_pred ceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCCceE-EEEEcC-C-----CCC
Q psy6570 8 NVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEGRKK-RTLLNT-G-----LNE 73 (713)
Q Consensus 8 ~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G~~~-~~l~~~-~-----~~~ 73 (713)
+|+.+|+++.+.+- +.....| +|++++.+++||+++... ...+.|.++|+..... ..+... . ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 67788888754222 4444568 999999999999998410 0357899999876443 333222 1 257
Q ss_pred cceEEEcCCCCcEEEEccCCCCeEEE--EecC----------------C---------CCcEE-----------------
Q psy6570 74 PYDIALEPLSGRMFWTELGIKPRISG--ASID----------------G---------KNKFN----------------- 109 (713)
Q Consensus 74 p~~iavD~~~~~ly~td~~~~~~I~~--~~~d----------------G---------~~~~~----------------- 109 (713)
|.+|+++|.+++||+++......|.+ +++. | ..+..
T Consensus 126 P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~ 205 (368)
T 1mda_H 126 VHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ 205 (368)
T ss_dssp TTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC
T ss_pred cceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEE
Confidence 99999999999999997642214444 2220 0 00000
Q ss_pred -----------------------------EEeC---------CC-----------CCCee---EEEeCCCCeEEEEcC--
Q psy6570 110 -----------------------------LVDN---------NI-----------QWPTG---ITIDYPSQRLYWADP-- 135 (713)
Q Consensus 110 -----------------------------l~~~---------~~-----------~~p~g---lavd~~~~~LY~~d~-- 135 (713)
++.. .+ ..|.+ ++++++.++||++..
T Consensus 206 ~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~ 285 (368)
T 1mda_H 206 CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp SCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred eeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc
Confidence 0000 00 02344 788888888998754
Q ss_pred -C-----CCcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeC-CCCcEEEEcccCCCcceeeecccccccc
Q psy6570 136 -K-----ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTY-RTNNILKINKFGNSDFNVLANNLNRASD 206 (713)
Q Consensus 136 -~-----~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 206 (713)
+ .+.+..+|+....+...+.. ...|.+|++. +.+||++.. ..+.|..++.........+..+ ..|.+
T Consensus 286 ~~~~~~~~~~~~ViD~~t~~vv~~i~v---g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~ 361 (368)
T 1mda_H 286 SRSCLAAAENTSSVTASVGQTSGPISN---GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPES 361 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCCEEECCEE---EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCE
T ss_pred cCcccccCCCEEEEECCCCeEEEEEEC---CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCE
Confidence 2 23556777655432221111 2367888775 457999988 6899999998776665555433 55666
Q ss_pred EEE
Q psy6570 207 VLI 209 (713)
Q Consensus 207 i~v 209 (713)
|.+
T Consensus 362 i~~ 364 (368)
T 1mda_H 362 LSV 364 (368)
T ss_dssp EEC
T ss_pred EEe
Confidence 644
No 153
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.64 E-value=4.6e-09 Score=98.24 Aligned_cols=73 Identities=27% Similarity=0.729 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCC-CCCCC--CCCCCCcEEeecCCCceeeCCCCCc
Q psy6570 506 KKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLA-NKCTP--NYCSNNGTCVLIEGKPSCKCLPPYS 582 (713)
Q Consensus 506 ~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~-~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~ 582 (713)
+.|...||.++|+|++..++|+|.|++||+|..|+.. + ++|.. .+|.+ +|++..|+|+|.|++||+
T Consensus 43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~---------i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF---------TRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred cccCCCCCCCCCEeECCCCCeeEeCCCCceecccccc---------ccccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence 5677789999999999999999999999999999854 3 56875 35754 999999999999999999
Q ss_pred ----CCCCCcC
Q psy6570 583 ----GKQCTER 589 (713)
Q Consensus 583 ----G~~C~~~ 589 (713)
|..|+..
T Consensus 112 l~~dG~~C~~~ 122 (195)
T 1nfu_B 112 LADNGKACIPT 122 (195)
T ss_dssp ECTTSSCEEES
T ss_pred eCCCCCccccC
Confidence 8889865
No 154
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.64 E-value=1.1e-08 Score=82.94 Aligned_cols=67 Identities=27% Similarity=0.713 Sum_probs=53.6
Q ss_pred CCCCCCC--CCCCcEEcCCCCCeeccCCCCCC-----CCCCcccCCCCCCCCCCCCCCCCC--CCCCcEEeecCCCceee
Q psy6570 506 KKCDTCT--CLNGGTCIPNSKNNVCKCPSQYT-----GRRCECAVGDTSCASLANKCTPNY--CSNNGTCVLIEGKPSCK 576 (713)
Q Consensus 506 ~~C~~~~--C~~~g~C~~~~~~~~C~C~~g~~-----G~~C~~~~~~~~c~~~~~~C~~~~--C~~~~~C~~~~g~~~C~ 576 (713)
++|...+ |.+ ++|+++.++|+|.|++||+ |..|+ + +++|...+ |. +++|+++.|+|+|.
T Consensus 4 deC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-d---------ideC~~~~~~C~-~~~C~n~~g~y~C~ 71 (86)
T 1lmj_A 4 DECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-D---------IDECQRDPLLCR-GGVCHNTEGSYRCE 71 (86)
T ss_dssp CTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-E---------CCHHHHCSSTTT-TSEEEEETTEEEEE
T ss_pred ccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-C---------cccccCCCCcCC-CCEeEcCCCCEEEE
Confidence 3455434 865 5999999999999999998 56665 2 57887655 75 58999999999999
Q ss_pred CCCCCcCC
Q psy6570 577 CLPPYSGK 584 (713)
Q Consensus 577 C~~G~~G~ 584 (713)
|++||++.
T Consensus 72 C~~G~~~~ 79 (86)
T 1lmj_A 72 CPPGHQLS 79 (86)
T ss_dssp SCTTSCCC
T ss_pred CcCCcccC
Confidence 99999875
No 155
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.63 E-value=7.6e-09 Score=87.32 Aligned_cols=76 Identities=24% Similarity=0.521 Sum_probs=35.2
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCCCC--CCCCCcEEeecCCCceeeCCCCCcC---CCCCcCCCCCCCC--CCCCCC
Q psy6570 530 CPSQYTGRRCECAVGDTSCASLANKCTPN--YCSNNGTCVLIEGKPSCKCLPPYSG---KQCTEREDSPSCH--NYCDNA 602 (713)
Q Consensus 530 C~~g~~G~~C~~~~~~~~c~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~G---~~C~~~~~~~~C~--~~C~~~ 602 (713)
...+|.|..|+ +++|..+ .|. ++|+++.++|+|.|++||+| ..|+++ ++|. .+|.
T Consensus 18 ~~~~~~~~~Cd-----------~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~di---deC~~~~~C~-- 79 (107)
T 2w2n_E 18 TENLYFQGAMG-----------TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQDPDTCS-- 79 (107)
T ss_dssp --CCCCSCCBS-----------CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC----------------
T ss_pred cCCCcCCCCCc-----------CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccc---cccCCCCCcC--
Confidence 34678888775 4677643 463 58999999999999999997 789855 8883 6786
Q ss_pred CeEecCCCCcceeecCCCcccC
Q psy6570 603 GLCSYSKQGKPVCTCVNGWSGI 624 (713)
Q Consensus 603 g~C~~~~~g~~~C~C~~G~~G~ 624 (713)
++|++.. ++|.|.|++||++.
T Consensus 80 ~~C~n~~-gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 80 QLCVNLE-GGYKCQCEEGFQLD 100 (107)
T ss_dssp ----------------------
T ss_pred CeeecCC-CCEEEECCCCceEC
Confidence 6999886 99999999999864
No 156
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.62 E-value=7.1e-09 Score=91.79 Aligned_cols=73 Identities=27% Similarity=0.737 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCC-CCCCCC--CCCCCcEEeecCCCceeeCCCCCc
Q psy6570 506 KKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLA-NKCTPN--YCSNNGTCVLIEGKPSCKCLPPYS 582 (713)
Q Consensus 506 ~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~-~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~ 582 (713)
+.|...||.++++|++..++|+|.|++||+|..|+.. + ++|... +|.+ +|+++.|+|+|.|++||+
T Consensus 43 d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~---------i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF---------TRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred CcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccC---------CCCccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence 4677778999999999999999999999999999853 3 567653 5654 999999999999999999
Q ss_pred ----CCCCCcC
Q psy6570 583 ----GKQCTER 589 (713)
Q Consensus 583 ----G~~C~~~ 589 (713)
|..|++.
T Consensus 112 l~~~g~~C~~~ 122 (134)
T 2vh0_B 112 LADNGKACIPT 122 (134)
T ss_dssp ECTTSSCEEES
T ss_pred ECCCCCccCcC
Confidence 8888765
No 157
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.62 E-value=2e-06 Score=89.14 Aligned_cols=162 Identities=9% Similarity=-0.009 Sum_probs=107.9
Q ss_pred ecC-CCCCceEEEeccCCeEEEeecCC---------CCCCeEEEEecCC---ceEEEEEcCC-----CCCcceEEEcCC-
Q psy6570 22 LSN-LHDPRGVAVDWVGKNLYWTDAGG---------RSSNNIMVSTLEG---RKKRTLLNTG-----LNEPYDIALEPL- 82 (713)
Q Consensus 22 ~~~-~~~p~gla~D~~~~~ly~td~~~---------~~~~~I~~~~~~G---~~~~~l~~~~-----~~~p~~iavD~~- 82 (713)
+.+ ...|+.|++++ ++.+|.+-..- ...++|++++++. +..+..+... .-+|.||.+.+.
T Consensus 45 i~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 45 VKGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD 123 (355)
T ss_dssp CTTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT
T ss_pred eCCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC
Confidence 455 46799999997 68999985100 1368899999973 3333222221 248999999652
Q ss_pred --CCcEEEEccCC-CCeEEEEecCCC-CcEEEEe----CCCCCCeeEEEeCCCCeEEEEcC-----------------CC
Q psy6570 83 --SGRMFWTELGI-KPRISGASIDGK-NKFNLVD----NNIQWPTGITIDYPSQRLYWADP-----------------KA 137 (713)
Q Consensus 83 --~~~ly~td~~~-~~~I~~~~~dG~-~~~~l~~----~~~~~p~glavd~~~~~LY~~d~-----------------~~ 137 (713)
+.+||+.+... ..+|+.++++-. ...+++. ..+..|+.+++|+ .+++|+++. ..
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCc
Confidence 34799998762 346666555432 2333332 3578999999995 578777753 24
Q ss_pred CcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccC
Q psy6570 138 RTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 138 ~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~ 190 (713)
++|++++.. ..+++... +..|.||++. +..||++|...++|++++...
T Consensus 203 g~vyr~d~~--~~~~~~~~---l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN--DVRVVAEG---FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT--CCEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEECC--eEEEeecC---CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 678888873 44455544 5567777765 668999999999999998653
No 158
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.59 E-value=2.9e-06 Score=85.49 Aligned_cols=183 Identities=11% Similarity=0.042 Sum_probs=126.8
Q ss_pred CcccCCceeEEEccCcccEE-ecC--CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 2 ASISSGNVTRVKREMNLKTV-LSN--LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~~-~~~--~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
++..+++|+.+++.+.+.+- +.. ...++++++++. ++||++. .+.|..++++|+.+..+.......+..++
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs~-----~~~V~~~d~~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFSY-----SKGAKMITRDGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEEC-----BSEEEEECTTSCEEEEEECCTTCEEEEEE
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEeC-----CCCEEEECCCCCEEEEEcCCCCccccccE
Confidence 45678899999984432221 222 146899999976 5666643 46799999998876665432223455677
Q ss_pred EcCCCCcEEEEccC-CCCeEEEEecCCCCcEEEEeC-C----CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeE
Q psy6570 79 LEPLSGRMFWTELG-IKPRISGASIDGKNKFNLVDN-N----IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFV 152 (713)
Q Consensus 79 vD~~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~-~----~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~ 152 (713)
+.+ +|.+++++.+ .. +|+.++.+|+....+-.. . ...|.++++++ ++.+++++...++|..++.+|..+-.
T Consensus 84 ~~~-dG~~lv~~~~~~~-~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 84 ILP-DGNALVAWCGHPS-TILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLLNS 160 (276)
T ss_dssp ECT-TSCEEEEEESTTE-EEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ECC-CCCEEEEecCCCC-EEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEEEE
Confidence 774 7888888876 55 899999999876655421 1 23577888885 56777889889999999999765544
Q ss_pred EEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 153 VYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 153 ~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
+... ..|+++.+. ++.+++++...++|+.+++.++..+-.+
T Consensus 161 ~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 161 VKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 4332 356666665 6789999888889999998866554444
No 159
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.59 E-value=3.3e-06 Score=90.70 Aligned_cols=186 Identities=14% Similarity=0.098 Sum_probs=127.6
Q ss_pred ccCCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 4 ISSGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
..++.|..+++++... .+......|.++++++.++.||++.. ..+.|.+.+++.......+.. ...|.+++++|
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~ 263 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW---ISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSK 263 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET---TTTEEEEEETTTTEEEEECCC-CSEEEEEEECT
T ss_pred CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec---CCCcEEEEECCCCcEEEEecC-CCCceEEEEcC
Confidence 3457788888776432 22334567899999999899999987 678999999875544333322 35689999999
Q ss_pred CCCcEEEEccCC------CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEe
Q psy6570 82 LSGRMFWTELGI------KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 82 ~~~~ly~td~~~------~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~ 155 (713)
.+++||++.... .+.|.+.++........+. ....|.++++++.+++||++....++|..++++.........
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 877888877532 3378888887554333332 123688999998888999999889999999998654433333
Q ss_pred cCCCCccceeeeee--CCeEEEEeCCC--------------CcEEEEcccCCCcceee
Q psy6570 156 TEDNGYKPYKLEVF--EDNLYFSTYRT--------------NNILKINKFGNSDFNVL 197 (713)
Q Consensus 156 ~~~~~~~p~~i~~~--~~~ly~td~~~--------------~~i~~~~~~~~~~~~~~ 197 (713)
. ...+.++++. +..||++.... +.|+.++...+.....+
T Consensus 343 ~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 343 V---FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp C---SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred C---CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 2 3456677765 45688887653 37888876555444333
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.59 E-value=2e-06 Score=90.55 Aligned_cols=160 Identities=15% Similarity=0.059 Sum_probs=102.6
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEec--CCceEEEEEcCCCCCcceEEEcCCCCc--EEEEc------cC-
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL--EGRKKRTLLNTGLNEPYDIALEPLSGR--MFWTE------LG- 92 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~--~G~~~~~l~~~~~~~p~~iavD~~~~~--ly~td------~~- 92 (713)
....|..|++++.++.||+++. . .|.++++ +|+...+........|..++++|.+++ ||.++ .+
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~---~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAM---K--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEB---T--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEcc---c--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 4458999999999888999987 4 7777776 454433222111235889999987664 34444 11
Q ss_pred ----CCCeEEEEecC--CCCcEEEEe---CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC-CCceeEEEecC--CCC
Q psy6570 93 ----IKPRISGASID--GKNKFNLVD---NNIQWPTGITIDYPSQRLYWADPKARTIESINLN-GKDRFVVYHTE--DNG 160 (713)
Q Consensus 93 ----~~~~I~~~~~d--G~~~~~l~~---~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-g~~~~~~~~~~--~~~ 160 (713)
..+.|...+++ |.....+.. .....|.++++++++++||+++...++|+.++++ ......+.... ...
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 22255555554 543333321 2356799999999988999999888899999986 33333222211 013
Q ss_pred ccceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 161 YKPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 161 ~~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
..|.++++. +.+||+++...+.|..++.
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 457777765 5589998877777766543
No 161
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.58 E-value=1.1e-08 Score=86.27 Aligned_cols=71 Identities=30% Similarity=0.620 Sum_probs=27.6
Q ss_pred CccCCCCCCCCCCCC-----cEEcCCCCCeeccCCCCCCC---CCCcccCCCCCCCCCCCCCCC-CCCCCCcEEeecCCC
Q psy6570 502 GYSGKKCDTCTCLNG-----GTCIPNSKNNVCKCPSQYTG---RRCECAVGDTSCASLANKCTP-NYCSNNGTCVLIEGK 572 (713)
Q Consensus 502 G~~g~~C~~~~C~~~-----g~C~~~~~~~~C~C~~g~~G---~~C~~~~~~~~c~~~~~~C~~-~~C~~~~~C~~~~g~ 572 (713)
||.++.|+..+|..+ ++|++..++|+|.|++||+| ..|+ + +++|.. .+|. ++|+++.|+
T Consensus 21 ~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-d---------ideC~~~~~C~--~~C~n~~gs 88 (107)
T 2w2n_E 21 LYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-D---------IDECQDPDTCS--QLCVNLEGG 88 (107)
T ss_dssp CCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C-------------------------------
T ss_pred CcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-c---------ccccCCCCCcC--CeeecCCCC
Confidence 444444444444321 38999999999999999998 6676 2 678873 6785 799999999
Q ss_pred ceeeCCCCCcCC
Q psy6570 573 PSCKCLPPYSGK 584 (713)
Q Consensus 573 ~~C~C~~G~~G~ 584 (713)
|+|.|++||.+.
T Consensus 89 y~C~C~~Gy~~~ 100 (107)
T 2w2n_E 89 YKCQCEEGFQLD 100 (107)
T ss_dssp ------------
T ss_pred EEEECCCCceEC
Confidence 999999999864
No 162
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.58 E-value=1.7e-06 Score=90.46 Aligned_cols=203 Identities=12% Similarity=0.098 Sum_probs=117.3
Q ss_pred CCceeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCCceEE-EEEcCC------C
Q psy6570 6 SGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEGRKKR-TLLNTG------L 71 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G~~~~-~l~~~~------~ 71 (713)
.++|+.+|..+.+.+ .+.....|. |++++.+++||++++.. ...+.|.++|....... .+.... .
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g 136 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVG 136 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccC
Confidence 578888888765422 144455685 99999999999998410 02456999998765533 332111 2
Q ss_pred CCcceEEEcCCCCcEEEEccC-CCCeEEEEecCCCCcE----------------------------EEEeC-C-------
Q psy6570 72 NEPYDIALEPLSGRMFWTELG-IKPRISGASIDGKNKF----------------------------NLVDN-N------- 114 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~-~~~~I~~~~~dG~~~~----------------------------~l~~~-~------- 114 (713)
..|.+|+++|..++||+++.. .+ .|.++++...... .++.. .
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~-~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAP-AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSC-EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCC-eEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEe
Confidence 479999999999999999754 33 5555544322111 00100 0
Q ss_pred ---CC----CCe--eEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC--------C----CCccceeeeeeCCeE
Q psy6570 115 ---IQ----WPT--GITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE--------D----NGYKPYKLEVFEDNL 173 (713)
Q Consensus 115 ---~~----~p~--glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~--------~----~~~~p~~i~~~~~~l 173 (713)
+. .|. .++++...+++||... .++|+.+++.+...+++.... . ....+++++-+.++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ecceeccccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 00 111 1344444555555333 467888887766544332211 0 122346666668899
Q ss_pred EEEeC---------CCCcEEEEcccCCCcceeeeccccccccEEEEee
Q psy6570 174 YFSTY---------RTNNILKINKFGNSDFNVLANNLNRASDVLILQE 212 (713)
Q Consensus 174 y~td~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~ 212 (713)
|++.. ..++|+.++.........+..+ ..+.+|.+...
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D 341 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQD 341 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSS
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCC
Confidence 99863 2367999988776665555443 23445555443
No 163
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.58 E-value=2.5e-08 Score=80.95 Aligned_cols=68 Identities=26% Similarity=0.688 Sum_probs=55.1
Q ss_pred CCCCCCC--CCCCcEEcCCCCCeeccCCCCCC----CCCCcccCCCCCCCCCCCCCCCCCCCCCcEEeecCCCceeeCCC
Q psy6570 506 KKCDTCT--CLNGGTCIPNSKNNVCKCPSQYT----GRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLP 579 (713)
Q Consensus 506 ~~C~~~~--C~~~g~C~~~~~~~~C~C~~g~~----G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~ 579 (713)
++|...+ | ++++|+++.++|+|.|++||+ |..|+ + +++|..++|. ++|+++.|+|+|.|+
T Consensus 4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-d---------ideC~~~~C~--~~C~n~~g~y~C~C~- 69 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-D---------IDECSENMCA--QLCVNYPGGYTCYCD- 69 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-C---------CCHHHHSCCS--SEECCCSSSCCEECC-
T ss_pred ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-C---------cCeeCCCCCC--CEEEccCCCEEEECC-
Confidence 3455445 8 778999999999999999998 66775 2 6789888896 799999999999997
Q ss_pred CCcCCCCC
Q psy6570 580 PYSGKQCT 587 (713)
Q Consensus 580 G~~G~~C~ 587 (713)
||.|..+.
T Consensus 70 g~~G~~~~ 77 (87)
T 1z6c_A 70 GKKGFKLA 77 (87)
T ss_dssp SSSCCBCC
T ss_pred CCcCCccc
Confidence 66666554
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.54 E-value=8e-06 Score=84.04 Aligned_cols=183 Identities=9% Similarity=0.034 Sum_probs=114.7
Q ss_pred ccCCceeEEEccCcccEE-ecCCC------CCceEEEeccCCeEEEeecCC-----C---CCCeEEEEecCCceEEEEEc
Q psy6570 4 ISSGNVTRVKREMNLKTV-LSNLH------DPRGVAVDWVGKNLYWTDAGG-----R---SSNNIMVSTLEGRKKRTLLN 68 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~~-~~~~~------~p~gla~D~~~~~ly~td~~~-----~---~~~~I~~~~~~G~~~~~l~~ 68 (713)
...+.|..+++.+...+. +.... .|.++++++.++.||+++.+. . ..+.|.++++++......+.
T Consensus 53 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 53 NKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp TTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 345678888877643221 22222 799999999888999996210 0 13789999987655444443
Q ss_pred CCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE-------------------------------------
Q psy6570 69 TGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLV------------------------------------- 111 (713)
Q Consensus 69 ~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~------------------------------------- 111 (713)
. ...|.+|+++|..++||+++ . .|++.+++.......+
T Consensus 133 ~-~~~~~~~~~s~dg~~l~~~~---~-~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 133 A-PRQITMLAWARDGSKLYGLG---R-DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp C-CSSCCCEEECTTSSCEEEES---S-SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred C-CCCcceeEECCCCCEEEEeC---C-eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 3 35799999999888898883 1 4555554432111111
Q ss_pred -----------------e------------CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 112 -----------------D------------NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 112 -----------------~------------~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
. .....|.+|++++++++||++ .+.|+.++++.......... ...
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~---~~~ 281 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPL---PHS 281 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEEC---SSC
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecC---CCc
Confidence 0 011245678999888889988 47899999876544333322 235
Q ss_pred ceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 163 PYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 163 p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
|.++++. +.+||++ ...+.|..++..++.....+.
T Consensus 282 ~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 282 YYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp CCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEE
T ss_pred eeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEE
Confidence 6667665 4567777 456788888876665544443
No 165
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.53 E-value=5.7e-06 Score=91.97 Aligned_cols=179 Identities=7% Similarity=-0.002 Sum_probs=121.1
Q ss_pred CCceeEEEc--cCccc-EEecCCCCCceEEEec----cCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC-C-------
Q psy6570 6 SGNVTRVKR--EMNLK-TVLSNLHDPRGVAVDW----VGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT-G------- 70 (713)
Q Consensus 6 ~~~I~~~~~--~~~~~-~~~~~~~~p~gla~D~----~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~-~------- 70 (713)
.+.|..+++ .+... ..+.....|++|+|++ .++.||+++. ..+.|.+++.........+.. +
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~---~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY---WPPQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE---ESSEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred CCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc---cCCeEEEEeccccccceeecccCcccCccc
Confidence 377888888 43221 1244556799999999 8899999987 578899988765443333322 1
Q ss_pred ---CCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEE--EEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeC
Q psy6570 71 ---LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFN--LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINL 145 (713)
Q Consensus 71 ---~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~--l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~ 145 (713)
-.++.+|++.+.++.+|++..... +|+.+++....... .+. .-..|.+++|++++++||++....+.|..+++
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g-~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETG-KVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTT-EEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCceEEEEECCCCCEEEEEECCCC-eEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 125778999988888999887666 99999886533222 222 34579999999998899999888889999998
Q ss_pred CCCceeEEEecCCCCccc-eeeee-e--CCeEEEEeC-CCCcEEEEcccC
Q psy6570 146 NGKDRFVVYHTEDNGYKP-YKLEV-F--EDNLYFSTY-RTNNILKINKFG 190 (713)
Q Consensus 146 ~g~~~~~~~~~~~~~~~p-~~i~~-~--~~~ly~td~-~~~~i~~~~~~~ 190 (713)
........+... ..++| .++.+ + .+.+|++.. ..+.|..++...
T Consensus 354 ~tg~l~~~i~~g-~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 354 KDRRLSALVDVG-KTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTTEEEEEEECS-SSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCeEEEeeccC-CCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 655433333322 12343 23333 2 467888765 457788787654
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.53 E-value=2.6e-06 Score=89.52 Aligned_cols=86 Identities=13% Similarity=0.020 Sum_probs=58.9
Q ss_pred CCceeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCCc-eEEEEEcC-----CCC
Q psy6570 6 SGNVTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEGR-KKRTLLNT-----GLN 72 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G~-~~~~l~~~-----~~~ 72 (713)
++.|++++..+.+.+ .+.....| +|++++.+++||+++... ...+.|.++++... ....+... ...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 568889987654322 24444568 999999999999997410 02356899998653 33333211 135
Q ss_pred CcceEEEcCCCCcEEEEccC
Q psy6570 73 EPYDIALEPLSGRMFWTELG 92 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~ 92 (713)
.|.+|+++|..++||+++..
T Consensus 109 ~p~~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp CGGGEEECTTSSEEEEEEES
T ss_pred CcceEEECCCCCEEEEECCC
Confidence 79999999999999998754
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.50 E-value=1.1e-05 Score=83.58 Aligned_cols=139 Identities=13% Similarity=0.032 Sum_probs=93.7
Q ss_pred CcccCCceeEEEccCcccE-EecCCC--CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC------CC
Q psy6570 2 ASISSGNVTRVKREMNLKT-VLSNLH--DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG------LN 72 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~~~-~~~~~~--~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~------~~ 72 (713)
+....++|+.+++.+...+ .+..-. .|.++++++.++.||++.. ..+.|.++++++......+... ..
T Consensus 16 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~ 92 (349)
T 1jmx_B 16 VTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNTFHANLSSVPGEVGR 92 (349)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEESCCSTTEEEE
T ss_pred EeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEEEEEEcccccccccc
Confidence 3445788899998764322 223223 6999999998888999987 6789999998765443333221 23
Q ss_pred CcceEEEcCCCCcEEEEccC-----------CCCeEEEEecCCC---CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCC
Q psy6570 73 EPYDIALEPLSGRMFWTELG-----------IKPRISGASIDGK---NKFNLVDNNIQWPTGITIDYPSQRLYWADPKAR 138 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~-----------~~~~I~~~~~dG~---~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~ 138 (713)
.|.+|+++|.+++||++... .. .|.+.++... .....+. .-..+.+|++++++. ||+++ .
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~---~ 166 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP-RLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG---P 166 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCC-EEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES---S
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCC-eEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc---C
Confidence 48999999988889998743 34 8999988752 2222222 223578899998766 88864 3
Q ss_pred cEEEEeCCCCc
Q psy6570 139 TIESINLNGKD 149 (713)
Q Consensus 139 ~I~~~~~~g~~ 149 (713)
.|+.+++....
T Consensus 167 ~i~~~d~~~~~ 177 (349)
T 1jmx_B 167 DIYKMDVKTGK 177 (349)
T ss_dssp SEEEECTTTCC
T ss_pred cEEEEeCCCCc
Confidence 48888875443
No 168
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.49 E-value=3.3e-06 Score=92.17 Aligned_cols=186 Identities=13% Similarity=0.085 Sum_probs=125.8
Q ss_pred CcccCCceeEEEccCcc--cEE-ecCCCCCceEEEe--ccCCeEEEeecCC--------------CCCCeEEEEecCCce
Q psy6570 2 ASISSGNVTRVKREMNL--KTV-LSNLHDPRGVAVD--WVGKNLYWTDAGG--------------RSSNNIMVSTLEGRK 62 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~~--~~~-~~~~~~p~gla~D--~~~~~ly~td~~~--------------~~~~~I~~~~~~G~~ 62 (713)
+|..+++|.+|+++..+ +++ +.....|+|+++. +.++.||++.... ...+.|.++|.+...
T Consensus 107 nd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 107 NDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred EcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 45668899999999854 222 4455779999984 7899999984210 034578888888644
Q ss_pred EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCC------------------------------------eEEEEecCC--
Q psy6570 63 KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKP------------------------------------RISGASIDG-- 104 (713)
Q Consensus 63 ~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~------------------------------------~I~~~~~dG-- 104 (713)
+..-+..+ ..|.++++++..+++|+|....+. .|.+++...
T Consensus 187 v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~ 265 (595)
T 1fwx_A 187 VAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA 265 (595)
T ss_dssp EEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG
T ss_pred EEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC
Confidence 33222233 379999999999999999855420 133333332
Q ss_pred -CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc----------eeEEEecCCCCccceeeeee-CCe
Q psy6570 105 -KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD----------RFVVYHTEDNGYKPYKLEVF-EDN 172 (713)
Q Consensus 105 -~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~----------~~~~~~~~~~~~~p~~i~~~-~~~ 172 (713)
+.....+. --..|.|+.++|++++||+++...++|.+++++... ..++.... ....|..++++ +++
T Consensus 266 ~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 266 SSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGN 343 (595)
T ss_dssp CCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSE
T ss_pred CceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCe
Confidence 11011111 124799999999999999999999999999987431 11232222 24578888887 459
Q ss_pred EEEEeCCCCcEEEEcccC
Q psy6570 173 LYFSTYRTNNILKINKFG 190 (713)
Q Consensus 173 ly~td~~~~~i~~~~~~~ 190 (713)
+|++....+.|.+++...
T Consensus 344 aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 344 AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEETTTTEEEEEEHHH
T ss_pred EEEEEecCCcEEEEEhhH
Confidence 999999999998887643
No 169
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.48 E-value=1.1e-07 Score=98.11 Aligned_cols=74 Identities=26% Similarity=0.691 Sum_probs=62.1
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCC-cCCCCCCCC----CCCCCCCeEecCCCCcceeecCCCcccC--
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCT-EREDSPSCH----NYCDNAGLCSYSKQGKPVCTCVNGWSGI-- 624 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~-~~~~~~~C~----~~C~~~g~C~~~~~g~~~C~C~~G~~G~-- 624 (713)
+++|.+++|.++++|.+..++|+|.|++||+|+.|+ +. ++|. .+|.+ .|.+.. ++|.|.|++||.|.
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~---~eC~~~~~~~C~~--~C~~~~-g~~~C~C~~g~~~~~~ 78 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK---NECHPERTDGCQH--FCLPGQ-ESYTCSCAQGYRLGED 78 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS---SSCCTTCTTSCSS--EEECCS-SSCEEECCTTEECCTT
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCc---ccCCCCCCCCCcC--ccccCC-CeeEEecccccccccc
Confidence 578999999999999999999999999999999998 44 7883 67976 899876 89999999999864
Q ss_pred --CCCcCCC
Q psy6570 625 --TCSERVS 631 (713)
Q Consensus 625 --~C~~~~~ 631 (713)
.|...++
T Consensus 79 ~~~C~~~~~ 87 (317)
T 3h5c_B 79 HKQCVPHDQ 87 (317)
T ss_dssp SSCCEECSS
T ss_pred ccccccccc
Confidence 4554443
No 170
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.48 E-value=1.4e-05 Score=83.07 Aligned_cols=169 Identities=12% Similarity=0.123 Sum_probs=116.9
Q ss_pred CCceeEEEccCc--ccE--E-ec-C----CCCCceEEEecc-------CCeEEEeecCCCCCCeEEEEecCCc-eEEEEE
Q psy6570 6 SGNVTRVKREMN--LKT--V-LS-N----LHDPRGVAVDWV-------GKNLYWTDAGGRSSNNIMVSTLEGR-KKRTLL 67 (713)
Q Consensus 6 ~~~I~~~~~~~~--~~~--~-~~-~----~~~p~gla~D~~-------~~~ly~td~~~~~~~~I~~~~~~G~-~~~~l~ 67 (713)
..+|..+|+.+. ..+ + ++ . ......|+||.. .+.+|++|. ....|.++++... ..+++-
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~---~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF---LRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET---TTTEEEEEETTTTEEEEEEC
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC---CCCcEEEEECCCCcEEEEcc
Confidence 457888888876 322 1 11 1 223467999921 578999999 6778999998754 444441
Q ss_pred c----C--------C-----CCCcceEEEcCC----CCcEEEEccCCCCeEEEEecC----C---CCcEEEEeCC-CCCC
Q psy6570 68 N----T--------G-----LNEPYDIALEPL----SGRMFWTELGIKPRISGASID----G---KNKFNLVDNN-IQWP 118 (713)
Q Consensus 68 ~----~--------~-----~~~p~~iavD~~----~~~ly~td~~~~~~I~~~~~d----G---~~~~~l~~~~-~~~p 118 (713)
. + + .....+||++|. .+.|||.-.... +++++..+ . ...+.+.... ....
T Consensus 199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~ 277 (381)
T 3q6k_A 199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDA 277 (381)
T ss_dssp GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCE
T ss_pred CCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCc
Confidence 1 1 0 135668999987 789999987766 78888632 2 2233333332 2344
Q ss_pred eeEEEeCCCCeEEEEcCCCCcEEEEeCCC-----CceeEEEecCCCCccceeeeee-CCeEEEEeCC
Q psy6570 119 TGITIDYPSQRLYWADPKARTIESINLNG-----KDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYR 179 (713)
Q Consensus 119 ~glavd~~~~~LY~~d~~~~~I~~~~~~g-----~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~ 179 (713)
.++++|+.++.||+++...+.|.+.+.++ .+..++.... .+..|.+|.++ +++||++...
T Consensus 278 ~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECS
T ss_pred ceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEECc
Confidence 57889877899999999999999999987 3556777666 68899999996 6789987644
No 171
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.47 E-value=1.2e-05 Score=81.88 Aligned_cols=178 Identities=13% Similarity=0.123 Sum_probs=114.1
Q ss_pred cCCceeEEEccCcccEEecCCCCCceEEEeccCC-------eEEEeecCCCC--CCeEEEEecC--CceEEEEE------
Q psy6570 5 SSGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGK-------NLYWTDAGGRS--SNNIMVSTLE--GRKKRTLL------ 67 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~-------~ly~td~~~~~--~~~I~~~~~~--G~~~~~l~------ 67 (713)
+.+-|..++++|+....+.. .+++++.+-+.-. .+|.++. . .++|.++++| ....+.+.
T Consensus 48 k~~gL~Vydl~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R---~~~~n~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 48 KKSGLVVYSLDGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNR---SEGKNTIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp TTTEEEEEETTSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEEC---STTCCEEEEEEECTTTCCEEECSCTTSCE
T ss_pred CCCCEEEEcCCCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCC---CCCCCeEEEEEECCCCCceeeccccccCc
Confidence 34667788887765444443 6778877765211 4688887 6 7888888665 33333331
Q ss_pred cCCCCCcceEEE--cCCCCc--EEEEccCCCCeEEEEec----CCCCcEEEEe--CCCCCCeeEEEeCCCCeEEEEcCCC
Q psy6570 68 NTGLNEPYDIAL--EPLSGR--MFWTELGIKPRISGASI----DGKNKFNLVD--NNIQWPTGITIDYPSQRLYWADPKA 137 (713)
Q Consensus 68 ~~~~~~p~~iav--D~~~~~--ly~td~~~~~~I~~~~~----dG~~~~~l~~--~~~~~p~glavd~~~~~LY~~d~~~ 137 (713)
...+..|.||++ ++..+. +|+++.. ++++...+ +|+....++. ..-..|.|+++|+..++||+++...
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccc
Confidence 144588999999 987775 6666654 36666444 2322223331 1234789999999999999999885
Q ss_pred CcEEEEeCCCC---ceeEEEec-CCCC-ccceeeeee-C----CeEEEEeCCCCcEEEEccc
Q psy6570 138 RTIESINLNGK---DRFVVYHT-EDNG-YKPYKLEVF-E----DNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 138 ~~I~~~~~~g~---~~~~~~~~-~~~~-~~p~~i~~~-~----~~ly~td~~~~~i~~~~~~ 189 (713)
+ ||+++.+.. .++++... ...+ ..+.||+++ . ++|++++.+.+....++..
T Consensus 202 G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 202 A-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp E-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred e-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 5 999996532 23444332 1122 367888875 2 4799998887777777664
No 172
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.46 E-value=2.8e-06 Score=89.54 Aligned_cols=170 Identities=14% Similarity=0.039 Sum_probs=108.3
Q ss_pred CceeEEEccCcccE-EecCCCCCceEE----EeccCCeEEEeecCC---------------CCCCeEEEEecCCceEEEE
Q psy6570 7 GNVTRVKREMNLKT-VLSNLHDPRGVA----VDWVGKNLYWTDAGG---------------RSSNNIMVSTLEGRKKRTL 66 (713)
Q Consensus 7 ~~I~~~~~~~~~~~-~~~~~~~p~gla----~D~~~~~ly~td~~~---------------~~~~~I~~~~~~G~~~~~l 66 (713)
+.|..+|..+.+.+ .+.....|.+++ +.+..+.||.++++. ...++|.+++++.......
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 66778887754322 233333454444 466778899998531 0268999999986543332
Q ss_pred EcCC--CCCcceEEE--cCCCCcEEEEcc-----CCCCeEEEEecCCCCc---EEE-EeC-----C-----------CCC
Q psy6570 67 LNTG--LNEPYDIAL--EPLSGRMFWTEL-----GIKPRISGASIDGKNK---FNL-VDN-----N-----------IQW 117 (713)
Q Consensus 67 ~~~~--~~~p~~iav--D~~~~~ly~td~-----~~~~~I~~~~~dG~~~---~~l-~~~-----~-----------~~~ 117 (713)
+..+ -..|..|++ +|..+++|++.. ... .|++...++... +++ +.. . -..
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss-~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSS-SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCE-EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCc-eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 3222 246888877 998999999886 554 787776664211 111 111 0 246
Q ss_pred CeeEEEeCCCCeEEEEcCCCCcEEEEeCC-CCceeEEEecCCC--------------Cccceeeee--eCCeEEEEe
Q psy6570 118 PTGITIDYPSQRLYWADPKARTIESINLN-GKDRFVVYHTEDN--------------GYKPYKLEV--FEDNLYFST 177 (713)
Q Consensus 118 p~glavd~~~~~LY~~d~~~~~I~~~~~~-g~~~~~~~~~~~~--------------~~~p~~i~~--~~~~ly~td 177 (713)
|.+|.|++++++||++.+..+.|..++++ ....+++..-... ...|..|++ ++.+||+++
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 89999999999999999999999999985 3333433222111 014666665 578999998
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.46 E-value=8.2e-06 Score=82.14 Aligned_cols=175 Identities=11% Similarity=0.036 Sum_probs=118.6
Q ss_pred CCceeEEEccCcccEEecC--CCCCceEEEeccCCeEEEeecCCCC-CCeEEEEecCCceEEEEEcC-C----CCCcceE
Q psy6570 6 SGNVTRVKREMNLKTVLSN--LHDPRGVAVDWVGKNLYWTDAGGRS-SNNIMVSTLEGRKKRTLLNT-G----LNEPYDI 77 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~--~~~p~gla~D~~~~~ly~td~~~~~-~~~I~~~~~~G~~~~~l~~~-~----~~~p~~i 77 (713)
.+.|+.++++++..-.... ...+.++++.+ ++++++++. . ..+|+.++.+|+.+..+... . ...|.++
T Consensus 55 ~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~---~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 55 SKGAKMITRDGRELWNIAAPAGCEMQTARILP-DGNALVAWC---GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQI 130 (276)
T ss_dssp BSEEEEECTTSCEEEEEECCTTCEEEEEEECT-TSCEEEEEE---STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCC
T ss_pred CCCEEEECCCCCEEEEEcCCCCccccccEECC-CCCEEEEec---CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCc
Confidence 3456666665432111121 12344566664 467778887 5 67899999999876655422 1 2357788
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC-CCceeEEEec
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN-GKDRFVVYHT 156 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-g~~~~~~~~~ 156 (713)
++++ +|.+++++.... +|..++++|+.+..+-. -..|.++++. .++.+++++...++|..++.+ |..+-.+...
T Consensus 131 ~~~~-~G~~lv~~~~~~-~v~~~d~~G~~~w~~~~--~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 131 NKNK-KGNYLVPLFATS-EVREIAPNGQLLNSVKL--SGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp EECT-TSCEEEEETTTT-EEEEECTTSCEEEEEEC--SSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred eECC-CCCEEEEecCCC-EEEEECCCCCEEEEEEC--CCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 8885 677888887766 99999999876655543 2468888887 467888998888899999998 7766555433
Q ss_pred C---CCCccceeeeee-CCeEEEEeCC----------CCcEEEEccc
Q psy6570 157 E---DNGYKPYKLEVF-EDNLYFSTYR----------TNNILKINKF 189 (713)
Q Consensus 157 ~---~~~~~p~~i~~~-~~~ly~td~~----------~~~i~~~~~~ 189 (713)
. ..+..|.++.+. ++.||++++. ..+++.+++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~ 252 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSE 252 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTT
T ss_pred CCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCC
Confidence 1 135567888875 7899999863 3357777654
No 174
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.44 E-value=2e-07 Score=96.15 Aligned_cols=69 Identities=30% Similarity=0.751 Sum_probs=60.9
Q ss_pred CCCCCCCCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCC---CCCCCCcEEeecCCCceeeCCCCC
Q psy6570 505 GKKCDTCTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTP---NYCSNNGTCVLIEGKPSCKCLPPY 581 (713)
Q Consensus 505 g~~C~~~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~ 581 (713)
++.|...||.++++|.+..++|+|.|++||.|..|+.+ +++|.. ++|.+ +|++..++|+|.|++||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~---------~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELA---------KNECHPERTDGCQH--FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCC---------SSSCCTTCTTSCSS--EEECCSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccC---------cccCCCCCCCCCcC--ccccCCCeeEEeccccc
Confidence 46788889999999999999999999999999999855 578876 68976 99999999999999999
Q ss_pred cCC
Q psy6570 582 SGK 584 (713)
Q Consensus 582 ~G~ 584 (713)
.|.
T Consensus 74 ~~~ 76 (317)
T 3h5c_B 74 RLG 76 (317)
T ss_dssp ECC
T ss_pred ccc
Confidence 864
No 175
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.43 E-value=1.1e-05 Score=86.56 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=122.9
Q ss_pred cCCceeEEEccCcccEEe-------cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceE
Q psy6570 5 SSGNVTRVKREMNLKTVL-------SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDI 77 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~~-------~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~i 77 (713)
..+.|..+++.+...+.. .....+.++++++ ++.+|++.. ..+.|.+.+++.......+......|..|
T Consensus 142 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 142 EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQM---QANAVHVFDLKTLAYKATVDLTGKWSKIL 217 (433)
T ss_dssp TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEG---GGTEEEEEETTTCCEEEEEECSSSSEEEE
T ss_pred CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEEC---CCCEEEEEECCCceEEEEEcCCCCCeeEE
Confidence 456788888775432221 1122456688864 477888887 67899999987654443333444679999
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC-------CCCcEEEEeCCCCce
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP-------KARTIESINLNGKDR 150 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~-------~~~~I~~~~~~g~~~ 150 (713)
+++|.+++||++..... .|.+.+++.......+. ....|.++++++.+++||++.. ..+.|+.+++.....
T Consensus 218 ~~~~~~~~l~~~~~~~~-~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISE-DISVIDRKTKLEIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EEETTTTEEEEEETTTT-EEEEEETTTTEEEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEcCCCCEEEEEecCCC-cEEEEECCCCcEEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 99998888999886555 89999986543332222 3345899999998889998874 345788999875543
Q ss_pred eEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 151 FVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 151 ~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
...... ...+.++++. ++.||++....+.|..++..++.....
T Consensus 296 ~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 296 IDTIGP---PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKS 340 (433)
T ss_dssp EEEEEE---EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EeeccC---CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEE
Confidence 333322 2245566654 457999988888999988765544333
No 176
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.37 E-value=8.2e-06 Score=86.84 Aligned_cols=112 Identities=9% Similarity=-0.011 Sum_probs=81.1
Q ss_pred cCCeEEEeecCCCCC-CeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccC---------CCCeEEEEecCCC
Q psy6570 36 VGKNLYWTDAGGRSS-NNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELG---------IKPRISGASIDGK 105 (713)
Q Consensus 36 ~~~~ly~td~~~~~~-~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~---------~~~~I~~~~~dG~ 105 (713)
..+++|+++.+.... +.|.++|++...+...+..+ ..| +|+++|..++||++++. .+ .|.+++....
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~-~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTD-YVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECTTTC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCC-EEEEEECCCC
Confidence 457899999831111 79999999876655444444 568 99999999999999852 23 6888877654
Q ss_pred CcE-EEEeC---C---CCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCCCCce
Q psy6570 106 NKF-NLVDN---N---IQWPTGITIDYPSQRLYWADPK-ARTIESINLNGKDR 150 (713)
Q Consensus 106 ~~~-~l~~~---~---~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~g~~~ 150 (713)
... .+... . ...|.+|+|++++++||++... .+.|..+|+.....
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 433 23221 1 3579999999999999999864 78899999876543
No 177
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.36 E-value=1.8e-05 Score=83.49 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=119.7
Q ss_pred CcccCCceeEEEccCc----c--cEE-------ecCCCCCceEEEeccCCeEEEeecCCC---CCCeEEEEecCCceEEE
Q psy6570 2 ASISSGNVTRVKREMN----L--KTV-------LSNLHDPRGVAVDWVGKNLYWTDAGGR---SSNNIMVSTLEGRKKRT 65 (713)
Q Consensus 2 ad~~~~~I~~~~~~~~----~--~~~-------~~~~~~p~gla~D~~~~~ly~td~~~~---~~~~I~~~~~~G~~~~~ 65 (713)
+...+++|+.++.... + +++ ..++..|+++..-+.+ ||++..+.. ..+.|.++|.++.....
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEE
T ss_pred ccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEE
Confidence 3456889999997643 1 222 1255689999998764 999877421 23789999988555443
Q ss_pred EEcCC---CCCcceEEEcCCCCcEEEEccC------------------CCCeEEEEecCCCCcEEEEeCC--CCCCeeEE
Q psy6570 66 LLNTG---LNEPYDIALEPLSGRMFWTELG------------------IKPRISGASIDGKNKFNLVDNN--IQWPTGIT 122 (713)
Q Consensus 66 l~~~~---~~~p~~iavD~~~~~ly~td~~------------------~~~~I~~~~~dG~~~~~l~~~~--~~~p~gla 122 (713)
.+..+ ...+.++.+.|..+.||.++|+ .+ +|.+.+++.......+... -..|..|+
T Consensus 179 ~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d-~V~v~D~~~~k~~~tI~vg~~g~~P~~i~ 257 (462)
T 2ece_A 179 KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGN-RIHFWDLRKRKRIHSLTLGEENRMALELR 257 (462)
T ss_dssp ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCC-EEEEEETTTTEEEEEEESCTTEEEEEEEE
T ss_pred EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCC-EEEEEECCCCcEeeEEecCCCCCccceeE
Confidence 33322 1234457778888889999865 45 8999999864222222221 13577776
Q ss_pred E--eCCCCeEEEEcC-----CCCcEEEEeCCCCcee---EEEecCC----C-----------Cccceeeee--eCCeEEE
Q psy6570 123 I--DYPSQRLYWADP-----KARTIESINLNGKDRF---VVYHTED----N-----------GYKPYKLEV--FEDNLYF 175 (713)
Q Consensus 123 v--d~~~~~LY~~d~-----~~~~I~~~~~~g~~~~---~~~~~~~----~-----------~~~p~~i~~--~~~~ly~ 175 (713)
+ ++..+++|++.. .++.|+++.+++...+ ++..... . ...|.+|.+ ++.+||+
T Consensus 258 f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYV 337 (462)
T 2ece_A 258 PLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYL 337 (462)
T ss_dssp ECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEE
T ss_pred eeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEE
Confidence 7 999999999988 8888888777653211 1100000 0 134555554 5779999
Q ss_pred EeCCCCcEEEEccc
Q psy6570 176 STYRTNNILKINKF 189 (713)
Q Consensus 176 td~~~~~i~~~~~~ 189 (713)
+++..+.|..++..
T Consensus 338 Snrg~d~VavfdV~ 351 (462)
T 2ece_A 338 SLWGIGEVRQYDIS 351 (462)
T ss_dssp EETTTTEEEEEECS
T ss_pred EeCCCCEEEEEEec
Confidence 99999999988864
No 178
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.31 E-value=3.8e-07 Score=65.65 Aligned_cols=38 Identities=24% Similarity=0.676 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCCcEEe-----ecCCCceeeCCCCCcCCCCCcC
Q psy6570 552 ANKCTPNYCSNNGTCV-----LIEGKPSCKCLPPYSGKQCTER 589 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~G~~C~~~ 589 (713)
+++|.++||.++|+|. +..++|+|.|++||+|+.|+..
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 6899999999999994 4567899999999999999853
No 179
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.30 E-value=3.2e-05 Score=79.93 Aligned_cols=177 Identities=10% Similarity=0.033 Sum_probs=108.1
Q ss_pred ccCCceeEEEccCcccEE-ecC-------CCCCceEEEeccCCeEEEeecCCCC-----------CCeEEEEecCCce-E
Q psy6570 4 ISSGNVTRVKREMNLKTV-LSN-------LHDPRGVAVDWVGKNLYWTDAGGRS-----------SNNIMVSTLEGRK-K 63 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~~~-~~~-------~~~p~gla~D~~~~~ly~td~~~~~-----------~~~I~~~~~~G~~-~ 63 (713)
...+.|+.+++.+...+. +.. ...|.++++++.++.||++.. . .+.|.+.++.... .
T Consensus 62 ~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 62 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN---PTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE---EEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc---cccccccccccCCCeEEEEECCCcccc
Confidence 346778888887643322 221 233899999999899999885 2 4789999987522 1
Q ss_pred E--EEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC---------------------------
Q psy6570 64 R--TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNN--------------------------- 114 (713)
Q Consensus 64 ~--~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~--------------------------- 114 (713)
+ ..... ...+.+|+++|... ||+++. .|++.++........+...
T Consensus 139 ~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 139 KPVRTFPM-PRQVYLMRAADDGS-LYVAGP----DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp CCSEEEEC-CSSCCCEEECTTSC-EEEESS----SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred ceeeeccC-CCcccceeECCCCc-EEEccC----cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEe
Confidence 1 12222 23688899997655 888542 3666666433322222111
Q ss_pred -----------------------------------------CCCCeeEEEeC-CCCeEEEEcCCCCcEEEEeCCCCceeE
Q psy6570 115 -----------------------------------------IQWPTGITIDY-PSQRLYWADPKARTIESINLNGKDRFV 152 (713)
Q Consensus 115 -----------------------------------------~~~p~glavd~-~~~~LY~~d~~~~~I~~~~~~g~~~~~ 152 (713)
-..|.++++++ ++++||++ .++|+.+++.......
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEE
Confidence 01455677778 78889888 6789999987654433
Q ss_pred EEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 153 VYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 153 ~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
.... ...|.++++. +++||++. ..+.|..++...+..+..
T Consensus 290 ~~~~---~~~~~~~~~s~dg~~l~~~~-~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 290 AANL---DHTYYCVAFDKKGDKLYLGG-TFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp EEEC---SSCCCEEEECSSSSCEEEES-BSSEEEEEETTTTEEEEE
T ss_pred EEcC---CCCccceEECCCCCEEEEec-CCCeEEEEeccccceeee
Confidence 3322 2245566654 56788864 457888888765544333
No 180
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=1.5e-05 Score=86.96 Aligned_cols=206 Identities=11% Similarity=0.049 Sum_probs=132.5
Q ss_pred cCCceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCCCC----------------------------------
Q psy6570 5 SSGNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRS---------------------------------- 49 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~---------------------------------- 49 (713)
..+.+..+|.++.+.+- +.--.+|.++++++.++.+|++......
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 35577788888643211 2222389999999999999999863200
Q ss_pred CCeEEEEecCC---ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCC---------c-EEEEeC-CC
Q psy6570 50 SNNIMVSTLEG---RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKN---------K-FNLVDN-NI 115 (713)
Q Consensus 50 ~~~I~~~~~~G---~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~---------~-~~l~~~-~~ 115 (713)
.+.|.++|... +.....+..+ ..|.++++.|.++++|+++...+ +|.+++++... + .++... .-
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~-~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSP-TVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSS-BEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred ECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCC-eEEEEECcccccccccccCcccceEEEcCCC
Confidence 12366666553 2201122222 68999999999999999998877 99999887321 1 122221 23
Q ss_pred CCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC--------ceeEEEecCCCCccc------ee--eeeeCCeEEEEeCC
Q psy6570 116 QWPTGITIDYPSQRLYWADPKARTIESINLNGK--------DRFVVYHTEDNGYKP------YK--LEVFEDNLYFSTYR 179 (713)
Q Consensus 116 ~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~--------~~~~~~~~~~~~~~p------~~--i~~~~~~ly~td~~ 179 (713)
..|.+++||+++ ++|++....+.|.+++++.. ...++..... ..+| .+ +..++.+||.++..
T Consensus 331 ~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 331 LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp SCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEEcCCC
Confidence 469999999876 99999999999999997651 1233322221 2222 33 34568899999977
Q ss_pred C-CcE-----------EEEcccCCCcceeeec--cccccccEEEEeeccc
Q psy6570 180 T-NNI-----------LKINKFGNSDFNVLAN--NLNRASDVLILQENKQ 215 (713)
Q Consensus 180 ~-~~i-----------~~~~~~~~~~~~~~~~--~~~~~~~i~v~~~~~q 215 (713)
+ +++ ..++. .+..++++.. ....|.+..+++..+.
T Consensus 409 skdr~~~~gp~~~~~~ql~di-s~~~m~lv~d~p~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 409 SKDRFLNVGPLKPENDQLIDI-SGDKMVLVHDGPTFAEPHDAIAVHPSIL 457 (595)
T ss_dssp CTTSSCCCCSSCCEEEEEEEC-SSSSCEEEEEEEESSCCCCEEEECTTTT
T ss_pred CccccccCCCCCCCcceEEEc-CCCcEEEEEEEcCCCCCCceEEccHHHc
Confidence 6 665 55555 3445555533 2567788888776544
No 181
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.20 E-value=1.3e-06 Score=58.49 Aligned_cols=36 Identities=31% Similarity=0.688 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCC
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCT 587 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 587 (713)
+++|.+++|.++|+|++..++|+|.|++||+|..|+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 578888899999999998889999999999998885
No 182
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.20 E-value=4e-05 Score=80.13 Aligned_cols=115 Identities=10% Similarity=0.027 Sum_probs=82.0
Q ss_pred EeccCCeEEEeecCC-CCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccC---------CCCeEEEEec
Q psy6570 33 VDWVGKNLYWTDAGG-RSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELG---------IKPRISGASI 102 (713)
Q Consensus 33 ~D~~~~~ly~td~~~-~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~---------~~~~I~~~~~ 102 (713)
.++..++||++|... ...+.|.++|++.......+..+ ..|. |+++|..++||++++. .+ .|.++++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~-~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTD-YVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCC-EEEEEEC
Confidence 346789999999820 11579999998865554444444 4585 9999999999999842 22 5788877
Q ss_pred CCCCcEEEEeCC-------CCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCCCCce
Q psy6570 103 DGKNKFNLVDNN-------IQWPTGITIDYPSQRLYWADPK-ARTIESINLNGKDR 150 (713)
Q Consensus 103 dG~~~~~l~~~~-------~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~g~~~ 150 (713)
.......-+... ...|.+|+|++++++||++... .+.|..+|+.....
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 654433222211 2479999999999999999864 78899999876543
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.19 E-value=0.00013 Score=81.09 Aligned_cols=181 Identities=9% Similarity=0.038 Sum_probs=117.4
Q ss_pred CCceeEEEcc--CcccE-EecCCCCCceEEEe----ccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC-C-------
Q psy6570 6 SGNVTRVKRE--MNLKT-VLSNLHDPRGVAVD----WVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT-G------- 70 (713)
Q Consensus 6 ~~~I~~~~~~--~~~~~-~~~~~~~p~gla~D----~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~-~------- 70 (713)
.+.|..+++. +...+ .+.....|++|+++ +.++.||+++. ..+.|.+++.........+.. +
T Consensus 217 dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~---~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 217 DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY---WPPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE---ETTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc---cCCeEEEEECCCCcEEEEEecccccccccc
Confidence 5678899984 32211 14445679999999 58889999998 778999998765443333322 1
Q ss_pred ---CCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 71 ---LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 71 ---~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
..++.+|++.+.+..+|++..... +|+.++........+.. ..-..|.++.||+++.+||++....++|..+|+.
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~~~g-~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVKETG-KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTT-EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred ccCCCceEEEEEcCCCCEEEEEecCCC-eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 114457777766566666654444 89999876543222221 1335688999999999999999999999999987
Q ss_pred CCceeEEEecCCCCccc-eeeee-e--CCeEEEEeC-CCCcEEEEcccC
Q psy6570 147 GKDRFVVYHTEDNGYKP-YKLEV-F--EDNLYFSTY-RTNNILKINKFG 190 (713)
Q Consensus 147 g~~~~~~~~~~~~~~~p-~~i~~-~--~~~ly~td~-~~~~i~~~~~~~ 190 (713)
..............++| .++.+ + .+.+|++.. +.+.|..++...
T Consensus 373 t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 373 EGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 65443333320124555 35543 2 356776653 557888887654
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.14 E-value=0.00013 Score=76.81 Aligned_cols=148 Identities=7% Similarity=-0.059 Sum_probs=92.7
Q ss_pred eccCCeEEEeec-CCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccC--------CCCeEEEEecCC
Q psy6570 34 DWVGKNLYWTDA-GGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELG--------IKPRISGASIDG 104 (713)
Q Consensus 34 D~~~~~ly~td~-~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~--------~~~~I~~~~~dG 104 (713)
.+..+.+|++|. +......|.+++++.......+..+ ..| +|++.|..++||+++.. ....|.++++..
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 345678999986 2110118899998754443334444 468 99999999999999742 112688888763
Q ss_pred CCcEEEEeCC-------CCCCeeEEEeCCCCeEEEEcCC-CCcEEEEeCCCCceeEEEe-cCCCCccceeeeeeCCeEEE
Q psy6570 105 KNKFNLVDNN-------IQWPTGITIDYPSQRLYWADPK-ARTIESINLNGKDRFVVYH-TEDNGYKPYKLEVFEDNLYF 175 (713)
Q Consensus 105 ~~~~~l~~~~-------~~~p~glavd~~~~~LY~~d~~-~~~I~~~~~~g~~~~~~~~-~~~~~~~p~~i~~~~~~ly~ 175 (713)
.....-+... ...|.+++|++++++||++... .+.|..++ +.... +.. .. ......+..++.++|+
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~--~~~~~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLS--SPTCYHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcC--CCceEEEEeCCCceEE
Confidence 3222222111 2468999999999999999865 68899998 65433 222 11 1122223334556777
Q ss_pred EeCCCCcEEEEcc
Q psy6570 176 STYRTNNILKINK 188 (713)
Q Consensus 176 td~~~~~i~~~~~ 188 (713)
+.+..+++..++.
T Consensus 182 ~~~~dg~~~~vd~ 194 (373)
T 2mad_H 182 LLCAQGGLAKTDH 194 (373)
T ss_pred EEcCCCCEEEEEC
Confidence 7777777766665
No 185
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.14 E-value=9.6e-05 Score=73.91 Aligned_cols=177 Identities=10% Similarity=-0.025 Sum_probs=114.0
Q ss_pred ccCCceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC-ceEEEEEcCC-CCCcceEEEc
Q psy6570 4 ISSGNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG-RKKRTLLNTG-LNEPYDIALE 80 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G-~~~~~l~~~~-~~~p~~iavD 80 (713)
...+.|+.+++.+.. +.+......+..+++.+.+..|+++. .+.|.+.++++ .....+.... ...+..+++.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-----EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-----TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-----CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 346778888887654 33344456688999999887777654 35899999987 5555444322 2456789999
Q ss_pred CCCCcEEEEccC--CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCC--cEEEEeCCCCceeEEEec
Q psy6570 81 PLSGRMFWTELG--IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKAR--TIESINLNGKDRFVVYHT 156 (713)
Q Consensus 81 ~~~~~ly~td~~--~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~--~I~~~~~~g~~~~~~~~~ 156 (713)
|...+|+++... ...+|+.+++++...+.+.. ......+++++.+.+|+++....+ +|+.+++++.....+...
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 988888887632 23489999988776555432 233678899998888887654334 677777776555444332
Q ss_pred CCCCccceeeee--eCCeEEEEeC--CCCcEEEEcccC
Q psy6570 157 EDNGYKPYKLEV--FEDNLYFSTY--RTNNILKINKFG 190 (713)
Q Consensus 157 ~~~~~~p~~i~~--~~~~ly~td~--~~~~i~~~~~~~ 190 (713)
......+++ ++..|+++.. ....|+.++..+
T Consensus 172 ---~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 172 ---EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp ---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ---CCccccceECCCCCEEEEEecCCCCccEEEECCCC
Confidence 223344444 3556776643 345566666443
No 186
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.07 E-value=0.00036 Score=71.11 Aligned_cols=157 Identities=17% Similarity=0.141 Sum_probs=100.1
Q ss_pred CCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC-------cEEEEccC--CCCeEEEEecCCCC--cEEE------E
Q psy6570 49 SSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG-------RMFWTELG--IKPRISGASIDGKN--KFNL------V 111 (713)
Q Consensus 49 ~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~-------~ly~td~~--~~~~I~~~~~dG~~--~~~l------~ 111 (713)
....+.+++++|+.+..+- ..+++++.+-+.-. ++|.++.. .+ +|..+++|... .+.+ +
T Consensus 48 k~~gL~Vydl~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n-~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 48 KKSGLVVYSLDGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKN-TIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp TTTEEEEEETTSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCC-EEEEEEECTTTCCEEECSCTTSCE
T ss_pred CCCCEEEEcCCCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCC-eEEEEEECCCCCceeeccccccCc
Confidence 3578999999998877653 25778877765211 46888887 67 88888776322 2223 1
Q ss_pred eCCCCCCeeEEE--eCCCC--eEEEEcCCCCcEEEEeC----CCC-ceeEEEecCCCCccceeeeee--CCeEEEEeCCC
Q psy6570 112 DNNIQWPTGITI--DYPSQ--RLYWADPKARTIESINL----NGK-DRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRT 180 (713)
Q Consensus 112 ~~~~~~p~glav--d~~~~--~LY~~d~~~~~I~~~~~----~g~-~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~ 180 (713)
.+.+..|.||++ ++..+ ++|+++.. ++++.+.+ +|. ..+++.+... ...|.++.++ .++||+++...
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccc
Confidence 244578999999 87666 47777765 67766554 232 2233333322 4578899998 47999999885
Q ss_pred CcEEEEccc--CCCcceeee----ccc-cccccEEEEee
Q psy6570 181 NNILKINKF--GNSDFNVLA----NNL-NRASDVLILQE 212 (713)
Q Consensus 181 ~~i~~~~~~--~~~~~~~~~----~~~-~~~~~i~v~~~ 212 (713)
.||+++.. ++...+.+. ..+ ..+++|.++..
T Consensus 202 -GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 202 -AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA 239 (355)
T ss_dssp -EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred -eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec
Confidence 49999944 322322221 122 26788888744
No 187
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.04 E-value=0.00033 Score=72.68 Aligned_cols=184 Identities=13% Similarity=0.081 Sum_probs=120.1
Q ss_pred CCCCCceEEEeccCCeEEEeecCCC------------CCCeEEEEecCCc--e-EEEE-EcCC----CCCcceEEEc-C-
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGR------------SSNNIMVSTLEGR--K-KRTL-LNTG----LNEPYDIALE-P- 81 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~------------~~~~I~~~~~~G~--~-~~~l-~~~~----~~~p~~iavD-~- 81 (713)
.+..+.++.+|. .++|++.|.+.. ...+|.++||... . .+.+ +... .....+|+|| .
T Consensus 85 ~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 467788999996 589999998742 1247999999876 3 3322 2222 1335689999 2
Q ss_pred -C----CCcEEEEccCCCCeEEEEecCCCCcEEEEeC-------------C-----CCCCeeEEEeCC----CCeEEEEc
Q psy6570 82 -L----SGRMFWTELGIKPRISGASIDGKNKFNLVDN-------------N-----IQWPTGITIDYP----SQRLYWAD 134 (713)
Q Consensus 82 -~----~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-------------~-----~~~p~glavd~~----~~~LY~~d 134 (713)
. ++++|+||.+.. .|.++++.......+... + .....||||++. ..+|||.-
T Consensus 164 ~~~~c~~~~aYItD~~~~-gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRG-ALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp TTTTSCSEEEEEEETTTT-EEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred CCCCCCccEEEEEcCCCC-cEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 2 678999998766 888888764433333320 0 124578999987 78999999
Q ss_pred CCCCcEEEEeC----CC---CceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccC-C---Ccceeeec--
Q psy6570 135 PKARTIESINL----NG---KDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFG-N---SDFNVLAN-- 199 (713)
Q Consensus 135 ~~~~~I~~~~~----~g---~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~-~---~~~~~~~~-- 199 (713)
....+++++.. +. ...+.+.... ...+..+++++ .+.||+++...+.|.+.+..+ . ....++..
T Consensus 243 lss~~ly~V~T~~L~~~~~~~~v~~~G~kg-~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~ 321 (381)
T 3q6k_A 243 GSAIKVYSVNTKELKQKGGKLNPELLGNRG-KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS 321 (381)
T ss_dssp SSCSEEEEEEHHHHSSTTCCCCCEEEEECC-TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT
T ss_pred CCCCcEEEEEHHHhhCcchhhceEEeeecC-CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC
Confidence 99899999972 22 2333343321 12344566675 578999999999999998764 2 23334333
Q ss_pred cccccccEEEE
Q psy6570 200 NLNRASDVLIL 210 (713)
Q Consensus 200 ~~~~~~~i~v~ 210 (713)
.+..|.++++.
T Consensus 322 ~l~~pd~~~i~ 332 (381)
T 3q6k_A 322 RFVFGTDISVD 332 (381)
T ss_dssp TCCSEEEEEEC
T ss_pred CccccCeEEEC
Confidence 24456666654
No 188
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.03 E-value=5.1e-05 Score=79.29 Aligned_cols=142 Identities=4% Similarity=-0.216 Sum_probs=95.3
Q ss_pred cCCeEEEeecCCCCCC----eEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccC---------CCCeEEEEec
Q psy6570 36 VGKNLYWTDAGGRSSN----NIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELG---------IKPRISGASI 102 (713)
Q Consensus 36 ~~~~ly~td~~~~~~~----~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~---------~~~~I~~~~~ 102 (713)
..+++|+++. ..+ +|.++|++.......+..+ ..| +|+++|..++||+++.. .+ .|.++++
T Consensus 30 ~~~~~yV~~~---~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~-~VsviD~ 103 (368)
T 1mda_H 30 ISRRSHITLP---AYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTD-YVEVFDP 103 (368)
T ss_dssp CTTEEEEEEC---TTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEE-EEEEECT
T ss_pred CCCeEEEECC---ccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCC-EEEEEEC
Confidence 3478999998 444 8889998875554444444 468 99999999999999842 23 7888888
Q ss_pred CCCCcEEEEeCC-------CCCCeeEEEeCCCCeEEEEcCC-CCcEEE--EeCCCCceeEEEecCCCCccceeeeeeCCe
Q psy6570 103 DGKNKFNLVDNN-------IQWPTGITIDYPSQRLYWADPK-ARTIES--INLNGKDRFVVYHTEDNGYKPYKLEVFEDN 172 (713)
Q Consensus 103 dG~~~~~l~~~~-------~~~p~glavd~~~~~LY~~d~~-~~~I~~--~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ 172 (713)
.......-+... ...|.+|+|++++++||++... .+.|.. +|... ...+... ....+...+++
T Consensus 104 ~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~-----~~~~~~p~g~~ 176 (368)
T 1mda_H 104 VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSA-----SCFHIHPGAAA 176 (368)
T ss_dssp TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECS-----SCCCCEEEETT
T ss_pred CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECC-----CceEEccCCCe
Confidence 754433322211 2579999999999999999865 566777 66544 3333211 11234445666
Q ss_pred EEEEeCCCCcEEEEcccC
Q psy6570 173 LYFSTYRTNNILKINKFG 190 (713)
Q Consensus 173 ly~td~~~~~i~~~~~~~ 190 (713)
+|++....+++..++...
T Consensus 177 ~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 177 THYLGSCPASLAASDLAA 194 (368)
T ss_dssp EEECCCCTTSCEEEECCS
T ss_pred EEEEEcCCCCEEEEECcc
Confidence 777776777766666543
No 189
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.01 E-value=2.2e-06 Score=61.65 Aligned_cols=35 Identities=31% Similarity=0.777 Sum_probs=28.3
Q ss_pred cCCCCCCCCCcEe-----ccCCCCccccCCCCCcCCCCcc
Q psy6570 417 QCLNLKCQNGGVC-----VNKTTGLECDCPKFYYGKNCQY 451 (713)
Q Consensus 417 ~C~~~~C~~~~~C-----~~~~~~~~C~C~~G~~g~~C~~ 451 (713)
+|.+.||.++|+| ++..++|+|.|++||+|..|+.
T Consensus 10 eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 10 EKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp STTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 7888899999999 4566789999999999998873
No 190
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.98 E-value=0.00033 Score=74.90 Aligned_cols=178 Identities=12% Similarity=0.056 Sum_probs=115.5
Q ss_pred CceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 7 GNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 7 ~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
..|+.+++.+... .+......+..+++.+.+..|+++.... ....|++.++++...+.+... ......+++.|....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~-g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~spdg~~ 280 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTDG-RSNNTEPTWFPDSQN 280 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEECCCC-SSCEEEEEECTTSSE
T ss_pred cEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC-CCceEEEEECCCCCEEeCcCC-CCcccceEECCCCCE
Confidence 4777888776443 3333334567899999888888765411 345799999987665544432 345778999987777
Q ss_pred EEEEcc-CCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC--CCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 86 MFWTEL-GIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK--ARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 86 ly~td~-~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
|+++.. ....+|++.++++...+.+.. .......+++++++++|+++... ...|+.+++++.....+... ..
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~----~~ 355 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST----FL 355 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS----SS
T ss_pred EEEEECCCCCcEEEEEECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC----CC
Confidence 777653 333489999998776544432 23455689999999999888654 45899999987665544322 13
Q ss_pred ceeeee--eCCeEEEEeCCCC--cEEEEcccCC
Q psy6570 163 PYKLEV--FEDNLYFSTYRTN--NILKINKFGN 191 (713)
Q Consensus 163 p~~i~~--~~~~ly~td~~~~--~i~~~~~~~~ 191 (713)
...+++ ++..|+++....+ .|+.++..++
T Consensus 356 ~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp CEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred cCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 344444 3556766654433 6888876543
No 191
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.91 E-value=4.3e-06 Score=86.93 Aligned_cols=42 Identities=45% Similarity=0.916 Sum_probs=0.0
Q ss_pred CCCCCCcEEcCCCCCeeccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEeecCC
Q psy6570 511 CTCLNGGTCIPNSKNNVCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG 571 (713)
Q Consensus 511 ~~C~~~g~C~~~~~~~~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g 571 (713)
.+|.++|+|.+.. +|.|++||+|..|+. ..|.+.|+|....|
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~----------------c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYTGILCEK----------------LRCEEAGSCGSDSG 412 (426)
T ss_dssp -------------------------------------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCcCCCCcC----------------CCCCCCCcccCCCC
Confidence 4788888998654 899999999987762 23666777776554
No 192
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.91 E-value=0.00056 Score=73.02 Aligned_cols=180 Identities=12% Similarity=0.023 Sum_probs=117.3
Q ss_pred CceeEEEccCcc-cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 7 GNVTRVKREMNL-KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 7 ~~I~~~~~~~~~-~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
++|+.+++++.. +.+.........+++.+.++.|+++.... ....|.+.++++...+.+... ...+..+++.|...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~~tg~~~~l~~~-~~~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASF-PRHNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEEEECC-SSCEEEEEECTTSSE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCcEEEeecC-CCcccCEEEcCCCCE
Confidence 678888888743 34444455678899999888888876511 236899999987665555433 246788999998777
Q ss_pred EEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC--CCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 86 MFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP--KARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 86 ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
|+++... ....|++.++++...+.+.. .......+++++++.+|+++.. ...+|+.+++++.....+... ...
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---~~~ 312 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---GSQ 312 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---SSE
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---CCc
Confidence 8876533 23379999998765544432 3345678999998888887753 344899999987665443322 122
Q ss_pred ceeeee--eCCeEEEEeCC--CCcEEEEcccCCC
Q psy6570 163 PYKLEV--FEDNLYFSTYR--TNNILKINKFGNS 192 (713)
Q Consensus 163 p~~i~~--~~~~ly~td~~--~~~i~~~~~~~~~ 192 (713)
...+++ ++.+|+++... ...|+.++..++.
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 333443 45667766543 3467777765543
No 193
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.88 E-value=9.7e-06 Score=54.22 Aligned_cols=34 Identities=24% Similarity=0.625 Sum_probs=31.0
Q ss_pred ccCCCCCCCCCCCCeeeccCCCceeeeCCCCccc
Q psy6570 219 VTNHCDDKPCHQSALCINLPSSHTCLCPDHLTEE 252 (713)
Q Consensus 219 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~~~ 252 (713)
.+|+|..+||.++++|++..++|+|.|++||+|.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 4689999999999999999999999999999853
No 194
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.87 E-value=5.5e-06 Score=86.12 Aligned_cols=104 Identities=29% Similarity=0.652 Sum_probs=30.3
Q ss_pred eeecCCCCCeecCCCCccCCCCCCccccCCCCCCcccCCCCccCCCCCCCCCCCCcEE-cCCCCCeecc-CCCCCCCCCC
Q psy6570 462 ECSITDSGPKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTC-IPNSKNNVCK-CPSQYTGRRC 539 (713)
Q Consensus 462 ~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~g~C-~~~~~~~~C~-C~~g~~G~~C 539 (713)
.|....+.+.|.|..+++|..|+. |.+||.+..+.. +..| ......+.|. |+-++.|..|
T Consensus 305 ~C~~~~g~~~C~C~~~ttG~~CE~-------------C~pgy~~~P~~~-----gt~~p~~~g~~~~C~pC~Cn~~g~~C 366 (426)
T 3zyj_B 305 VCVYDNSKLTCECEHNTTGPDCGK-------------CKKNYQGRPWSP-----GSYLPIPKGAANACIPSISSIGTNVC 366 (426)
T ss_dssp CEEEETTEEEECCCTTEESSSSCE-------------ECTTCCSSCCCC-----CBCCSSSSCBCCCCCCCCC-------
T ss_pred hcCCCCCCceeeCCCCCcCCCccc-------------cccccccCcccC-----CcccccCCCCCCcccCCCCCCCcCcc
Confidence 455555556888888888888875 778887765432 2111 1112234453 4444556666
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCCCCCCCCCCCCeEecC
Q psy6570 540 ECAVGDTSCASLANKCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSPSCHNYCDNAGLCSYS 608 (713)
Q Consensus 540 ~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~C~~~C~~~g~C~~~ 608 (713)
+.. ..+|.++|+|.+.. +|.|++||+|..|+.. .|.+.|+|...
T Consensus 367 D~~--------------t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~c--------~C~~~g~C~~~ 410 (426)
T 3zyj_B 367 DNE--------------LLHCQNGGTCHNNV---RCLCPAAYTGILCEKL--------RCEEAGSCGSD 410 (426)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccC--------------cccCCCCCCcCCCC---CCcCCCCCcCCCCcCC--------CCCCCCcccCC
Confidence 532 23688889998654 8999999999988642 36666777543
No 195
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.81 E-value=0.00044 Score=68.93 Aligned_cols=146 Identities=8% Similarity=0.053 Sum_probs=94.0
Q ss_pred CCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
..+|+.+++.+.....+.....+..+++.+.++.|+++.... ..-+|+.+++++.....+. .....+..++++|....
T Consensus 109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp SCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSE
T ss_pred cceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcc-cCCCccccceECCCCCE
Confidence 456777777665444444444577788888888888665410 1235777777765554443 33356788999987777
Q ss_pred EEEEcc-CCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC----------CCcEEEEeCCCCceeEEE
Q psy6570 86 MFWTEL-GIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK----------ARTIESINLNGKDRFVVY 154 (713)
Q Consensus 86 ly~td~-~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~----------~~~I~~~~~~g~~~~~~~ 154 (713)
|+++.. ....+|+.+++++...+.+.. .......+++++...+|+++... ..+|+.+++++.....+.
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 877653 333478888877766544432 22345678999888888877542 256999998876655444
No 196
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.74 E-value=2.4e-06 Score=61.22 Aligned_cols=43 Identities=28% Similarity=0.774 Sum_probs=34.6
Q ss_pred CcccCCCCccCCCCCCCCCCCCcEEcC----CCCCeeccCCCCCCCCCCccc
Q psy6570 495 PKCMCSPGYSGKKCDTCTCLNGGTCIP----NSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 495 ~~C~C~~G~~g~~C~~~~C~~~g~C~~----~~~~~~C~C~~g~~G~~C~~~ 542 (713)
+.|.|++||. ..||.|+|+|++ ..+.|+|.|++||+|.+||..
T Consensus 3 ~~C~C~~g~~-----~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCPETFD-----AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CCBCCCHHHH-----HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeeECCCCCc-----CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 4577888876 347899999986 345789999999999999854
No 197
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.73 E-value=0.00017 Score=77.78 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=80.6
Q ss_pred ecCCCCCceEEEeccCCeEEEeecCCC------------------CCCeEEEEecCCce--------EEEEEc-------
Q psy6570 22 LSNLHDPRGVAVDWVGKNLYWTDAGGR------------------SSNNIMVSTLEGRK--------KRTLLN------- 68 (713)
Q Consensus 22 ~~~~~~p~gla~D~~~~~ly~td~~~~------------------~~~~I~~~~~~G~~--------~~~l~~------- 68 (713)
.+.+.+|++|++++.++.||++-.++. ..+.|+++.+++.. ...++.
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~ 459 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccc
Confidence 345678999999999999999865431 13779999876532 222221
Q ss_pred -------------CCCCCcceEEEcCCCCcEEE-EccCC----------CCeEEEEecCCCCcEEEEeC-CCCCCeeEEE
Q psy6570 69 -------------TGLNEPYDIALEPLSGRMFW-TELGI----------KPRISGASIDGKNKFNLVDN-NIQWPTGITI 123 (713)
Q Consensus 69 -------------~~~~~p~~iavD~~~~~ly~-td~~~----------~~~I~~~~~dG~~~~~l~~~-~~~~p~glav 123 (713)
..+..|.+|++|+ .|.||+ ||... +..|++++.+....+.++.. ....|+||++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiaf 538 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred cccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEE
Confidence 1268899999996 688888 88531 12789998865455555543 3567999999
Q ss_pred eCCCCeEEEEcC
Q psy6570 124 DYPSQRLYWADP 135 (713)
Q Consensus 124 d~~~~~LY~~d~ 135 (713)
+++.+.||++-.
T Consensus 539 SPD~ktLfV~vQ 550 (592)
T 4a9v_A 539 SPDQKTLFVGIQ 550 (592)
T ss_dssp CTTSSEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 999999999864
No 198
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.71 E-value=4e-06 Score=61.72 Aligned_cols=38 Identities=26% Similarity=0.563 Sum_probs=32.0
Q ss_pred CCCCCCCCCCCC--cEEeecCCCceeeCCCCCc-CCCCCcC
Q psy6570 552 ANKCTPNYCSNN--GTCVLIEGKPSCKCLPPYS-GKQCTER 589 (713)
Q Consensus 552 ~~~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-G~~C~~~ 589 (713)
+++|.++||.++ |+|++..++|+|.|++||+ |..|+..
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 577888889887 7999988899999999999 9888653
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.71 E-value=0.00082 Score=70.25 Aligned_cols=127 Identities=12% Similarity=0.097 Sum_probs=78.7
Q ss_pred ccCCeEEEeecCCCCCCeEEEEecCCceEEEEEc----C-----CCCCcce---EEEcCCCCcEEEEcc-C--------C
Q psy6570 35 WVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN----T-----GLNEPYD---IALEPLSGRMFWTEL-G--------I 93 (713)
Q Consensus 35 ~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~----~-----~~~~p~~---iavD~~~~~ly~td~-~--------~ 93 (713)
+....+||... .++|.++++.+....++.. . ....|.+ +++++..++||++.. . .
T Consensus 209 ~~g~~~~~~~~----~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 209 LDKDKAHFVSY----YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp ECSSEEEEEBT----TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred ccCCEEEEEeC----CCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence 33445555543 3578888876543332211 0 0112444 999998899999854 1 1
Q ss_pred CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee
Q psy6570 94 KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF 169 (713)
Q Consensus 94 ~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~ 169 (713)
...|+++++.......-+.... |.+|+|++++++||++.. +.|..+++.....+++..-......|.+|++.
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred CceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 1278888886544333333333 999999999999999985 88999998765334443321225577777665
No 200
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.71 E-value=2.6e-05 Score=56.04 Aligned_cols=38 Identities=34% Similarity=0.851 Sum_probs=30.2
Q ss_pred CCCCCCC---CCCCCcEEe--ecCCCceeeCCCCCcCCCCCcC
Q psy6570 552 ANKCTPN---YCSNNGTCV--LIEGKPSCKCLPPYSGKQCTER 589 (713)
Q Consensus 552 ~~~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~C~~~ 589 (713)
+++|.++ +|.++|+|+ +..++|+|.|++||+|..|+..
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 4567765 888888998 6778888999999999888753
No 201
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.70 E-value=2.8e-06 Score=60.89 Aligned_cols=46 Identities=37% Similarity=0.824 Sum_probs=31.3
Q ss_pred CeeecCCCcccCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCc
Q psy6570 329 PHCICQENFYGTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384 (713)
Q Consensus 329 ~~C~C~~g~~G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~ 384 (713)
+.|.|++||. ..||+|+|+|+.......+.|.|.|++||+|.+|+.
T Consensus 3 ~~C~C~~g~~----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHH----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCc----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 4688888886 347888888875210011257888888888888874
No 202
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.68 E-value=2.7e-05 Score=53.85 Aligned_cols=30 Identities=33% Similarity=0.800 Sum_probs=20.8
Q ss_pred CCCCCcEEe--ecCCCceeeCCCCCcCCCCCc
Q psy6570 559 YCSNNGTCV--LIEGKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 559 ~C~~~~~C~--~~~g~~~C~C~~G~~G~~C~~ 588 (713)
+|.++|+|+ +..++|+|.|++||+|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 677777776 455667777777777777754
No 203
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.61 E-value=0.0011 Score=75.45 Aligned_cols=181 Identities=7% Similarity=-0.077 Sum_probs=105.2
Q ss_pred CceeEEEccC------cccEE-e-cCCCCCceEEEeccCCeEEEeecCCC----CCCeEEEEecCC-c---eEEEEEcCC
Q psy6570 7 GNVTRVKREM------NLKTV-L-SNLHDPRGVAVDWVGKNLYWTDAGGR----SSNNIMVSTLEG-R---KKRTLLNTG 70 (713)
Q Consensus 7 ~~I~~~~~~~------~~~~~-~-~~~~~p~gla~D~~~~~ly~td~~~~----~~~~I~~~~~~G-~---~~~~l~~~~ 70 (713)
.+|+++++++ ..... . .......++++.+.++.|+++..... ....|++.++++ . ..+.+....
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 5788888887 44332 3 33344567889999889988775210 124799999984 3 344444322
Q ss_pred CCCcceEEEcCCCCcEEEE-ccCCCCeEEEEecCCCCcEEEEeCC--CCC------CeeEEEeCCCCeEEEEcCCCCcEE
Q psy6570 71 LNEPYDIALEPLSGRMFWT-ELGIKPRISGASIDGKNKFNLVDNN--IQW------PTGITIDYPSQRLYWADPKARTIE 141 (713)
Q Consensus 71 ~~~p~~iavD~~~~~ly~t-d~~~~~~I~~~~~dG~~~~~l~~~~--~~~------p~glavd~~~~~LY~~d~~~~~I~ 141 (713)
...+..+++.|.++ ||++ +.....+|++.++++...+.++... ... ...+++.+.+..||.+.....+|+
T Consensus 241 ~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (662)
T 3azo_A 241 EEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLG 319 (662)
T ss_dssp TBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEE
T ss_pred CceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEE
Confidence 35677889987665 5554 4433337999988665555444321 111 346777755555555444556788
Q ss_pred EEeCCCCceeEEEecCCCCccceee-eeeCCeEEEEeCCC---CcEEEEcccCC
Q psy6570 142 SINLNGKDRFVVYHTEDNGYKPYKL-EVFEDNLYFSTYRT---NNILKINKFGN 191 (713)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~~~~p~~i-~~~~~~ly~td~~~---~~i~~~~~~~~ 191 (713)
++++++...+.+... .....++ +.+++.++++.... ..|++++..++
T Consensus 320 ~~d~~~~~~~~l~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 320 ILDPESGELVDAAGP---WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp EEETTTTEEEECCSS---CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEECCCCcEEEecCC---CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 889887665444322 1122344 56666666554332 25666665444
No 204
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.60 E-value=0.00076 Score=70.80 Aligned_cols=151 Identities=10% Similarity=-0.002 Sum_probs=95.5
Q ss_pred CCceeEEEccCcc-cEEecCCCCCceEEEec-cCCeEEEeecCCC--CCCeEEEEecCCceEEEEEcCCC-CCcceEEEc
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLHDPRGVAVDW-VGKNLYWTDAGGR--SSNNIMVSTLEGRKKRTLLNTGL-NEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~-~~~~ly~td~~~~--~~~~I~~~~~~G~~~~~l~~~~~-~~p~~iavD 80 (713)
...|+++++.+.. +.+.........+++.+ .++.|+++..... ...+|++++++|...+.+..... .....+++.
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 4678888987654 34444445567889998 7777766554211 14589999998877666553321 124467888
Q ss_pred CCCCcEEE-EccCCCC--eEEEEecCCCCcEEEEeCCC-----CCCeeEEEeCCCCeEEEEc--------CCCCcEEEEe
Q psy6570 81 PLSGRMFW-TELGIKP--RISGASIDGKNKFNLVDNNI-----QWPTGITIDYPSQRLYWAD--------PKARTIESIN 144 (713)
Q Consensus 81 ~~~~~ly~-td~~~~~--~I~~~~~dG~~~~~l~~~~~-----~~p~glavd~~~~~LY~~d--------~~~~~I~~~~ 144 (713)
|..+.|++ ++..... .|++.++++...+.+..... ..+.++++.+++++|+++- .....|+.++
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 247 PDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 87777755 4433332 39999998877665543221 1256678888888888763 4566899999
Q ss_pred CCCCceeEEEec
Q psy6570 145 LNGKDRFVVYHT 156 (713)
Q Consensus 145 ~~g~~~~~~~~~ 156 (713)
+++...+.+...
T Consensus 327 ~~~~~~~~l~~~ 338 (388)
T 3pe7_A 327 MKNGTQHRVARH 338 (388)
T ss_dssp TTTTEEEEEEEC
T ss_pred ccCCceEEeccc
Confidence 988766655543
No 205
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.59 E-value=5e-05 Score=52.46 Aligned_cols=36 Identities=31% Similarity=0.763 Sum_probs=30.4
Q ss_pred CCCCC---CCCCCcEEc--CCCCCeeccCCCCCCCCCCccc
Q psy6570 507 KCDTC---TCLNGGTCI--PNSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 507 ~C~~~---~C~~~g~C~--~~~~~~~C~C~~g~~G~~C~~~ 542 (713)
.|... ||.++|+|. +..++|+|.|++||+|.+|+..
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 34445 899999997 6677999999999999999865
No 206
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.56 E-value=0.00057 Score=77.74 Aligned_cols=185 Identities=6% Similarity=-0.029 Sum_probs=109.4
Q ss_pred CCceeEEEcc----CcccEEec-----CCCCCceEEEeccCCeEEEeecCC------CCCCeEEEEecCC------ceEE
Q psy6570 6 SGNVTRVKRE----MNLKTVLS-----NLHDPRGVAVDWVGKNLYWTDAGG------RSSNNIMVSTLEG------RKKR 64 (713)
Q Consensus 6 ~~~I~~~~~~----~~~~~~~~-----~~~~p~gla~D~~~~~ly~td~~~------~~~~~I~~~~~~G------~~~~ 64 (713)
..+|+.++++ +..+.+.. ....+.++++.+.++.|+++.... .....|++.++++ ...+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 5678888877 33333322 123467889999988888776410 0225799999988 5555
Q ss_pred EEEcCCCCCcceEEEcCCCCcEEEEccCC------CCeEEEEecCCC----CcEEEEeCCCCCCeeEEEeCCCCeEEEEc
Q psy6570 65 TLLNTGLNEPYDIALEPLSGRMFWTELGI------KPRISGASIDGK----NKFNLVDNNIQWPTGITIDYPSQRLYWAD 134 (713)
Q Consensus 65 ~l~~~~~~~p~~iavD~~~~~ly~td~~~------~~~I~~~~~dG~----~~~~l~~~~~~~p~glavd~~~~~LY~~d 134 (713)
.+..........+++.|..++|+|+.+.. ...|++.+++++ ..+.+.......+..++++++++ ||++.
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 44412234566789999888898876442 137999999853 33344432245677899998777 55554
Q ss_pred CCCC--cEEEEeCCCCceeEEEecCCCCcc------ceeeeee-CCeEEEEeC-CCCcEEEEcccCC
Q psy6570 135 PKAR--TIESINLNGKDRFVVYHTEDNGYK------PYKLEVF-EDNLYFSTY-RTNNILKINKFGN 191 (713)
Q Consensus 135 ~~~~--~I~~~~~~g~~~~~~~~~~~~~~~------p~~i~~~-~~~ly~td~-~~~~i~~~~~~~~ 191 (713)
...+ +|+++++++...+.+......... ...+++. +++++++.. ....|++++..++
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred CCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 3333 899999866554444332111111 2344543 455555433 3445666665443
No 207
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.56 E-value=2.1e-05 Score=57.88 Aligned_cols=40 Identities=25% Similarity=0.756 Sum_probs=33.8
Q ss_pred CCCC-CCCCCCC--CeEecCCCCcceeecCCCcc-cCCCCcCCCC
Q psy6570 592 SPSC-HNYCDNA--GLCSYSKQGKPVCTCVNGWS-GITCSERVSC 632 (713)
Q Consensus 592 ~~~C-~~~C~~~--g~C~~~~~g~~~C~C~~G~~-G~~C~~~~~C 632 (713)
.++| .++|.++ |+|.+.. ++|.|.|++||+ |..|+...+|
T Consensus 11 ~d~C~snPC~nga~gtC~~~~-g~y~C~C~~Gy~~G~~C~~~~~C 54 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETN-SGYICRCNQGYRISLDGTGNVTC 54 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECS-SEEEEECCTTEEEEECSSSCEEE
T ss_pred CCcCcCCCCcCCCccccccCC-CceEeECCCCCccCCCCCCCCEe
Confidence 3778 7889998 8999887 899999999999 9999875444
No 208
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.54 E-value=3.6e-05 Score=53.21 Aligned_cols=36 Identities=31% Similarity=0.956 Sum_probs=26.9
Q ss_pred CCCCCC---CCCCCCcEEeecC--CCceeeCCCCCcCCCCCc
Q psy6570 552 ANKCTP---NYCSNNGTCVLIE--GKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 552 ~~~C~~---~~C~~~~~C~~~~--g~~~C~C~~G~~G~~C~~ 588 (713)
+++|.+ ++|.+ |+|.... ++|.|.|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 346665 78877 7888654 578888888888888864
No 209
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.53 E-value=0.019 Score=58.58 Aligned_cols=184 Identities=12% Similarity=0.010 Sum_probs=107.4
Q ss_pred CCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++..... .+.........+++.+.+..|+.. . ..+.|.+.++........+.........|++.|..
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g-~---~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG-T---HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE-C---TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE-c---CCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence 45566666654332 223334456789999876666544 3 46788888887655444443444567889999865
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
.+|..... .. .|...++........+.........|++++.+..|+.+ ...+.|...++........+.. .....
T Consensus 177 ~~lasg~~-dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~--h~~~v 251 (321)
T 3ow8_A 177 KYLASGAI-DG-IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA-SDDGYIKIYDVQHANLAGTLSG--HASWV 251 (321)
T ss_dssp SEEEEEET-TS-CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEE-CTTSCEEEEETTTCCEEEEECC--CSSCE
T ss_pred CEEEEEcC-CC-eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEE-cCCCeEEEEECCCcceeEEEcC--CCCce
Confidence 55555443 23 67777776543333333334456889999866655544 4567788888765443333222 12233
Q ss_pred eeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 164 YKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 164 ~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
..+++. ++.++++....+.|...+...+.....+.
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 556654 34455555566778777765554444443
No 210
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.51 E-value=0.00011 Score=52.76 Aligned_cols=36 Identities=36% Similarity=0.979 Sum_probs=31.1
Q ss_pred CCCCC---CCCCCcEEc--CCCCCeeccCCCCCCCCCCccc
Q psy6570 507 KCDTC---TCLNGGTCI--PNSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 507 ~C~~~---~C~~~g~C~--~~~~~~~C~C~~g~~G~~C~~~ 542 (713)
.|.+. ||.++|+|+ +..++|+|.|++||+|.+|+..
T Consensus 5 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 5 GCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred cCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 45554 899999999 7888999999999999999865
No 211
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.48 E-value=0.017 Score=58.61 Aligned_cols=177 Identities=10% Similarity=0.000 Sum_probs=108.4
Q ss_pred CCceeEEEccCcccE----EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 6 SGNVTRVKREMNLKT----VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~----~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
++.|...++...... +......+..+++.+.++.|+.... .+.|.+.++........+......+..|+++|
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC----CCcEEEEeCCCCceeeeeecccCceEEEEECC
Confidence 466777776654311 1223344578888887666665543 67899999876554444444446788999998
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
....|+... ... .|...++........+. .......+++++.+..|+++. ..+.|+.+++.......+... ..
T Consensus 194 ~~~~l~~~~-~dg-~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~---~~ 266 (337)
T 1gxr_A 194 DGTKLWTGG-LDN-TVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLH---ES 266 (337)
T ss_dssp TSSEEEEEE-TTS-EEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCC---SS
T ss_pred CCCEEEEEe-cCC-cEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCC---cc
Confidence 655555544 333 78888887654433333 334568899998777776665 456788888877655443322 22
Q ss_pred cceeeeee-CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 162 KPYKLEVF-EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 162 ~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
....+++. ++.++++....+.|..++...+..
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 34556655 344455555567777777654433
No 212
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.46 E-value=0.0092 Score=63.71 Aligned_cols=179 Identities=8% Similarity=0.023 Sum_probs=112.5
Q ss_pred cCCceeEEEccC----------cc--cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE-------EE
Q psy6570 5 SSGNVTRVKREM----------NL--KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK-------RT 65 (713)
Q Consensus 5 ~~~~I~~~~~~~----------~~--~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~-------~~ 65 (713)
.++.|..+++.. .. ..+......+.+|++.+.+..++++-. ..+.|.+.+++.... ..
T Consensus 149 ~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~~~~ 225 (430)
T 2xyi_A 149 PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS---DDHTICLWDINATPKEHRVIDAKN 225 (430)
T ss_dssp SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC---TTSCEEEEETTSCCBGGGEEECSE
T ss_pred CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe---CCCeEEEEeCCCCCCCCceeccce
Confidence 356777777654 11 122333445788999887663555555 578899998875211 11
Q ss_pred EEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC---CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEE
Q psy6570 66 LLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK---NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIES 142 (713)
Q Consensus 66 l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~---~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~ 142 (713)
.+......+..|++.|.++.++++..... .|...++... .....+...-..++.|++++....++++-...+.|..
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQ-KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCC-eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 22222356889999987888888876555 8888888754 2222333445567899999888878888777788999
Q ss_pred EeCCCC-c-eeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccC
Q psy6570 143 INLNGK-D-RFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 143 ~~~~g~-~-~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~ 190 (713)
.++... . ...+... ......|.+. +..++++....+.|..++...
T Consensus 305 wd~~~~~~~~~~~~~h---~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 305 WDLRNLKLKLHSFESH---KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EETTCTTSCSEEEECC---SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EeCCCCCCCeEEeecC---CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 998652 2 2333222 2233455554 446777776777777776543
No 213
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.44 E-value=0.017 Score=60.93 Aligned_cols=184 Identities=10% Similarity=0.030 Sum_probs=111.9
Q ss_pred cCCceeEEEccCccc---EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC
Q psy6570 5 SSGNVTRVKREMNLK---TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP 81 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~---~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~ 81 (713)
.++.|...++..... .+......+.+|++.+.+..|+... ..+.|.+.++........+......+..|++.|
T Consensus 194 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p 269 (401)
T 4aez_A 194 RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG----NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCP 269 (401)
T ss_dssp TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTCSSEEEEECCCSSCCCEEEECT
T ss_pred CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe----CCCeEEEccCCCCCccEEecCCcceEEEEEECC
Confidence 356666677663222 2233445568888988655555443 467899999876554444434446788999999
Q ss_pred CCCcEEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEc-CCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 82 LSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWAD-PKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 82 ~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d-~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
....|+.+..+ ....|...++........+. .-.....|++++....|+.+. ...+.|...++.......+......
T Consensus 270 ~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 270 WQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp TSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred CCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 88888887642 23478888887655544443 334578999998887777764 3567788888765433333221111
Q ss_pred Cccceeeeee-CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 160 GYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 160 ~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
......+++. ++.++++....+.|..++...+..
T Consensus 349 ~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 349 DTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 2234555554 344455555667777777655543
No 214
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.41 E-value=5e-05 Score=56.87 Aligned_cols=36 Identities=33% Similarity=0.886 Sum_probs=29.7
Q ss_pred CCCCCCCCCCCcEEee-----cCCCceeeCCCCCcCCCCCc
Q psy6570 553 NKCTPNYCSNNGTCVL-----IEGKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 553 ~~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~C~~ 588 (713)
++|.+++|.++|+|++ ..++|+|.|++||+|..|+.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 4677788988899986 45788999999999999874
No 215
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.39 E-value=4e-05 Score=57.42 Aligned_cols=37 Identities=27% Similarity=0.680 Sum_probs=30.6
Q ss_pred CCCcCCCCCCCCCcEecc-----CCCCccccCCCCCcCCCCc
Q psy6570 414 TCQQCLNLKCQNGGVCVN-----KTTGLECDCPKFYYGKNCQ 450 (713)
Q Consensus 414 ~C~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~~g~~C~ 450 (713)
.|.+|.+.||.++|+|++ ..++|.|.|++||+|..|+
T Consensus 5 ~c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred ccCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence 355677788999999986 5678999999999999997
No 216
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.38 E-value=0.0061 Score=63.76 Aligned_cols=180 Identities=11% Similarity=0.032 Sum_probs=105.6
Q ss_pred ceeEEEccCcccEE-ecCCCCC-ceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCc--ceEEEcCCC
Q psy6570 8 NVTRVKREMNLKTV-LSNLHDP-RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEP--YDIALEPLS 83 (713)
Q Consensus 8 ~I~~~~~~~~~~~~-~~~~~~p-~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p--~~iavD~~~ 83 (713)
.|+.+++.+..... ......+ .++++.+.++.|+++.. ...|++.++++...+.+........ ...++++..
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~----~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg 136 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD----GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC 136 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET----TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC----CCeEEEEECCCCcceeeeechhhcccccceeECCCC
Confidence 47777877654332 2222222 36789998889998875 4689999998876665554322211 123346544
Q ss_pred CcEEEEc--------------------cCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeC-CCCeEEEEcCC-----C
Q psy6570 84 GRMFWTE--------------------LGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY-PSQRLYWADPK-----A 137 (713)
Q Consensus 84 ~~ly~td--------------------~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~-~~~~LY~~d~~-----~ 137 (713)
.+|+... ......|++.++++...+.+.. .......++++| ++++|+++... .
T Consensus 137 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (388)
T 3pe7_A 137 TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVD 215 (388)
T ss_dssp SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSS
T ss_pred CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CCccccccEECCCCCCEEEEEEecCCCCCc
Confidence 4443221 1122479999998776666654 234467899998 77777665432 4
Q ss_pred CcEEEEeCCCCceeEEEecCCCCcccee--eeeeCCeEEE-EeCCCC---cEEEEcccCCCc
Q psy6570 138 RTIESINLNGKDRFVVYHTEDNGYKPYK--LEVFEDNLYF-STYRTN---NILKINKFGNSD 193 (713)
Q Consensus 138 ~~I~~~~~~g~~~~~~~~~~~~~~~p~~--i~~~~~~ly~-td~~~~---~i~~~~~~~~~~ 193 (713)
.+|+.+++++...+.+..... ...... +..++.+|++ ++.... .|+.++..++..
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 216 ARMWLINEDGTNMRKVKTHAE-GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CSEEEEETTSCCCEESCCCCT-TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred ceEEEEeCCCCceEEeeeCCC-CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 589999998877665543311 011122 2334556744 433222 288888766543
No 217
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.37 E-value=0.0064 Score=63.61 Aligned_cols=182 Identities=8% Similarity=-0.025 Sum_probs=105.6
Q ss_pred cCCceeEEEccCcc-cEEecCCCCCceEEEec-cCCeEEEeecCCCCC----CeEEEEecCCceEEEEEcCC-CCCcceE
Q psy6570 5 SSGNVTRVKREMNL-KTVLSNLHDPRGVAVDW-VGKNLYWTDAGGRSS----NNIMVSTLEGRKKRTLLNTG-LNEPYDI 77 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~~~~~~~p~gla~D~-~~~~ly~td~~~~~~----~~I~~~~~~G~~~~~l~~~~-~~~p~~i 77 (713)
....|+.+++.+.. +.+.........+++.+ .+++|+++... .. .+|+++++++...+.+.... ...+..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~--~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEG--PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECS--CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecC--CCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 34578888887644 33344445566788887 55656665432 22 57999999887655554321 2246678
Q ss_pred EEcCCCCcEEEEcc-CCCCe--EEEEecCCCCcEEEEeCCCCCCeeEEEeC-CCCeEEEEc---------------CCCC
Q psy6570 78 ALEPLSGRMFWTEL-GIKPR--ISGASIDGKNKFNLVDNNIQWPTGITIDY-PSQRLYWAD---------------PKAR 138 (713)
Q Consensus 78 avD~~~~~ly~td~-~~~~~--I~~~~~dG~~~~~l~~~~~~~p~glavd~-~~~~LY~~d---------------~~~~ 138 (713)
++.|..++|+++.. ..... |++.++++...+.+.... ... +++.+ ++..|+++. ....
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 99987777777632 22224 999998876655554322 112 78887 565555432 1346
Q ss_pred cEEEEeCCCCceeEEEecCCCC----------ccceeeeeeCCeEEEEeCC--CCcEEEEcccCC
Q psy6570 139 TIESINLNGKDRFVVYHTEDNG----------YKPYKLEVFEDNLYFSTYR--TNNILKINKFGN 191 (713)
Q Consensus 139 ~I~~~~~~g~~~~~~~~~~~~~----------~~p~~i~~~~~~ly~td~~--~~~i~~~~~~~~ 191 (713)
.|+.+++++...+.+....... .....+..++.+|+++... ...|++++..++
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 321 FLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp EEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred cEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 7999998876655554432110 1112333446677776533 334666665433
No 218
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.35 E-value=0.023 Score=59.78 Aligned_cols=182 Identities=9% Similarity=-0.044 Sum_probs=107.1
Q ss_pred CCceeEEEccCc-------c--cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEE--cCCCCCc
Q psy6570 6 SGNVTRVKREMN-------L--KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL--NTGLNEP 74 (713)
Q Consensus 6 ~~~I~~~~~~~~-------~--~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~--~~~~~~p 74 (713)
++.|...++... . ..+......+..|++.+.+.+++++-. ..+.|.+.++........+ ......+
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG---CDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE---TTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc---CCCEEEEEECCCCCccEEEecCCCCCce
Confidence 455666665543 1 122223445678899887655666655 5678999998765544444 3334567
Q ss_pred ceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE-eCCC-CCCeeEEEeCCCCeEEEEc--CCCCcEEEEeCCCCce
Q psy6570 75 YDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLV-DNNI-QWPTGITIDYPSQRLYWAD--PKARTIESINLNGKDR 150 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~-~~~~-~~p~glavd~~~~~LY~~d--~~~~~I~~~~~~g~~~ 150 (713)
..|++.|....|+.+. ... .|...++........+ .... ..+..+++.+.+..|+..- ...+.|...++.....
T Consensus 180 ~~~~~~~~~~~l~~~~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 180 YSVDWSRDGALICTSC-RDK-RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp EEEEECTTSSCEEEEE-TTS-EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred EEEEECCCCCEEEEEe-cCC-cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 8999998555555554 333 7888887654433333 2222 2368899997654444432 4667888888865432
Q ss_pred -eEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 151 -FVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 151 -~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
..+.... .......+++. +..||++....+.|..++...+..
T Consensus 258 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 258 PLSLQELD-TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CSEEEECC-CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred CceEEecc-CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 2222211 12234445544 567777776677888887765553
No 219
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.33 E-value=0.0089 Score=63.83 Aligned_cols=179 Identities=11% Similarity=0.048 Sum_probs=112.0
Q ss_pred cCCceeEEEccCcc---c------EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc----eEEEEEcCCC
Q psy6570 5 SSGNVTRVKREMNL---K------TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR----KKRTLLNTGL 71 (713)
Q Consensus 5 ~~~~I~~~~~~~~~---~------~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~----~~~~l~~~~~ 71 (713)
.++.|...++.... . .+......+..|++.+.++.++++.. ..+.|.+.++... ....+ ....
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~---~dg~i~i~d~~~~~~~~~~~~~-~~~~ 277 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA---DDQKLMIWDTRNNNTSKPSHTV-DAHT 277 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE---TTSEEEEEETTCSCSSSCSEEE-ECCS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe---CCCeEEEEECCCCCCCcceeEe-ecCC
Confidence 45677777766511 1 11223344778999887788888877 6789999998754 23333 2333
Q ss_pred CCcceEEEcCCCCcEEEEccCCCCeEEEEecCC-CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-
Q psy6570 72 NEPYDIALEPLSGRMFWTELGIKPRISGASIDG-KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD- 149 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~- 149 (713)
..+..|++.|....++++..... .|...++.. ......+.........|++++.+..|+++-...++|...++....
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg-~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADK-TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCC-eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 66889999998777887765544 788888875 333333333455678999998887888877667777777765411
Q ss_pred -----------eeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 150 -----------RFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 150 -----------~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
...+.........+..+++. +.+++++....+.|..++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred ccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 12333222223345666665 3336666666666555543
No 220
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.33 E-value=0.02 Score=58.07 Aligned_cols=165 Identities=15% Similarity=0.198 Sum_probs=100.9
Q ss_pred CCceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
.+.|+++++++..... .........+++|. .+.||+... .+.|++++.+|+....+. ........+++|. ++
T Consensus 116 ~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt~----~~~l~~~d~~g~~~~~~~-~~~~~~~~~~~d~-~g 188 (330)
T 3hxj_A 116 DGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGSN----DNYLYAINPDGTEKWRFK-TNDAITSAASIGK-DG 188 (330)
T ss_dssp TSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEECT----TSEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TC
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEcC----CCEEEEECCCCCEeEEEe-cCCCceeeeEEcC-CC
Confidence 4667788877432211 22223345667774 467877653 578999998865544333 2234566788884 67
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccce
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPY 164 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~ 164 (713)
.||++. . .|++++.+|....... ........+++|. +++||++.. .+.|++++.+|.....+... ...+.
T Consensus 189 ~l~v~t---~-~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~---~~~~~ 258 (330)
T 3hxj_A 189 TIYFGS---D-KVYAINPDGTEKWNFY-AGYWTVTRPAISE-DGTIYVTSL-DGHLYAINPDGTEKWRFKTG---KRIES 258 (330)
T ss_dssp CEEEES---S-SEEEECTTSCEEEEEC-CSSCCCSCCEECT-TSCEEEEET-TTEEEEECTTSCEEEEEECS---SCCCS
T ss_pred EEEEEe---C-EEEEECCCCcEEEEEc-cCCcceeceEECC-CCeEEEEcC-CCeEEEECCCCCEeEEeeCC---CCccc
Confidence 888877 3 7888886665433332 2334567888884 568888764 46788888777654433322 12233
Q ss_pred eeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 165 KLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 165 ~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
.+.++ ++.||++.. .+.|+++++
T Consensus 259 ~~~~~~~g~l~v~t~-~ggl~~~d~ 282 (330)
T 3hxj_A 259 SPVIGNTDTIYFGSY-DGHLYAINP 282 (330)
T ss_dssp CCEECTTSCEEEECT-TCEEEEECT
T ss_pred cceEcCCCeEEEecC-CCCEEEECC
Confidence 45555 677877754 457888886
No 221
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.33 E-value=0.0021 Score=71.85 Aligned_cols=170 Identities=8% Similarity=-0.026 Sum_probs=103.2
Q ss_pred ceeEEEc--cCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 8 NVTRVKR--EMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 8 ~I~~~~~--~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
+|+.+++ ++... .+........+++.+..+.++++.. ..+.+.+.++++...+.+..... ..++++|..++
T Consensus 91 ~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~---~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~ 163 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGA---TEDRVALYALDGGGLRELARLPG---FGFVSDIRGDL 163 (582)
T ss_dssp EEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEE---CSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTE
T ss_pred EEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEec---CCCCceEEEccCCcEEEeecCCC---ceEEECCCCCE
Confidence 5666776 55433 2333334445667666666655544 34445577887766665554322 78999998888
Q ss_pred EEEEccC--CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCC-CcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 86 MFWTELG--IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKA-RTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 86 ly~td~~--~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~-~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
|+++... ....|++.++++...+.|.. .......++++|++++|+.++... .+|+++++++...+ +..... ..
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~--~~ 239 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS--KD 239 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC--SH
T ss_pred EEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC--cC
Confidence 8866432 22379999988777666643 334458899999999999665432 48999999887766 433211 12
Q ss_pred ceeee--------ee-CCeEEEEeCCCCcEEEEcc
Q psy6570 163 PYKLE--------VF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 163 p~~i~--------~~-~~~ly~td~~~~~i~~~~~ 188 (713)
..+++ +. +++||++....+.+..+..
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 22222 32 2367766555555544443
No 222
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.28 E-value=0.023 Score=58.68 Aligned_cols=178 Identities=11% Similarity=-0.019 Sum_probs=104.9
Q ss_pred cCCceeEEEccCcccE--E---e-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEE
Q psy6570 5 SSGNVTRVKREMNLKT--V---L-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIA 78 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~--~---~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 78 (713)
.++.|...++...... . . ..-.....|++.+.+..|+ +-. ..+.|.+.++........+.........++
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~-sgs---~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV-SGS---KDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE-EEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE-EEe---CCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 3566666666653321 1 1 1233467899988766555 444 467899999876554444433346678899
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE--eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEEe
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLV--DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVYH 155 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~--~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~ 155 (713)
+.+....++++-.... .|..-++........+ ......+..+++.+.+++++++-...+.|...++.... ...+..
T Consensus 177 ~~~~~~~~l~s~s~D~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDN-RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp ECSSCTTEEEEEETTS-CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC
T ss_pred ecCCCCCceeeecccc-ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC
Confidence 9987777877765444 6777777644333222 12234567899998888888876677888888876433 333322
Q ss_pred cCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccC
Q psy6570 156 TEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 156 ~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~ 190 (713)
. ...-..|++. +.+++.+-...+.|+..+...
T Consensus 256 h---~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 256 H---SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp C---SSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred C---CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 2 1223445543 335555555566677776543
No 223
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.27 E-value=0.049 Score=55.02 Aligned_cols=176 Identities=13% Similarity=0.075 Sum_probs=103.5
Q ss_pred CCceeEEEccCcc--cEE--e---cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE--EEEEcCCCCCcce
Q psy6570 6 SGNVTRVKREMNL--KTV--L---SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK--RTLLNTGLNEPYD 76 (713)
Q Consensus 6 ~~~I~~~~~~~~~--~~~--~---~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~--~~l~~~~~~~p~~ 76 (713)
++.|...++.... ..+ . .....+..+++.+.++.|+... ..+.|.+.+++.... ...+......+..
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~ 146 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----EASTLSIWDLAAPTPRIKAELTSSAPACYA 146 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE----SSSEEEEEECCCC--EEEEEEECSSSCEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc----CCCcEEEEECCCCCcceeeecccCCCceEE
Confidence 5666666665432 111 1 2334467889988766666554 367899999876552 2223333456788
Q ss_pred EEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec
Q psy6570 77 IALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 77 iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~ 156 (713)
|++.|....|+..... . .|...++........+.........|++++.+.+|+.+. ..+.|...++...........
T Consensus 147 ~~~~~~~~~l~~~~~d-g-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~ 223 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSD-G-NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQQHDF 223 (337)
T ss_dssp EEECTTSSEEEEEETT-S-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCC-C-cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe-cCCcEEEEECCCCceEeeecC
Confidence 9999866566655432 3 688888876544444444455678999998766666554 567888888876544333322
Q ss_pred CCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCC
Q psy6570 157 EDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 157 ~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~ 191 (713)
......+++. ++.++++....+.|..++....
T Consensus 224 ---~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 224 ---TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred ---CCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 2234455553 2333344445566777765543
No 224
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.25 E-value=0.0047 Score=70.69 Aligned_cols=181 Identities=11% Similarity=-0.004 Sum_probs=103.7
Q ss_pred CCceeEEEccCcccEEec-C---CCCCceEEEeccCCeEEEeecCC-CCCCeEEEEecCCc-eEEEEEcCC----CCCcc
Q psy6570 6 SGNVTRVKREMNLKTVLS-N---LHDPRGVAVDWVGKNLYWTDAGG-RSSNNIMVSTLEGR-KKRTLLNTG----LNEPY 75 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~-~---~~~p~gla~D~~~~~ly~td~~~-~~~~~I~~~~~~G~-~~~~l~~~~----~~~p~ 75 (713)
..+|+.+++.+.....+. . ...+..+++.+.++.|+++.... .....|.+.++++. ..+.+.... .....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 356788888765432222 1 12356788888888888865411 01247888998765 544444221 12236
Q ss_pred eEEEcC--CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCee-EEEeCCCCeEEEEcCCC----CcEEEEeCCCC
Q psy6570 76 DIALEP--LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTG-ITIDYPSQRLYWADPKA----RTIESINLNGK 148 (713)
Q Consensus 76 ~iavD~--~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~g-lavd~~~~~LY~~d~~~----~~I~~~~~~g~ 148 (713)
.+++.| ..++||.++.....+|+.++++|...+.+.. ....... +++++++++||++.... .+|+++++++.
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 788987 5555655554433488888877765554432 2112233 79999888999886554 38999998776
Q ss_pred ceeEEEecCCCCccceeeee--eCCeEEEEeCC---CCcEEEEcccCC
Q psy6570 149 DRFVVYHTEDNGYKPYKLEV--FEDNLYFSTYR---TNNILKINKFGN 191 (713)
Q Consensus 149 ~~~~~~~~~~~~~~p~~i~~--~~~~ly~td~~---~~~i~~~~~~~~ 191 (713)
..+.+... .....+++ ++.+|+++... ...|+.++..++
T Consensus 393 ~~~~l~~~----~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 393 KTKDLTPE----SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp CCEESCCS----SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CceeccCC----CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 54444321 12233333 34455444222 244666665444
No 225
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.24 E-value=0.0042 Score=71.10 Aligned_cols=165 Identities=12% Similarity=0.027 Sum_probs=99.1
Q ss_pred CceEEEeccCCeEEEeecCC-----------------------------CCCCeEEEEecCCceEEEEEcC--CCCCcce
Q psy6570 28 PRGVAVDWVGKNLYWTDAGG-----------------------------RSSNNIMVSTLEGRKKRTLLNT--GLNEPYD 76 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~-----------------------------~~~~~I~~~~~~G~~~~~l~~~--~~~~p~~ 76 (713)
+.++++.+.++.|+++.... .....|.+.++++...+.+... ....+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 58899999888888775200 0235688899887665444321 1234668
Q ss_pred EEEcCCCCcEEEEccCC---CCeEEEEecCCC-CcEEEEeC-CC---CCCeeEEEeC--CCCeEEEEcC-CCCcEEEEeC
Q psy6570 77 IALEPLSGRMFWTELGI---KPRISGASIDGK-NKFNLVDN-NI---QWPTGITIDY--PSQRLYWADP-KARTIESINL 145 (713)
Q Consensus 77 iavD~~~~~ly~td~~~---~~~I~~~~~dG~-~~~~l~~~-~~---~~p~glavd~--~~~~LY~~d~-~~~~I~~~~~ 145 (713)
+++.|..++|+++.... ...|++.++++. ..+.+... .. .....+++.+ +++.||.++. +..+|+.++.
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC
Confidence 99998777788854332 136888888765 44444421 11 1236789987 6666666653 4467888888
Q ss_pred CCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCC----cEEEEcccCCC
Q psy6570 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTN----NILKINKFGNS 192 (713)
Q Consensus 146 ~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~----~i~~~~~~~~~ 192 (713)
++...+.+...........+++.+++.||++....+ .|++++..++.
T Consensus 343 ~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 343 TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 776555543321111111234445667888765544 78888765543
No 226
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.23 E-value=0.01 Score=60.91 Aligned_cols=167 Identities=10% Similarity=0.073 Sum_probs=101.8
Q ss_pred CCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCC-CCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGG-RSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~-~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
...|+.+++++.....+ ..+..+++.+.++.|+++.... .....|++.++++...+.+.... . ...+++.|..+
T Consensus 42 ~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~ 116 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSR 116 (347)
T ss_dssp EEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSS
T ss_pred cceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCC
Confidence 45677777776443223 5667789998888888765411 01345899998876666555433 2 78899988777
Q ss_pred cEEEEccC-------------------------CCCeEEEEecCCCCc-EEEEeCCCCCCeeEEEeCCCCeEEEEcCC--
Q psy6570 85 RMFWTELG-------------------------IKPRISGASIDGKNK-FNLVDNNIQWPTGITIDYPSQRLYWADPK-- 136 (713)
Q Consensus 85 ~ly~td~~-------------------------~~~~I~~~~~dG~~~-~~l~~~~~~~p~glavd~~~~~LY~~d~~-- 136 (713)
.|+++... ...+|++.++++... +.+.. . ....+++++++ .+|.+...
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~ 192 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREI 192 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCS
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccc
Confidence 78877421 023788899887655 44544 3 66789999776 66666432
Q ss_pred ------CCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC-------CCcEEEEc
Q psy6570 137 ------ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR-------TNNILKIN 187 (713)
Q Consensus 137 ------~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~-------~~~i~~~~ 187 (713)
..+|+.++ .|. .+.+... . ....+..++.+|+++... ...|+.++
T Consensus 193 ~~~~~~~~~l~~~d-~~~-~~~l~~~-~---~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 193 IPQYFKFWDIYIWE-DGK-EEKMFEK-V---SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp SCCSSCCEEEEEEE-TTE-EEEEEEE-E---SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccccEEEeC-CCc-eEEeccC-c---ceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 34688888 443 3333322 1 112234556667665432 24577666
No 227
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.0049 Score=65.02 Aligned_cols=189 Identities=10% Similarity=0.075 Sum_probs=107.9
Q ss_pred cCCceeEEEccC---cccEE---ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce------EEEEE---cC
Q psy6570 5 SSGNVTRVKREM---NLKTV---LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK------KRTLL---NT 69 (713)
Q Consensus 5 ~~~~I~~~~~~~---~~~~~---~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~------~~~l~---~~ 69 (713)
.++.|...++.. ..+.+ ......+..|++.+.++.++++-. ..+.|.+.++.... ..... ..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG---NNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC---SSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc---CCCeEEEEECCCCccccccccccccccccC
Confidence 356677776665 11111 223345688999887444444544 46789998887654 21111 12
Q ss_pred CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC------CCCCeeEEEeCCCCeEEEEcCCCC---cE
Q psy6570 70 GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNN------IQWPTGITIDYPSQRLYWADPKAR---TI 140 (713)
Q Consensus 70 ~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~------~~~p~glavd~~~~~LY~~d~~~~---~I 140 (713)
....+..|++.|..+.++++-.... .|...++........+... ......|++++.+..++++-...+ .|
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSN-FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSS-CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCC-CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 2356778999987567777654434 7888888765444444322 455788999987765555544444 77
Q ss_pred EEEeCCCC-ceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 141 ESINLNGK-DRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 141 ~~~~~~g~-~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
...++... ........ ........+++. ++.++++-...+.|..++...+.....+.
T Consensus 243 ~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp CEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred EEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 77777653 22111110 112234556653 44555555566777777765554444433
No 228
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.14 E-value=0.035 Score=61.39 Aligned_cols=191 Identities=15% Similarity=0.102 Sum_probs=112.8
Q ss_pred CCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
++.|...+..+... .+...-..+.+|++.+.+..|.... ..+.|.+.+.+++....+... -....+|++.|.+.
T Consensus 365 dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~----~d~~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~d~~ 439 (577)
T 2ymu_A 365 DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS----DDKTVKLWNRNGQLLQTLTGH-SSSVWGVAFSPDDQ 439 (577)
T ss_dssp TSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEE----TTSEEEEECTTCCEEEEEECC-SSCEEEEEECTTSS
T ss_pred CCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCEEEEecCC-CCCeEEEEECCCCC
Confidence 34455555544322 2222344568899998766666544 367888999988776665533 35678899998665
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccce
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPY 164 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~ 164 (713)
+|..+. ... .|...++++.....+.. .......|++++++..|..+. ..+.|...+.+|.....+... .....
T Consensus 440 ~l~~~~-~d~-~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~las~~-~d~~i~iw~~~~~~~~~~~~h---~~~v~ 512 (577)
T 2ymu_A 440 TIASAS-DDK-TVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTGH---SSSVR 512 (577)
T ss_dssp EEEEEE-TTS-EEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSCEEEEEECC---SSCEE
T ss_pred EEEEEc-CCC-EEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCCCEEEEEeCC---CCCEE
Confidence 555443 333 67777888765555542 344568899998766665544 456788888888765555432 22334
Q ss_pred eeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEE
Q psy6570 165 KLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLI 209 (713)
Q Consensus 165 ~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v 209 (713)
.|++. +++++++-...+.|+..+.. +.....+......+..+.+
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~f 557 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAF 557 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCSSCEEEEEE
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEE
Confidence 55554 33344444455677777743 3334444433333444443
No 229
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.14 E-value=0.023 Score=58.63 Aligned_cols=176 Identities=9% Similarity=-0.030 Sum_probs=104.3
Q ss_pred CCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEc-CCCCCcceEEEcC
Q psy6570 6 SGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLN-TGLNEPYDIALEP 81 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~-~~~~~p~~iavD~ 81 (713)
++.|...++.....+. +. .......+++.+.+..++++-. ..+.|.+.++.... ...+.. .....+..+++.|
T Consensus 148 d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS---EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE---TTSCEEEEETTSSSCEEECC----CCCEEEEEECS
T ss_pred CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec---cccccccccccccceeeeeecceeeccceeeeecC
Confidence 4556666665433221 22 2344577888887777877766 56788888886433 333322 2234577899998
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
.++.++++-.... .|...++........+.......+.|++.+.+.++..+-...+.|...++.......+.. ...
T Consensus 225 ~~~~~l~sg~~dg-~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~---H~~ 300 (344)
T 4gqb_B 225 QQSEVFVFGDENG-TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA---HRD 300 (344)
T ss_dssp SCTTEEEEEETTS-EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC---CSS
T ss_pred CCCcceEEeccCC-cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC---CCC
Confidence 8888888755444 787777764433333333445568899998776666665566778888876554322211 122
Q ss_pred cceeeeee--CCeEEEEeCCCCcEEEEcc
Q psy6570 162 KPYKLEVF--EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 162 ~p~~i~~~--~~~ly~td~~~~~i~~~~~ 188 (713)
...+|++. +.+|+.+-...+.|+..+.
T Consensus 301 ~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 301 FVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 33455553 4567666555566655543
No 230
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.12 E-value=0.045 Score=60.50 Aligned_cols=171 Identities=14% Similarity=0.066 Sum_probs=104.2
Q ss_pred CCceeEEEccCcccEEec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC
Q psy6570 6 SGNVTRVKREMNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG 84 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~ 84 (713)
++.|...++.+.....+. ....+.++++.+.+..|.... ..+.|.+.+.+++....+... ...+.+|++.|...
T Consensus 324 d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----~dg~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~dg~ 398 (577)
T 2ymu_A 324 DKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS----DDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDGQ 398 (577)
T ss_dssp TSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTCCEEEEEECC-SSCEEEEEECTTSS
T ss_pred CCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe----CCCEEEEEcCCCCEEEEecCC-CCCeEEEEECCCCC
Confidence 445555565553322222 234457889988766665544 367888899988776665533 36688999998666
Q ss_pred cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccce
Q psy6570 85 RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPY 164 (713)
Q Consensus 85 ~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~ 164 (713)
+|..... .. .|...+.+++...++. ..-....+|++.+++.+|..+. ..+.|...+.++.....+... .....
T Consensus 399 ~l~~~~~-d~-~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~-~d~~v~~w~~~~~~~~~~~~~---~~~v~ 471 (577)
T 2ymu_A 399 TIASASD-DK-TVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDDQTIASAS-DDKTVKLWNRNGQLLQTLTGH---SSSVR 471 (577)
T ss_dssp CEEEEET-TS-EEEEECTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTSCEEEEEECC---SSCEE
T ss_pred EEEEEeC-CC-EEEEEeCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEc-CCCEEEEEECCCCEEEEEcCC---CCCEE
Confidence 6655443 23 6777777776555543 2344567899998776666554 456788888877655554432 22334
Q ss_pred eeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 165 KLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 165 ~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
.+++. ++.++.+-...+.|+..+.
T Consensus 472 ~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 472 GVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEET
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 55554 3444455445566666664
No 231
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.11 E-value=0.059 Score=55.42 Aligned_cols=188 Identities=11% Similarity=-0.039 Sum_probs=104.6
Q ss_pred cCCceeEEEccCcc----cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEE-EEE-cCCCCCcceEE
Q psy6570 5 SSGNVTRVKREMNL----KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR-TLL-NTGLNEPYDIA 78 (713)
Q Consensus 5 ~~~~I~~~~~~~~~----~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~-~l~-~~~~~~p~~ia 78 (713)
.++.|...++.+.. ..+......+..|++.+.+..|+.+. ..+.|.+.++...... .+. ......+..|+
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG----TDRNAYVWTLKGRTWKPTLVILRINRAARCVR 103 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE----TTSCEEEEEEETTEEEEEEECCCCSSCEEEEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc----CCCeEEEEECCCCeeeeeEEeecCCCceeEEE
Confidence 45677777777642 12223344568899998766666544 3577888887655422 222 22235678899
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcE---EEE-eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC-------
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKF---NLV-DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG------- 147 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~---~l~-~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g------- 147 (713)
+.+...+|+..... . .|...+++..... ..+ .........|++++.+..|+.+. ..+.|...++..
T Consensus 104 ~~~~~~~l~~~~~d-~-~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~ 180 (372)
T 1k8k_C 104 WAPNEKKFAVGSGS-R-VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-CDFKCRIFSAYIKEVEERP 180 (372)
T ss_dssp ECTTSSEEEEEETT-S-SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEECCCTTTSCCC
T ss_pred ECCCCCEEEEEeCC-C-EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc-CCCCEEEEEcccccccccc
Confidence 99876666665543 2 5666666554421 122 22244578899998666665554 456777777531
Q ss_pred ---------CceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeec
Q psy6570 148 ---------KDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLAN 199 (713)
Q Consensus 148 ---------~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~ 199 (713)
.....+............+++. ++.++++....+.|..++...+.....+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp CCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred cccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 1112222221112234555554 333445545667788887765555444443
No 232
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.11 E-value=0.11 Score=54.43 Aligned_cols=174 Identities=11% Similarity=-0.038 Sum_probs=101.0
Q ss_pred CCceeEEEccCcccEE-e-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKTV-L-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
++.|...++.....+. + ........|+++ .+.| ++-. ..+.|.+.++. +......+......+.+|++.|.
T Consensus 155 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVL-SSGS---RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEE-EEEE---TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred CCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEE-EEEc---CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC
Confidence 5566666666533222 2 222334555553 3444 4444 57889999987 33333333333467889999985
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC--CCCcEEEEeCCCCceeEEEecCCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP--KARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
...|+... ... .|...++........+.........|++.+.+..|+++-. ..+.|...++........... .
T Consensus 229 ~~~l~s~~-~d~-~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---~ 303 (401)
T 4aez_A 229 GLQLASGG-NDN-VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---G 303 (401)
T ss_dssp SSEEEEEE-TTS-CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---S
T ss_pred CCEEEEEe-CCC-eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---C
Confidence 44444443 333 6888888765554444444556789999988888888754 678899999865544333332 2
Q ss_pred ccceeeeee--CCeEEEEe-CCCCcEEEEcccC
Q psy6570 161 YKPYKLEVF--EDNLYFST-YRTNNILKINKFG 190 (713)
Q Consensus 161 ~~p~~i~~~--~~~ly~td-~~~~~i~~~~~~~ 190 (713)
.....+++. +..|+.+. ...+.|..++...
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 234455554 44454442 2456676666544
No 233
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.09 E-value=0.012 Score=60.98 Aligned_cols=158 Identities=12% Similarity=0.002 Sum_probs=94.8
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKN 106 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~ 106 (713)
....|++.+.+..|+... ..+.|.+.++........+.........|++.+....++++..... .|...++....
T Consensus 141 ~V~~v~~spdg~~l~sgs----~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg-~v~~wd~~~~~ 215 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGG----KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDG-RILLWDTRKPK 215 (357)
T ss_dssp CEEEEEECSSSSEEEEEE----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTS-CEEECCTTSSS
T ss_pred CEEEEEECCCCCEEEEEe----CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCC-ceEEEECCCCc
Confidence 457888988766565443 4678989998765554444444466788999877666666654433 67776665433
Q ss_pred cEEEEe--CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCc
Q psy6570 107 KFNLVD--NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNN 182 (713)
Q Consensus 107 ~~~l~~--~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~ 182 (713)
....+. .....+..|++.|.++.++.+-...+.|...++........+... ......|++. +.+++.+-...+.
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~--~~~v~~l~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH--SQNITGLAYSYHSSPFLASISEDCT 293 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC--SSCEEEEEECSSSSCCEEEEETTSC
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc--ceeEEEEEEcCCCCCEEEEEeCCCE
Confidence 222221 123346789999887777776666778888887654333222221 1122445543 4455555555667
Q ss_pred EEEEcccCC
Q psy6570 183 ILKINKFGN 191 (713)
Q Consensus 183 i~~~~~~~~ 191 (713)
|+..+...+
T Consensus 294 i~iwd~~~~ 302 (357)
T 4g56_B 294 VAVLDADFS 302 (357)
T ss_dssp EEEECTTSC
T ss_pred EEEEECCCC
Confidence 777776544
No 234
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.07 E-value=0.00021 Score=49.39 Aligned_cols=35 Identities=46% Similarity=0.973 Sum_probs=28.4
Q ss_pred CCCC---CCCCCCcEEcCCC--CCeeccCCCCCCCCCCccc
Q psy6570 507 KCDT---CTCLNGGTCIPNS--KNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 507 ~C~~---~~C~~~g~C~~~~--~~~~C~C~~g~~G~~C~~~ 542 (713)
.|.+ .||.+ |+|.... +.|.|.|++||+|.+|+..
T Consensus 5 ~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 5 KCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred cCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 4555 79998 8998643 5899999999999999853
No 235
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.024 Score=59.57 Aligned_cols=182 Identities=4% Similarity=-0.072 Sum_probs=105.7
Q ss_pred cCCceeEEEccCccc--EE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC----ceEEEEEcCCCCCcce
Q psy6570 5 SSGNVTRVKREMNLK--TV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG----RKKRTLLNTGLNEPYD 76 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~--~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~ 76 (713)
.++.|...++..... .+ ......+..|++.+.+..|+... ..+.|.+.+++. ......+.........
T Consensus 43 ~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 43 TDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL----DNGSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE----SSSCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc----cCCeEEEeecccccccccchhhccCCccceEE
Confidence 456788888776431 11 23344567889988766666554 357888888876 2222223233456789
Q ss_pred EEEcCCCCcEEEEccCCCCeEEEEecCCCC------cEEEE---eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 77 IALEPLSGRMFWTELGIKPRISGASIDGKN------KFNLV---DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 77 iavD~~~~~ly~td~~~~~~I~~~~~dG~~------~~~l~---~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
|++.|.++.++++-.... .|...++.... ....+ .........|++++..+.++++-...+.|...++..
T Consensus 119 ~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNG-EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp EEECSSSTTBEEEECSSS-CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred EEEcCCCCCEEEEEcCCC-eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 999987455555543333 67777776543 21111 122345688999987566777766678899988876
Q ss_pred CceeEEEecCCC----Cccceeeeee--CCeEEEEeCCCC---cEEEEcccCC
Q psy6570 148 KDRFVVYHTEDN----GYKPYKLEVF--EDNLYFSTYRTN---NILKINKFGN 191 (713)
Q Consensus 148 ~~~~~~~~~~~~----~~~p~~i~~~--~~~ly~td~~~~---~i~~~~~~~~ 191 (713)
............ ......+++. +..++++....+ .|..++....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 544333322110 1233455554 334555554444 6666665543
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.05 E-value=0.021 Score=57.94 Aligned_cols=162 Identities=14% Similarity=0.204 Sum_probs=95.6
Q ss_pred eeEEEccCcccE-EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEE
Q psy6570 9 VTRVKREMNLKT-VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMF 87 (713)
Q Consensus 9 I~~~~~~~~~~~-~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly 87 (713)
|++++.++.... ..........++++ ++.||+... .+.|++++++|+...... ........+++|+ ++.||
T Consensus 80 l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~----~~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~ 151 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSM----DGHLYAINTDGTEKWRFK-TKKAIYATPIVSE-DGTIY 151 (330)
T ss_dssp EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEECT----TSEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEE
T ss_pred EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEec----CCEEEEEcCCCCEEEEEc-CCCceeeeeEEcC-CCEEE
Confidence 777776553311 11111112344554 678887654 578999998865543333 2223456678874 67788
Q ss_pred EEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeee
Q psy6570 88 WTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLE 167 (713)
Q Consensus 88 ~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~ 167 (713)
+.... . .|++++.+|+.+..+ .........+++| .+++||++. +.|++++.+|......... .....++.
T Consensus 152 vgt~~-~-~l~~~d~~g~~~~~~-~~~~~~~~~~~~d-~~g~l~v~t---~~l~~~d~~g~~~~~~~~~---~~~~~~~~ 221 (330)
T 3hxj_A 152 VGSND-N-YLYAINPDGTEKWRF-KTNDAITSAASIG-KDGTIYFGS---DKVYAINPDGTEKWNFYAG---YWTVTRPA 221 (330)
T ss_dssp EECTT-S-EEEEECTTSCEEEEE-ECSSCCCSCCEEC-TTCCEEEES---SSEEEECTTSCEEEEECCS---SCCCSCCE
T ss_pred EEcCC-C-EEEEECCCCCEeEEE-ecCCCceeeeEEc-CCCEEEEEe---CEEEEECCCCcEEEEEccC---CcceeceE
Confidence 86642 3 799998885443333 2233445678887 467898887 7899999666543332211 23345666
Q ss_pred eeC-CeEEEEeCCCCcEEEEccc
Q psy6570 168 VFE-DNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 168 ~~~-~~ly~td~~~~~i~~~~~~ 189 (713)
++. +.||++.. .+.|+++++.
T Consensus 222 ~~~~g~l~v~t~-~~gl~~~~~~ 243 (330)
T 3hxj_A 222 ISEDGTIYVTSL-DGHLYAINPD 243 (330)
T ss_dssp ECTTSCEEEEET-TTEEEEECTT
T ss_pred ECCCCeEEEEcC-CCeEEEECCC
Confidence 664 47877754 4678888653
No 237
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.04 E-value=0.0091 Score=68.66 Aligned_cols=161 Identities=8% Similarity=-0.015 Sum_probs=93.0
Q ss_pred CceEEEeccCCeEEEeecCCC-----------------------------CCCeEEEEecCC-ceEEEEEcC--CCCCcc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGR-----------------------------SSNNIMVSTLEG-RKKRTLLNT--GLNEPY 75 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~-----------------------------~~~~I~~~~~~G-~~~~~l~~~--~~~~p~ 75 (713)
+.++++.+.++.|+++..... ....|.+.++++ ...+.+... ....+.
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 290 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLA 290 (741)
T ss_dssp CCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEE
T ss_pred ccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEE
Confidence 578999999888888753110 011677788776 554444322 123456
Q ss_pred eEEEcCCCCcEEEEcc--C-CCCeEEEEecCCCCcEEEEeCCCC----CCeeEEEeCCCCeEEEEcC-CCCcEEEEeCCC
Q psy6570 76 DIALEPLSGRMFWTEL--G-IKPRISGASIDGKNKFNLVDNNIQ----WPTGITIDYPSQRLYWADP-KARTIESINLNG 147 (713)
Q Consensus 76 ~iavD~~~~~ly~td~--~-~~~~I~~~~~dG~~~~~l~~~~~~----~p~glavd~~~~~LY~~d~-~~~~I~~~~~~g 147 (713)
.+++ |...+|+++.. . ....|++.++++...+.++..... ....+++.+++..||.++. +..+|+.++++|
T Consensus 291 ~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 291 RVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG 369 (741)
T ss_dssp EEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS
T ss_pred EEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC
Confidence 7888 87788887643 1 224788888887666555532211 3357899987664444443 335799998887
Q ss_pred CceeEEEecCCCCccceeeeeeCCeEEEEeCCC----CcEEEEcccC
Q psy6570 148 KDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRT----NNILKINKFG 190 (713)
Q Consensus 148 ~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~----~~i~~~~~~~ 190 (713)
. ...+.........+..++.+++.||++.... ..|+.++..+
T Consensus 370 ~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 370 K-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp C-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred C-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 7 4443322111111123344466777765432 3467766433
No 238
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.03 E-value=0.095 Score=52.62 Aligned_cols=186 Identities=10% Similarity=0.002 Sum_probs=102.8
Q ss_pred CCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++.+...+. +. .-.....+++.+.++.|+.. . ..+.|.+.+++.......+.........|++.|..
T Consensus 34 dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s---~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 34 SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-S---DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-E---TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEE-C---CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC
Confidence 4566666665533221 22 22334678888776666544 3 46889999987544433333334668899999865
Q ss_pred CcEEEEccCCCCeEEEEecCCCCc-EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNK-FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
.+|+ +-.... .|..-++..... ...+.........++++|.++.++++-...+.|...++............. ...
T Consensus 110 ~~l~-sgs~D~-~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~ 186 (304)
T 2ynn_A 110 PYVL-SGSDDL-TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ-ERG 186 (304)
T ss_dssp SEEE-EEETTS-CEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCC-TTC
T ss_pred CEEE-EECCCC-eEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCC-cCc
Confidence 5554 433333 677777664432 233333445568899998666666666667788888875443322222111 111
Q ss_pred ceeeeee---CCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 163 PYKLEVF---EDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 163 p~~i~~~---~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
...+++. ++.++++-...+.|...+...+.....+.
T Consensus 187 v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence 1223322 33455555566777777765544444333
No 239
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.02 E-value=0.15 Score=51.22 Aligned_cols=188 Identities=9% Similarity=-0.058 Sum_probs=105.9
Q ss_pred CCceeEEEccCcccE--EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc-eEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKT--VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR-KKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~--~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~-~~~~l~~~~~~~p~~iavD~~ 82 (713)
++.|...++.....+ +...-.....|++.+.+..|+ +-. ..+.|.+.++... .....+.........++++|.
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs---~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL-SGS---DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE-EEE---TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEE-EEC---CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 456666666654322 222334467899988765554 444 4678888887654 333334333456788999987
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcE-EEEeCCCCCCeeEEEeCC-CCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKF-NLVDNNIQWPTGITIDYP-SQRLYWADPKARTIESINLNGKDRFVVYHTEDNG 160 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~-~l~~~~~~~p~glavd~~-~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 160 (713)
++.++.+-.... .|...++...... .+..........+++.+. ++.+.++-...+.|...++........+.. ..
T Consensus 152 ~~~~l~sgs~D~-~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~--h~ 228 (304)
T 2ynn_A 152 DPSTFASGCLDR-TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG--HM 228 (304)
T ss_dssp CTTEEEEEETTS-EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC--CS
T ss_pred CCCEEEEEeCCC-eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC--CC
Confidence 777777655444 7777777544333 333222233455666653 334445555667788888765433222222 11
Q ss_pred ccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeecc
Q psy6570 161 YKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANN 200 (713)
Q Consensus 161 ~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~ 200 (713)
.....+++. .+.++++-...+.|...+.........+...
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 222344444 3445666666777887776655544444433
No 240
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.01 E-value=0.083 Score=55.39 Aligned_cols=183 Identities=9% Similarity=-0.022 Sum_probs=105.3
Q ss_pred ccCCceeEEEccCccc------EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc--------eEEEEEcC
Q psy6570 4 ISSGNVTRVKREMNLK------TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR--------KKRTLLNT 69 (713)
Q Consensus 4 ~~~~~I~~~~~~~~~~------~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~--------~~~~l~~~ 69 (713)
..++.|..++++...+ ++......+..|++.+.++.++++-. ..+.|.+.++... ....+. .
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---~dg~v~vw~~~~~~~~~~~~~~~~~~~-~ 129 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS---EDCTVMVWEIPDGGLVLPLREPVITLE-G 129 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE---TTSEEEEEECCTTCCSSCBCSCSEEEE-C
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe---CCCeEEEEEccCCCCccccCCceEEec-C
Confidence 3467777777654211 11122344678888873455555555 5678888887654 223333 3
Q ss_pred CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE--eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 70 GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLV--DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 70 ~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~--~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
....+..|++.|....++++-.... .|...++........+ .........|++++.+..|+.+. ..+.|...++..
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 207 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRK 207 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTS-CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTT
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCC-EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCC
Confidence 3467889999987655666554434 6888887755443333 22344568899998666666554 557888888765
Q ss_pred CceeEEEecCCCCccceeeeee-CCeEEEEe---CCCCcEEEEcccCCC
Q psy6570 148 KDRFVVYHTEDNGYKPYKLEVF-EDNLYFST---YRTNNILKINKFGNS 192 (713)
Q Consensus 148 ~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td---~~~~~i~~~~~~~~~ 192 (713)
...............+..+.+. ++.++.+. ...+.|..++.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 4433322111112224555554 44555554 456667777665433
No 241
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.062 Score=55.00 Aligned_cols=145 Identities=6% Similarity=0.004 Sum_probs=84.9
Q ss_pred cCCceeEEEccCccc-EEecCCCCCceEEEeccCCeEEEeecC-CCCCCeEEEEecCCce------------EEEEE-cC
Q psy6570 5 SSGNVTRVKREMNLK-TVLSNLHDPRGVAVDWVGKNLYWTDAG-GRSSNNIMVSTLEGRK------------KRTLL-NT 69 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~-~~~~~~~~p~gla~D~~~~~ly~td~~-~~~~~~I~~~~~~G~~------------~~~l~-~~ 69 (713)
.++.|...++..... ........+..+++.+.+..|+.+... ....+.|.+.++.... ...+. ..
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred CCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 355677777665432 224455567889998877666655431 0012667776654321 11111 11
Q ss_pred CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC-CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 70 GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG-KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 70 ~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
....+..+++++....|+..... . .|...++.. ......+.........|++++...+|+.+. ..+.|...++...
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~d-g-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKD-G-KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTL 250 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETT-S-EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC
T ss_pred CccceeEEEEcCCCCEEEEEcCC-C-EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec-CCceEEEEECCCC
Confidence 22367889999866666665432 3 788888876 333333344455678899998766666554 5567888888654
Q ss_pred ceeE
Q psy6570 149 DRFV 152 (713)
Q Consensus 149 ~~~~ 152 (713)
....
T Consensus 251 ~~~~ 254 (369)
T 3zwl_B 251 QVLK 254 (369)
T ss_dssp CEEE
T ss_pred ceee
Confidence 4433
No 242
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.99 E-value=0.014 Score=60.48 Aligned_cols=177 Identities=11% Similarity=0.024 Sum_probs=103.3
Q ss_pred CCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEc--CCCCCcceEEEcC
Q psy6570 6 SGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN--TGLNEPYDIALEP 81 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~--~~~~~p~~iavD~ 81 (713)
++.|...++.....+. +. .......|++.+.++.++++-. ..+.|.+.++........+. .....+..|++.|
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~---~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp 236 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG---EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHP 236 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE---TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec---cCCceEEEECCCCceeeeeeeccccccccchhhhh
Confidence 4455555555432221 22 2344677888777666666666 56778888775433221111 1224577899998
Q ss_pred CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 82 LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 82 ~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
.++.++.+-.... .|...++........+.........|++.+..+++..+-...+.|+..+++......+... ..
T Consensus 237 ~~~~~la~g~~d~-~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H---~~ 312 (357)
T 4g56_B 237 EKDDTFACGDETG-NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSH---RD 312 (357)
T ss_dssp TSTTEEEEEESSS-CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCC---SS
T ss_pred cccceEEEeeccc-ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCC---CC
Confidence 8787777654434 6777777654443333334445688999987766665555667788888765433222211 22
Q ss_pred cceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 162 KPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 162 ~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
...+|++. ++.++++-...+.|+..+..
T Consensus 313 ~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 34566653 45666666666777666643
No 243
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.98 E-value=0.0008 Score=53.78 Aligned_cols=68 Identities=29% Similarity=0.771 Sum_probs=52.5
Q ss_pred CCCCCCCCCCcEEee-cCCCceeeCCCCCcC--CCCCcCCCCCCC---CCCCCCCCeEecCCC----CcceeecCCCcc
Q psy6570 554 KCTPNYCSNNGTCVL-IEGKPSCKCLPPYSG--KQCTEREDSPSC---HNYCDNAGLCSYSKQ----GKPVCTCVNGWS 622 (713)
Q Consensus 554 ~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~G--~~C~~~~~~~~C---~~~C~~~g~C~~~~~----g~~~C~C~~G~~ 622 (713)
.|....|+.++.|.. .+|..+|.|.+||.| ..|.... .+.| ...|+.+++|....+ +...|.|++||.
T Consensus 6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~-~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP-NPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECS-CCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCC-CCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 355556888999988 478999999999984 4676641 2567 356999999987765 578999999974
No 244
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.96 E-value=0.0005 Score=49.32 Aligned_cols=31 Identities=23% Similarity=0.505 Sum_probs=26.6
Q ss_pred ccCCCCC----------CCCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 219 VTNHCDD----------KPCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 219 ~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
.+|+|.. .+| .++|+|++|+|+|.|++||.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C--~~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQC--QHLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTT--SSEEEEETTEEEEECSTTCEE
T ss_pred ccccccCcccccccccCCCC--CCEeECCCCCeEEECCCCCeE
Confidence 4678875 578 579999999999999999985
No 245
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.96 E-value=0.12 Score=52.45 Aligned_cols=173 Identities=10% Similarity=0.023 Sum_probs=97.2
Q ss_pred CCceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
.+.|...++....... .........|++.+.+..|+... ..+.|.+.++........+.........|++.|..
T Consensus 143 dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~----~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA----IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 218 (321)
T ss_dssp TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS
T ss_pred CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc----CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC
Confidence 3455555555433221 22334467888988766665444 46789999987554433333333557899999855
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
.+|+... ... .|...++........+.........|++.+.+..|+.+ ...+.|...++........+.. .....
T Consensus 219 ~~l~s~s-~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~--h~~~v 293 (321)
T 3ow8_A 219 QLLVTAS-DDG-YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSS-SSDKSVKVWDVGTRTCVHTFFD--HQDQV 293 (321)
T ss_dssp CEEEEEC-TTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECC--CSSCE
T ss_pred CEEEEEc-CCC-eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCEEEEEEcC--CCCcE
Confidence 5444443 333 67777877655544444445567889999876665544 4456787777754432222211 12233
Q ss_pred eeeeee-CCeEEEEeCCCCcEEEEc
Q psy6570 164 YKLEVF-EDNLYFSTYRTNNILKIN 187 (713)
Q Consensus 164 ~~i~~~-~~~ly~td~~~~~i~~~~ 187 (713)
.++++. ++.++++-...+.|...+
T Consensus 294 ~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 294 WGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEe
Confidence 555554 334444444555555443
No 246
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.96 E-value=0.0066 Score=65.62 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=74.5
Q ss_pred CCCCcceEEEcCCCCcEEEEccCC--------------------CCeEEEEecCCCCc-------EEEEe----------
Q psy6570 70 GLNEPYDIALEPLSGRMFWTELGI--------------------KPRISGASIDGKNK-------FNLVD---------- 112 (713)
Q Consensus 70 ~~~~p~~iavD~~~~~ly~td~~~--------------------~~~I~~~~~dG~~~-------~~l~~---------- 112 (713)
.+.+|.+|+++|.++.||++-.++ .++|++...++... ..++.
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 367899999999999999985431 26799998865321 22221
Q ss_pred -----------CCCCCCeeEEEeCCCCeEEE-EcCC-----------CCcEEEEeCCCCceeEEEecCCCCccceeeeee
Q psy6570 113 -----------NNIQWPTGITIDYPSQRLYW-ADPK-----------ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF 169 (713)
Q Consensus 113 -----------~~~~~p~glavd~~~~~LY~-~d~~-----------~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~ 169 (713)
..|..|++|+||+ .+.||+ +|.. .+.|++++.+....+.++.... ...|.||.+.
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-~aEpnGiafS 539 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFS 539 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEEC
T ss_pred cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-CccccCCEEC
Confidence 1378899999995 588999 8863 3479999886555655654322 3456777765
Q ss_pred --CCeEEEEeCC
Q psy6570 170 --EDNLYFSTYR 179 (713)
Q Consensus 170 --~~~ly~td~~ 179 (713)
+..||++-..
T Consensus 540 PD~ktLfV~vQH 551 (592)
T 4a9v_A 540 PDQKTLFVGIQH 551 (592)
T ss_dssp TTSSEEEEEEES
T ss_pred CCCCEEEEEEeC
Confidence 6689987533
No 247
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.95 E-value=0.25 Score=49.45 Aligned_cols=186 Identities=8% Similarity=-0.080 Sum_probs=102.6
Q ss_pred CCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++..... .+.........+++.+.+..|+... ..+.|.+.++........+.........|++++..
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS----FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe----CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 45566666554321 1222334456788887766665444 46789999987544433333333456789998755
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEE-EEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFN-LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~-l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
..|+... ... .|...++....... +..........+++++.+..|+.+. ..+.|...++.................
T Consensus 162 ~~l~~~~-~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~ 238 (312)
T 4ery_A 162 SLIVSSS-YDG-LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDYSKGKCLKTYTGHKNEKY 238 (312)
T ss_dssp SEEEEEE-TTS-CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-TTTEEEEEETTTTEEEEEECSSCCSSS
T ss_pred CEEEEEe-CCC-cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEEecCCceE
Confidence 5454443 333 67777776544332 3222333456789998776666554 456788888765443332222111111
Q ss_pred cee--eeeeCCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 163 PYK--LEVFEDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 163 p~~--i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
... +...++.++++-...+.|+..+...+.....+.
T Consensus 239 ~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 239 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp CCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh
Confidence 111 122345566666667778888766555444443
No 248
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.95 E-value=0.00019 Score=51.33 Aligned_cols=33 Identities=33% Similarity=0.807 Sum_probs=23.4
Q ss_pred CCCCCCCCcEec--cCCCCccccCCCCCcCCCCcc
Q psy6570 419 LNLKCQNGGVCV--NKTTGLECDCPKFYYGKNCQY 451 (713)
Q Consensus 419 ~~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~C~~ 451 (713)
.+.||.++|+|+ +..++|.|.|++||+|..|+.
T Consensus 10 ~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp TCCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 345677777776 556667777777777777763
No 249
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.064 Score=56.18 Aligned_cols=178 Identities=10% Similarity=-0.033 Sum_probs=102.4
Q ss_pred CCceeEEEccCcccEEec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCC-----------
Q psy6570 6 SGNVTRVKREMNLKTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNE----------- 73 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~----------- 73 (713)
++.|...+..+.....+. ....+..|++.+.+..|+.+.. .+.|.+.++........+......
T Consensus 129 dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 129 NGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV----ENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp TSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEET----TCCEEEEETTTTEEEEEECCC--------------
T ss_pred CCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEec----CCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 456666664443322222 3445678999887666765553 678888888655444333322222
Q ss_pred ----cceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc
Q psy6570 74 ----PYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD 149 (713)
Q Consensus 74 ----p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~ 149 (713)
+..+++.+. +.|+.... .. .|...++........+.........|++++.+..|+.+. ..+.|...++....
T Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~-~g-~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 205 DGSLGVDVEWVDD-DKFVIPGP-KG-AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGN 280 (425)
T ss_dssp -CCCBSCCEEEET-TEEEEECG-GG-CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBS
T ss_pred CcceeeEEEEcCC-CEEEEEcC-CC-eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCc
Confidence 677888763 45444433 23 688888876555444444445568899998766666554 55678888876544
Q ss_pred eeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 150 RFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 150 ~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
....... .......+++..+.++++....+.|..++...+..
T Consensus 281 ~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 281 SQNCFYG--HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp CSEEECC--CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEE
T ss_pred cceEecC--CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcE
Confidence 3333322 12234556655333555555667777777654433
No 250
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.92 E-value=0.0049 Score=64.49 Aligned_cols=180 Identities=13% Similarity=0.125 Sum_probs=98.8
Q ss_pred CceeEEEccCcccEEecC-CCCC-ceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCC-Ccce--E----
Q psy6570 7 GNVTRVKREMNLKTVLSN-LHDP-RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN-EPYD--I---- 77 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~~~~-~~~p-~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~-~p~~--i---- 77 (713)
..|+.+++.+.....+.. .... .++++.+.++.|+++.. ...|++.++++...+.+...... .|.+ |
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~----~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~ 135 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN----ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSD 135 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET----TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTT
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc----CCcEEEEECCCCCcEEEEecccccCCCCCEEEecc
Confidence 356666766544322222 2222 23778888888877765 34799999987666555542211 1221 1
Q ss_pred ------------EEcCCCCcEEEEcc---CCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeC-CCCeEEEEcC-CC---
Q psy6570 78 ------------ALEPLSGRMFWTEL---GIKPRISGASIDGKNKFNLVDNNIQWPTGITIDY-PSQRLYWADP-KA--- 137 (713)
Q Consensus 78 ------------avD~~~~~ly~td~---~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~-~~~~LY~~d~-~~--- 137 (713)
++.|..+.|++... .....|++.++++...+.+.. .......+++++ .+++|+++.. ..
T Consensus 136 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (396)
T 3c5m_A 136 CTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLV 214 (396)
T ss_dssp SSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSC
T ss_pred CCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCC
Confidence 12333344444331 223378899988766655553 334567889988 5666766542 22
Q ss_pred -CcEEEEeCCCCceeEEEecCCCCccceeeee--eCCeEEEEeC--CCCc--EEEEcccCCC
Q psy6570 138 -RTIESINLNGKDRFVVYHTEDNGYKPYKLEV--FEDNLYFSTY--RTNN--ILKINKFGNS 192 (713)
Q Consensus 138 -~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~--~~~~ly~td~--~~~~--i~~~~~~~~~ 192 (713)
.+|+.+++++...+.+.... ....+..+++ ++.+|+++.. .... |+.++..++.
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 215 DARMWLVNEDGSNVRKIKEHA-EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp SCCCEEEETTSCCCEESSCCC-TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred CceEEEEECCCCceeEeeccC-CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 57999999887655443311 0112333333 4556666532 2333 7777765543
No 251
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.91 E-value=0.019 Score=65.94 Aligned_cols=120 Identities=10% Similarity=0.081 Sum_probs=85.0
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCC-----eEEEEecCCceEEEEEcCCCC------------------------Ccc
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSN-----NIMVSTLEGRKKRTLLNTGLN------------------------EPY 75 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~-----~I~~~~~~G~~~~~l~~~~~~------------------------~p~ 75 (713)
...+..+++.+.++.|+++.. ..+ .|.+.++++...+.++..... ...
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~---~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRG---KDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEEC---CSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEec---cCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 335788999998888887764 233 799999987665555532211 257
Q ss_pred eEEEcCCCCcEEEEccCCCCeEEEEecCCC---CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeE
Q psy6570 76 DIALEPLSGRMFWTELGIKPRISGASIDGK---NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFV 152 (713)
Q Consensus 76 ~iavD~~~~~ly~td~~~~~~I~~~~~dG~---~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~ 152 (713)
.+++.|..++|+++.. ..|++.++++. ..+.+.. ....+..++++|++++|+++.. +.|+.+++++.....
T Consensus 113 ~~~~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQ 186 (741)
T ss_dssp CCEECTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEE
T ss_pred eeEECCCCCEEEEEeC---CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEE
Confidence 8999998888888775 38999999876 4444432 2345788999999988887763 479999988765444
Q ss_pred E
Q psy6570 153 V 153 (713)
Q Consensus 153 ~ 153 (713)
+
T Consensus 187 ~ 187 (741)
T 2ecf_A 187 L 187 (741)
T ss_dssp C
T ss_pred e
Confidence 4
No 252
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.91 E-value=0.065 Score=55.70 Aligned_cols=182 Identities=10% Similarity=0.044 Sum_probs=109.6
Q ss_pred cCCceeEEEccCcccEE-ec---CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC--CCCcceEE
Q psy6570 5 SSGNVTRVKREMNLKTV-LS---NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG--LNEPYDIA 78 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~---~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~--~~~p~~ia 78 (713)
.++.|...++.+..... .. ....+.+|++.+.++.++++-. ..+.|.+.++.+.....+.... ...+..|+
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS---IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE---TTTEEEEEETTSCEEEEEECCCCSSCCEEEEE
T ss_pred CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe---CCCEEEEEECCCCceEEEeccCCCCCCeEEEE
Confidence 35677777777543322 22 3344577888774445555545 5788999999987666555332 24578899
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC----CceeEEE
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG----KDRFVVY 154 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g----~~~~~~~ 154 (713)
+.|....|+... ... .|...++++.....+. ........|++++.+..++++-...+.|...++.. .......
T Consensus 171 ~~~~~~~l~~~~-~d~-~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (383)
T 3ei3_B 171 VSVSRQMLATGD-STG-RLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM 247 (383)
T ss_dssp EETTTTEEEEEE-TTS-EEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE
T ss_pred ECCCCCEEEEEC-CCC-CEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe
Confidence 998665555544 333 7888888766544443 34456789999987774666666677788888753 1111112
Q ss_pred ecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCCcce
Q psy6570 155 HTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNSDFN 195 (713)
Q Consensus 155 ~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~~~~ 195 (713)
.. ......+++. .+.++++....+.|..++...+....
T Consensus 248 ~~---~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 248 PH---EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EC---SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred cC---CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 21 2234555554 33444554556778877766554433
No 253
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.91 E-value=0.0056 Score=68.28 Aligned_cols=116 Identities=12% Similarity=-0.033 Sum_probs=78.3
Q ss_pred ceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcE
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKF 108 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~ 108 (713)
..+++++.++.|+++.........|++.++++...+.+. ........+++.|.++.|+.++.....+|++.++++...+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 789999998888866541112256999998876666554 3334568899999877888665544347999999987766
Q ss_pred EEEeCCCCCCeeEE--------EeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 109 NLVDNNIQWPTGIT--------IDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 109 ~l~~~~~~~p~gla--------vd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
++......+.+++ +++++ +||++-...+++....+ |.
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 232 -DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp -ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE
T ss_pred -EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC
Confidence 4433233344566 99877 77777655566666666 53
No 254
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.88 E-value=0.19 Score=50.39 Aligned_cols=177 Identities=6% Similarity=-0.066 Sum_probs=96.8
Q ss_pred CCceeEEEccCcc-c-EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNL-K-TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~-~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...+..... . .+.........|++.+.++.|+... ..+.|.+.+++.......+.........+++.|..
T Consensus 44 dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS----DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC----CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 4455555544322 1 1222333467888888765555443 46789999987554433343334567789999865
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEecCCCCcc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHTEDNGYK 162 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~ 162 (713)
..|+.... .. .|...++........+.........|++++....|+.+. ..+.|...++..... ..+.... ...
T Consensus 120 ~~l~s~~~-d~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~--~~~ 194 (312)
T 4ery_A 120 NLIVSGSF-DE-SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQCLKTLIDDD--NPP 194 (312)
T ss_dssp SEEEEEET-TS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCSS--CCC
T ss_pred CEEEEEeC-CC-cEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCceeeEEeccC--CCc
Confidence 55554443 23 688888765544444433344567899997665555544 556788888754332 2222211 111
Q ss_pred ceeeeee-CCeEEEEeCCCCcEEEEcccCC
Q psy6570 163 PYKLEVF-EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 163 p~~i~~~-~~~ly~td~~~~~i~~~~~~~~ 191 (713)
...+++. .+.++++....+.|..++...+
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 2234443 2334444445566766665443
No 255
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.88 E-value=0.058 Score=62.49 Aligned_cols=183 Identities=9% Similarity=-0.012 Sum_probs=109.0
Q ss_pred cCCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...+..+... .+...-.....+++.+.+..|..+.. .+.|.+.+++.......+......+..|++.|.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD----DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC
Confidence 356677777655332 22223445688999988777776653 688999998654443333333467889999987
Q ss_pred CCcEEEEccCCCCeEEEEecCCC-CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc
Q psy6570 83 SGRMFWTELGIKPRISGASIDGK-NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY 161 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 161 (713)
..+|+..... . .|...+++.. .....+.........+++++.++.++++-...+.|...++............. ..
T Consensus 109 ~~~l~~~~~d-g-~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~~ 185 (814)
T 3mkq_A 109 KPYVLSGSDD-L-TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ-ER 185 (814)
T ss_dssp SSEEEEEETT-S-EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCC-TT
T ss_pred CCEEEEEcCC-C-EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCC-CC
Confidence 6666655432 3 6777777765 33334444455678899997556566665566788888886544333332211 12
Q ss_pred cceeeeee---CCeEEEEeCCCCcEEEEcccCCCcc
Q psy6570 162 KPYKLEVF---EDNLYFSTYRTNNILKINKFGNSDF 194 (713)
Q Consensus 162 ~p~~i~~~---~~~ly~td~~~~~i~~~~~~~~~~~ 194 (713)
....+++. ++.++++-...+.|..++...+...
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp CCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 23334442 3445555555667777765544333
No 256
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.88 E-value=0.22 Score=51.20 Aligned_cols=176 Identities=11% Similarity=0.086 Sum_probs=98.8
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC-CCcEEEEccCCCCeEEEEecCCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL-SGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~-~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
....+++.+.+..|+ +-. ..+.|.+.++........+.........+++.|. .+.++++-.... .|...++...
T Consensus 156 ~v~~~~~~~~~~~l~-t~s---~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-~v~~wd~~~~ 230 (354)
T 2pbi_B 156 YLSACSFTNSDMQIL-TAS---GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK-KAMVWDMRSG 230 (354)
T ss_dssp CEEEEEECSSSSEEE-EEE---TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS-CEEEEETTTC
T ss_pred cEEEEEEeCCCCEEE-EEe---CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC-eEEEEECCCC
Confidence 346677776655555 444 4678888887654433333332345667788764 345666554433 6888887655
Q ss_pred CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEE
Q psy6570 106 NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNIL 184 (713)
Q Consensus 106 ~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~ 184 (713)
.....+.......+.|+++|....|+.+ ...+.|...++.......+............+++. .+.++.+....+.|.
T Consensus 231 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~ 309 (354)
T 2pbi_B 231 QCVQAFETHESDVNSVRYYPSGDAFASG-SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN 309 (354)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cEEEEecCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEE
Confidence 4444444344567889999766555544 45677888887654433333322112223445544 345555555667788
Q ss_pred EEcccCCCcceeeeccccccccEE
Q psy6570 185 KINKFGNSDFNVLANNLNRASDVL 208 (713)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~i~ 208 (713)
.++...+.....+......+..+.
T Consensus 310 vwd~~~~~~~~~l~~h~~~v~~l~ 333 (354)
T 2pbi_B 310 VWDVLKGSRVSILFGHENRVSTLR 333 (354)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEE
T ss_pred EEECCCCceEEEEECCCCcEEEEE
Confidence 887655555444443333333333
No 257
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.19 Score=51.23 Aligned_cols=183 Identities=7% Similarity=0.005 Sum_probs=102.9
Q ss_pred cCCceeEEEccCcccE-Eec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNLKT-VLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~-~~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...++.....+ .+. .......|++.+.+..|+.+. ..+.|.+.+++.......+. ....+..|++.|.
T Consensus 52 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS----ADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPC 126 (369)
T ss_dssp SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTT
T ss_pred CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCcEEEEee-cCCCeEEEEEccC
Confidence 3566777776653322 122 344567889988666665444 46789999987655444443 3367889999987
Q ss_pred CCcEEEEccC---CCCeEEEEecCCCC------------cEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 83 SGRMFWTELG---IKPRISGASIDGKN------------KFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 83 ~~~ly~td~~---~~~~I~~~~~dG~~------------~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
...|+.+... ..+.|...+++... ...+.. ........+++++....|+.+. ..+.|..+++.
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~ 205 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVS 205 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETT
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECC
Confidence 6666665432 01256655554322 111111 1122678899998777776655 45788888887
Q ss_pred CC-ceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcce
Q psy6570 147 GK-DRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFN 195 (713)
Q Consensus 147 g~-~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~ 195 (713)
.. ........ .......+++. ++.++++....+.|..++...+....
T Consensus 206 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 206 NNYEYVDSIDL--HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp TTTEEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEeEEEEec--CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 52 22222222 12234455554 33444444556677777765544433
No 258
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.83 E-value=0.00032 Score=50.09 Aligned_cols=32 Identities=31% Similarity=0.845 Sum_probs=25.6
Q ss_pred CCCCCCCcEEe--ecCCCceeeCCCCCcCCCCCc
Q psy6570 557 PNYCSNNGTCV--LIEGKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 557 ~~~C~~~~~C~--~~~g~~~C~C~~G~~G~~C~~ 588 (713)
+++|.++|+|. +..++|.|.|++||+|..|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 45788888997 456678899999999988875
No 259
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.78 E-value=0.22 Score=52.48 Aligned_cols=195 Identities=6% Similarity=-0.052 Sum_probs=106.4
Q ss_pred CCceeEEEccCcccE--EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKT--VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~--~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++.+...+ +.........|++.+.++.|+ +-. ..+.|.+.++........+.........+++.+ +
T Consensus 171 D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~-s~s---~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~ 245 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV-SAS---RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-D 245 (410)
T ss_dssp TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEE-EEE---TTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-T
T ss_pred CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEE-EEe---CCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-C
Confidence 445555555443211 111233467788887655554 444 467899998865443333333335567788886 4
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCC-------------------CeEEEEcCCCCcEEEEe
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPS-------------------QRLYWADPKARTIESIN 144 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~-------------------~~LY~~d~~~~~I~~~~ 144 (713)
+.++++-.... .|...++........+.........|++.+.. +.++++-...+.|...+
T Consensus 246 g~~l~s~s~D~-~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd 324 (410)
T 1vyh_C 246 GTLIASCSNDQ-TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324 (410)
T ss_dssp SSEEEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred CCEEEEEcCCC-eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEE
Confidence 55555544433 67777776554444443344455677777642 34555656667788888
Q ss_pred CCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEE
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVL 208 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 208 (713)
+........+.. ......++++. .+.++++....+.|...+...+.....+......+..+.
T Consensus 325 ~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~ 387 (410)
T 1vyh_C 325 VSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387 (410)
T ss_dssp TTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEE
T ss_pred CCCCceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEE
Confidence 764433222222 12233456654 334445555667788887765555555544333334443
No 260
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.032 Score=58.56 Aligned_cols=152 Identities=7% Similarity=-0.068 Sum_probs=90.1
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
+..+++.+. +.++.. . ..+.|.+.++........+.........|++.|....|+.+. ... .|...++.....
T Consensus 209 ~~~~~~~~~-~~~~~~-~---~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~-~i~i~d~~~~~~ 281 (425)
T 1r5m_A 209 GVDVEWVDD-DKFVIP-G---PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS-DDG-TLRIWHGGNGNS 281 (425)
T ss_dssp BSCCEEEET-TEEEEE-C---GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE-TTS-CEEEECSSSBSC
T ss_pred eeEEEEcCC-CEEEEE-c---CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc-CCC-EEEEEECCCCcc
Confidence 566777654 444444 3 467888988876544333433345678899998665555544 323 678777765544
Q ss_pred EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEE
Q psy6570 108 FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKI 186 (713)
Q Consensus 108 ~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~ 186 (713)
...+.........|++++.. ++++-...+.|...++............ ......+++. .+.++++....+.|..+
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccC--CccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 44444344567889999765 5555556678988888654433333221 2234455554 33444554556677777
Q ss_pred cccC
Q psy6570 187 NKFG 190 (713)
Q Consensus 187 ~~~~ 190 (713)
+...
T Consensus 358 ~~~~ 361 (425)
T 1r5m_A 358 DLKK 361 (425)
T ss_dssp ECHH
T ss_pred ECCC
Confidence 6543
No 261
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.097 Score=55.92 Aligned_cols=165 Identities=11% Similarity=-0.009 Sum_probs=95.1
Q ss_pred CCceeEEEccCccc------EEecCCCCCceEEEecc---CCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcc
Q psy6570 6 SGNVTRVKREMNLK------TVLSNLHDPRGVAVDWV---GKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPY 75 (713)
Q Consensus 6 ~~~I~~~~~~~~~~------~~~~~~~~p~gla~D~~---~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~ 75 (713)
.+.|+.+++..... .+......+..|++.+. +..|+.+. ..+.|.+.++.... ...+.......+.
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~----~d~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD----RDEHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE----TTSCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc----CCCcEEEEECCCCceeeeeecCCCCceE
Confidence 45566666543221 12223345678889876 44454444 46788888876443 4343323345678
Q ss_pred eEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeC-------------------------CCCCCeeEEEeCCCCeE
Q psy6570 76 DIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDN-------------------------NIQWPTGITIDYPSQRL 130 (713)
Q Consensus 76 ~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-------------------------~~~~p~glavd~~~~~L 130 (713)
.|++. ++.++++-.... .|...++........+.. .-.....|++.+.+..|
T Consensus 246 ~~~~s--d~~~l~s~~~d~-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 246 SICCG--KDYLLLSAGGDD-KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEC--STTEEEEEESSS-EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEEEC--CCCEEEEEeCCC-eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 89998 454444443434 788888765443333321 11235688999888889
Q ss_pred EEEcCCCCcEEEEeC--C-CCceeEEEecCCCCccceeeeeeCCeEEEEeC
Q psy6570 131 YWADPKARTIESINL--N-GKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178 (713)
Q Consensus 131 Y~~d~~~~~I~~~~~--~-g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~ 178 (713)
|++....+.|..+++ . +.....+..... ...+..+++..+.++++-.
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~-~~~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITF-PYNVISLSAHNDEFQVTLD 372 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEEC-SSCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEecc-CCceEEEEecCCcEEEEEe
Confidence 888766777777777 2 222222222211 2456788887777777643
No 262
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.71 E-value=0.12 Score=58.91 Aligned_cols=183 Identities=11% Similarity=0.052 Sum_probs=107.2
Q ss_pred CceeEEEccCc-ccEEec--CCC-----CCceEEEeccCCeEEEeec-CCCCCCeEEEEecCCceEEEEEcCCCCCcceE
Q psy6570 7 GNVTRVKREMN-LKTVLS--NLH-----DPRGVAVDWVGKNLYWTDA-GGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDI 77 (713)
Q Consensus 7 ~~I~~~~~~~~-~~~~~~--~~~-----~p~gla~D~~~~~ly~td~-~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~i 77 (713)
..|++++..+. .++++. .+. ...++++.+.++.|.++-. +......|.+.++++.....+.... ....++
T Consensus 98 ~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~ 176 (710)
T 2xdw_A 98 RVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCM 176 (710)
T ss_dssp CEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCE
T ss_pred EEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceE
Confidence 35677765543 333322 111 2457888888887766543 1111128999999876654332222 225678
Q ss_pred EEcCCCCcEEEEccC-C-------------CCeEEEEecCCCCcE-EEEeCC---CCCCeeEEEeCCCCeEEEEcC-C--
Q psy6570 78 ALEPLSGRMFWTELG-I-------------KPRISGASIDGKNKF-NLVDNN---IQWPTGITIDYPSQRLYWADP-K-- 136 (713)
Q Consensus 78 avD~~~~~ly~td~~-~-------------~~~I~~~~~dG~~~~-~l~~~~---~~~p~glavd~~~~~LY~~d~-~-- 136 (713)
+..|.++.||++... . ..+|++.++.+.... +++... -....++++++++++|+++-. .
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 998877788887532 1 225888888754422 333222 223468999999998888753 2
Q ss_pred -CCcEEEEeCCC------C--ceeEEEecCCCCccceeeeeeCCeEEEEeCC---CCcEEEEcccCCC
Q psy6570 137 -ARTIESINLNG------K--DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR---TNNILKINKFGNS 192 (713)
Q Consensus 137 -~~~I~~~~~~g------~--~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~---~~~i~~~~~~~~~ 192 (713)
...|+.+++++ . ..+.+...... ....+..++++||+.... ..+|++++..++.
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEG--EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS--CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCc--EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 56899999875 3 24444432211 122355667888877543 3468888866543
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.69 E-value=0.044 Score=62.61 Aligned_cols=127 Identities=11% Similarity=0.031 Sum_probs=83.4
Q ss_pred cCCceeEEEccCcc-cEEecCCC----CCceEEEeccCCeEEEeecCCC-----CCCeEEEEecCCceEEEEEcCC--CC
Q psy6570 5 SSGNVTRVKREMNL-KTVLSNLH----DPRGVAVDWVGKNLYWTDAGGR-----SSNNIMVSTLEGRKKRTLLNTG--LN 72 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~~~~~~----~p~gla~D~~~~~ly~td~~~~-----~~~~I~~~~~~G~~~~~l~~~~--~~ 72 (713)
.++.|..+++.+.. +.++.... .+..+++.+.++.|.++..... ....|++.++++...+.+.... ..
T Consensus 35 ~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 114 (723)
T 1xfd_A 35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNA 114 (723)
T ss_dssp SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSC
T ss_pred CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccc
Confidence 45678888877644 33333222 3789999998887776643111 1267889998876654443222 12
Q ss_pred CcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCC------------------CCCeeEEEeCCCCeEEEEc
Q psy6570 73 EPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNI------------------QWPTGITIDYPSQRLYWAD 134 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~------------------~~p~glavd~~~~~LY~~d 134 (713)
.+..+++.|..++|.++.. . .|++.++++...+.+..... ....+++++|++++|+++.
T Consensus 115 ~~~~~~~SPdG~~la~~~~--~-~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE--N-NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET--T-EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccccEECCCCCEEEEEEC--C-eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 3678899988878877664 3 79999998876666654321 1236899999988888764
No 264
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.69 E-value=0.087 Score=54.80 Aligned_cols=186 Identities=10% Similarity=-0.026 Sum_probs=103.3
Q ss_pred cCCceeEEEccCccc------EEecCC------CCCceEEEe----ccCCe-EEEeecCCCCCCeEEEEecCC-------
Q psy6570 5 SSGNVTRVKREMNLK------TVLSNL------HDPRGVAVD----WVGKN-LYWTDAGGRSSNNIMVSTLEG------- 60 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~------~~~~~~------~~p~gla~D----~~~~~-ly~td~~~~~~~~I~~~~~~G------- 60 (713)
.++.|...++.+... ..+... ..+..|++. +.+.. |+.+.. .+.|.+.++..
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV----KGTTYIWKFHPFADESNS 164 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET----TSCEEEEEEESSSSHHHH
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC----CCcEEEEeCCcccccccc
Confidence 356677777665432 223333 567889998 77776 555543 57787777664
Q ss_pred ceEE-----EEE------cCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeC---C---CCCCeeEEE
Q psy6570 61 RKKR-----TLL------NTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDN---N---IQWPTGITI 123 (713)
Q Consensus 61 ~~~~-----~l~------~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~---~---~~~p~glav 123 (713)
+... .+. ......+..|++.|.. ++++..... .|...++........+.. . ......|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNG-TVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTS-EEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCC-cEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 2222 232 2224568899999855 444443333 788888875444444443 2 456789999
Q ss_pred eCCCCeEEEEcCC--CCcEEEEeCCCCceeEEEecCC-----------CCccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 124 DYPSQRLYWADPK--ARTIESINLNGKDRFVVYHTED-----------NGYKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 124 d~~~~~LY~~d~~--~~~I~~~~~~g~~~~~~~~~~~-----------~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
++....|+.+... .+.|...++........+.... .......+++. ++.++++....+.|..++..
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9877666665432 1678888875443322222100 11233455554 34445555566777777765
Q ss_pred CCCcceee
Q psy6570 190 GNSDFNVL 197 (713)
Q Consensus 190 ~~~~~~~~ 197 (713)
.+.....+
T Consensus 322 ~~~~~~~~ 329 (397)
T 1sq9_A 322 TKERITTL 329 (397)
T ss_dssp TTEEEEEE
T ss_pred CCceeEEE
Confidence 55444433
No 265
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=96.69 E-value=0.0016 Score=67.57 Aligned_cols=34 Identities=32% Similarity=1.093 Sum_probs=21.9
Q ss_pred eecCCCCccCCCCCCccccCCCCCCcccCCCCccCC-----------CCCCCCCCCCc
Q psy6570 471 KCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGK-----------KCDTCTCLNGG 517 (713)
Q Consensus 471 ~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~-----------~C~~~~C~~~g 517 (713)
+|.|..++.|..|+. |.+||.|. .|..+.|.+++
T Consensus 287 ~C~C~hnT~G~~CEr-------------C~pGy~g~p~~~at~~~~~~C~pC~Cnghs 331 (403)
T 2y38_A 287 QCACQHNTCGGSCDR-------------CCPGFNQQPWKPATTDSANECQSCNCHGHA 331 (403)
T ss_dssp EECCCTTEESSSCCE-------------ECTTCCSSCCCCCCSSCCCCCCCCCCTTSC
T ss_pred EeECcCcCcCCCCCC-------------CCccccCCcccccccCCCccccccccCCCC
Confidence 466677777777664 66677654 57777776544
No 266
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.69 E-value=0.0023 Score=51.45 Aligned_cols=73 Identities=25% Similarity=0.667 Sum_probs=56.4
Q ss_pred CCCCCCCCCCCcEEee-cCCCceeeCCCCCc--CCCCCcCCCCCC-C---CCCCCCCCeEecCCCCcceeecCCCcc---
Q psy6570 553 NKCTPNYCSNNGTCVL-IEGKPSCKCLPPYS--GKQCTEREDSPS-C---HNYCDNAGLCSYSKQGKPVCTCVNGWS--- 622 (713)
Q Consensus 553 ~~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~--G~~C~~~~~~~~-C---~~~C~~~g~C~~~~~g~~~C~C~~G~~--- 622 (713)
..|....|+.++.|.. .+|..+|.|..||. |..|... +. | ...|+.++.|....+..-.|.|+++|.
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~---Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~ 87 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA---SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPL 87 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC---CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEE
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC---CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccc
Confidence 3455556888999998 68889999999998 4567765 44 6 456999999988766778999999964
Q ss_pred --cCCCCc
Q psy6570 623 --GITCSE 628 (713)
Q Consensus 623 --G~~C~~ 628 (713)
|-.|..
T Consensus 88 ~~GvfC~~ 95 (105)
T 1n1i_A 88 FEGVFCSS 95 (105)
T ss_dssp GGGTEECC
T ss_pred cceEEECC
Confidence 555543
No 267
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.68 E-value=0.15 Score=59.08 Aligned_cols=184 Identities=8% Similarity=-0.076 Sum_probs=107.4
Q ss_pred CCceeEEEccCcccE--EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc-eEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKT--VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR-KKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~--~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~-~~~~l~~~~~~~p~~iavD~~ 82 (713)
++.|...+..+...+ +......+..|++.+.+..|+.+. ..+.|.+.+++.. .....+......+..+++.|.
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS----DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE----TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc----CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC
Confidence 566777776654322 233445578899988777776554 3678889888764 333333333456788999985
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCC-CCCCeeEEEeC--CCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNN-IQWPTGITIDY--PSQRLYWADPKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~-~~~p~glavd~--~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
++.++++-.... .|...+++.......+... ......+++.+ ....|+ +-...+.|...++........... .
T Consensus 152 ~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~--~ 227 (814)
T 3mkq_A 152 DPSTFASGCLDR-TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI-TASDDLTIKIWDYQTKSCVATLEG--H 227 (814)
T ss_dssp EEEEEEEEETTS-EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE-EECTTSEEEEEETTTTEEEEEEEC--C
T ss_pred CCCEEEEEeCCC-eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE-EEeCCCEEEEEECCCCcEEEEEcC--C
Confidence 565555554444 7888888655444433333 35677889987 444444 444567888888765443332222 1
Q ss_pred Cccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 160 GYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 160 ~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
......+++. .+.++++....+.|..++...+.....+
T Consensus 228 ~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 2233445544 3344555455667777776554443333
No 268
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.65 E-value=0.025 Score=64.69 Aligned_cols=164 Identities=9% Similarity=0.021 Sum_probs=89.7
Q ss_pred CceEEEeccCCeEEEeecCCC------------------------------CCCeEEEEecCCceE-EEEEcCC-----C
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGR------------------------------SSNNIMVSTLEGRKK-RTLLNTG-----L 71 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~------------------------------~~~~I~~~~~~G~~~-~~l~~~~-----~ 71 (713)
+.++++.+.++.|+++..... ....|.+.++++... +.+.... .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 367999988888877643110 012577777766543 3222110 1
Q ss_pred CCcceEEEcCCCCcEEEE-ccC-CCCeEEEEecCCCCcEEEEeC-CCCC----CeeEEEeCCCCeEEEE-cCCC------
Q psy6570 72 NEPYDIALEPLSGRMFWT-ELG-IKPRISGASIDGKNKFNLVDN-NIQW----PTGITIDYPSQRLYWA-DPKA------ 137 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~t-d~~-~~~~I~~~~~dG~~~~~l~~~-~~~~----p~glavd~~~~~LY~~-d~~~------ 137 (713)
.....+++.|..+.|+.. +.. ....|++.++++...+.++.. ...+ +..+++.+++++|+++ ....
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 223468888866555333 332 223688888877665555422 1111 2478999988888886 3333
Q ss_pred CcEEEEe-CCCCc---eeEEEecCCCCccceeeeeeCCeEEEEeCC----CCcEEEEcccCC
Q psy6570 138 RTIESIN-LNGKD---RFVVYHTEDNGYKPYKLEVFEDNLYFSTYR----TNNILKINKFGN 191 (713)
Q Consensus 138 ~~I~~~~-~~g~~---~~~~~~~~~~~~~p~~i~~~~~~ly~td~~----~~~i~~~~~~~~ 191 (713)
.+|+.++ .++.. .+.+............++.+++.||++... ...|++++..++
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 3688888 56554 333332111111112344457788776443 345777775543
No 269
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.64 E-value=0.18 Score=53.09 Aligned_cols=138 Identities=11% Similarity=0.099 Sum_probs=80.1
Q ss_pred cCCceeEEEccCcc-cEEec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNL-KTVLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...+..... ...+. .......|++++.+. ++++-. ..+.|.+.++.+......+.........|++.|.
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs---~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCS---ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 203 (410)
T ss_dssp SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEE---TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSS
T ss_pred CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEe---CCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC
Confidence 35666666766432 22222 234467889987654 444544 4677888888765443333233356778999985
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD 149 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~ 149 (713)
...| ++-.... .|...++........+.........+++++.+. ++++-...+.|...++....
T Consensus 204 ~~~l-~s~s~D~-~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 204 GDHI-VSASRDK-TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp SSEE-EEEETTS-EEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC
T ss_pred CCEE-EEEeCCC-eEEEEECCCCcEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCc
Confidence 5544 4443333 677777765444334444445567788886544 44454455677777765443
No 270
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.64 E-value=0.31 Score=49.67 Aligned_cols=164 Identities=10% Similarity=0.040 Sum_probs=92.1
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
...+++.+ .+.|+ +-. ..+.|.+.++........+.........|++.|. +.++++..... .|...++.....
T Consensus 146 v~~~~~~~-~~~l~-s~s---~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sg~~d~-~v~~wd~~~~~~ 218 (340)
T 1got_B 146 LSCCRFLD-DNQIV-TSS---GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDA-SAKLWDVREGMC 218 (340)
T ss_dssp EEEEEEEE-TTEEE-EEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTS-CEEEEETTTCSE
T ss_pred EEEEEECC-CCcEE-EEE---CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC-CCEEEEEeCCC-cEEEEECCCCee
Confidence 34455543 24443 333 4677888887655444334333456788999974 55555544433 677777765444
Q ss_pred EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEE
Q psy6570 108 FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKI 186 (713)
Q Consensus 108 ~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~ 186 (713)
...+.........|+++|....|+ +-...+.|...++....................+++. .+.++.+-...+.|...
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vw 297 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEcCCcCCEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEE
Confidence 444443445678999997665554 4445677888887654433222221111123445554 44555565666778777
Q ss_pred cccCCCcceeeec
Q psy6570 187 NKFGNSDFNVLAN 199 (713)
Q Consensus 187 ~~~~~~~~~~~~~ 199 (713)
+.........+..
T Consensus 298 d~~~~~~~~~~~~ 310 (340)
T 1got_B 298 DALKADRAGVLAG 310 (340)
T ss_dssp ETTTCCEEEEEEC
T ss_pred EcccCcEeeEeec
Confidence 7655544444433
No 271
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.63 E-value=0.13 Score=53.42 Aligned_cols=158 Identities=9% Similarity=0.027 Sum_probs=100.1
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC--CCCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT--GLNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~--~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
......|++.+.+..++++-. ..+.|.+.++++.....++.. .......|++.|.++.++++-.... .|...++
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~ 148 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGS---KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG-ATTLRDF 148 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEE---BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT-EEEEEET
T ss_pred CCCEEEEEECCCCCCEEEEEc---CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC-EEEEEEC
Confidence 345678889887634555544 467899999986555544432 2356778999885555555544434 7888888
Q ss_pred CCCCcEEEEeCC--CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeC
Q psy6570 103 DGKNKFNLVDNN--IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTY 178 (713)
Q Consensus 103 dG~~~~~l~~~~--~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~ 178 (713)
.+.....+.... ......|++.+....|+.+. ..+.|...++++.....+... ......+++. +.+++++..
T Consensus 149 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp TSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEE
T ss_pred CCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEe
Confidence 875544444322 24468899998776666554 557888999876655554432 2234556654 333666666
Q ss_pred CCCcEEEEcccC
Q psy6570 179 RTNNILKINKFG 190 (713)
Q Consensus 179 ~~~~i~~~~~~~ 190 (713)
..+.|..++...
T Consensus 225 ~d~~i~iwd~~~ 236 (383)
T 3ei3_B 225 VDATVKLWDLRN 236 (383)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCEEEEEeCCC
Confidence 677777777654
No 272
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.082 Score=56.54 Aligned_cols=136 Identities=7% Similarity=-0.028 Sum_probs=81.1
Q ss_pred CCceeEEEcc--Ccc--cEEe--cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEE----EEcCCCCCcc
Q psy6570 6 SGNVTRVKRE--MNL--KTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRT----LLNTGLNEPY 75 (713)
Q Consensus 6 ~~~I~~~~~~--~~~--~~~~--~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~----l~~~~~~~p~ 75 (713)
++.|...++. +.. .++. .....+.+|++.+.+..|+.++. .+.|.+.++....... .+......+.
T Consensus 124 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~ 199 (450)
T 2vdu_B 124 DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK----FGDVYSIDINSIPEEKFTQEPILGHVSMLT 199 (450)
T ss_dssp GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC----CCcEEEEecCCcccccccceeeecccCceE
Confidence 4666666665 322 2221 22355788999988777877764 6778888875433211 1111235678
Q ss_pred eEEEcCC---CCcEEEEccCCCCeEEEEecCCCCc-EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc
Q psy6570 76 DIALEPL---SGRMFWTELGIKPRISGASIDGKNK-FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD 149 (713)
Q Consensus 76 ~iavD~~---~~~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~ 149 (713)
.|++.|. ..+|+.++.. . .|...++..... ..++.........|+++ ...+|+.+. ..+.|...++....
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d-~-~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRD-E-HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGK 273 (450)
T ss_dssp EEEEEECTTSCEEEEEEETT-S-CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTTCC
T ss_pred EEEEcCCCCCCcEEEEEcCC-C-cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCc
Confidence 8999986 4445544433 3 677777764433 33333344567889998 555665554 56788888876543
No 273
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.58 E-value=0.13 Score=53.57 Aligned_cols=120 Identities=12% Similarity=0.086 Sum_probs=75.8
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC---C---CCCcceEEEcCCCCcEEEEccCC-CCeE
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT---G---LNEPYDIALEPLSGRMFWTELGI-KPRI 97 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~---~---~~~p~~iavD~~~~~ly~td~~~-~~~I 97 (713)
...+..|++.+.+ ++++-. ..+.|.+.++........+.. . ...+..|+++|....|+...... .+.|
T Consensus 186 ~~~i~~~~~~~~~--~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i 260 (397)
T 1sq9_A 186 SQFATSVDISERG--LIATGF---NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 260 (397)
T ss_dssp CCCCCEEEECTTS--EEEEEC---TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE
T ss_pred CCCceEEEECCCc--eEEEEe---CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceE
Confidence 4557889998876 444444 578899999875444333333 2 46688999998655555544321 0378
Q ss_pred EEEecCCCCcEEEEeC-------------CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce
Q psy6570 98 SGASIDGKNKFNLVDN-------------NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR 150 (713)
Q Consensus 98 ~~~~~dG~~~~~l~~~-------------~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~ 150 (713)
...++........+.. .......|++++...+|+.+. ..+.|...++.....
T Consensus 261 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 261 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTKER 325 (397)
T ss_dssp EEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEE
T ss_pred EEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCce
Confidence 8888765544444433 344568899998766665554 567888888865433
No 274
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.58 E-value=0.0015 Score=56.11 Aligned_cols=57 Identities=30% Similarity=0.689 Sum_probs=37.0
Q ss_pred CCCCCcEeccCC--CCc-cccCCCCCcCCCCccCCCCCCCCCCeeecC-CCCCeecCCCCccCCCCC
Q psy6570 422 KCQNGGVCVNKT--TGL-ECDCPKFYYGKNCQYSQCKNYCVNGECSIT-DSGPKCMCSPGYSGKKCD 484 (713)
Q Consensus 422 ~C~~~~~C~~~~--~~~-~C~C~~G~~g~~C~~~~C~~~~~~~~C~~~-~~~~~C~C~~G~~g~~C~ 484 (713)
||.++|+|++.. .+| .|.|++||.|..|+++... .|... ...|++.+..+++|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~------~C~~g~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK------TCYEGNGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSC------CSBCSSCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcC------CCcccccccceeeccccccCCccc
Confidence 688888887764 445 8888888888888854321 13222 224677777777776665
No 275
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.56 E-value=0.081 Score=56.30 Aligned_cols=182 Identities=11% Similarity=0.071 Sum_probs=103.9
Q ss_pred cCCceeEEEccCcc-cEEec---CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC--CCCcceEE
Q psy6570 5 SSGNVTRVKREMNL-KTVLS---NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG--LNEPYDIA 78 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~~~---~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~--~~~p~~ia 78 (713)
.++.|...++.... ..++. .-....+|+|.+.++.++++-. ..+.|.+.++.+...+.+.... ......|+
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS---MEGTTRLQDFKGNILRVFASSDTINIWFCSLD 216 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC---SSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe---CCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence 35666666665433 22222 2344788999876666666665 5788999999987766655432 22356789
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEEecC
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVYHTE 157 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~ 157 (713)
+++.. .++++-.... .|...++++.....+. ........|++++....++++-...+.|...++.... ...+....
T Consensus 217 ~~~~~-~~l~~g~~dg-~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~ 293 (435)
T 4e54_B 217 VSASS-RMVVTGDNVG-NVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSL 293 (435)
T ss_dssp EETTT-TEEEEECSSS-BEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCC
T ss_pred ECCCC-CEEEEEeCCC-cEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEee
Confidence 98754 4444443333 7888888876543332 2234567899998877777766555666666654322 11111110
Q ss_pred CCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCC
Q psy6570 158 DNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNS 192 (713)
Q Consensus 158 ~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~ 192 (713)
........|++. .+.++++....+.|..++...+.
T Consensus 294 ~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 294 PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred eccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 001112344443 33444554556677777655443
No 276
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.54 E-value=0.027 Score=67.69 Aligned_cols=155 Identities=7% Similarity=-0.015 Sum_probs=95.4
Q ss_pred CCceEEEe-ccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCC-CcceEEEcCCCCcEEEEccCCCCeEE-EEecC
Q psy6570 27 DPRGVAVD-WVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN-EPYDIALEPLSGRMFWTELGIKPRIS-GASID 103 (713)
Q Consensus 27 ~p~gla~D-~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~-~p~~iavD~~~~~ly~td~~~~~~I~-~~~~d 103 (713)
.+..+++. +.+..|+++.. ..|.+.++++.....+. .... .+..+++. ..+.|++... .. +|+ ..+++
T Consensus 297 ~v~~~~~S~pdG~~la~~~~-----~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~s-dg~~l~~~s~-~~-~l~~~~d~~ 367 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSR-----GQAFIQDVSGTYVLKVP-EPLRIRYVRRGGD-TKVAFIHGTR-EG-DFLGIYDYR 367 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEET-----TEEEEECTTSSBEEECS-CCSCEEEEEECSS-SEEEEEEEET-TE-EEEEEEETT
T ss_pred ccceeeecCCCCCEEEEEEc-----CEEEEEcCCCCceEEcc-CCCcceEEeeeEc-CCCeEEEEEC-CC-ceEEEEECC
Confidence 36788888 88777776653 57888888766544432 2222 45566666 4445665543 33 788 88888
Q ss_pred CCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC----
Q psy6570 104 GKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR---- 179 (713)
Q Consensus 104 G~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~---- 179 (713)
+...+.+. .....+..+++++++++|+++.. .+.|+.+++++.....+............+..++.+|.++...
T Consensus 368 ~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 368 TGKAEKFE-ENLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp TCCEEECC-CCCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSST
T ss_pred CCCceEec-CCccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccc
Confidence 77665554 34456789999998888887764 4589999997766555543321111223333345567666432
Q ss_pred -----CCcEEEEcccCCC
Q psy6570 180 -----TNNILKINKFGNS 192 (713)
Q Consensus 180 -----~~~i~~~~~~~~~ 192 (713)
...|+.++..++.
T Consensus 446 ~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE
T ss_pred ccCCCCCeEEEEECCCCc
Confidence 2467777665443
No 277
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.51 E-value=0.00092 Score=48.25 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=24.8
Q ss_pred CCCCCC--CCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 221 NHCDDK--PCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 221 ~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
|||... +| .+.|+|++|+|+|.|++||..
T Consensus 2 dEC~~~~~~C--~~~C~nt~Gsy~C~C~~Gy~L 32 (55)
T 2jkh_L 2 KLCSLDNGDC--DQFCHEEQNSVVCSCARGYTL 32 (55)
T ss_dssp CCTTTGGGGC--SSEEEEETTEEEEECCTTEEE
T ss_pred ccccCCCCCc--CcEeEcCCCCeEEeCCCCCEE
Confidence 678754 57 689999999999999999983
No 278
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.50 E-value=0.29 Score=51.28 Aligned_cols=110 Identities=11% Similarity=0.004 Sum_probs=69.1
Q ss_pred EEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE
Q psy6570 32 AVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLV 111 (713)
Q Consensus 32 a~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~ 111 (713)
++.+.++.| ++-. ..+.|.+.++.......++.........|++.|...+|+... ... .|...+++.......+
T Consensus 104 ~~~~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~d~-~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 104 TAKLQMRRF-ILGT---TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS-QDM-QLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EECSSSCEE-EEEE---TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE-TTS-EEEEEETTTCCCCEEE
T ss_pred EEecCCCEE-EEEE---CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe-CCC-eEEEEeCCCCcCceEE
Confidence 334444444 4444 467899999887665555444446788999998655554443 333 7888888654444444
Q ss_pred eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 112 DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 112 ~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
.........|++++...+|+.+. ..+.|...++...
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSAS-LDGTIRLWECGTG 213 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTT
T ss_pred cCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEeECCCC
Confidence 44555678999998776666554 4566777777543
No 279
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.46 E-value=0.44 Score=49.67 Aligned_cols=186 Identities=11% Similarity=0.035 Sum_probs=98.3
Q ss_pred CCceeEEEccCcccE-Eec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKT-VLS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~-~~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++.....+ .+. .......|++.+.+..|+ +-. ..+.|.+.++........+.. ...+..+++.|.+
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s---~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~ 218 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGS---GDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGD 218 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEE---TTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSTT
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-Eec---CCCcEEEEECCCCeeEEEEEc-CCCcEEEEEECCC
Confidence 455666666543322 122 233467788887766665 444 467888889876544333322 2457789998867
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEe-------CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCcee-----
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVD-------NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRF----- 151 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~-------~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~----- 151 (713)
+.++++..... .|...++........+. ........|++++.+..|+.+ ...+.|...++......
T Consensus 219 ~~~l~~~s~d~-~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 219 GKYIAAGSLDR-AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp CCEEEEEETTS-CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC-----------
T ss_pred CCEEEEEcCCC-cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCCCCCcccccC
Confidence 77666654434 67777766443322221 122346789999776666544 44566777666432110
Q ss_pred -----EEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 152 -----VVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 152 -----~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
..............+++. ++.++++-...+.|...+...+.....+.
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 000000001122344443 33444455556677777765555444443
No 280
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.27 Score=50.42 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=95.3
Q ss_pred CCceeEEEccCcc--cE-Ee-cCCCCCceEEEecc--CCeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcceE
Q psy6570 6 SGNVTRVKREMNL--KT-VL-SNLHDPRGVAVDWV--GKNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYDI 77 (713)
Q Consensus 6 ~~~I~~~~~~~~~--~~-~~-~~~~~p~gla~D~~--~~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~i 77 (713)
++.|...++.... .+ .. .....+..|++.+. +..|+.+. ..+.|.+.++.... ....+.........|
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~----~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS----SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE----TTSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec----CCCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 4666666666542 11 12 23445678888877 55555554 46788888887652 223333334567889
Q ss_pred EEcCC------------CCcEEEEccCCCCeEEEEecCCCCcE-EEE---eCCCCCCeeEEEeCCC--CeEEEEcCCCCc
Q psy6570 78 ALEPL------------SGRMFWTELGIKPRISGASIDGKNKF-NLV---DNNIQWPTGITIDYPS--QRLYWADPKART 139 (713)
Q Consensus 78 avD~~------------~~~ly~td~~~~~~I~~~~~dG~~~~-~l~---~~~~~~p~glavd~~~--~~LY~~d~~~~~ 139 (713)
++.|. ++.++++-.... .|...++...... .++ .........|++++.. +.++++-...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 99884 355555543333 5666666543322 222 2234456789999873 444445445566
Q ss_pred EEEEeCCCCc---eeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEccc
Q psy6570 140 IESINLNGKD---RFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 140 I~~~~~~g~~---~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~ 189 (713)
|...++.... ...+............+++. +..|+.+. ..+.|..++..
T Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~ 286 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKEN 286 (379)
T ss_dssp EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE-SSSSEEEEEEE
T ss_pred EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec-CCCcEEEEeCC
Confidence 7777765542 22222221112223445553 34454443 35666666544
No 281
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.43 E-value=0.2 Score=51.93 Aligned_cols=119 Identities=6% Similarity=0.001 Sum_probs=77.0
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCC--cEEEEccCCCCeEEEEec
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSG--RMFWTELGIKPRISGASI 102 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~--~ly~td~~~~~~I~~~~~ 102 (713)
...+..|++.+.++.++++-. ..+.|.+.+++.......+.. ......+++.+... .++++..... .|...++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~ 173 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSS---FDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDL 173 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEE---TTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEEEESSS-SEEEEES
T ss_pred CCcEEEEEEccCCCcEEEEEe---CCCeEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEEEcCCC-eEEEEeC
Confidence 345677888875555555555 578899999887665544432 24566777776533 2444433333 6888888
Q ss_pred CCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 103 DGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 103 dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
........+.........|++++...+|+++-...+.|...++...
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 7555444444445567889999888877766666778888887543
No 282
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.42 E-value=0.33 Score=49.63 Aligned_cols=157 Identities=9% Similarity=0.007 Sum_probs=88.9
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
-.....|++.+.++.|+.+. ..+.|.+.++++.. ....+......+..|++.|...+|+..... . .|...++
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~----~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g-~i~vwd~ 81 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-R-NAYVWTL 81 (372)
T ss_dssp SSCCCEEEECTTSSEEEEEC----SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-S-CEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-C-eEEEEEC
Confidence 34568899998766665553 36789999887764 222232334567899999865555554432 3 5666666
Q ss_pred CCCCcEEEE--eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCcee-EEEec-CCCCccceeeeee-CCeEEEEe
Q psy6570 103 DGKNKFNLV--DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRF-VVYHT-EDNGYKPYKLEVF-EDNLYFST 177 (713)
Q Consensus 103 dG~~~~~l~--~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~-~~~~~-~~~~~~p~~i~~~-~~~ly~td 177 (713)
+.......+ .........|++++...+|+.+. ..+.|...+++..... .+... .........+++. ++.++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 544322222 22334578899998777777665 3456666665544321 11111 1112234556654 33445554
Q ss_pred CCCCcEEEEcc
Q psy6570 178 YRTNNILKINK 188 (713)
Q Consensus 178 ~~~~~i~~~~~ 188 (713)
...+.|..++.
T Consensus 161 ~~dg~i~~~d~ 171 (372)
T 1k8k_C 161 SCDFKCRIFSA 171 (372)
T ss_dssp ETTSCEEEEEC
T ss_pred cCCCCEEEEEc
Confidence 55566766663
No 283
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.41 E-value=0.031 Score=57.23 Aligned_cols=122 Identities=10% Similarity=0.090 Sum_probs=79.7
Q ss_pred CCCCCceEEEeccCCeEEEeecC-----CCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCC---CC
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAG-----GRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGI---KP 95 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~-----~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~---~~ 95 (713)
.+..+..+++ .+++|+++-.. ......|++.++++...+.+ .....+++.|..++|+++.... ..
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 3444566677 45667665320 00245788999888765555 3467789998887887765422 23
Q ss_pred eEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC--------------------------CCcEEEEeCCCCc
Q psy6570 96 RISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK--------------------------ARTIESINLNGKD 149 (713)
Q Consensus 96 ~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~--------------------------~~~I~~~~~~g~~ 149 (713)
.|++.++++...+.+..... ...+++.+++++|+++... ..+|+.+++++..
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 69999998766555554332 6889999888888887421 3568889987765
Q ss_pred e-eEEE
Q psy6570 150 R-FVVY 154 (713)
Q Consensus 150 ~-~~~~ 154 (713)
. +.+.
T Consensus 164 ~~~~l~ 169 (347)
T 2gop_A 164 VIEEFE 169 (347)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 5 4443
No 284
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.39 E-value=0.003 Score=54.11 Aligned_cols=60 Identities=25% Similarity=0.402 Sum_probs=42.6
Q ss_pred CCCCCCeEecCC-CCcc-eeecCCCcccCCCCcCCCCCCCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCc
Q psy6570 598 YCDNAGLCSYSK-QGKP-VCTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670 (713)
Q Consensus 598 ~C~~~g~C~~~~-~g~~-~C~C~~G~~G~~C~~~~~C~~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~ 670 (713)
+|.|+|+|++.. ..++ .|.|++||+|..|+.... . .|.. .....|++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~--~------~C~~-----g~G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS--K------TCYE-----GNGHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS--C------CSBC-----SSCTTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc--C------CCcc-----cccccceeeccccccCCcccC
Confidence 588889998763 1344 899999999999986321 1 2332 123348999999999999975
No 285
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.22 Score=49.49 Aligned_cols=174 Identities=7% Similarity=-0.008 Sum_probs=94.9
Q ss_pred CCceeEEEccCcccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCc
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGR 85 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ 85 (713)
++.|...+.......+......+..+++.+..+.++++-. ..+.|.+.+. ++....+.......+..|++.+.. .
T Consensus 123 d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~i~i~d~-~~~~~~~~~~~~~~i~~~~~~~~~-~ 197 (313)
T 3odt_A 123 DKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTAS---ADKTIKLWQN-DKVIKTFSGIHNDVVRHLAVVDDG-H 197 (313)
T ss_dssp TSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEE---TTSCEEEEET-TEEEEEECSSCSSCEEEEEEEETT-E
T ss_pred CCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEE---CCCCEEEEec-CceEEEEeccCcccEEEEEEcCCC-e
Confidence 4445555522222222333444566777663444444444 4678888883 333333332234567789998754 4
Q ss_pred EEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcccee
Q psy6570 86 MFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYK 165 (713)
Q Consensus 86 ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~ 165 (713)
|+... ... .|...++........+.........|++++.+ +|+ +-...+.|...++............ ......
T Consensus 198 ~~~~~-~dg-~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~~dg~v~iwd~~~~~~~~~~~~~--~~~i~~ 271 (313)
T 3odt_A 198 FISCS-NDG-LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-SCGEDRTVRIWSKENGSLKQVITLP--AISIWS 271 (313)
T ss_dssp EEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-EEETTSEEEEECTTTCCEEEEEECS--SSCEEE
T ss_pred EEEcc-CCC-eEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-EEecCCEEEEEECCCCceeEEEecc--CceEEE
Confidence 44333 333 78888887555444444455567899999765 554 4445678888887554433333221 223345
Q ss_pred eeee-CCeEEEEeCCCCcEEEEcccCC
Q psy6570 166 LEVF-EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 166 i~~~-~~~ly~td~~~~~i~~~~~~~~ 191 (713)
+++. ++. +++-...+.|..++...+
T Consensus 272 ~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 272 VDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 5554 334 344445666776665433
No 286
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.32 E-value=0.19 Score=57.09 Aligned_cols=178 Identities=14% Similarity=0.105 Sum_probs=99.6
Q ss_pred CceeEEEccCcc---cEEecCCC-C---CceEEEeccCCeEEEeecCCCCCCeEEEEecCCc--eEEEEEcCCCCCcceE
Q psy6570 7 GNVTRVKREMNL---KTVLSNLH-D---PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR--KKRTLLNTGLNEPYDI 77 (713)
Q Consensus 7 ~~I~~~~~~~~~---~~~~~~~~-~---p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~--~~~~l~~~~~~~p~~i 77 (713)
.+|++.++.+.. +++...-. . -.++++.+.++.|+++.........|++.++++. ..+.|... ...-...
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~-~~~~~~~ 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD-LDADVSL 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-SSSCEEE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-CCceEEE
Confidence 457787777643 23333322 2 2467888888888776542223358999998654 33444422 1222222
Q ss_pred EEcCCCCcEEEEccC--CCCeEEEEecCCCCc---EEEEeCCCCCCeeEEEeCCCCeEEEEcCC--CCcEEEEeCCCCce
Q psy6570 78 ALEPLSGRMFWTELG--IKPRISGASIDGKNK---FNLVDNNIQWPTGITIDYPSQRLYWADPK--ARTIESINLNGKDR 150 (713)
Q Consensus 78 avD~~~~~ly~td~~--~~~~I~~~~~dG~~~---~~l~~~~~~~p~glavd~~~~~LY~~d~~--~~~I~~~~~~g~~~ 150 (713)
+++.++.||+.... .+.+|+++++++... +.|+...-... .+++.+++|+++... ..+|+.++++|...
T Consensus 287 -~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~ 362 (693)
T 3iuj_A 287 -VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRV 362 (693)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCee
Confidence 55557777775432 245899999987665 55654332222 555558888887543 34799999998765
Q ss_pred eEEEecCCCCccceeee--eeCCeEEEEeC---CCCcEEEEcccCC
Q psy6570 151 FVVYHTEDNGYKPYKLE--VFEDNLYFSTY---RTNNILKINKFGN 191 (713)
Q Consensus 151 ~~~~~~~~~~~~p~~i~--~~~~~ly~td~---~~~~i~~~~~~~~ 191 (713)
+.+..... ..-.++. .+++.|+++-. ....|+.++..++
T Consensus 363 ~~l~~p~~--~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 363 REVALPGL--GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEECCSSS--SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEeecCCC--ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 55432211 1112222 23455655422 2356777776544
No 287
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.32 E-value=0.34 Score=50.70 Aligned_cols=178 Identities=11% Similarity=0.099 Sum_probs=97.9
Q ss_pred CCceeEEEccCcccEEe--cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc-eEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKTVL--SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR-KKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~--~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~-~~~~l~~~~~~~p~~iavD~~ 82 (713)
++.|...++.+...... .....+..|++.+.+..|+.+ . ..+.|.+.++... ....+ .........|++.|.
T Consensus 118 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s---~d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS-S---QDMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDR 192 (420)
T ss_dssp TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE-E---TTSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETT
T ss_pred CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEE-e---CCCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCC
Confidence 45666666654432221 234456789998876655544 4 4678999998643 34444 333466889999986
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCC------------------------CCCCeeEEEeCCCCeEEEEcCCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNN------------------------IQWPTGITIDYPSQRLYWADPKAR 138 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~------------------------~~~p~glavd~~~~~LY~~d~~~~ 138 (713)
..+|+..... . .|...++........+... ......+++++....|+. -...+
T Consensus 193 ~~~l~s~~~d-~-~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg 269 (420)
T 3vl1_A 193 GRNVLSASLD-G-TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA-GHVSG 269 (420)
T ss_dssp TTEEEEEETT-S-CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE-EETTS
T ss_pred CCEEEEEcCC-C-cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE-EcCCC
Confidence 5555544432 3 5666666543332222210 123345566655545544 44566
Q ss_pred cEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCC
Q psy6570 139 TIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNS 192 (713)
Q Consensus 139 ~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~ 192 (713)
.|...++............ .......+++. +..++++-...+.|..++...+.
T Consensus 270 ~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQLPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp CEEEEETTTCCEEEEECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred eEEEEECCCCceeEEcccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 7888887654433222211 12234555554 33256665666778888776543
No 288
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.26 E-value=0.29 Score=55.76 Aligned_cols=180 Identities=8% Similarity=-0.029 Sum_probs=103.6
Q ss_pred ceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCC------------CCCeEEEEecCCceE--EEEEcCC-
Q psy6570 8 NVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGR------------SSNNIMVSTLEGRKK--RTLLNTG- 70 (713)
Q Consensus 8 ~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~------------~~~~I~~~~~~G~~~--~~l~~~~- 70 (713)
.|+.+++.+...+. ... ....++++.+.++.||++..... ...+|++.++.+... +.+....
T Consensus 152 ~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD 230 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC
Confidence 67777777644221 222 22567888888888888754210 134599989876442 2333322
Q ss_pred -CCCcceEEEcCCCCcEEEEccCC---CCeEEEEecCC------C--CcEEEEeCCCCCCeeEEEeCCCCeEEEEcC---
Q psy6570 71 -LNEPYDIALEPLSGRMFWTELGI---KPRISGASIDG------K--NKFNLVDNNIQWPTGITIDYPSQRLYWADP--- 135 (713)
Q Consensus 71 -~~~p~~iavD~~~~~ly~td~~~---~~~I~~~~~dG------~--~~~~l~~~~~~~p~glavd~~~~~LY~~d~--- 135 (713)
-....++++.|..++|+++.... ...|+..++++ . ..+.|.. .... ..-.+++.+++||+...
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID-NFEG-EYDYVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSS-CEEEEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC-CCCc-EEEEEeccCCEEEEEECCCC
Confidence 12345889998888888775421 34899999875 2 2444443 2221 22346667888888753
Q ss_pred CCCcEEEEeCCCCc---eeEEEecCCCCccceeeeee-CCeEEEEeCCCC--cEEEEcccCC
Q psy6570 136 KARTIESINLNGKD---RFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTN--NILKINKFGN 191 (713)
Q Consensus 136 ~~~~I~~~~~~g~~---~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~--~i~~~~~~~~ 191 (713)
...+|+++++++.. .+.+..... .....++++. +++|+++....+ +|++++...+
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g 369 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG 369 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC
T ss_pred CCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC
Confidence 24579999998754 244443311 1123455665 677777654333 4666665333
No 289
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.25 E-value=0.17 Score=56.03 Aligned_cols=159 Identities=9% Similarity=-0.058 Sum_probs=90.6
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCC---CcceEEEcCC-CCcEEEEccCCCCeEEEEe
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN---EPYDIALEPL-SGRMFWTELGIKPRISGAS 101 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~---~p~~iavD~~-~~~ly~td~~~~~~I~~~~ 101 (713)
..+..+++.+.+..++++-. ..+.|.+.++........+..... ....|++.|. ..+|+... ... .|...+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~---~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg-~i~vwd 235 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVG---DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG-SDR-KISCFD 235 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEE---TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE-TTC-CEEEEE
T ss_pred ccEEEEEECCCCCcEEEEEe---CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe-CCC-eEEEEE
Confidence 34677888877664555555 578899999876554444433334 5788999987 44444444 333 688888
Q ss_pred cCCCCcEEEE-e---CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC-CC-CccceeeeeeCCeEEE
Q psy6570 102 IDGKNKFNLV-D---NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE-DN-GYKPYKLEVFEDNLYF 175 (713)
Q Consensus 102 ~dG~~~~~l~-~---~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~-~~-~~~p~~i~~~~~~ly~ 175 (713)
+........+ . ........|++. ....|+.+ ...+.|...++............ .. ......+.+..+.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV-GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp TTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE-ETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred CCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE-cCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 7654443333 2 334456788998 44455444 45577888887643332222221 10 1223344443444444
Q ss_pred EeCCCCcEEEEcccCC
Q psy6570 176 STYRTNNILKINKFGN 191 (713)
Q Consensus 176 td~~~~~i~~~~~~~~ 191 (713)
+-...+.|..++...+
T Consensus 314 ~~~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 314 SLSLDGTLNFYELGHD 329 (615)
T ss_dssp EEETTSCEEEEETTEE
T ss_pred EEECCCCEEEEECCCC
Confidence 4455667777765543
No 290
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.24 E-value=0.21 Score=51.77 Aligned_cols=139 Identities=8% Similarity=0.001 Sum_probs=79.7
Q ss_pred CCceeEEEccCcccEE-ecCCCCCceEEEeccCC--eEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 6 SGNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGK--NLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~--~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
++.|...++.....+. ......+..+++.+... .++++-. ..+.|.+.++........+.........|++.|.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT---RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE---SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc---CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 4556666665533222 33334456677766432 2444444 4678888888754433334333456789999987
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCc-EEEE---------------eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNK-FNLV---------------DNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~-~~l~---------------~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
...|+++-.... .|...++..... ...+ .........|++++....|+.+. ..+.|...++.
T Consensus 198 ~~~ll~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~ 275 (408)
T 4a11_B 198 YDYILATASADS-RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSS 275 (408)
T ss_dssp CTTEEEEEETTS-CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETT
T ss_pred CCcEEEEEcCCC-cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECC
Confidence 776666554433 677777654321 1111 11233467899998766666554 45678888876
Q ss_pred CCc
Q psy6570 147 GKD 149 (713)
Q Consensus 147 g~~ 149 (713)
...
T Consensus 276 ~~~ 278 (408)
T 4a11_B 276 NGE 278 (408)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
No 291
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.24 E-value=0.16 Score=52.43 Aligned_cols=135 Identities=10% Similarity=-0.064 Sum_probs=73.1
Q ss_pred cCCceeEEEccCcc-cEE--e-cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce---EEEEEcCCCCCcceE
Q psy6570 5 SSGNVTRVKREMNL-KTV--L-SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK---KRTLLNTGLNEPYDI 77 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~--~-~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~---~~~l~~~~~~~p~~i 77 (713)
.++.|...++.+.. +.+ + ........|++.+.++.|+... ..+.|.+.+++... ....+.........|
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS----QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE----TTSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe----CCCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 45677777776542 111 2 2233467888988766665544 35778888876544 222222333567789
Q ss_pred EEcCCCCcEEEEccCCCCeEEEEecCCCCc---EEEEeC-CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 78 ALEPLSGRMFWTELGIKPRISGASIDGKNK---FNLVDN-NIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 78 avD~~~~~ly~td~~~~~~I~~~~~dG~~~---~~l~~~-~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
++.|....|+..... . .|...+++.... ...+.. .......|++++.+.+|+.+. ..+.|...++.
T Consensus 107 ~~~~~~~~l~~~~~d-~-~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA-R-VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp ECCTTSSCCEEEESS-S-CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEEC
T ss_pred EECCCCCEEEEEecC-C-eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEE
Confidence 999866666655533 2 576666665431 223333 445678999998766666554 34566666653
No 292
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.22 E-value=0.11 Score=52.99 Aligned_cols=180 Identities=6% Similarity=0.006 Sum_probs=95.6
Q ss_pred CCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEE---cCCCCCcceEEEc
Q psy6570 6 SGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLL---NTGLNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~---~~~~~~p~~iavD 80 (713)
++.|...++..... .+......+..|++.+.++.++++-. ..+.|.+.++........+ ......+..|+++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS---KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE---TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe---CCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 45666666654332 22224455788888874455555554 4678999998765544444 2334668899999
Q ss_pred CCCCcEEEEccCCCCeEEEEecCCCCcEE----------------------------EEeCCCCCCeeEEEeCCCCeEEE
Q psy6570 81 PLSGRMFWTELGIKPRISGASIDGKNKFN----------------------------LVDNNIQWPTGITIDYPSQRLYW 132 (713)
Q Consensus 81 ~~~~~ly~td~~~~~~I~~~~~dG~~~~~----------------------------l~~~~~~~p~glavd~~~~~LY~ 132 (713)
|....|+.+... . .|...++....... ...........|+++ .+ +++
T Consensus 171 ~~~~~l~~~~~d-g-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~ 245 (366)
T 3k26_A 171 LLGEKIMSCGMD-H-SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LIL 245 (366)
T ss_dssp TTSSEEEEEETT-S-CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEE
T ss_pred CCCCEEEEecCC-C-CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEE
Confidence 865555555432 3 57776665321110 000123345677777 34 444
Q ss_pred EcCCCCcEEEEeCCCCce------------eEEEecCCCCccceeee--ee-CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 133 ADPKARTIESINLNGKDR------------FVVYHTEDNGYKPYKLE--VF-EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 133 ~d~~~~~I~~~~~~g~~~------------~~~~~~~~~~~~p~~i~--~~-~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
+-...+.|...++..... ..+............++ .+ ++.++++-...+.|..++...+..
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 444567777777644322 22221111111222333 33 144555555667788887765543
No 293
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.21 E-value=0.0057 Score=48.90 Aligned_cols=73 Identities=21% Similarity=0.505 Sum_probs=50.7
Q ss_pred CCCCCCCeEecCCCCcceeecCCCccc--CCCCcC--CCCC---CCCCCCCeecCCCCccCCCCCceeeCCCCc-----c
Q psy6570 597 NYCDNAGLCSYSKQGKPVCTCVNGWSG--ITCSER--VSCA---HFCFNGGTCREQNYSLDPDLKPICICPRGY-----A 664 (713)
Q Consensus 597 ~~C~~~g~C~~~~~g~~~C~C~~G~~G--~~C~~~--~~C~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy-----~ 664 (713)
..|..++.|.....+...|+|.+||.| ..|... ..|. ..|..++.|.....- .......|.|.+|| .
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~-~~~~ki~C~C~~g~~~~~~~ 88 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSG-SNGKKITCECTKPDSYPLFD 88 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCS-SSSCCCEEEECSTTCCEEGG
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCc-ccCCceEeEeCCCCccccee
Confidence 457788999887779999999999985 467765 3575 237777888762100 00144799999996 4
Q ss_pred cCCCCc
Q psy6570 665 GVRCQT 670 (713)
Q Consensus 665 G~~C~~ 670 (713)
|..|+.
T Consensus 89 gvf~~~ 94 (99)
T 1ob1_C 89 GIFCSH 94 (99)
T ss_dssp GTEECC
T ss_pred EEEecc
Confidence 666653
No 294
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.21 E-value=0.12 Score=55.03 Aligned_cols=156 Identities=11% Similarity=0.101 Sum_probs=95.4
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEc-CC-CCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLN-TG-LNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~-~~-~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
.....|++.|....|..+-. ..+.|.+.+++......++. .+ .....+|++.|.++.++++-.... .|..-++.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs---~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-~v~iwd~~ 195 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGS---KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-TTRLQDFK 195 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEE---TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-CEEEEETT
T ss_pred CCEEEEEEeCCCCCEEEEEe---CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-EEEEeecc
Confidence 34678899886666655554 56789999887654433332 22 356789999987777777664444 67778888
Q ss_pred CCCcEEEEeCC--CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEeCC
Q psy6570 104 GKNKFNLVDNN--IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFSTYR 179 (713)
Q Consensus 104 G~~~~~l~~~~--~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td~~ 179 (713)
+...+++.... ......|++++....|+.+ ...+.|...++++.....+... .....+|++. +..++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~dg~i~~wd~~~~~~~~~~~h---~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTG-DNVGNVILLNMDGKELWNLRMH---KKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEE-CSSSBEEEEESSSCBCCCSBCC---SSCEEEEEECTTCSSEEEEEET
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEE-eCCCcEeeeccCcceeEEEecc---cceEEeeeecCCCceEEEEecC
Confidence 76655555322 2234678999766555544 4567888888887644332211 1223445553 4456666555
Q ss_pred CCcEEEEccc
Q psy6570 180 TNNILKINKF 189 (713)
Q Consensus 180 ~~~i~~~~~~ 189 (713)
.+.|..++..
T Consensus 272 d~~v~iwd~~ 281 (435)
T 4e54_B 272 DQTVKIWDLR 281 (435)
T ss_dssp TSBCCEEETT
T ss_pred cceeeEEecc
Confidence 5555555543
No 295
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.18 E-value=0.002 Score=48.81 Aligned_cols=34 Identities=12% Similarity=0.313 Sum_probs=27.1
Q ss_pred CccCCCCCCCCCCCCeeeccCC-CceeeeCCCCcc
Q psy6570 218 NVTNHCDDKPCHQSALCINLPS-SHTCLCPDHLTE 251 (713)
Q Consensus 218 ~~~~~C~~~~C~~~~~C~~~~g-~~~C~C~~G~~~ 251 (713)
..+|+|..++-+..+.|+++++ +|+|.|++||..
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L 37 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL 37 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEE
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeE
Confidence 3578998653222899999999 899999999984
No 296
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.18 E-value=0.38 Score=53.18 Aligned_cols=184 Identities=8% Similarity=-0.080 Sum_probs=101.7
Q ss_pred CCceeEEEccCc----c-cEEecCC-CC-CceEEEec--cCCeEEEeecCCCCCCeEEEEecCCc--------eEEEEEc
Q psy6570 6 SGNVTRVKREMN----L-KTVLSNL-HD-PRGVAVDW--VGKNLYWTDAGGRSSNNIMVSTLEGR--------KKRTLLN 68 (713)
Q Consensus 6 ~~~I~~~~~~~~----~-~~~~~~~-~~-p~gla~D~--~~~~ly~td~~~~~~~~I~~~~~~G~--------~~~~l~~ 68 (713)
.+.|...++... . ...+... .. +..|++.+ .+..|+.+. ..+.|.+.+++.. .....+.
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~----~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 113 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD----ESGKVIVWGWTFDKESNSVEVNVKSEFQ 113 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE----TTSEEEEEEEEEEGGGTEEEEEEEEEEE
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec----CCCEEEEEeCCCCcccccccccccchhh
Confidence 455666666643 2 2223332 33 57899998 666665544 3678888887421 1222222
Q ss_pred CCCCCcceEEEcCCCCcEEEEccCCC--CeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 69 TGLNEPYDIALEPLSGRMFWTELGIK--PRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 69 ~~~~~p~~iavD~~~~~ly~td~~~~--~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
........|++.|...+|+....... ..|+..+ .......+.........|++.+.+..++++-...+.|...++.
T Consensus 114 ~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~ 191 (615)
T 1pgu_A 114 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP 191 (615)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT
T ss_pred cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC
Confidence 23456889999987777776654321 2444444 2222222233445678899998776566666667788888875
Q ss_pred CCceeEEEecCCCCc---cceeeeee-C-CeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 147 GKDRFVVYHTEDNGY---KPYKLEVF-E-DNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 147 g~~~~~~~~~~~~~~---~p~~i~~~-~-~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
.......+... .. ....+++. + +.++++-...+.|..++...+.....+
T Consensus 192 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 192 PFKFSASDRTH--HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TBEEEEEECSS--SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred Ccceeeeeccc--CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 54333222221 11 23455554 2 445555455677777776555444333
No 297
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.45 Score=48.65 Aligned_cols=181 Identities=8% Similarity=0.013 Sum_probs=97.1
Q ss_pred cCCceeEEEccCcc-cEE--ec-CCCCCceEEEecc--CCeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcce
Q psy6570 5 SSGNVTRVKREMNL-KTV--LS-NLHDPRGVAVDWV--GKNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYD 76 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~--~~-~~~~p~gla~D~~--~~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ 76 (713)
.++.|...++.... +.+ +. .......|++.+. +..|+.+ . ..+.|.+.+++... ...........+..
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-~---~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~ 106 (379)
T 3jrp_A 31 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC-S---YDGKVLIWKEENGRWSQIAVHAVHSASVNS 106 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-E---TTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEe-c---cCCEEEEEEcCCCceeEeeeecCCCcceEE
Confidence 35666666665322 111 22 2234566777644 4455544 4 46788888887654 22223233456888
Q ss_pred EEEcCC--CCcEEEEccCCCCeEEEEecCCC--CcEEEEeCCCCCCeeEEEeCC------------CCeEEEEcCCCCcE
Q psy6570 77 IALEPL--SGRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWPTGITIDYP------------SQRLYWADPKARTI 140 (713)
Q Consensus 77 iavD~~--~~~ly~td~~~~~~I~~~~~dG~--~~~~l~~~~~~~p~glavd~~------------~~~LY~~d~~~~~I 140 (713)
|++.|. ...|+.+. ... .|...++... .....+.........|++++. ++.++++-...+.|
T Consensus 107 ~~~~~~~~~~~l~~~~-~d~-~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 184 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVAS-SDG-KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLV 184 (379)
T ss_dssp EEECCGGGCSEEEEEE-TTS-EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCE
T ss_pred EEeCCCCCCCEEEEec-CCC-cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeE
Confidence 999986 44454444 333 6777777654 233334444556688999874 34444554455677
Q ss_pred EEEeCCCCce--eEEEecCCCCccceeeeeeC----CeEEEEeCCCCcEEEEcccCC
Q psy6570 141 ESINLNGKDR--FVVYHTEDNGYKPYKLEVFE----DNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 141 ~~~~~~g~~~--~~~~~~~~~~~~p~~i~~~~----~~ly~td~~~~~i~~~~~~~~ 191 (713)
...++..... ..+............+++.. +.++++-...+.|..++...+
T Consensus 185 ~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 185 KIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 7777653322 22222211122334555542 455555556667776665543
No 298
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.15 E-value=0.046 Score=65.62 Aligned_cols=139 Identities=12% Similarity=0.146 Sum_probs=89.7
Q ss_pred ceEEEeccCCeEEEeecCCCCCCeEE-EEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRSSNNIM-VSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~~~~I~-~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
..+++. .++.|+++.. ...|+ +.++++...+.+. .....+..+++.|..++|+++... . .|++.++++...
T Consensus 341 ~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~-~-~v~~~d~~tg~~ 412 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTR----EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR-F-EIMTVDLETGKP 412 (1045)
T ss_dssp EEECSS-SEEEEEEEET----TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT-S-EEEEEETTTCCE
T ss_pred EeeeEc-CCCeEEEEEC----CCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC-C-eEEEEECCCCce
Confidence 345554 3445555443 35788 8888877665555 334678899999877778776543 3 799999987766
Q ss_pred EEEEeCCCCCCeeEEEeCCCCeEEEEcCC---------CCcEEEEeCCCCceeEEEecCCCCccceeeee--eCCeEEEE
Q psy6570 108 FNLVDNNIQWPTGITIDYPSQRLYWADPK---------ARTIESINLNGKDRFVVYHTEDNGYKPYKLEV--FEDNLYFS 176 (713)
Q Consensus 108 ~~l~~~~~~~p~glavd~~~~~LY~~d~~---------~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~--~~~~ly~t 176 (713)
+.++.........+++++++.+|.++... ...|+..++++.....+... ......+++ ++.+||++
T Consensus 413 ~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~---~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 413 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE---NSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS---SSBEEEEEECTTSCEEEEE
T ss_pred EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC---CcccCCceEcCCCCEEEEE
Confidence 66664444455889999998888887542 25799999887653333222 222333443 45678877
Q ss_pred eC
Q psy6570 177 TY 178 (713)
Q Consensus 177 d~ 178 (713)
..
T Consensus 490 s~ 491 (1045)
T 1k32_A 490 SY 491 (1045)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 299
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.10 E-value=0.0011 Score=60.48 Aligned_cols=38 Identities=24% Similarity=0.777 Sum_probs=27.5
Q ss_pred CCCCCCCCCcEeccCCCCccccCCCCCcCCCCc-cCCCC
Q psy6570 418 CLNLKCQNGGVCVNKTTGLECDCPKFYYGKNCQ-YSQCK 455 (713)
Q Consensus 418 C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~C~-~~~C~ 455 (713)
|.+.+|.++++|.+..++|.|.|++||.|..|+ +++|.
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~~c~ 160 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEECC--
T ss_pred CcCCCCCCCCEEecCCCCceEeCCCCCcCcccccCcccC
Confidence 445667777888888888888888888888887 45554
No 300
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.10 E-value=0.1 Score=52.82 Aligned_cols=171 Identities=11% Similarity=-0.034 Sum_probs=94.0
Q ss_pred cCCceeEEEccCcc-----cEEecCCCCCceEEEeccCC-eEEEeecCCCCCCeEEEEec-CCceEEEEEcC-CCCCcce
Q psy6570 5 SSGNVTRVKREMNL-----KTVLSNLHDPRGVAVDWVGK-NLYWTDAGGRSSNNIMVSTL-EGRKKRTLLNT-GLNEPYD 76 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-----~~~~~~~~~p~gla~D~~~~-~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~~-~~~~p~~ 76 (713)
.++.|...++.... ..+......+..|++.+.+. .|+.+. ..+.|.+.++ ++.....+... .......
T Consensus 31 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~ 106 (342)
T 1yfq_A 31 WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT----VQGEILKVDLIGSPSFQALTNNEANLGICR 106 (342)
T ss_dssp TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE----TTSCEEEECSSSSSSEEECBSCCCCSCEEE
T ss_pred CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc----CCCeEEEEEeccCCceEeccccCCCCceEE
Confidence 35666666665433 22233445568899988766 566554 3678999998 77655444320 3356788
Q ss_pred EEEcCCCCcEEEEccCCCCeEEEEecCC---------CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 77 IALEPLSGRMFWTELGIKPRISGASIDG---------KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 77 iavD~~~~~ly~td~~~~~~I~~~~~dG---------~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
|++.+ .+.|+... ... .|...++.. ......+. .-..+..|++++.. |+++ ...+.|...++..
T Consensus 107 l~~~~-~~~l~s~~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 107 ICKYG-DDKLIAAS-WDG-LIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPL 179 (342)
T ss_dssp EEEET-TTEEEEEE-TTS-EEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEE-ESTTEEEEEESSC
T ss_pred EEeCC-CCEEEEEc-CCC-eEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEE-eCCCeEEEEECCc
Confidence 99998 55554444 333 677766553 11111111 23356778888543 5554 3456788888765
Q ss_pred -Cce--eEEEecCCCCccceeeeeeC--CeEEEEeCCCCcEEEEcc
Q psy6570 148 -KDR--FVVYHTEDNGYKPYKLEVFE--DNLYFSTYRTNNILKINK 188 (713)
Q Consensus 148 -~~~--~~~~~~~~~~~~p~~i~~~~--~~ly~td~~~~~i~~~~~ 188 (713)
... ...... .......+++.. +.++++....+.|...+.
T Consensus 180 ~~~~~~~~~~~~--~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 180 CEDDNGTIEESG--LKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp CTTCCCEEEECS--CSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred cccccceeeecC--CCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 322 222211 122345555542 445555555566665443
No 301
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.08 E-value=0.0035 Score=47.78 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=27.5
Q ss_pred ccCCCCC--CCCCCCCeeeccCCCceeee-CCCCccc
Q psy6570 219 VTNHCDD--KPCHQSALCINLPSSHTCLC-PDHLTEE 252 (713)
Q Consensus 219 ~~~~C~~--~~C~~~~~C~~~~g~~~C~C-~~G~~~~ 252 (713)
.+|||.. ++|..++.|+|++|+|+|.+ +.||.++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 4789976 47988899999999999984 4577754
No 302
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.05 E-value=0.24 Score=56.40 Aligned_cols=182 Identities=10% Similarity=0.046 Sum_probs=105.7
Q ss_pred CCceeEEEccCcc-cEEecCCC-------CCceEEEeccCCeEEEeec-CCCCCCeEEEEecCCceEEEEEcCCCCC--c
Q psy6570 6 SGNVTRVKREMNL-KTVLSNLH-------DPRGVAVDWVGKNLYWTDA-GGRSSNNIMVSTLEGRKKRTLLNTGLNE--P 74 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~~~~~~-------~p~gla~D~~~~~ly~td~-~~~~~~~I~~~~~~G~~~~~l~~~~~~~--p 74 (713)
...|++++..+.. ++++.... ...++++.+.++.|.++-. +......|.+.++++..... ...+.. .
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~ 170 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKY 170 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTT
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccc
Confidence 3557888765543 44432111 2567888888887766543 22224689999998765320 111122 2
Q ss_pred ceEEEcCCCCcEEEEccCC-----------CCeEEEEecCCCCc--EEEEeCC--CCCCeeEEEeCCCCeEEEEcC---C
Q psy6570 75 YDIALEPLSGRMFWTELGI-----------KPRISGASIDGKNK--FNLVDNN--IQWPTGITIDYPSQRLYWADP---K 136 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~-----------~~~I~~~~~dG~~~--~~l~~~~--~~~p~glavd~~~~~LY~~d~---~ 136 (713)
.+++..|.+..||++.... ..+|++.++.+... +.+.... ...-.++++++++++|+++.. .
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 6789988777788875421 23599998876542 2333321 124468899998888887653 3
Q ss_pred CCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeC---CCCcEEEEcccCCC
Q psy6570 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY---RTNNILKINKFGNS 192 (713)
Q Consensus 137 ~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~---~~~~i~~~~~~~~~ 192 (713)
...|+.++..+...+.+.........+ +..+++ ||+... ...+|++++..++.
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEV--HAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEE--EEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEE--EecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 457888877555555554432222222 223455 766543 35778888875543
No 303
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.03 E-value=0.089 Score=60.43 Aligned_cols=117 Identities=14% Similarity=0.146 Sum_probs=67.3
Q ss_pred cceEEEcCCCCcE-EEEccCC-CCeEEEEecCCCC-------cEEEE-eCCCCC-----CeeEEEeCCCCeEE-EEc--C
Q psy6570 74 PYDIALEPLSGRM-FWTELGI-KPRISGASIDGKN-------KFNLV-DNNIQW-----PTGITIDYPSQRLY-WAD--P 135 (713)
Q Consensus 74 p~~iavD~~~~~l-y~td~~~-~~~I~~~~~dG~~-------~~~l~-~~~~~~-----p~glavd~~~~~LY-~~d--~ 135 (713)
...++..|..+.| +++.... ...|+..++++.. .++++ ...-.+ +..+++.+++++|+ |.. .
T Consensus 262 ~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~ 341 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE 341 (740)
T ss_dssp EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT
T ss_pred EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC
Confidence 3456676654433 3444332 2368888877654 23332 222111 45788998888776 653 3
Q ss_pred CCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC------CCcEEEEcccCCC
Q psy6570 136 KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR------TNNILKINKFGNS 192 (713)
Q Consensus 136 ~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~------~~~i~~~~~~~~~ 192 (713)
+...|+.++++|...+.|....-....+.+ ++++.||++... ...|++++..++.
T Consensus 342 G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 342 GYRHICYFQIDKKDCTFITKGTWEVIGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp SCEEEEEEETTCSSCEESCCSSSCEEEEEE--ECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred CceEEEEEECCCCceEecccCCEEEEEEEE--EeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 456799999998876665543221222222 447788887654 2457777765543
No 304
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.99 E-value=0.0023 Score=58.28 Aligned_cols=36 Identities=31% Similarity=0.816 Sum_probs=21.7
Q ss_pred CCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcC
Q psy6570 554 KCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589 (713)
Q Consensus 554 ~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 589 (713)
+|.+.+|.++++|.+..++|+|.|++||+|..|+..
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 344555655666666666666666666666666554
No 305
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.99 E-value=0.0043 Score=56.22 Aligned_cols=38 Identities=26% Similarity=0.694 Sum_probs=22.8
Q ss_pred cCCccccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCc
Q psy6570 339 GTYCEKVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCES 384 (713)
Q Consensus 339 G~~C~~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~ 384 (713)
.+.|....|.. +|.++|.|... .+|.|++||+|..|+.
T Consensus 143 ~K~C~~~~C~~-~C~ngG~Cv~P-------~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 143 FKTCQQAECPG-GCRNGGFCNER-------RICECPDGFHGPHCEG 180 (188)
T ss_dssp EEEECCCCCTT-CCCTTCEECTT-------SCEECCTTCBTTTTCB
T ss_pred cccccCCccCC-CCCCCCEeCCC-------CcccCcCCCCCCCCcC
Confidence 34566666653 66666666543 2566666666666654
No 306
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.98 E-value=0.18 Score=51.41 Aligned_cols=117 Identities=8% Similarity=-0.004 Sum_probs=74.6
Q ss_pred CCCceEEEeccC---CeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 26 HDPRGVAVDWVG---KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 26 ~~p~gla~D~~~---~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
.....+++.+.. +.++++-. ..+.|.+.+++.......+......+..|++.|.++.++++-.... .|...++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-~i~iwd~ 145 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAG---SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDH-ALRLWNI 145 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEE---TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTS-CEEEEET
T ss_pred CcEEEEEeccCCCCCCCEEEEec---CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCC-eEEEEEe
Confidence 346778887763 23444544 4688999998754443334334467889999985566655544433 6888888
Q ss_pred CCCCcEEEE---eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 103 DGKNKFNLV---DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 103 dG~~~~~l~---~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
........+ .........|++++....|+.+. ..+.|...++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCC
Confidence 755444444 23445678899998766666554 456788877764
No 307
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.93 E-value=0.53 Score=47.17 Aligned_cols=180 Identities=8% Similarity=-0.043 Sum_probs=91.6
Q ss_pred cCCceeEEEccCcc---cEE---ecCCCCCceEEEecc-CCeEEEeecCCCCCCeEEEEecCCce---------EEEEEc
Q psy6570 5 SSGNVTRVKREMNL---KTV---LSNLHDPRGVAVDWV-GKNLYWTDAGGRSSNNIMVSTLEGRK---------KRTLLN 68 (713)
Q Consensus 5 ~~~~I~~~~~~~~~---~~~---~~~~~~p~gla~D~~-~~~ly~td~~~~~~~~I~~~~~~G~~---------~~~l~~ 68 (713)
.++.|...++.... +.+ ......+..|++.+. .+.++++-. ..+.|.+.+++... ....+.
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 31 SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS---YDKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE---TTSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc---CCCeEEEEecCCCcccccccCcceeeeec
Confidence 35666666766432 111 223344677888764 244444544 46788888887642 122232
Q ss_pred CCCCCcceEEEcCC--CCcEEEEccCCCCeEEEEecCCCC-cEEEE-----e-------CCCCCCeeEEEeCC---CCeE
Q psy6570 69 TGLNEPYDIALEPL--SGRMFWTELGIKPRISGASIDGKN-KFNLV-----D-------NNIQWPTGITIDYP---SQRL 130 (713)
Q Consensus 69 ~~~~~p~~iavD~~--~~~ly~td~~~~~~I~~~~~dG~~-~~~l~-----~-------~~~~~p~glavd~~---~~~L 130 (713)
........|++.|. ...|+.+. ... .|...++.... ...+. . ........+++.+. ...|
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~-~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLG-NDG-ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEE-TTC-EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEec-CCC-cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEE
Confidence 33456788999986 44444443 323 67777654332 11111 0 12345577888875 5555
Q ss_pred EEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCC-----eEEEEeCCCCcEEEEcccC
Q psy6570 131 YWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFED-----NLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 131 Y~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~-----~ly~td~~~~~i~~~~~~~ 190 (713)
.++... +.|............+............+++..+ .++++-...+.|..++...
T Consensus 186 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 186 AVSALE-QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEETT-EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EEecCC-CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 555443 3343333333333223222111223345565533 5666666667777776554
No 308
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.55 Score=46.45 Aligned_cols=156 Identities=12% Similarity=0.028 Sum_probs=83.3
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
...|++ .++.|+.+. ..+.|.+.+ .++....+. ........+++.+.++.++++-.... .|...+. ++..
T Consensus 107 i~~~~~--~~~~l~~~~----~d~~i~~~d-~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~-~i~i~d~-~~~~ 176 (313)
T 3odt_A 107 VCSLSF--QDGVVISGS----WDKTAKVWK-EGSLVYNLQ-AHNASVWDAKVVSFSENKFLTASADK-TIKLWQN-DKVI 176 (313)
T ss_dssp EEEEEE--ETTEEEEEE----TTSEEEEEE-TTEEEEEEE-CCSSCEEEEEEEETTTTEEEEEETTS-CEEEEET-TEEE
T ss_pred EEEEEe--cCCEEEEEe----CCCCEEEEc-CCcEEEecc-cCCCceeEEEEccCCCCEEEEEECCC-CEEEEec-CceE
Confidence 455555 344554443 467888888 444443333 33456778888774555555443333 5666662 2222
Q ss_pred EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEc
Q psy6570 108 FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKIN 187 (713)
Q Consensus 108 ~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~ 187 (713)
..+..........+++.+.+. +++-...+.|...++........... .......+++..+..+++-...+.|..++
T Consensus 177 ~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 177 KTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNGDIVSCGEDRTVRIWS 252 (313)
T ss_dssp EEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSCEEEEETTSEEEEEC
T ss_pred EEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCCCEEEEecCCEEEEEE
Confidence 222222444567889986544 44545667888888864433322222 12234556665332344445667777777
Q ss_pred ccCCCcceee
Q psy6570 188 KFGNSDFNVL 197 (713)
Q Consensus 188 ~~~~~~~~~~ 197 (713)
...+.....+
T Consensus 253 ~~~~~~~~~~ 262 (313)
T 3odt_A 253 KENGSLKQVI 262 (313)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCceeEEE
Confidence 6555444444
No 309
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.88 E-value=0.95 Score=46.66 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=75.2
Q ss_pred CCeEEEeecCCCCCCeEEEEecC-CceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEe-CC
Q psy6570 37 GKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVD-NN 114 (713)
Q Consensus 37 ~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~ 114 (713)
++.||+... .+.|..+++. |+.+- ...+..+..++++ ++.||+++.. . .|+.+++.....+-... ..
T Consensus 239 ~~~v~~~~~----~g~l~~~d~~tG~~~w---~~~~~~~~~~~~~--~~~l~~~~~~-g-~l~~~d~~tG~~~w~~~~~~ 307 (376)
T 3q7m_A 239 NGVVFALAY----NGNLTALDLRSGQIMW---KRELGSVNDFIVD--GNRIYLVDQN-D-RVMALTIDGGVTLWTQSDLL 307 (376)
T ss_dssp TTEEEEECT----TSCEEEEETTTCCEEE---EECCCCEEEEEEE--TTEEEEEETT-C-CEEEEETTTCCEEEEECTTT
T ss_pred CCEEEEEec----CcEEEEEECCCCcEEe---eccCCCCCCceEE--CCEEEEEcCC-C-eEEEEECCCCcEEEeecccC
Confidence 577777654 4678888874 44332 2223456677776 6889998753 2 68888875333221111 11
Q ss_pred CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEc
Q psy6570 115 IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKIN 187 (713)
Q Consensus 115 ~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~ 187 (713)
......+++. +++||+.+. .+.|+.++.............. ........+.++.||+... .+.|+.++
T Consensus 308 ~~~~~~~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~-~~~~~~~~~~~~~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 308 HRLLTSPVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQKVDS-SGFQTEPVAADGKLLIQAK-DGTVYSIT 375 (376)
T ss_dssp TSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCT-TCBCSCCEEETTEEEEEBT-TSCEEEEE
T ss_pred CCcccCCEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEecCC-CcceeCCEEECCEEEEEeC-CCEEEEEe
Confidence 2223445555 688998874 4678888864433222221101 1111233456888988764 45677664
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.83 E-value=0.54 Score=44.28 Aligned_cols=150 Identities=10% Similarity=0.011 Sum_probs=89.9
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC-------ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCe
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG-------RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPR 96 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G-------~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~ 96 (713)
+..+...||+++ ++.||.. . .+.+++.+... ...+.|-..+.+.-..|.+|+ +|.||.+.. ++
T Consensus 39 gw~~~~~laf~P-~G~LYaV-~----~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~d---G~ 108 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV-L----NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVSK---DK 108 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE-E----TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEET---TE
T ss_pred ccccceeEEECC-CccEEEE-e----CCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeCC---CE
Confidence 467888999999 7899998 4 35788888743 223444444445567899995 899999832 48
Q ss_pred EEEEec--CCCCc-----EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC-CC------ceeEEEecCCCCcc
Q psy6570 97 ISGASI--DGKNK-----FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN-GK------DRFVVYHTEDNGYK 162 (713)
Q Consensus 97 I~~~~~--dG~~~-----~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-g~------~~~~~~~~~~~~~~ 162 (713)
|+|.+. ++... .+|....-..-..|+++| ++.||-+. .+++++-..- +. ..+.+....- ...
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~-~~y 184 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGW-DTF 184 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSG-GGE
T ss_pred EEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCc-ceE
Confidence 999876 33321 222232333447788884 68899887 5557664432 21 1122221111 112
Q ss_pred ceeeeeeCCeEEEEeCCCCcEEEEccc
Q psy6570 163 PYKLEVFEDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 163 p~~i~~~~~~ly~td~~~~~i~~~~~~ 189 (713)
++-+...++.||+++ .+++++....
T Consensus 185 r~l~f~~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 185 KFLFFSSVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp EEEEECTTSCEEEEE--TTEEEEESCC
T ss_pred EEEEECCCCcEEEEe--CCeEEecCCc
Confidence 221212266788887 6678877554
No 311
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.82 E-value=0.056 Score=59.42 Aligned_cols=110 Identities=14% Similarity=0.126 Sum_probs=71.6
Q ss_pred cCCCCCceEEEeccCCeEEEeecCCC------------------CCCeEEEEecCCce--------EEEEEc--------
Q psy6570 23 SNLHDPRGVAVDWVGKNLYWTDAGGR------------------SSNNIMVSTLEGRK--------KRTLLN-------- 68 (713)
Q Consensus 23 ~~~~~p~gla~D~~~~~ly~td~~~~------------------~~~~I~~~~~~G~~--------~~~l~~-------- 68 (713)
+.+.+|++|++++.++.||++-.++. ..+.|+++.+++.. ...++.
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 46788999999999999999866431 13579988765432 111211
Q ss_pred ------------CCCCCcceEEEcCCCCcEEE-EccC-----------CCCeEEEEecCCCCcEEEEeC-CCCCCeeEEE
Q psy6570 69 ------------TGLNEPYDIALEPLSGRMFW-TELG-----------IKPRISGASIDGKNKFNLVDN-NIQWPTGITI 123 (713)
Q Consensus 69 ------------~~~~~p~~iavD~~~~~ly~-td~~-----------~~~~I~~~~~dG~~~~~l~~~-~~~~p~glav 123 (713)
..+..|-.|+||+. |+||+ +|.+ ++ .++....+....+.++.. .-.-..|+++
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn-~~~~~~~~~g~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNN-QMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSC-EEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred cccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccc-eEEEEeCCCCeEEEEEeCCCCccCcCeeE
Confidence 12667999999985 55665 4532 23 566666654444444432 2345689999
Q ss_pred eCCCCeEEEEc
Q psy6570 124 DYPSQRLYWAD 134 (713)
Q Consensus 124 d~~~~~LY~~d 134 (713)
.++.+.||+.-
T Consensus 539 spDg~tlfvni 549 (592)
T 3zwu_A 539 SPDQKTLFVGI 549 (592)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99888899874
No 312
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.81 E-value=0.0025 Score=65.75 Aligned_cols=24 Identities=25% Similarity=0.725 Sum_probs=20.1
Q ss_pred ee-cCCCCccCCCCCCccccCCCCCCcccCCCCccCCC
Q psy6570 471 KC-MCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKK 507 (713)
Q Consensus 471 ~C-~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~ 507 (713)
+| .|.+||+|..|+. |.+||+|..
T Consensus 335 ~C~~C~~n~~G~~Ce~-------------C~~Gyyg~~ 359 (375)
T 4aqt_A 335 HCTNCRDNTDGAKCER-------------CRENFFRLG 359 (375)
T ss_dssp EECSCTTTEESTTSCE-------------ECSSEECCT
T ss_pred CCCCCCCCCcCCCCCC-------------CCcCcccCc
Confidence 67 5999999999985 889998864
No 313
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.79 E-value=0.37 Score=48.83 Aligned_cols=176 Identities=8% Similarity=-0.073 Sum_probs=92.1
Q ss_pred CCceeEEEccCcccE-E--ecCCCCCceEEEeccC---CeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEE
Q psy6570 6 SGNVTRVKREMNLKT-V--LSNLHDPRGVAVDWVG---KNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIA 78 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~-~--~~~~~~p~gla~D~~~---~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~ia 78 (713)
++.|...++.+.... + .........+++.+.. ..|+.. . ..+.|.+.+++... ....+.........|+
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 118 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG-D---FGGNLHIWNLEAPEMPVYSVKGHKEIINAID 118 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE-E---TTSCEEEECTTSCSSCSEEECCCSSCEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe-c---CCCeEEEEeCCCCCccEEEEEecccceEEEe
Confidence 567777777654322 1 2333456778887763 445544 4 46788888887544 2222323234455664
Q ss_pred ------EcCCCCcEEEEccCCCCeEEEEecCCCC-cEEEEeCC----CCCCeeEE----EeCCCCeEEEEcCCCCcEEEE
Q psy6570 79 ------LEPLSGRMFWTELGIKPRISGASIDGKN-KFNLVDNN----IQWPTGIT----IDYPSQRLYWADPKARTIESI 143 (713)
Q Consensus 79 ------vD~~~~~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~----~~~p~gla----vd~~~~~LY~~d~~~~~I~~~ 143 (713)
+.+....|+... ... .|...++.... ....+... ......++ +++....|+ +-...+.|...
T Consensus 119 ~~~~~~~s~~~~~l~~~~-~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~-~~~~d~~i~i~ 195 (357)
T 3i2n_A 119 GIGGLGIGEGAPEIVTGS-RDG-TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVC-AGYDNGDIKLF 195 (357)
T ss_dssp EESGGGCC-CCCEEEEEE-TTS-CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEE-EEETTSEEEEE
T ss_pred eccccccCCCccEEEEEe-CCC-eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEE-EEccCCeEEEE
Confidence 344444444443 323 67777776543 22333211 11345566 444444444 44456788888
Q ss_pred eCCCCceeEEEecCCCCccceeeeee----CCeEEEEeCCCCcEEEEcccCC
Q psy6570 144 NLNGKDRFVVYHTEDNGYKPYKLEVF----EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~p~~i~~~----~~~ly~td~~~~~i~~~~~~~~ 191 (713)
++........... ......+++. .+.++++....+.|..++...+
T Consensus 196 d~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 196 DLRNMALRWETNI---KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp ETTTTEEEEEEEC---SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ECccCceeeecCC---CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 8877655333322 2234455554 3444455455667777665443
No 314
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=95.76 E-value=0.0081 Score=62.24 Aligned_cols=27 Identities=30% Similarity=0.819 Sum_probs=22.2
Q ss_pred CCeec-CCCCccCCCCCCccccCCCCCCcccCCCCccCCCC
Q psy6570 469 GPKCM-CSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKC 508 (713)
Q Consensus 469 ~~~C~-C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C 508 (713)
+.+|. |..++.|..|+. |.+||+|+..
T Consensus 356 ~G~C~~C~~nt~G~~CEr-------------C~~GYyg~p~ 383 (403)
T 2y38_A 356 GGVCLDCQHHTTGINCER-------------CLPGFFRAPD 383 (403)
T ss_dssp CEEESSCCSSEESTTSCE-------------ECTTCEECTT
T ss_pred CCCCCCCcCcCcCCCCCc-------------CCCCccCCCC
Confidence 34885 999999999985 8899998654
No 315
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.76 E-value=0.88 Score=46.20 Aligned_cols=138 Identities=12% Similarity=0.027 Sum_probs=79.3
Q ss_pred CCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++.....+. +. .......|++.+.+ .++++-. ..+.|.+.++........+......+..|++.|..
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~---~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGA---CDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEE---TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS
T ss_pred CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC-CEEEEEe---CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCC
Confidence 4556666655432221 22 23446788888754 4555555 56789999986544433343334568899999854
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeC-C-CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDN-N-IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR 150 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~-~-~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~ 150 (713)
. ++++-.... .|...++........+.. . ......|++++.+..|..+ ...+.|...++.....
T Consensus 239 ~-~l~s~s~d~-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g-~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 239 N-AFATGSDDA-TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YDDFNCNVWDALKADR 304 (340)
T ss_dssp S-EEEEEETTS-CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCE
T ss_pred C-EEEEEcCCC-cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE-CCCCeEEEEEcccCcE
Confidence 4 444443333 677777765433222221 1 2245788999766555544 4567788888754433
No 316
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.75 E-value=0.0018 Score=47.05 Aligned_cols=31 Identities=32% Similarity=0.845 Sum_probs=26.3
Q ss_pred CCCCCcEEcC----CCCCeeccCCCCCCCCCCccc
Q psy6570 512 TCLNGGTCIP----NSKNNVCKCPSQYTGRRCECA 542 (713)
Q Consensus 512 ~C~~~g~C~~----~~~~~~C~C~~g~~G~~C~~~ 542 (713)
+|.|+|+|.. ....+.|.|++||+|.+||..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 7999999983 334789999999999999865
No 317
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.75 E-value=1.3 Score=45.67 Aligned_cols=157 Identities=10% Similarity=0.066 Sum_probs=88.4
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecC-C-ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-G-RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G-~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
...+++.+.++.++++-. ..+.|.+.++. + .....+. ........|++.|. +.++++-.... .|...++...
T Consensus 208 v~~~~~~~~~~~~l~sgs---~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~-~~~l~s~s~D~-~i~lwd~~~~ 281 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGS---CDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPD-GQRFGTGSDDG-TCRLFDMRTG 281 (380)
T ss_dssp EEEEEECSSSCCEEEEEE---TTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTT-SSEEEEECSSS-CEEEEETTTT
T ss_pred eEEEEeecCCCCEEEEEE---CCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecC-CCeEEEEcCCC-eEEEEECCCC
Confidence 455667665677777766 67889898875 2 3333332 33356789999974 55555554433 6777777654
Q ss_pred CcEEEEeCC-------CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC-C-CCccceeeeee-CCeEEE
Q psy6570 106 NKFNLVDNN-------IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE-D-NGYKPYKLEVF-EDNLYF 175 (713)
Q Consensus 106 ~~~~l~~~~-------~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~-~-~~~~p~~i~~~-~~~ly~ 175 (713)
.....+... ......+++++.+..|+ +-...+.|+..++............ . .......|++. ++.+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLF-AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE-EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEE-EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 433333211 12357899997665555 4455678888887544332222110 1 11122445554 344555
Q ss_pred EeCCCCcEEEEcccCC
Q psy6570 176 STYRTNNILKINKFGN 191 (713)
Q Consensus 176 td~~~~~i~~~~~~~~ 191 (713)
+-...+.|...+..+.
T Consensus 361 sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 361 TGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EECTTSCEEEEECCSS
T ss_pred EeeCCCCEEEEecCCC
Confidence 6556667766665443
No 318
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.72 E-value=0.46 Score=54.40 Aligned_cols=181 Identities=8% Similarity=0.058 Sum_probs=103.6
Q ss_pred CceeEEEcc---C-cccEEecC--CC-----CCceEEEeccCCeEEEeec-CCCCCCeEEEEecCCceEEEEEcCCCCCc
Q psy6570 7 GNVTRVKRE---M-NLKTVLSN--LH-----DPRGVAVDWVGKNLYWTDA-GGRSSNNIMVSTLEGRKKRTLLNTGLNEP 74 (713)
Q Consensus 7 ~~I~~~~~~---~-~~~~~~~~--~~-----~p~gla~D~~~~~ly~td~-~~~~~~~I~~~~~~G~~~~~l~~~~~~~p 74 (713)
..|++++.. + ..++++.. +. ...++++.+.++.|.++-. +......|.+.++++.......... ...
T Consensus 133 ~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~-~~~ 211 (741)
T 1yr2_A 133 SQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW-VKF 211 (741)
T ss_dssp CEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE-EES
T ss_pred EEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC-cee
Confidence 566777765 3 33443221 11 3456788888877766543 1111246999999876544332111 112
Q ss_pred ceEEEcCCCCcEEEEccCC------------CCeEEEEecCCCCc--EEEEeCCC--CCCeeEEEeCCCCeEEEEcC---
Q psy6570 75 YDIALEPLSGRMFWTELGI------------KPRISGASIDGKNK--FNLVDNNI--QWPTGITIDYPSQRLYWADP--- 135 (713)
Q Consensus 75 ~~iavD~~~~~ly~td~~~------------~~~I~~~~~dG~~~--~~l~~~~~--~~p~glavd~~~~~LY~~d~--- 135 (713)
.+++..|. +.||++.... ..+|++.++.+... +.+..... ..-.++++++++++|+++-.
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 46888877 7787765321 22588888764432 23333211 13468899988888877653
Q ss_pred -CCCcEEEEeCCCC--c-eeEEEecCCCCccceeeeeeCCeEEEEeCC---CCcEEEEcccCC
Q psy6570 136 -KARTIESINLNGK--D-RFVVYHTEDNGYKPYKLEVFEDNLYFSTYR---TNNILKINKFGN 191 (713)
Q Consensus 136 -~~~~I~~~~~~g~--~-~~~~~~~~~~~~~p~~i~~~~~~ly~td~~---~~~i~~~~~~~~ 191 (713)
....|+.+++++. . .+.+.........+ +..++++||+.... ..+|++++..++
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~--~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF--VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEE--EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEE--EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 3568999998765 3 44444332212222 34567788776432 456888876553
No 319
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.72 E-value=0.21 Score=50.45 Aligned_cols=178 Identities=8% Similarity=-0.036 Sum_probs=95.2
Q ss_pred cCCceeEEEc-cCcccEEec---CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC---------ceEEEEEcCCC
Q psy6570 5 SSGNVTRVKR-EMNLKTVLS---NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG---------RKKRTLLNTGL 71 (713)
Q Consensus 5 ~~~~I~~~~~-~~~~~~~~~---~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G---------~~~~~l~~~~~ 71 (713)
.++.|...++ .+.....+. ....+..|++.+ .+.|+ +-. ..+.|.+.++.. ......+. ..
T Consensus 77 ~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~-s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~ 150 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLI-AAS---WDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK 150 (342)
T ss_dssp TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEE-EEE---TTSEEEEECHHHHTTBCEEEEESCSSSSS-SC
T ss_pred CCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEE-EEc---CCCeEEEEcccccccccccccCCeeeEEe-eC
Confidence 4567777777 654433333 334467888887 55555 444 467888888653 11111111 22
Q ss_pred CCcceEEEcCCCCcEEEEccCCCCeEEEEecCC-CC--cEEEEeCCCCCCeeEEEeC-CCCeEEEEcCCCCcEEEEeCCC
Q psy6570 72 NEPYDIALEPLSGRMFWTELGIKPRISGASIDG-KN--KFNLVDNNIQWPTGITIDY-PSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG-~~--~~~l~~~~~~~p~glavd~-~~~~LY~~d~~~~~I~~~~~~g 147 (713)
..+..|++++.. |+.... .. .|...++.. .. ........-..+..|++++ ....|+.+. ..+.|...+++.
T Consensus 151 ~~v~~~~~~~~~--l~~~~~-d~-~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~ 225 (342)
T 1yfq_A 151 NKIFTMDTNSSR--LIVGMN-NS-QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDD 225 (342)
T ss_dssp CCEEEEEECSSE--EEEEES-TT-EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCT
T ss_pred CceEEEEecCCc--EEEEeC-CC-eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcC
Confidence 457788888643 555443 23 688888776 22 2223333344578899997 665555544 456666655544
Q ss_pred C-------ceeEEEecCCC------Cccceeeeee-CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 148 K-------DRFVVYHTEDN------GYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 148 ~-------~~~~~~~~~~~------~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
. ....+...... ......+++. .+.++++....+.|..++...+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 3 22333222110 1133455554 233444444566777777654443
No 320
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.69 E-value=1.4 Score=45.65 Aligned_cols=155 Identities=13% Similarity=0.026 Sum_probs=88.8
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
...|++.+.+..|+.. . ..+.|.+.++........+.........|++.|...+|+.+. ... .|..-++.....
T Consensus 126 v~~v~~s~dg~~l~s~-~---~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~-~v~iwd~~~~~~ 199 (393)
T 1erj_A 126 IRSVCFSPDGKFLATG-A---EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-GDR-TVRIWDLRTGQC 199 (393)
T ss_dssp EEEEEECTTSSEEEEE-E---TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTS-EEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEE-c---CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec-CCC-cEEEEECCCCee
Confidence 4578888765555544 3 467899999876655444444445678899998665555443 333 677777765433
Q ss_pred EEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec-----CCCCccceeeeee-CCeEEEEeCCCC
Q psy6570 108 FNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT-----EDNGYKPYKLEVF-EDNLYFSTYRTN 181 (713)
Q Consensus 108 ~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~-----~~~~~~p~~i~~~-~~~ly~td~~~~ 181 (713)
...+. .......+++.+.+++++++-...+.|...++........... .........+++. ++.++++....+
T Consensus 200 ~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 200 SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 33332 2334678889885666666666667788888754432222111 0011223455554 344445555566
Q ss_pred cEEEEccc
Q psy6570 182 NILKINKF 189 (713)
Q Consensus 182 ~i~~~~~~ 189 (713)
.|...+..
T Consensus 279 ~v~~wd~~ 286 (393)
T 1erj_A 279 SVKLWNLQ 286 (393)
T ss_dssp EEEEEEC-
T ss_pred EEEEEECC
Confidence 67666654
No 321
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=95.68 E-value=0.0071 Score=43.11 Aligned_cols=24 Identities=29% Similarity=0.562 Sum_probs=20.8
Q ss_pred CCCCCCcEEeecCCCceeeCCCCCcC
Q psy6570 558 NYCSNNGTCVLIEGKPSCKCLPPYSG 583 (713)
Q Consensus 558 ~~C~~~~~C~~~~g~~~C~C~~G~~G 583 (713)
.+|. +.|+++.|+|+|.|++||.+
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEE
T ss_pred CCCC--CEeECCCCCeEEECCCCCeE
Confidence 4675 49999999999999999985
No 322
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.65 E-value=1.5 Score=45.11 Aligned_cols=103 Identities=11% Similarity=0.124 Sum_probs=61.1
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
++.||+.... . .|..+++..... +....+..+.+++++ +++||++.. .+.|+.++.......-.... .....
T Consensus 239 ~~~v~~~~~~-g-~l~~~d~~tG~~--~w~~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~-~~~~~ 310 (376)
T 3q7m_A 239 NGVVFALAYN-G-NLTALDLRSGQI--MWKRELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSD-LLHRL 310 (376)
T ss_dssp TTEEEEECTT-S-CEEEEETTTCCE--EEEECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECT-TTTSC
T ss_pred CCEEEEEecC-c-EEEEEECCCCcE--EeeccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecc-cCCCc
Confidence 5778887532 2 688887743222 222234456677777 789999874 46789998754433222221 11122
Q ss_pred ceeeeeeCCeEEEEeCCCCcEEEEcccCCCcc
Q psy6570 163 PYKLEVFEDNLYFSTYRTNNILKINKFGNSDF 194 (713)
Q Consensus 163 p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~ 194 (713)
.....+.++.||+.+. .+.|+.++...+...
T Consensus 311 ~~~~~~~~~~l~v~~~-~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 311 LTSPVLYNGNLVVGDS-EGYLHWINVEDGRFV 341 (376)
T ss_dssp CCCCEEETTEEEEECT-TSEEEEEETTTCCEE
T ss_pred ccCCEEECCEEEEEeC-CCeEEEEECCCCcEE
Confidence 3344566888888864 467888887665543
No 323
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.63 E-value=0.2 Score=50.96 Aligned_cols=107 Identities=7% Similarity=-0.009 Sum_probs=62.6
Q ss_pred EeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcC---CCCcEEEEccCCCCeEEEEecCCCC-cE
Q psy6570 33 VDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEP---LSGRMFWTELGIKPRISGASIDGKN-KF 108 (713)
Q Consensus 33 ~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~---~~~~ly~td~~~~~~I~~~~~dG~~-~~ 108 (713)
+.+.+..|+ +-. ..+.|.+.++........... ...+..|+++| ..+.|+... ... .|...++.... ..
T Consensus 176 ~~~~~~~l~-~~~---~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~-~dg-~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 176 YNQEERVVC-AGY---DNGDIKLFDLRNMALRWETNI-KNGVCSLEFDRKDISMNKLVATS-LEG-KFHVFDMRTQHPTK 248 (357)
T ss_dssp CC-CCCEEE-EEE---TTSEEEEEETTTTEEEEEEEC-SSCEEEEEESCSSSSCCEEEEEE-STT-EEEEEEEEEEETTT
T ss_pred cCCCCCEEE-EEc---cCCeEEEEECccCceeeecCC-CCceEEEEcCCCCCCCCEEEEEC-CCC-eEEEEeCcCCCccc
Confidence 334444444 444 467899999887665444322 35688999998 455555544 323 56666554322 21
Q ss_pred EEE----eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC
Q psy6570 109 NLV----DNNIQWPTGITIDYPSQRLYWADPKARTIESINLN 146 (713)
Q Consensus 109 ~l~----~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~ 146 (713)
.+. .........|++++.+..++++-...+.|...++.
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 221 23445678899997666466665566677666654
No 324
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.61 E-value=0.8 Score=46.03 Aligned_cols=138 Identities=14% Similarity=0.020 Sum_probs=81.0
Q ss_pred CCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++..... .+.........|++++.+..|+ +-. ..+.|.+.++++.....+.. .......+++.|..
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s---~D~~i~vwd~~~~~~~~~~~-h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMII-SGS---RDKTIKVWTIKGQCLATLLG-HNDWVSQVRVVPNE 160 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEE-EEE---TTSCEEEEETTSCEEEEECC-CSSCEEEEEECCC-
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEE-EEe---CCCeEEEEECCCCeEEEEec-cCCcEEEEEEccCC
Confidence 45566666654332 2223344567888887655454 544 46789999998876655542 23456677776642
Q ss_pred -----CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce
Q psy6570 84 -----GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR 150 (713)
Q Consensus 84 -----~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~ 150 (713)
+.++++-.... .|..-++........+.........|++++.+.+|..+ ...+.|...++.....
T Consensus 161 ~~~~~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 161 KADDDSVTIISAGNDK-MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA-GKDGEIMLWNLAAKKA 230 (319)
T ss_dssp -----CCEEEEEETTS-CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTTEE
T ss_pred CCCCCccEEEEEeCCC-EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcE
Confidence 33445443333 67777776543333333344556889999766555544 4557788888765443
No 325
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.59 E-value=0.0037 Score=45.44 Aligned_cols=31 Identities=29% Similarity=0.715 Sum_probs=24.9
Q ss_pred CCCCCcEEee----cCCCceeeCCCCCcCCCCCcC
Q psy6570 559 YCSNNGTCVL----IEGKPSCKCLPPYSGKQCTER 589 (713)
Q Consensus 559 ~C~~~~~C~~----~~g~~~C~C~~G~~G~~C~~~ 589 (713)
+|.++|+|.. ..+.|.|.|++||+|.+|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 7888999983 234688999999999999754
No 326
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.56 E-value=1.6 Score=45.04 Aligned_cols=160 Identities=8% Similarity=0.051 Sum_probs=90.3
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC-----CCCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT-----GLNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~-----~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
...+++.+..+..+++-. ..+.|.+.++........+.. .......+++.+.++.++++-.... .|..-++
T Consensus 160 v~~~~~~~~~~~~l~s~s---~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-~v~~wd~ 235 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGS---GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-TVRLWDL 235 (380)
T ss_dssp CCCCBCCSSSSSCEEEEC---TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-CEEEEET
T ss_pred eEEEEEecCCCCEEEEEC---CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-eEEEEEC
Confidence 344555544444444544 567888888765544433321 1234567888877788888765544 6777776
Q ss_pred C-CCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCC-C----Cccceeeeee-CCeEEE
Q psy6570 103 D-GKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTED-N----GYKPYKLEVF-EDNLYF 175 (713)
Q Consensus 103 d-G~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~-~----~~~p~~i~~~-~~~ly~ 175 (713)
. .......+.......+.|++.|... ++++-...+.|...++.......+..... . ......+++. .+.+++
T Consensus 236 ~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 236 RITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp TTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred CCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 5 2222233333445678899997654 44555567788888876544333322211 0 1112345554 445556
Q ss_pred EeCCCCcEEEEcccCCC
Q psy6570 176 STYRTNNILKINKFGNS 192 (713)
Q Consensus 176 td~~~~~i~~~~~~~~~ 192 (713)
+-...+.|+..+...+.
T Consensus 315 ~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EECTTSCEEEEETTTCC
T ss_pred EEECCCCEEEEECCCCc
Confidence 66667778877754443
No 327
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.51 E-value=1.4 Score=49.66 Aligned_cols=58 Identities=2% Similarity=-0.065 Sum_probs=29.5
Q ss_pred CcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 138 RTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 138 ~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
+.|..+|+......--..... ......+...++.||+. ...+.|+.++..++..+..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCC-CCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeee
Confidence 457777765433222222111 11112244456677776 45667777777666554444
No 328
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.50 E-value=0.0087 Score=54.20 Aligned_cols=39 Identities=41% Similarity=0.956 Sum_probs=31.9
Q ss_pred cCCCCcCCCCCCCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCcc
Q psy6570 623 GITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTL 671 (713)
Q Consensus 623 G~~C~~~~~C~~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~ 671 (713)
.+.|.. ..|...|.|+|.|+.+ .+|.|++||+|..|++.
T Consensus 143 ~K~C~~-~~C~~~C~ngG~Cv~P---------~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 143 FKTCQQ-AECPGGCRNGGFCNER---------RICECPDGFHGPHCEGT 181 (188)
T ss_dssp EEEECC-CCCTTCCCTTCEECTT---------SCEECCTTCBTTTTCBC
T ss_pred cccccC-CccCCCCCCCCEeCCC---------CcccCcCCCCCCCCcCC
Confidence 345655 5688899999999873 58999999999999875
No 329
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.47 E-value=1.6 Score=45.94 Aligned_cols=177 Identities=12% Similarity=0.021 Sum_probs=91.0
Q ss_pred cCCceeEEEccCcccEE-ecC-CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNLKTV-LSN-LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~~-~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...++.+..... +.+ ......|++ .+ .++++-. ..+.|.+.+++.......+.........|+++
T Consensus 151 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~-- 222 (435)
T 1p22_A 151 RDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DE-RVIITGS---SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 222 (435)
T ss_dssp SSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CS-SEEEEEE---TTSCEEEEESSSCCEEEEECCCCSCEEEEECC--
T ss_pred CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC-CEEEEEc---CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--
Confidence 35566666665433221 222 222344444 33 4444544 46789998887544433333333456667765
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcE---EEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKF---NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~---~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
.+.|+... ... .|...++...... ..+.........|+++ ...|+.+. ..+.|...++........... .
T Consensus 223 ~~~l~s~s-~dg-~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~--~ 295 (435)
T 1p22_A 223 NGMMVTCS-KDR-SIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS-GDRTIKVWNTSTCEFVRTLNG--H 295 (435)
T ss_dssp TTEEEEEE-TTS-CEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEE-TTSEEEEEETTTCCEEEEEEC--C
T ss_pred CCEEEEee-CCC-cEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEe-CCCeEEEEECCcCcEEEEEcC--C
Confidence 34444433 333 6777777654433 2222233345667775 55555554 467788888765433322222 1
Q ss_pred CccceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 160 GYKPYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 160 ~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
......+++.++ ++++-...+.|..++...+.....+
T Consensus 296 ~~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 296 KRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp SSCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCcEEEEEeCCC-EEEEEeCCCeEEEEECCCCCEEEEE
Confidence 223345555544 4444456677777776655444433
No 330
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.44 E-value=2.3 Score=44.83 Aligned_cols=178 Identities=9% Similarity=0.032 Sum_probs=89.7
Q ss_pred CCceeEEEccCcccE--EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKT--VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~--~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...++.....+ +.........+++ .++.|+.+. ..+.|.+.++........+.........|++| .
T Consensus 218 dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~ 289 (445)
T 2ovr_B 218 DATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA----YDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--G 289 (445)
T ss_dssp TSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE----TTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC--S
T ss_pred CCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc----CCCEEEEEECCCCcEeEEecCCCCceEEEEEC--C
Confidence 455666665543221 1222233445555 344444443 35778888876544333333223445566663 3
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEecCCCCcc
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHTEDNGYK 162 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~ 162 (713)
..|+... ... .|...++........+.........++++ .+.|+ +-...+.|...++..... ..+.........
T Consensus 290 ~~l~~~~-~d~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 364 (445)
T 2ovr_B 290 IHVVSGS-LDT-SIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 364 (445)
T ss_dssp SEEEEEE-TTS-CEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEE-EEETTSCEEEEETTTCCEEEEECSTTSCSSC
T ss_pred CEEEEEe-CCC-eEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEE-EEeCCCeEEEEECCCCcEEEEEccCCCCCCC
Confidence 3444443 333 67777776544433333333445566665 44444 444567788888754333 333221111223
Q ss_pred ceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 163 PYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 163 p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
...++++++ ++++....+.|..++...+.....+
T Consensus 365 v~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 365 VTCLQFNKN-FVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEEECSS-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCC-EEEEEeCCCeEEEEECCCCceeeee
Confidence 345666554 4445456677887876655544433
No 331
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.41 E-value=0.0057 Score=43.99 Aligned_cols=29 Identities=28% Similarity=0.666 Sum_probs=22.3
Q ss_pred CCCCCcEEeecCCCceeeCCCCCc----CCCCCcC
Q psy6570 559 YCSNNGTCVLIEGKPSCKCLPPYS----GKQCTER 589 (713)
Q Consensus 559 ~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~ 589 (713)
.|+ ..|+|+.|+|+|.|++||. |..|.++
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccC
Confidence 464 3799999999999999986 5667665
No 332
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.39 E-value=0.003 Score=61.70 Aligned_cols=37 Identities=19% Similarity=0.445 Sum_probs=29.3
Q ss_pred CccCCCC--CCCCCCCCeeeccCCCceeeeCCCCccccc
Q psy6570 218 NVTNHCD--DKPCHQSALCINLPSSHTCLCPDHLTEELN 254 (713)
Q Consensus 218 ~~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~~~~~ 254 (713)
..+|||. ..+|+.++.|+|++|+|.|.|++||.|+..
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~ 41 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR 41 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC
Confidence 4678998 458999999999999999999999997654
No 333
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.38 E-value=0.0054 Score=43.31 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=20.6
Q ss_pred CCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 227 PCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 227 ~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
+| .+.|+|++|+|+|.|++||..
T Consensus 7 ~C--~~~C~n~~gs~~C~C~~Gy~L 29 (51)
T 1kig_L 7 GC--DQFCREERSEVRCSCAHGYVL 29 (51)
T ss_dssp SS--SSCCCEETTEECCCCCTTEEE
T ss_pred Cc--CCEeEcCCCCeEEeCCCCcEE
Confidence 56 689999999999999999983
No 334
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.36 E-value=2.3 Score=46.87 Aligned_cols=77 Identities=10% Similarity=-0.004 Sum_probs=43.2
Q ss_pred eeEEEeCCCCeEEEEcC------------------------------------CCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 119 TGITIDYPSQRLYWADP------------------------------------KARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 119 ~glavd~~~~~LY~~d~------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
.++++|+.+++||+... ..+.|+.+++......--..... ...
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~ 467 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAW 467 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-Ccc
Confidence 46899999999999742 23567777764322221111111 111
Q ss_pred ceeeeeeCCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 163 PYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 163 p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
...+...++.||+.. ..+.|+.++...++.+..+
T Consensus 468 ~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 468 GGTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp SBCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred ceeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEE
Confidence 122344567788754 4567888887666554433
No 335
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.36 E-value=0.025 Score=45.45 Aligned_cols=69 Identities=20% Similarity=0.427 Sum_probs=49.2
Q ss_pred CCCCCCCeEecCCCCcceeecCCCccc--CCCCcCCC-CC---CCCCCCCeecCCCCccCCCCCceeeCCCCc-----cc
Q psy6570 597 NYCDNAGLCSYSKQGKPVCTCVNGWSG--ITCSERVS-CA---HFCFNGGTCREQNYSLDPDLKPICICPRGY-----AG 665 (713)
Q Consensus 597 ~~C~~~g~C~~~~~g~~~C~C~~G~~G--~~C~~~~~-C~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy-----~G 665 (713)
..|..++.|....+|.-.|+|..||.+ ..|...++ |. .-|..++.|.. .....-.|.|.++| .|
T Consensus 16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~-----~~~~ki~C~C~~~~~~~~~~G 90 (105)
T 1n1i_A 16 TNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTM-----DDKKEVECKCTKEGSEPLFEG 90 (105)
T ss_dssp SCCCTTEEEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEE-----CTTSCEEEECCSTTCCEEGGG
T ss_pred CCCCCCCCeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEE-----CCCCEEEeECCCCCCccccce
Confidence 357788999987779999999999985 46776655 54 23666667765 22244789999985 46
Q ss_pred CCCCc
Q psy6570 666 VRCQT 670 (713)
Q Consensus 666 ~~C~~ 670 (713)
..|+.
T Consensus 91 vfC~~ 95 (105)
T 1n1i_A 91 VFCSS 95 (105)
T ss_dssp TEECC
T ss_pred EEECC
Confidence 66644
No 336
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.25 E-value=2.4 Score=42.82 Aligned_cols=152 Identities=12% Similarity=0.101 Sum_probs=83.3
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
....|++.+.+..|+ +-. ..+.|.+.++.... ...+. ........|++.|...+|+.... .. .|...++.+.
T Consensus 78 ~V~~~~~~~~~~~l~-s~s---~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~-d~-~i~~wd~~~~ 150 (343)
T 2xzm_R 78 FVSDLALSQENCFAI-SSS---WDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGA-ER-EIKLWNILGE 150 (343)
T ss_dssp CEEEEEECSSTTEEE-EEE---TTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEET-TS-CEEEEESSSC
T ss_pred ceEEEEECCCCCEEE-EEc---CCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcC-CC-EEEEEeccCC
Confidence 356788887654444 544 56789888886443 33333 33356788999986655554443 23 5777777643
Q ss_pred CcEEEEe--CCCCCCeeEEEeCCCC---------eEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeE
Q psy6570 106 NKFNLVD--NNIQWPTGITIDYPSQ---------RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNL 173 (713)
Q Consensus 106 ~~~~l~~--~~~~~p~glavd~~~~---------~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~l 173 (713)
....+.. ........+++.+... .++++-...+.|...+..+.....+... ......+++. ++.+
T Consensus 151 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h---~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 151 CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAH---ESNVNHLSISPNGKY 227 (343)
T ss_dssp EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECC---SSCEEEEEECTTSSE
T ss_pred ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCc---cccceEEEECCCCCE
Confidence 3222211 1122345677776541 3444444567777777554333333221 1233455554 3445
Q ss_pred EEEeCCCCcEEEEcc
Q psy6570 174 YFSTYRTNNILKINK 188 (713)
Q Consensus 174 y~td~~~~~i~~~~~ 188 (713)
+++-...+.|...+.
T Consensus 228 l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 228 IATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEETTCEEEEEES
T ss_pred EEEEcCCCeEEEEEC
Confidence 555556667777765
No 337
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.25 E-value=2.9 Score=43.94 Aligned_cols=176 Identities=7% Similarity=-0.023 Sum_probs=93.7
Q ss_pred cCCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...++....... +. .......++++ .+.| ++-. ..+.|.+.+++.......+.........|+++
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~s~~---~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-- 208 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNII-ISGS---TDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-- 208 (445)
T ss_dssp TTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEE-EEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEE-EEEe---CCCeEEEEECCcCcEEEEECCCCCcEEEEEec--
Confidence 35666666665433221 22 22334556665 3444 4444 46889999987654443343333556677776
Q ss_pred CCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcc
Q psy6570 83 SGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYK 162 (713)
Q Consensus 83 ~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 162 (713)
.+.|+... ... .|...++........+.........++++ +..|+.+. ..+.|...++........... ....
T Consensus 209 ~~~l~s~s-~dg-~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~--~~~~ 281 (445)
T 2ovr_B 209 EKRVVSGS-RDA-TLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGA-YDFMVKVWDPETETCLHTLQG--HTNR 281 (445)
T ss_dssp TTEEEEEE-TTS-EEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEE-TTSCEEEEEGGGTEEEEEECC--CSSC
T ss_pred CCEEEEEe-CCC-EEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEc-CCCEEEEEECCCCcEeEEecC--CCCc
Confidence 33444433 333 78888877555444444444555677774 44555444 466787777754432222221 1223
Q ss_pred ceeeeeeCCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 163 PYKLEVFEDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 163 p~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
...+++++..|+ +....+.|..++...+.....
T Consensus 282 v~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 282 VYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp EEEEEECSSEEE-EEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEECCCEEE-EEeCCCeEEEEECCCCCEEEE
Confidence 455666555444 444566777777655544333
No 338
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.24 E-value=2.7 Score=44.40 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=83.6
Q ss_pred EEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEE
Q psy6570 32 AVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLV 111 (713)
Q Consensus 32 a~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~ 111 (713)
++.+.++.|+... ..+.|.+.++........+.........+++++....|+... ... .|...++........+
T Consensus 275 ~~~~~~~~l~~~~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~-~dg-~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 275 TVSGHGNIVVSGS----YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS-MDT-TIRIWDLENGELMYTL 348 (464)
T ss_dssp EEEEETTEEEEEE----TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE-TTS-CEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEe----CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe-CCC-cEEEEECCCCcEEEEE
Confidence 3444455555544 367889999876544444433346678899998655555544 333 6888887644433333
Q ss_pred eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccCC
Q psy6570 112 DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 112 ~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~ 191 (713)
.........|+++ ..+|+ +-...+.|...++....+....... .......+..++..|.... .+.|..++...+
T Consensus 349 ~~h~~~v~~~~~~--~~~l~-s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g 422 (464)
T 3v7d_B 349 QGHTALVGLLRLS--DKFLV-SAAADGSIRGWDANDYSRKFSYHHT-NLSAITTFYVSDNILVSGS--ENQFNIYNLRSG 422 (464)
T ss_dssp CCCSSCEEEEEEC--SSEEE-EEETTSEEEEEETTTCCEEEEEECT-TCCCEEEEEECSSEEEEEE--TTEEEEEETTTC
T ss_pred eCCCCcEEEEEEc--CCEEE-EEeCCCcEEEEECCCCceeeeecCC-CCccEEEEEeCCCEEEEec--CCeEEEEECCCC
Confidence 3344456677777 34444 4445677888888765443333221 1222233333344443333 567777776555
Q ss_pred Ccc
Q psy6570 192 SDF 194 (713)
Q Consensus 192 ~~~ 194 (713)
...
T Consensus 423 ~~~ 425 (464)
T 3v7d_B 423 KLV 425 (464)
T ss_dssp CEE
T ss_pred cEE
Confidence 443
No 339
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.24 E-value=2.4 Score=42.46 Aligned_cols=158 Identities=11% Similarity=0.079 Sum_probs=87.6
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
.....+++.+.+..|+ +-. ..+.|.+.++........+.........|++++... ++++-.... .|..-++.+.
T Consensus 66 ~~v~~~~~s~dg~~l~-s~s---~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~-~i~vwd~~~~ 139 (319)
T 3frx_A 66 HIVQDCTLTADGAYAL-SAS---WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDK-TIKVWTIKGQ 139 (319)
T ss_dssp SCEEEEEECTTSSEEE-EEE---TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTS-CEEEEETTSC
T ss_pred ccEEEEEECCCCCEEE-EEe---CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEECCCC
Confidence 3456788887655555 444 468899999865443333333345678899997544 444443333 6777777765
Q ss_pred CcEEEEeCCCCCCeeEEEeCCC-----CeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCC
Q psy6570 106 NKFNLVDNNIQWPTGITIDYPS-----QRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYR 179 (713)
Q Consensus 106 ~~~~l~~~~~~~p~glavd~~~-----~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~ 179 (713)
....+. ........+++.+.. +.++++-...+.|...++........+.. .......+++. ++.++++-..
T Consensus 140 ~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 140 CLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG--HNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp EEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC--CCSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC--CCCcEEEEEEcCCCCEEEEEeC
Confidence 444443 233345667776532 23455555667777777765433222221 11223445554 3445555555
Q ss_pred CCcEEEEcccCCC
Q psy6570 180 TNNILKINKFGNS 192 (713)
Q Consensus 180 ~~~i~~~~~~~~~ 192 (713)
.+.|...+...+.
T Consensus 217 dg~i~iwd~~~~~ 229 (319)
T 3frx_A 217 DGEIMLWNLAAKK 229 (319)
T ss_dssp TCEEEEEETTTTE
T ss_pred CCeEEEEECCCCc
Confidence 6677777665443
No 340
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.20 E-value=0.014 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=26.4
Q ss_pred CCCCCC--CCCCCCcEEeecCCCceee-CCCCCcCC
Q psy6570 552 ANKCTP--NYCSNNGTCVLIEGKPSCK-CLPPYSGK 584 (713)
Q Consensus 552 ~~~C~~--~~C~~~~~C~~~~g~~~C~-C~~G~~G~ 584 (713)
+++|.. .+|..+++|+|+.|+|+|. +..||.+.
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred cccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 678864 5698889999999999997 55688743
No 341
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.17 E-value=0.89 Score=47.84 Aligned_cols=159 Identities=9% Similarity=0.005 Sum_probs=88.8
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEE-------cCCCCCcceEEEcCCCCcEEEEccCCCCeE
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLL-------NTGLNEPYDIALEPLSGRMFWTELGIKPRI 97 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~-------~~~~~~p~~iavD~~~~~ly~td~~~~~~I 97 (713)
..+..|++.+.+..|+.+ . .+.|.+.+++ +.....++ ......+..|+++|....++++-.... .|
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-~i 251 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-D----DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-TI 251 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-C----SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-CE
T ss_pred cceEEEEEcCCCCEEEEe-C----CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-eE
Confidence 446789998865555433 3 5789999987 32222221 112345778999986635555543333 67
Q ss_pred EEEecCCCCc----EEEEeCCCC------------CCeeEEEeCCCCeEEEEcCCCCcEEEEeCC--CCceeEEEecCCC
Q psy6570 98 SGASIDGKNK----FNLVDNNIQ------------WPTGITIDYPSQRLYWADPKARTIESINLN--GKDRFVVYHTEDN 159 (713)
Q Consensus 98 ~~~~~dG~~~----~~l~~~~~~------------~p~glavd~~~~~LY~~d~~~~~I~~~~~~--g~~~~~~~~~~~~ 159 (713)
...++..... ...+..... ....|++++.+..|..+.. +.|...++. +.....+.....
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~- 328 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEY- 328 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGG-
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeecccc-
Confidence 8877765443 333332222 5688999987666666554 888888875 333333322110
Q ss_pred Ccc-------------ceeeeee-CCeEEEEeCCCCcEEEEcccCCCc
Q psy6570 160 GYK-------------PYKLEVF-EDNLYFSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 160 ~~~-------------p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~ 193 (713)
... .+.+++. ++.++++-...+.|..++...+..
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 000 1124443 233345555667777777655433
No 342
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.13 E-value=0.0064 Score=62.70 Aligned_cols=37 Identities=22% Similarity=0.584 Sum_probs=23.3
Q ss_pred CeecCCCCccCCCCCCccccCCCCCCcccCCCCccCCCCCCCCCCCCcEE
Q psy6570 470 PKCMCSPGYSGKKCDTCTCLNGDSGPKCMCSPGYSGKKCDTCTCLNGGTC 519 (713)
Q Consensus 470 ~~C~C~~G~~g~~C~~~~C~~~~~~~~C~C~~G~~g~~C~~~~C~~~g~C 519 (713)
+.|.|.+||.|..|+. |.+||.|..|....+.+...|
T Consensus 272 ~~C~C~~nt~G~~Ce~-------------C~~gy~~~p~~~g~~~~~~~C 308 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCEK-------------CLPFFNDRPWRRATAESASEC 308 (375)
T ss_dssp EEECCCTTEESTTSCE-------------ECTTCCSSCCCCCCSSCCCCC
T ss_pred eeeeCcCCCcCCCccc-------------CCCCCcCCCCCCCccCCCCCC
Confidence 4677777777777775 667777766554434333334
No 343
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.10 E-value=1.7 Score=43.41 Aligned_cols=122 Identities=7% Similarity=-0.028 Sum_probs=71.9
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-----EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEE
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-----KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISG 99 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-----~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~ 99 (713)
-.....|++.+..+.++++-. ..+.|.+.+++... ....+......+..|++.|...+|+... ... .|..
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s---~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-~d~-~i~~ 112 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSAS---RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-WDG-TLRL 112 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEE---TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTS-EEEE
T ss_pred cCCEEEEEEeCCCCCEEEEEc---CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-ccc-cceE
Confidence 344788999987777777766 56778877765422 1112222235678899997555555443 323 6777
Q ss_pred EecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeE
Q psy6570 100 ASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFV 152 (713)
Q Consensus 100 ~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~ 152 (713)
.+...................+.+.+....|+.+. ..+.|...++.+.....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS-RDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEEEECTTSCEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeec-CCCeEEEEEeCCCceEE
Confidence 77666555544444455556666666555555443 44556666665544433
No 344
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.09 E-value=0.015 Score=40.51 Aligned_cols=33 Identities=48% Similarity=1.167 Sum_probs=25.1
Q ss_pred CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCcc
Q psy6570 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTL 671 (713)
Q Consensus 634 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~ 671 (713)
..|.++ +|... .....+.|.|++||+|.+|+..
T Consensus 14 ~yC~nG-~C~~~----~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFL----VQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeec----cCCCCeEEECCCCCcccCCCce
Confidence 568875 99751 2234589999999999999874
No 345
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.06 E-value=0.0093 Score=41.68 Aligned_cols=34 Identities=38% Similarity=1.097 Sum_probs=25.6
Q ss_pred CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCccc
Q psy6570 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672 (713)
Q Consensus 634 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~ 672 (713)
+.|.+ |+|.. +.....+.|.|++||+|.+||...
T Consensus 14 ~yC~n-G~C~~----~~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 14 HYCIK-GRCRF----VVAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp TSCTT-CCEEE----ETTTTEEEECCCTTEETTTTCEEC
T ss_pred CcccC-CEEEe----EcCCCCeEEECCCCcccCCCCeec
Confidence 56888 78963 123345799999999999999754
No 346
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.06 E-value=1.8 Score=43.68 Aligned_cols=153 Identities=7% Similarity=-0.006 Sum_probs=87.7
Q ss_pred CCCCceEEEeccC--CeEEEeecCCCCCCeEEEEecCC--ceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEE
Q psy6570 25 LHDPRGVAVDWVG--KNLYWTDAGGRSSNNIMVSTLEG--RKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGA 100 (713)
Q Consensus 25 ~~~p~gla~D~~~--~~ly~td~~~~~~~~I~~~~~~G--~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~ 100 (713)
......|++.+.. +.++++-. ..+.|.+.+++. ......+.........|++.|...+|+... ... .|...
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg-~v~iw 113 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGS---WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-CDK-TAKMW 113 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEE---TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTS-EEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEEC---CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-CCC-cEEEE
Confidence 3456889998875 45555544 467888888874 333233333346788999998555555444 333 68888
Q ss_pred ecCCCCcEEEEeCCCCCCeeEEE--eCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeC
Q psy6570 101 SIDGKNKFNLVDNNIQWPTGITI--DYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178 (713)
Q Consensus 101 ~~dG~~~~~l~~~~~~~p~glav--d~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~ 178 (713)
+++......+.. .......|++ ++. +.++++-...+.|...++........... ......++.....++++..
T Consensus 114 d~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 114 DLSSNQAIQIAQ-HDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQL---PERCYCADVIYPMAVVATA 188 (368)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEEC---SSCEEEEEEETTEEEEEEG
T ss_pred EcCCCCceeecc-ccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEec---CCCceEEEecCCeeEEEeC
Confidence 887665544433 3445678888 644 44444544567788888755433333222 1234445555555544432
Q ss_pred CCCcEEEEcc
Q psy6570 179 RTNNILKINK 188 (713)
Q Consensus 179 ~~~~i~~~~~ 188 (713)
.+.+..++.
T Consensus 189 -~~~i~~~~~ 197 (368)
T 3mmy_A 189 -ERGLIVYQL 197 (368)
T ss_dssp -GGCEEEEEC
T ss_pred -CCcEEEEEe
Confidence 334444443
No 347
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.04 E-value=0.57 Score=53.20 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=85.2
Q ss_pred CceeEEEccCc---ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE---EEEEcCCCCCcceEEEc
Q psy6570 7 GNVTRVKREMN---LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK---RTLLNTGLNEPYDIALE 80 (713)
Q Consensus 7 ~~I~~~~~~~~---~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~---~~l~~~~~~~p~~iavD 80 (713)
..|+.+++++. .+.+......-... +++.++.||++-.......+|+++++++... +.++...-... .+.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s 334 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVH 334 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEE
Confidence 46677776543 22333322222222 5666788877643211357899999987543 55554432222 455
Q ss_pred CCCCcEEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC---CCCcEEEEeCCCCceeEEEec
Q psy6570 81 PLSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP---KARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 81 ~~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~---~~~~I~~~~~~g~~~~~~~~~ 156 (713)
+..+.|+++... ...+|++.+++|...+.+.........++++++.++.|+++-. ....|+.+++++...+++...
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECC
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeC
Confidence 556777776433 2347999999987655543222223345666667777877642 346899999987766666543
No 348
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.02 E-value=1.1 Score=49.76 Aligned_cols=156 Identities=12% Similarity=-0.022 Sum_probs=83.3
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKN 106 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~ 106 (713)
....++|.+.+..++++-. ..+.|.+.+.........+.........|++.|. +.++.+-.... .|..-++....
T Consensus 149 ~v~~v~f~p~~~~~l~s~s---~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd-g~~las~s~D~-~i~lwd~~~g~ 223 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGS---DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD-GSLFASTGGDG-TIVLYNGVDGT 223 (611)
T ss_dssp CEEEEEECSSSSCEEEEEE---TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT-SSEEEEEETTS-CEEEEETTTCC
T ss_pred CceEEEECCCCCeEEEEEe---CCCeEEEEECCCCeEeeeeccccCceEEEEECCC-CCEEEEEECCC-cEEEEECCCCc
Confidence 3567888776655555655 5677888886543333333333456789999985 55555544433 67766654333
Q ss_pred cEEEE-e------CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEEecCCCCccceeeeeeCCeEEEEeC
Q psy6570 107 KFNLV-D------NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVYHTEDNGYKPYKLEVFEDNLYFSTY 178 (713)
Q Consensus 107 ~~~l~-~------~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~~~p~~i~~~~~~ly~td~ 178 (713)
....+ . ........|++++.+.+|..+ ...+.|...++.... ...+...........++...+. .+++-.
T Consensus 224 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~-s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s 301 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ-ALVSIS 301 (611)
T ss_dssp EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS-CEEEEE
T ss_pred EeeeeccccccccccCCCEEEEEECCCCCEEEEE-eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC-EEEEEe
Confidence 32222 1 123456789999866666544 455677777775433 2222211111112233444333 334434
Q ss_pred CCCcEEEEccc
Q psy6570 179 RTNNILKINKF 189 (713)
Q Consensus 179 ~~~~i~~~~~~ 189 (713)
..+.|..++..
T Consensus 302 ~d~~i~~~~~~ 312 (611)
T 1nr0_A 302 ANGFINFVNPE 312 (611)
T ss_dssp TTCCEEEEETT
T ss_pred CCCcEEEEeCC
Confidence 45555555543
No 349
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.02 E-value=2.4 Score=44.54 Aligned_cols=170 Identities=8% Similarity=-0.037 Sum_probs=88.9
Q ss_pred cCCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEE---EEEcCCCCCcceEEE
Q psy6570 5 SSGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR---TLLNTGLNEPYDIAL 79 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~---~l~~~~~~~p~~iav 79 (713)
.++.|...++.....+. +. .......|++ ..+.|+ +-. ..+.|.+.++...... ............|++
T Consensus 191 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMV-TCS---KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp TTSCEEEEESSSCCEEEEECCCCSCEEEEEC--CTTEEE-EEE---TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcEEEEEE--cCCEEE-Eee---CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 35666666766543221 21 2222344444 344444 444 4678888887654322 222222345566777
Q ss_pred cCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 80 EPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 80 D~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
| ...|+... ... .|...++........+.........++++ +..| ++-...+.|...++........... .
T Consensus 265 ~--~~~l~s~~-~dg-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~--h 335 (435)
T 1p22_A 265 D--DKYIVSAS-GDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEG--H 335 (435)
T ss_dssp E--TTEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTCCEEEEECC--C
T ss_pred C--CCEEEEEe-CCC-eEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEE-EEEeCCCeEEEEECCCCCEEEEEeC--C
Confidence 4 34444443 333 78888877655444444444455667776 4444 4444567788888764433222222 1
Q ss_pred CccceeeeeeCCeEEEEeCCCCcEEEEcccC
Q psy6570 160 GYKPYKLEVFEDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 160 ~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~ 190 (713)
......+++++.. +++....+.|..++...
T Consensus 336 ~~~v~~~~~~~~~-l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 336 EELVRCIRFDNKR-IVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp SSCEEEEECCSSE-EEEEETTSCEEEEEHHH
T ss_pred cCcEEEEEecCCE-EEEEeCCCcEEEEECCC
Confidence 2234556664444 44445567777777543
No 350
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.96 E-value=1.4 Score=44.21 Aligned_cols=153 Identities=10% Similarity=-0.051 Sum_probs=76.9
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC-CCCcceEEEcCCCCc-EEEEccCCCCeEEEEecCCC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG-LNEPYDIALEPLSGR-MFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~-~~~p~~iavD~~~~~-ly~td~~~~~~I~~~~~dG~ 105 (713)
...+.+.+....|+.. . ..+.|.+.++.+.....+.... ......+++.+.... ++++-.... .|...++...
T Consensus 131 ~~~~~~~~~~~~l~s~-s---~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~-~i~i~d~~~~ 205 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSG-S---RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK-LVKVWNLANC 205 (340)
T ss_dssp EEEEEECTTSSCEEEE-E---TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS-CEEEEETTTT
T ss_pred eeEEEEeecCccceee-c---CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC-EEEEEECCCC
Confidence 3444444444444333 3 3456667776665544433222 234556676654443 444433323 6777777655
Q ss_pred CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEE
Q psy6570 106 NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILK 185 (713)
Q Consensus 106 ~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~ 185 (713)
.....+.........|++++.+..|+.+ ...+.|...++........... ......+.+..+..+++....+.|..
T Consensus 206 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~d~~i~i 281 (340)
T 4aow_A 206 KLKTNHIGHTGYLNTVTVSPDGSLCASG-GKDGQAMLWDLNEGKHLYTLDG---GDIINALCFSPNRYWLCAATGPSIKI 281 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTTEEEEEEEC---SSCEEEEEECSSSSEEEEEETTEEEE
T ss_pred ceeeEecCCCCcEEEEEECCCCCEEEEE-eCCCeEEEEEeccCceeeeecC---CceEEeeecCCCCceeeccCCCEEEE
Confidence 4444443334456789999766555544 4556787777765443333322 11223344433323333334455655
Q ss_pred Eccc
Q psy6570 186 INKF 189 (713)
Q Consensus 186 ~~~~ 189 (713)
.+..
T Consensus 282 wd~~ 285 (340)
T 4aow_A 282 WDLE 285 (340)
T ss_dssp EETT
T ss_pred EECC
Confidence 5544
No 351
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.91 E-value=0.99 Score=45.09 Aligned_cols=116 Identities=10% Similarity=-0.002 Sum_probs=60.0
Q ss_pred CCCCceEEEecc--CCeEEEeecCCCCCCeEEEEecCCceE-EEE------Ec------CCCCCcceEEEcCC---CCcE
Q psy6570 25 LHDPRGVAVDWV--GKNLYWTDAGGRSSNNIMVSTLEGRKK-RTL------LN------TGLNEPYDIALEPL---SGRM 86 (713)
Q Consensus 25 ~~~p~gla~D~~--~~~ly~td~~~~~~~~I~~~~~~G~~~-~~l------~~------~~~~~p~~iavD~~---~~~l 86 (713)
...+..|++.+. +..|+.+. ..+.|.+.++..... ..+ .. ........+++.|. ...|
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLG----NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEE----TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred CCceeEEEEcCCCCCcEEEEec----CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEE
Confidence 344677888876 55555444 467888888654321 110 00 12345667888875 4444
Q ss_pred EEEccCCCCeEEEEecCCCCcEEEEe--CCCCCCeeEEEeCCCC---eEEEEcCCCCcEEEEeCC
Q psy6570 87 FWTELGIKPRISGASIDGKNKFNLVD--NNIQWPTGITIDYPSQ---RLYWADPKARTIESINLN 146 (713)
Q Consensus 87 y~td~~~~~~I~~~~~dG~~~~~l~~--~~~~~p~glavd~~~~---~LY~~d~~~~~I~~~~~~ 146 (713)
+.+.. .. .+............+.. ........|++++... .++++-...+.|...++.
T Consensus 186 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 186 AVSAL-EQ-AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EEEET-TE-EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred EEecC-CC-cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 44443 23 33333333222222222 2234567899997652 455554455666666554
No 352
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.91 E-value=0.027 Score=39.26 Aligned_cols=32 Identities=31% Similarity=0.848 Sum_probs=24.7
Q ss_pred CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCc
Q psy6570 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQT 670 (713)
Q Consensus 634 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~ 670 (713)
+.|.+ |+|.. +.....+.|.|+.||+|++|+.
T Consensus 18 ~yC~n-G~C~~----i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKY----IEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEE----ETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEE----ecCCCCeeEECCCCcccccccc
Confidence 67887 59973 1234457999999999999986
No 353
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=94.88 E-value=0.0065 Score=59.39 Aligned_cols=38 Identities=26% Similarity=0.732 Sum_probs=27.1
Q ss_pred CCCCC--CCCCCCCcEEeecCCCceeeCCCCCc--CCCCCcC
Q psy6570 552 ANKCT--PNYCSNNGTCVLIEGKPSCKCLPPYS--GKQCTER 589 (713)
Q Consensus 552 ~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~--G~~C~~~ 589 (713)
+++|. ..+|+.++.|+|+.|+|.|.|++||. |..|.+.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~ 46 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAE 46 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEET
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCC
Confidence 66776 45788888888888888888888887 4456553
No 354
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.85 E-value=1.7 Score=44.00 Aligned_cols=115 Identities=5% Similarity=-0.112 Sum_probs=72.7
Q ss_pred CCCceEEEec--cCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC-CCCcceEEEcCCCCcEEEEccCCCCeEEEEec
Q psy6570 26 HDPRGVAVDW--VGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG-LNEPYDIALEPLSGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 26 ~~p~gla~D~--~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~-~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~ 102 (713)
.....|++.+ . +.++++-. ..+.|.+.++.......+.... ......+++.|. +.++.+-.... .|...++
T Consensus 126 ~~v~~~~~~~~~~-~~~l~s~s---~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg-~i~iwd~ 199 (343)
T 3lrv_A 126 NEIIYMYGHNEVN-TEYFIWAD---NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDG-ILDVYNL 199 (343)
T ss_dssp SCEEEEECCC----CCEEEEEE---TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEECTTS-CEEEEES
T ss_pred CCEEEEEcCCCCC-CCEEEEEe---CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEEcCCC-EEEEEEC
Confidence 3467788877 4 44445544 5678999998765554333222 235788999974 55555533333 6888887
Q ss_pred CCCCcE-EEEeC-CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 103 DGKNKF-NLVDN-NIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 103 dG~~~~-~l~~~-~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
...... ..+.. .......|++++.+.+|..+.. +.|...++...
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~~v~iwd~~~~ 245 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD--QTVVCFDLRKD 245 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES--SBEEEEETTSS
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--CeEEEEEcCCC
Confidence 755543 33333 3456789999987777777763 38888887654
No 355
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.84 E-value=0.64 Score=43.80 Aligned_cols=113 Identities=13% Similarity=0.026 Sum_probs=69.0
Q ss_pred EEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC-------CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC
Q psy6570 64 RTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG-------KNKFNLVDNNIQWPTGITIDYPSQRLYWADPK 136 (713)
Q Consensus 64 ~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG-------~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~ 136 (713)
+.+...++.....||++| ++.||.... +.|++.++.. ...+.|-....+.-..|.+| .++.||.+ .
T Consensus 33 ~~iG~~gw~~~~~laf~P-~G~LYaV~~---G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav--~ 105 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSP-GGELYGVLN---DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV--S 105 (236)
T ss_dssp EEEESSSCTTCSEEEECT-TSCEEEEET---TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE--E
T ss_pred cccCccccccceeEEECC-CccEEEEeC---CeEEEECCCCCCcccccccccEecccccccceEEEEC-CCCCEEEe--C
Confidence 344544577888999999 999999932 2799988743 12233433344445789999 57899998 3
Q ss_pred CCcEEEEeC--CCCc-----eeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEc
Q psy6570 137 ARTIESINL--NGKD-----RFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKIN 187 (713)
Q Consensus 137 ~~~I~~~~~--~g~~-----~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~ 187 (713)
.++|+|.+. ++.. -.+|... ....-..|.++ ++.||-+. ++.+++-.
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~--gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSG--GWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECS--SGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred CCEEEEeCCCcCCCCceeccccEeccC--CCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 389999986 3322 1222221 12222444444 66777776 45565543
No 356
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.80 E-value=2.4 Score=42.99 Aligned_cols=115 Identities=9% Similarity=0.013 Sum_probs=65.6
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE--EEEEcC-CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK--RTLLNT-GLNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~--~~l~~~-~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
....|++.+.+..|. +-. ..+.|.+.++++... +.++.. .......|++.|...+|+...... .|..-+++
T Consensus 18 ~v~~l~~sp~g~~la-s~~---~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--~v~iw~~~ 91 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLA-SCG---GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--TTCIWKKN 91 (345)
T ss_dssp CEEEEEECTTSSCEE-EEE---TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--CEEEEEEC
T ss_pred cEEEEEECCCCCEEE-EEc---CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--cEEEEEcc
Confidence 446789988766555 444 467788888766532 222222 235678899998655555544332 34444444
Q ss_pred CCCcE--EEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 104 GKNKF--NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 104 G~~~~--~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
....+ ..+.........|++.+.+.+|..+. ..+.|...+++..
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-RDKSVWVWEVDEE 137 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECTT
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-CCCeEEEEECCCC
Confidence 33322 22233344568899998666555544 4556666666543
No 357
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.78 E-value=0.46 Score=54.45 Aligned_cols=145 Identities=15% Similarity=0.224 Sum_probs=85.3
Q ss_pred CCceeEEEccCc----ccEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC--ceEEEEEcCCCCCcceEEE
Q psy6570 6 SGNVTRVKREMN----LKTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG--RKKRTLLNTGLNEPYDIAL 79 (713)
Q Consensus 6 ~~~I~~~~~~~~----~~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G--~~~~~l~~~~~~~p~~iav 79 (713)
...|+.+++++. .+.+.......... +++.++.||+.-.......+|++.++++ ...+.++...-....++++
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE
Confidence 346777777653 23333333333333 3467788887643222357799999987 3445555443233445666
Q ss_pred cCCCCcEEEEccC-CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEc---CCCCcEEEEeCCCCceeEE
Q psy6570 80 EPLSGRMFWTELG-IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWAD---PKARTIESINLNGKDRFVV 153 (713)
Q Consensus 80 D~~~~~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d---~~~~~I~~~~~~g~~~~~~ 153 (713)
+ ++.|+++... ...+|++.+++|+..+.+.........+++++++++.|+++- ....+|+.+++++...+++
T Consensus 372 ~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 372 A--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp E--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred E--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 5 6677776432 234788888887644444221233456788887777777653 2346799999877655444
No 358
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.70 E-value=0.92 Score=52.26 Aligned_cols=152 Identities=9% Similarity=-0.023 Sum_probs=89.9
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC--CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT--GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~--~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG 104 (713)
.+.+|+.|. .+.||+.-. .+.|.+++.+....+.+... ....+..|+.|+ ++.||+... . .|.+++.+.
T Consensus 408 ~v~~i~~d~-~g~lWigt~----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~-Gl~~~~~~~ 478 (781)
T 3v9f_A 408 SVLCSLKDS-EGNLWFGTY----LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--A-GVFVIDLAS 478 (781)
T ss_dssp BEEEEEECT-TSCEEEEET----TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET--T-EEEEEESSS
T ss_pred ceEEEEECC-CCCEEEEec----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--C-ceEEEeCCC
Confidence 356677774 467776543 35688888765443333221 234677899985 677877654 3 688988876
Q ss_pred CCcEEEEeCC-----CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCc--cceeeeee-CCeEEEE
Q psy6570 105 KNKFNLVDNN-----IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGY--KPYKLEVF-EDNLYFS 176 (713)
Q Consensus 105 ~~~~~l~~~~-----~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~--~p~~i~~~-~~~ly~t 176 (713)
...+.+.... ...+..|+.| ..++|+++.... -|++++.++...+.+... ..+. ...+|..+ ++.||++
T Consensus 479 ~~~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 479 KKVIHHYDTSNSQLLENFVRSIAQD-SEGRFWIGTFGG-GVGIYTPDMQLVRKFNQY-EGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp SSCCEEECTTTSSCSCSCEEEEEEC-TTCCEEEEESSS-CEEEECTTCCEEEEECTT-TTCSCSCEEEEEECTTSCEEEE
T ss_pred CeEEecccCcccccccceeEEEEEc-CCCCEEEEEcCC-CEEEEeCCCCeEEEccCC-CCCCCCeeEEEEECCCCCEEEE
Confidence 5554443222 2456788888 467888776533 488888776554444321 1122 23456555 4567666
Q ss_pred eCCCCcEEEEcccCC
Q psy6570 177 TYRTNNILKINKFGN 191 (713)
Q Consensus 177 d~~~~~i~~~~~~~~ 191 (713)
.. .+.|.++++..+
T Consensus 556 T~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 556 TG-EGLVCFPSARNF 569 (781)
T ss_dssp ET-TEEEEESCTTTC
T ss_pred EC-CCceEEECCCCC
Confidence 54 333377765433
No 359
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.67 E-value=0.51 Score=48.71 Aligned_cols=176 Identities=12% Similarity=0.035 Sum_probs=91.4
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK 107 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~ 107 (713)
++.++|.+.+..|.++-.+ ..+.|.+.++........+.. -....+|++.|...+|..+. . . .+.+........
T Consensus 136 ~~~v~fSpDg~~la~as~~--~d~~i~iwd~~~~~~~~~~~~-~~~V~~v~fspdg~~l~s~s-~-~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSK--VPAIMRIIDPSDLTEKFEIET-RGEVKDLHFSTDGKVVAYIT-G-S-SLEVISTVTGSC 209 (365)
T ss_dssp EEEEEECTTSSCEEEEESC--SSCEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSSEEEEEC-S-S-CEEEEETTTCCE
T ss_pred EEEEEEcCCCCEEEEEECC--CCCEEEEeECCCCcEEEEeCC-CCceEEEEEccCCceEEecc-c-e-eEEEEEeccCcc
Confidence 4678999887777765431 356788888876554433333 35688999998655554443 2 2 455555433222
Q ss_pred E-EEEe-CCCCCCeeEEEeCCCCeEEEEcCCC-C--cEEEEeCCCCceeEEEe--cCCCCccceeeeee-CCeEEEEeCC
Q psy6570 108 F-NLVD-NNIQWPTGITIDYPSQRLYWADPKA-R--TIESINLNGKDRFVVYH--TEDNGYKPYKLEVF-EDNLYFSTYR 179 (713)
Q Consensus 108 ~-~l~~-~~~~~p~glavd~~~~~LY~~d~~~-~--~I~~~~~~g~~~~~~~~--~~~~~~~p~~i~~~-~~~ly~td~~ 179 (713)
. .... ..-.....+++.+.+..|..+.... . .|+..++.......+.. ..........|++. ++.++.+-..
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 2 2211 1122356789998777776654322 2 34555544333222211 11111223455554 3445555556
Q ss_pred CCcEEEEcccCCCcceee-eccccccccEEE
Q psy6570 180 TNNILKINKFGNSDFNVL-ANNLNRASDVLI 209 (713)
Q Consensus 180 ~~~i~~~~~~~~~~~~~~-~~~~~~~~~i~v 209 (713)
.+.|..++...+..+..+ ......+..+++
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEE
Confidence 677877776655444332 223333444443
No 360
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.65 E-value=0.84 Score=52.59 Aligned_cols=151 Identities=16% Similarity=0.060 Sum_probs=87.3
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC-----CCCcceEEEcCCCCcEEEEccCCCCeEEEE
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG-----LNEPYDIALEPLSGRMFWTELGIKPRISGA 100 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~-----~~~p~~iavD~~~~~ly~td~~~~~~I~~~ 100 (713)
..+..|+.|. .++||++-. ..|.++++++...+.+.... ...+..|+.|+ .|.|+++..+. .|.+.
T Consensus 450 ~~v~~i~~d~-~g~lwigt~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~--Gl~~~ 520 (781)
T 3v9f_A 450 LDVRVFYEDK-NKKIWIGTH-----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGG--GVGIY 520 (781)
T ss_dssp CCEEEEEECT-TSEEEEEET-----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESSS--CEEEE
T ss_pred CeEEEEEECC-CCCEEEEEC-----CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEEEEcCC--CEEEE
Confidence 3456777774 467766543 56888887764443333221 24677899995 67887776432 48888
Q ss_pred ecCCCCcEEEEeC-CC--CCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecC-CCCccceeeeee-CCeEEE
Q psy6570 101 SIDGKNKFNLVDN-NI--QWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTE-DNGYKPYKLEVF-EDNLYF 175 (713)
Q Consensus 101 ~~dG~~~~~l~~~-~~--~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~~~p~~i~~~-~~~ly~ 175 (713)
+.++...+.+... .+ .....|+.| ..++||++.. .+-|.+++......+.+.... .......+|..+ +++||+
T Consensus 521 ~~~~~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~ 598 (781)
T 3v9f_A 521 TPDMQLVRKFNQYEGFCSNTINQIYRS-SKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWA 598 (781)
T ss_dssp CTTCCEEEEECTTTTCSCSCEEEEEEC-TTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred eCCCCeEEEccCCCCCCCCeeEEEEEC-CCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEE
Confidence 8766543333211 12 234677788 4677887765 443388777655444443221 111223566666 567777
Q ss_pred EeCCCCcEEEEccc
Q psy6570 176 STYRTNNILKINKF 189 (713)
Q Consensus 176 td~~~~~i~~~~~~ 189 (713)
+. .+.|.++++.
T Consensus 599 ~t--~~Gl~~~~~~ 610 (781)
T 3v9f_A 599 ST--NTGISCYITS 610 (781)
T ss_dssp EC--SSCEEEEETT
T ss_pred Ec--CCceEEEECC
Confidence 64 3457777764
No 361
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.63 E-value=0.014 Score=63.84 Aligned_cols=37 Identities=35% Similarity=0.723 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCcEEee-cCCCceeeCC-CCCcCCCCCc
Q psy6570 552 ANKCTPNYCSNNGTCVL-IEGKPSCKCL-PPYSGKQCTE 588 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~C~~ 588 (713)
+++|.++||.++|+|.+ ..++|+|.|. +||+|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 46899999999999999 7889999999 9999999986
No 362
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.58 E-value=1.6 Score=45.79 Aligned_cols=156 Identities=8% Similarity=0.022 Sum_probs=85.7
Q ss_pred CeEEEeecCCCCCCeEEEEecCCceEEEEEcC--CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEe-CC
Q psy6570 38 KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT--GLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVD-NN 114 (713)
Q Consensus 38 ~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~--~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~ 114 (713)
+.++++-. ..+.|.+.++........+.. ....+..|+++|...+|+..... . .|...++........+. ..
T Consensus 182 ~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g-~i~iwd~~~~~~~~~~~~~~ 256 (437)
T 3gre_A 182 KSLLVALT---NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-G-IIDIWDIRFNVLIRSWSFGD 256 (437)
T ss_dssp CEEEEEEE---TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-S-CEEEEETTTTEEEEEEBCTT
T ss_pred CCEEEEEe---CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-C-eEEEEEcCCccEEEEEecCC
Confidence 34444444 468899999865444333332 23578899999865555544432 3 57777776433222222 22
Q ss_pred CCCCeeEEEeCC---CCeEEEEcCCCCcEEEEeCCCCc-eeEEEecCC-----------------------CCccceeee
Q psy6570 115 IQWPTGITIDYP---SQRLYWADPKARTIESINLNGKD-RFVVYHTED-----------------------NGYKPYKLE 167 (713)
Q Consensus 115 ~~~p~glavd~~---~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~~-----------------------~~~~p~~i~ 167 (713)
......|++.+. +++++++-...+.|...++.... ...+..... .......|+
T Consensus 257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 257 HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 223456655542 34455555566778888876433 333321110 001123455
Q ss_pred eeCCeEEEEeCCCCcEEEEcccCCCcceeee
Q psy6570 168 VFEDNLYFSTYRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 168 ~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~ 198 (713)
+.++.++++....+.|...+...+.....+.
T Consensus 337 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 337 VSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred ECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 5556677777677888888876665555444
No 363
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.52 E-value=1.3 Score=50.23 Aligned_cols=178 Identities=8% Similarity=0.009 Sum_probs=99.3
Q ss_pred CceeEEEccCcccEEecCCCCC--ceEEEeccCCeEEEeecCCC---------CCCeEEEEecCCce--EEEEEcCC--C
Q psy6570 7 GNVTRVKREMNLKTVLSNLHDP--RGVAVDWVGKNLYWTDAGGR---------SSNNIMVSTLEGRK--KRTLLNTG--L 71 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~~~~~~~p--~gla~D~~~~~ly~td~~~~---------~~~~I~~~~~~G~~--~~~l~~~~--~ 71 (713)
..|+.+++.+...+....+... .++++.+.+..||++..... ...+|++.++.+.. .+.+.... .
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred EEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 4577777776543201122222 67888888888887764210 13459999987654 23343322 1
Q ss_pred CCcceEEEcCCCCcEEEEccCC--CCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC---CCCcEEEEeCC
Q psy6570 72 NEPYDIALEPLSGRMFWTELGI--KPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP---KARTIESINLN 146 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~--~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~---~~~~I~~~~~~ 146 (713)
....++++.|..++|+++.... ...|+..+..+...+.|... .......+. +.++ ||+... ...+|++++++
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG-VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC-SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC-CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 2345788998888887765332 23788877655555555542 222233333 3455 666532 45789999997
Q ss_pred CCce---eEEEecCCCCccceeeeeeCCeEEEEeCC--CCcEEEEcc
Q psy6570 147 GKDR---FVVYHTEDNGYKPYKLEVFEDNLYFSTYR--TNNILKINK 188 (713)
Q Consensus 147 g~~~---~~~~~~~~~~~~p~~i~~~~~~ly~td~~--~~~i~~~~~ 188 (713)
+... +.+..... .....++++.+++|+++... ..+|+.++.
T Consensus 304 ~~~~~~~~~l~~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 304 KPARASWKEIVPEDS-SASLLSVSIVGGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp BCSGGGCEEEECCCS-SCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred CCCccCCeEEecCCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 6542 44443211 11234566667777776543 334555554
No 364
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=94.45 E-value=0.016 Score=42.29 Aligned_cols=22 Identities=23% Similarity=0.683 Sum_probs=19.9
Q ss_pred CCCCCCeeeccC-CCceeeeCCCCc
Q psy6570 227 PCHQSALCINLP-SSHTCLCPDHLT 250 (713)
Q Consensus 227 ~C~~~~~C~~~~-g~~~C~C~~G~~ 250 (713)
.| .+.|++++ |+|+|.|++||.
T Consensus 8 gC--~~~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 8 RC--EQFCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp GC--SSEEEECSTTCEEEECCTTEE
T ss_pred Cc--CCEeEeCCCCCEEeeCCCCcE
Confidence 46 78999999 699999999998
No 365
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.35 E-value=6.1 Score=41.59 Aligned_cols=184 Identities=6% Similarity=-0.100 Sum_probs=91.2
Q ss_pred cCCceeEEEccCcccEE-ec-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCC
Q psy6570 5 SSGNVTRVKREMNLKTV-LS-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPL 82 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~-~~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~ 82 (713)
.++.|...++.....+. +. ....+..|++.+. + ++++-. ..+.|.+.+++.......+.........|++.+.
T Consensus 140 ~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s---~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 214 (464)
T 3v7d_B 140 DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-G-ILVSGS---TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEY 214 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECST-T-EEEEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEES
T ss_pred CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC-C-EEEEEe---CCCCEEEEECCCCcEEEEECCCCCccEEEEEecC
Confidence 45667777765543221 22 3334566777644 3 444444 5788999998765544444333456677888752
Q ss_pred -CCcEEEEccCCCCeEEEEecCCCCcEEE---------------------EeCCCCCCeeEEEeCCCCeEEEEcCCCCcE
Q psy6570 83 -SGRMFWTELGIKPRISGASIDGKNKFNL---------------------VDNNIQWPTGITIDYPSQRLYWADPKARTI 140 (713)
Q Consensus 83 -~~~ly~td~~~~~~I~~~~~dG~~~~~l---------------------~~~~~~~p~glavd~~~~~LY~~d~~~~~I 140 (713)
++.++++-.... .|...++........ .....+...-.++++....|+.+. ..+.|
T Consensus 215 ~~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i 292 (464)
T 3v7d_B 215 KNIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS-YDNTL 292 (464)
T ss_dssp SSCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE-TTSCE
T ss_pred CCCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe-CCCeE
Confidence 334444443333 566666654332111 000111112233443355555544 45678
Q ss_pred EEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 141 ~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
...++........... .......+++. ++.++++....+.|..++...+.....+
T Consensus 293 ~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 293 IVWDVAQMKCLYILSG--HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp EEEETTTTEEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEecC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 8888754433222221 12233445554 2334445455667777776555444333
No 366
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.34 E-value=5.1 Score=40.68 Aligned_cols=165 Identities=8% Similarity=-0.009 Sum_probs=90.2
Q ss_pred CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 24 NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 24 ~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
.......|++.+.+..|+ +-. ..+.|.+.+.........+.........+++.|....| .+-.... .|...++.
T Consensus 63 H~~~V~~~~~s~d~~~l~-s~s---~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-asg~~d~-~i~v~~~~ 136 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIV-SSS---QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI-ACGGLDN-KCSVYPLT 136 (354)
T ss_dssp CSSCEEEEEECTTSSEEE-EEE---TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEE-EEESTTS-EEEEEECC
T ss_pred CCCeEEEEEECCCCCEEE-EEe---CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEE-EEeeCCC-CEEEEEEe
Confidence 344567888887655554 544 57788888865544443333444667889999855444 4433333 55555543
Q ss_pred CC------CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeee--e-CCeEE
Q psy6570 104 GK------NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEV--F-EDNLY 174 (713)
Q Consensus 104 G~------~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~--~-~~~ly 174 (713)
.. .....+.........+++.+...+|+.+. ..+.|...++........+... ......+++ . .+.++
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s-~D~~v~lwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS-GDGTCALWDVESGQLLQSFHGH--GADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEECC--SSCEEEEEECCCSSCCEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEcCC--CCCeEEEEEEeCCCCCEE
Confidence 21 11122222344567888887666666543 4567777777544332222221 112233443 2 23566
Q ss_pred EEeCCCCcEEEEcccCCCcceee
Q psy6570 175 FSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 175 ~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
++-...+.|...+...+.....+
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~ 236 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAF 236 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEe
Confidence 66666677877776555443333
No 367
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.33 E-value=3 Score=46.27 Aligned_cols=160 Identities=11% Similarity=0.008 Sum_probs=87.7
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecC-Cce-EEEEEcCCCCCcceEEEcCCCCcEEEEccCCC--CeEEEEe
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIK--PRISGAS 101 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~-~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~--~~I~~~~ 101 (713)
.....+++.+.+..|. +-. ..+.|.+.++. ++. ....+.........|+++|...+|..+..+.. .+|+..+
T Consensus 60 ~~v~~~~~spdg~~la-sg~---~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCA-SGD---VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp SCEEEEEECTTSSEEE-EEE---TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred CceEEEEECCCCcEEE-EEe---CCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee
Confidence 3457789988765554 433 46788888874 222 22222222356789999987776766554322 1344433
Q ss_pred cCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCC
Q psy6570 102 IDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRT 180 (713)
Q Consensus 102 ~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~ 180 (713)
. |+...++ .........+++.|....++++-...+.|...+.........+.. .......+++. ++.++.+-...
T Consensus 136 ~-~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~--H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 136 T-GTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE--HTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp T-CCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC--CSSCEEEEEECTTSSEEEEEETT
T ss_pred C-CCCccee-cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc--ccCceEEEEECCCCCEEEEEECC
Confidence 2 2222222 223445678999987765556655666777766543322222221 12233455554 44566666666
Q ss_pred CcEEEEcccCCCc
Q psy6570 181 NNILKINKFGNSD 193 (713)
Q Consensus 181 ~~i~~~~~~~~~~ 193 (713)
+.|+..+...+..
T Consensus 212 ~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 212 GTIVLYNGVDGTK 224 (611)
T ss_dssp SCEEEEETTTCCE
T ss_pred CcEEEEECCCCcE
Confidence 7777777544443
No 368
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.27 E-value=0.015 Score=41.41 Aligned_cols=23 Identities=17% Similarity=0.613 Sum_probs=20.5
Q ss_pred CCCCCCeeeccCC-CceeeeCCCCcc
Q psy6570 227 PCHQSALCINLPS-SHTCLCPDHLTE 251 (713)
Q Consensus 227 ~C~~~~~C~~~~g-~~~C~C~~G~~~ 251 (713)
.| .+.|+++++ +|+|.|++||..
T Consensus 8 gC--~~~C~n~~ggs~~C~C~~Gy~L 31 (53)
T 2bz6_L 8 GC--EQYCSDHTGTKRSCRCHEGYSL 31 (53)
T ss_dssp GC--SSEEEEETTTEEEEECCTTEEE
T ss_pred Cc--CCEeEcCCCCCEEeeCCCCCEE
Confidence 46 789999999 799999999983
No 369
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.24 E-value=1.3 Score=50.81 Aligned_cols=183 Identities=8% Similarity=0.009 Sum_probs=96.6
Q ss_pred cCCceeEEEccCcc-cEE--ec-CCCCCceEEEeccC-CeEEEeecCCCCCCeEEEEecCCceE--EEEEcCCCCCcceE
Q psy6570 5 SSGNVTRVKREMNL-KTV--LS-NLHDPRGVAVDWVG-KNLYWTDAGGRSSNNIMVSTLEGRKK--RTLLNTGLNEPYDI 77 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~--~~-~~~~p~gla~D~~~-~~ly~td~~~~~~~~I~~~~~~G~~~--~~l~~~~~~~p~~i 77 (713)
.++.|...++.+.. +.+ +. .......|++.+.. +.++++-. ..+.|.+.++++... .............|
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s---~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS---YDGKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE---TTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe---CCCeEEEEECCCCcccccccccCCCCCeEEE
Confidence 35566666665322 111 22 22345677776541 34444444 467888888876542 22222334567889
Q ss_pred EEcCCC-CcEEEEccCCCCeEEEEecCCC--CcEEEEeCCCCCCeeEEEeCC------------CCeEEEEcCCCCcEEE
Q psy6570 78 ALEPLS-GRMFWTELGIKPRISGASIDGK--NKFNLVDNNIQWPTGITIDYP------------SQRLYWADPKARTIES 142 (713)
Q Consensus 78 avD~~~-~~ly~td~~~~~~I~~~~~dG~--~~~~l~~~~~~~p~glavd~~------------~~~LY~~d~~~~~I~~ 142 (713)
++.|.. +.++++-.... .|...++... .....+.........|++++. ++.++++-...+.|..
T Consensus 106 ~~sp~~~~~~l~sgs~dg-~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~i 184 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDG-KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKI 184 (753)
T ss_dssp EECCGGGCSEEEEEETTS-EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEE
T ss_pred EECCCCCCCEEEEEeCCC-cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEE
Confidence 999862 44444443333 6777777654 223333344456678888874 2444444445666777
Q ss_pred EeCCCCce--eEEEecCCCCccceeeeee-C---CeEEEEeCCCCcEEEEcccCC
Q psy6570 143 INLNGKDR--FVVYHTEDNGYKPYKLEVF-E---DNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 143 ~~~~g~~~--~~~~~~~~~~~~p~~i~~~-~---~~ly~td~~~~~i~~~~~~~~ 191 (713)
.++..... ..+............+++. . +.++++-...+.|..++...+
T Consensus 185 wd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 185 WKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 76644321 2222211112233455554 2 455666556667777765543
No 370
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.22 E-value=0.037 Score=48.75 Aligned_cols=60 Identities=37% Similarity=0.778 Sum_probs=37.7
Q ss_pred CCCCCCCcEEcCC--CCCe-eccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEeecCC-CceeeCCCCCcCCC
Q psy6570 510 TCTCLNGGTCIPN--SKNN-VCKCPSQYTGRRCECAVGDTSCASLANKCTPNYCSNNGTCVLIEG-KPSCKCLPPYSGKQ 585 (713)
Q Consensus 510 ~~~C~~~g~C~~~--~~~~-~C~C~~g~~G~~C~~~~~~~~c~~~~~~C~~~~C~~~~~C~~~~g-~~~C~C~~G~~G~~ 585 (713)
.++|.|+|+|+.. ...+ +|.|++||.|..|+.+. + ..|....| .|+........|..
T Consensus 12 ~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~---------~----------~~C~~g~G~~YrG~~s~T~sG~~ 72 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK---------S----------KTCYEGNGHFYRGKASTDTMGRP 72 (145)
T ss_dssp CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES---------S----------CCEECTTCTTCCSCCCBBTTSCB
T ss_pred CCCCCCCCCcCCCccccCCccccCCCCCCCCceeccc---------c----------ccCCCCCccccccceecCCcCCc
Confidence 3478888888754 1234 78999999988888652 1 02333222 46666666666777
Q ss_pred CCc
Q psy6570 586 CTE 588 (713)
Q Consensus 586 C~~ 588 (713)
|+.
T Consensus 73 Cq~ 75 (145)
T 2i9a_A 73 CLP 75 (145)
T ss_dssp CCC
T ss_pred ccC
Confidence 764
No 371
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.21 E-value=0.041 Score=48.44 Aligned_cols=57 Identities=30% Similarity=0.691 Sum_probs=32.3
Q ss_pred CCCCCcEeccC--CCCc-cccCCCCCcCCCCccCCCCCCCCCCeeecCCC-CCeecCCCCccCCCCC
Q psy6570 422 KCQNGGVCVNK--TTGL-ECDCPKFYYGKNCQYSQCKNYCVNGECSITDS-GPKCMCSPGYSGKKCD 484 (713)
Q Consensus 422 ~C~~~~~C~~~--~~~~-~C~C~~G~~g~~C~~~~C~~~~~~~~C~~~~~-~~~C~C~~G~~g~~C~ 484 (713)
||.++|+|+.. ...+ .|.|++||.|..|+++... .|....| .|+........|..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~------~C~~g~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK------TCYEGNGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC------CEECTTCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc------cCCCCCccccccceecCCcCCccc
Confidence 57777777654 2334 6777777777777754321 3443333 2555555555555554
No 372
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=94.21 E-value=0.58 Score=53.57 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=70.0
Q ss_pred CceEEEeccCCeEE-EeecCCCCCCeEEEEecCCce-------EEEEEcC-C---CC--CcceEEEcCCCCcEE-EE-cc
Q psy6570 28 PRGVAVDWVGKNLY-WTDAGGRSSNNIMVSTLEGRK-------KRTLLNT-G---LN--EPYDIALEPLSGRMF-WT-EL 91 (713)
Q Consensus 28 p~gla~D~~~~~ly-~td~~~~~~~~I~~~~~~G~~-------~~~l~~~-~---~~--~p~~iavD~~~~~ly-~t-d~ 91 (713)
...+++-+.++.|+ +++.. .....|.+.++++.. ...++.. . +. .+..+++.|.+..|+ |. +.
T Consensus 262 ~~~~~wspdg~~~~~~~~r~-~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~ 340 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRI-QNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE 340 (740)
T ss_dssp EEEEEEEETTEEEEEEEESS-TTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT
T ss_pred EEEEEEeCCCeEEEEEeCCC-CCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC
Confidence 34566766655333 33331 123368888876543 2222211 1 11 145778887666665 54 33
Q ss_pred CCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC------CCcEEEEeCCCCcee
Q psy6570 92 GIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK------ARTIESINLNGKDRF 151 (713)
Q Consensus 92 ~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~------~~~I~~~~~~g~~~~ 151 (713)
.....|++.+++|...+.|.........-+.+| +++||++... ...|++++++|...+
T Consensus 341 ~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~ 404 (740)
T 4a5s_A 341 EGYRHICYFQIDKKDCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKV 404 (740)
T ss_dssp TSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEE
T ss_pred CCceEEEEEECCCCceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCCcc
Confidence 333489999999988776654332222224466 7888887543 357999999987654
No 373
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.20 E-value=0.53 Score=49.98 Aligned_cols=122 Identities=13% Similarity=0.016 Sum_probs=76.2
Q ss_pred CCceEEEeccCCeEEE---eecCCCCCCeEEEEecCCc------eE-----EEEEcCCCCCcceEEEcCCCCcEEEEccC
Q psy6570 27 DPRGVAVDWVGKNLYW---TDAGGRSSNNIMVSTLEGR------KK-----RTLLNTGLNEPYDIALEPLSGRMFWTELG 92 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~---td~~~~~~~~I~~~~~~G~------~~-----~~l~~~~~~~p~~iavD~~~~~ly~td~~ 92 (713)
.+..|++.+.+..|++ +-. ..+.|.+.+++.. .. ..+.......+.+|++.|..+.++.+-..
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSE---YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETT---TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred cccEEEEcCCCCEEEEEEeccC---CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 4778999988777876 433 4567888876532 11 11111113467889999876777776544
Q ss_pred CCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEE
Q psy6570 93 IKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVV 153 (713)
Q Consensus 93 ~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~ 153 (713)
.. .|...++..................|++++.+.+|+.+. ..+.|...++.+.....+
T Consensus 171 Dg-~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 171 DG-SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TS-CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred CC-eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccc
Confidence 44 677777765422211222234678999998877777665 567788888885544433
No 374
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.17 E-value=0.024 Score=61.95 Aligned_cols=36 Identities=33% Similarity=0.788 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCcEEee-cCCCceeeCC-CCCcCCCCCc
Q psy6570 553 NKCTPNYCSNNGTCVL-IEGKPSCKCL-PPYSGKQCTE 588 (713)
Q Consensus 553 ~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~C~~ 588 (713)
++|.++||.++|+|++ ..++|.|.|+ +||+|..|+.
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 6799999999999996 4588999999 9999999986
No 375
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.15 E-value=3 Score=42.24 Aligned_cols=176 Identities=14% Similarity=0.047 Sum_probs=90.3
Q ss_pred CCceeEEEccCccc---EEe-c-CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEE--EEEcCCCCCcceEE
Q psy6570 6 SGNVTRVKREMNLK---TVL-S-NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKR--TLLNTGLNEPYDIA 78 (713)
Q Consensus 6 ~~~I~~~~~~~~~~---~~~-~-~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~--~l~~~~~~~p~~ia 78 (713)
++.|...++.+... ... . .......|++.+.+..|+.+. ..+.|.+.+++....+ ..+.........|+
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s----~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS----FDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE----CCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 45555555554321 111 1 223467889988766665443 3566777766554322 22222235678899
Q ss_pred EcCCCCcEEEEccCCCCeEEEEecCCCCcEE---EEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEe
Q psy6570 79 LEPLSGRMFWTELGIKPRISGASIDGKNKFN---LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 79 vD~~~~~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~ 155 (713)
+.|... ++++-.... .|...+++...... .+.........|++.+....|..+. ..+.|...+........+..
T Consensus 113 ~sp~~~-~l~s~s~D~-~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~ 189 (345)
T 3fm0_A 113 WAPSGN-LLATCSRDK-SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEEDDWVCCAT 189 (345)
T ss_dssp ECTTSS-EEEEEETTS-CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETTEEEEEEE
T ss_pred EeCCCC-EEEEEECCC-eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCCCEEEEEE
Confidence 998554 444433333 56666665443322 2223344567899998766665554 44556666654433222222
Q ss_pred cCCCCccceeeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 156 TEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 156 ~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
..........|++. .+.++++-...+.|...+.
T Consensus 190 ~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 190 LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 11112233556654 3444455455566665543
No 376
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.11 E-value=0.89 Score=52.14 Aligned_cols=179 Identities=11% Similarity=0.051 Sum_probs=94.7
Q ss_pred CCceeEEEccCcc-cEE---ecCCCCCceEEEecc--CCeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcceE
Q psy6570 6 SGNVTRVKREMNL-KTV---LSNLHDPRGVAVDWV--GKNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYDI 77 (713)
Q Consensus 6 ~~~I~~~~~~~~~-~~~---~~~~~~p~gla~D~~--~~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~i 77 (713)
++.|...++.+.. ..+ ......+..|++.+. +..|+.+ . ..+.|.+.++.... ..............|
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg-s---~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-S---SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-E---TTSEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE-e---CCCcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 5666666666542 111 223445678888877 4555544 4 46889998887652 222222334567788
Q ss_pred EEcCC------------CCcEEEEccCCCCeEEEEecCCCCcE-EE---EeCCCCCCeeEEEeCCC--CeEEEEcCCCCc
Q psy6570 78 ALEPL------------SGRMFWTELGIKPRISGASIDGKNKF-NL---VDNNIQWPTGITIDYPS--QRLYWADPKART 139 (713)
Q Consensus 78 avD~~------------~~~ly~td~~~~~~I~~~~~dG~~~~-~l---~~~~~~~p~glavd~~~--~~LY~~d~~~~~ 139 (713)
+++|. ++.++++..... .|...++...... .+ +.........|++++.. +.++++-...+.
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred EecCcccccccccccCCCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 99874 244444443333 5666666543321 22 12234456889999873 555555555667
Q ss_pred EEEEeCCCCcee---EEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 140 IESINLNGKDRF---VVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 140 I~~~~~~g~~~~---~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
|...++...... .+...........++++. ++.++++....+.|..++..
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 777776553211 111111111223445554 33444444456667766654
No 377
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.10 E-value=0.018 Score=44.04 Aligned_cols=33 Identities=42% Similarity=1.013 Sum_probs=24.5
Q ss_pred CCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCcc
Q psy6570 634 HFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTL 671 (713)
Q Consensus 634 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~ 671 (713)
+.|.++ +|... .....+.|.|++||+|.+|+..
T Consensus 46 ~yClnG-~C~~i----~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 46 DFCIHG-ECKYV----KELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp TCCSSE-EECCB----GGGTBCCEEECTTEESTTCCEE
T ss_pred CcCCCC-Eeeee----cCCCCeEEEcCCCccccccccc
Confidence 678885 89541 2223478999999999999864
No 378
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.02 E-value=0.032 Score=50.59 Aligned_cols=35 Identities=40% Similarity=0.809 Sum_probs=20.0
Q ss_pred CCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCcC
Q psy6570 555 CTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTER 589 (713)
Q Consensus 555 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 589 (713)
|.+++|.++++|.+..++|.|.|.+||.|..|+..
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 33445555666666555666666666666666543
No 379
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=94.00 E-value=0.011 Score=65.17 Aligned_cols=48 Identities=19% Similarity=0.502 Sum_probs=42.7
Q ss_pred eecCCCcccCCCCcCCCCCCCCCCCCeecCCCCccCCCCCceeeCCCCcccCCCCccc
Q psy6570 615 CTCVNGWSGITCSERVSCAHFCFNGGTCREQNYSLDPDLKPICICPRGYAGVRCQTLV 672 (713)
Q Consensus 615 C~C~~G~~G~~C~~~~~C~~~C~~~~~C~~~~~~~~~~~~~~C~C~~Gy~G~~C~~~~ 672 (713)
..|.+||.|..|.....|...|..+|.|+. ++|+|.+||+|..|+.+.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~----------G~C~Cd~G~~G~~C~~~~ 567 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ----------GSCVCDEQWGGLYCDEPE 567 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET----------TEEEECTTEESTTSCEES
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC----------CCEeeCCCccCCCcCccC
Confidence 478999999999855779999999999998 799999999999998754
No 380
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.94 E-value=3.2 Score=41.81 Aligned_cols=94 Identities=9% Similarity=-0.081 Sum_probs=56.2
Q ss_pred cCCceeEEEccC-ccc---EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEE-
Q psy6570 5 SSGNVTRVKREM-NLK---TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIAL- 79 (713)
Q Consensus 5 ~~~~I~~~~~~~-~~~---~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iav- 79 (713)
.++.|...++.. ... .+......+..|++.+.++.|+.+. ..+.|.+.+++......+... ......|++
T Consensus 62 ~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----~dg~v~iwd~~~~~~~~~~~~-~~~v~~~~~~ 136 (368)
T 3mmy_A 62 WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS----CDKTAKMWDLSSNQAIQIAQH-DAPVKTIHWI 136 (368)
T ss_dssp TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTTEEEEEEEC-SSCEEEEEEE
T ss_pred CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc----CCCcEEEEEcCCCCceeeccc-cCceEEEEEE
Confidence 356677777664 222 2233345578899988666666544 467899999887665554432 356778888
Q ss_pred -cCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 80 -EPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 80 -D~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
++. +.++++-.... .|...++...
T Consensus 137 ~~~~-~~~l~~~~~dg-~i~vwd~~~~ 161 (368)
T 3mmy_A 137 KAPN-YSCVMTGSWDK-TLKFWDTRSS 161 (368)
T ss_dssp ECSS-CEEEEEEETTS-EEEEECSSCS
T ss_pred eCCC-CCEEEEccCCC-cEEEEECCCC
Confidence 654 44444433323 6777666543
No 381
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=93.90 E-value=0.1 Score=59.59 Aligned_cols=160 Identities=11% Similarity=0.025 Sum_probs=84.6
Q ss_pred ceEEEeccCCeEEEeecCCCC------------------------------CCeEEEEecCCceEE---EEEc-----CC
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRS------------------------------SNNIMVSTLEGRKKR---TLLN-----TG 70 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~------------------------------~~~I~~~~~~G~~~~---~l~~-----~~ 70 (713)
.++++.+.++.|+++...... ...|.+.++++.... .+.. ..
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 578998888888765431001 115667777665421 1110 11
Q ss_pred CCCcceEEEcCCCCcEEEE--ccCC-CCeEEEEe----cCCCCcEEEE----eCCCCCCe-----eEEEeCCCCeEEEE-
Q psy6570 71 LNEPYDIALEPLSGRMFWT--ELGI-KPRISGAS----IDGKNKFNLV----DNNIQWPT-----GITIDYPSQRLYWA- 133 (713)
Q Consensus 71 ~~~p~~iavD~~~~~ly~t--d~~~-~~~I~~~~----~dG~~~~~l~----~~~~~~p~-----glavd~~~~~LY~~- 133 (713)
......+++.|. +.|+++ +... ..+|++.+ +++...+.++ ...-.+.. .+++.+++++||+.
T Consensus 252 ~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 252 DYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp CEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred cceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 123457888876 556554 3222 23588888 5543322222 11112222 68899888877763
Q ss_pred c--CCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC------CCcEEEEcccCC
Q psy6570 134 D--PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR------TNNILKINKFGN 191 (713)
Q Consensus 134 d--~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~------~~~i~~~~~~~~ 191 (713)
. .+..+|+.+++++...+.+.........+.. . +++.||++... ...|++++..++
T Consensus 331 ~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~-~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVENAIQITSGKWEAINIFR-V-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp ECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEE-E-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EccCCceEEEEEECCCCceEecccCceEEEEEEE-E-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 2 3445799999888765444322111111121 2 56678877643 345677765433
No 382
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.87 E-value=1.9 Score=48.73 Aligned_cols=178 Identities=10% Similarity=0.053 Sum_probs=96.6
Q ss_pred CCceeEEEccCccc--EEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC---CCCcceEEEc
Q psy6570 6 SGNVTRVKREMNLK--TVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG---LNEPYDIALE 80 (713)
Q Consensus 6 ~~~I~~~~~~~~~~--~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~---~~~p~~iavD 80 (713)
++.|...++..... .+.........|++.+.++.|+ +-+ ..+.|.+.++.+.....+.... ......+++.
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s---~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SAS---RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEE---TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEe---CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 45566666554322 2223344567888887766665 444 4678888888776555443321 2346678888
Q ss_pred CCCC-cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCC
Q psy6570 81 PLSG-RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDN 159 (713)
Q Consensus 81 ~~~~-~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 159 (713)
|... .++++-.... .|...++........+.........|++++.+..|. +-...+.|...++..... +.....
T Consensus 527 ~~~~~~~l~s~s~d~-~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~-sg~~Dg~i~iwd~~~~~~--~~~~~~- 601 (694)
T 3dm0_A 527 PNTLQPTIVSASWDK-TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA-SGGKDGVVLLWDLAEGKK--LYSLEA- 601 (694)
T ss_dssp SCSSSCEEEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSBCEEEETTTTEE--EECCBC-
T ss_pred CCCCcceEEEEeCCC-eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCce--EEEecC-
Confidence 7542 3445443333 677778776555544444455678899997655544 444556777777654332 221111
Q ss_pred CccceeeeeeCCeEEEEeCCCCcEEEEcccCCC
Q psy6570 160 GYKPYKLEVFEDNLYFSTYRTNNILKINKFGNS 192 (713)
Q Consensus 160 ~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~~~ 192 (713)
......+.+..+..+++....+.|...+...+.
T Consensus 602 ~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 602 NSVIHALCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp SSCEEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 112344454433222222233456666654443
No 383
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.87 E-value=2.6 Score=44.13 Aligned_cols=162 Identities=14% Similarity=0.084 Sum_probs=86.5
Q ss_pred cCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-----------EEEEEcCCC------------CCcceEEE
Q psy6570 23 SNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-----------KRTLLNTGL------------NEPYDIAL 79 (713)
Q Consensus 23 ~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-----------~~~l~~~~~------------~~p~~iav 79 (713)
........|++++.+..|.... ..+.|.+.+++... ....+.... .....|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~----~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGD----KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEE----TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccCcEEEEEECCCCCEEEEEc----CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 3345678899998766665544 36788888877543 122222222 45788999
Q ss_pred cCCC--CcEEEEccCCCCeEEEEecCCCCc----------------------------------------EEEEeCCCCC
Q psy6570 80 EPLS--GRMFWTELGIKPRISGASIDGKNK----------------------------------------FNLVDNNIQW 117 (713)
Q Consensus 80 D~~~--~~ly~td~~~~~~I~~~~~dG~~~----------------------------------------~~l~~~~~~~ 117 (713)
.|.. ..|+.+... . .|...+++.... +.+.......
T Consensus 102 ~~~~~~~~l~s~s~d-~-~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 102 LPQKNAAQFLLSTND-K-TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CCCCSSSEEEEEECS-S-CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred cCCCCcceEEEeCCC-C-eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 9865 344444332 2 344433332111 0111223345
Q ss_pred CeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEE-e----cCCCCccceeeeeeC-C-eEEEEeCCCCcEEEEccc
Q psy6570 118 PTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVY-H----TEDNGYKPYKLEVFE-D-NLYFSTYRTNNILKINKF 189 (713)
Q Consensus 118 p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~-~----~~~~~~~p~~i~~~~-~-~ly~td~~~~~i~~~~~~ 189 (713)
...|++++....|..+ ..+.|...++.... ...+. . ..........+++.. + .++++-...+.|..++..
T Consensus 180 v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 6789999876666655 47888888887322 22111 0 100112234555542 2 566665666777777765
Q ss_pred CCC
Q psy6570 190 GNS 192 (713)
Q Consensus 190 ~~~ 192 (713)
.+.
T Consensus 258 ~~~ 260 (447)
T 3dw8_B 258 ASA 260 (447)
T ss_dssp TCS
T ss_pred CCc
Confidence 544
No 384
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.81 E-value=0.038 Score=38.40 Aligned_cols=31 Identities=39% Similarity=0.985 Sum_probs=20.2
Q ss_pred CCCCCCeeecC-CCCCCeeecCCCcccCCccc
Q psy6570 314 LDCNHGTCEFD-DDFDPHCICQENFYGTYCEK 344 (713)
Q Consensus 314 ~~C~~~~C~~~-~~~~~~C~C~~g~~G~~C~~ 344 (713)
+.|.||+|... ....+.|.|++||+|..|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 35777777652 23346777777777777764
No 385
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.76 E-value=0.045 Score=38.10 Aligned_cols=30 Identities=30% Similarity=0.845 Sum_probs=18.2
Q ss_pred CCCCCCeeec-CCCCCCeeecCCCcccCCcc
Q psy6570 314 LDCNHGTCEF-DDDFDPHCICQENFYGTYCE 343 (713)
Q Consensus 314 ~~C~~~~C~~-~~~~~~~C~C~~g~~G~~C~ 343 (713)
+.|.||+|.. .....+.|.|++||+|..|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccccccc
Confidence 4566777763 33334567777777777665
No 386
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.75 E-value=7 Score=43.94 Aligned_cols=115 Identities=16% Similarity=0.213 Sum_probs=64.1
Q ss_pred ceEEEeccCCeEEEeecCCCCCCeEEEEec-CCceEEEEEcC-C----CCCcceEEEcCCCCcEEEEccCC----CCeEE
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTL-EGRKKRTLLNT-G----LNEPYDIALEPLSGRMFWTELGI----KPRIS 98 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~~-~----~~~p~~iavD~~~~~ly~td~~~----~~~I~ 98 (713)
.+++++ +++||+... .++|+.++. +|+.+-.+-.. . .......+++ ++.||+..... .+.|+
T Consensus 122 ~~~a~~--~~~v~v~~~----dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~ 193 (677)
T 1kb0_A 122 RGVALW--KGKVYVGAW----DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYIT 193 (677)
T ss_dssp CCCEEE--TTEEEEECT----TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEE
T ss_pred CCceEE--CCEEEEEcC----CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEE
Confidence 567775 678888754 577888887 46554333322 1 0111122332 57788865431 23677
Q ss_pred EEecC-CCCcEEEEeCC-C---------------CCC---------------eeEEEeCCCCeEEEEcCCC---------
Q psy6570 99 GASID-GKNKFNLVDNN-I---------------QWP---------------TGITIDYPSQRLYWADPKA--------- 137 (713)
Q Consensus 99 ~~~~d-G~~~~~l~~~~-~---------------~~p---------------~glavd~~~~~LY~~d~~~--------- 137 (713)
.++.. |+.+-.+-... . .++ ..+++|+..++||+.....
T Consensus 194 a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~ 273 (677)
T 1kb0_A 194 AYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRS 273 (677)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHS
T ss_pred EEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCC
Confidence 77753 44333332111 0 011 3589999999999986432
Q ss_pred ---------CcEEEEeCCCCcee
Q psy6570 138 ---------RTIESINLNGKDRF 151 (713)
Q Consensus 138 ---------~~I~~~~~~g~~~~ 151 (713)
..|+.++.+.....
T Consensus 274 ~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 274 PKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEE
T ss_pred ccCCCCeeeEEEEEEECCCCCEE
Confidence 25888887644433
No 387
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.74 E-value=0.029 Score=50.90 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=29.7
Q ss_pred CCCCCCCCeEecCCCCcceeecCCCcccCCCCcCCCCC
Q psy6570 596 HNYCDNAGLCSYSKQGKPVCTCVNGWSGITCSERVSCA 633 (713)
Q Consensus 596 ~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~C~~~~~C~ 633 (713)
...|.++|.|.+.. ++|.|.|++||.|..|+...+|.
T Consensus 124 ~~~C~~~g~C~~~~-~~~~c~C~~g~~g~~C~~~~~c~ 160 (164)
T 3cfw_A 124 PWSCSGHGECVEII-NNYTCNCDVGYYGPQCQFVQVDP 160 (164)
T ss_dssp TTSSCSSEEEEEET-TEEEEEECTTCBSSSSCBC----
T ss_pred CCcCCCCCeecccC-CCceeeeCCCcccccccccccCc
Confidence 46788899999886 78999999999999999887775
No 388
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.72 E-value=1.5 Score=50.19 Aligned_cols=176 Identities=6% Similarity=-0.060 Sum_probs=94.8
Q ss_pred eeEEEccCc-ccEEecCCC-CCceEEEeccCCeEEEeecCCC-CCCeEEEEecCCce--EEEEEcCC-CCCcceEEEcCC
Q psy6570 9 VTRVKREMN-LKTVLSNLH-DPRGVAVDWVGKNLYWTDAGGR-SSNNIMVSTLEGRK--KRTLLNTG-LNEPYDIALEPL 82 (713)
Q Consensus 9 I~~~~~~~~-~~~~~~~~~-~p~gla~D~~~~~ly~td~~~~-~~~~I~~~~~~G~~--~~~l~~~~-~~~p~~iavD~~ 82 (713)
|+.+++++. ..+. ..+. ...++++.+.++.||++..... ...+|++.++++.. .+.+.... -..-.++++.+.
T Consensus 203 l~v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpD 281 (751)
T 2xe4_A 203 IEFKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAAD 281 (751)
T ss_dssp EEEEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTT
T ss_pred EEEEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCC
Confidence 777777665 3111 1111 1346777777777887754211 12479999998753 23343322 122346778887
Q ss_pred CCcEEEEccC-CCCeEEEEecCCCC--c--EEEEeCCCCCCeeEEEe-CCCCeEEEEc-C---CCCcEEEEeCCC-Ccee
Q psy6570 83 SGRMFWTELG-IKPRISGASIDGKN--K--FNLVDNNIQWPTGITID-YPSQRLYWAD-P---KARTIESINLNG-KDRF 151 (713)
Q Consensus 83 ~~~ly~td~~-~~~~I~~~~~dG~~--~--~~l~~~~~~~p~glavd-~~~~~LY~~d-~---~~~~I~~~~~~g-~~~~ 151 (713)
.++|+|+.+. ....|+.+++++.. . +.++. ....+ -..++ ..+++|||.. . ...+|+++++++ ...+
T Consensus 282 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~ 359 (751)
T 2xe4_A 282 TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-REKGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWS 359 (751)
T ss_dssp SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-CCTTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCC
T ss_pred CCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-CCCCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccce
Confidence 7788887543 34479999998652 2 33322 21111 12233 3477777763 2 356899999874 3323
Q ss_pred E-EEecCCCCccceeeeeeCCeEEEEeCC--CCcEEEEcc
Q psy6570 152 V-VYHTEDNGYKPYKLEVFEDNLYFSTYR--TNNILKINK 188 (713)
Q Consensus 152 ~-~~~~~~~~~~p~~i~~~~~~ly~td~~--~~~i~~~~~ 188 (713)
. ++.... .....++++++++||++... ...|+.++.
T Consensus 360 ~~li~~~~-~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 360 HVLVDHSE-DVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CEEECCCS-SEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeEECCCC-CcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 2 332211 11234566677888776543 234555553
No 389
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.71 E-value=5.2 Score=40.91 Aligned_cols=174 Identities=11% Similarity=0.069 Sum_probs=91.4
Q ss_pred CceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEe-cCCceEEEEEcCC-CCCcceEEEcCCC
Q psy6570 7 GNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVST-LEGRKKRTLLNTG-LNEPYDIALEPLS 83 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~-~~G~~~~~l~~~~-~~~p~~iavD~~~ 83 (713)
+.|...++.....+. +..-..+.+|+|.+.+..|..+ . . +.+.+.. .+|.......... -.....+++.|.+
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~-s---~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg 231 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYI-T---G-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD 231 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEE-C---S-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT
T ss_pred CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEec-c---c-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC
Confidence 445555655433222 3344567899999876655443 3 2 3344444 4454443332221 2346678888866
Q ss_pred CcEEEEccCCC--CeEEEEecCCCCcEE----EEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce-eEEEec
Q psy6570 84 GRMFWTELGIK--PRISGASIDGKNKFN----LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR-FVVYHT 156 (713)
Q Consensus 84 ~~ly~td~~~~--~~I~~~~~dG~~~~~----l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~-~~~~~~ 156 (713)
..|..+..... ..|+..++....... .+.......+.|+++|++.+|..+. ..+.|...++..... ..+...
T Consensus 232 ~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs-~D~~V~iwd~~~~~~~~~~~~g 310 (365)
T 4h5i_A 232 TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS-NDNSIALVKLKDLSMSKIFKQA 310 (365)
T ss_dssp EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEETTS
T ss_pred CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc-CCCEEEEEECCCCcEEEEecCc
Confidence 55555433222 134444443332221 1223444567899998766665554 456788888754332 222221
Q ss_pred CCCCccceeeeee-CCeEEEEeCCCCcEEEEcc
Q psy6570 157 EDNGYKPYKLEVF-EDNLYFSTYRTNNILKINK 188 (713)
Q Consensus 157 ~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~ 188 (713)
......+|++. ++.++++-...+.|+.++.
T Consensus 311 --H~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 311 --HSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp --SSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred --ccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 12233566665 4566666666777776664
No 390
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.71 E-value=3.2 Score=50.40 Aligned_cols=136 Identities=8% Similarity=-0.074 Sum_probs=82.1
Q ss_pred CCceeEEEccCcccEE--ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV--LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~--~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...+..+...+. ......+..|++.+.++.|..+. ..+.|.+.++........+.........+++.+..
T Consensus 636 d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS----ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred CCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe----CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC
Confidence 4566666665543222 22344567899988766665443 46789999987544433333444567788888753
Q ss_pred C-cEEEEccCCCCeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 84 G-RMFWTELGIKPRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 84 ~-~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
. .++++..... .|...+++.......+.........+++++.+..|+.+. ..+.|...++..
T Consensus 712 ~~~~l~sg~~d~-~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 712 NHLLLATGSNDF-FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-ADGTLRLWDVRS 774 (1249)
T ss_dssp SCCEEEEEETTS-CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE-SSSEEEEEEGGG
T ss_pred CceEEEEEeCCC-eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE-CCCeEEEEeCCC
Confidence 3 3444433333 688888776555444444455678899998666555443 456677766644
No 391
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.62 E-value=3.8 Score=40.33 Aligned_cols=115 Identities=10% Similarity=0.055 Sum_probs=65.3
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc---eEEEEEcCCCCCcceEEEcCC-CCcEEEEccCCCCeEEEEec
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR---KKRTLLNTGLNEPYDIALEPL-SGRMFWTELGIKPRISGASI 102 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~---~~~~l~~~~~~~p~~iavD~~-~~~ly~td~~~~~~I~~~~~ 102 (713)
....+++++.++.|. +-. ..+.|.+.++++. ...++. .-......|++.+. .+.++.+-.... .|..-++
T Consensus 11 ~V~~~~~s~~g~~la-s~s---~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd~ 84 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMA-TCS---SDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWKE 84 (297)
T ss_dssp CEEEEEECTTSSEEE-EEE---TTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEEB
T ss_pred ceEEEEECCCCCEEE-EEe---CCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEEc
Confidence 456789998766555 444 4678888888643 223332 22245667888643 356666554433 6666666
Q ss_pred CCCC--cEEEEeCCCCCCeeEEEeCCC-CeEEEEcCCCCcEEEEeCCC
Q psy6570 103 DGKN--KFNLVDNNIQWPTGITIDYPS-QRLYWADPKARTIESINLNG 147 (713)
Q Consensus 103 dG~~--~~~l~~~~~~~p~glavd~~~-~~LY~~d~~~~~I~~~~~~g 147 (713)
.... ....+.........|++.+.. +.++++-...+.|...++..
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 5432 222222233456788998752 44444444566777777654
No 392
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.59 E-value=2.6 Score=44.15 Aligned_cols=165 Identities=9% Similarity=-0.003 Sum_probs=84.5
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEec----CCceEEEEEcC-----------CCCCcceEE--EcCCCCcEE
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTL----EGRKKRTLLNT-----------GLNEPYDIA--LEPLSGRMF 87 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~----~G~~~~~l~~~-----------~~~~p~~ia--vD~~~~~ly 87 (713)
...+..|++.+.+..|+.+ . ..+.|.+.++ .|+..+.+... .......++ ..+ ++.++
T Consensus 111 ~~~v~~~~~~~~~~~l~s~-s---~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 185 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVS-S---KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLL 185 (437)
T ss_dssp SSCEEEEEECTTSSEEEEE-E---TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEE
T ss_pred CCCEEEEEEeCCCCEEEEE-e---CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEE
Confidence 4456788888765555544 3 4577777766 34433322111 111222233 222 34444
Q ss_pred EEccCCCCeEEEEecCCCCcEEEEeC--CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCcccee
Q psy6570 88 WTELGIKPRISGASIDGKNKFNLVDN--NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYK 165 (713)
Q Consensus 88 ~td~~~~~~I~~~~~dG~~~~~l~~~--~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~ 165 (713)
++-.... .|...++........+.. .......|++++....|+.+. ..+.|...++............. ......
T Consensus 186 ~~~~~d~-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~ 262 (437)
T 3gre_A 186 VALTNLS-RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNVLIRSWSFGD-HAPITH 262 (437)
T ss_dssp EEEETTS-EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEEBCTT-CEEEEE
T ss_pred EEEeCCC-eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCccEEEEEecCC-CCceEE
Confidence 4443333 788888865554444443 345678999998766665554 45678888876533222221111 112233
Q ss_pred eee----e-CCeEEEEeCCCCcEEEEcccCCCcceee
Q psy6570 166 LEV----F-EDNLYFSTYRTNNILKINKFGNSDFNVL 197 (713)
Q Consensus 166 i~~----~-~~~ly~td~~~~~i~~~~~~~~~~~~~~ 197 (713)
+.+ . ++.++++....+.|..++...+.....+
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 422 1 2345555556666777776555443333
No 393
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=93.49 E-value=0.21 Score=57.00 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=79.7
Q ss_pred cCCceeEEEccCccc-EEecCCC----CCceEEEeccCCeEEEeecCC-----CCCCeEEEEecCCceE---EEEEcCCC
Q psy6570 5 SSGNVTRVKREMNLK-TVLSNLH----DPRGVAVDWVGKNLYWTDAGG-----RSSNNIMVSTLEGRKK---RTLLNTGL 71 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~-~~~~~~~----~p~gla~D~~~~~ly~td~~~-----~~~~~I~~~~~~G~~~---~~l~~~~~ 71 (713)
.++.|+.++..+... .+..... ....+++.+.++.|+++.... .....|.+.++++... +.+.
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---- 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---- 109 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----
Confidence 367788888877543 3332221 378899999888887654310 0136799999887654 2221
Q ss_pred CCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCC------------------CCCeeEEEeCCCCeEEEE
Q psy6570 72 NEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNKFNLVDNNI------------------QWPTGITIDYPSQRLYWA 133 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~------------------~~p~glavd~~~~~LY~~ 133 (713)
.....+++.|..++|.++.. + .|++.++++...+.+..... ....++++.|++++|+++
T Consensus 110 ~~~~~~~~SPDG~~la~~~~--~-~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~ 186 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVYQ--N-NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYA 186 (719)
T ss_dssp SSBCCEEECSSTTCEEEEET--T-EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEE
T ss_pred cccccceECCCCCEEEEEEC--C-eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEE
Confidence 34677999998888877742 3 78888887665554432111 222589999998888876
Q ss_pred c
Q psy6570 134 D 134 (713)
Q Consensus 134 d 134 (713)
.
T Consensus 187 ~ 187 (719)
T 1z68_A 187 E 187 (719)
T ss_dssp E
T ss_pred E
Confidence 4
No 394
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=93.48 E-value=0.033 Score=42.01 Aligned_cols=36 Identities=36% Similarity=0.707 Sum_probs=25.3
Q ss_pred CCCCCCC--CCCCCcEEeecCC-CceeeCCCCCc----CCCCCcC
Q psy6570 552 ANKCTPN--YCSNNGTCVLIEG-KPSCKCLPPYS----GKQCTER 589 (713)
Q Consensus 552 ~~~C~~~--~C~~~~~C~~~~g-~~~C~C~~G~~----G~~C~~~ 589 (713)
+++|..+ .|+ ..|+++.| +|+|.|++||. |+.|.++
T Consensus 5 ~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~ 47 (69)
T 1kli_L 5 QLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 47 (69)
T ss_dssp CCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred cccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccCc
Confidence 5666533 353 36888888 78899999986 5677665
No 395
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.45 E-value=4.8 Score=45.31 Aligned_cols=162 Identities=9% Similarity=-0.015 Sum_probs=91.9
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce------EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEE
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK------KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRIS 98 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~------~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~ 98 (713)
......|++.+.+..++++-+ ..+.|.+.+++... .+.+. ........|++.+...+| ++-.... .|.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s---~D~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l-~sgs~Dg-~v~ 455 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSAS---RDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLSSDGQFA-LSGSWDG-ELR 455 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEE---TTSEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEECTTSSEE-EEEETTS-EEE
T ss_pred CceeEEEEecCCCCCEEEEEe---CCCcEEEEEccCCCcccccccceec-CCCCcEEEEEECCCCCEE-EEEeCCC-cEE
Confidence 344567888776667777776 57788888875421 22222 333567789999755444 4443333 677
Q ss_pred EEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCC-ccceeeeeeC---CeEE
Q psy6570 99 GASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNG-YKPYKLEVFE---DNLY 174 (713)
Q Consensus 99 ~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~-~~p~~i~~~~---~~ly 174 (713)
.-++........+.........|++++.+.+|+.+ ...+.|...+..+.....+....... .....+++.. ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSA-SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEE-ETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEE-eCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 77776544433344445556889999876666544 44567777777665444443221111 1123344432 1345
Q ss_pred EEeCCCCcEEEEcccCCCc
Q psy6570 175 FSTYRTNNILKINKFGNSD 193 (713)
Q Consensus 175 ~td~~~~~i~~~~~~~~~~ 193 (713)
++-...+.|...+......
T Consensus 535 ~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp EEEETTSCEEEEETTTCCE
T ss_pred EEEeCCCeEEEEECCCCcE
Confidence 5555566676666554433
No 396
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.40 E-value=3.1 Score=41.95 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=62.8
Q ss_pred CCcceEEEcC--CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCC-CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 72 NEPYDIALEP--LSGRMFWTELGIKPRISGASIDGKNKFNLVDNN-IQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 72 ~~p~~iavD~--~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~-~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
.....|+++| .+ .++++-.... .|...++.......+.... ......+++++.+. ++.+-...+.|...++...
T Consensus 126 ~~v~~~~~~~~~~~-~~l~s~s~dg-~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 126 NEIIYMYGHNEVNT-EYFIWADNRG-TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp SCEEEEECCC---C-CEEEEEETTC-CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCT
T ss_pred CCEEEEEcCCCCCC-CEEEEEeCCC-cEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC
Confidence 4577899987 44 4444433333 6888887765554443222 22467899997554 4444456678888888655
Q ss_pred cee-EEEecCCCCccceeeeee--CCeEEEEeCCCCcEEEEcccCCC
Q psy6570 149 DRF-VVYHTEDNGYKPYKLEVF--EDNLYFSTYRTNNILKINKFGNS 192 (713)
Q Consensus 149 ~~~-~~~~~~~~~~~p~~i~~~--~~~ly~td~~~~~i~~~~~~~~~ 192 (713)
... ..+... .......|++. +.+|..+. .+.|...+.....
T Consensus 203 ~~~~~~~~~~-h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFPVD-EEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECCCC-TTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSST
T ss_pred CCCccEEecc-CCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCC
Confidence 433 222210 12233455554 33444443 3377777765443
No 397
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.37 E-value=0.041 Score=38.40 Aligned_cols=31 Identities=35% Similarity=0.997 Sum_probs=19.7
Q ss_pred CCCCCCeeec-CCCCCCeeecCCCcccCCccc
Q psy6570 314 LDCNHGTCEF-DDDFDPHCICQENFYGTYCEK 344 (713)
Q Consensus 314 ~~C~~~~C~~-~~~~~~~C~C~~g~~G~~C~~ 344 (713)
+.|.||+|.. .....+.|.|++||+|..|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 3467777753 333346777777777777764
No 398
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.34 E-value=3.2 Score=47.76 Aligned_cols=151 Identities=10% Similarity=0.008 Sum_probs=87.0
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcC------C--CCCcceEEEcCCCCc-EEEEccCCCCeEE
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT------G--LNEPYDIALEPLSGR-MFWTELGIKPRIS 98 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~------~--~~~p~~iavD~~~~~-ly~td~~~~~~I~ 98 (713)
..+|+.|. .+.||+.-. .+-|.+++.+....+.+... . ......|+.|+ ++. ||+...+ . .|.
T Consensus 359 V~~i~~d~-~g~lWiGt~----~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~-~-Gl~ 430 (795)
T 4a2l_A 359 VSCIVEDK-DKNLWIGTN----DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHA-G-GLS 430 (795)
T ss_dssp EEEEEECT-TSCEEEEES----SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETT-T-EEE
T ss_pred eEEEEECC-CCCEEEEEC----CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCc-C-cee
Confidence 56777885 467776543 44688888765444333211 1 24567899985 677 6665432 3 588
Q ss_pred EEecCCCCcEEEEeC----CCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEec----CCCCccceeeeee-
Q psy6570 99 GASIDGKNKFNLVDN----NIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHT----EDNGYKPYKLEVF- 169 (713)
Q Consensus 99 ~~~~dG~~~~~l~~~----~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~~~p~~i~~~- 169 (713)
+++.+....+.+... .......|+.|. .++|+++.. .-|.+++.+....+.+... .........|..+
T Consensus 431 ~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 431 ILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred EEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 888776544444221 123456788884 678888765 4688888765443333211 0011223455555
Q ss_pred CCeEEEEeCCCCcEEEEcccCC
Q psy6570 170 EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 170 ~~~ly~td~~~~~i~~~~~~~~ 191 (713)
++.||+... +.|++++..+.
T Consensus 508 ~g~lWigt~--~Gl~~~~~~~~ 527 (795)
T 4a2l_A 508 HKRLWIGGE--EGLSVFKQEGL 527 (795)
T ss_dssp TCCEEEEES--SCEEEEEEETT
T ss_pred CCCEEEEeC--CceEEEeCCCC
Confidence 456776654 56888876543
No 399
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.09 E-value=0.027 Score=61.54 Aligned_cols=35 Identities=37% Similarity=0.900 Sum_probs=32.1
Q ss_pred cCCCCCCCCCcEecc-CCCCccccCC-CCCcCCCCcc
Q psy6570 417 QCLNLKCQNGGVCVN-KTTGLECDCP-KFYYGKNCQY 451 (713)
Q Consensus 417 ~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~C~~ 451 (713)
+|.+.||.++|+|.+ ..++|.|.|+ +||+|..|+.
T Consensus 4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred cCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 578899999999999 8889999999 9999999984
No 400
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=92.93 E-value=0.038 Score=38.87 Aligned_cols=28 Identities=21% Similarity=0.629 Sum_probs=21.0
Q ss_pred cEeccCCCCccccCCCCCc----CCCCc-cCCC
Q psy6570 427 GVCVNKTTGLECDCPKFYY----GKNCQ-YSQC 454 (713)
Q Consensus 427 ~~C~~~~~~~~C~C~~G~~----g~~C~-~~~C 454 (713)
..|+++.++|+|.|++||. +..|+ ++++
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 3688888999999999996 55665 4443
No 401
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.86 E-value=3.4 Score=48.31 Aligned_cols=176 Identities=11% Similarity=0.010 Sum_probs=98.1
Q ss_pred CCceeEEEccCcccEE-ecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCCC
Q psy6570 6 SGNVTRVKREMNLKTV-LSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPLS 83 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~-~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~~ 83 (713)
++.|...+..+..... ...-.....|+|.+ +..|+ +-. ..+.|.+.+++... ...+. . -.....|+++|..
T Consensus 38 Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~-S~s---~D~~v~lWd~~~~~~~~~~~-~-~~~V~~v~~sp~g 110 (902)
T 2oaj_A 38 TGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLV-VIN---AKDTVYVLSLYSQKVLTTVF-V-PGKITSIDTDASL 110 (902)
T ss_dssp TSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEE-EEE---TTCEEEEEETTTCSEEEEEE-C-SSCEEEEECCTTC
T ss_pred CCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEE-EEE---CcCeEEEEECCCCcEEEEEc-C-CCCEEEEEECCCC
Confidence 4455555554432222 22233467899988 44344 434 46889999986543 33443 2 2467889999877
Q ss_pred CcEEEEccCCCCeEEEEecCCCCcEEEE-----------eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeE
Q psy6570 84 GRMFWTELGIKPRISGASIDGKNKFNLV-----------DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFV 152 (713)
Q Consensus 84 ~~ly~td~~~~~~I~~~~~dG~~~~~l~-----------~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~ 152 (713)
.+|+..... . .|...++++.....+. .........|+++|.+..++.+-...+.| ..++.......
T Consensus 111 ~~l~sgs~d-g-~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~ 187 (902)
T 2oaj_A 111 DWMLIGLQN-G-SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQ 187 (902)
T ss_dssp SEEEEEETT-S-CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEE
T ss_pred CEEEEEcCC-C-cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEE
Confidence 777776543 2 5777787765432111 11234567899998655555555556677 77776543322
Q ss_pred EEecC----------------CCCccceeeeee-CCeEEEEeCCCCcEEEEcccCC
Q psy6570 153 VYHTE----------------DNGYKPYKLEVF-EDNLYFSTYRTNNILKINKFGN 191 (713)
Q Consensus 153 ~~~~~----------------~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~~~ 191 (713)
.+... ........+++. ++.++++-...+.|...+...+
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 188 SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 22211 000123455554 3455556556667777765444
No 402
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.71 E-value=0.053 Score=59.29 Aligned_cols=36 Identities=31% Similarity=0.767 Sum_probs=30.8
Q ss_pred CCC-CCCCCCCCeEecCCCCcceeecC-CCcccCCCCc
Q psy6570 593 PSC-HNYCDNAGLCSYSKQGKPVCTCV-NGWSGITCSE 628 (713)
Q Consensus 593 ~~C-~~~C~~~g~C~~~~~g~~~C~C~-~G~~G~~C~~ 628 (713)
++| .++|.|+|+|.+...++|.|.|+ +||+|..|+.
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 567 78999999999643378999999 9999999985
No 403
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.53 E-value=5.3 Score=48.47 Aligned_cols=159 Identities=10% Similarity=-0.034 Sum_probs=95.3
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG 104 (713)
......+++.+.+..|+... ..+.|.+.++........+......+..|++.|.+.+|.... ... .|...++..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~----~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d~-~v~vwd~~~ 688 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCG----ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS-ADK-KVKIWDSAT 688 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTS-EEEEEETTT
T ss_pred cccEEEEEECCCCCEEEEEe----CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-CCC-eEEEEECCC
Confidence 44567889998766665443 467899988866544433434446788999998655555544 333 688888775
Q ss_pred CCcEEEEeCCCCCCeeEEEeCCCC-eEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCCCCc
Q psy6570 105 KNKFNLVDNNIQWPTGITIDYPSQ-RLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNN 182 (713)
Q Consensus 105 ~~~~~l~~~~~~~p~glavd~~~~-~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~ 182 (713)
......+.........+++.+..+ .++++-...+.|...++............ ......+++. ++.++++....+.
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h--~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGH--TNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCC--SSCEEEEEECSSTTEEEEEESSSE
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCC--CCCEEEEEEecCCCEEEEEECCCe
Confidence 554444444555667888987543 34445556677888887655433322221 2233445544 3345555555667
Q ss_pred EEEEcccCC
Q psy6570 183 ILKINKFGN 191 (713)
Q Consensus 183 i~~~~~~~~ 191 (713)
|..++...+
T Consensus 767 v~vwd~~~~ 775 (1249)
T 3sfz_A 767 LRLWDVRSA 775 (1249)
T ss_dssp EEEEEGGGT
T ss_pred EEEEeCCCC
Confidence 777765544
No 404
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=92.49 E-value=0.063 Score=52.82 Aligned_cols=60 Identities=28% Similarity=0.645 Sum_probs=42.9
Q ss_pred CCCCcEEeecCCCceeeCCCCCcCCCCCcCCCCC-------CCC-----CCCCCCCeEecCCCCcceeecCCCc------
Q psy6570 560 CSNNGTCVLIEGKPSCKCLPPYSGKQCTEREDSP-------SCH-----NYCDNAGLCSYSKQGKPVCTCVNGW------ 621 (713)
Q Consensus 560 C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~~-------~C~-----~~C~~~g~C~~~~~g~~~C~C~~G~------ 621 (713)
|+.+|+|. -..|.|.+||+|..|+-..+.. .|. ..|+++|.|... +|.|.+++
T Consensus 198 C~g~G~~~----CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG-----~C~C~~~~~~~~~~ 268 (280)
T 2p26_A 198 CHGKGFLE----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCLCHTSDVPGKLI 268 (280)
T ss_dssp GGGSEEEE----TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT-----EEEECCCSSTTCEE
T ss_pred cCCCCeEC----CCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC-----eeECcCCCCCCeeE
Confidence 66778887 3479999999999997432211 573 259999999864 49998775
Q ss_pred ccCCCCc
Q psy6570 622 SGITCSE 628 (713)
Q Consensus 622 ~G~~C~~ 628 (713)
.|..|+.
T Consensus 269 ~G~~~~~ 275 (280)
T 2p26_A 269 YGQYCEH 275 (280)
T ss_dssp ESTTSCE
T ss_pred eeEeccc
Confidence 5667653
No 405
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.46 E-value=6.2 Score=44.34 Aligned_cols=75 Identities=4% Similarity=-0.038 Sum_probs=41.4
Q ss_pred eeEEEeCCCCeEEEEcC-----------------------------------CCCcEEEEeCCCCceeEEEecCCCCccc
Q psy6570 119 TGITIDYPSQRLYWADP-----------------------------------KARTIESINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 119 ~glavd~~~~~LY~~d~-----------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~~~p 163 (713)
.++++|+.++.+|+... ..+.|..+|+......--..... ....
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcC
Confidence 45899999999998421 11457777764433221111111 1112
Q ss_pred eeeeeeCCeEEEEeCCCCcEEEEcccCCCcce
Q psy6570 164 YKLEVFEDNLYFSTYRTNNILKINKFGNSDFN 195 (713)
Q Consensus 164 ~~i~~~~~~ly~td~~~~~i~~~~~~~~~~~~ 195 (713)
..++..++.||+.+ ..+.|+.++...+..+.
T Consensus 463 ~~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 463 GTLSTAGNLVFQGT-AAGQMHAYSADKGEALW 493 (668)
T ss_dssp CEEEETTTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred ceeEeCCCEEEEEC-CcccchhhhhhcChhhe
Confidence 23455677777763 45677777766555443
No 406
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.45 E-value=9.8 Score=38.19 Aligned_cols=116 Identities=10% Similarity=0.042 Sum_probs=67.3
Q ss_pred CCceEEE-----eccCCeEEEeecCCCCCCeEEEEecCCce-------EEEEEcCCCCCcceEEEcCCCCcEEEEccCCC
Q psy6570 27 DPRGVAV-----DWVGKNLYWTDAGGRSSNNIMVSTLEGRK-------KRTLLNTGLNEPYDIALEPLSGRMFWTELGIK 94 (713)
Q Consensus 27 ~p~gla~-----D~~~~~ly~td~~~~~~~~I~~~~~~G~~-------~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~ 94 (713)
....|++ .+..+.++++-. ..+.|.+.++.... ....+.........|++.|... ++++-....
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs---~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~-~l~s~s~D~ 98 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGS---RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC-FAISSSWDK 98 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEE---TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-EEEEEETTS
T ss_pred hhhheeeEEEeecCCCCCEEEEEc---CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-EEEEEcCCC
Confidence 3466777 332455666665 56778777765321 1122222235577899987544 444443333
Q ss_pred CeEEEEecCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 95 PRISGASIDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 95 ~~I~~~~~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
.|..-++........+.........|++++.+.+|+.+. ..+.|...++.+.
T Consensus 99 -~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 99 -TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGE 150 (343)
T ss_dssp -EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSC
T ss_pred -cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCC
Confidence 677777764443333333445668899998777666554 4566777777643
No 407
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.44 E-value=11 Score=38.97 Aligned_cols=159 Identities=11% Similarity=-0.000 Sum_probs=87.4
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE----EEEEcCCCCCcceEEEcCCCCcEEEEccC-CCCeEEEEe
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK----RTLLNTGLNEPYDIALEPLSGRMFWTELG-IKPRISGAS 101 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~----~~l~~~~~~~p~~iavD~~~~~ly~td~~-~~~~I~~~~ 101 (713)
...++.+.+.+..|+ +-. ..+.|.+.+...... .............+++.|....++.+-.+ ....|...+
T Consensus 232 ~~~~~~~~~~g~~l~-s~~---~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd 307 (420)
T 4gga_A 232 EVCGLRWAPDGRHLA-SGG---NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 307 (420)
T ss_dssp CEEEEEECTTSSEEE-EEE---TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEE
T ss_pred ceeeeeecCCCCeee-eee---ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEe
Confidence 345555555444343 333 345566655542211 11111223456678888888887776433 233677777
Q ss_pred cCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcC-CCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCC
Q psy6570 102 IDGKNKFNLVDNNIQWPTGITIDYPSQRLYWADP-KARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYR 179 (713)
Q Consensus 102 ~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~ 179 (713)
+........+. .......+++.+..+.|+.+.. ..+.|...++........+.. ....-..|++. ++.++++-..
T Consensus 308 ~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g--H~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 308 VCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEET
T ss_pred CCccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEec
Confidence 76544433333 3345678889988888887753 567788888764433222222 12233556654 3445566556
Q ss_pred CCcEEEEcccCCC
Q psy6570 180 TNNILKINKFGNS 192 (713)
Q Consensus 180 ~~~i~~~~~~~~~ 192 (713)
.+.|+..+.+...
T Consensus 385 D~tvriWdv~~~~ 397 (420)
T 4gga_A 385 DETLRLWRCFELD 397 (420)
T ss_dssp TTEEEEECCSCSS
T ss_pred CCeEEEEECCCCC
Confidence 6777777665443
No 408
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.43 E-value=1 Score=46.18 Aligned_cols=154 Identities=8% Similarity=-0.003 Sum_probs=80.3
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
.....|++.+.++.|+ +-. ..+.|.+.++++.. ....+.........|++.|...+|+..... . .|...+++
T Consensus 12 ~~v~~~~~s~~g~~l~-~~~---~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~-~v~vwd~~ 85 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFV-TTT---ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-R-NAYVYEKR 85 (377)
T ss_dssp SCCSCCEECSSSSEEE-CCC---SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-S-SEEEC---
T ss_pred CcEEEEEECCCCCEEE-Eec---CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-C-eEEEEEcC
Confidence 4577889988655554 433 35677777776542 222222223557889999876666555433 2 56666665
Q ss_pred CCC---cEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc----eeEEEecCCCCccceeeeee-CCeEEE
Q psy6570 104 GKN---KFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD----RFVVYHTEDNGYKPYKLEVF-EDNLYF 175 (713)
Q Consensus 104 G~~---~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~~~p~~i~~~-~~~ly~ 175 (713)
... ....+.........|++++....|+.+. ..+.|...+++... ...+... .......|++. ++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRP--LRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSS--CCSCEEEEEECTTSSEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecc--cCCCeEEEEEcCCCCEEE
Confidence 443 2222223344567899998766666655 35667777776543 2233221 12233455554 334444
Q ss_pred EeCCCCcEEEEcc
Q psy6570 176 STYRTNNILKINK 188 (713)
Q Consensus 176 td~~~~~i~~~~~ 188 (713)
+-...+.|..++.
T Consensus 163 ~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 163 AGCADRKAYVLSA 175 (377)
T ss_dssp EEESSSCEEEEEE
T ss_pred EEeCCCEEEEEEE
Confidence 4445566666664
No 409
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=92.27 E-value=0.053 Score=53.36 Aligned_cols=58 Identities=28% Similarity=0.724 Sum_probs=43.4
Q ss_pred CCCCCeEecCCCCcceeecCCCcccCCCCcC--C--------CCC-----CCCCCCCeecCCCCccCCCCCceeeCCCC-
Q psy6570 599 CDNAGLCSYSKQGKPVCTCVNGWSGITCSER--V--------SCA-----HFCFNGGTCREQNYSLDPDLKPICICPRG- 662 (713)
Q Consensus 599 C~~~g~C~~~~~g~~~C~C~~G~~G~~C~~~--~--------~C~-----~~C~~~~~C~~~~~~~~~~~~~~C~C~~G- 662 (713)
|+++|.|... .|.|.+||+|..|+-. . .|. ..|..+|+|+- ++|+|..+
T Consensus 198 C~g~G~~~CG-----~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C----------G~C~C~~~~ 262 (280)
T 2p26_A 198 CHGKGFLECG-----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----------GQCLCHTSD 262 (280)
T ss_dssp GGGSEEEETT-----EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET----------TEEEECCCS
T ss_pred cCCCCeECCC-----ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC----------CeeECcCCC
Confidence 7777888743 4999999999999721 1 474 24888888887 79999776
Q ss_pred -----cccCCCCcc
Q psy6570 663 -----YAGVRCQTL 671 (713)
Q Consensus 663 -----y~G~~C~~~ 671 (713)
|.|..|+.-
T Consensus 263 ~~~~~~~G~~~~~~ 276 (280)
T 2p26_A 263 VPGKLIYGQYCEHH 276 (280)
T ss_dssp STTCEEESTTSCEE
T ss_pred CCCeeEeeEecccc
Confidence 577788753
No 410
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=92.21 E-value=0.035 Score=49.89 Aligned_cols=38 Identities=26% Similarity=0.819 Sum_probs=28.2
Q ss_pred ccCCCCCCCCCCceeeCCCCCCCCCceeeCCCCcccCCCCcc
Q psy6570 344 KVNNSMCPCLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESR 385 (713)
Q Consensus 344 ~~~c~~~~C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~ 385 (713)
...|...||.+++.|.+... .|.|.|.+||+|..|+..
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~----~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETIN----NYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETT----EEEEEECTTEESTTSCEE
T ss_pred cCCCCCCCCCCCCEeecCCC----CeeEECCCCccCcccccc
Confidence 33445567887888877644 788999999999888754
No 411
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.11 E-value=10 Score=37.78 Aligned_cols=177 Identities=11% Similarity=-0.054 Sum_probs=84.0
Q ss_pred cCCceeEEEccCcc-cEE--e-c--CCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc-------eEEEEEcCCC
Q psy6570 5 SSGNVTRVKREMNL-KTV--L-S--NLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR-------KKRTLLNTGL 71 (713)
Q Consensus 5 ~~~~I~~~~~~~~~-~~~--~-~--~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~-------~~~~l~~~~~ 71 (713)
.++.|...++.... +.+ + . .......|++.+.+..|. +-. ..+.|.+.++... .....+....
T Consensus 32 ~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s---~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~ 107 (330)
T 2hes_X 32 TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGS---FDSTVSIWAKEESADRTFEMDLLAIIEGHE 107 (330)
T ss_dssp SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEE---TTSCEEEEEC-------CCCEEEEEEC---
T ss_pred CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEe---CCCcEEEEEcccCcCccccceeEEEEcCCC
Confidence 35666666665432 111 2 1 223457888988755554 444 4567777776421 1111222223
Q ss_pred CCcceEEEcCCCCcEEEEccCCCCeEEEEecC--CCCcEE--EEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC
Q psy6570 72 NEPYDIALEPLSGRMFWTELGIKPRISGASID--GKNKFN--LVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNG 147 (713)
Q Consensus 72 ~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d--G~~~~~--l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g 147 (713)
.....|++.|...+|+-.. ... .|..-+++ +...+. .+.........|++++....|..+. ..+.|...+...
T Consensus 108 ~~V~~v~~sp~g~~las~s-~D~-~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~D~~i~iW~~~~ 184 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATCS-RDK-SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS-YDDTVRIWKDYD 184 (330)
T ss_dssp -CEEEEEECTTSCEEEEEE-TTS-CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE-TTSCEEEEEEET
T ss_pred CcEEEEEECCCCCEEEEEe-CCC-EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECCC
Confidence 5677899998554444433 323 56666663 222222 2223344567899998666555443 445555554433
Q ss_pred CceeEEEecCCCCccceeeeeeC---CeEEEEeCCCCcEEEEcc
Q psy6570 148 KDRFVVYHTEDNGYKPYKLEVFE---DNLYFSTYRTNNILKINK 188 (713)
Q Consensus 148 ~~~~~~~~~~~~~~~p~~i~~~~---~~ly~td~~~~~i~~~~~ 188 (713)
...+.+............+++.. +.++++-...+.|...+.
T Consensus 185 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 185 DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 22122221111112234445442 234445445555655544
No 412
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.08 E-value=4.6 Score=46.40 Aligned_cols=149 Identities=12% Similarity=0.100 Sum_probs=86.5
Q ss_pred CCceEEEeccCCe-EEEeecCCCCCCeEEEEecCCceEEEEEcC----CCCCcceEEEcCCCCcEEEEccCCCCeEEEEe
Q psy6570 27 DPRGVAVDWVGKN-LYWTDAGGRSSNNIMVSTLEGRKKRTLLNT----GLNEPYDIALEPLSGRMFWTELGIKPRISGAS 101 (713)
Q Consensus 27 ~p~gla~D~~~~~-ly~td~~~~~~~~I~~~~~~G~~~~~l~~~----~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~ 101 (713)
.+.+|+.|.. ++ ||+.-. .+-|.+++.++...+.+... ....+..|+.|+ ++.|++... . .|.+.+
T Consensus 407 ~v~~i~~d~~-g~~lWigt~----~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~-Gl~~~~ 477 (795)
T 4a2l_A 407 NIKAVYVDEK-KSLVYIGTH----AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--S-ALVRFN 477 (795)
T ss_dssp CEEEEEEETT-TTEEEEEET----TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--S-CEEEEE
T ss_pred cEEEEEEcCC-CCEEEEEeC----cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--C-ceeEEe
Confidence 4567888854 66 666543 45688888876554444321 124567899985 677877664 2 588888
Q ss_pred cCCCCcEEEEeC----C--CCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEe--cCCCCc--cceeeeee-C
Q psy6570 102 IDGKNKFNLVDN----N--IQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYH--TEDNGY--KPYKLEVF-E 170 (713)
Q Consensus 102 ~dG~~~~~l~~~----~--~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~~--~p~~i~~~-~ 170 (713)
.+....+.+... . ......|..| ..++||++.. +-|++++.+.... .+.. ....+. ...+|..+ +
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 478 PEQRSFTTIEKEKDGTPVVSKQITTLFRD-SHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp TTTTEEEECCBCTTCCBCCCCCEEEEEEC-TTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTT
T ss_pred CCCCeEEEccccccccccCCceEEEEEEC-CCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCC
Confidence 765433332211 1 1345678888 5678888775 4688888765433 2221 111121 23455555 4
Q ss_pred CeEEEEeCCCCcEEEEcccC
Q psy6570 171 DNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 171 ~~ly~td~~~~~i~~~~~~~ 190 (713)
+.||++... .|.++++..
T Consensus 554 g~lWigT~~--Gl~~~d~~~ 571 (795)
T 4a2l_A 554 GIIWVGTRE--GFYCFNEKD 571 (795)
T ss_dssp SCEEEEESS--CEEEEETTT
T ss_pred CCEEEEeCC--CceeECCCC
Confidence 567666543 678887543
No 413
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.06 E-value=4.5 Score=46.20 Aligned_cols=158 Identities=10% Similarity=0.076 Sum_probs=90.7
Q ss_pred CceEEEe-ccCCeEEEeecC-CCCCCeEEEEecCCc-eEEEEEcCCCC-CcceEEEcCCCCcEEEEccCC--C-CeEEEE
Q psy6570 28 PRGVAVD-WVGKNLYWTDAG-GRSSNNIMVSTLEGR-KKRTLLNTGLN-EPYDIALEPLSGRMFWTELGI--K-PRISGA 100 (713)
Q Consensus 28 p~gla~D-~~~~~ly~td~~-~~~~~~I~~~~~~G~-~~~~l~~~~~~-~p~~iavD~~~~~ly~td~~~--~-~~I~~~ 100 (713)
..++++. +.++.|.++... ......|++.++++. .. +...+. ...+++..|.++.||++.... . .+|++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 3457788 777777665542 112235999999876 41 111111 134678887777787775431 1 379999
Q ss_pred ecCCCCc--EEEEeC-CCCCCeeEEEeCCCCeEEEEcC--CCCcEEEEeCCCCc--e--eEEEecCCCCccceeee-eeC
Q psy6570 101 SIDGKNK--FNLVDN-NIQWPTGITIDYPSQRLYWADP--KARTIESINLNGKD--R--FVVYHTEDNGYKPYKLE-VFE 170 (713)
Q Consensus 101 ~~dG~~~--~~l~~~-~~~~p~glavd~~~~~LY~~d~--~~~~I~~~~~~g~~--~--~~~~~~~~~~~~p~~i~-~~~ 170 (713)
++++... +.++.. .-..-.++++++++++|+|+.. ....|+.+++++.. . +.+.... ...-+.++ ..+
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~s~~~~~g 330 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE--KGVRYDVQMHGT 330 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC--TTCCEEEEEETT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC--CCceEEEeeeeC
Confidence 9977542 233332 2223457789988888888753 35579999987642 2 3332211 11113344 337
Q ss_pred CeEEEEeCC----CCcEEEEcccC
Q psy6570 171 DNLYFSTYR----TNNILKINKFG 190 (713)
Q Consensus 171 ~~ly~td~~----~~~i~~~~~~~ 190 (713)
+.||+.... ..+|++++..+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTS
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCC
Confidence 777776432 34688887653
No 414
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=92.03 E-value=0.033 Score=61.39 Aligned_cols=44 Identities=20% Similarity=0.545 Sum_probs=37.7
Q ss_pred eeCCCCcccCCCC-ccCCCCCCCCCCEEEcCCCeeeCCCCCccCCCC
Q psy6570 371 CHCAPSYTGARCE-SRICENKCHNGGTCIATTQTCVCPPGFTGDTCQ 416 (713)
Q Consensus 371 C~C~~G~~g~~C~-~~~C~~~C~~~~~C~~~~~~C~C~~g~~g~~C~ 416 (713)
..|.+||.|+.|. ...|...|.++|.|.+ +.|.|.+||+|..|.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~--G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ--GSCVCDEQWGGLYCD 564 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET--TEEEECTTEESTTSC
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC--CCEeeCCCccCCCcC
Confidence 3688999999998 4668888999999987 789999999998887
No 415
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=91.88 E-value=0.11 Score=37.65 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=25.3
Q ss_pred cEEeecC-CCceeeCCCCCc----CCCCCcCCCCCCCCCCCCC
Q psy6570 564 GTCVLIE-GKPSCKCLPPYS----GKQCTEREDSPSCHNYCDN 601 (713)
Q Consensus 564 ~~C~~~~-g~~~C~C~~G~~----G~~C~~~~~~~~C~~~C~~ 601 (713)
..|+++. |+|+|.|++||. |+.|.+.. ...|...|.+
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~-~~pC~~~c~n 52 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPAV-PFPCGRVSVS 52 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEESS-SSCTTCCCSC
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCCC-CCCCCCcccc
Confidence 3699988 699999999996 66777642 2344444433
No 416
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.71 E-value=1.3 Score=48.50 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=61.0
Q ss_pred CCCcceEEEcCCCCcEEEEccCC--------------------CCeEEEEecCCCCc-------EEEEe-----------
Q psy6570 71 LNEPYDIALEPLSGRMFWTELGI--------------------KPRISGASIDGKNK-------FNLVD----------- 112 (713)
Q Consensus 71 ~~~p~~iavD~~~~~ly~td~~~--------------------~~~I~~~~~dG~~~-------~~l~~----------- 112 (713)
+.+|.+|+++|.++.||++-.++ .++|++...++... ..++.
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 67899999999999999985432 25799987764321 11111
Q ss_pred ----------CCCCCCeeEEEeCCCCeEEEEc-CC-----------CCcEEEEeCCCCceeEEEecCCCCccceeeeee-
Q psy6570 113 ----------NNIQWPTGITIDYPSQRLYWAD-PK-----------ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF- 169 (713)
Q Consensus 113 ----------~~~~~p~glavd~~~~~LY~~d-~~-----------~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~- 169 (713)
..+..|.+|+||+. ++||+.+ .. ++.++.++.+......|+.... .....|+.+.
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-gaE~TG~~fsp 540 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSP 540 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECT
T ss_pred cccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-CccCcCeeECC
Confidence 12678999999964 5677764 32 2345555554334444433321 2233455443
Q ss_pred -CCeEEEE
Q psy6570 170 -EDNLYFS 176 (713)
Q Consensus 170 -~~~ly~t 176 (713)
+..||+.
T Consensus 541 Dg~tlfvn 548 (592)
T 3zwu_A 541 DQKTLFVG 548 (592)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 3355554
No 417
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.51 E-value=13 Score=37.60 Aligned_cols=153 Identities=7% Similarity=-0.033 Sum_probs=78.9
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC-
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK- 105 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~- 105 (713)
....+++.+..+.+.++-. ..+.|.+.++........+.. .....+|++++ ..++++..+ .|...++...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~---~d~~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~--~~~~~~~~~---~i~i~d~~~~~ 130 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTG---VKEVVHIWDDVKKQDVSRIKV-DAPVKDLFLSR--EFIVVSYGD---VISVFKFGNPW 130 (355)
T ss_dssp CCCEEEECTTSSEEEEECS---STTEEEEEETTTTEEEEEEEC-SSCEEEEEECS--SEEEEEETT---EEEEEESSTTC
T ss_pred CeEEEEEcCCCCEEEEEEC---CccEEEEEECCCCcEEEEEEC-CCceEEEEEcC--CEEEEEEcC---EEEEEECCCCc
Confidence 4555677666666655554 456888888754433222222 24566777764 344444322 6777776654
Q ss_pred C-cEEEEeCCCCCCee-EEEeCCCCeEEEE-cCCCCcEEEEeCCCCc-----------------eeEEEecCCCCcccee
Q psy6570 106 N-KFNLVDNNIQWPTG-ITIDYPSQRLYWA-DPKARTIESINLNGKD-----------------RFVVYHTEDNGYKPYK 165 (713)
Q Consensus 106 ~-~~~l~~~~~~~p~g-lavd~~~~~LY~~-d~~~~~I~~~~~~g~~-----------------~~~~~~~~~~~~~p~~ 165 (713)
. ...+.. |.+ +++.+ ..|.++ ....+.|...++.... ...+... ......
T Consensus 131 ~~~~~~~~-----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h---~~~v~~ 200 (355)
T 3vu4_A 131 KRITDDIR-----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH---TNPIKM 200 (355)
T ss_dssp CBSSCCEE-----EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCC---SSCEEE
T ss_pred eeeEEecc-----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc---CCceEE
Confidence 1 111111 333 34443 555554 4566777777776432 2222111 222345
Q ss_pred eeee-CCeEEEEeCCCCc-EEEEcccCCCcceeee
Q psy6570 166 LEVF-EDNLYFSTYRTNN-ILKINKFGNSDFNVLA 198 (713)
Q Consensus 166 i~~~-~~~ly~td~~~~~-i~~~~~~~~~~~~~~~ 198 (713)
+++. ++.++.+-...+. |...+...+.....+.
T Consensus 201 ~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp EEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 5554 3455566556666 7777766555444443
No 418
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.48 E-value=0.52 Score=42.71 Aligned_cols=31 Identities=23% Similarity=0.520 Sum_probs=25.9
Q ss_pred ccCCCCCCC-----CCCCCeeeccCCCceeeeCCCCcc
Q psy6570 219 VTNHCDDKP-----CHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 219 ~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
.+++|...+ | .+.|++.+|+|+|.|++||.+
T Consensus 123 di~eC~~~~~~~~~C--~~~C~n~~g~~~C~C~~Gy~l 158 (170)
T 1szb_A 123 DIDECQVAPGEAPTC--DHHCHNHLGGFYCSCRAGYVL 158 (170)
T ss_dssp ECCTTCCCTTSCCSS--SSEEEEETTEEEEECCTTEEE
T ss_pred ccCcccCCCCCCCcc--CCccccCCCCEEEeCCCCcEE
Confidence 357888654 7 568999999999999999984
No 419
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.32 E-value=0.087 Score=40.33 Aligned_cols=31 Identities=35% Similarity=1.019 Sum_probs=20.4
Q ss_pred CCCCCCCcEEeec--CCCceeeCCCCCcCCCCCc
Q psy6570 557 PNYCSNNGTCVLI--EGKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 557 ~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~C~~ 588 (713)
.+.|.+ |+|... .+.+.|.|.+||+|..|+.
T Consensus 45 ~~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 445655 478433 2467788888888888763
No 420
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.30 E-value=12 Score=36.70 Aligned_cols=117 Identities=9% Similarity=0.078 Sum_probs=62.6
Q ss_pred CCceEEEeccC-CeEEEeecCCCCCCeEEEEecCCce--EEEEEcCCCCCcceEEEcCCC------------CcEEEEcc
Q psy6570 27 DPRGVAVDWVG-KNLYWTDAGGRSSNNIMVSTLEGRK--KRTLLNTGLNEPYDIALEPLS------------GRMFWTEL 91 (713)
Q Consensus 27 ~p~gla~D~~~-~~ly~td~~~~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~iavD~~~------------~~ly~td~ 91 (713)
....|++.+.. +.++++-. ..+.|.+.++.... ...++.........+++.|.. +.++++-.
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s---~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs 177 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVAS---SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEE---TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE
T ss_pred ceeEEEeCcCCCCcEEEEEE---CCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc
Confidence 35677777652 34444444 46778888876432 112222223456677777642 34555543
Q ss_pred CCCCeEEEEecCCCCc-E---EEEeCCCCCCeeEEEeCCC--CeEEEEcCCCCcEEEEeCCC
Q psy6570 92 GIKPRISGASIDGKNK-F---NLVDNNIQWPTGITIDYPS--QRLYWADPKARTIESINLNG 147 (713)
Q Consensus 92 ~~~~~I~~~~~dG~~~-~---~l~~~~~~~p~glavd~~~--~~LY~~d~~~~~I~~~~~~g 147 (713)
... .|...+++.... . ..+.........|+++|.. +.++.+-...+.|...+++.
T Consensus 178 ~D~-~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 178 ADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp TTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred CCC-cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 333 555555544331 1 1222234456889999764 45555555566666666554
No 421
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.21 E-value=7.2 Score=40.35 Aligned_cols=169 Identities=14% Similarity=0.075 Sum_probs=89.3
Q ss_pred ceEEEecc-CCeEEEeecCCCCCCeEEEEecCCceEEEEEcCC----C--------CCcceEEEcCCC-CcEEEEccCCC
Q psy6570 29 RGVAVDWV-GKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG----L--------NEPYDIALEPLS-GRMFWTELGIK 94 (713)
Q Consensus 29 ~gla~D~~-~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~----~--------~~p~~iavD~~~-~~ly~td~~~~ 94 (713)
..|++|+. .+.||+... .+.|++.+-.|+.-+.+.... + ..+..|++|+.+ +.||+... .
T Consensus 180 ~~i~~d~~~~~~l~vg~~----~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~ 253 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMS----SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--C 253 (394)
T ss_dssp EEEEECTTCTTCEEEEEE----TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--T
T ss_pred eEEEECCCCCCEEEEEEC----CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--C
Confidence 47888874 467888754 345888776665543332110 0 135689999864 66777543 2
Q ss_pred CeEEEEecCCCCcEEEEeCCCC-----CCeeEEEeCC-CCeEEEEcC------------CCCcEEEEeCCCCceeEEEec
Q psy6570 95 PRISGASIDGKNKFNLVDNNIQ-----WPTGITIDYP-SQRLYWADP------------KARTIESINLNGKDRFVVYHT 156 (713)
Q Consensus 95 ~~I~~~~~dG~~~~~l~~~~~~-----~p~glavd~~-~~~LY~~d~------------~~~~I~~~~~~g~~~~~~~~~ 156 (713)
.|++..-.|..-+.+ ...+. ....|++|+. .+.||++-. ....|++..-.|..-+.+...
T Consensus 254 -gl~~s~D~G~tW~~~-~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g 331 (394)
T 3b7f_A 254 -GIYRMDRREGVWKRI-GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG 331 (394)
T ss_dssp -EEEEEETTTTEEECG-GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT
T ss_pred -eEEEeCCCCCcceEC-CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC
Confidence 688776444432222 21122 2245788764 467877621 123566544334444444321
Q ss_pred CCCCcc--------ceeeeee---CCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEEE
Q psy6570 157 EDNGYK--------PYKLEVF---EDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLIL 210 (713)
Q Consensus 157 ~~~~~~--------p~~i~~~---~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~ 210 (713)
++. ..+|+++ .+.||+.. ..+.|++-. +++...+.+...+.....|.+.
T Consensus 332 ---lp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 332 ---LPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp ---SCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred ---CCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 111 1234443 24577753 344566554 4566666666666655555544
No 422
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=90.75 E-value=0.091 Score=37.23 Aligned_cols=25 Identities=44% Similarity=0.846 Sum_probs=18.7
Q ss_pred EEeecCC-CceeeCCCCCc----CCCCCcC
Q psy6570 565 TCVLIEG-KPSCKCLPPYS----GKQCTER 589 (713)
Q Consensus 565 ~C~~~~g-~~~C~C~~G~~----G~~C~~~ 589 (713)
.|+++.| +|+|.|++||. |+.|.++
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPT 41 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccCC
Confidence 5888877 68888888886 5667664
No 423
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.64 E-value=15 Score=42.73 Aligned_cols=116 Identities=9% Similarity=0.004 Sum_probs=74.7
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCC
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG 104 (713)
...+..|++++.+..|.... ..+.|.+.+..+....... ..-.....|++.| +.+|+-.. ... .|..-+++.
T Consensus 17 ~~~V~~lafspdg~~lAsgs----~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s-~D~-~v~lWd~~~ 88 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIAT----VTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVIN-AKD-TVYVLSLYS 88 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEE----TTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEE-TTC-EEEEEETTT
T ss_pred CCCcEEEEECCCCCEEEEEe----CCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEE-CcC-eEEEEECCC
Confidence 34578899999876666554 4678999888765443332 2234578899998 44344443 333 677777765
Q ss_pred CCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCce
Q psy6570 105 KNKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDR 150 (713)
Q Consensus 105 ~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~ 150 (713)
......+. .-.....|++++...+|+.+. ..+.|...+++....
T Consensus 89 ~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 89 QKVLTTVF-VPGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQL 132 (902)
T ss_dssp CSEEEEEE-CSSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEE
T ss_pred CcEEEEEc-CCCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCcc
Confidence 44332222 224568899998888888775 456788888876543
No 424
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.63 E-value=0.082 Score=47.37 Aligned_cols=35 Identities=40% Similarity=0.915 Sum_probs=24.9
Q ss_pred CCCCCCCCCCcEEeecCCCceeeCCCCCcCCCCCc
Q psy6570 554 KCTPNYCSNNGTCVLIEGKPSCKCLPPYSGKQCTE 588 (713)
Q Consensus 554 ~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~ 588 (713)
.|.+.+|.+++.|.+..+.|.|.|.+||+|..|+.
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 45556676777777777777777777777777764
No 425
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.46 E-value=13 Score=41.93 Aligned_cols=15 Identities=7% Similarity=0.146 Sum_probs=13.0
Q ss_pred eeEEEeCCCCeEEEE
Q psy6570 119 TGITIDYPSQRLYWA 133 (713)
Q Consensus 119 ~glavd~~~~~LY~~ 133 (713)
.++|+|+.++.||+.
T Consensus 392 ~~~a~dp~~~~~yv~ 406 (689)
T 1yiq_A 392 QPMSYNPDTGLVYIP 406 (689)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CcceECCCCCEEEEe
Confidence 458999999999986
No 426
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.62 E-value=13 Score=40.92 Aligned_cols=76 Identities=4% Similarity=-0.035 Sum_probs=40.7
Q ss_pred eeEEEeCCCCeEEEEcC--------------------------------CCCcEEEEeCCCCceeEEEecCCCCccceee
Q psy6570 119 TGITIDYPSQRLYWADP--------------------------------KARTIESINLNGKDRFVVYHTEDNGYKPYKL 166 (713)
Q Consensus 119 ~glavd~~~~~LY~~d~--------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i 166 (713)
.++|+|+.++.||+... ..+.|..+|+......--..... ....-.+
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~ 493 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVL 493 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCE
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccce
Confidence 47899999999998632 13456666664322211111111 1111224
Q ss_pred eeeCCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 167 EVFEDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 167 ~~~~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
+..++.||+.+ ..+.++.++...++.+-.
T Consensus 494 ~tagglvf~g~-~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 494 ATAGNLVFTGT-GDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp EETTTEEEEEC-TTSEEEEEETTTCCEEEE
T ss_pred EeCCCEEEEEC-CCCcEEEEECCCCCEEEE
Confidence 44566777754 356677777665555433
No 427
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.60 E-value=16 Score=37.43 Aligned_cols=73 Identities=4% Similarity=-0.093 Sum_probs=44.4
Q ss_pred CCceEEEec-------cCCeEEEeecCCCCCCeEEEEecCCce-EEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEE
Q psy6570 27 DPRGVAVDW-------VGKNLYWTDAGGRSSNNIMVSTLEGRK-KRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRIS 98 (713)
Q Consensus 27 ~p~gla~D~-------~~~~ly~td~~~~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~ 98 (713)
....|++.+ ..++++.+-+ ..+.|.+-++.... ...+.. .-..+..+++.|.+..++++-.... .|.
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s---~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~-~v~ 212 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVG---DDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNG-NIR 212 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEE---TTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTS-EEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEE---CCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCC-EEE
Confidence 357788765 2456776766 67788888875433 333332 2356778999987666666544333 566
Q ss_pred EEecCC
Q psy6570 99 GASIDG 104 (713)
Q Consensus 99 ~~~~dG 104 (713)
..++..
T Consensus 213 ~wd~~t 218 (393)
T 4gq1_A 213 IFDWTL 218 (393)
T ss_dssp EEETTC
T ss_pred EEECCC
Confidence 666543
No 428
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.18 E-value=30 Score=38.07 Aligned_cols=16 Identities=6% Similarity=0.027 Sum_probs=13.6
Q ss_pred CeeEEEeCCCCeEEEE
Q psy6570 118 PTGITIDYPSQRLYWA 133 (713)
Q Consensus 118 p~glavd~~~~~LY~~ 133 (713)
..++|+|+.++.||+.
T Consensus 395 w~~~a~dp~~~~~yv~ 410 (599)
T 1w6s_A 395 QGHDSYDPKRELFFMG 410 (599)
T ss_dssp SCBCEEETTTTEEEEE
T ss_pred CCCccCCCCCCEEEEe
Confidence 3678999999999986
No 429
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.10 E-value=11 Score=39.61 Aligned_cols=97 Identities=5% Similarity=-0.176 Sum_probs=58.8
Q ss_pred CCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCC
Q psy6570 26 HDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGK 105 (713)
Q Consensus 26 ~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~ 105 (713)
..+.+|++.+..+.++.+-. ..+.|.+.++...............+..|++.|...+|+.... .. .|...++++.
T Consensus 150 ~~V~~v~~~p~~~~~las~s---~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-dg-~v~iwd~~~~ 224 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCL---ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-NG-TVVQYLPTLQ 224 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEE---TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-TS-CEEEECTTCC
T ss_pred CceEEEEECCCCCCEEEEEE---CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-CC-cEEEEccCCc
Confidence 45678999887666776666 5788999988765332222222356889999987666665553 33 6888888754
Q ss_pred CcEEEEeCC-CC-----CCeeEEEeCCC
Q psy6570 106 NKFNLVDNN-IQ-----WPTGITIDYPS 127 (713)
Q Consensus 106 ~~~~l~~~~-~~-----~p~glavd~~~ 127 (713)
...++.... .. ....|++++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 225 EKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp EEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred ccccccCCcccCCCCceeEEEEEEecCc
Confidence 443332111 11 33567777533
No 430
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=88.93 E-value=20 Score=35.69 Aligned_cols=153 Identities=7% Similarity=0.027 Sum_probs=74.3
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCce---EEEEEcC-CCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK---KRTLLNT-GLNEPYDIALEPLSGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~---~~~l~~~-~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d 103 (713)
...+++++ + ++++-. ..+.|.+.++.... ..++... .......|++.|...+|...... . .|..-+++
T Consensus 17 v~~~~~s~--~-~las~~---~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-~-~v~iw~~~ 88 (330)
T 2hes_X 17 IWSFDFSQ--G-ILATGS---TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-S-TVSIWAKE 88 (330)
T ss_dssp EEEEEEET--T-EEEEEE---SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-S-CEEEEEC-
T ss_pred eeeeccCC--C-EEEEEc---CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-C-cEEEEEcc
Confidence 45566654 3 444544 56788888876532 2222122 23457789999865545444332 2 45555543
Q ss_pred CCC-----cE--EEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC-C-CceeEEEecCCCCccceeeeee-CCeE
Q psy6570 104 GKN-----KF--NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN-G-KDRFVVYHTEDNGYKPYKLEVF-EDNL 173 (713)
Q Consensus 104 G~~-----~~--~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-g-~~~~~~~~~~~~~~~p~~i~~~-~~~l 173 (713)
... .. ..+.........|++++.+.+|..+ ...+.|...+++ + ...+.+............+++. .+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~-s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 167 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC-SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL 167 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEE-ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEE-eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCE
Confidence 211 11 1222233456789999876655544 345667777763 2 2222222211112223445544 3445
Q ss_pred EEEeCCCCcEEEEccc
Q psy6570 174 YFSTYRTNNILKINKF 189 (713)
Q Consensus 174 y~td~~~~~i~~~~~~ 189 (713)
+++-...+.|...+..
T Consensus 168 l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 168 LASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred EEEEcCCCeEEEEECC
Confidence 5555555666655543
No 431
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=88.67 E-value=0.29 Score=51.67 Aligned_cols=37 Identities=32% Similarity=0.761 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCcEEeecCCCceeeCCC-CCcCCCCCcC
Q psy6570 553 NKCTPNYCSNNGTCVLIEGKPSCKCLP-PYSGKQCTER 589 (713)
Q Consensus 553 ~~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~G~~C~~~ 589 (713)
+.|..++|.++|+|....++|.|.|+. ||.|..|+..
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 467788999999999999999999996 9999999853
No 432
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.66 E-value=20 Score=39.07 Aligned_cols=170 Identities=11% Similarity=0.067 Sum_probs=95.4
Q ss_pred CCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCC----CCcceEEEcCCCCcEEEEccCCCCeEEEE
Q psy6570 25 LHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGL----NEPYDIALEPLSGRMFWTELGIKPRISGA 100 (713)
Q Consensus 25 ~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~----~~p~~iavD~~~~~ly~td~~~~~~I~~~ 100 (713)
-..+.++++.+.+..|-.+.. .+.|.+.+.++ .... ..... .....|++.|.+++|+.+... . .|..-
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~----dg~V~iwd~~~-~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs~D-G-tVkIW 156 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN----NGNVSVFKDNK-MLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGNED-G-ELQFF 156 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET----TSCEEEEETTE-EEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEETT-S-EEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeC----CCcEEEEeCCc-eeee-ccCCCccccccEEEEEEcCCCCEEEEEcCC-C-EEEEE
Confidence 344678888887777766554 56777777555 2222 22111 136789999988888887643 2 57777
Q ss_pred ecCCCCc--------EEEE---eCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCcee----EEEecCCCCcccee
Q psy6570 101 SIDGKNK--------FNLV---DNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRF----VVYHTEDNGYKPYK 165 (713)
Q Consensus 101 ~~dG~~~--------~~l~---~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~----~~~~~~~~~~~p~~ 165 (713)
++.+... .++- .....+...|++.|++ +++-...+.|+..++++.... .+... . .....+
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~-h-~~~V~s 231 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNA-S-RRKITD 231 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECC-C-SSCCCC
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccc-c-cCcEEE
Confidence 7776542 2221 1123578899999765 445455677888888876632 23211 1 123455
Q ss_pred eeeeCCeEEEEeCCCCcEEEEcccCCCcceeeeccccccccEEE
Q psy6570 166 LEVFEDNLYFSTYRTNNILKINKFGNSDFNVLANNLNRASDVLI 209 (713)
Q Consensus 166 i~~~~~~ly~td~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v 209 (713)
+++.+..|..+ . .++|...+..++..............++.+
T Consensus 232 vaFsg~~LASa-~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 232 LKIVDYKVVLT-C-PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp EEEETTEEEEE-C-SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred EEEECCEEEEE-e-CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 56554444444 3 467777776544332333233333344433
No 433
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.60 E-value=31 Score=37.62 Aligned_cols=114 Identities=11% Similarity=0.120 Sum_probs=62.8
Q ss_pred ceEEEeccCCeEEEeecCCCCCCeEEEEec-CCceEEEEEcCCC----CCcceEEEcCCCCcEEEEccC----CCCeEEE
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTL-EGRKKRTLLNTGL----NEPYDIALEPLSGRMFWTELG----IKPRISG 99 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~~~~----~~p~~iavD~~~~~ly~td~~----~~~~I~~ 99 (713)
.+++++ +++||+... .++|+.++. +|+.+-..-.... ..-...+++ ++.||+...+ ..+.|+.
T Consensus 109 ~~~~~~--~~~v~v~~~----dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a 180 (571)
T 2ad6_A 109 RGLAYG--AGQIVKKQA----NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNA 180 (571)
T ss_dssp CCCEEE--TTEEEEECT----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEE
T ss_pred cccEEE--CCEEEEEeC----CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEE
Confidence 456765 678888764 567888886 5655433221110 001112232 5778887643 1237777
Q ss_pred EecC-CCCcEEEEeCCCC-----CC--------------------------------eeEEEeCCCCeEEEEcCC-----
Q psy6570 100 ASID-GKNKFNLVDNNIQ-----WP--------------------------------TGITIDYPSQRLYWADPK----- 136 (713)
Q Consensus 100 ~~~d-G~~~~~l~~~~~~-----~p--------------------------------~glavd~~~~~LY~~d~~----- 136 (713)
++.. |+.+-.+-..... .| ..+++|+..+.|||....
T Consensus 181 ~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~ 260 (571)
T 2ad6_A 181 FDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWN 260 (571)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCcccc
Confidence 7764 4443333211100 00 247899989999998632
Q ss_pred ----------CCcEEEEeCCCCce
Q psy6570 137 ----------ARTIESINLNGKDR 150 (713)
Q Consensus 137 ----------~~~I~~~~~~g~~~ 150 (713)
...|+.++.+...+
T Consensus 261 ~~~~~gd~~y~~~v~Ald~~tG~~ 284 (571)
T 2ad6_A 261 ETMRPGDNKWTMTIWGRDLDTGMA 284 (571)
T ss_dssp GGGSCSCCTTTTEEEEEETTTCCE
T ss_pred CCccCCCceeEEEEEEEecCCCcE
Confidence 13588888865443
No 434
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=88.54 E-value=0.78 Score=35.84 Aligned_cols=67 Identities=19% Similarity=0.574 Sum_probs=51.1
Q ss_pred CCCCCCCCCCcEEeec-CCCceeeCCCCCc--CCCCCcCCCCCCC---CCCCCCCCeEecCCCCcceeecCCCc
Q psy6570 554 KCTPNYCSNNGTCVLI-EGKPSCKCLPPYS--GKQCTEREDSPSC---HNYCDNAGLCSYSKQGKPVCTCVNGW 621 (713)
Q Consensus 554 ~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~--G~~C~~~~~~~~C---~~~C~~~g~C~~~~~g~~~C~C~~G~ 621 (713)
.|....|..++.|... .|.-.|+|..+|. |..|... ....| ...|+.++.|.......-.|+|+..+
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~-~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPA-PNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEEC-TTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcC-CCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 3544568889999986 5788999999997 6678764 22466 45799999998776467889999875
No 435
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.38 E-value=12 Score=37.12 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=65.7
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceE--EEEEcCCCCCcceEEEcCC-CCcEEEEccCCCCeEEEEecC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKK--RTLLNTGLNEPYDIALEPL-SGRMFWTELGIKPRISGASID 103 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~--~~l~~~~~~~p~~iavD~~-~~~ly~td~~~~~~I~~~~~d 103 (713)
....|++++.++.|. +-. ..+.|.+.++..... ...+.........|++.+. .+.++++-.... .|..-++.
T Consensus 15 ~V~~v~~s~~g~~la-sgs---~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~ 89 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLA-TCS---SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREE 89 (316)
T ss_dssp CEEEEEECGGGCEEE-EEE---TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCS
T ss_pred eEEEeeEcCCCCEEE-EEe---CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECC
Confidence 456789988765554 444 467888888764322 1122222356778888642 355555543333 56666665
Q ss_pred CCC-cEE-EEeCCCCCCeeEEEeCCC-CeEEEEcCCCCcEEEEeCCCC
Q psy6570 104 GKN-KFN-LVDNNIQWPTGITIDYPS-QRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 104 G~~-~~~-l~~~~~~~p~glavd~~~-~~LY~~d~~~~~I~~~~~~g~ 148 (713)
... ... .+.......+.|++.+.. +.++.+-...+.|...++...
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 432 222 222234456889999763 455555555666777666543
No 436
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.21 E-value=0.1 Score=34.95 Aligned_cols=11 Identities=18% Similarity=0.253 Sum_probs=4.4
Q ss_pred hhHHHHHHHHH
Q psy6570 685 HISSILILILL 695 (713)
Q Consensus 685 ~~~~~~~~~~~ 695 (713)
+.++++.++++
T Consensus 13 IA~gVVgGv~~ 23 (44)
T 2ks1_B 13 IATGMVGALLL 23 (44)
T ss_dssp STHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 34444443333
No 437
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=88.19 E-value=35 Score=38.04 Aligned_cols=134 Identities=10% Similarity=0.028 Sum_probs=71.4
Q ss_pred ceEEEeccCC-eEEEeecCC--CCCCeEEEEecCCceEEEEEcCCCCCc-ceEEEcCCCC-cEEEEccCCCCeEEEEecC
Q psy6570 29 RGVAVDWVGK-NLYWTDAGG--RSSNNIMVSTLEGRKKRTLLNTGLNEP-YDIALEPLSG-RMFWTELGIKPRISGASID 103 (713)
Q Consensus 29 ~gla~D~~~~-~ly~td~~~--~~~~~I~~~~~~G~~~~~l~~~~~~~p-~~iavD~~~~-~ly~td~~~~~~I~~~~~d 103 (713)
.+|++|+.+. +||++-... ...+.|++..-.|+.=+.+. .+ ..| ..|+++|.+. .||+.... . .|++. .|
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~-~p-~~~~~~l~~~P~~~~~l~a~~~~-~-gly~S-~D 167 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD-LP-FHPLTQMMYSPQNSDYLLALSTE-N-GLWVS-KN 167 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE-CS-SCBSSCCEEETTEEEEEEEEBTT-C-CEEEE-SS
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc-CC-CCCceEEEEecCCCCEEEEEECC-C-CEEEE-eC
Confidence 4799998654 788875310 02467888776665433333 22 233 3799998654 56666422 2 67775 45
Q ss_pred CCCcEEEEeCCCCCCeeEEEeCCCCeEEEEcCC-------CCc--EEEEeCCCCceeEEEecCCCCccceeeeeeCCeEE
Q psy6570 104 GKNKFNLVDNNIQWPTGITIDYPSQRLYWADPK-------ART--IESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLY 174 (713)
Q Consensus 104 G~~~~~l~~~~~~~p~glavd~~~~~LY~~d~~-------~~~--I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly 174 (713)
|...-..+...+. ...+. ..+.|||.-.. .++ |++-+-.|...+.+.. +..++++.+++|+
T Consensus 168 gG~TW~~i~~~v~---~~~f~-~~~~Iy~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~~------~i~~f~~~~~yl~ 237 (685)
T 3f6k_A 168 FGGKWEEIHKAVC---LAKWG-SDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGV------KIYSFGLGGRFLF 237 (685)
T ss_dssp TTSSEEEEESSEE---EEEEC-STTCEEEEECSSSCTTTTTTSEEEEEESSTTSSCEEEEE------EEEEEEEETTEEE
T ss_pred CCCCcEEeecCcc---ccccC-CCCeEEEEeeccccccCCCCceEEEEecCCCCCceEeec------cceeeeeeeeEEE
Confidence 5555444443332 23444 24678876322 122 2222222333333322 3356667788888
Q ss_pred EEe
Q psy6570 175 FST 177 (713)
Q Consensus 175 ~td 177 (713)
++.
T Consensus 238 va~ 240 (685)
T 3f6k_A 238 ASV 240 (685)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 438
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.16 E-value=0.13 Score=46.84 Aligned_cols=34 Identities=24% Similarity=0.629 Sum_probs=25.1
Q ss_pred CCCCCCCC-----CCCCcEEeecCCCceeeCCCCCc----CCCCC
Q psy6570 552 ANKCTPNY-----CSNNGTCVLIEGKPSCKCLPPYS----GKQCT 587 (713)
Q Consensus 552 ~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~----G~~C~ 587 (713)
+++|...+ |.+ .|.++.|+|+|.|++||+ |..|+
T Consensus 124 i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 124 IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 45666433 654 799999999999999998 44554
No 439
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.04 E-value=19 Score=38.85 Aligned_cols=167 Identities=4% Similarity=-0.136 Sum_probs=83.5
Q ss_pred CCCCceEEEecc-----CCeEEEeecCCCCCCeEEEEecCCceEE-----------EEEcCCCCCcceEEEcCCCCcEEE
Q psy6570 25 LHDPRGVAVDWV-----GKNLYWTDAGGRSSNNIMVSTLEGRKKR-----------TLLNTGLNEPYDIALEPLSGRMFW 88 (713)
Q Consensus 25 ~~~p~gla~D~~-----~~~ly~td~~~~~~~~I~~~~~~G~~~~-----------~l~~~~~~~p~~iavD~~~~~ly~ 88 (713)
...+..|++.+. .+.+..+-. ..+.|.+.+++..... ..+.........+++.+ .+.| +
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s---~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~l-a 281 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVS---QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTV-V 281 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEE---TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEE-E
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEe---cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeE-E
Confidence 344667777764 124444444 4567777777543210 01111124456777765 3444 4
Q ss_pred EccCCCCeEEEEecCCC-CcEEEEeCCCCCCeeEE--EeCCCC-eEEEEcCCCCcEEEEeCCCCc-eeEEEecCCCCccc
Q psy6570 89 TELGIKPRISGASIDGK-NKFNLVDNNIQWPTGIT--IDYPSQ-RLYWADPKARTIESINLNGKD-RFVVYHTEDNGYKP 163 (713)
Q Consensus 89 td~~~~~~I~~~~~dG~-~~~~l~~~~~~~p~gla--vd~~~~-~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~~~p 163 (713)
+-.... .|..-++... .....+.........|+ +. ..+ .++.+-...+.|...++.... ...+.... .....
T Consensus 282 sgs~Dg-tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s-~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v 358 (524)
T 2j04_B 282 CGFKNG-FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYS-DFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNL 358 (524)
T ss_dssp EEETTS-EEEEEETTBCSSCSEEEECSSSCEEEEEEECC-TTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSC
T ss_pred EEeCCC-EEEEEECCCCCCceEEeecccccEEEEEEEcC-CCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcc
Confidence 433333 7777777633 33333333344456673 34 333 677776677778887764322 22222211 11122
Q ss_pred eeeeeeC-CeEEEEeCCCCcEEEEcccCCCcceeeec
Q psy6570 164 YKLEVFE-DNLYFSTYRTNNILKINKFGNSDFNVLAN 199 (713)
Q Consensus 164 ~~i~~~~-~~ly~td~~~~~i~~~~~~~~~~~~~~~~ 199 (713)
..+++.. +..+++....+.|...+...+.....+..
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g 395 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS 395 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec
Confidence 3455543 44566655556677666554443333333
No 440
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.96 E-value=22 Score=35.07 Aligned_cols=180 Identities=8% Similarity=-0.054 Sum_probs=83.4
Q ss_pred CCceeEEEccCccc-EE--ec-CCCCCceEEEecc-CCeEEEeecCCCCCCeEEEEecCCce-EE-EEEcCCCCCcceEE
Q psy6570 6 SGNVTRVKREMNLK-TV--LS-NLHDPRGVAVDWV-GKNLYWTDAGGRSSNNIMVSTLEGRK-KR-TLLNTGLNEPYDIA 78 (713)
Q Consensus 6 ~~~I~~~~~~~~~~-~~--~~-~~~~p~gla~D~~-~~~ly~td~~~~~~~~I~~~~~~G~~-~~-~l~~~~~~~p~~ia 78 (713)
++.|...++..... .+ +. .-.....|++.+. .+.++++-. ..+.|.+.++.... .. ..+.........|+
T Consensus 34 D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s---~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 34 DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS---YDRKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE---TTSCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE---CCCEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 44555555543221 11 22 2234566777532 244444544 46778888876532 22 22222235678899
Q ss_pred EcCCC-CcEEEEccCCCCeEEEEecCCCCcEEEEe---CCCCCCeeEEEeCCC----------------CeEEEEcCCCC
Q psy6570 79 LEPLS-GRMFWTELGIKPRISGASIDGKNKFNLVD---NNIQWPTGITIDYPS----------------QRLYWADPKAR 138 (713)
Q Consensus 79 vD~~~-~~ly~td~~~~~~I~~~~~dG~~~~~l~~---~~~~~p~glavd~~~----------------~~LY~~d~~~~ 138 (713)
+.|.. +.++.+-.... .|...++.......+.. ........+++++.. ++++++-...+
T Consensus 111 ~~p~~~g~~lasgs~D~-~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~ 189 (316)
T 3bg1_A 111 WAPHDYGLILACGSSDG-AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN 189 (316)
T ss_dssp ECCTTTCSCEEEECSSS-CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS
T ss_pred ECCCCCCcEEEEEcCCC-CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC
Confidence 98763 55555543333 56666665443221111 111223456666542 23444444445
Q ss_pred cEEEEeCCCCc-eeEEEecCCCCccceeeeeeC-----CeEEEEeCCCCcEEEEccc
Q psy6570 139 TIESINLNGKD-RFVVYHTEDNGYKPYKLEVFE-----DNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 139 ~I~~~~~~g~~-~~~~~~~~~~~~~p~~i~~~~-----~~ly~td~~~~~i~~~~~~ 189 (713)
.|...++.... ...+...........++++.. +.++++-...+.|...+..
T Consensus 190 ~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 190 LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 55554544322 122222111111234455432 2455665566677666544
No 441
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.88 E-value=27 Score=36.02 Aligned_cols=154 Identities=8% Similarity=-0.024 Sum_probs=76.6
Q ss_pred CCCeEEEEecCCceEE-EEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCCc----EEEEeCCCCCCeeEEE
Q psy6570 49 SSNNIMVSTLEGRKKR-TLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKNK----FNLVDNNIQWPTGITI 123 (713)
Q Consensus 49 ~~~~I~~~~~~G~~~~-~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~~----~~l~~~~~~~p~glav 123 (713)
....|...+....... ..+.........+.+.+....|.... ..+ .|...++..... .............+++
T Consensus 207 ~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~-~D~-~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 207 RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-NDN-LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTS-CEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred CCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee-ccc-cceEEeeccccccceeeeeecccCCceeeeee
Confidence 3566666665543322 22223345567788876554444433 223 455555442211 1122223344577888
Q ss_pred eCCCCeEEEEc--CCCCcEEEEeCCCCceeEEEecCCCCccceeeeee--CCeEEEEe-CCCCcEEEEcccCCCcceeee
Q psy6570 124 DYPSQRLYWAD--PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF--EDNLYFST-YRTNNILKINKFGNSDFNVLA 198 (713)
Q Consensus 124 d~~~~~LY~~d--~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~--~~~ly~td-~~~~~i~~~~~~~~~~~~~~~ 198 (713)
.+....|+.+- ...+.|...++........... ......+.+. ++.|+.+. ...+.|..++...+..+..+.
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~ 361 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK 361 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC---SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCccccceeecc---ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc
Confidence 88777766553 3446777777765443333322 1233334433 44555543 245667777765555555444
Q ss_pred ccccccccE
Q psy6570 199 NNLNRASDV 207 (713)
Q Consensus 199 ~~~~~~~~i 207 (713)
.+...+..+
T Consensus 362 gH~~~V~~l 370 (420)
T 4gga_A 362 GHTSRVLSL 370 (420)
T ss_dssp CCSSCEEEE
T ss_pred CCCCCEEEE
Confidence 333333333
No 442
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.67 E-value=39 Score=37.66 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=61.2
Q ss_pred ceEEEeccCCeEEEeecCCCCCCeEEEEec-CCceEEEEEcCC----CCCcceEEEcCCCCcEEEEccC----CCCeEEE
Q psy6570 29 RGVAVDWVGKNLYWTDAGGRSSNNIMVSTL-EGRKKRTLLNTG----LNEPYDIALEPLSGRMFWTELG----IKPRISG 99 (713)
Q Consensus 29 ~gla~D~~~~~ly~td~~~~~~~~I~~~~~-~G~~~~~l~~~~----~~~p~~iavD~~~~~ly~td~~----~~~~I~~ 99 (713)
.+++++ +++||+... .++|+.++. +|+.+-...... .......+|+ ++.||+...+ ..+.|+.
T Consensus 111 ~~~~~~--~~~v~v~~~----dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a 182 (668)
T 1kv9_A 111 RGVALW--GDKVYVGTL----DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSA 182 (668)
T ss_dssp CCCEEE--BTEEEEECT----TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEE
T ss_pred cceEEE--CCEEEEEcC----CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEE
Confidence 556775 578888764 577888886 465543332211 0111122332 5677776543 1236777
Q ss_pred EecC-CCCcEEEEeCC-C-----------------------------CCCeeEEEeCCCCeEEEEcCCC-----------
Q psy6570 100 ASID-GKNKFNLVDNN-I-----------------------------QWPTGITIDYPSQRLYWADPKA----------- 137 (713)
Q Consensus 100 ~~~d-G~~~~~l~~~~-~-----------------------------~~p~glavd~~~~~LY~~d~~~----------- 137 (713)
++.. |+.+-.+-... . ..-..+++|+..++||+.....
T Consensus 183 ~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~ 262 (668)
T 1kv9_A 183 YDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPG 262 (668)
T ss_dssp EETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTT
T ss_pred EECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCC
Confidence 7763 44333332100 0 0002479999899999985321
Q ss_pred -------CcEEEEeCCCCcee
Q psy6570 138 -------RTIESINLNGKDRF 151 (713)
Q Consensus 138 -------~~I~~~~~~g~~~~ 151 (713)
..|+.++++.....
T Consensus 263 ~gd~l~~~~v~AlD~~tG~~~ 283 (668)
T 1kv9_A 263 GGDNLYLSSILAIRPDTGKLA 283 (668)
T ss_dssp CCCCTTTTEEEEECTTTCCEE
T ss_pred CCCceeeeeEEEEcCCCCcee
Confidence 25888887544433
No 443
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.28 E-value=19 Score=39.20 Aligned_cols=115 Identities=5% Similarity=-0.002 Sum_probs=75.1
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCce--------EEEEE---cCCCCCcceEEEcCCCCcEEEEccCCCCe
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK--------KRTLL---NTGLNEPYDIALEPLSGRMFWTELGIKPR 96 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~--------~~~l~---~~~~~~p~~iavD~~~~~ly~td~~~~~~ 96 (713)
..+|++.+.++.|+.+.. .+.|.+.++++.. ..++- .........|++.|. + | .+....+ .
T Consensus 132 v~svafSPDG~~LAsgs~----DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g-L-aass~D~-t 203 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNE----DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V-L-VAALSNN-S 203 (588)
T ss_dssp EEEEEECSSSSCEEEEET----TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E-E-EEEETTC-C
T ss_pred EEEEEEcCCCCEEEEEcC----CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC-c-E-EEEeCCC-e
Confidence 677999999888887764 6889999988763 23331 111357888999874 4 4 3333334 6
Q ss_pred EEEEecCCCCcE----EEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 97 ISGASIDGKNKF----NLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 97 I~~~~~dG~~~~----~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
|..-++++.... ++....-.....+++. ++.|-.+- .+.|...++.+.....+.
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~--~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC--PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC--SSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe--CCeEEEEECCCCeEEEEE
Confidence 777777776642 2322223457888997 46666554 478999998887664444
No 444
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.18 E-value=13 Score=42.29 Aligned_cols=110 Identities=14% Similarity=0.137 Sum_probs=62.4
Q ss_pred CcceEEEcCCCCcEEEE-ccCCCCeEEEEecCCCCcEEEEeCCC---CCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCC
Q psy6570 73 EPYDIALEPLSGRMFWT-ELGIKPRISGASIDGKNKFNLVDNNI---QWPTGITIDYPSQRLYWADPKARTIESINLNGK 148 (713)
Q Consensus 73 ~p~~iavD~~~~~ly~t-d~~~~~~I~~~~~dG~~~~~l~~~~~---~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~ 148 (713)
.+..|..|. +|.|++. ... . .|.+++.+....+.+....+ ..+..|..| ..++|+++-. +-|.+++....
T Consensus 473 ~i~~i~~d~-~g~lWi~~~t~-~-Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d-~~g~lWigt~--~Gl~~~~~~~~ 546 (758)
T 3ott_A 473 FINQIIPDN-EGNVWVLLYNN-K-GIDKINPRTREVTKLFADELTGEKSPNYLLCD-EDGLLWVGFH--GGVMRINPKDE 546 (758)
T ss_dssp CEEEEEECT-TSCEEEEETTC-S-SEEEEETTTTEEEEECTTTSCGGGCEEEEEEC-TTSCEEEEET--TEEEEECC--C
T ss_pred eeeeEEEcC-CCCEEEEccCC-C-CcEEEeCCCCceEEecCCCcCCCcccceEEEC-CCCCEEEEec--CceEEEecCCC
Confidence 467889985 6778762 222 3 58888876543333322112 346778888 5778888763 35888887654
Q ss_pred ceeEEEecCCCCccceeeeeeCCeEEEEeCCCCcEEEEcccC
Q psy6570 149 DRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNNILKINKFG 190 (713)
Q Consensus 149 ~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~i~~~~~~~ 190 (713)
..+.+...........+|..++++||++. .+.|.++++..
T Consensus 547 ~~~~~~~~gl~~~~i~~i~~~~g~lWi~t--~~Gl~~~~~~~ 586 (758)
T 3ott_A 547 SQQSISFGSFSNNEILSMTCVKNSIWVST--TNGLWIIDRKT 586 (758)
T ss_dssp CCCBCCCCC---CCEEEEEEETTEEEEEE--SSCEEEEETTT
T ss_pred ceEEecccCCCccceEEEEECCCCEEEEC--CCCeEEEcCCC
Confidence 33322111111123456666677887775 34578887653
No 445
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=87.00 E-value=1.9 Score=38.27 Aligned_cols=30 Identities=37% Similarity=0.801 Sum_probs=25.1
Q ss_pred cCCCCC---CCCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 220 TNHCDD---KPCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 220 ~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
+++|.. .+| .+.|.+.+++|+|.|++||.+
T Consensus 117 ~~eC~~~~~~~C--~~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 117 INECTDFVDVPC--SHFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp CCTTTC-CCCCS--SSEEEEETTEEEEECCTTCEE
T ss_pred CcccCCCCCCCC--CCcccCcCCCEEEecCCCcEE
Confidence 478875 257 679999999999999999984
No 446
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=86.08 E-value=17 Score=41.36 Aligned_cols=165 Identities=9% Similarity=0.044 Sum_probs=86.9
Q ss_pred CCCCCceEEEeccCC-eEEEeecCCCCCCeEEEEecCCceEEEEEc-C----------CCCCcceEEEcCCC-CcEEEEc
Q psy6570 24 NLHDPRGVAVDWVGK-NLYWTDAGGRSSNNIMVSTLEGRKKRTLLN-T----------GLNEPYDIALEPLS-GRMFWTE 90 (713)
Q Consensus 24 ~~~~p~gla~D~~~~-~ly~td~~~~~~~~I~~~~~~G~~~~~l~~-~----------~~~~p~~iavD~~~-~~ly~td 90 (713)
...+..+|++|+.+. .+|+.- ..+.|++..-.|+.=+.+.. . .......|++||.+ +.||++.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~----~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYART----DIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEE----SSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEe----ccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 455788999999874 555543 35678888777765333332 1 12346789999854 6777754
Q ss_pred c-----CCCCeEEEEecCCCCcEEEEeCCCC-------CC--eeEEEeCCC-CeEEEEcCCCCcEEEEeCCCCceeEEEe
Q psy6570 91 L-----GIKPRISGASIDGKNKFNLVDNNIQ-------WP--TGITIDYPS-QRLYWADPKARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 91 ~-----~~~~~I~~~~~dG~~~~~l~~~~~~-------~p--~glavd~~~-~~LY~~d~~~~~I~~~~~~g~~~~~~~~ 155 (713)
. +....|+|..-.|..=+.+.. .+. .. ..|++++.+ +.||... ....|++..=.|..-+.+..
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~~-~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~TW~~~~~ 172 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYRS-PVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRSTDRAQTWSRMNQ 172 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEEC-SSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEESSTTSSCEECTT
T ss_pred cccccCCCCceEEEECCCCCCceeccC-CcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEECCCCcCcccccc
Confidence 3 123467776555554444432 111 11 369999765 5677654 33567765433443333321
Q ss_pred cCCCC---ccceeeeee---CCeEEEEeCCCCcEEEEcccCCCcce
Q psy6570 156 TEDNG---YKPYKLEVF---EDNLYFSTYRTNNILKINKFGNSDFN 195 (713)
Q Consensus 156 ~~~~~---~~p~~i~~~---~~~ly~td~~~~~i~~~~~~~~~~~~ 195 (713)
..... .....|.++ .+.||++....+.|++-. +++...+
T Consensus 173 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~-DgG~tW~ 217 (763)
T 3a0f_A 173 LPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTW-DGGANWS 217 (763)
T ss_dssp SCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEES-SSSSSCE
T ss_pred CcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEEC-CCCCCcc
Confidence 11100 111233333 346777755433454443 3444333
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.87 E-value=0.16 Score=33.83 Aligned_cols=12 Identities=8% Similarity=0.199 Sum_probs=4.7
Q ss_pred hhHHHHHHHHHH
Q psy6570 685 HISSILILILLL 696 (713)
Q Consensus 685 ~~~~~~~~~~~~ 696 (713)
+.++++..++++
T Consensus 12 IA~gVVgGv~~v 23 (44)
T 2l2t_A 12 IAAGVIGGLFIL 23 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEEeehHHHHHH
Confidence 333444334333
No 448
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.83 E-value=27 Score=33.88 Aligned_cols=133 Identities=7% Similarity=-0.036 Sum_probs=63.9
Q ss_pred CCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCC-c---EEEEeCCCCCCeeEEEeCCCCeEEEE--cCCCCcEEEEe
Q psy6570 71 LNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKN-K---FNLVDNNIQWPTGITIDYPSQRLYWA--DPKARTIESIN 144 (713)
Q Consensus 71 ~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~-~---~~l~~~~~~~p~glavd~~~~~LY~~--d~~~~~I~~~~ 144 (713)
......+++.+....|+... ... .|...++.... . .............+++.+....+++. ....+.|...+
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGG-NDN-LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TTS-CEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred cCceEEEEEcCCCCEEEEEe-cCc-ceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 34566677776444444333 323 56555554221 1 11112223344667777766665543 33445676666
Q ss_pred CCCCceeEEEecCCCCccceeeee--eCCeEEEEe-CCCCcEEEEcccCCCcceeeeccccccccEE
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEV--FEDNLYFST-YRTNNILKINKFGNSDFNVLANNLNRASDVL 208 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~--~~~~ly~td-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 208 (713)
............. .....+.+ .++.++.+. ...+.|...+...+..+..+..+...+..++
T Consensus 228 ~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~ 291 (318)
T 4ggc_A 228 VCSGACLSAVDAH---SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 291 (318)
T ss_dssp TTTCCEEEEEECS---SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred cccccccccccce---eeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 6554443333221 12222232 345555443 3456777777666655555544433344443
No 449
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=84.30 E-value=58 Score=36.44 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=21.8
Q ss_pred eEEEeCCCCeEEEEcCCC------------------CcEEEEeCCCCce
Q psy6570 120 GITIDYPSQRLYWADPKA------------------RTIESINLNGKDR 150 (713)
Q Consensus 120 glavd~~~~~LY~~d~~~------------------~~I~~~~~~g~~~ 150 (713)
.+++|+..++||+..... ..|+.+|.+....
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~ 287 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY 287 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce
Confidence 589999899999875431 2488888764433
No 450
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=84.04 E-value=30 Score=35.41 Aligned_cols=53 Identities=8% Similarity=-0.154 Sum_probs=31.7
Q ss_pred CCceeEEEccCcc--cEEecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCCc
Q psy6570 6 SGNVTRVKREMNL--KTVLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR 61 (713)
Q Consensus 6 ~~~I~~~~~~~~~--~~~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~ 61 (713)
++.|...++.... ..+...-..+..+++.+.+.+++++-. ..+.|.+.++...
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~---~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE---RNGNIRIFDWTLN 219 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE---TTSEEEEEETTCC
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC---CCCEEEEEECCCC
Confidence 4455555654332 222334445678888887666666655 5678888887643
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.00 E-value=0.3 Score=32.66 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=15.4
Q ss_pred ccchhHHHHHHHHHHHHHHhheeeEEEEecC
Q psy6570 682 VNSHISSILILILLLITVGGIGYYIFRIKMS 712 (713)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (713)
+++-+++-+++++++++++.+++.++++++|
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 4444444444444554445555555555554
No 452
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.71 E-value=17 Score=41.36 Aligned_cols=147 Identities=10% Similarity=0.034 Sum_probs=79.9
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCC---CCcceEEEcCCCCcEEEEccCCCCeEEEEecCC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGL---NEPYDIALEPLSGRMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~---~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG 104 (713)
+..|..|. .++||+... ..+-|.+++++....+.+....+ ..+..|..| .+|.|+++.. . .|.+++.+.
T Consensus 474 i~~i~~d~-~g~lWi~~~---t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d-~~g~lWigt~--~-Gl~~~~~~~ 545 (758)
T 3ott_A 474 INQIIPDN-EGNVWVLLY---NNKGIDKINPRTREVTKLFADELTGEKSPNYLLCD-EDGLLWVGFH--G-GVMRINPKD 545 (758)
T ss_dssp EEEEEECT-TSCEEEEET---TCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEEC-TTSCEEEEET--T-EEEEECC--
T ss_pred eeeEEEcC-CCCEEEEcc---CCCCcEEEeCCCCceEEecCCCcCCCcccceEEEC-CCCCEEEEec--C-ceEEEecCC
Confidence 56688885 467776222 23458888887655554432222 356788898 5788887753 2 588887765
Q ss_pred CCcEEEEeCCC--CCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCc
Q psy6570 105 KNKFNLVDNNI--QWPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182 (713)
Q Consensus 105 ~~~~~l~~~~~--~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~ 182 (713)
...+.+....+ ....+|+.| .++|+++. .+-|.+++......+........+ ....+...++.||+.. .+.
T Consensus 546 ~~~~~~~~~gl~~~~i~~i~~~--~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~fG~--~~G 618 (758)
T 3ott_A 546 ESQQSISFGSFSNNEILSMTCV--KNSIWVST--TNGLWIIDRKTMDARQQNMTNKRF-TSLLFDPKEDCVYLGG--ADG 618 (758)
T ss_dssp CCCCBCCCCC---CCEEEEEEE--TTEEEEEE--SSCEEEEETTTCCEEEC--CCCCC-SEEEEETTTTEEEEEC--BSE
T ss_pred CceEEecccCCCccceEEEEEC--CCCEEEEC--CCCeEEEcCCCceeEEecCCCCce-eeeEEECCCCcEEEec--CCc
Confidence 44332211122 234566655 68888876 345888887654433221111111 1111122367888874 345
Q ss_pred EEEEccc
Q psy6570 183 ILKINKF 189 (713)
Q Consensus 183 i~~~~~~ 189 (713)
+.++++.
T Consensus 619 l~~f~p~ 625 (758)
T 3ott_A 619 FGISHSN 625 (758)
T ss_dssp EEEEEC-
T ss_pred eEEEChh
Confidence 6777664
No 453
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=83.29 E-value=36 Score=33.34 Aligned_cols=161 Identities=12% Similarity=0.080 Sum_probs=87.5
Q ss_pred CCceeEEEccCcccEEecCCCCCc---eEEEeccCCeEEEeecCC--CCCCeEEEEecCCceEEEEEcCCCCCcc---eE
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPR---GVAVDWVGKNLYWTDAGG--RSSNNIMVSTLEGRKKRTLLNTGLNEPY---DI 77 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~---gla~D~~~~~ly~td~~~--~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~i 77 (713)
.+.+.++++.+..-..+..+..|+ ++++ .+++||+.-... .....+.++++....-+.+. .+..|+ .+
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~ 164 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA--PMLTRRIGVGV 164 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECC--CCSSCCBSCEE
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECC--CCCccccceEE
Confidence 356777887765433334444442 3333 468899873210 12456889998765433332 222332 34
Q ss_pred EEcCCCCcEEEEccCC----CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcCC-----CCcEEEEeC
Q psy6570 78 ALEPLSGRMFWTELGI----KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADPK-----ARTIESINL 145 (713)
Q Consensus 78 avD~~~~~ly~td~~~----~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~~-----~~~I~~~~~ 145 (713)
++ .++.||+..-.. ...+++.+++...-+.+. .+..| ..+++. +++||+.-.. ...|+++++
T Consensus 165 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 165 AV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT--AMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp EE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC--CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred EE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC--CCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeC
Confidence 44 368899874211 236888887654333221 22222 233333 6889998532 467999998
Q ss_pred CCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 146 ~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
....-+.+..... .....++.+.+++||+.-
T Consensus 239 ~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~G 269 (308)
T 1zgk_A 239 ETETWTFVAPMKH-RRSALGITVHQGRIYVLG 269 (308)
T ss_dssp TTTEEEECCCCSS-CCBSCEEEEETTEEEEEC
T ss_pred CCCcEEECCCCCC-CccceEEEEECCEEEEEc
Confidence 7765544432211 222345666788888874
No 454
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.24 E-value=36 Score=33.25 Aligned_cols=173 Identities=8% Similarity=-0.037 Sum_probs=94.3
Q ss_pred CCceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecC---CCCCCeEEEEecCCceEEEEEcCCCCCcc---e
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAG---GRSSNNIMVSTLEGRKKRTLLNTGLNEPY---D 76 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~---~~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~ 76 (713)
.+.+.++++....-..+..+..| .++++ .+++||+.-.. ......++++++....-+.+. .+..|+ .
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~ 144 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP--SMLTQRCSHG 144 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC--CCSSCCBSCE
T ss_pred cceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC--CCcCCcceeE
Confidence 45677778776543333444444 23333 46889986431 113467999998876544432 233332 2
Q ss_pred EEEcCCCCcEEEEccC----C----CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcC-----CCCcE
Q psy6570 77 IALEPLSGRMFWTELG----I----KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADP-----KARTI 140 (713)
Q Consensus 77 iavD~~~~~ly~td~~----~----~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~-----~~~~I 140 (713)
+++ .++.||+..-. . ...+++.++....-+.+. .+..| ..+++. +++||+.-. ....|
T Consensus 145 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~ 218 (306)
T 3ii7_A 145 MVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC--PMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNV 218 (306)
T ss_dssp EEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCE
T ss_pred EEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC--CccchhhcceEEEE--CCEEEEEeCCCCCCCCceE
Confidence 333 36789987421 1 236888888765433332 22222 233333 678999842 23578
Q ss_pred EEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC-----CCcEEEEccc
Q psy6570 141 ESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR-----TNNILKINKF 189 (713)
Q Consensus 141 ~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~-----~~~i~~~~~~ 189 (713)
+++++....-+.+..... .....++.+.+++||+.-.. .+.|++++..
T Consensus 219 ~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSPMPW-KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EEEETTTTEEEECCCCSC-CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETT
T ss_pred EEeeCCCCcEEECCCCCC-CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 999987665444432211 22334566678899987542 2445556543
No 455
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.20 E-value=0.57 Score=49.34 Aligned_cols=36 Identities=25% Similarity=0.742 Sum_probs=31.1
Q ss_pred CCCCCCCCCCcEEcCCCCCeeccCCC-CCCCCCCccc
Q psy6570 507 KCDTCTCLNGGTCIPNSKNNVCKCPS-QYTGRRCECA 542 (713)
Q Consensus 507 ~C~~~~C~~~g~C~~~~~~~~C~C~~-g~~G~~C~~~ 542 (713)
.|...||.++|+|.+....|.|.|+. +|.|..|+..
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 46667999999999988899999996 9999999853
No 456
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.67 E-value=61 Score=35.52 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=23.2
Q ss_pred eEEEeCCCCeEEEEcCC---------------CCcEEEEeCCCCcee
Q psy6570 120 GITIDYPSQRLYWADPK---------------ARTIESINLNGKDRF 151 (713)
Q Consensus 120 glavd~~~~~LY~~d~~---------------~~~I~~~~~~g~~~~ 151 (713)
.+++|+..++||+.... ...|+.++.+.....
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence 57899999999998643 247888887654443
No 457
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=81.38 E-value=42 Score=32.82 Aligned_cols=174 Identities=11% Similarity=0.085 Sum_probs=91.9
Q ss_pred CCceeEEEccCcccEEecCCCCCc---eEEEeccCCeEEEeecC----C--CCCCeEEEEecCCceEEEEEcCCCCCcc-
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPR---GVAVDWVGKNLYWTDAG----G--RSSNNIMVSTLEGRKKRTLLNTGLNEPY- 75 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~---gla~D~~~~~ly~td~~----~--~~~~~I~~~~~~G~~~~~l~~~~~~~p~- 75 (713)
...+.++++....-..+..+..|+ ++++ .++.||+.-.. . ...+.+.++++....-+.+. .+..|+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~ 113 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA--PMSVPRN 113 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC--CCSSCCB
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC--CCCcCcc
Confidence 356777887765433334444442 3433 46889986431 0 12356888988765543332 233333
Q ss_pred --eEEEcCCCCcEEEEccC----CCCeEEEEecCCCCcEEEEeCCC-CCCeeEEEeCCCCeEEEEcC-----CCCcEEEE
Q psy6570 76 --DIALEPLSGRMFWTELG----IKPRISGASIDGKNKFNLVDNNI-QWPTGITIDYPSQRLYWADP-----KARTIESI 143 (713)
Q Consensus 76 --~iavD~~~~~ly~td~~----~~~~I~~~~~dG~~~~~l~~~~~-~~p~glavd~~~~~LY~~d~-----~~~~I~~~ 143 (713)
.+++ .++.||+..-. ....+++.++....-+.+..... ..-..+++. +++||+.-. ..+.++++
T Consensus 114 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 189 (308)
T 1zgk_A 114 RIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECY 189 (308)
T ss_dssp TCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEE
T ss_pred ccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEE
Confidence 3333 36789987421 11268888876543332221111 111233333 689999842 24679999
Q ss_pred eCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC-----CCcEEEEcc
Q psy6570 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR-----TNNILKINK 188 (713)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~-----~~~i~~~~~ 188 (713)
++....-+.+..... .....++.+.+++||+.-.. ...|++++.
T Consensus 190 d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 190 YPERNEWRMITAMNT-IRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp ETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eCCCCeEeeCCCCCC-ccccceEEEECCEEEEEeCCCCCCccceEEEEeC
Confidence 987665544432211 22234556668889987432 234555554
No 458
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=80.98 E-value=44 Score=37.80 Aligned_cols=118 Identities=13% Similarity=0.040 Sum_probs=69.0
Q ss_pred CCceEEEeccC-CeEEEeecCCCCCCeEEEEecCCceEEEEEcC-C-----CCCcceEEEcCCC-CcEEEEccC------
Q psy6570 27 DPRGVAVDWVG-KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNT-G-----LNEPYDIALEPLS-GRMFWTELG------ 92 (713)
Q Consensus 27 ~p~gla~D~~~-~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~-~-----~~~p~~iavD~~~-~~ly~td~~------ 92 (713)
+..+|++++.+ +.||+.- ..+.|++.+-.|+.=+.+... . ......|++||.+ +.||++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~----~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARA----AIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEEC----SSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEEEe----cCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 78899999875 5666543 346799988777654444321 1 1235689999854 678876421
Q ss_pred C-CCeEEEEecCCCCcEEEEeCCCC---------CCeeEEEeCCC-CeEEEEcCCCCcEEEEeCCCCc
Q psy6570 93 I-KPRISGASIDGKNKFNLVDNNIQ---------WPTGITIDYPS-QRLYWADPKARTIESINLNGKD 149 (713)
Q Consensus 93 ~-~~~I~~~~~dG~~~~~l~~~~~~---------~p~glavd~~~-~~LY~~d~~~~~I~~~~~~g~~ 149 (713)
. ...|+|..-.|..=+.+.. .+. ....|++||.+ +.||........|++..=.|..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~-~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~t 166 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTIL-PFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVT 166 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEEC-SSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSS
T ss_pred cCCccEEEeCCCCCCcccCCC-CcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcc
Confidence 1 2367777555554444432 111 12579999875 5677765222456654433433
No 459
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=80.87 E-value=43 Score=32.61 Aligned_cols=163 Identities=7% Similarity=-0.024 Sum_probs=89.9
Q ss_pred CCceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecCC-CCCCeEEEEecCCceEEEEEcCCCCCcc---eEE
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAGG-RSSNNIMVSTLEGRKKRTLLNTGLNEPY---DIA 78 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~~-~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~ia 78 (713)
.+.+.++++....-..+..+..| .++++ .++.||+.-... ...+.+.++++....-+.+.. +..|+ .++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG--PPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC--CSSCCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC--CCccccceeEE
Confidence 35677888877553333444443 23333 468898864311 134678999987765444432 22222 233
Q ss_pred EcCCCCcEEEEccC-----CCCeEEEEecCCCCcEEEEeCCCC-CCeeEEEeCCCCeEEEEcC-----C----CCcEEEE
Q psy6570 79 LEPLSGRMFWTELG-----IKPRISGASIDGKNKFNLVDNNIQ-WPTGITIDYPSQRLYWADP-----K----ARTIESI 143 (713)
Q Consensus 79 vD~~~~~ly~td~~-----~~~~I~~~~~dG~~~~~l~~~~~~-~p~glavd~~~~~LY~~d~-----~----~~~I~~~ 143 (713)
+ .++.||+..-. ....+++.++....=+.+...... .-..+++. +++||+.-. . .+.++++
T Consensus 99 ~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~y 174 (306)
T 3ii7_A 99 A--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVY 174 (306)
T ss_dssp E--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEE
T ss_pred E--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEe
Confidence 3 36789986421 123688888876543333221111 11223333 679999742 1 5679999
Q ss_pred eCCCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
++....-+.+..... .....++.+.+++||+.-
T Consensus 175 d~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~G 207 (306)
T 3ii7_A 175 DPATETWTELCPMIE-ARKNHGLVFVKDKIFAVG 207 (306)
T ss_dssp ETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEC
T ss_pred CCCCCeEEECCCccc-hhhcceEEEECCEEEEEe
Confidence 987765555543221 223345666688898873
No 460
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=80.35 E-value=43 Score=32.28 Aligned_cols=156 Identities=11% Similarity=0.002 Sum_probs=81.8
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCce-E---EEEEcCCCCCcceEEEcCCCCcEEEEccC-CCCeEEEEe
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRK-K---RTLLNTGLNEPYDIALEPLSGRMFWTELG-IKPRISGAS 101 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~-~---~~l~~~~~~~p~~iavD~~~~~ly~td~~-~~~~I~~~~ 101 (713)
....+++.+.+..|+ +-. ..+.|.+.++.... . .............++..+....++++..+ ....|...+
T Consensus 152 ~~~~~~~~~~~~~l~-s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLA-SGG---NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp CEEEEEECTTSSEEE-EEE---TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred ceEEEEEcCCCCEEE-EEe---cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 344555555444443 333 35667666654321 1 11111222345677777777776654333 233566666
Q ss_pred cCCCCcEEEEeCCCCCCeeEEEeCCCCeEEEEc-CCCCcEEEEeCCCCceeEEEecCCCCccceeeeee-CCeEEEEeCC
Q psy6570 102 IDGKNKFNLVDNNIQWPTGITIDYPSQRLYWAD-PKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYR 179 (713)
Q Consensus 102 ~dG~~~~~l~~~~~~~p~glavd~~~~~LY~~d-~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~ 179 (713)
........... .......+++.+..+.|+.+- ...+.|...++........+.. ....-..|++. ++.++++-..
T Consensus 228 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 228 VCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEET
T ss_pred ccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEec
Confidence 65544433332 344567888888888887764 3567788888764433222222 12223455554 3444555555
Q ss_pred CCcEEEEccc
Q psy6570 180 TNNILKINKF 189 (713)
Q Consensus 180 ~~~i~~~~~~ 189 (713)
.+.|+..+.+
T Consensus 305 D~~v~iWd~~ 314 (318)
T 4ggc_A 305 DETLRLWRCF 314 (318)
T ss_dssp TTEEEEECCS
T ss_pred CCeEEEEECC
Confidence 5666655543
No 461
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=80.14 E-value=50 Score=32.82 Aligned_cols=151 Identities=11% Similarity=0.050 Sum_probs=70.9
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecC-CceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecCCCC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLE-GRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASIDGKN 106 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~dG~~ 106 (713)
..+|++++. +.+|.... .+.|++..-. |..-+.+....-.....|++++ ++.||..... +.|++...|+..
T Consensus 165 ~~~~~~~~~-~~~~~~g~----~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~-~g~~~~~~~~--G~~~~s~~D~G~ 236 (327)
T 2xbg_A 165 MRNLNRSPS-GEYVAVSS----RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTP-DGRLWMIVNG--GKIAFSDPDNSE 236 (327)
T ss_dssp EEEEEECTT-SCEEEEET----TSSEEEEECTTCSSCEEEECCSSSCEEEEEECT-TSCEEEEETT--TEEEEEETTEEE
T ss_pred eEEEEEcCC-CcEEEEEC----CCcEEEEeCCCCCceeECCCCCCCccceeEECC-CCCEEEEeCC--ceEEEecCCCCC
Confidence 456777654 45554433 4567776544 4443333322234566788886 4566655432 256665455322
Q ss_pred cEEEEeCC-CC---CCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEEeCCCCc
Q psy6570 107 KFNLVDNN-IQ---WPTGITIDYPSQRLYWADPKARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYRTNN 182 (713)
Q Consensus 107 ~~~l~~~~-~~---~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~~~~ 182 (713)
.-+.+... +. ....|++++ .+.||++.. .+.|++..-.|..-+.+.........-..|.+..+..+|+-...+.
T Consensus 237 tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~ 314 (327)
T 2xbg_A 237 NWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGI 314 (327)
T ss_dssp EECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTE
T ss_pred eeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCce
Confidence 11111111 11 124566664 456776643 3456544323444333322110011224455543434455455667
Q ss_pred EEEEcc
Q psy6570 183 ILKINK 188 (713)
Q Consensus 183 i~~~~~ 188 (713)
|++.+.
T Consensus 315 i~~~~~ 320 (327)
T 2xbg_A 315 LLRYVT 320 (327)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 777653
No 462
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=80.05 E-value=1.2 Score=54.23 Aligned_cols=42 Identities=31% Similarity=0.775 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCCCCcEEeecCCCceeeCC-CCCcCCCCCcC
Q psy6570 548 CASLANKCTPNYCSNNGTCVLIEGKPSCKCL-PPYSGKQCTER 589 (713)
Q Consensus 548 c~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~G~~C~~~ 589 (713)
|....+.|..++|.++|+|.....+|.|.|+ +||+|..|+..
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 4433467888889888999888888899998 59999888753
No 463
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=79.62 E-value=42 Score=38.35 Aligned_cols=165 Identities=12% Similarity=0.039 Sum_probs=86.4
Q ss_pred CCCCceEEEeccC-CeEEEeecCCCCCCeEEEEecCCceEEEEEcCC------CCCcceEEEcCCC-CcEEEEccCCC--
Q psy6570 25 LHDPRGVAVDWVG-KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTG------LNEPYDIALEPLS-GRMFWTELGIK-- 94 (713)
Q Consensus 25 ~~~p~gla~D~~~-~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~------~~~p~~iavD~~~-~~ly~td~~~~-- 94 (713)
..+..+|++++.+ +.||+.- ..+.|++.+-.|+.=+.+.... .....+|++||.+ +.||++-....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~----~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYART----DIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEE----SSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCCCCEEEEEe----cCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 3577889999865 5566543 3567888887776544333211 1346789999854 56777643211
Q ss_pred --CeEEEEecCCCCcEEEEeCCCC---------CCeeEEEeCCCC-eEEEEcCCCCcEEEEeCCCCceeEEEecCC---C
Q psy6570 95 --PRISGASIDGKNKFNLVDNNIQ---------WPTGITIDYPSQ-RLYWADPKARTIESINLNGKDRFVVYHTED---N 159 (713)
Q Consensus 95 --~~I~~~~~dG~~~~~l~~~~~~---------~p~glavd~~~~-~LY~~d~~~~~I~~~~~~g~~~~~~~~~~~---~ 159 (713)
..|++..-.|..=+.+ ...+. ....|++++.+. +||+.. ....|++..=.|..-+.+..... .
T Consensus 90 ~~~~v~~S~DgG~TW~~~-~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~DgG~TW~~~~~~~~~~~~ 167 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIY-ESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSSDRAKTWTNVTSIPDAFTN 167 (789)
T ss_dssp SCCEEEEESSTTSEEEEE-ECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEESSTTSSCEEETTSCCCCST
T ss_pred cccEEEEECCCCCcceec-cCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEECCCCcccCCCccCccccCC
Confidence 3677775444433333 22211 124699998654 555543 34567765544544444432110 0
Q ss_pred Cccceeeeee---CCeEEEEeCCCCcEEEEcccCCCccee
Q psy6570 160 GYKPYKLEVF---EDNLYFSTYRTNNILKINKFGNSDFNV 196 (713)
Q Consensus 160 ~~~p~~i~~~---~~~ly~td~~~~~i~~~~~~~~~~~~~ 196 (713)
...-..|.++ .+.||+.......|++- .+++...+.
T Consensus 168 ~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S-~DgG~TW~~ 206 (789)
T 1sqj_A 168 GIGYTSVIFDPERNGTIYASATAPQGMYVT-HDGGVSWEP 206 (789)
T ss_dssp TTCEEEEEECTTSTTCEEEEESSTTCEEEE-SSTTSSCEE
T ss_pred CCCeEEEEECCCCCCEEEEEEcCCCeEEEE-cCCCcCccc
Confidence 0111233332 34677765543555543 344444443
No 464
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=79.15 E-value=0.45 Score=31.74 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=13.8
Q ss_pred cccchhHHHHHHHHHHHHHHhheeeEEEEecC
Q psy6570 681 YVNSHISSILILILLLITVGGIGYYIFRIKMS 712 (713)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (713)
...+.+.++++++ ++++++.+++.++|+++|
T Consensus 12 IA~gVVgGv~~v~-ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 12 IAAGVIGGLFILV-IVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHTTCSSCC
T ss_pred EEEeehHHHHHHH-HHHHHHHHHhhhhhhhhc
Confidence 3344444444444 444444444444444433
No 465
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=79.01 E-value=49 Score=32.09 Aligned_cols=163 Identities=11% Similarity=0.067 Sum_probs=89.6
Q ss_pred CCceeEEEccCcc---cEEecCCCCC---ceEEEeccCCeEEEeecCC--CCCCeEEEEecCCceEEEEEcCCCCC-cce
Q psy6570 6 SGNVTRVKREMNL---KTVLSNLHDP---RGVAVDWVGKNLYWTDAGG--RSSNNIMVSTLEGRKKRTLLNTGLNE-PYD 76 (713)
Q Consensus 6 ~~~I~~~~~~~~~---~~~~~~~~~p---~gla~D~~~~~ly~td~~~--~~~~~I~~~~~~G~~~~~l~~~~~~~-p~~ 76 (713)
.+.+.++++.... -..+..+..| .++++ .+++||+.-... ...+.+.++++....-+.+......+ -..
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 154 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAG 154 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCE
T ss_pred CceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccce
Confidence 4567788877654 3333444443 23333 368899874311 12457999998775544443222111 123
Q ss_pred EEEcCCCCcEEEEccC----CCCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcCC-----CCcEEEEe
Q psy6570 77 IALEPLSGRMFWTELG----IKPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADPK-----ARTIESIN 144 (713)
Q Consensus 77 iavD~~~~~ly~td~~----~~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~~-----~~~I~~~~ 144 (713)
+++ .++.||+..-. ....+++.++....-+.+. .+..| ..+++. +++||+.-.. .+.|++++
T Consensus 155 ~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd 228 (301)
T 2vpj_A 155 LVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT--PMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYN 228 (301)
T ss_dssp EEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEE
T ss_pred EEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC--CCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEe
Confidence 333 36789987421 1136888888765433332 22222 223333 6789998532 46799999
Q ss_pred CCCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
+....-+.+..... .....++.+.+++||+.-
T Consensus 229 ~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~G 260 (301)
T 2vpj_A 229 IRTDSWTTVTSMTT-PRCYVGATVLRGRLYAIA 260 (301)
T ss_dssp TTTTEEEEECCCSS-CCBSCEEEEETTEEEEEC
T ss_pred CCCCcEEECCCCCC-cccceeEEEECCEEEEEc
Confidence 87765555533211 222345566688898874
No 466
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=78.88 E-value=0.89 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=25.5
Q ss_pred cCCCCCC-CCCCCCeeeccCCCceeeeCCCCcc
Q psy6570 220 TNHCDDK-PCHQSALCINLPSSHTCLCPDHLTE 251 (713)
Q Consensus 220 ~~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~~ 251 (713)
.|||..+ +-+..+.|.++.++|+|.|++||..
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l 34 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRL 34 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEE
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCccc
Confidence 5899865 3233899999999999999999973
No 467
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=77.91 E-value=0.2 Score=31.45 Aligned_cols=6 Identities=17% Similarity=0.390 Sum_probs=2.3
Q ss_pred hHHHHH
Q psy6570 686 ISSILI 691 (713)
Q Consensus 686 ~~~~~~ 691 (713)
+++++.
T Consensus 11 aagVvg 16 (35)
T 1iij_A 11 IATVVG 16 (35)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 468
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=76.39 E-value=58 Score=31.54 Aligned_cols=174 Identities=9% Similarity=0.014 Sum_probs=94.9
Q ss_pred CCceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecCC--CCCCeEEEEecCCce---EEEEEcCCCCCcc--
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAGG--RSSNNIMVSTLEGRK---KRTLLNTGLNEPY-- 75 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~~--~~~~~I~~~~~~G~~---~~~l~~~~~~~p~-- 75 (713)
...+.++++.+..-..+..+..| .++++ .++.||+.-... ...+.++++++.... -+.+. .+..|+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~--~~p~~r~~ 105 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA--PMNVRRGL 105 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC--CCSSCCBS
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC--CCCCCccc
Confidence 45678888877553333444444 23333 468898864311 124678999987654 33332 222222
Q ss_pred -eEEEcCCCCcEEEEccCC----CCeEEEEecCCCCcEEEEeCCCC-CCeeEEEeCCCCeEEEEcC-----CCCcEEEEe
Q psy6570 76 -DIALEPLSGRMFWTELGI----KPRISGASIDGKNKFNLVDNNIQ-WPTGITIDYPSQRLYWADP-----KARTIESIN 144 (713)
Q Consensus 76 -~iavD~~~~~ly~td~~~----~~~I~~~~~dG~~~~~l~~~~~~-~p~glavd~~~~~LY~~d~-----~~~~I~~~~ 144 (713)
.+++ .++.||+..-.. ...+++.++....-+.+...... .-..+++. +++||+.-. ....+++++
T Consensus 106 ~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d 181 (301)
T 2vpj_A 106 AGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYD 181 (301)
T ss_dssp CEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEE
T ss_pred eeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEe
Confidence 3343 368899874211 13688888876544444332211 11233333 688999842 246799999
Q ss_pred CCCCceeEEEecCCCCccceeeeeeCCeEEEEeCC-----CCcEEEEcc
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFSTYR-----TNNILKINK 188 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td~~-----~~~i~~~~~ 188 (713)
+....-+.+..... .....++.+.+++||+.-.. .+.|++++.
T Consensus 182 ~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 182 PHTGHWTNVTPMAT-KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp TTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCCcEEeCCCCCc-ccccceEEEECCEEEEEeCCCCCcccceEEEEeC
Confidence 87766555532211 22234566678889987432 234555554
No 469
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=75.68 E-value=4.5 Score=31.65 Aligned_cols=68 Identities=19% Similarity=0.420 Sum_probs=46.7
Q ss_pred CCCCCCCeEecCCCCcceeecCCCcc--cCCCCcCC--CCC---CCCCCCCeecCCCCccCCC-CCceeeCCCCc-----
Q psy6570 597 NYCDNAGLCSYSKQGKPVCTCVNGWS--GITCSERV--SCA---HFCFNGGTCREQNYSLDPD-LKPICICPRGY----- 663 (713)
Q Consensus 597 ~~C~~~g~C~~~~~g~~~C~C~~G~~--G~~C~~~~--~C~---~~C~~~~~C~~~~~~~~~~-~~~~C~C~~Gy----- 663 (713)
..|..++.|.....+.-.|+|..||. |..|.... .|. .-|..++.|.. .. ..-.|.|...|
T Consensus 10 tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~------~~~~kIvC~C~~~~~~~~~ 83 (95)
T 1b9w_A 10 TNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKM------NDKNEIVCKCTKEGSEPLF 83 (95)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEE------CTTSCEEEECCSTTEEEEG
T ss_pred CCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceee------cCCCcEEEECCCCCCCcce
Confidence 35777899998777888999999997 55676533 465 23555666655 23 34689999874
Q ss_pred ccCCCCc
Q psy6570 664 AGVRCQT 670 (713)
Q Consensus 664 ~G~~C~~ 670 (713)
.|..|+.
T Consensus 84 ~gvf~~~ 90 (95)
T 1b9w_A 84 EGVFCSH 90 (95)
T ss_dssp GGTEEEE
T ss_pred eeEEecc
Confidence 5666643
No 470
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=75.63 E-value=0.68 Score=29.94 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=7.6
Q ss_pred ccchhHHHHHHHHH
Q psy6570 682 VNSHISSILILILL 695 (713)
Q Consensus 682 ~~~~~~~~~~~~~~ 695 (713)
+.+.++++++..++
T Consensus 9 s~GaIAGiVvG~v~ 22 (38)
T 2k1k_A 9 TGGEIVAVIFGLLL 22 (38)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHH
Confidence 44556666655443
No 471
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=73.70 E-value=1.2 Score=29.42 Aligned_cols=14 Identities=21% Similarity=0.482 Sum_probs=6.0
Q ss_pred chhHHHHHHHHHHH
Q psy6570 684 SHISSILILILLLI 697 (713)
Q Consensus 684 ~~~~~~~~~~~~~~ 697 (713)
.++.+++.++++++
T Consensus 14 ~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 14 AVIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHHH
Confidence 33444444444443
No 472
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=72.72 E-value=74 Score=31.08 Aligned_cols=158 Identities=12% Similarity=0.011 Sum_probs=85.9
Q ss_pred eeEEEccCcccEEecCCCCCc---eEEEeccCCeEEEeecC-----CCCCCeEEEEecCCceEEEEEcCCCCCcc---eE
Q psy6570 9 VTRVKREMNLKTVLSNLHDPR---GVAVDWVGKNLYWTDAG-----GRSSNNIMVSTLEGRKKRTLLNTGLNEPY---DI 77 (713)
Q Consensus 9 I~~~~~~~~~~~~~~~~~~p~---gla~D~~~~~ly~td~~-----~~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~i 77 (713)
+.++++.+..-..+..+..|+ ++++ .+++||+.-.. ....+.+.++++....=+.+. .+..|+ .+
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~ 144 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD--PLPYVVYGHTV 144 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC--CCSSCCBSCEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC--CCCCcccceeE
Confidence 667777665433334444442 3444 46889986431 123467999998765433332 233333 23
Q ss_pred EEcCCCCcEEEEccC-C----CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcCC-----CCcEEEEe
Q psy6570 78 ALEPLSGRMFWTELG-I----KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADPK-----ARTIESIN 144 (713)
Q Consensus 78 avD~~~~~ly~td~~-~----~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~~-----~~~I~~~~ 144 (713)
++ .++.||+..-. . ...+++.++....=+.+. .+..| .++++. +++||+.-.. .+.+++++
T Consensus 145 ~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 145 LS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA--PMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp EE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC--CCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEE
T ss_pred EE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC--CCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEE
Confidence 43 46789987522 1 136888887654322222 22222 233333 6789997521 23688888
Q ss_pred CCCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
+....-+.+..... .....++.+.+++||+.-
T Consensus 219 ~~~~~W~~~~~~p~-~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 219 ITDNKWAPFEAFPQ-ERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp TTTTEEEEECCCSS-CCBSCEEEEETTEEEEEE
T ss_pred CCCCeEEECCCCCC-cccceeEEEECCEEEEEC
Confidence 87665555543211 223345666788898874
No 473
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=72.64 E-value=80 Score=31.45 Aligned_cols=164 Identities=10% Similarity=0.008 Sum_probs=83.2
Q ss_pred CCceeEEEccCcccEEecCCC-CCc---eEEEeccCCeEEEeecCCC---------------------------------
Q psy6570 6 SGNVTRVKREMNLKTVLSNLH-DPR---GVAVDWVGKNLYWTDAGGR--------------------------------- 48 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~-~p~---gla~D~~~~~ly~td~~~~--------------------------------- 48 (713)
.+.+.++++...+-..+..+. .|+ ++++ .+++||+.-....
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAE 162 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGG
T ss_pred eccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccc
Confidence 456788888776533333333 332 2333 5689998653110
Q ss_pred ---CCCeEEEEecCCceEEEEEcCCCC-Cc-ceEEEcCCCCcEEEEccC-----CCCeEEEEecCCCC-cEEEEeCCCCC
Q psy6570 49 ---SSNNIMVSTLEGRKKRTLLNTGLN-EP-YDIALEPLSGRMFWTELG-----IKPRISGASIDGKN-KFNLVDNNIQW 117 (713)
Q Consensus 49 ---~~~~I~~~~~~G~~~~~l~~~~~~-~p-~~iavD~~~~~ly~td~~-----~~~~I~~~~~dG~~-~~~l~~~~~~~ 117 (713)
..+.++++++....=+.+...... .- .++++ .++.||+..-. ....+++.++|-.. .-..+ ..+..
T Consensus 163 ~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~-~~~~~ 239 (357)
T 2uvk_A 163 DYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL-APVSS 239 (357)
T ss_dssp GGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEEEECC---CEEEEC-CCSST
T ss_pred ccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec-CCCCC
Confidence 136799999876554444322211 11 34454 36889887421 01257777764322 22222 22322
Q ss_pred Ce---e--EEEeCCCCeEEEEcCCC----------------------CcEEEEeCCCCceeEEEecCCCCccceeeeeeC
Q psy6570 118 PT---G--ITIDYPSQRLYWADPKA----------------------RTIESINLNGKDRFVVYHTEDNGYKPYKLEVFE 170 (713)
Q Consensus 118 p~---g--lavd~~~~~LY~~d~~~----------------------~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~ 170 (713)
|. + +++ .+++||+.-... ..+++++++...-+.+..... .....+..+.+
T Consensus 240 ~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~ 316 (357)
T 2uvk_A 240 PDGVAGGFAGI--SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ-GRAYGVSLPWN 316 (357)
T ss_dssp TTCCBSCEEEE--ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS-CCBSSEEEEET
T ss_pred CcccccceEEE--ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC-CcccceeEEeC
Confidence 32 2 333 367899875311 257888887655555543322 12223455568
Q ss_pred CeEEEEe
Q psy6570 171 DNLYFST 177 (713)
Q Consensus 171 ~~ly~td 177 (713)
++||+.-
T Consensus 317 ~~i~v~G 323 (357)
T 2uvk_A 317 NSLLIIG 323 (357)
T ss_dssp TEEEEEE
T ss_pred CEEEEEe
Confidence 8888863
No 474
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=72.52 E-value=81 Score=31.44 Aligned_cols=76 Identities=7% Similarity=-0.077 Sum_probs=41.6
Q ss_pred CCCCCCeeEEEeCCCCeEEEEcCCCCc-EEEEeCCC-CceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEEEEccc
Q psy6570 113 NNIQWPTGITIDYPSQRLYWADPKART-IESINLNG-KDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNILKINKF 189 (713)
Q Consensus 113 ~~~~~p~glavd~~~~~LY~~d~~~~~-I~~~~~~g-~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~~~~~~ 189 (713)
........|++++.+.+|. +-...+. |...++.. .....+..... ......+++. ++.++.+-...+.|...+..
T Consensus 193 ~h~~~v~~~~~s~~g~~l~-s~s~d~~~v~iwd~~~~~~~~~~~~g~h-~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVA-TCSQDGTIIRVFKTEDGVLVREFRRGLD-RADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCSSCEEEEEECTTSSEEE-EEETTCSEEEEEETTTCCEEEEEECTTC-CSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred ccCCceEEEEECCCCCEEE-EEeCCCCEEEEEECCCCcEEEEEEcCCC-CCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 3445668999998655554 4445566 88888764 33333331101 2233555654 34455555556677766654
Q ss_pred C
Q psy6570 190 G 190 (713)
Q Consensus 190 ~ 190 (713)
.
T Consensus 271 ~ 271 (355)
T 3vu4_A 271 N 271 (355)
T ss_dssp C
T ss_pred C
Confidence 3
No 475
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=72.48 E-value=1.3e+02 Score=34.06 Aligned_cols=121 Identities=15% Similarity=0.113 Sum_probs=65.0
Q ss_pred CCceEEEeccC-CeEEEeecCCCCC----CeEEEEecCCceEEEEEcC-CC-----C--CcceEEEcCCCC-cEEEEccC
Q psy6570 27 DPRGVAVDWVG-KNLYWTDAGGRSS----NNIMVSTLEGRKKRTLLNT-GL-----N--EPYDIALEPLSG-RMFWTELG 92 (713)
Q Consensus 27 ~p~gla~D~~~-~~ly~td~~~~~~----~~I~~~~~~G~~~~~l~~~-~~-----~--~p~~iavD~~~~-~ly~td~~ 92 (713)
...+|++|+.+ +.||++-.. .. ..|++..-.|+.=+.+... .+ . ....|+++|.+. .||+.. .
T Consensus 65 ~i~~ia~dp~~~~~i~~~~g~--~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~ 141 (789)
T 1sqj_A 65 GTESIALDPNNPDRLYLAQGR--YVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-R 141 (789)
T ss_dssp SEEEEEEETTEEEEEEEEECS--CTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-S
T ss_pred ceeEEEECCCCCCEEEEEeCc--cCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-c
Confidence 46789999743 567776431 12 6788877667554433221 11 0 235799998754 455543 2
Q ss_pred CCCeEEEEecCCCCcEEEEeC-----CCCCCeeEEEeCCC-CeEEEEcCCCCcEEEEeCCCCcee
Q psy6570 93 IKPRISGASIDGKNKFNLVDN-----NIQWPTGITIDYPS-QRLYWADPKARTIESINLNGKDRF 151 (713)
Q Consensus 93 ~~~~I~~~~~dG~~~~~l~~~-----~~~~p~glavd~~~-~~LY~~d~~~~~I~~~~~~g~~~~ 151 (713)
.. .|++..-.|..=+.+... .-.....|++|+.+ +.||++......|++-.=.|..-+
T Consensus 142 ~~-gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~ 205 (789)
T 1sqj_A 142 TE-GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWE 205 (789)
T ss_dssp SS-CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCE
T ss_pred cC-CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcc
Confidence 23 677655444433333210 00223567888754 578887654356666443344333
No 476
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=72.44 E-value=73 Score=30.85 Aligned_cols=161 Identities=11% Similarity=0.083 Sum_probs=88.7
Q ss_pred CCceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecCC--CCCCeEEEEecCCceEEEEEcCCCCCcc---eE
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAGG--RSSNNIMVSTLEGRKKRTLLNTGLNEPY---DI 77 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~~--~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~i 77 (713)
...+.++++...+-..+..+..| .++++ .+++||+.-... ...+.+.++++....-+.+. .+..|+ .+
T Consensus 76 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~ 151 (302)
T 2xn4_A 76 VRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA--PMNTRRSSVGV 151 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC--CCSSCCBSCEE
T ss_pred ccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC--CCCCcccCceE
Confidence 35677788776553334444444 33443 468899864311 12346888888765544432 233333 33
Q ss_pred EEcCCCCcEEEEccC---C---CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcCC-----CCcEEEE
Q psy6570 78 ALEPLSGRMFWTELG---I---KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADPK-----ARTIESI 143 (713)
Q Consensus 78 avD~~~~~ly~td~~---~---~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~~-----~~~I~~~ 143 (713)
++ .++.||+..-. . ...+++.++....=+.+. .+..| ..+++. +++||+.-.. .+.|+++
T Consensus 152 ~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~y 225 (302)
T 2xn4_A 152 GV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA--EMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVY 225 (302)
T ss_dssp EE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEE
T ss_pred EE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC--CCccccccccEEEE--CCEEEEECCCCCCcccceEEEE
Confidence 44 36789987421 0 126888888654333332 22221 233333 6899998532 4579999
Q ss_pred eCCCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 144 NLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
++....-+.+..... .....++.+.+++||+.-
T Consensus 226 d~~~~~W~~~~~~~~-~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 226 DPTTNAWRQVADMNM-CRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp ETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEC
T ss_pred eCCCCCEeeCCCCCC-ccccCeEEEECCEEEEEC
Confidence 987765555543221 222345666788888874
No 477
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=72.43 E-value=1.1e+02 Score=34.59 Aligned_cols=119 Identities=14% Similarity=0.083 Sum_probs=62.6
Q ss_pred CCceEEEecc-CCeEEEeecCC-----CCCCeEEEEecCCceEEEEEcC-CC--C-----CcceEEEcCCC-CcEEEEcc
Q psy6570 27 DPRGVAVDWV-GKNLYWTDAGG-----RSSNNIMVSTLEGRKKRTLLNT-GL--N-----EPYDIALEPLS-GRMFWTEL 91 (713)
Q Consensus 27 ~p~gla~D~~-~~~ly~td~~~-----~~~~~I~~~~~~G~~~~~l~~~-~~--~-----~p~~iavD~~~-~~ly~td~ 91 (713)
....|++|+. .+.||++-... .....|++..-.|+.=+.+... .+ . ....|++||.+ +.||....
T Consensus 73 ~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 73 GVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred CcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 3568999984 46888874310 0135688877666553333321 11 1 12579999876 56666542
Q ss_pred CCCCeEEEEecCCCCcEEEEeC---CCC-------------CCeeEEEeCCC-------CeEEEEcCCC-CcEEEEeCCC
Q psy6570 92 GIKPRISGASIDGKNKFNLVDN---NIQ-------------WPTGITIDYPS-------QRLYWADPKA-RTIESINLNG 147 (713)
Q Consensus 92 ~~~~~I~~~~~dG~~~~~l~~~---~~~-------------~p~glavd~~~-------~~LY~~d~~~-~~I~~~~~~g 147 (713)
... .|++..-.|..=+.+... .+. .-..|++|+.. .+||++.... ..|++. .||
T Consensus 153 ~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~Dg 230 (737)
T 2cn3_A 153 CGN-GLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDG 230 (737)
T ss_dssp TTC-CEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SST
T ss_pred cCC-cEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCC
Confidence 212 577654444333322110 000 01237787643 4899886433 356664 454
No 478
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=74.77 E-value=0.76 Score=29.30 Aligned_cols=23 Identities=30% Similarity=0.307 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHhheeeEEEEe
Q psy6570 688 SILILILLLITVGGIGYYIFRIK 710 (713)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~ 710 (713)
+++++++++++.+++++++.+||
T Consensus 13 avlal~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 13 AILALVVLTIISLIILIMLWQKK 35 (39)
Confidence 33333333333333444444443
No 479
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=71.43 E-value=60 Score=33.13 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=64.6
Q ss_pred CceEEEeccC-CeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCC-----CcceEEEcCC-CCcEEEEcc---------
Q psy6570 28 PRGVAVDWVG-KNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLN-----EPYDIALEPL-SGRMFWTEL--------- 91 (713)
Q Consensus 28 p~gla~D~~~-~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~-----~p~~iavD~~-~~~ly~td~--------- 91 (713)
+..|++|+.+ +.||+... ..|++.+..|+.-+.+. ..+. ....|++||. .+.||+.-.
T Consensus 234 ~~~i~~~~~~~~~l~vg~~-----~gl~~s~D~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~ 307 (394)
T 3b7f_A 234 PHCVVQHPAAPDILYQQNH-----CGIYRMDRREGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRV 307 (394)
T ss_dssp EEEEEECSSSTTEEEEEET-----TEEEEEETTTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCC
T ss_pred eeEEEECCCCCCEEEEEcC-----CeEEEeCCCCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceee
Confidence 4678898764 66776543 45888876665543332 2121 2346888874 456777521
Q ss_pred --CCCCeEEEEecCCCCcEEEEeCCCCC--------CeeEEEeCCC-CeEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 92 --GIKPRISGASIDGKNKFNLVDNNIQW--------PTGITIDYPS-QRLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 92 --~~~~~I~~~~~dG~~~~~l~~~~~~~--------p~glavd~~~-~~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
+....|++..-.|..-+.+ ...+.. ..+|++|+.+ +.||+.. ..+.|++..-.|..-+.+.
T Consensus 308 ~~~~~~~~~~S~DgG~tW~~~-~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~ 379 (394)
T 3b7f_A 308 SPGGKPAVYVTRDAGESWQRQ-DRGLPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASADEGEHWQCIA 379 (394)
T ss_dssp BCCSSCCEEEESSTTSCCEEE-CBTSCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEESSTTSBCEEEE
T ss_pred cCCCceeEEEECCCCCCceEC-CCCCCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEECCCCCCceEcc
Confidence 1122566654334443333 222322 1468888755 4577753 3345776655565555444
No 480
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=70.95 E-value=2.1 Score=51.92 Aligned_cols=37 Identities=35% Similarity=0.736 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCcEEeecCCCceeeCC-CCCcCCCCCc
Q psy6570 552 ANKCTPNYCSNNGTCVLIEGKPSCKCL-PPYSGKQCTE 588 (713)
Q Consensus 552 ~~~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~G~~C~~ 588 (713)
.+.|.++||.++|+|.....+|.|.|+ +||.|..|+.
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 468899999999999999899999999 7999999975
No 481
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.56 E-value=87 Score=30.97 Aligned_cols=159 Identities=9% Similarity=0.011 Sum_probs=77.9
Q ss_pred CCceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCCCCcceEEEcCCCCcEEEEccCCCCeEEEEecC-CC
Q psy6570 27 DPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGLNEPYDIALEPLSGRMFWTELGIKPRISGASID-GK 105 (713)
Q Consensus 27 ~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~~~p~~iavD~~~~~ly~td~~~~~~I~~~~~d-G~ 105 (713)
.+..|++.. .+++|++-. .+.|++..-.|+.=+.+.........+|++++. +.+|..... +.|++..-+ |.
T Consensus 123 ~~~~i~~~~-~~~~~~~~~----~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g~~--G~~~~S~d~gG~ 194 (327)
T 2xbg_A 123 SPRLIKALG-NGSAEMITN----VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPS-GEYVAVSSR--GSFYSTWEPGQT 194 (327)
T ss_dssp CEEEEEEEE-TTEEEEEET----TCCEEEESSTTSSEEEEECSCCCCEEEEEECTT-SCEEEEETT--SSEEEEECTTCS
T ss_pred CeEEEEEEC-CCCEEEEeC----CccEEEEcCCCCCCEEeecCCCcceEEEEEcCC-CcEEEEECC--CcEEEEeCCCCC
Confidence 345666543 466776543 456777665565544443322335667888874 555554422 267777644 44
Q ss_pred CcEEEEeCCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCC-CCceeEEEecCC-CCccceeeeee-CCeEEEEeCCCCc
Q psy6570 106 NKFNLVDNNIQWPTGITIDYPSQRLYWADPKARTIESINLN-GKDRFVVYHTED-NGYKPYKLEVF-EDNLYFSTYRTNN 182 (713)
Q Consensus 106 ~~~~l~~~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~-g~~~~~~~~~~~-~~~~p~~i~~~-~~~ly~td~~~~~ 182 (713)
.-+.+....-.....|++++ .++||++.. .+.|++...| |..-+.+..... ....-++|++. ++.+|++.. .+.
T Consensus 195 tW~~~~~~~~~~~~~~~~~~-~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~ 271 (327)
T 2xbg_A 195 AWEPHNRTTSRRLHNMGFTP-DGRLWMIVN-GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA 271 (327)
T ss_dssp SCEEEECCSSSCEEEEEECT-TSCEEEEET-TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC
T ss_pred ceeECCCCCCCccceeEECC-CCCEEEEeC-CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCe
Confidence 44444222223456788875 456665543 3556654445 332222211100 00112344443 456666543 344
Q ss_pred EEEEcccCCCcceee
Q psy6570 183 ILKINKFGNSDFNVL 197 (713)
Q Consensus 183 i~~~~~~~~~~~~~~ 197 (713)
|++- .+++...+.+
T Consensus 272 i~~S-~DgG~tW~~~ 285 (327)
T 2xbg_A 272 LLCS-QDGGQTWQQD 285 (327)
T ss_dssp EEEE-SSTTSSCEEC
T ss_pred EEEe-CCCCcccEEc
Confidence 5443 3455554444
No 482
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=70.17 E-value=63 Score=31.63 Aligned_cols=158 Identities=12% Similarity=-0.074 Sum_probs=82.1
Q ss_pred CCceeEEEccCcccEEecCCCCCc---eEEEeccCCeEEEeecC---CCCCCeEEEEecCCceEEEEEcCCCCCcc---e
Q psy6570 6 SGNVTRVKREMNLKTVLSNLHDPR---GVAVDWVGKNLYWTDAG---GRSSNNIMVSTLEGRKKRTLLNTGLNEPY---D 76 (713)
Q Consensus 6 ~~~I~~~~~~~~~~~~~~~~~~p~---gla~D~~~~~ly~td~~---~~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~ 76 (713)
.+.+.++++.+.+-..+..+..|+ ++++ .+++||+.-.. ....+.+.++++....=+.+. .+..|+ .
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~ 191 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA--PMQTARSLFG 191 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC--CCSSCCBSCE
T ss_pred cceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC--CCCCchhceE
Confidence 456788888775433334444442 3333 56889987531 112467999998765433332 233333 3
Q ss_pred EEEcCCCCcEEEEccCCC----CeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcCC-------------
Q psy6570 77 IALEPLSGRMFWTELGIK----PRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADPK------------- 136 (713)
Q Consensus 77 iavD~~~~~ly~td~~~~----~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~~------------- 136 (713)
+++ .++.||+..-... ..+++.++....=+.+. .+..| .++++- +++||+.-..
T Consensus 192 ~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~ 265 (315)
T 4asc_A 192 ATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE--AFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPT 265 (315)
T ss_dssp EEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEE
T ss_pred EEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECC--CCCCcccceeEEEE--CCEEEEECCccccCcCCcccccc
Confidence 333 3678888742211 25777877654333332 22222 223333 6788887421
Q ss_pred -CCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEE
Q psy6570 137 -ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176 (713)
Q Consensus 137 -~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~t 176 (713)
.+.|+++++....-+.+... .....++++.+++||+.
T Consensus 266 ~~~~v~~yd~~~~~W~~~~~~---~r~~~~~~~~~~~l~v~ 303 (315)
T 4asc_A 266 ELNDIWRYNEEEKKWEGVLRE---IAYAAGATFLPVRLNVL 303 (315)
T ss_dssp EEEEEEEEETTTTEEEEEESC---SSCCSSCEEEEEEECGG
T ss_pred ccCcEEEecCCCChhhhhccC---CcCccceEEeCCEEEEE
Confidence 23467777765544444221 22334555566666653
No 483
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.99 E-value=90 Score=30.51 Aligned_cols=157 Identities=10% Similarity=0.053 Sum_probs=82.2
Q ss_pred CceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecC---CCCCCeEEEEecCCceEEEEEcCCCCCcc---eE
Q psy6570 7 GNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAG---GRSSNNIMVSTLEGRKKRTLLNTGLNEPY---DI 77 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~---~~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~i 77 (713)
..+.++++.+.+-..+..+..| .++++ .+++||+.-.. ....+.++++++....=+.+. .+..|+ ++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~ 202 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA--PMKTPRSMFGV 202 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC--CCSSCCBSCEE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC--CCCCCcccceE
Confidence 4566777776543333344443 33444 46889986421 112467999998775544332 233333 34
Q ss_pred EEcCCCCcEEEEccCC----CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcC--------------C
Q psy6570 78 ALEPLSGRMFWTELGI----KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADP--------------K 136 (713)
Q Consensus 78 avD~~~~~ly~td~~~----~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~--------------~ 136 (713)
++ .++.||+..-.. ...|++.+++...=+.+. .+..| ..+++ .+++||+.-. .
T Consensus 203 ~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~ 276 (318)
T 2woz_A 203 AI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT--EFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTE 276 (318)
T ss_dssp EE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC--CCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCB
T ss_pred EE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECC--CCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccce
Confidence 44 367898874211 125777877654433332 22222 12333 3578888732 1
Q ss_pred CCcEEEEeCCCCceeEEEecCCCCccceeeeeeCCeEEEE
Q psy6570 137 ARTIESINLNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFS 176 (713)
Q Consensus 137 ~~~I~~~~~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~t 176 (713)
...|+++++....-+.+.. ......+..+.+++||+.
T Consensus 277 ~~~v~~yd~~~~~W~~~~~---~~r~~~~~~~~~~~iyi~ 313 (318)
T 2woz_A 277 VNDIWKYEDDKKEWAGMLK---EIRYASGASCLATRLNLF 313 (318)
T ss_dssp CCCEEEEETTTTEEEEEES---CCGGGTTCEEEEEEEEGG
T ss_pred eeeEEEEeCCCCEehhhcc---cccccccceeeCCEEEEE
Confidence 3567777776654444421 123344555666677653
No 484
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.86 E-value=90 Score=30.49 Aligned_cols=158 Identities=14% Similarity=0.135 Sum_probs=85.5
Q ss_pred eeEEEccCcccEEecCCCCCc---eEEEeccCCeEEEeecC----CCCCCeEEEEecCCceEEEEEcCCCCCcc---eEE
Q psy6570 9 VTRVKREMNLKTVLSNLHDPR---GVAVDWVGKNLYWTDAG----GRSSNNIMVSTLEGRKKRTLLNTGLNEPY---DIA 78 (713)
Q Consensus 9 I~~~~~~~~~~~~~~~~~~p~---gla~D~~~~~ly~td~~----~~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~ia 78 (713)
+.++++.+..-..+..+..|+ ++++ .+++||+.-.. ......+.++++....=+.+. .+..|+ .++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPIKVYGHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSSCEESCEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCCcccccEEE
Confidence 667777765433334444443 3444 36889986431 112356888888765443332 223332 344
Q ss_pred EcCCCCcEEEEccC-----CCCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcC-----CCCcEEEEeC
Q psy6570 79 LEPLSGRMFWTELG-----IKPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADP-----KARTIESINL 145 (713)
Q Consensus 79 vD~~~~~ly~td~~-----~~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~-----~~~~I~~~~~ 145 (713)
+ .++.||+..-. ....+++.++....=+.+. .+..| .++++- +++||+.-. ....|+++++
T Consensus 156 ~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 156 S--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA--PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp E--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEET
T ss_pred E--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC--CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEEC
Confidence 4 47889986421 1136888888754333332 22222 233443 679999842 2346888888
Q ss_pred CCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 146 NGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 146 ~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
+...-+.+..... .....++.+.+++||+.-
T Consensus 230 ~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~G 260 (318)
T 2woz_A 230 KTNKWEVMTEFPQ-ERSSISLVSLAGSLYAIG 260 (318)
T ss_dssp TTCCEEECCCCSS-CCBSCEEEEETTEEEEEC
T ss_pred CCCeEEECCCCCC-cccceEEEEECCEEEEEC
Confidence 7655444432211 122345666788898873
No 485
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=68.53 E-value=1.5e+02 Score=33.07 Aligned_cols=120 Identities=9% Similarity=0.049 Sum_probs=64.6
Q ss_pred EeccCCeEEEe---ecCC----CCCCeEEEEecCCc--------eEEEEE-cCCCCCcceEEEcCCCCcEEEEccC-CCC
Q psy6570 33 VDWVGKNLYWT---DAGG----RSSNNIMVSTLEGR--------KKRTLL-NTGLNEPYDIALEPLSGRMFWTELG-IKP 95 (713)
Q Consensus 33 ~D~~~~~ly~t---d~~~----~~~~~I~~~~~~G~--------~~~~l~-~~~~~~p~~iavD~~~~~ly~td~~-~~~ 95 (713)
++...++||+. ++.. ...++|.+++++.. ..+.++ ...-..+.++++. .+.||++-.. ...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT--KDRVFLATYDNVVA 372 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC--SSCEEEEEEETTEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE--CCEEEEEEEECCEE
Confidence 35567788873 2100 03577999988652 233333 3333445677765 4567766432 234
Q ss_pred eEEEEecCCC--CcEEEEe-CCCCCCeeEEEeCCCCeEEEEc---CCCCcEEEEeCCCCceeEEEe
Q psy6570 96 RISGASIDGK--NKFNLVD-NNIQWPTGITIDYPSQRLYWAD---PKARTIESINLNGKDRFVVYH 155 (713)
Q Consensus 96 ~I~~~~~dG~--~~~~l~~-~~~~~p~glavd~~~~~LY~~d---~~~~~I~~~~~~g~~~~~~~~ 155 (713)
+|++.++++. ..+.++. ........+.+++..+.|+++- .....|+.+++. ...+.+..
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEEC
T ss_pred EEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEec
Confidence 7888877543 2333222 1122334455555666666653 345679999887 44444443
No 486
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=67.08 E-value=2.5 Score=27.30 Aligned_cols=26 Identities=15% Similarity=0.074 Sum_probs=18.0
Q ss_pred cccccccchhHHHHHHHHHHHHHHhh
Q psy6570 677 KKQSYVNSHISSILILILLLITVGGI 702 (713)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (713)
.+....++.+++.++.++++++++.+
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~ 33 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVF 33 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHH
Confidence 34566788888888777777655544
No 487
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=66.16 E-value=1.3e+02 Score=33.52 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=55.1
Q ss_pred CCeEEEEecCCceEEEEEcC-C---CCCcceEEEcCCCC-cEEEEccC----CCCeEEEEecCCCCcEEEEeCCCCCCee
Q psy6570 50 SNNIMVSTLEGRKKRTLLNT-G---LNEPYDIALEPLSG-RMFWTELG----IKPRISGASIDGKNKFNLVDNNIQWPTG 120 (713)
Q Consensus 50 ~~~I~~~~~~G~~~~~l~~~-~---~~~p~~iavD~~~~-~ly~td~~----~~~~I~~~~~dG~~~~~l~~~~~~~p~g 120 (713)
.+.|++.+-.|+.=+.+... . +.....|++||.+. .+|++... ..+.|++..-.|..=+.+ .........
T Consensus 64 ~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~-~~p~~~~~~ 142 (685)
T 3f6k_A 64 QSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQT-DLPFHPLTQ 142 (685)
T ss_dssp EEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEE-ECSSCBSSC
T ss_pred CCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEec-cCCCCCceE
Confidence 34577766556443333211 1 11235799999765 78887531 134677766445444333 323222236
Q ss_pred EEEeCCCC-eEEEEcCCCCcEEEEeCCCCceeEEE
Q psy6570 121 ITIDYPSQ-RLYWADPKARTIESINLNGKDRFVVY 154 (713)
Q Consensus 121 lavd~~~~-~LY~~d~~~~~I~~~~~~g~~~~~~~ 154 (713)
|+++|.+. +||++. ..+.|++..=.|..-+.+.
T Consensus 143 l~~~P~~~~~l~a~~-~~~gly~S~DgG~TW~~i~ 176 (685)
T 3f6k_A 143 MMYSPQNSDYLLALS-TENGLWVSKNFGGKWEEIH 176 (685)
T ss_dssp CEEETTEEEEEEEEB-TTCCEEEESSTTSSEEEEE
T ss_pred EEEecCCCCEEEEEE-CCCCEEEEeCCCCCcEEee
Confidence 99998654 566654 3456776544454444443
No 488
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=65.77 E-value=1.2e+02 Score=32.72 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=86.5
Q ss_pred EecCCCCCceEEEeccCCeEEEeecCCCCCCeEEEEecCC-------c---eEEEEEcC-C-CCCcceEEEcCCCCcEEE
Q psy6570 21 VLSNLHDPRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEG-------R---KKRTLLNT-G-LNEPYDIALEPLSGRMFW 88 (713)
Q Consensus 21 ~~~~~~~p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G-------~---~~~~l~~~-~-~~~p~~iavD~~~~~ly~ 88 (713)
.++.-++|+|+.++|.+..+|++.. ...++.+++.+- + .+.+++.+ . -..|.-.++|+ +|+.|.
T Consensus 318 ~iP~pksPHGv~vsPDGkyi~v~GK---LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYT 393 (638)
T 3sbq_A 318 YVPVPKNPHGCNTSSDGKYFIAAGK---LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYT 393 (638)
T ss_dssp EEEESSSCCCEEECTTSCEEEEECT---TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEE
T ss_pred EEeCCCCCcceeeCCCCCEEEEcCC---CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEe
Confidence 3677899999999999999999887 778888888762 1 11112211 1 25699999997 568998
Q ss_pred EccCCCCeEEEEecC-------CCCcEEEEe-CC-CCCCeeE------EEeCCCCeEEEEcCC------------CCcEE
Q psy6570 89 TELGIKPRISGASID-------GKNKFNLVD-NN-IQWPTGI------TIDYPSQRLYWADPK------------ARTIE 141 (713)
Q Consensus 89 td~~~~~~I~~~~~d-------G~~~~~l~~-~~-~~~p~gl------avd~~~~~LY~~d~~------------~~~I~ 141 (713)
|-.-.. .|.+-+++ |.....++. .. ..+|..+ +.+++.++|.....- ...-+
T Consensus 394 tlfidS-qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~Q 472 (638)
T 3sbq_A 394 TLFIDS-QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQ 472 (638)
T ss_dssp EETTTT-EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEE
T ss_pred eeeecc-eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcce
Confidence 875544 77776554 333333332 11 2344444 346667777665421 12357
Q ss_pred EEeCCCCceeEEEecCCCCccc
Q psy6570 142 SINLNGKDRFVVYHTEDNGYKP 163 (713)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~~~~p 163 (713)
.+++.|...+++..... +..|
T Consensus 473 lidIsGdkM~lv~D~P~-~~EP 493 (638)
T 3sbq_A 473 LIDISGDEMKLVHDGPT-FAEP 493 (638)
T ss_dssp EEECSSSSCEEEEEEEE-SSCC
T ss_pred eEecCCCceEEEecCCC-CCCC
Confidence 78888888777776543 3444
No 489
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.46 E-value=1.5e+02 Score=31.72 Aligned_cols=151 Identities=5% Similarity=-0.176 Sum_probs=76.9
Q ss_pred CceEEEeccCCeEEEeecCCCCCCeEEEEecCCc-eEEEEEcCCCCCcceEEE-cCCCC-cEEEEccCCCCeEEEEecCC
Q psy6570 28 PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGR-KKRTLLNTGLNEPYDIAL-EPLSG-RMFWTELGIKPRISGASIDG 104 (713)
Q Consensus 28 p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~-~~~~l~~~~~~~p~~iav-D~~~~-~ly~td~~~~~~I~~~~~dG 104 (713)
..++++.+. +.| ++-. ..+.|.+.++... .....+........+|++ -+..+ .++.|-.... .|..-++..
T Consensus 269 v~sv~~s~~-~~l-asgs---~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-tvklWD~~~ 342 (524)
T 2j04_B 269 ITTFDFLSP-TTV-VCGF---KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-YFYIFNPKD 342 (524)
T ss_dssp EEEEEESSS-SEE-EEEE---TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-EEEEECGGG
T ss_pred EEEEEecCC-CeE-EEEe---CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-eEEEEECCC
Confidence 345555432 344 4444 5788989888742 222222222345667742 23344 6777665444 677766643
Q ss_pred -CCcEEEEe-CCCCCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCCCc-eeEEEecCCCCccceeeeee-CCeEEEEeCCC
Q psy6570 105 -KNKFNLVD-NNIQWPTGITIDYPSQRLYWADPKARTIESINLNGKD-RFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRT 180 (713)
Q Consensus 105 -~~~~~l~~-~~~~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~ 180 (713)
+...++.. ........|++.|.... +++-...+.|...++.... ...+... .....+|++. .+.++.+-...
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH---~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSR---ETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEEC---SSCEEEEECCSSCCBCEEEETT
T ss_pred CCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccceeeecC---CCceEEEEeCCCCCeEEEEECC
Confidence 22223322 11122467999976554 5554455667777765433 2333322 2233455544 23344555556
Q ss_pred CcEEEEcc
Q psy6570 181 NNILKINK 188 (713)
Q Consensus 181 ~~i~~~~~ 188 (713)
+.|...+.
T Consensus 419 gtv~lwd~ 426 (524)
T 2j04_B 419 GSLIITNA 426 (524)
T ss_dssp TEEECCBS
T ss_pred CEEEEEec
Confidence 66665554
No 490
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=65.15 E-value=3.2 Score=31.82 Aligned_cols=22 Identities=14% Similarity=0.159 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHHHHHhheeeE
Q psy6570 685 HISSILILILLLITVGGIGYYI 706 (713)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~ 706 (713)
.+++.+++.+||++++++++|+
T Consensus 12 ~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 12 VVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 3333444445555555555555
No 491
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=64.32 E-value=1.1e+02 Score=29.63 Aligned_cols=160 Identities=11% Similarity=0.069 Sum_probs=87.5
Q ss_pred CceeEEEccCcccEEecCCCCC---ceEEEeccCCeEEEeecCC--CCCCeEEEEecCCceEEEEEcCCCCCcc---eEE
Q psy6570 7 GNVTRVKREMNLKTVLSNLHDP---RGVAVDWVGKNLYWTDAGG--RSSNNIMVSTLEGRKKRTLLNTGLNEPY---DIA 78 (713)
Q Consensus 7 ~~I~~~~~~~~~~~~~~~~~~p---~gla~D~~~~~ly~td~~~--~~~~~I~~~~~~G~~~~~l~~~~~~~p~---~ia 78 (713)
..+..+++....-..+..+..| .++++ .++.||+.-... .....+.++++....-+.+. .+..|+ +++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA--NMRDRRSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCC--CCCccccceEEE
Confidence 4567777776543333444444 23433 468899864311 12456889998765544433 233332 344
Q ss_pred EcCCCCcEEEEccCC----CCeEEEEecCCCCcEEEEeCCCCCC---eeEEEeCCCCeEEEEcC-------CCCcEEEEe
Q psy6570 79 LEPLSGRMFWTELGI----KPRISGASIDGKNKFNLVDNNIQWP---TGITIDYPSQRLYWADP-------KARTIESIN 144 (713)
Q Consensus 79 vD~~~~~ly~td~~~----~~~I~~~~~dG~~~~~l~~~~~~~p---~glavd~~~~~LY~~d~-------~~~~I~~~~ 144 (713)
+ .++.||+..-.. ...+++.++....-+.+. .+..| ..+++. +++||+.-. ....+++++
T Consensus 106 ~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 106 V--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA--PMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp E--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEE
T ss_pred E--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC--CCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEe
Confidence 4 367898864211 125777877654333332 22222 233333 689999742 145699999
Q ss_pred CCCCceeEEEecCCCCccceeeeeeCCeEEEEe
Q psy6570 145 LNGKDRFVVYHTEDNGYKPYKLEVFEDNLYFST 177 (713)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~p~~i~~~~~~ly~td 177 (713)
+....-+.+..... .....++.+.+++||+.-
T Consensus 180 ~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~G 211 (302)
T 2xn4_A 180 ATTNEWTYIAEMST-RRSGAGVGVLNNLLYAVG 211 (302)
T ss_dssp TTTTEEEEECCCSS-CCBSCEEEEETTEEEEEC
T ss_pred CCCCcEEECCCCcc-ccccccEEEECCEEEEEC
Confidence 87765555533221 223345666788899874
No 492
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=64.16 E-value=3.7 Score=36.33 Aligned_cols=29 Identities=38% Similarity=0.683 Sum_probs=21.8
Q ss_pred CCCCCC---CCCCCCcEEeecCCCceeeCCCCCc
Q psy6570 552 ANKCTP---NYCSNNGTCVLIEGKPSCKCLPPYS 582 (713)
Q Consensus 552 ~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~ 582 (713)
.++|.. ..|. ..|.+..|+|+|.|++||.
T Consensus 117 ~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 117 INECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred CcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 345653 2464 4799999999999999998
No 493
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=63.65 E-value=2.3 Score=46.17 Aligned_cols=66 Identities=24% Similarity=0.653 Sum_probs=32.8
Q ss_pred CCCCceeeCCCCCCCCCceeeCCCCcccCCCCccCCCCCCCCCCEEEcCCCeeeCCCCCccCCCC--cCCCCCCCCCcEe
Q psy6570 352 CLNQGMCYPDLTHPEPTYKCHCAPSYTGARCESRICENKCHNGGTCIATTQTCVCPPGFTGDTCQ--QCLNLKCQNGGVC 429 (713)
Q Consensus 352 C~~~~~C~~~~~~~~~~~~C~C~~G~~g~~C~~~~C~~~C~~~~~C~~~~~~C~C~~g~~g~~C~--~C~~~~C~~~~~C 429 (713)
|...|..... ..+|.|.+||... +..|.. |++||...... .|. +|..+..
T Consensus 252 C~~dG~w~~p------~G~C~C~~G~e~~-------------~~~C~a------C~~g~~k~~~~~~~C~--~CP~~S~- 303 (536)
T 3fl7_A 252 CAVDGEWLVP------IGQCLCQAGYEKV-------------EDACQA------CSPGFFKFEASESPCL--ECPEHTL- 303 (536)
T ss_dssp ECTTSCBCCC------BCCCEECTTEEEE-------------TTEEEE------CCTTEECCSCCSSCCE--ECCSSEE-
T ss_pred EcCCCCEecc------cCcEeccCccccC-------------Cceeee------cCCCCCcccCCCCccc--cCCCCCC-
Confidence 5555555433 3368888887632 234543 77776543221 121 1222222
Q ss_pred ccCCCCccccCCCCCc
Q psy6570 430 VNKTTGLECDCPKFYY 445 (713)
Q Consensus 430 ~~~~~~~~C~C~~G~~ 445 (713)
....|++.|.|..||.
T Consensus 304 s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 304 PSPEGATSCECEEGFF 319 (536)
T ss_dssp CCCTTCSSCEECTTCB
T ss_pred CCCCCccEEEEecccc
Confidence 2234556677776665
No 494
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=60.29 E-value=2.2 Score=28.37 Aligned_cols=29 Identities=24% Similarity=0.246 Sum_probs=11.9
Q ss_pred ccchhHHHHHHHHHHHHHHhheeeEEEEec
Q psy6570 682 VNSHISSILILILLLITVGGIGYYIFRIKM 711 (713)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (713)
.++.+.+ +++++++.+++++++.|+|+++
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCSCC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhhhc
Confidence 4555556 3333333333333334444443
No 495
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=57.55 E-value=2.1e+02 Score=30.96 Aligned_cols=15 Identities=7% Similarity=0.131 Sum_probs=13.0
Q ss_pred eEEEeCCCCeEEEEc
Q psy6570 120 GITIDYPSQRLYWAD 134 (713)
Q Consensus 120 glavd~~~~~LY~~d 134 (713)
.+++|+..++||+..
T Consensus 250 ~~a~d~~~g~vyv~~ 264 (582)
T 1flg_A 250 SASFDAETNTIIVGA 264 (582)
T ss_dssp CCEEETTTTEEEEEE
T ss_pred CceEcCCCCEEEEeC
Confidence 579999999999876
No 496
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=55.83 E-value=5.9 Score=42.98 Aligned_cols=39 Identities=21% Similarity=0.536 Sum_probs=18.5
Q ss_pred CCCCcccCCCCccCCCCCCCCCCEEE-cCCCeeeCCCCCcc
Q psy6570 373 CAPSYTGARCESRICENKCHNGGTCI-ATTQTCVCPPGFTG 412 (713)
Q Consensus 373 C~~G~~g~~C~~~~C~~~C~~~~~C~-~~~~~C~C~~g~~g 412 (713)
|++||.........|. +|..+..=. .+++.|.|..||..
T Consensus 281 C~~g~~k~~~~~~~C~-~CP~~S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 281 CSPGFFKFEASESPCL-ECPEHTLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp CCTTEECCSCCSSCCE-ECCSSEECCCTTCSSCEECTTCBC
T ss_pred cCCCCCcccCCCCccc-cCCCCCCCCCCCccEEEEeccccc
Confidence 6666665443333332 243332211 15566777777653
No 497
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=53.74 E-value=2.6 Score=42.87 Aligned_cols=29 Identities=31% Similarity=0.896 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCeEecCCCCcceeecCCCcccCC--C
Q psy6570 593 PSCHNYCDNAGLCSYSKQGKPVCTCVNGWSGIT--C 626 (713)
Q Consensus 593 ~~C~~~C~~~g~C~~~~~g~~~C~C~~G~~G~~--C 626 (713)
..|++.|+++|.|.... |.|.+||.|.. |
T Consensus 192 ~~Cp~~CsGhG~C~~g~-----C~Cd~G~~g~d~~C 222 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISGV-----CFCDLGYTAAQGTC 222 (387)
T ss_dssp SCCGGGGGGSEEEETTE-----EEECTTEEEETTEE
T ss_pred ccCccccCCCceecCCe-----EEecCCcccCCCcc
No 498
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.29 E-value=2.5e+02 Score=30.40 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=50.9
Q ss_pred CCCeeEEEeCCCCeEEEEcCCCCcEEEEeCCC----------CceeEEEecCCCCccceeeeee-CCeEEEEeCCCCcEE
Q psy6570 116 QWPTGITIDYPSQRLYWADPKARTIESINLNG----------KDRFVVYHTEDNGYKPYKLEVF-EDNLYFSTYRTNNIL 184 (713)
Q Consensus 116 ~~p~glavd~~~~~LY~~d~~~~~I~~~~~~g----------~~~~~~~~~~~~~~~p~~i~~~-~~~ly~td~~~~~i~ 184 (713)
+.|.|+-++|+++++|++.....++.+++++. ..+..+.........|+=.+++ .++.|.+-.-...|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 57999999999999999999999999988652 1122222222224467666776 457888876667777
Q ss_pred EEcc
Q psy6570 185 KINK 188 (713)
Q Consensus 185 ~~~~ 188 (713)
+.+.
T Consensus 403 kWni 406 (638)
T 3sbq_A 403 KWNM 406 (638)
T ss_dssp EEEH
T ss_pred EEec
Confidence 6654
No 499
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=53.07 E-value=2.3e+02 Score=31.10 Aligned_cols=183 Identities=7% Similarity=-0.053 Sum_probs=0.0
Q ss_pred ceeEEEccCcccEEecCCCCCc---eEEEecc-CCeEEEeec---CCCCCCeEEEEecCCceEEEEEc---CCCCCcceE
Q psy6570 8 NVTRVKREMNLKTVLSNLHDPR---GVAVDWV-GKNLYWTDA---GGRSSNNIMVSTLEGRKKRTLLN---TGLNEPYDI 77 (713)
Q Consensus 8 ~I~~~~~~~~~~~~~~~~~~p~---gla~D~~-~~~ly~td~---~~~~~~~I~~~~~~G~~~~~l~~---~~~~~p~~i 77 (713)
.+.++++.+..-..+..+..|+ ++++ . +++||+.-. +......+.++++....-+.+-. ..+..+...
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~--~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSAT--MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ 343 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEE--CTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT
T ss_pred ceEEecCcCCceeECCCCCccccccceEE--ecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc
Q ss_pred EEcCCCCcEEEEccCC--------CCeEEEEecCCCCcEEEEeCCCC---------CCeeEEEeCCCCeEEEEcCCCC--
Q psy6570 78 ALEPLSGRMFWTELGI--------KPRISGASIDGKNKFNLVDNNIQ---------WPTGITIDYPSQRLYWADPKAR-- 138 (713)
Q Consensus 78 avD~~~~~ly~td~~~--------~~~I~~~~~dG~~~~~l~~~~~~---------~p~glavd~~~~~LY~~d~~~~-- 138 (713)
++-..+++||+..... ...|++.+.....-......... .-..+.++..+++||+.-....
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Q ss_pred ---------cEEEEeCCCCceeEEE--ecCCCCccceeeeeeCCeEEEEeCCC-----------CcEEEEcccCCC
Q psy6570 139 ---------TIESINLNGKDRFVVY--HTEDNGYKPYKLEVFEDNLYFSTYRT-----------NNILKINKFGNS 192 (713)
Q Consensus 139 ---------~I~~~~~~g~~~~~~~--~~~~~~~~p~~i~~~~~~ly~td~~~-----------~~i~~~~~~~~~ 192 (713)
.|+.++.....-..+. ...........+.+.+++||+.-... ..+..++.....
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
No 500
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=52.20 E-value=1.8e+02 Score=32.91 Aligned_cols=174 Identities=14% Similarity=0.026 Sum_probs=0.0
Q ss_pred cCCceeEEEccCcccEEecCCCC-CceEEEeccCCeEEEeecCCCCCCeEEEEecCCceEEEEEcCCC---CCcceEEEc
Q psy6570 5 SSGNVTRVKREMNLKTVLSNLHD-PRGVAVDWVGKNLYWTDAGGRSSNNIMVSTLEGRKKRTLLNTGL---NEPYDIALE 80 (713)
Q Consensus 5 ~~~~I~~~~~~~~~~~~~~~~~~-p~gla~D~~~~~ly~td~~~~~~~~I~~~~~~G~~~~~l~~~~~---~~p~~iavD 80 (713)
..+.|++-.-.|..-..+..+.. -..|++|+.+..++++-. .+.|++..-.|+.=+.+...-- ..+.-|+++
T Consensus 566 ~~~~v~~S~D~G~tW~~~~~l~~~~~~i~~d~~~~~~~y~g~----~g~v~~S~DgG~tW~~~~~~lp~~~~~~~~i~~~ 641 (763)
T 3a0f_A 566 DGKGPYTSSDYGKTWTAPSGLSKQTTGIAADRVQANTFYVYV----EGDFFVSTDGGKSYTKKGNGLPCCWTYTGTPVTS 641 (763)
T ss_dssp CSSCCEEESSTTSCCBCCBSCCCCCSCEEECSSSTTCEEEEE----TTEEEEESSTTSBCEEECBTSCCSSCCCEEEEEC
T ss_pred CCCceEEeCCCCCCCeecCCCCCCcceEEEeccCCCEEEEEc----CCCEEEEeCCCcCccccccCCCcccCccccEEEC
Q ss_pred C-CCCcEEEEccCCCCeEEEEecCCCCcEEEEeCCCCC-----CeeEEEeCCCCeEEEEcC-----CCCcEEEEeCCCCc
Q psy6570 81 P-LSGRMFWTELGIKPRISGASIDGKNKFNLVDNNIQW-----PTGITIDYPSQRLYWADP-----KARTIESINLNGKD 149 (713)
Q Consensus 81 ~-~~~~ly~td~~~~~~I~~~~~dG~~~~~l~~~~~~~-----p~glavd~~~~~LY~~d~-----~~~~I~~~~~~g~~ 149 (713)
+ ..+.||++-.+.. |++..-.|+.-+.+....-.. -.++++........|+-. ....|++..=.|..
T Consensus 642 ~~~~~~l~~~~~~~~--l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~~gl~~S~D~G~t 719 (763)
T 3a0f_A 642 NLRAGELWVSVKGVG--IYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIPSASQPEGLYMSTDNGGL 719 (763)
T ss_dssp SSSTTCEEEEETTTE--EEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEECSTTSCSEEEEESSTTSC
T ss_pred CCCCCcEEEEcCCCe--EEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCceEEEEEEcccCCCcEEEEeCCCCCC
Q ss_pred eeEEEecCCCCccceeeeee---CCeEEEEeCCCCcEE
Q psy6570 150 RFVVYHTEDNGYKPYKLEVF---EDNLYFSTYRTNNIL 184 (713)
Q Consensus 150 ~~~~~~~~~~~~~p~~i~~~---~~~ly~td~~~~~i~ 184 (713)
-+.+......+..+..|+++ .++||++..+.+.++
T Consensus 720 W~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T~GrGi~~ 757 (763)
T 3a0f_A 720 WTRLNDDAHNYGGATVISGDPRIYGRVYIGMNGRGIIC 757 (763)
T ss_dssp CEECSCTTCCTBCEEEEEECTTSTTEEEEEEBSSCEEE
T ss_pred cEeccCccccCCCcceEEeCCCCCCEEEEeCCCCeEEE
Done!