Query psy6572
Match_columns 1416
No_of_seqs 734 out of 4278
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 21:36:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m0c_C LDL receptor, low-densi 100.0 4E-119 1E-123 1164.5 46.6 661 67-847 23-712 (791)
2 1n7d_A LDL receptor, low-densi 100.0 1E-114 3E-119 1119.3 48.7 660 67-846 5-693 (699)
3 3m0c_C LDL receptor, low-densi 100.0 1.7E-89 5.9E-94 887.5 36.9 600 27-756 20-655 (791)
4 1n7d_A LDL receptor, low-densi 100.0 8.8E-86 3E-90 849.8 44.7 599 28-756 3-637 (699)
5 3p5b_L Low density lipoprotein 100.0 2.7E-65 9.1E-70 618.6 43.8 380 453-845 1-398 (400)
6 3v65_B Low-density lipoprotein 100.0 4.4E-65 1.5E-69 614.1 40.5 378 451-844 2-385 (386)
7 3v64_C Agrin; beta propeller, 100.0 3.7E-59 1.3E-63 554.9 39.7 337 496-845 1-343 (349)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 4.6E-56 1.6E-60 565.2 36.5 338 495-844 264-619 (628)
9 3s94_A LRP-6, low-density lipo 100.0 6.3E-55 2.2E-59 554.3 38.1 336 495-845 271-618 (619)
10 3sov_A LRP-6, low-density lipo 100.0 7.6E-51 2.6E-55 476.9 37.5 298 538-845 3-309 (318)
11 1ijq_A LDL receptor, low-densi 100.0 2.4E-48 8.1E-53 455.7 38.5 299 539-845 1-316 (316)
12 4a0p_A LRP6, LRP-6, low-densit 100.0 7E-48 2.4E-52 490.1 37.7 297 537-846 4-307 (628)
13 3s94_A LRP-6, low-density lipo 100.0 4.5E-48 1.5E-52 491.4 32.1 298 538-845 8-314 (619)
14 3v64_C Agrin; beta propeller, 100.0 3.7E-33 1.3E-37 331.3 30.2 283 452-755 1-297 (349)
15 3v65_B Low-density lipoprotein 100.0 1.7E-32 5.9E-37 330.0 30.5 290 446-755 37-340 (386)
16 3p5b_L Low density lipoprotein 100.0 9.3E-32 3.2E-36 325.1 35.6 290 447-756 34-343 (400)
17 1npe_A Nidogen, entactin; glyc 100.0 9.9E-29 3.4E-33 280.9 32.7 249 540-797 2-261 (267)
18 3sov_A LRP-6, low-density lipo 99.9 2.5E-25 8.5E-30 260.5 27.4 206 539-756 46-261 (318)
19 1ijq_A LDL receptor, low-densi 99.9 6.6E-24 2.2E-28 248.3 28.2 208 537-756 39-261 (316)
20 3s25_A Hypothetical 7-bladed b 99.9 2.2E-22 7.4E-27 233.4 24.9 211 546-782 86-300 (302)
21 1npe_A Nidogen, entactin; glyc 99.9 8.7E-21 3E-25 215.3 25.6 204 579-795 2-217 (267)
22 2fyj_A Low-density lipoprotein 99.8 7.8E-20 2.7E-24 168.6 9.0 79 1009-1090 2-81 (82)
23 2fyj_A Low-density lipoprotein 99.8 9.4E-20 3.2E-24 168.1 8.0 76 28-103 2-81 (82)
24 2fcw_B LDL receptor, low-densi 99.8 1E-19 3.5E-24 166.6 3.9 73 30-102 2-78 (80)
25 2fcw_B LDL receptor, low-densi 99.8 8.5E-20 2.9E-24 167.1 3.0 74 159-241 2-75 (80)
26 3tc9_A Hypothetical hydrolase; 99.8 1E-16 3.5E-21 195.3 30.1 232 539-771 149-427 (430)
27 4hw6_A Hypothetical protein, I 99.8 1.2E-16 4E-21 194.8 28.8 230 539-772 152-431 (433)
28 3tc9_A Hypothetical hydrolase; 99.7 6E-17 2.1E-21 197.4 23.2 205 565-776 135-372 (430)
29 4hw6_A Hypothetical protein, I 99.7 2.5E-16 8.6E-21 191.9 23.9 205 565-776 137-375 (433)
30 3hrp_A Uncharacterized protein 99.7 3.9E-15 1.3E-19 180.2 29.6 226 539-771 141-407 (409)
31 3s25_A Hypothetical 7-bladed b 99.7 1E-15 3.4E-20 177.5 20.5 179 539-735 115-301 (302)
32 3kya_A Putative phosphatase; s 99.7 1.1E-14 3.7E-19 178.0 30.2 231 540-772 152-473 (496)
33 3hrp_A Uncharacterized protein 99.7 9E-15 3.1E-19 177.0 27.9 206 565-777 129-357 (409)
34 3kya_A Putative phosphatase; s 99.6 1.7E-14 6E-19 176.1 24.1 212 564-782 136-416 (496)
35 3fvz_A Peptidyl-glycine alpha- 99.6 3.4E-14 1.2E-18 166.2 25.7 224 565-795 22-300 (329)
36 1rwi_B Serine/threonine-protei 99.6 3.4E-14 1.2E-18 159.7 22.0 219 541-773 36-263 (270)
37 1rwi_B Serine/threonine-protei 99.6 4.7E-14 1.6E-18 158.6 22.1 213 568-795 25-242 (270)
38 3fvz_A Peptidyl-glycine alpha- 99.6 9.2E-14 3.2E-18 162.6 22.7 216 549-772 70-320 (329)
39 2qc5_A Streptogramin B lactona 99.6 1.1E-12 3.6E-17 149.2 29.0 241 540-794 31-279 (300)
40 2gtl_O Extracellular hemoglobi 99.5 2.2E-16 7.5E-21 168.9 -5.6 131 49-215 36-184 (215)
41 1q7f_A NHL, brain tumor CG1071 99.5 1.3E-12 4.3E-17 148.7 24.7 218 565-794 28-258 (286)
42 2z2n_A Virginiamycin B lyase; 99.5 6.2E-12 2.1E-16 142.7 28.8 241 540-794 26-274 (299)
43 2fp8_A Strictosidine synthase; 99.5 1.9E-12 6.6E-17 150.7 24.8 195 567-772 80-311 (322)
44 2qc5_A Streptogramin B lactona 99.5 3.6E-12 1.2E-16 144.7 25.5 217 565-795 18-238 (300)
45 3g4e_A Regucalcin; six bladed 99.5 4E-12 1.4E-16 146.4 25.5 220 563-795 9-249 (297)
46 2fp8_A Strictosidine synthase; 99.5 1.8E-12 6.3E-17 150.9 22.6 203 565-781 17-275 (322)
47 1q7f_A NHL, brain tumor CG1071 99.5 7.4E-12 2.5E-16 142.3 27.0 219 541-770 42-276 (286)
48 2gtl_O Extracellular hemoglobi 99.5 8.8E-16 3E-20 164.3 -6.5 128 136-301 40-184 (215)
49 2z2n_A Virginiamycin B lyase; 99.4 2.9E-11 9.8E-16 137.2 26.0 217 565-795 13-233 (299)
50 3e5z_A Putative gluconolactona 99.4 1.5E-11 5.2E-16 140.7 22.9 205 560-781 21-252 (296)
51 2p4o_A Hypothetical protein; p 99.4 3E-11 1E-15 139.8 25.0 212 540-764 43-279 (306)
52 3dr2_A Exported gluconolactona 99.4 3.7E-11 1.3E-15 138.7 24.9 206 560-780 38-272 (305)
53 2p4o_A Hypothetical protein; p 99.4 2.3E-11 7.9E-16 140.8 23.0 212 567-795 32-263 (306)
54 2ism_A Putative oxidoreductase 99.4 1.9E-11 6.4E-16 144.9 22.1 227 560-794 24-322 (352)
55 3dsm_A Uncharacterized protein 99.3 1.3E-10 4.3E-15 136.0 26.6 238 540-797 54-322 (328)
56 2xrc_A Human complement factor 99.3 1.1E-12 3.7E-17 164.6 5.5 103 1015-1129 174-276 (565)
57 3a9g_A Putative uncharacterize 99.3 1.9E-10 6.7E-15 136.2 24.2 228 560-794 22-319 (354)
58 2w2n_E LDL receptor, low-densi 99.3 9.7E-13 3.3E-17 128.1 3.4 84 446-533 23-107 (107)
59 3vgz_A Uncharacterized protein 99.3 1.7E-09 5.8E-14 125.6 31.6 242 539-794 52-321 (353)
60 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.6E-10 1.6E-14 128.6 24.2 223 560-794 11-275 (314)
61 2xrc_A Human complement factor 99.2 3.5E-12 1.2E-16 160.1 6.6 104 975-1091 173-277 (565)
62 1lmj_A Fibrillin 1; EGF, calci 99.2 6E-12 2E-16 117.7 5.8 81 451-533 2-86 (86)
63 3dr2_A Exported gluconolactona 99.2 1.1E-09 3.6E-14 126.5 25.5 212 540-771 57-303 (305)
64 2kny_A LRP-1, linker, APO-E; l 99.2 2.5E-12 8.5E-17 117.4 2.4 71 244-314 4-76 (80)
65 2qe8_A Uncharacterized protein 99.2 3.6E-10 1.2E-14 133.0 21.4 195 565-768 65-315 (343)
66 2qe8_A Uncharacterized protein 99.2 6.5E-10 2.2E-14 130.7 23.1 219 567-795 17-299 (343)
67 3g4e_A Regucalcin; six bladed 99.2 8.1E-10 2.8E-14 127.0 23.1 209 539-764 24-263 (297)
68 3a9g_A Putative uncharacterize 99.2 1.1E-09 3.6E-14 129.9 24.4 213 541-763 41-331 (354)
69 3e5z_A Putative gluconolactona 99.2 3.9E-09 1.3E-13 120.6 27.8 213 541-775 41-287 (296)
70 2ism_A Putative oxidoreductase 99.2 7.6E-10 2.6E-14 131.0 22.2 212 542-764 44-335 (352)
71 1z6c_A Vitamin K-dependent pro 99.2 7.9E-12 2.7E-16 117.1 3.1 82 451-535 2-86 (87)
72 2g8s_A Glucose/sorbosone dehyd 99.2 4.3E-10 1.5E-14 133.2 18.9 211 560-775 11-309 (353)
73 3vgz_A Uncharacterized protein 99.1 1.5E-08 5.2E-13 117.5 29.8 213 567-782 41-270 (353)
74 2dg1_A DRP35, lactonase; beta 99.1 5.1E-09 1.7E-13 121.4 25.7 208 563-781 41-269 (333)
75 3das_A Putative oxidoreductase 99.1 3.8E-09 1.3E-13 124.0 24.4 229 560-795 25-316 (347)
76 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 6E-09 2E-13 119.3 25.4 211 547-772 45-297 (314)
77 3dsm_A Uncharacterized protein 99.1 2.2E-09 7.4E-14 125.5 21.8 196 541-752 96-319 (328)
78 3qqz_A Putative uncharacterize 99.1 1.3E-08 4.3E-13 114.5 26.0 203 567-773 27-252 (255)
79 2ghs_A AGR_C_1268P; regucalcin 99.1 1.2E-08 4.2E-13 119.0 26.7 202 566-781 48-266 (326)
80 2kny_A LRP-1, linker, APO-E; l 99.0 4.1E-11 1.4E-15 109.3 2.4 64 25-88 3-75 (80)
81 3hfq_A Uncharacterized protein 99.0 5.2E-08 1.8E-12 113.5 29.5 230 542-779 53-324 (347)
82 3u4y_A Uncharacterized protein 99.0 6.2E-08 2.1E-12 111.7 29.5 227 539-777 9-255 (331)
83 1ri6_A Putative isomerase YBHE 99.0 1.2E-07 4E-12 109.2 30.4 255 538-800 48-336 (343)
84 2g8s_A Glucose/sorbosone dehyd 99.0 6.5E-09 2.2E-13 123.1 19.2 223 542-771 32-351 (353)
85 1emn_A Fibrillin; extracellula 99.0 2.5E-10 8.7E-15 105.6 4.9 75 451-532 4-81 (82)
86 3das_A Putative oxidoreductase 99.0 7.5E-08 2.5E-12 113.0 26.1 212 541-764 44-328 (347)
87 3u4y_A Uncharacterized protein 99.0 2.1E-07 7.2E-12 107.2 29.8 254 539-798 51-325 (331)
88 2dg1_A DRP35, lactonase; beta 98.9 8.4E-08 2.9E-12 111.1 25.7 217 541-763 57-300 (333)
89 1d2l_A Lipoprotein receptor re 98.9 6E-10 2E-14 89.9 5.0 41 28-69 3-43 (45)
90 1ri6_A Putative isomerase YBHE 98.9 6.1E-07 2.1E-11 103.2 32.3 231 540-773 5-261 (343)
91 3hfq_A Uncharacterized protein 98.9 1.7E-07 5.9E-12 109.1 26.4 207 563-772 36-269 (347)
92 2iwa_A Glutamine cyclotransfer 98.9 2.1E-07 7.2E-12 105.1 25.6 195 568-772 22-235 (266)
93 3scy_A Hypothetical bacterial 98.9 4.7E-07 1.6E-11 106.1 29.7 202 565-776 98-341 (361)
94 1d2l_A Lipoprotein receptor re 98.9 7.9E-10 2.7E-14 89.2 3.9 39 203-244 4-42 (45)
95 1cru_A Protein (soluble quinop 98.9 6.9E-08 2.4E-12 118.0 23.1 154 560-718 20-249 (454)
96 1ajj_A LR5, low-density lipopr 98.9 8.3E-10 2.8E-14 85.5 3.6 35 1055-1089 2-36 (37)
97 2ghs_A AGR_C_1268P; regucalcin 98.9 2E-07 7E-12 108.6 25.6 208 539-764 60-293 (326)
98 1l0q_A Surface layer protein; 98.9 7.1E-07 2.4E-11 105.4 30.6 229 541-781 3-240 (391)
99 2jm4_A Relaxin receptor 1; LDL 98.9 1.3E-09 4.4E-14 87.4 4.3 38 28-65 4-42 (43)
100 3a7q_B Low-density lipoprotein 98.9 1.1E-09 3.6E-14 88.3 3.8 38 28-65 5-42 (44)
101 2knx_A Prolow-density lipoprot 98.9 1E-09 3.5E-14 90.7 3.7 43 28-70 4-47 (50)
102 1ajj_A LR5, low-density lipopr 98.8 7.4E-10 2.5E-14 85.8 2.1 37 159-200 1-37 (37)
103 1l0q_A Surface layer protein; 98.8 8.8E-07 3E-11 104.6 29.9 239 532-782 36-283 (391)
104 3qqz_A Putative uncharacterize 98.8 3.4E-07 1.2E-11 102.8 24.3 174 547-726 48-252 (255)
105 2m0p_A Low-density lipoprotein 98.8 7E-10 2.4E-14 91.7 1.6 38 28-65 4-41 (52)
106 2jm4_A Relaxin receptor 1; LDL 98.8 1.7E-09 5.7E-14 86.7 3.4 39 157-200 4-43 (43)
107 1cr8_A Protein (LOW density li 98.8 2.7E-09 9.2E-14 85.0 4.5 39 247-288 2-40 (42)
108 1cr8_A Protein (LOW density li 98.8 2.5E-09 8.6E-14 85.2 4.2 36 30-65 3-39 (42)
109 2knx_A Prolow-density lipoprot 98.8 2.5E-09 8.7E-14 88.3 4.2 36 247-282 5-40 (50)
110 3scy_A Hypothetical bacterial 98.8 3.1E-06 1E-10 99.1 32.5 202 565-770 48-287 (361)
111 3a7q_B Low-density lipoprotein 98.8 1.4E-09 4.8E-14 87.6 2.4 39 157-200 5-43 (44)
112 2m0p_A Low-density lipoprotein 98.8 7.7E-10 2.6E-14 91.5 0.6 39 157-200 4-42 (52)
113 2bou_A EGF-like module contain 98.8 5.5E-09 1.9E-13 107.2 6.2 86 448-535 39-139 (143)
114 3dpr_E LDL-receptor class A 3; 98.8 3.7E-09 1.2E-13 82.9 3.7 36 1055-1090 1-38 (39)
115 2i1p_A Low-density lipoprotein 98.8 2.5E-09 8.5E-14 87.8 2.5 38 29-66 5-43 (48)
116 1x7a_L Coagulation factor IX, 98.7 7.7E-09 2.6E-13 106.4 6.6 77 451-536 47-128 (146)
117 3dpr_E LDL-receptor class A 3; 98.7 3.8E-09 1.3E-13 82.8 3.3 36 160-200 1-38 (39)
118 3c75_H MADH, methylamine dehyd 98.7 9.4E-07 3.2E-11 106.7 25.8 231 539-781 84-409 (426)
119 1dx5_I Thrombomodulin; serine 98.7 1.6E-09 5.5E-14 107.4 1.2 66 464-532 51-118 (118)
120 1k7b_A Subgroup A ROUS sarcoma 98.7 2.6E-09 8.8E-14 87.4 2.2 37 29-65 5-46 (47)
121 2p9w_A MAL S 1 allergenic prot 98.7 5.3E-07 1.8E-11 104.0 22.0 197 567-769 13-260 (334)
122 1j8e_A Low-density lipoprotein 98.7 2.4E-09 8.3E-14 86.2 1.9 39 203-244 3-41 (44)
123 1k7b_A Subgroup A ROUS sarcoma 98.7 3.1E-09 1.1E-13 86.9 2.3 39 157-200 4-47 (47)
124 1j8e_A Low-density lipoprotein 98.7 2.9E-09 9.9E-14 85.8 2.0 38 28-65 2-39 (44)
125 2w86_A Fibrillin-1, fibrillin1 98.7 7E-09 2.4E-13 106.9 5.0 44 490-533 101-147 (147)
126 3sre_A PON1, serum paraoxonase 98.7 8.4E-07 2.9E-11 104.4 22.2 193 568-773 51-297 (355)
127 2i1p_A Low-density lipoprotein 98.7 5.3E-09 1.8E-13 85.9 2.3 38 1054-1091 6-44 (48)
128 3sre_A PON1, serum paraoxonase 98.7 2.2E-06 7.4E-11 101.0 24.7 161 547-714 82-284 (355)
129 2iwa_A Glutamine cyclotransfer 98.7 9.6E-07 3.3E-11 99.8 20.8 164 610-782 22-189 (266)
130 2mad_H Methylamine dehydrogena 98.6 1.5E-05 5.1E-10 94.9 31.3 215 567-795 125-370 (373)
131 1cru_A Protein (soluble quinop 98.6 4.2E-07 1.4E-11 111.1 17.8 154 603-765 20-249 (454)
132 1jrf_A TVA LDL-A module, subgr 98.6 5.1E-09 1.7E-13 85.7 0.2 37 29-65 3-44 (47)
133 1nir_A Nitrite reductase; hemo 98.6 1.4E-05 4.8E-10 100.0 30.8 225 540-774 149-402 (543)
134 1nfu_B Coagulation factor XA, 98.6 2E-08 6.9E-13 107.7 4.1 77 451-536 41-123 (195)
135 2vh0_B Activated factor XA lig 98.6 2.3E-08 7.8E-13 101.4 4.1 77 451-536 41-123 (134)
136 1aut_L Activated protein C; se 98.6 4.8E-08 1.6E-12 96.2 6.3 66 467-537 27-97 (114)
137 1jrf_A TVA LDL-A module, subgr 98.6 1.1E-08 3.7E-13 83.8 1.4 38 158-200 3-45 (47)
138 2p9w_A MAL S 1 allergenic prot 98.6 1.3E-06 4.4E-11 100.8 18.9 162 608-773 12-214 (334)
139 3mbr_X Glutamine cyclotransfer 98.6 1.6E-05 5.5E-10 88.2 27.0 195 567-771 21-232 (243)
140 1pby_B Quinohemoprotein amine 98.6 1.7E-05 5.9E-10 90.6 28.5 217 547-781 10-317 (337)
141 3sjl_D Methylamine dehydrogena 98.6 1.4E-05 4.9E-10 94.9 28.3 248 534-795 84-382 (386)
142 2c4f_L Coagulation factor VII 98.6 7.1E-08 2.4E-12 98.8 7.0 78 451-537 46-132 (142)
143 1jof_A Carboxy-CIS,CIS-muconat 98.5 1.1E-05 3.6E-10 95.2 25.5 226 539-771 51-338 (365)
144 1dx5_I Thrombomodulin; serine 98.5 8.5E-08 2.9E-12 95.0 4.7 78 451-536 3-81 (118)
145 3nol_A Glutamine cyclotransfer 98.5 2.3E-05 7.7E-10 87.8 24.7 191 569-771 45-253 (262)
146 2gtl_N Extracellular hemoglobi 98.5 6.8E-08 2.3E-12 102.4 4.0 59 1169-1227 51-114 (220)
147 1mda_H Methylamine dehydrogena 98.5 1.7E-05 5.8E-10 94.1 25.0 236 540-795 32-365 (368)
148 2oiz_A Aromatic amine dehydrog 98.4 3.3E-05 1.1E-09 91.3 27.4 243 538-795 60-356 (361)
149 1z1y_A Ookinete surface protei 98.4 1.6E-07 5.5E-12 100.7 6.5 80 449-533 88-178 (186)
150 2wph_E Coagulation factor IXA 98.4 9.9E-08 3.4E-12 82.0 3.8 53 455-513 2-55 (59)
151 3nol_A Glutamine cyclotransfer 98.4 1.1E-05 3.7E-10 90.4 21.2 177 540-725 53-254 (262)
152 2gtl_N Extracellular hemoglobi 98.4 1.1E-07 3.6E-12 100.9 4.6 58 203-263 51-112 (220)
153 3q6k_A 43.2 kDa salivary prote 98.4 1.9E-05 6.5E-10 93.3 24.2 194 565-765 85-345 (381)
154 3bws_A Protein LP49; two-domai 98.4 5.3E-05 1.8E-09 90.5 28.7 231 539-781 133-397 (433)
155 2gtl_M Hemoglobin linker chain 98.4 1.1E-07 3.7E-12 102.0 4.4 68 246-325 51-119 (217)
156 1uzk_A Fibrillin-1; glycoprote 98.4 4.8E-08 1.6E-12 102.4 1.3 60 473-533 98-162 (162)
157 3nok_A Glutaminyl cyclase; bet 98.4 3.9E-05 1.3E-09 85.9 24.4 188 569-771 57-263 (268)
158 3mbr_X Glutamine cyclotransfer 98.4 2.9E-05 1E-09 86.1 22.9 178 540-726 31-234 (243)
159 2jkh_L Factor X light chain; p 98.4 1.5E-07 5.3E-12 79.8 3.5 45 453-500 2-46 (55)
160 3bws_A Protein LP49; two-domai 98.4 3.6E-05 1.2E-09 91.9 25.8 218 541-770 182-428 (433)
161 1kli_L Factor VIIA; extrinsic 98.4 1.7E-07 5.9E-12 83.1 3.7 47 451-500 4-51 (69)
162 1nir_A Nitrite reductase; hemo 98.4 0.00012 4.3E-09 91.4 31.0 253 539-794 237-534 (543)
163 2wg3_C Hedgehog-interacting pr 98.4 1.5E-05 5.1E-10 97.4 21.8 202 560-772 7-310 (463)
164 1jof_A Carboxy-CIS,CIS-muconat 98.3 4.3E-05 1.5E-09 90.0 24.8 164 565-730 143-344 (365)
165 1jmx_B Amine dehydrogenase; ox 98.3 8.3E-05 2.9E-09 85.5 26.8 215 547-781 20-332 (349)
166 1qks_A Cytochrome CD1 nitrite 98.3 0.00014 4.9E-09 91.1 29.7 226 540-774 167-421 (567)
167 2gtl_M Hemoglobin linker chain 98.2 2.7E-07 9.1E-12 99.0 2.5 65 157-240 51-119 (217)
168 2mad_H Methylamine dehydrogena 98.2 0.00026 8.9E-09 84.1 28.4 238 549-795 48-326 (373)
169 1kli_L Factor VIIA; extrinsic 98.2 6.9E-07 2.3E-11 79.2 4.4 44 494-537 3-49 (69)
170 3h5c_B Vitamin K-dependent pro 98.2 7.9E-07 2.7E-11 103.5 6.0 69 464-537 13-87 (317)
171 2wg3_C Hedgehog-interacting pr 98.2 3.5E-05 1.2E-09 94.1 20.8 201 567-770 69-369 (463)
172 1pby_B Quinohemoprotein amine 98.2 7.3E-05 2.5E-09 85.4 22.3 146 610-764 35-195 (337)
173 1kig_L Factor XA; glycoprotein 98.2 6.3E-07 2.2E-11 74.6 3.0 40 457-499 3-42 (51)
174 3c75_H MADH, methylamine dehyd 98.2 2.5E-05 8.7E-10 94.2 18.2 107 576-684 82-209 (426)
175 3ojy_A Complement component C8 98.2 1.5E-06 5.3E-11 107.6 7.7 108 57-178 12-121 (554)
176 2hqs_A Protein TOLB; TOLB, PAL 98.2 0.00016 5.5E-09 87.0 25.2 221 548-779 159-391 (415)
177 1yo8_A Thrombospondin-2; EGF, 98.2 2.9E-06 1E-10 105.8 10.0 83 448-534 39-146 (634)
178 2bz6_L Blood coagulation facto 98.2 8.8E-07 3E-11 74.4 3.5 43 455-500 2-45 (53)
179 2vj3_A Neurogenic locus notch 98.1 3.7E-06 1.3E-10 85.1 8.4 70 451-533 44-118 (135)
180 3nok_A Glutaminyl cyclase; bet 98.1 5.9E-05 2E-09 84.4 18.4 158 612-782 58-218 (268)
181 2jkh_L Factor X light chain; p 98.1 1.5E-06 5E-11 73.7 4.2 41 497-537 2-44 (55)
182 1qks_A Cytochrome CD1 nitrite 98.1 0.0002 6.9E-09 89.8 25.5 211 573-797 162-398 (567)
183 3no2_A Uncharacterized protein 98.1 0.00057 1.9E-08 77.5 26.5 202 548-763 15-232 (276)
184 3ojy_B Complement component C8 98.1 2.6E-06 8.9E-11 105.5 7.5 99 58-174 15-115 (537)
185 2oiz_A Aromatic amine dehydrog 98.1 0.00037 1.3E-08 82.2 25.2 248 540-795 16-313 (361)
186 1z1y_A Ookinete surface protei 98.1 1E-06 3.4E-11 94.4 2.7 82 448-535 39-137 (186)
187 3sjl_D Methylamine dehydrogena 98.1 0.00025 8.5E-09 84.3 23.3 244 539-795 44-339 (386)
188 2ece_A 462AA long hypothetical 98.0 0.00047 1.6E-08 82.7 25.0 194 565-761 136-399 (462)
189 3ojy_B Complement component C8 98.0 2.7E-06 9.2E-11 105.4 5.7 81 125-222 33-115 (537)
190 1apq_A Complement protease C1R 98.0 3.5E-06 1.2E-10 70.7 4.5 41 494-534 2-52 (53)
191 1uzk_A Fibrillin-1; glycoprote 98.0 2.7E-06 9.2E-11 89.0 4.7 71 451-525 2-85 (162)
192 4d90_A EGF-like repeat and dis 98.0 6.3E-06 2.1E-10 84.2 6.8 72 451-535 51-134 (143)
193 1jmx_B Amine dehydrogenase; ox 98.0 0.00074 2.5E-08 77.5 25.1 150 571-728 4-176 (349)
194 2vj3_A Neurogenic locus notch 98.0 8.2E-06 2.8E-10 82.6 6.9 72 451-533 4-80 (135)
195 1yo8_A Thrombospondin-2; EGF, 98.0 8.6E-06 3E-10 101.6 8.4 68 452-526 3-82 (634)
196 2ojh_A Uncharacterized protein 97.9 0.0012 4.2E-08 73.0 25.0 215 548-776 22-260 (297)
197 3amr_A 3-phytase; beta-propell 97.9 0.00048 1.6E-08 80.1 21.4 174 548-728 50-264 (355)
198 1kig_L Factor XA; glycoprotein 97.9 6E-06 2E-10 68.7 4.0 37 501-537 5-41 (51)
199 1mda_H Methylamine dehydrogena 97.9 0.00032 1.1E-08 83.1 20.4 100 578-679 31-151 (368)
200 2wph_E Coagulation factor IXA 97.9 3.5E-06 1.2E-10 72.4 2.5 38 808-845 2-40 (59)
201 3q6k_A 43.2 kDa salivary prote 97.9 0.00024 8.1E-09 83.9 18.9 163 548-717 136-344 (381)
202 3amr_A 3-phytase; beta-propell 97.9 0.00057 1.9E-08 79.5 21.5 146 622-772 88-261 (355)
203 2ojh_A Uncharacterized protein 97.9 0.00076 2.6E-08 74.7 22.0 201 532-734 46-265 (297)
204 3ojy_A Complement component C8 97.9 6.2E-06 2.1E-10 102.2 5.2 89 125-226 31-121 (554)
205 3no2_A Uncharacterized protein 97.9 0.00077 2.6E-08 76.4 22.1 160 610-782 38-203 (276)
206 1fwx_A Nitrous oxide reductase 97.9 0.00065 2.2E-08 84.2 22.7 254 540-798 102-455 (595)
207 2bz6_L Blood coagulation facto 97.8 1.1E-05 3.9E-10 67.6 3.9 37 501-537 6-43 (53)
208 2hqs_A Protein TOLB; TOLB, PAL 97.8 0.0013 4.4E-08 79.0 22.7 182 549-733 204-393 (415)
209 2ece_A 462AA long hypothetical 97.7 0.001 3.4E-08 79.9 20.6 199 571-775 86-353 (462)
210 3azo_A Aminopeptidase; POP fam 97.7 0.0013 4.3E-08 83.6 23.0 227 542-776 94-371 (662)
211 1tpg_A T-plasminogen activator 97.7 2.3E-05 7.8E-10 73.7 4.8 67 448-533 13-85 (91)
212 2bou_A EGF-like module contain 97.7 3.1E-05 1.1E-09 79.0 5.7 59 467-528 14-81 (143)
213 1fwx_A Nitrous oxide reductase 97.6 0.0005 1.7E-08 85.2 16.5 187 577-773 100-360 (595)
214 1apq_A Complement protease C1R 97.6 3.5E-05 1.2E-09 64.5 4.2 31 464-495 22-52 (53)
215 3pe7_A Oligogalacturonate lyas 97.6 0.0021 7.3E-08 75.2 20.4 223 549-776 61-331 (388)
216 1gxr_A ESG1, transducin-like e 97.4 0.13 4.4E-06 58.0 32.1 233 531-778 55-300 (337)
217 3c5m_A Oligogalacturonate lyas 97.2 0.0062 2.1E-07 71.1 18.6 183 549-735 61-281 (396)
218 3azo_A Aminopeptidase; POP fam 97.2 0.01 3.4E-07 75.2 21.4 197 576-775 88-326 (662)
219 2z3z_A Dipeptidyl aminopeptida 97.2 0.0092 3.1E-07 76.3 21.0 193 539-733 132-397 (706)
220 1z6c_A Vitamin K-dependent pro 97.1 0.00027 9.2E-09 65.7 4.3 46 447-497 39-87 (87)
221 3pe7_A Oligogalacturonate lyas 97.1 0.036 1.2E-06 64.6 23.8 200 572-778 41-277 (388)
222 2z3z_A Dipeptidyl aminopeptida 97.1 0.021 7.1E-07 72.9 23.3 232 533-776 87-393 (706)
223 4aez_A CDC20, WD repeat-contai 97.1 0.36 1.2E-05 56.7 32.4 221 540-775 105-337 (401)
224 2ynn_A Coatomer subunit beta'; 97.1 0.54 1.9E-05 52.9 32.4 240 531-781 17-266 (304)
225 1k8k_C P40, ARP2/3 complex 41 97.1 0.12 4E-06 59.4 27.2 230 531-774 12-274 (372)
226 1szb_A Mannose binding lectin- 97.1 0.00031 1E-08 73.9 4.4 51 481-535 113-168 (170)
227 1r5m_A SIR4-interacting protei 97.1 0.06 2E-06 62.9 24.8 229 532-775 113-362 (425)
228 2ecf_A Dipeptidyl peptidase IV 97.1 0.049 1.7E-06 69.9 26.0 194 569-771 111-366 (741)
229 3o4h_A Acylamino-acid-releasin 97.1 0.0096 3.3E-07 74.4 18.7 162 568-735 66-234 (582)
230 3zwl_B Eukaryotic translation 97.1 0.39 1.3E-05 54.6 31.0 196 532-733 37-255 (369)
231 3mkq_A Coatomer beta'-subunit; 97.1 0.24 8.2E-06 63.9 32.5 239 531-780 17-265 (814)
232 2ecf_A Dipeptidyl peptidase IV 97.0 0.017 5.9E-07 74.1 21.4 188 539-733 120-374 (741)
233 4aez_A CDC20, WD repeat-contai 97.0 0.24 8.2E-06 58.3 29.3 229 539-778 146-384 (401)
234 1lmj_A Fibrillin 1; EGF, calci 97.0 0.00027 9.1E-09 65.6 2.7 45 447-494 40-86 (86)
235 2vdu_B TRNA (guanine-N(7)-)-me 96.9 0.14 4.6E-06 61.5 26.9 154 568-729 104-273 (450)
236 2xyi_A Probable histone-bindin 96.9 0.077 2.6E-06 63.4 24.3 160 564-727 179-353 (430)
237 1x7a_L Coagulation factor IX, 96.9 0.00036 1.2E-08 71.5 3.1 56 441-499 73-130 (146)
238 4d90_A EGF-like repeat and dis 96.9 0.00081 2.8E-08 68.4 5.5 66 467-536 13-98 (143)
239 2pm9_A Protein WEB1, protein t 96.9 0.044 1.5E-06 64.2 21.4 206 566-781 67-301 (416)
240 2vh0_B Activated factor XA lig 96.9 0.00051 1.7E-08 69.3 3.7 60 441-506 67-129 (134)
241 2vdu_B TRNA (guanine-N(7)-)-me 96.9 0.41 1.4E-05 57.3 30.0 220 532-762 107-372 (450)
242 1gxr_A ESG1, transducin-like e 96.8 0.4 1.4E-05 53.8 28.3 183 540-731 110-300 (337)
243 2pm9_A Protein WEB1, protein t 96.8 0.077 2.6E-06 62.1 23.1 229 539-775 79-338 (416)
244 2xdw_A Prolyl endopeptidase; a 96.8 0.16 5.5E-06 65.0 27.7 202 569-777 127-371 (710)
245 4ery_A WD repeat-containing pr 96.8 0.7 2.4E-05 51.8 30.1 228 540-778 36-272 (312)
246 3ow8_A WD repeat-containing pr 96.8 0.61 2.1E-05 53.2 29.9 201 567-780 81-285 (321)
247 3ow8_A WD repeat-containing pr 96.8 0.52 1.8E-05 53.8 29.1 175 547-728 101-280 (321)
248 1nfu_B Coagulation factor XA, 96.8 0.00059 2E-08 73.1 3.7 60 441-506 67-129 (195)
249 3c5m_A Oligogalacturonate lyas 96.8 0.021 7.2E-07 66.5 17.4 202 569-777 38-276 (396)
250 3zwl_B Eukaryotic translation 96.8 0.81 2.8E-05 51.9 30.5 204 566-781 32-256 (369)
251 1r5m_A SIR4-interacting protei 96.8 0.54 1.8E-05 54.6 29.5 200 568-781 110-326 (425)
252 1aut_L Activated protein C; se 96.7 0.001 3.5E-08 65.1 4.6 43 453-498 55-97 (114)
253 1emn_A Fibrillin; extracellula 96.7 0.0008 2.7E-08 61.7 3.6 43 492-536 1-45 (82)
254 2gop_A Trilobed protease; beta 96.7 0.11 3.7E-06 59.5 22.5 165 547-724 42-250 (347)
255 2xyi_A Probable histone-bindin 96.7 0.2 6.9E-06 59.7 25.6 199 565-773 127-352 (430)
256 2c4f_L Coagulation factor VII 96.6 0.0013 4.3E-08 67.1 4.5 55 441-498 72-132 (142)
257 4gqb_B Methylosome protein 50; 96.6 0.26 8.8E-06 57.2 24.9 211 546-767 101-324 (344)
258 2ymu_A WD-40 repeat protein; u 96.6 0.49 1.7E-05 58.2 28.9 217 548-781 325-545 (577)
259 1nzi_A Complement C1S componen 96.6 0.0012 4E-08 68.4 4.2 50 481-534 106-158 (159)
260 2ymu_A WD-40 repeat protein; u 96.6 0.49 1.7E-05 58.1 28.7 218 547-781 283-504 (577)
261 4g56_B MGC81050 protein; prote 96.6 0.096 3.3E-06 61.0 21.0 194 567-771 140-340 (357)
262 3t5o_A Complement component C6 96.6 0.0011 3.8E-08 87.5 4.8 53 46-104 102-154 (913)
263 1pgu_A Actin interacting prote 96.6 0.27 9.2E-06 60.8 26.3 237 532-780 23-289 (615)
264 3odt_A Protein DOA1; ubiquitin 96.5 0.99 3.4E-05 49.9 28.5 216 547-781 38-262 (313)
265 2aq5_A Coronin-1A; WD40 repeat 96.5 0.51 1.7E-05 55.3 27.2 201 566-777 81-302 (402)
266 3ei3_B DNA damage-binding prot 96.4 0.32 1.1E-05 56.4 24.5 201 567-781 74-289 (383)
267 3o4h_A Acylamino-acid-releasin 96.4 0.063 2.1E-06 66.9 19.4 172 549-728 91-276 (582)
268 1vyh_C Platelet-activating fac 96.4 1.2 4E-05 52.7 29.7 238 532-781 113-376 (410)
269 3t5o_A Complement component C6 96.4 0.0014 4.7E-08 86.6 4.0 36 159-200 118-153 (913)
270 2aq5_A Coronin-1A; WD40 repeat 96.4 0.51 1.7E-05 55.3 26.1 186 562-755 127-324 (402)
271 3hxj_A Pyrrolo-quinoline quino 96.4 0.35 1.2E-05 54.6 23.7 211 540-777 71-286 (330)
272 3ei3_B DNA damage-binding prot 96.4 0.5 1.7E-05 54.8 25.4 188 541-733 88-289 (383)
273 1k8k_C P40, ARP2/3 complex 41 96.3 0.62 2.1E-05 53.2 25.6 201 567-781 9-240 (372)
274 4ery_A WD repeat-containing pr 96.3 0.91 3.1E-05 50.9 26.2 197 567-776 24-225 (312)
275 4a11_B DNA excision repair pro 96.3 0.32 1.1E-05 56.3 23.0 160 566-729 99-278 (408)
276 1k32_A Tricorn protease; prote 96.3 0.24 8.3E-06 66.5 24.8 197 548-762 226-440 (1045)
277 3mkq_A Coatomer beta'-subunit; 96.3 0.41 1.4E-05 61.7 26.2 204 566-780 13-223 (814)
278 1xfd_A DIP, dipeptidyl aminope 96.2 0.19 6.4E-06 64.1 22.6 178 548-729 91-347 (723)
279 2kl7_A Fibulin-4; secreted, ca 96.2 0.0032 1.1E-07 56.0 4.2 52 467-533 18-70 (71)
280 4a9v_A PHOX; hydrolase, beta-p 96.2 0.017 5.9E-07 70.9 11.6 106 608-714 383-549 (592)
281 3vl1_A 26S proteasome regulato 96.2 1.5 5.1E-05 51.2 28.5 212 548-771 119-362 (420)
282 3iuj_A Prolyl endopeptidase; h 96.2 0.45 1.6E-05 60.8 25.6 179 548-733 155-365 (693)
283 3hxj_A Pyrrolo-quinoline quino 96.1 0.61 2.1E-05 52.6 24.1 200 540-761 108-312 (330)
284 1vyh_C Platelet-activating fac 96.1 1.1 3.7E-05 53.0 27.2 160 565-731 107-269 (410)
285 2w2n_E LDL receptor, low-densi 96.1 0.0033 1.1E-07 60.7 3.9 46 490-537 24-71 (107)
286 3jrp_A Fusion protein of prote 96.1 0.73 2.5E-05 52.6 24.6 202 566-775 11-241 (379)
287 1erj_A Transcriptional repress 96.1 2.8 9.5E-05 49.0 29.9 200 569-781 126-348 (393)
288 1sq9_A Antiviral protein SKI8; 96.0 1.3 4.5E-05 51.1 26.7 158 567-730 122-325 (397)
289 3jrp_A Fusion protein of prote 96.0 1.4 4.6E-05 50.3 26.5 158 566-728 55-241 (379)
290 4e54_B DNA damage-binding prot 96.0 0.2 6.7E-06 59.9 20.0 154 567-725 120-280 (435)
291 1pgu_A Actin interacting prote 96.0 1 3.5E-05 55.4 27.1 204 565-774 115-328 (615)
292 4a5s_A Dipeptidyl peptidase 4 96.0 0.32 1.1E-05 62.6 23.0 113 655-773 263-399 (740)
293 1k32_A Tricorn protease; prote 96.0 0.11 3.7E-06 69.9 19.2 206 541-762 258-491 (1045)
294 3f1s_B Vitamin K-dependent pro 95.9 0.0031 1.1E-07 71.8 3.2 46 452-500 2-48 (283)
295 1xfd_A DIP, dipeptidyl aminope 95.9 0.23 8E-06 63.2 21.0 120 549-670 38-191 (723)
296 2ynn_A Coatomer subunit beta'; 95.9 1.6 5.4E-05 49.0 25.7 195 547-753 76-279 (304)
297 3h5c_B Vitamin K-dependent pro 95.8 0.0084 2.9E-07 69.3 6.5 58 440-500 29-89 (317)
298 1yfq_A Cell cycle arrest prote 95.8 0.39 1.3E-05 54.3 20.5 203 564-776 54-284 (342)
299 1erj_A Transcriptional repress 95.8 2 6.9E-05 50.2 27.4 176 547-728 144-342 (393)
300 2bkl_A Prolyl endopeptidase; m 95.8 1 3.5E-05 57.4 26.4 215 549-771 95-348 (695)
301 4e54_B DNA damage-binding prot 95.8 0.34 1.2E-05 57.8 20.6 190 531-726 123-326 (435)
302 2kl7_A Fibulin-4; secreted, ca 95.8 0.0061 2.1E-07 54.2 3.8 18 476-495 54-71 (71)
303 1yr2_A Prolyl oligopeptidase; 95.8 1.5 5.3E-05 56.2 28.1 195 568-771 164-392 (741)
304 1sq9_A Antiviral protein SKI8; 95.7 2.5 8.5E-05 48.7 27.1 234 540-780 27-328 (397)
305 1yr2_A Prolyl oligopeptidase; 95.6 0.66 2.3E-05 59.7 23.8 180 548-733 189-401 (741)
306 2w86_A Fibrillin-1, fibrillin1 95.6 0.0074 2.5E-07 61.6 4.3 42 494-535 2-44 (147)
307 3iz6_a 40S ribosomal protein R 95.6 2.9 0.0001 48.5 27.5 226 547-777 87-332 (380)
308 2xdw_A Prolyl endopeptidase; a 95.6 0.53 1.8E-05 60.2 22.6 194 576-776 81-322 (710)
309 1got_B GT-beta; complex (GTP-b 95.6 4.4 0.00015 46.2 32.9 223 547-781 76-308 (340)
310 3f1s_B Vitamin K-dependent pro 95.5 0.0064 2.2E-07 69.2 3.8 43 495-537 1-46 (283)
311 3vl1_A 26S proteasome regulato 95.5 0.9 3.1E-05 53.1 22.6 156 569-730 59-215 (420)
312 4aow_A Guanine nucleotide-bind 95.4 3.7 0.00013 45.9 26.5 161 566-731 86-250 (340)
313 2gop_A Trilobed protease; beta 95.3 0.38 1.3E-05 54.9 18.1 124 592-724 44-206 (347)
314 1edm_B Factor IX; epidermal gr 95.3 0.011 3.7E-07 45.8 3.3 30 495-524 2-33 (39)
315 4g56_B MGC81050 protein; prote 95.2 0.53 1.8E-05 54.6 19.1 173 547-725 160-341 (357)
316 3iuj_A Prolyl endopeptidase; h 95.2 0.75 2.6E-05 58.8 22.1 183 549-735 209-413 (693)
317 3dwl_C Actin-related protein 2 95.1 0.15 5.3E-06 58.9 14.0 156 566-728 55-237 (377)
318 4gqb_B Methylosome protein 50; 95.1 1.4 4.7E-05 51.0 22.1 176 532-713 132-317 (344)
319 1nr0_A Actin interacting prote 94.9 4.6 0.00016 50.4 27.9 236 539-781 30-277 (611)
320 1szb_A Mannose binding lectin- 94.9 0.014 4.7E-07 61.1 3.7 33 1295-1335 136-168 (170)
321 4a11_B DNA excision repair pro 94.9 3.6 0.00012 47.2 25.0 218 547-775 121-366 (408)
322 3frx_A Guanine nucleotide-bind 94.9 5.2 0.00018 45.1 25.8 181 540-728 78-268 (319)
323 3k26_A Polycomb protein EED; W 94.9 2 6.8E-05 48.6 22.4 113 567-683 70-191 (366)
324 3i2n_A WD repeat-containing pr 94.8 1.8 6.1E-05 48.9 21.7 195 567-772 19-241 (357)
325 3k26_A Polycomb protein EED; W 94.8 1.4 4.9E-05 49.8 20.7 157 566-727 18-192 (366)
326 3odt_A Protein DOA1; ubiquitin 94.7 5.6 0.00019 43.7 25.2 190 566-772 104-294 (313)
327 3f3f_A Nucleoporin SEH1; struc 94.7 4.9 0.00017 44.5 24.6 190 532-726 16-248 (351)
328 2pbi_B Guanine nucleotide-bind 94.6 8.4 0.00029 44.2 31.9 224 548-781 86-322 (354)
329 3i2n_A WD repeat-containing pr 94.6 7.5 0.00026 43.6 26.8 224 539-775 30-292 (357)
330 3f3f_A Nucleoporin SEH1; struc 94.6 5.2 0.00018 44.3 24.6 113 566-683 11-142 (351)
331 3gre_A Serine/threonine-protei 94.6 2.4 8.3E-05 49.8 22.8 214 564-782 109-367 (437)
332 3sfz_A APAF-1, apoptotic pepti 94.6 2.1 7E-05 58.3 25.0 232 537-782 808-1082(1249)
333 4a9v_A PHOX; hydrolase, beta-p 94.5 0.13 4.4E-06 63.3 11.4 105 566-671 383-550 (592)
334 1got_B GT-beta; complex (GTP-b 94.4 6.2 0.00021 44.9 25.1 161 567-735 144-309 (340)
335 1nzi_A Complement C1S componen 94.3 0.025 8.5E-07 58.3 3.9 42 451-495 116-158 (159)
336 3frx_A Guanine nucleotide-bind 94.2 8.6 0.00029 43.2 25.7 158 566-730 65-230 (319)
337 2pbi_B Guanine nucleotide-bind 94.2 3.4 0.00012 47.6 22.3 156 565-726 153-314 (354)
338 3v7d_B Cell division control p 94.1 12 0.0004 44.2 27.7 113 615-733 275-387 (464)
339 4a5s_A Dipeptidyl peptidase 4 94.1 2.1 7.3E-05 54.9 22.5 80 654-735 321-408 (740)
340 3sfz_A APAF-1, apoptotic pepti 94.0 12 0.00039 50.8 30.7 232 532-776 620-873 (1249)
341 2vj2_A Jagged-1; signalling, p 93.8 0.025 8.6E-07 59.2 2.8 47 473-524 112-163 (169)
342 2bkl_A Prolyl endopeptidase; m 93.8 1.4 4.8E-05 56.1 19.6 183 549-735 203-405 (695)
343 2ovr_B FBW7, F-BOX/WD repeat p 93.7 9.2 0.00031 45.1 25.6 212 548-781 139-355 (445)
344 3v7d_B Cell division control p 93.7 14 0.00049 43.5 27.3 214 547-776 141-383 (464)
345 1yfq_A Cell cycle arrest prote 93.7 3.4 0.00012 46.4 20.7 185 567-769 12-220 (342)
346 1gl4_A Nidogen-1, entactin; im 93.6 0.024 8.2E-07 63.5 2.2 42 494-537 3-48 (285)
347 3jro_A Fusion protein of prote 93.5 2.3 7.9E-05 54.7 21.3 199 567-773 10-237 (753)
348 1nr0_A Actin interacting prote 93.5 6.8 0.00023 48.8 24.9 199 567-778 19-225 (611)
349 1p22_A F-BOX/WD-repeat protein 93.5 14 0.00047 43.5 26.5 204 547-772 152-363 (435)
350 2xe4_A Oligopeptidase B; hydro 93.4 3.1 0.00011 53.6 22.1 196 569-771 176-397 (751)
351 2k2s_B Micronemal protein 6; m 93.3 0.029 9.9E-07 48.2 1.8 34 492-525 7-44 (61)
352 1gl4_A Nidogen-1, entactin; im 93.3 0.022 7.5E-07 63.8 1.4 44 451-499 4-49 (285)
353 1z68_A Fibroblast activation p 93.3 0.69 2.4E-05 58.9 15.5 217 548-775 90-394 (719)
354 3dm0_A Maltose-binding peripla 93.2 7.9 0.00027 48.9 25.2 191 531-727 386-592 (694)
355 3dwl_C Actin-related protein 2 93.1 1.2 4.2E-05 51.1 16.1 151 568-725 13-175 (377)
356 3dw8_B Serine/threonine-protei 93.0 17 0.00057 42.4 26.1 164 608-777 177-376 (447)
357 2ovr_B FBW7, F-BOX/WD repeat p 93.0 18 0.00061 42.5 27.5 215 548-781 179-398 (445)
358 1tpg_A T-plasminogen activator 92.9 0.02 6.9E-07 53.4 0.2 41 474-524 1-41 (91)
359 2ad6_A Methanol dehydrogenase 92.8 24 0.00083 43.7 28.6 31 750-781 471-501 (571)
360 3mmy_A MRNA export factor; mRN 92.8 11 0.00037 42.3 23.4 130 547-685 63-200 (368)
361 3dw8_B Serine/threonine-protei 92.7 3.1 0.00011 48.7 19.3 157 567-729 29-260 (447)
362 1tl2_A L10, protein (tachylect 92.7 6.8 0.00023 42.5 19.5 106 608-723 40-159 (236)
363 2pm7_B Protein transport prote 92.7 13 0.00044 41.2 23.5 155 567-726 10-188 (297)
364 1kb0_A Quinohemoprotein alcoho 92.7 24 0.00082 44.7 28.5 32 750-782 484-515 (677)
365 3b7f_A Glycosyl hydrolase, BNR 92.6 12 0.00042 43.6 24.1 215 568-795 116-391 (394)
366 1p22_A F-BOX/WD-repeat protein 92.6 17 0.0006 42.6 25.5 173 592-781 154-332 (435)
367 3jro_A Fusion protein of prote 92.4 3.6 0.00012 52.9 20.6 158 566-727 53-238 (753)
368 3u7u_G Neuregulin 1; signaling 92.1 0.078 2.7E-06 44.5 2.7 37 494-534 6-49 (55)
369 4h5i_A Guanine nucleotide-exch 92.1 4 0.00014 47.3 18.6 193 569-771 136-340 (365)
370 2xe4_A Oligopeptidase B; hydro 92.0 2.7 9.3E-05 54.2 18.7 190 576-774 124-354 (751)
371 1egf_A Epidermal growth factor 91.9 0.082 2.8E-06 44.0 2.7 36 495-534 2-44 (53)
372 2oit_A Nucleoporin 214KDA; NH2 91.9 5.3 0.00018 47.7 20.0 119 568-690 94-229 (434)
373 2xzm_R RACK1; ribosome, transl 91.8 21 0.0007 40.4 26.0 171 547-726 97-284 (343)
374 3iz6_a 40S ribosomal protein R 91.7 9.8 0.00034 44.0 21.6 202 566-780 66-286 (380)
375 3dm0_A Maltose-binding peripla 91.5 13 0.00045 46.8 24.2 201 565-776 381-594 (694)
376 3fm0_A Protein CIAO1; WDR39,SG 91.4 22 0.00077 40.2 26.2 142 566-713 61-212 (345)
377 4h5i_A Guanine nucleotide-exch 91.4 8.6 0.00029 44.4 20.5 180 539-725 145-341 (365)
378 4aow_A Guanine nucleotide-bind 91.3 21 0.00071 39.6 28.6 200 566-776 38-248 (340)
379 2k2s_B Micronemal protein 6; m 91.1 0.053 1.8E-06 46.6 0.7 40 452-499 11-54 (61)
380 1edm_B Factor IX; epidermal gr 91.1 0.15 5.1E-06 39.3 3.3 29 452-484 3-33 (39)
381 4a2l_A BT_4663, two-component 90.7 26 0.0009 45.0 26.2 191 569-775 359-572 (795)
382 2oaj_A Protein SNI1; WD40 repe 90.2 16 0.00054 48.0 23.7 199 567-776 18-244 (902)
383 3mmy_A MRNA export factor; mRN 90.1 15 0.00051 41.1 20.7 184 539-730 98-307 (368)
384 3v9f_A Two-component system se 90.1 15 0.0005 47.3 22.9 188 568-772 408-609 (781)
385 1tl2_A L10, protein (tachylect 89.8 8.6 0.0003 41.7 16.6 134 622-772 6-161 (236)
386 1z68_A Fibroblast activation p 89.7 0.85 2.9E-05 58.1 10.6 121 547-670 35-187 (719)
387 3gre_A Serine/threonine-protei 89.3 24 0.00082 41.1 22.2 201 566-782 63-300 (437)
388 3fm0_A Protein CIAO1; WDR39,SG 88.4 38 0.0013 38.3 22.7 188 568-768 18-219 (345)
389 4fbr_A Lectin, myxobacterial h 87.9 0.046 1.6E-06 60.9 -2.7 58 467-524 45-129 (267)
390 2zuy_A YESX protein; beta-prop 87.7 57 0.002 40.1 23.6 179 572-762 158-412 (620)
391 3b7f_A Glycosyl hydrolase, BNR 87.2 31 0.001 40.2 21.2 159 569-735 179-380 (394)
392 1k36_A Epiregulin; EGF-like fo 87.2 0.3 1E-05 39.3 2.4 36 495-534 2-43 (46)
393 3v9f_A Two-component system se 87.1 60 0.0021 41.5 25.7 191 568-775 364-569 (781)
394 2zux_A YESW protein; beta-prop 86.6 64 0.0022 39.6 23.1 179 572-762 154-408 (591)
395 3lrv_A PRE-mRNA-splicing facto 86.2 48 0.0016 37.2 26.5 153 567-726 126-291 (343)
396 2hes_X YDR267CP; beta-propelle 86.1 48 0.0017 37.1 24.7 155 567-725 59-228 (330)
397 1kb0_A Quinohemoprotein alcoho 85.6 83 0.0028 39.7 25.3 16 655-670 396-411 (677)
398 3q7m_A Lipoprotein YFGL, BAMB; 84.7 60 0.002 36.9 27.3 102 663-779 239-342 (376)
399 1sqj_A OXG-RCBH, oligoxylogluc 84.5 48 0.0016 42.8 22.7 166 567-733 64-275 (789)
400 1kv9_A Type II quinohemoprotei 84.4 27 0.00094 44.1 20.0 32 749-781 464-495 (668)
401 2xzm_R RACK1; ribosome, transl 84.3 59 0.002 36.5 25.9 154 608-772 76-242 (343)
402 1a3p_A Epidermal growth factor 84.3 0.61 2.1E-05 37.2 2.9 27 503-533 10-40 (45)
403 3u7u_G Neuregulin 1; signaling 83.8 0.54 1.9E-05 39.4 2.5 30 451-484 7-43 (55)
404 2oit_A Nucleoporin 214KDA; NH2 83.7 18 0.00062 43.0 17.1 145 610-759 94-255 (434)
405 2pm7_B Protein transport prote 83.3 58 0.002 35.7 24.6 177 548-727 31-238 (297)
406 1flg_A Protein (quinoprotein e 82.9 30 0.001 42.9 19.1 31 750-781 493-523 (582)
407 3zwu_A Alkaline phosphatase PH 82.6 5.1 0.00018 49.9 11.7 62 608-670 383-493 (592)
408 1egf_A Epidermal growth factor 82.5 0.82 2.8E-05 37.8 3.1 27 464-495 14-44 (53)
409 2ad6_A Methanol dehydrogenase 82.5 1E+02 0.0035 38.0 26.8 16 655-670 389-404 (571)
410 1g1s_A P-selectin; selectin, l 82.0 0.6 2E-05 47.9 2.6 29 467-500 132-160 (162)
411 3zwu_A Alkaline phosphatase PH 81.8 4.3 0.00015 50.5 10.6 105 565-670 382-549 (592)
412 1n1i_A Merozoite surface prote 80.7 1.6 5.6E-05 41.0 4.7 66 467-535 23-96 (105)
413 3bg1_A Protein SEC13 homolog; 80.6 45 0.0015 37.1 18.1 115 567-685 14-137 (316)
414 2oaj_A Protein SNI1; WD40 repe 79.0 75 0.0026 41.6 21.8 188 531-726 21-241 (902)
415 4a2l_A BT_4663, two-component 77.7 1.6E+02 0.0056 37.4 26.1 193 568-774 311-526 (795)
416 3ca7_A Protein spitz; argos, E 77.5 0.3 1E-05 40.4 -1.2 42 475-534 3-48 (52)
417 1w6s_A Methanol dehydrogenase 76.8 1.5E+02 0.0053 36.7 28.2 30 750-780 480-509 (599)
418 3vu4_A KMHSV2; beta-propeller 76.6 1.1E+02 0.0036 34.7 24.5 191 567-781 20-234 (355)
419 4fbr_A Lectin, myxobacterial h 76.5 0.21 7.3E-06 55.6 -3.1 53 467-524 112-196 (267)
420 1hae_A Heregulin-alpha; growth 75.5 1.1 3.9E-05 38.3 1.9 29 467-500 19-53 (63)
421 3vu4_A KMHSV2; beta-propeller 74.6 1.2E+02 0.0041 34.3 27.6 222 531-772 23-269 (355)
422 1hae_A Heregulin-alpha; growth 74.4 1.1 3.7E-05 38.4 1.5 33 497-533 7-46 (63)
423 1ob1_C Major merozoite surface 74.3 1.7 5.9E-05 40.6 2.9 54 468-524 18-83 (99)
424 1k36_A Epiregulin; EGF-like fo 74.2 2.5 8.6E-05 33.8 3.5 21 464-484 14-37 (46)
425 3q7m_A Lipoprotein YFGL, BAMB; 73.5 1.3E+02 0.0044 34.1 28.8 60 707-777 239-299 (376)
426 3f6k_A Sortilin; protein sorti 71.9 2.1E+02 0.0073 36.0 23.9 132 612-762 93-241 (685)
427 3lrv_A PRE-mRNA-splicing facto 71.6 1.3E+02 0.0045 33.5 23.7 115 609-727 126-244 (343)
428 3dem_A Complement factor MAsp- 70.9 2.8 9.6E-05 46.9 4.3 41 495-535 120-165 (278)
429 2ygq_A WIF-1, WNT inhibitory f 70.5 1.7 5.7E-05 50.2 2.4 74 440-535 232-309 (324)
430 1sqj_A OXG-RCBH, oligoxylogluc 70.3 1.1E+02 0.0036 39.5 19.5 161 567-732 15-206 (789)
431 1nt0_A MAsp2, mannose-binding 70.2 2.6 8.9E-05 47.5 3.8 33 502-534 131-163 (286)
432 1nt0_A MAsp2, mannose-binding 69.3 4 0.00014 46.0 5.1 33 1294-1334 131-163 (286)
433 1kv9_A Type II quinohemoprotei 67.6 2E+02 0.007 36.0 21.1 15 655-669 384-398 (668)
434 2cn3_A Xyloglucanase, beta-1,4 67.5 1.4E+02 0.0048 38.0 19.7 117 568-688 24-168 (737)
435 2gy5_A Angiopoietin-1 receptor 66.9 4.9 0.00017 48.0 5.4 51 471-535 259-321 (423)
436 3a0f_A Xyloglucanase; beta-pro 66.4 68 0.0023 41.2 16.5 124 609-733 21-170 (763)
437 1yiq_A Quinohemoprotein alcoho 65.5 2.8E+02 0.0095 34.9 29.8 32 749-781 481-512 (689)
438 1a3p_A Epidermal growth factor 65.1 3.6 0.00012 32.6 2.6 18 467-484 16-35 (45)
439 3ott_A Two-component system se 64.2 3E+02 0.01 34.8 22.7 213 539-776 32-262 (758)
440 4gga_A P55CDC, cell division c 64.0 2.1E+02 0.0071 32.9 28.7 156 608-771 230-392 (420)
441 4gga_A P55CDC, cell division c 63.7 2.1E+02 0.0072 32.9 31.0 183 540-728 117-311 (420)
442 2ygq_A WIF-1, WNT inhibitory f 63.7 3.9 0.00013 47.1 3.6 67 440-524 200-270 (324)
443 4gq1_A NUP37; propeller, trans 61.8 2.2E+02 0.0076 32.5 20.7 51 547-599 165-217 (393)
444 4ggc_A P55CDC, cell division c 61.4 1.8E+02 0.0061 31.3 29.8 185 541-731 38-234 (318)
445 3dem_A Complement factor MAsp- 61.0 3.8 0.00013 45.8 2.9 34 1294-1335 132-165 (278)
446 4ggc_A P55CDC, cell division c 58.9 2E+02 0.0067 31.0 30.1 152 608-767 150-308 (318)
447 1g1s_A P-selectin; selectin, l 57.0 5.7 0.0002 40.4 3.1 34 499-536 122-157 (162)
448 3fcs_B Integrin beta-3; beta p 54.6 13 0.00046 47.0 6.4 74 443-534 514-600 (690)
449 1nql_B Epidermal growth factor 53.7 5.7 0.00019 32.8 1.9 29 502-534 12-44 (53)
450 2vj2_A Jagged-1; signalling, p 52.4 4.5 0.00015 41.8 1.4 31 451-484 130-163 (169)
451 3bg1_A Protein SEC13 homolog; 51.5 2.8E+02 0.0094 30.4 23.7 74 566-641 57-137 (316)
452 3fcs_B Integrin beta-3; beta p 51.3 10 0.00036 47.9 4.7 64 453-533 484-559 (690)
453 3a0f_A Xyloglucanase; beta-pro 50.9 4.3E+02 0.015 33.5 20.1 187 569-765 546-754 (763)
454 2hes_X YDR267CP; beta-propelle 49.0 3.1E+02 0.011 30.3 25.1 150 568-726 16-183 (330)
455 3ott_A Two-component system se 48.5 5E+02 0.017 32.6 22.8 180 539-733 73-266 (758)
456 1w6s_A Methanol dehydrogenase 44.5 5.3E+02 0.018 31.7 28.2 18 653-670 394-411 (599)
457 2zux_A YESW protein; beta-prop 44.2 3.1E+02 0.011 33.6 15.6 127 594-726 271-422 (591)
458 1zgk_A Kelch-like ECH-associat 44.1 3.5E+02 0.012 29.5 22.4 170 578-762 70-270 (308)
459 2uvk_A YJHT; unknown function, 41.1 4.2E+02 0.014 29.5 18.5 176 578-762 19-260 (357)
460 2gy5_A Angiopoietin-1 receptor 41.0 12 0.00041 44.7 2.8 55 467-534 210-278 (423)
461 3cfw_A L-selectin; EGF, cell a 40.9 15 0.00051 37.3 3.2 29 467-500 132-160 (164)
462 1q4g_A Prostaglandin G/H synth 40.4 13 0.00044 45.9 3.0 36 496-535 2-41 (553)
463 2j04_B YDR362CP, TAU91; beta p 40.2 5.6E+02 0.019 30.8 21.5 155 566-726 207-385 (524)
464 1flg_A Protein (quinoprotein e 39.9 6E+02 0.021 31.0 21.1 16 655-670 415-430 (582)
465 2cn3_A Xyloglucanase, beta-1,4 39.2 1.6E+02 0.0056 37.4 13.3 122 610-731 24-168 (737)
466 3asi_A Neurexin-1-alpha; beta- 39.1 2.3E+02 0.0078 33.1 13.6 36 496-535 185-223 (410)
467 3nt1_A Prostaglandin-endoperox 32.4 20 0.00067 44.5 2.8 36 496-535 1-40 (587)
468 4gq1_A NUP37; propeller, trans 31.6 6.1E+02 0.021 28.6 21.3 74 609-683 137-217 (393)
469 2xbg_A YCF48-like protein; pho 31.1 5.8E+02 0.02 28.2 19.7 105 654-771 82-189 (327)
470 4asc_A Kelch repeat and BTB do 29.8 5.8E+02 0.02 27.8 16.8 127 578-714 98-250 (315)
471 3f6k_A Sortilin; protein sorti 29.7 9.3E+02 0.032 30.2 25.6 133 570-714 93-240 (685)
472 1yiq_A Quinohemoprotein alcoho 29.3 9.2E+02 0.031 30.0 25.0 16 700-715 239-254 (689)
473 4hvt_A Ritya.17583.B, post-pro 28.7 9.7E+02 0.033 30.1 22.5 123 608-733 286-435 (711)
474 4aqb_A Mannan-binding lectin s 28.1 34 0.0012 39.5 3.8 35 501-535 131-165 (361)
475 3ii7_A Kelch-like protein 7; p 27.5 6.1E+02 0.021 27.3 21.3 133 619-762 54-208 (306)
476 1b1v_A PSP1, protein (plasmato 27.4 32 0.0011 23.3 1.8 17 1315-1335 6-22 (26)
477 1nql_B Epidermal growth factor 26.7 23 0.0008 29.1 1.4 13 1309-1321 26-38 (53)
478 2zuy_A YESX protein; beta-prop 26.7 9.7E+02 0.033 29.5 16.0 127 594-726 275-426 (620)
479 2j04_A TAU60, YPL007P, hypothe 26.0 1E+03 0.034 29.3 18.9 183 531-726 90-296 (588)
480 3ii7_A Kelch-like protein 7; p 25.9 6.5E+02 0.022 27.1 24.4 173 577-762 54-255 (306)
481 1s1d_A Apyrase; adpase, five-b 25.7 2E+02 0.0069 32.4 9.1 56 706-762 103-159 (331)
482 2eqq_A GBP, growth-blocking pe 25.5 36 0.0012 23.4 1.9 17 1315-1335 6-22 (28)
483 2uvk_A YJHT; unknown function, 25.3 7.2E+02 0.025 27.4 20.4 125 631-762 168-324 (357)
484 2xbg_A YCF48-like protein; pho 23.3 7.8E+02 0.027 27.1 21.6 187 569-771 124-319 (327)
485 2vpj_A Kelch-like protein 12; 23.1 7.1E+02 0.024 26.6 25.3 171 577-762 61-261 (301)
486 3ltf_D Protein spitz; receptor 21.6 39 0.0013 28.3 1.9 21 511-535 29-49 (58)
487 3qcw_A Neurexin-1-alpha; synap 21.6 4.3E+02 0.015 35.8 13.2 35 496-534 1017-1054(1245)
488 1k3i_A Galactose oxidase precu 20.6 1.2E+03 0.042 28.4 20.3 137 577-715 252-418 (656)
489 3hx6_A Type 4 fimbrial biogene 20.2 3.7E+02 0.013 33.0 10.8 61 663-729 222-286 (570)
490 3qcw_A Neurexin-1-alpha; synap 20.2 1.5E+02 0.0051 40.3 8.2 38 492-533 186-226 (1245)
491 3sbq_A Nitrous-oxide reductase 20.1 1.2E+03 0.04 28.8 14.8 78 560-640 316-408 (638)
No 1
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=3.7e-119 Score=1164.53 Aligned_cols=661 Identities=40% Similarity=0.814 Sum_probs=378.2
Q ss_pred CCCCCceeecCCceeCCCcccCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCceecCC-CCceecCCcccCCCCCCCCCC
Q psy6572 67 TCGNDTFHCDMGMCIHKALRCDVDPDCPDASDEMH--CPMTNCTEKYPLMTNPIHCNF-TSACIEESYICDGQNDCFDMS 143 (1416)
Q Consensus 67 ~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~--C~~~~C~~~~~~~~~~f~C~~-~~~CI~~~~~CDg~~DC~D~s 143 (1416)
.|+..+|+|.+|+||+..|+|||..||.|+|||.+ |...+|++.+ |+|.+ .++|||..|+|||++||.|||
T Consensus 23 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~~~~------f~C~~~~~~Ci~~~~~CDg~~dC~dgs 96 (791)
T 3m0c_C 23 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGD------FSCGGRVNRCIPQFWRCDGQVDCDNGS 96 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcCccCCCCCCEEehhhcCCCCccCCCCCcccccccccCccCcCc------cccCCCCCCEeeccccCCCCcCcCCCc
Confidence 67888888888888888888888888888888886 7778898887 99987 369999999999999999999
Q ss_pred CccccccccCCCCCcCCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCCCCCccCCCCCceecCCCCceecC
Q psy6572 144 DEQNCDQIKDVSPKMNCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTESTCKANNNVFQCDNNKTCISK 223 (1416)
Q Consensus 144 DE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~~~C~~~~~~F~C~~~~~CI~~ 223 (1416)
||.+|. ..+|++.+|+|.+|+|||..|+|||+.||.|| |||.+|+. .+|.+ ++|+| .+++|||.
T Consensus 97 DE~~C~-------~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dg-----sDE~~C~~-~~C~~--~~f~C-~~~~Ci~~ 160 (791)
T 3m0c_C 97 DEQGCP-------PKTCSQDEFRCHDGKCISRQFVCDSDRDCLDG-----SDEASCPV-LTCGP--ASFQC-NSSTCIPQ 160 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCcc-------CccccCCeEECCCCCEECHHHcCCCcccCCCC-----cccccccc-ccccc--ceecc-CCCccccc
Confidence 999997 35799999999999999999999999999999 99999974 68998 99999 88999999
Q ss_pred cccccCCCCCCCCCCCCCCccc--------CCCCCCCceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCcccccccC
Q psy6572 224 SWVCDGTYDCTDRSDENSTYCA--------HSECNLFEFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETCME 295 (1416)
Q Consensus 224 ~w~CDg~~DC~D~sDE~~~~c~--------~~~C~~~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C~~ 295 (1416)
.|+|||+.||.|||||..+.|. ...|.+.+|+| .+|+||+..|+|||+.||.||||| .+|.. .+|.+
T Consensus 161 ~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C-~~g~Ci~~~~~CDg~~dC~dgsDE---~~C~~-~~C~~ 235 (791)
T 3m0c_C 161 LWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE---ENCAV-ATCRP 235 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCcccc-cCCceeccccccCCCCCCCCCCCC---CCccc-cccCC
Confidence 9999999999999999755563 35799999999 589999999999999999999999 57853 67999
Q ss_pred CeeecCCCceeccccccCCCCCCCCCCCcccccccccceeeCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCce
Q psy6572 296 GYFKCLNGRCLLENYYCDGENDCGDNSDEPIVSMWKLVWKCLNGRCLLENYYCDGENDCGDNSDEPPSCPKTDCDNSTHF 375 (1416)
Q Consensus 296 ~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~c~~~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~~~e~~~C~~~~c~~~~~f 375 (1416)
.+|+|.+|.||+.+|+|||..||.|||||.+| ... ..|. .+.+|
T Consensus 236 ~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C---------------------------~~~----~~C~-----~~~~~ 279 (791)
T 3m0c_C 236 DEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC---------------------------VNV----TLCE-----GPNKF 279 (791)
T ss_dssp --------------------------------------------------------------------CC-----STTCC
T ss_pred CcceecCCceEecceecCChhccccccccCcc---------------------------ccc----cccc-----CCCcc
Confidence 99999999999999999999999999999732 110 1232 26778
Q ss_pred eecCCcEeCCceeeCCcCCCCCCCCccccccccCCCCCCCCCCCceeeCCCeeecCCcccCCCCCCCCCCCCCCcccccc
Q psy6572 376 ECQNGNCIPSVLLCNGVNDCDDNSDEDMNHAECRSLKDLCKHPSHFLCSNGLCINETLTCNDINDCGDNSDEFSCFVNEC 455 (1416)
Q Consensus 376 ~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~~~C~~~~~~C~~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDe~~C~i~eC 455 (1416)
+|.+|.||+..++|++..||.|||||... .|.++||
T Consensus 280 ~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~~--------------------------------------------~C~~~~C 315 (791)
T 3m0c_C 280 KCHSGECITLDKVCNMARDCRDWSDEPIK--------------------------------------------ECGTNEC 315 (791)
T ss_dssp CCTTSCCCCSSCCSCSSCCSSSSCSCCCT--------------------------------------------TBSCCST
T ss_pred ccCCCcccccccccCCccccccccCcccc--------------------------------------------ccccccc
Confidence 88888899888889998889888888311 1234556
Q ss_pred cCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcEEecCCCceEe
Q psy6572 456 NVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 456 ~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
...+++ |+|.|++++++|+|.|++||+| .++++|++||||+ +++|+|+|+|++|+|+|.|++||+|.+++++|++
T Consensus 316 ~~~~~~--C~~~C~~~~~~y~C~C~~Gy~l--~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 316 LDNNGG--CSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp TTGGGG--CSSEEEECSBSEEEECCTTCEE--ETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred cccccC--ccccccCCCCCcccCCCCCCcc--CCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence 544445 9999999999999999999999 4788999999998 7899999999999999999999999999999999
Q ss_pred cCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-----CCeEEee-
Q psy6572 535 TSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-----QPELLFP- 607 (1416)
Q Consensus 535 ~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-----~~~~l~~- 607 (1416)
++ ..++|||++++.|+++.+++.. +.++.++..++||+||+..++|||+|...+ +|+++.+++ ..++++.
T Consensus 392 ~~-~~p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~--~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 392 VG-SIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp TT-SCCEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT--EEEEEEC--------CEEEECS
T ss_pred cc-cccccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccce--eEEEEeccCCCCCcceeEEEec
Confidence 85 4789999999999999999877 778889999999999999999999999864 899999983 3445554
Q ss_pred -cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 608 -ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 608 -l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
+..|.||||||++++|||+|...++|+|++++|+.+++|+...+..|+||||||.+|+||||||+..++|+|++|+|+.
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 8899999999999999999999999999999999999999999999999999999999999999987899999999999
Q ss_pred CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCe
Q psy6572 687 PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKS 766 (1416)
Q Consensus 687 r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~ 766 (1416)
+++|+...|.+|+|||||+.+++|||+|+++++|++++++|+.+++|+... ..+.+|++|++++++||||||.+++
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~----~~l~~P~glav~~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEA 624 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT----TTTSSEEEEEEETTEEEEEETTTTE
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCC----CccCCCCEEEEeCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999999998753 2489999999999999999999999
Q ss_pred eEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC----CCCCCccceeecCC-----CCccccCCCCeeec
Q psy6572 767 IERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE----NNGGCQGLCLLKPN-----GHRQCACPDNFILE 837 (1416)
Q Consensus 767 I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~----~NggCshlCl~~p~-----~~~~C~Cp~g~~L~ 837 (1416)
|++++|++|+.+.+|. ..+..|++|+|||+++| |.+.|||. +||+||||||++|. ++|+|+||+||+|+
T Consensus 625 I~~~dk~tG~~~~~l~-~~l~~P~~i~v~h~~~Q-p~~~N~C~~~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~ 702 (791)
T 3m0c_C 625 IFSANRLTGSDVNLLA-ENLLSPEDMVLFHNLTQ-PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 702 (791)
T ss_dssp EEEEETTTCCCCEEEE-CSCSCCCCEEEESGGGS-CCCCCTTTSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred EEEEeCCCCcceEEee-cCCCCceeEeeeccccC-CCCCCcccccCCCCcCcCeeecCCCCcCCCCCCceeECCCCCEEC
Confidence 9999999999998887 77899999999999999 88999997 58999999999985 27999999999999
Q ss_pred CCCceecccC
Q psy6572 838 SDGKTCRHNC 847 (1416)
Q Consensus 838 ~d~~tC~~~C 847 (1416)
.|+++|++..
T Consensus 703 ~d~~tC~~~~ 712 (791)
T 3m0c_C 703 RDMRSCLTEA 712 (791)
T ss_dssp TTSSCEEC--
T ss_pred CCCCcCCCCC
Confidence 9999998643
No 2
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1e-114 Score=1119.33 Aligned_cols=660 Identities=40% Similarity=0.823 Sum_probs=546.6
Q ss_pred CCCCCceeecCCceeCCCcccCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCceecCCC-CceecCCcccCCCCCCCCCC
Q psy6572 67 TCGNDTFHCDMGMCIHKALRCDVDPDCPDASDEMH--CPMTNCTEKYPLMTNPIHCNFT-SACIEESYICDGQNDCFDMS 143 (1416)
Q Consensus 67 ~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~--C~~~~C~~~~~~~~~~f~C~~~-~~CI~~~~~CDg~~DC~D~s 143 (1416)
+|.+.+|+|.+|+||+..|+|||..||.|+|||.+ |...+|+..+ |+|.++ ++|||..|+|||+.||.|||
T Consensus 5 ~C~~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~~~~------f~C~~~~~~Ci~~~~~Cdg~~dC~dgs 78 (699)
T 1n7d_A 5 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGD------FSCGGRVNRCIPQFWRCDGQVDCDNGS 78 (699)
T ss_dssp ---------------------------------------CCSCSSSS------CCCCC--CCCCCSSSTTSSSCCC-CCC
T ss_pred CCCccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCCcCCCCCc------cCCCCCCCceeCcceecCCcccCCCCc
Confidence 57778888888888888888888888888888887 8888898887 999875 58999999999999999999
Q ss_pred CccccccccCCCCCcCCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCCCCCccCCCCCceecCCCCceecC
Q psy6572 144 DEQNCDQIKDVSPKMNCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTESTCKANNNVFQCDNNKTCISK 223 (1416)
Q Consensus 144 DE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~~~C~~~~~~F~C~~~~~CI~~ 223 (1416)
||.+|. ..+|++.+|+|.+|+||+..|+|||+.||.|| |||.+|+. .+|.+ .+|+| .+++|||.
T Consensus 79 DE~~C~-------~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dg-----sDE~~C~~-~~C~~--~~f~C-~~~~Ci~~ 142 (699)
T 1n7d_A 79 DEQGCP-------PKTCSQDEFRCHDGKCISRQFVCDSDRDCLDG-----SDEASCPV-LTCGP--ASFQC-NSSTCIPQ 142 (699)
T ss_dssp TTTSCS-------SCCCCSSCCCSSCC----CCCTTCSSCCSSSS-----CSSSSCCC-CCCCS--SCCCC-SSSCCCCT
T ss_pred ccCccc-------ccccccCcEEcCCCCEecHHHcCCCcCcCCCC-----CccCCcCc-cccCc--cccCC-CCCcccch
Confidence 999997 35799999999999999999999999999999 99999974 78998 99999 88999999
Q ss_pred cccccCCCCCCCCCCCCCCccc--------CCCCCCCceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCcccccccC
Q psy6572 224 SWVCDGTYDCTDRSDENSTYCA--------HSECNLFEFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETCME 295 (1416)
Q Consensus 224 ~w~CDg~~DC~D~sDE~~~~c~--------~~~C~~~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C~~ 295 (1416)
.|+|||+.||.|||||....|. ...|.++||+| .+|+|||..|+|||+.||.||||| .+|. ..+|.+
T Consensus 143 ~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C-~~g~Ci~~~~~CDg~~dC~dgsDE---~~C~-~~~C~~ 217 (699)
T 1n7d_A 143 LWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE---ENCA-VATCRP 217 (699)
T ss_dssp TSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCC-SSSCCCSTTCTTSSSCCSTTSCSS---CSCC-CCCCCS
T ss_pred hcccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceec-CCCceEechhccCCCCCCCCCccc---ccCC-CcccCC
Confidence 9999999999999999332364 24799999999 688999999999999999999999 6796 368999
Q ss_pred CeeecCCCceeccccccCCCCCCCCCCCcccccccccceeeCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCce
Q psy6572 296 GYFKCLNGRCLLENYYCDGENDCGDNSDEPIVSMWKLVWKCLNGRCLLENYYCDGENDCGDNSDEPPSCPKTDCDNSTHF 375 (1416)
Q Consensus 296 ~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~c~~~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~~~e~~~C~~~~c~~~~~f 375 (1416)
.+|+|.+|+||+.+|+|||..||.|||||.. |.. ...|. .+.+|
T Consensus 218 ~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~---------------------------C~~----~~~C~-----~~~~~ 261 (699)
T 1n7d_A 218 DEFQCSDGNCIHGSRQCDREYDCKDMSDEVG---------------------------CVN----VTLCE-----GPNKF 261 (699)
T ss_dssp SEEESSSSCEEETTCCSSSCCCSSSSCSSSS---------------------------TTC----CCCCC-----STTCC
T ss_pred CcEecCCCceeeeecccCCCCCCCCCCccCC---------------------------CCC----CCccc-----CCCce
Confidence 9999999999999999999999999999973 211 01242 26778
Q ss_pred eecCCcEeCCceeeCCcCCCCCCCCccccccccCCCCCCCCCCCceeeCCCeeecCCcccCCCCCCCCCCCCCCcccccc
Q psy6572 376 ECQNGNCIPSVLLCNGVNDCDDNSDEDMNHAECRSLKDLCKHPSHFLCSNGLCINETLTCNDINDCGDNSDEFSCFVNEC 455 (1416)
Q Consensus 376 ~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~~~C~~~~~~C~~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDe~~C~i~eC 455 (1416)
+|.+|.||+..++||+..||.|+|||... .|+++||
T Consensus 262 ~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~--------------------------------------------~C~~~eC 297 (699)
T 1n7d_A 262 KCHSGECITLDKVCNMARDCRDWSDEPIK--------------------------------------------ECGTNEC 297 (699)
T ss_dssp CCTTSCCCCSSCCSCSSCCSSSSCSCCCS--------------------------------------------SCCCCCT
T ss_pred ecCCCcEeCCcccccccceecCccccccc--------------------------------------------ccccccc
Confidence 88888899888889988888888888310 1235567
Q ss_pred cCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcEEecCCCceEe
Q psy6572 456 NVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 456 ~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
...+++ |+|.|++++++|+|.|++||+| .++++|++||||+ +++|+|+|+|++|+|+|.|++||+|..++++|++
T Consensus 298 ~~~~~~--C~~~C~~~~~~~~C~C~~G~~~--~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 298 LDNNGG--CSHVCNDLKIGYECLCPDGFQL--VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp TSSTTT--SCTTCCCCTTCCCCCCCSSSCC--CSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred cccccC--cCCCcccCCCCcEEeCCCCeEc--CCCCcccCccccCCCCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence 655556 9999999999999999999998 4788999999998 7899999999999999999999999999999998
Q ss_pred cCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-----CCeEEee-
Q psy6572 535 TSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-----QPELLFP- 607 (1416)
Q Consensus 535 ~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-----~~~~l~~- 607 (1416)
+ ...++|||++++.|+++.+++.. +.++..+.+++||+||+.+++|||+|...+ +|+++.+++ ..++++.
T Consensus 374 ~-~~~~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~--~I~~~~~~g~~~~~~~~~~i~~ 450 (699)
T 1n7d_A 374 V-GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISR 450 (699)
T ss_dssp C-SSCCCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTT--SBEEEESCCCCC-CCCCCBCCS
T ss_pred c-ccceeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCC--eEEEEecCCCCCCcceEEEEeC
Confidence 7 45789999999999999998876 566677889999999999999999999854 899998873 2333333
Q ss_pred -cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 608 -ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 608 -l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
+..|.||||||++++|||+|...++|+|++++|..+++|+...+..|++|||||..|+||||||+..++|+|++|+|+.
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 7789999999999999999999999999999999999999888999999999999999999999876799999999999
Q ss_pred CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCe
Q psy6572 687 PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKS 766 (1416)
Q Consensus 687 r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~ 766 (1416)
+++|+...|.+|+|||||+.+++|||+|+..++|++++++|+++++|+... ..+.+|++|++++++|||++|.+++
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~----~~~~~P~glavd~~~lywtd~~~~~ 606 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEA 606 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCS----SSCSSCCCCEEETTEEEEECSTTTC
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecC----CcCCCceEeEEECCEEEEEeCCCCe
Confidence 999998889999999999999999999999999999999999999887642 1378999999999999999999999
Q ss_pred eEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-C---CCCCccceeecCC-----CCccccCCCCeeec
Q psy6572 767 IERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-N---NGGCQGLCLLKPN-----GHRQCACPDNFILE 837 (1416)
Q Consensus 767 I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~---NggCshlCl~~p~-----~~~~C~Cp~g~~L~ 837 (1416)
|.++++++|+.+++|. ..+.+|++|+|||+.+| |.+.|||. + ||+||||||++|. ++|+|+||+||+|.
T Consensus 607 V~~~d~~~G~~~~~i~-~~~~~P~~i~v~~~~~q-p~~~n~C~~~~~~ng~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~ 684 (699)
T 1n7d_A 607 IFSANRLTGSDVNLLA-ENLLSPEDMVLFHQLTQ-PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 684 (699)
T ss_dssp EEEEETTTEEEEECCC-TTCSSCCCCCBCSSSSS-CCSCCSSCSSSCSSCSCTTCCBCCCCCTTCSCSCBCCCCSSCEEC
T ss_pred EEEEEccCCCceEEee-cCCCCCcEEEEeCcccC-CCCCCCccccCCCCCCCCcccCcCcccCCCCCCcEEECcCCCEEC
Confidence 9999999998877775 56788999999999999 88999998 5 8999999999873 37999999999999
Q ss_pred CCCceeccc
Q psy6572 838 SDGKTCRHN 846 (1416)
Q Consensus 838 ~d~~tC~~~ 846 (1416)
.|+++|++.
T Consensus 685 ~d~~~C~~~ 693 (699)
T 1n7d_A 685 RDMRSCLTE 693 (699)
T ss_dssp SSTTCEECC
T ss_pred CCCCccCCC
Confidence 999999864
No 3
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.7e-89 Score=887.50 Aligned_cols=600 Identities=32% Similarity=0.696 Sum_probs=270.6
Q ss_pred CCCccCCCcEEecCCeEecccccccCCCCCCCCCCCCC--C--CCCCCCceeecC--CceeCCCcccCCCCCCCCCCCCC
Q psy6572 27 AMRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEAD--C--STCGNDTFHCDM--GMCIHKALRCDVDPDCPDASDEM 100 (1416)
Q Consensus 27 ~~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~--C--~~C~~~~f~C~~--g~Ci~~~~~Cdg~~dC~d~sDE~ 100 (1416)
...+|++++|+|.||+||+..|+|||++||.|||||.+ | .+|.+.+|+|.+ |+|||..|+|||..||.|+|||.
T Consensus 20 ~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~ 99 (791)
T 3m0c_C 20 VGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQ 99 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCcCcCccCCCCCCEEehhhcCCCCccCCCCCcccccccccCccCcCccccCCCCCCEeeccccCCCCcCcCCCcccC
Confidence 35689999999999999999999999999999999998 7 589999999998 89999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCceecCCCCceecCCcccCCCCCCCCCCCccccccccCCCCCcCCCCCCcccCCCceecCceeec
Q psy6572 101 HCPMTNCTEKYPLMTNPIHCNFTSACIEESYICDGQNDCFDMSDEQNCDQIKDVSPKMNCSGDKFLCRNGNCILSRWRCD 180 (1416)
Q Consensus 101 ~C~~~~C~~~~~~~~~~f~C~~~~~CI~~~~~CDg~~DC~D~sDE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~~~~~CD 180 (1416)
+|+..+|++.+ |+|.+ ++||+.+|+|||+.||.|||||.+|. ..+|++.+|+|.+|+|||..|+||
T Consensus 100 ~C~~~~C~~~~------f~C~~-g~Ci~~~~~CDg~~dC~dgsDE~~C~-------~~~C~~~~f~C~~~~Ci~~~~~Cd 165 (791)
T 3m0c_C 100 GCPPKTCSQDE------FRCHD-GKCISRQFVCDSDRDCLDGSDEASCP-------VLTCGPASFQCNSSTCIPQLWACD 165 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCccccCCe------EECCC-CCEECHHHcCCCcccCCCCccccccc-------ccccccceeccCCCccccccccCC
Confidence 99988999887 99986 58999999999999999999999997 357999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC--CCC-------CCCccCCCCCceecCCCCceecCcccccCCCCCCCCCCCCCCcccCCCCCC
Q psy6572 181 GDNDCNDGNDGLSSDEM--NCD-------TESTCKANNNVFQCDNNKTCISKSWVCDGTYDCTDRSDENSTYCAHSECNL 251 (1416)
Q Consensus 181 g~~DC~Dg~d~~~sDE~--~C~-------~~~~C~~~~~~F~C~~~~~CI~~~w~CDg~~DC~D~sDE~~~~c~~~~C~~ 251 (1416)
|+.||.|| |||. +|. ...+|.+ ++|+| .+++||+.+|+|||+.||.|+|||.+ |...+|.+
T Consensus 166 g~~dC~dg-----sDE~~~~C~~~~~~~~~~~~C~~--~~f~C-~~g~Ci~~~~~CDg~~dC~dgsDE~~--C~~~~C~~ 235 (791)
T 3m0c_C 166 NDPDCEDG-----SDEWPQRCRGLYVFQGDSSPCSA--FEFHC-LSGECIHSSWRCDGGPDCKDKSDEEN--CAVATCRP 235 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCCCC-----CCcccccCCCccccCCCCCCCCC--Ccccc-cCCceeccccccCCCCCCCCCCCCCC--ccccccCC
Confidence 99999999 8886 684 1357988 99999 78999999999999999999999987 66678999
Q ss_pred CceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCcccccc-cCCeeecCCCceeccccccCCCCCCCCCCCccccccc
Q psy6572 252 FEFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETC-MEGYFKCLNGRCLLENYYCDGENDCGDNSDEPIVSMW 330 (1416)
Q Consensus 252 ~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C-~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~c~~~ 330 (1416)
.+|+| .++.||+..|+|||..||.||||| .+|.....| .+.+|+|.+|.||+..++||+..||.|||||..
T Consensus 236 ~~f~C-~~g~Ci~~~~~Cdg~~dC~dgsDE---~~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~---- 307 (791)
T 3m0c_C 236 DEFQC-SDGNCIHGSRQCDREYDCKDMSDE---VGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPI---- 307 (791)
T ss_dssp -----------------------------------------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCC----
T ss_pred Cccee-cCCceEecceecCChhcccccccc---CcccccccccCCCccccCCCcccccccccCCccccccccCccc----
Confidence 99999 689999999999999999999999 568654557 478999999999999999999999999999962
Q ss_pred ccceeeCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCceeecCCcEeCCceeeCCcCCCCCCCCccccccccCC
Q psy6572 331 KLVWKCLNGRCLLENYYCDGENDCGDNSDEPPSCPKTDCDNSTHFECQNGNCIPSVLLCNGVNDCDDNSDEDMNHAECRS 410 (1416)
Q Consensus 331 ~~~f~C~~g~Ci~~~~~Cdg~~dC~d~~~e~~~C~~~~c~~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~~~C~~ 410 (1416)
..|. ...|. .+ ++.|. +.|.+
T Consensus 308 ---------------------~~C~-----~~~C~------~~-----~~~C~----------------------~~C~~ 328 (791)
T 3m0c_C 308 ---------------------KECG-----TNECL------DN-----NGGCS----------------------HVCND 328 (791)
T ss_dssp ---------------------TTBS-----CCSTT------TG-----GGGCS----------------------SEEEE
T ss_pred ---------------------cccc-----ccccc------cc-----ccCcc----------------------ccccC
Confidence 0111 01121 00 01110 12222
Q ss_pred CCCCCCCCCceeeCCCeeecCCcccCCCCCCCCCCCCCCc-ccccccCCCCCCcccccceecCCceEEeeCCCceecCCC
Q psy6572 411 LKDLCKHPSHFLCSNGLCINETLTCNDINDCGDNSDEFSC-FVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPED 489 (1416)
Q Consensus 411 ~~~~C~~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDe~~C-~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d 489 (1416)
. ++.|.|. |.+...+ .+...| +|+||. .++. |+|.|+|++++|+|.|++||+|. .+
T Consensus 329 ~------~~~y~C~---C~~Gy~l----------~~g~~C~dideC~-~~~~--C~~~C~n~~gsy~C~C~~Gy~l~-~~ 385 (791)
T 3m0c_C 329 L------KIGYECL---CPDGFQL----------VAQRRCEDIDECQ-DPDT--CSQLCVNLEGGYKCQCEEGFQLD-PH 385 (791)
T ss_dssp C------SBSEEEE---CCTTCEE----------ETTTEEECCCCCS-SSSS--CTTTCCBCSSCBCCCCCSSEECC-SS
T ss_pred C------CCCcccC---CCCCCcc----------CCCCccccCcccC-CCCC--CCCeeecCCCCceeecCCCCEeC-CC
Confidence 1 3344442 2221111 123445 578886 3344 99999999999999999999998 78
Q ss_pred CCccccCCcCCCCCccceeeecCCeeeecCC-CCcE-EecCCCceEec--CCCCCeEEEEec--EEEEEEecCCc----c
Q psy6572 490 KHLCVDTNECLDRPCSHYCRNTLGSYSCSCA-PGYA-LLSDKHGCKAT--SDVPPNLLFTNK--YYIREVTQAGV----M 559 (1416)
Q Consensus 490 ~~tC~didEC~~~~Csq~C~nt~gsy~C~C~-~Gy~-L~~dg~sC~a~--~~~~~~li~s~~--~~I~~i~l~g~----~ 559 (1416)
+++|++++++. ..+..+....++-.-. ..|. |....+..+++ +.....|||++. ..|+++.+++. .
T Consensus 386 ~~~C~~~~~~p----~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~ 461 (791)
T 3m0c_C 386 TKACKAVGSIA----YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS 461 (791)
T ss_dssp CCCCEETTSCC----EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------
T ss_pred Cceeeeccccc----ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc
Confidence 89999998753 2244444443332221 2343 34444444443 334678898874 57999999873 2
Q ss_pred --eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCC-CeE
Q psy6572 560 --TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGL-DTI 633 (1416)
Q Consensus 560 --~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~-~~I 633 (1416)
.++..++..|.||||||.+++|||+|...+ +|+++.++ +.+++|+. +..|+||||||..++|||||++. .+|
T Consensus 462 ~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~--~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 462 YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred eeEEEecCCCCcceeeeeecCCcEEEEecCCC--eEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeE
Confidence 344448899999999999999999999864 99999999 55566665 88999999999999999999987 899
Q ss_pred EEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec--CCCCCeeEEeecCCCeEE
Q psy6572 634 EVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK--NLSWPNALTISYETNELF 711 (1416)
Q Consensus 634 ~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~l~~P~gLaiD~~~~rLY 711 (1416)
++++|+|+.+++|+...+.+|+|||||+..++|||+|++.. +|++++|+|+.+++|+.. .+.+|.||+| .+++||
T Consensus 540 ~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~-~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lY 616 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVF 616 (791)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEE
T ss_pred EEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC-cEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEE
Confidence 99999999999999999999999999999999999998754 999999999999999985 3667777777 478999
Q ss_pred EecCCCCeEEEEe-CCCCceEEEEeccCCCCcccccceeEEEecCc
Q psy6572 712 WGDAHEDYIAVSD-LNGENIKIIVSRRMDPTINLHHVFALAVFEDH 756 (1416)
Q Consensus 712 WtD~~~~~I~~~~-ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~ 756 (1416)
|+|+.+++|++++ ++|+.+++|... +.+|++|+|++..
T Consensus 617 wtD~~~~~I~~~dk~tG~~~~~l~~~-------l~~P~~i~v~h~~ 655 (791)
T 3m0c_C 617 WTDIINEAIFSANRLTGSDVNLLAEN-------LLSPEDMVLFHNL 655 (791)
T ss_dssp EEETTTTEEEEEETTTCCCCEEEECS-------CSCCCCEEEESGG
T ss_pred EEECCCCEEEEEeCCCCcceEEeecC-------CCCceeEeeeccc
Confidence 9999999999998 789998888653 8899999999765
No 4
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=8.8e-86 Score=849.83 Aligned_cols=599 Identities=32% Similarity=0.687 Sum_probs=440.1
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCCCC--C--CCCCCCceeecCC--ceeCCCcccCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEAD--C--STCGNDTFHCDMG--MCIHKALRCDVDPDCPDASDEMH 101 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~--C--~~C~~~~f~C~~g--~Ci~~~~~Cdg~~dC~d~sDE~~ 101 (1416)
..+|++++|+|.||+||+..|+|||++||+|||||.+ | .+|+..+|+|.+| +|||..|+|||..||.|+|||.+
T Consensus 3 ~~~C~~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~ 82 (699)
T 1n7d_A 3 GDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQG 82 (699)
T ss_dssp -----------------------------------------CCSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTS
T ss_pred cCCCCccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCCcCCCCCccCCCCCCCceeCcceecCCcccCCCCcccCc
Confidence 3579999999999999999999999999999999998 8 4799999999974 89999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCceecCCCCceecCCcccCCCCCCCCCCCccccccccCCCCCcCCCCCCcccCCCceecCceeecC
Q psy6572 102 CPMTNCTEKYPLMTNPIHCNFTSACIEESYICDGQNDCFDMSDEQNCDQIKDVSPKMNCSGDKFLCRNGNCILSRWRCDG 181 (1416)
Q Consensus 102 C~~~~C~~~~~~~~~~f~C~~~~~CI~~~~~CDg~~DC~D~sDE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~~~~~CDg 181 (1416)
|+..+|.+.+ |+|.+ ++||+.+|+|||+.||.|||||.+|. ..+|++.+|+|.+|+|||..|+|||
T Consensus 83 C~~~~C~~~~------f~C~~-g~Ci~~~~~Cdg~~dC~dgsDE~~C~-------~~~C~~~~f~C~~~~Ci~~~~~Cdg 148 (699)
T 1n7d_A 83 CPPKTCSQDE------FRCHD-GKCISRQFVCDSDRDCLDGSDEASCP-------VLTCGPASFQCNSSTCIPQLWACDN 148 (699)
T ss_dssp CSSCCCCSSC------CCSSC-C----CCCTTCSSCCSSSSCSSSSCC-------CCCCCSSCCCCSSSCCCCTTSTTCS
T ss_pred ccccccccCc------EEcCC-CCEecHHHcCCCcCcCCCCCccCCcC-------ccccCccccCCCCCcccchhcccCC
Confidence 9988999887 99976 58999999999999999999999997 4689999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC--CCCCC-------CCccCCCCCceecCCCCceecCcccccCCCCCCCCCCCCCCcccCCCCCCC
Q psy6572 182 DNDCNDGNDGLSSDE--MNCDT-------ESTCKANNNVFQCDNNKTCISKSWVCDGTYDCTDRSDENSTYCAHSECNLF 252 (1416)
Q Consensus 182 ~~DC~Dg~d~~~sDE--~~C~~-------~~~C~~~~~~F~C~~~~~CI~~~w~CDg~~DC~D~sDE~~~~c~~~~C~~~ 252 (1416)
+.||.|| ||| .+|.. ..+|.+ ++|+| .+++||+.+|+|||+.||.|||||.+ |...+|.+.
T Consensus 149 ~~dC~dg-----sDE~~~~C~~~~~~~~~~~~C~~--~~f~C-~~g~Ci~~~~~CDg~~dC~dgsDE~~--C~~~~C~~~ 218 (699)
T 1n7d_A 149 DPDCEDG-----SDEWPQRCRGLYVFQGDSSPCSA--FEFHC-LSGECIHSSWRCDGGPDCKDKSDEEN--CAVATCRPD 218 (699)
T ss_dssp SCCSSSS-----SSSSCSSSSCCCCCSSCCCCSCS--SSCCC-SSSCCCSTTCTTSSSCCSTTSCSSCS--CCCCCCCSS
T ss_pred CCcCCCC-----cccccccCCCcccccCCCCCCCC--cceec-CCCceEechhccCCCCCCCCCccccc--CCCcccCCC
Confidence 9999999 899 89952 247998 99999 78899999999999999999999987 777789999
Q ss_pred ceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCcccccc-cCCeeecCCCceeccccccCCCCCCCCCCCcccccccc
Q psy6572 253 EFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETC-MEGYFKCLNGRCLLENYYCDGENDCGDNSDEPIVSMWK 331 (1416)
Q Consensus 253 ~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C-~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~c~~~~ 331 (1416)
+|+| .+++||+..|+|||..||.||||| .+|.....| .+.+|+|.+|.||+..++||+..||.|||||...
T Consensus 219 ~f~C-~~g~Ci~~~~~Cdg~~dC~dgsde---~~C~~~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~---- 290 (699)
T 1n7d_A 219 EFQC-SDGNCIHGSRQCDREYDCKDMSDE---VGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK---- 290 (699)
T ss_dssp EEES-SSSCEEETTCCSSSCCCSSSSCSS---SSTTCCCCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCS----
T ss_pred cEec-CCCceeeeecccCCCCCCCCCCcc---CCCCCCCcccCCCceecCCCcEeCCcccccccceecCccccccc----
Confidence 9999 589999999999999999999999 678655578 5789999999999999999999999999999620
Q ss_pred cceeeCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCceeecCCcEeCCceeeCCcCCCCCCCCccccccccCCC
Q psy6572 332 LVWKCLNGRCLLENYYCDGENDCGDNSDEPPSCPKTDCDNSTHFECQNGNCIPSVLLCNGVNDCDDNSDEDMNHAECRSL 411 (1416)
Q Consensus 332 ~~f~C~~g~Ci~~~~~Cdg~~dC~d~~~e~~~C~~~~c~~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~~~C~~~ 411 (1416)
.|+ .+.|..+ ++.| .+.|.+.
T Consensus 291 ---------------~C~-~~eC~~~---------------------~~~C----------------------~~~C~~~ 311 (699)
T 1n7d_A 291 ---------------ECG-TNECLDN---------------------NGGC----------------------SHVCNDL 311 (699)
T ss_dssp ---------------SCC-CCCTTSS---------------------TTTS----------------------CTTCCCC
T ss_pred ---------------ccc-ccccccc---------------------ccCc----------------------CCCcccC
Confidence 010 1111110 0111 0122221
Q ss_pred CCCCCCCCceeeCCCeeecCCcccCCCCCCCCCCCCCCc-ccccccCCCCCCcccccceecCCceEEeeCCCceecCCCC
Q psy6572 412 KDLCKHPSHFLCSNGLCINETLTCNDINDCGDNSDEFSC-FVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDK 490 (1416)
Q Consensus 412 ~~~C~~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDe~~C-~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~ 490 (1416)
++.|.|. |.+...+ .|...| +|+||.. ++. |+|.|+|++++|+|.|++||+|. .++
T Consensus 312 ------~~~~~C~---C~~G~~~----------~~~~~C~dideC~~-~~~--C~~~C~n~~g~y~C~C~~G~~~~-~~~ 368 (699)
T 1n7d_A 312 ------KIGYECL---CPDGFQL----------VAQRRCEDIDECQD-PDT--CSQLCVNLEGGYKCQCEEGFQLD-PHT 368 (699)
T ss_dssp ------TTCCCCC---CCSSSCC----------CSSSCCCCCCCCSS-SSS--CTTTCCBCSSCBCCCCCSSCBCC-SSC
T ss_pred ------CCCcEEe---CCCCeEc----------CCCCcccCccccCC-CCc--cccccccCCCCeeeeeecccccC-CCC
Confidence 3344443 3332221 123445 5788863 334 99999999999999999999998 678
Q ss_pred CccccCCcCCCCCccceeeecCCeeeecCCC-CcEE-ecCCCc--eEecCCCCCeEEEEe--cEEEEEEecCC----cc-
Q psy6572 491 HLCVDTNECLDRPCSHYCRNTLGSYSCSCAP-GYAL-LSDKHG--CKATSDVPPNLLFTN--KYYIREVTQAG----VM- 559 (1416)
Q Consensus 491 ~tC~didEC~~~~Csq~C~nt~gsy~C~C~~-Gy~L-~~dg~s--C~a~~~~~~~li~s~--~~~I~~i~l~g----~~- 559 (1416)
++|+++++.. ..+..+...-++..-.. .|.. ....+. -.+.+.....|||++ ...|+++.+++ ..
T Consensus 369 ~~C~~~~~~~----~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~ 444 (699)
T 1n7d_A 369 KACKAVGSIA----YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 444 (699)
T ss_dssp CCCBCCSSCC----CBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC
T ss_pred Ccccccccce----eEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce
Confidence 8999876532 22333433333322221 1221 122222 233333456888886 45799999886 33
Q ss_pred -eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCC-CeEE
Q psy6572 560 -TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGL-DTIE 634 (1416)
Q Consensus 560 -~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~-~~I~ 634 (1416)
.++..++..|.||+|||.+++|||+|...+ +|+++.++ ..+++|+. +..|.+|||||.+++|||||++. ++|+
T Consensus 445 ~~~i~~~~~~P~glavD~~~g~LY~tD~~~~--~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 445 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp CCBCCSCC--CCCEECCCSSSBCEECCTTTS--CEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred EEEEeCCCCCcceEEEEeeCCcEEEEeccCC--eEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEE
Confidence 344456788999999999999999998854 89999998 44555554 78999999999999999999886 8999
Q ss_pred EeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec--CCCCCeeEEeecCCCeEEE
Q psy6572 635 VAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK--NLSWPNALTISYETNELFW 712 (1416)
Q Consensus 635 v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~l~~P~gLaiD~~~~rLYW 712 (1416)
+++|+|+.+++|+...+.+|+||||||..++|||+|++. .+|++++++|+.+++|+.. .+.+|.||+|| .++|||
T Consensus 523 ~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~-~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd--~~~lyw 599 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFW 599 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT-TEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--TTEEEE
T ss_pred EEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC-CeEEEEccCCCceEEEEecCCcCCCceEeEEE--CCEEEE
Confidence 999999999999888899999999999999999999765 4999999999999999863 57899999997 469999
Q ss_pred ecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEecCc
Q psy6572 713 GDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVFEDH 756 (1416)
Q Consensus 713 tD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~~d~ 756 (1416)
+|+..++|.+++. +|+.+++|.. . +.+|++|+|+...
T Consensus 600 td~~~~~V~~~d~~~G~~~~~i~~-~------~~~P~~i~v~~~~ 637 (699)
T 1n7d_A 600 TDIINEAIFSANRLTGSDVNLLAE-N------LLSPEDMVLFHQL 637 (699)
T ss_dssp ECSTTTCEEEEETTTEEEEECCCT-T------CSSCCCCCBCSSS
T ss_pred EeCCCCeEEEEEccCCCceEEeec-C------CCCCcEEEEeCcc
Confidence 9999999999995 6776665533 2 6789999987654
No 5
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.7e-65 Score=618.63 Aligned_cols=380 Identities=38% Similarity=0.751 Sum_probs=348.9
Q ss_pred ccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcEEecCCCc
Q psy6572 453 NECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSDKHG 531 (1416)
Q Consensus 453 ~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~s 531 (1416)
+||...+.+ |+|.|++++++|+|.|++||+|. ++++|+++|||+ +++|+|.|+|++|+|+|.|.+||.|..++++
T Consensus 1 ~eC~~~~~~--c~~~C~~~~~~y~C~C~~G~~~~--~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~ 76 (400)
T 3p5b_L 1 NECLDNNGG--CSHVCNDLKIGYECLCPDGFQLV--AQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKA 76 (400)
T ss_dssp CCTTTTGGG--CSSEEEECSSSEEEECCTTEEEC--SSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSS
T ss_pred CcccCCCCC--CCCEeECCCCCeEEECCCCCCcC--CCCcccCchhhhccCCCCCccCCCccceeeeccccccccccccc
Confidence 467655555 99999999999999999999993 788999999998 7899999999999999999999999999999
Q ss_pred eEecCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-----CCeEE
Q psy6572 532 CKATSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-----QPELL 605 (1416)
Q Consensus 532 C~a~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-----~~~~l 605 (1416)
|++.. ..++|||++++.|+++++++.. +.++..+.+++||+||+.+++|||+|...+ +|+|+.+++ ..+++
T Consensus 77 C~~~~-~~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~--~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 77 CKAVG-SIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp CCCST-TSCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTT--EEEEEEC------CCCEEE
T ss_pred eeecc-ccceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCC--eEEEEEcccCCCCCcceEE
Confidence 99984 5799999999999999999887 777889999999999999999999999864 899999883 24444
Q ss_pred ee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 606 FP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 606 ~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
+. +..|.||||||++++|||+|...++|++++++|+.+++|+...+..|++|||||..|+||||||+..++|+|++|+
T Consensus 154 ~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 154 ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 44 8899999999999999999999999999999999999999889999999999999999999999987899999999
Q ss_pred CCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecC
Q psy6572 684 GSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWE 763 (1416)
Q Consensus 684 Gs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~ 763 (1416)
|+.+++++...+.+|+|||||+.+++|||+|+.+++|++++++|+++++|+... ..+.+|++|++++++||||||.
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~----~~l~~P~gl~v~~~~lywtd~~ 309 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE----KRLAHPFSLAVFEDKVFWTDII 309 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS----STTSSEEEEEEETTEEEEEESS
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC----CCCCCCEEEEEeCCEEEEecCC
Confidence 999999999999999999999999999999999999999999999999998753 1389999999999999999999
Q ss_pred CCeeEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC----CCCCCccceeecCCC-----CccccCCCCe
Q psy6572 764 MKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE----NNGGCQGLCLLKPNG-----HRQCACPDNF 834 (1416)
Q Consensus 764 ~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~----~NggCshlCl~~p~~-----~~~C~Cp~g~ 834 (1416)
+++|++++|.+|+...+|. ..+.+|++|+|||+.+| |.+.|||. +||+|+||||+.|.. +|+|+||+||
T Consensus 310 ~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~~~~q-p~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~ 387 (400)
T 3p5b_L 310 NEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHNLTQ-PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGM 387 (400)
T ss_dssp SCSEEEEESSSCCCCEEEE-CSCSCEEEEEEESGGGS-CCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTC
T ss_pred CCeEEEEEcCCCCceEEEe-cCCCCCceEEEEeeccC-CCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCC
Confidence 9999999999999988887 77889999999999999 88999994 689999999998753 7999999999
Q ss_pred eecCCCceecc
Q psy6572 835 ILESDGKTCRH 845 (1416)
Q Consensus 835 ~L~~d~~tC~~ 845 (1416)
.|..|+++|++
T Consensus 388 ~l~~d~~~C~~ 398 (400)
T 3p5b_L 388 LLARDMRSCLT 398 (400)
T ss_dssp EECTTSSSEES
T ss_pred EECCCCCccCC
Confidence 99999999975
No 6
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-65 Score=614.08 Aligned_cols=378 Identities=44% Similarity=0.859 Sum_probs=304.3
Q ss_pred ccccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcEEecCC
Q psy6572 451 FVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSDK 529 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg 529 (1416)
+++||...+++ |+|.|.+++++|+|.|++||+|. .++++|++++||+ .++|+|.|+|++|+|+|.|++||.|.+++
T Consensus 2 ~~~~C~~~~~~--c~~~C~~~~g~~~C~C~~G~~l~-~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~ 78 (386)
T 3v65_B 2 GEENCNVNNGG--CAQKCQMIRGAVQCTCHTGYRLT-EDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDR 78 (386)
T ss_dssp -----------------------------------------------------CCTTEEC-----CCEECCTTEEECTTS
T ss_pred CcCcccCCCCC--CCCCCcCCCCCcEeECCCCceEC-CCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCC
Confidence 36788766767 99999999999999999999998 7889999999997 78999999999999999999999999999
Q ss_pred CceEecCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee
Q psy6572 530 HGCKATSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP 607 (1416)
Q Consensus 530 ~sC~a~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~ 607 (1416)
++|++.+. +++|++++++.|+++++++.. +.++.++..+.||+||+.+++|||+|...+ +|+|+.++ +..++++.
T Consensus 79 ~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~--~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD--RILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECSS-CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTT--EEEEEETTSCCEEEEEC
T ss_pred CeECCccc-cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCC--cEEEEecCCCCcEEEEe
Confidence 99999865 899999999999999999877 778889999999999999999999999854 99999999 55555544
Q ss_pred --cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 608 --ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 608 --l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
+..|.||||||.+++|||+|...++|++++++|+.+++|+...+..|++|||||..|+|||+||+..++|+|++|+|+
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 789999999999999999999999999999999999999988999999999999999999999987679999999999
Q ss_pred CCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCC
Q psy6572 686 NPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMK 765 (1416)
Q Consensus 686 ~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~ 765 (1416)
.+++++...+.+|+|||||+.+++|||+|+..++|++++++|+++++++... +.+|++|++++++||||||.++
T Consensus 236 ~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~------~~~P~giav~~~~ly~td~~~~ 309 (386)
T 3v65_B 236 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG------LPHPFAITVFEDSLYWTDWHTK 309 (386)
T ss_dssp SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS------CSSEEEEEEETTEEEEEETTTT
T ss_pred CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC------CCCceEEEEECCEEEEeeCCCC
Confidence 9999999899999999999999999999999999999999999999888765 8899999999999999999999
Q ss_pred eeEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-CCCCCccceeecCCCCccccCCCCeeecCCCceec
Q psy6572 766 SIERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCR 844 (1416)
Q Consensus 766 ~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~ 844 (1416)
+|.+++|.+|...++|. ..+..|++|+|+|+.+| |.+.|||. +||+|+||||++|. +|+|+||+||+ ..|+++|+
T Consensus 310 ~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~~~~~q-~~~~n~C~~~ng~C~~lCl~~~~-~~~C~C~~g~~-~~d~~~C~ 385 (386)
T 3v65_B 310 SINSANKFTGKNQEIIR-NKLHFPMDIHTLHPQRQ-PAGKNRCGDNNGGCTHLCLPSGQ-NYTCACPTGFR-KINSHACA 385 (386)
T ss_dssp EEEEEETTTCCSCEEEE-CSCSCCCCEEEESGGGS-CCCCCTTTTSCTTSSSEEECCSS-SCEEECCTTCB-CSSSSCCB
T ss_pred eEEEEECCCCcceEEEc-cCCCCCceEEEEchhcC-cCCcCccccCCCCCCceeeeCCC-CCeeECCCCCc-CCCCCccC
Confidence 99999999999988887 77889999999999999 88999999 89999999999986 89999999999 89999996
No 7
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-59 Score=554.88 Aligned_cols=337 Identities=44% Similarity=0.847 Sum_probs=307.1
Q ss_pred CCcCC-CCCccceeeecCCeeeecCCCCcEEecCCCceEecCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeee
Q psy6572 496 TNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLD 573 (1416)
Q Consensus 496 idEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~ 573 (1416)
||||+ ++.|+|+|+|++|+|+|.|++||.|.+|+++|++.+. +++|+|++++.|+++.+++.. ++++.++..+.||+
T Consensus 1 i~ec~~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~ 79 (349)
T 3v64_C 1 VNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALD 79 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS-CCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEE
T ss_pred CcccCCCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc-CceeEeecccceEEEeCCCCeeEEeecCCCceEEEE
Confidence 57887 7899999999999999999999999999999999866 899999999999999999987 77788899999999
Q ss_pred eecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCC
Q psy6572 574 FDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKG 650 (1416)
Q Consensus 574 ~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~ 650 (1416)
||+.+++|||+|...+ +|+|+.++ +..+.++. +..|.||||||.+++|||+|...++|++++++|+.+++|+...
T Consensus 80 ~d~~~~~ly~~D~~~~--~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~ 157 (349)
T 3v64_C 80 FHHRRELVFWSDVTLD--RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS 157 (349)
T ss_dssp EETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT
T ss_pred EeccccEEEEEeccCC--ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC
Confidence 9999999999999854 99999999 55555554 7899999999999999999999999999999999999999888
Q ss_pred CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCce
Q psy6572 651 LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENI 730 (1416)
Q Consensus 651 l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r 730 (1416)
+..|++|||||..|+||||||+..++|+|++|||+.+++++...+.+|+|||||+.+++|||+|+..++|++++++|+++
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 99999999999999999999987679999999999999999889999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-
Q psy6572 731 KIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE- 809 (1416)
Q Consensus 731 ~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~- 809 (1416)
++++... +.+|++|++++++||||||.+++|.+++|.+|+..++|. ..+..|++|+|+|+.+| |.+.|||.
T Consensus 238 ~~~~~~~------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~~~~~q-p~~~n~C~~ 309 (349)
T 3v64_C 238 KAVISQG------LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR-NKLHFPMDIHTLHPQRQ-PAGKNRCGD 309 (349)
T ss_dssp EEEECSS------CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE-CSCSCCCCEEEECGGGS-CCCCCTTTT
T ss_pred EEEEeCC------CCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec-cCCCCCceEEEEccccC-ccccCcccC
Confidence 9988765 899999999999999999999999999999999988887 77889999999999999 88999999
Q ss_pred CCCCCccceeecCCCCccccCCCCeeecCCCceecc
Q psy6572 810 NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCRH 845 (1416)
Q Consensus 810 ~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~~ 845 (1416)
+||+|+||||++|. +|+|+||+||+ +.|+++|++
T Consensus 310 ~~g~C~~lCl~~~~-~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 310 NNGGCTHLCLPSGQ-NYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp GGGGCSSEEECCTT-SCEEECCTTEE-EETTTEEEE
T ss_pred CCCCcccEeecCCC-CCeeECCCCCc-CCCCCcccc
Confidence 88999999999986 89999999999 899999975
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=4.6e-56 Score=565.20 Aligned_cols=338 Identities=31% Similarity=0.617 Sum_probs=309.2
Q ss_pred cCCcCC--CCCccceeeecC-CeeeecCCCCcEEecCCCceEecCCCCCeEEEEecEEEEEEecCCcc----eEEecccc
Q psy6572 495 DTNECL--DRPCSHYCRNTL-GSYSCSCAPGYALLSDKHGCKATSDVPPNLLFTNKYYIREVTQAGVM----TIRIHNQT 567 (1416)
Q Consensus 495 didEC~--~~~Csq~C~nt~-gsy~C~C~~Gy~L~~dg~sC~a~~~~~~~li~s~~~~I~~i~l~g~~----~~~~~~l~ 567 (1416)
.+|||+ ++.|+|+|++++ ++|+|.|++||.|.+|+++|++. .++|+|+++..|+++.+++.. .+++.++.
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~---~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~ 340 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP---TTFLLFSQKSAINRMVIDEQQSPDIILPIHSLR 340 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC---SSEEEEEETTEEEEECCCTTCCCCEECCCTTCS
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc---cceeeeeccceEEEEecccccCceEEEEehhcC
Confidence 679998 589999999999 99999999999999999999975 689999999999999987653 34567889
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCe-EEee-------cCCCceEEEEccCCcEEEeeCCCCeEEEeec
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPE-LLFP-------ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~-~l~~-------l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l 638 (1416)
++++|+||+.+++|||+|.... +|+|+.++ +..+ ++.. +..|.||||||++++|||||...++|+|+++
T Consensus 341 ~~~~ld~d~~~~~iy~sD~~~~--~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~ 418 (628)
T 4a0p_A 341 NVRAIDYDPLDKQLYWIDSRQN--MIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRL 418 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CceEEEEecCCCeEEEEecCcc--eEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEEC
Confidence 9999999999999999999854 89999998 4443 3332 5689999999999999999999999999999
Q ss_pred CCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCc-eEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCC
Q psy6572 639 DGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNA-HIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHE 717 (1416)
Q Consensus 639 dG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~-~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~ 717 (1416)
+|+.+++|+...+..|++|||||.+|+||||||+..+ +|+|++|||+++++|+...+.||+|||||+.+++|||+|+++
T Consensus 419 ~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 419 DGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp TSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 9999999998899999999999999999999999875 999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeeecc
Q psy6572 718 DYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHP 797 (1416)
Q Consensus 718 ~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~ 797 (1416)
++|++++++|++|++++... +.||+||++++++||||||.+++|++++|.+|...++|. ..+..|++|+++|.
T Consensus 499 ~~I~~~~~dG~~r~~~~~~~------~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~-~~~~~~~~i~~~~~ 571 (628)
T 4a0p_A 499 RRIESSDLSGANRIVLEDSN------ILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQ-ARIAQLSDIHAVKE 571 (628)
T ss_dssp TEEEEEETTSCSCEEEECSS------CSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEE-CCCTTEEEEEEECC
T ss_pred CEEEEEeCCCCceEEEEcCC------CCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEe-ccCCCCcceEEEee
Confidence 99999999999999998754 899999999999999999999999999999999988887 66788999999998
Q ss_pred cCCCCCCCCCCC-CCCCCccceeecCCCCccccCCCCeeecCCCceec
Q psy6572 798 YRQTPLKDNPCE-NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCR 844 (1416)
Q Consensus 798 ~~q~p~~~npC~-~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~ 844 (1416)
..|.+.+.|||+ +||+|+|||++.|.+.++|+||+||.|.+|+++|.
T Consensus 572 ~~~~~~~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~ 619 (628)
T 4a0p_A 572 LNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG 619 (628)
T ss_dssp CCHHHHHHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEE
T ss_pred cccCccccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCC
Confidence 765345789999 89999999999998889999999999999999985
No 9
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=6.3e-55 Score=554.31 Aligned_cols=336 Identities=38% Similarity=0.823 Sum_probs=308.1
Q ss_pred cCCcCC--CCCccceeeecCC--eeeecCCCCcEEecCCCceEecCCCCCeEEEEecEEEEEEecCCcc----eEEeccc
Q psy6572 495 DTNECL--DRPCSHYCRNTLG--SYSCSCAPGYALLSDKHGCKATSDVPPNLLFTNKYYIREVTQAGVM----TIRIHNQ 566 (1416)
Q Consensus 495 didEC~--~~~Csq~C~nt~g--sy~C~C~~Gy~L~~dg~sC~a~~~~~~~li~s~~~~I~~i~l~g~~----~~~~~~l 566 (1416)
..++|+ ++.|||+|++++. +|+|.|++||.|.+|+++|++. .+++|+|+.+..|+++.+++.. .+.+.++
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~--~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l 348 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG--ATELLLLARRTDLRRISLDTPDFTDIVLQLEDI 348 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSS--CSEEEEEEESSCEEEEESSSTTCCCEECCCSCC
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCC--CceEEEEEcccceEEEecCCCccceeEEecccc
Confidence 467887 5899999999874 7999999999999999999874 4789999999999999998765 2345678
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
.+++||+||+.+++|||+|.... +|+|+.++ +..++++. +..|.||||||++++|||||.+.++|+|++++|+.+
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~--~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVR--AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCC--eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence 99999999999999999999854 99999999 56666665 789999999999999999999999999999999999
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVS 723 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~ 723 (1416)
++|+...+..|++|||||.+|+||||||+..++|+|+.|||+.+++|+...+.||+|||||+.+++|||+|+++++|+++
T Consensus 427 ~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 427 KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 99998899999999999999999999999888999999999999999998999999999999999999999999999999
Q ss_pred eCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeeecccCCCCC
Q psy6572 724 DLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPL 803 (1416)
Q Consensus 724 ~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~ 803 (1416)
+++|+.+++++... +.+|+||++++++||||||.+++|++++|.+| ..++++ ..+..||+|+|||+..| .
T Consensus 507 ~~dG~~~~~~~~~~------l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~-~~~~~~~~i~~~~~~~~--~ 576 (619)
T 3s94_A 507 NTDGTGRRVLVEDK------IPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVII-DQLPDLMGLKATNVHRV--I 576 (619)
T ss_dssp ESSSCCCEEEEECC------CCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEE-CSCCCEEEEEEEESSCC--C
T ss_pred ecCCCceEEEeccC------CCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEe-cCCCCCceeeecccccc--c
Confidence 99999999998755 89999999999999999999999999999999 556666 77889999999999876 4
Q ss_pred CCCCCC-CCCCCccceeecCCCCccccCCCCeeecCCCceecc
Q psy6572 804 KDNPCE-NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCRH 845 (1416)
Q Consensus 804 ~~npC~-~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~~ 845 (1416)
+.|||. +||+|+|+|+++|+ +++|+||.||.|..|+++|.+
T Consensus 577 ~~~~C~~~ng~C~~~C~~~~~-~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCSHLCLYRPQ-GLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCSSEEEEETT-EEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChhHhhccCCC-CeEEECCCCCEECCCCCcCCC
Confidence 899999 89999999999986 599999999999999999975
No 10
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=7.6e-51 Score=476.91 Aligned_cols=298 Identities=43% Similarity=0.863 Sum_probs=275.3
Q ss_pred CCCeEEEEecEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-Ce-EEee-cCC
Q psy6572 538 VPPNLLFTNKYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-PE-LLFP-ATS 610 (1416)
Q Consensus 538 ~~~~li~s~~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~~-~l~~-l~~ 610 (1416)
++|+|||++++.|+++++++.. ++++.++.++++|+||+.+++|||+|.... +|+|+.++ +. .+ ++.. +..
T Consensus 3 ~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~--~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 3 SAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEE--AIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp -CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTT--EEEEEETTSSSCCCEEEEECCSC
T ss_pred CccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCC--cEEEEEccCCCceEEEEcCCCCC
Confidence 4789999999999999999873 677888999999999999999999999854 99999998 32 23 3334 889
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
|.||||||.+++|||+|...++|++++++|..+++|+...+..|+||||||..|+||||||+..++|+|++|||+.++++
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 99999999999999999999999999999999999998899999999999999999999998778999999999999999
Q ss_pred eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEe
Q psy6572 691 ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~ 770 (1416)
+...+.+|+|||||+.+++|||+|+..++|++++++|+++++++... +.+|++|+++++.||||||.+++|.++
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~------~~~P~glav~~~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILAC 234 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC------CSCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC------CCCceEEEEeCCEEEEEecCCCeEEEE
Confidence 98899999999999999999999999999999999999999998754 899999999999999999999999999
Q ss_pred cccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-CCCCCccceeecCCC-CccccCCCCeeecCCCceecc
Q psy6572 771 DKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-NNGGCQGLCLLKPNG-HRQCACPDNFILESDGKTCRH 845 (1416)
Q Consensus 771 nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~NggCshlCl~~p~~-~~~C~Cp~g~~L~~d~~tC~~ 845 (1416)
++.+|+..++|. ..+.+|++|+|||+.+| |...|||. +||+||||||++|.+ +|+|+||+||.|..|+++|..
T Consensus 235 ~~~~G~~~~~i~-~~~~~P~~i~v~~~~~q-~~~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 235 NKYTGEGLREIH-SDIFSPMDIHAFSQQRQ-PNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp ETTTCCSCEEEE-CCCSSCCCEEEECGGGS-CCCCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred ECCCCCceEEEe-CCCCCCcEEEEeccccc-cccccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 999999888877 67789999999999999 78899998 899999999999876 799999999999999999975
No 11
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=2.4e-48 Score=455.67 Aligned_cols=299 Identities=37% Similarity=0.690 Sum_probs=271.2
Q ss_pred CCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-----CCeEEee--cCC
Q psy6572 539 PPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-----QPELLFP--ATS 610 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-----~~~~l~~--l~~ 610 (1416)
+|+|||++++.|+++++++.. +.++..+.+|.||+||+.+++|||+|...+ +|+++.+++ ..++++. +..
T Consensus 1 ~~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp CCEEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT--EEEEEEC--------CEEEECSSCSC
T ss_pred CCEEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCC--cEEEEECCCCCCCcccEEEEeCCCCC
Confidence 489999999999999999877 667778999999999999999999999854 999999874 3344443 789
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
|.||||||.+++|||+|...++|++++++|..+++|+...+..|++|||||..|+|||+||+..++|+|++|||+.++++
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 158 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE
Confidence 99999999999999999999999999999999999988889999999999999999999998657999999999999999
Q ss_pred eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEe
Q psy6572 691 ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~ 770 (1416)
+...+.+|+||+||+.+++|||+|+..++|++++++|+++++++... ..+.+|++|++++++|||+||.+++|.++
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~----~~~~~P~giav~~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSA 234 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT----TTTSSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecC----CccCCcEEEEEECCEEEEEECCCCeEEEE
Confidence 88889999999999999999999999999999999999999988642 13789999999999999999999999999
Q ss_pred cccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-C---CCCCccceeecCC-----CCccccCCCCeeecCCCc
Q psy6572 771 DKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-N---NGGCQGLCLLKPN-----GHRQCACPDNFILESDGK 841 (1416)
Q Consensus 771 nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~---NggCshlCl~~p~-----~~~~C~Cp~g~~L~~d~~ 841 (1416)
++.+|+..+++. ..+..|++|+|+|+.+| |.+.|||. + ||+||||||++|. ++|+|+||+||.|..|++
T Consensus 235 ~~~~g~~~~~i~-~~~~~p~~i~v~~~~~q-p~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~ 312 (316)
T 1ijq_A 235 NRLTGSDVNLLA-ENLLSPEDMVLFHNLTQ-PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMR 312 (316)
T ss_dssp ETTTCCCCEEEE-CSCSCCCCEEEESGGGS-CCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSS
T ss_pred eCCCCcceEEEe-cCCCCceEEEEeccccC-CcccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCC
Confidence 999999888887 66788999999999999 88999998 6 9999999999984 589999999999999999
Q ss_pred eecc
Q psy6572 842 TCRH 845 (1416)
Q Consensus 842 tC~~ 845 (1416)
+|.+
T Consensus 313 ~C~~ 316 (316)
T 1ijq_A 313 SCLT 316 (316)
T ss_dssp CEEC
T ss_pred ccCC
Confidence 9963
No 12
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=7e-48 Score=490.08 Aligned_cols=297 Identities=40% Similarity=0.781 Sum_probs=273.1
Q ss_pred CCCCeEEEEecEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCC
Q psy6572 537 DVPPNLLFTNKYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATS 610 (1416)
Q Consensus 537 ~~~~~li~s~~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~ 610 (1416)
.++++|+|++++.|+++++++.. .+.+.++.+++||+||+.+++|||+|...+ +|+|+.++ +..++++. +..
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~--~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLK--TISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCSC
T ss_pred CCCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCC--eEEEEECCCCCcEEEEeCCCCC
Confidence 35789999999999999999865 234567889999999999999999999854 99999999 56666665 788
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
|.||||||++++|||+|...++|+|++++|+.+++|+...+..|++|||||.+|+||||||+..++|+|++|||+.+++|
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999888999999999999999
Q ss_pred eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEe
Q psy6572 691 ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~ 770 (1416)
+. .+.+|+|||||+.+++|||+|++.++|++++++|+.++++.. . +.+|++|++++++||||||.+++|+++
T Consensus 162 ~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~-~------l~~P~glav~~~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 162 VP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD-D------LPHPFGLTQYQDYIYWTDWSRRSIERA 233 (628)
T ss_dssp EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-C------CSCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred EC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec-c------CCCceEEEEECCEEEEecCCCCEEEEE
Confidence 85 799999999999999999999999999999999999976543 3 899999999999999999999999999
Q ss_pred cccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-CCCCCccceeecCCCCccccCCCCeeecCCCceeccc
Q psy6572 771 DKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCRHN 846 (1416)
Q Consensus 771 nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~~~ 846 (1416)
+|.+|+.+++|. ..+..|++|+|||+.+| | +.|||+ +||+|+|||+++|.++|+|+||.||.|..|+++|.+.
T Consensus 234 dk~tg~~~~~l~-~~~~~p~~i~v~~~~~q-~-~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 234 NKTSGQNRTIIQ-GHLDYVMDILVFHSSRQ-S-GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp ETTTCCSCEEEE-CSCCSCCEEEEECGGGS-C-CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred ECCCCCceEEEe-cCCCCcceeeeeeeccc-c-cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 999999988887 77789999999999999 4 789999 8899999999999789999999999999999999864
No 13
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=4.5e-48 Score=491.43 Aligned_cols=298 Identities=43% Similarity=0.854 Sum_probs=262.9
Q ss_pred CCCeEEEEecEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-CeEEee--cCC
Q psy6572 538 VPPNLLFTNKYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-PELLFP--ATS 610 (1416)
Q Consensus 538 ~~~~li~s~~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~~~l~~--l~~ 610 (1416)
..|+|++++++.|+++++++.. ++++.++.+|+||+||+.+++|||+|...+ +|+|+.++ +. .++++. +..
T Consensus 8 ~~~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~--~I~r~~~~g~~~~~~v~~~~~~~ 85 (619)
T 3s94_A 8 HAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEE--AIKRTEFNKTESVQNVVVSGLLS 85 (619)
T ss_dssp --CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTT--EEEEEEC-----CEEEECSSCSC
T ss_pred cCceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCC--eEEEEEccCCCceEEEEeCCCCC
Confidence 3689999999999999999863 677889999999999999999999999854 99999998 32 344444 789
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
|.||||||++++|||+|...++|++++++|+.+++|+...+..|++|||||.+|+||||||+..++|+|+.|||+.+++|
T Consensus 86 P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l 165 (619)
T 3s94_A 86 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 165 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999888999999999999999
Q ss_pred eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEe
Q psy6572 691 ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~ 770 (1416)
+...+.+|+|||||+.+++|||+|++.++|++++++|+.+++++... +.+|++|++++++||||||.+++|.++
T Consensus 166 ~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~------~~~P~gi~~~~~~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 166 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILAC 239 (619)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------------CCCEEESSSEEEEECTTTCSEEEE
T ss_pred EeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC------CCCceEEEEeCCEEEEecCCCCEEEEE
Confidence 99899999999999999999999999999999999999999988754 899999999999999999999999999
Q ss_pred cccCCCceEEEEeCCCCCCeeeeeecccCCCCCCCCCCC-CCCCCccceeecCCC-CccccCCCCeeecCCCceecc
Q psy6572 771 DKYTGKNCTSVVKNLVHKPMDLRVYHPYRQTPLKDNPCE-NNGGCQGLCLLKPNG-HRQCACPDNFILESDGKTCRH 845 (1416)
Q Consensus 771 nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q~p~~~npC~-~NggCshlCl~~p~~-~~~C~Cp~g~~L~~d~~tC~~ 845 (1416)
+|.+|+...++. ..+..|++|+|||+.+| |.+.|||. +||+|||||+++|.. +|+|+||.||.|..|+++|..
T Consensus 240 d~~tg~~~~~i~-~~~~~p~~i~v~~~~~q-p~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 240 NKYTGEGLREIH-SDIFSPMDIHAFSQQRQ-PNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp ESSSCCCCEECC-SCCCCCSEEEECCGGGS-CCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred ECCCCcccEEEe-cCCCCCcEEEEEccccC-CCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence 999999887776 67789999999999999 88999999 899999999999864 799999999999999999986
No 14
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-33 Score=331.32 Aligned_cols=283 Identities=25% Similarity=0.494 Sum_probs=221.4
Q ss_pred cccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeecCCCC--cEE-ecC
Q psy6572 452 VNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSCAPG--YAL-LSD 528 (1416)
Q Consensus 452 i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C~~G--y~L-~~d 528 (1416)
|+||. .+++ |+|.|+|++++|+|.|++||.|. .++++|+.+++ . + ..+..+...-++-. ..| +.+ ...
T Consensus 1 i~ec~-~~~~--C~~~C~n~~g~~~C~C~~g~~l~-~d~~~C~~~~~-~--~-~ll~~~~~~I~~i~-~~g~~~~~~~~~ 71 (349)
T 3v64_C 1 VNECA-EEGY--CSQGCTNSEGAFQCWCEAGYELR-PDRRSCKALGP-E--P-VLLFANRIDIRQVL-PHRSEYTLLLNN 71 (349)
T ss_dssp ---------C--CSSEECCC---CCEECCTTEEEC-TTSSCEEESSS-C--C-EEEEECBSCEEEEC-TTSCCEEEEECS
T ss_pred CcccC-CCCC--CcCeeecCCCCeEEECCCCccCC-CCCCccccccc-C--c-eeEeecccceEEEe-CCCCeeEEeecC
Confidence 47887 5566 99999999999999999999998 78999998776 2 1 11222222211111 112 222 222
Q ss_pred CCceE--ecCCCCCeEEEEe--cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC
Q psy6572 529 KHGCK--ATSDVPPNLLFTN--KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ 601 (1416)
Q Consensus 529 g~sC~--a~~~~~~~li~s~--~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~ 601 (1416)
...-. +.+.....|||++ ...|+++.++|.. .++..++..|.||++||.+++|||+|...+ +|.++.++ +.
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~--~I~~~~~dG~~ 149 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS--RIEVANLDGAH 149 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETTSCS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCC--eEEEEcCCCCc
Confidence 22223 3334467888887 5679999999876 455567889999999999999999999854 89999999 55
Q ss_pred CeEEee--cCCCceEEEEccCCcEEEeeCCC-CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEE
Q psy6572 602 PELLFP--ATSPDGLTVDWVGRNLYWCDKGL-DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIG 678 (1416)
Q Consensus 602 ~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~-~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ 678 (1416)
.++++. +..|.+||||+.+++|||+|++. ++|++++++|+.+++|+...+.+|+||||||..++|||+|++.. +|+
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~-~I~ 228 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH-VIE 228 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTT-EEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCC-EEE
Confidence 566654 88999999999999999999998 99999999999999998888999999999999999999998764 999
Q ss_pred EEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEe-CCCCceEEEEeccCCCCcccccceeEEEecC
Q psy6572 679 KAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSD-LNGENIKIIVSRRMDPTINLHHVFALAVFED 755 (1416)
Q Consensus 679 ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~-ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d 755 (1416)
+++++|+.+++++...+.+|.||+|+ +++|||+|+..++|.+++ ++|+.+++|... +.+|++|+++..
T Consensus 229 ~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~-------~~~p~gi~v~~~ 297 (349)
T 3v64_C 229 RANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNK-------LHFPMDIHTLHP 297 (349)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECS-------CSCCCCEEEECG
T ss_pred EEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEEeccC-------CCCCceEEEEcc
Confidence 99999999999998889999999994 789999999999999999 899999888753 789999999864
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-32 Score=330.05 Aligned_cols=290 Identities=26% Similarity=0.491 Sum_probs=217.5
Q ss_pred CCCCc-ccccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeecC-CCCc
Q psy6572 446 DEFSC-FVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSC-APGY 523 (1416)
Q Consensus 446 De~~C-~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C-~~Gy 523 (1416)
|...| +++||. ..+. |+|.|+|++++|+|.|++||.|. .++++|+.+++ . +- .+..+...-++-.= ...+
T Consensus 37 ~~~~C~d~~eC~-~~~~--C~~~C~~~~g~~~C~C~~g~~l~-~d~~~C~~~~~-~--~~-l~~~~~~~I~~i~~~~~~~ 108 (386)
T 3v65_B 37 DGRTCQDVNECA-EEGY--CSQGCTNSEGAFQCWCEAGYELR-PDRRSCKALGP-E--PV-LLFANRIDIRQVLPHRSEY 108 (386)
T ss_dssp ----------------C--CTTEEC-----CCEECCTTEEEC-TTSSCEEECSS-C--CE-EEEECBSCEEEECTTSCCC
T ss_pred CCCccCccceeC-CcCc--ccCcCCCCCCCCeEEECCCceEc-CCCCeECCccc-c--ce-eEeecCccceeeccCCCcE
Confidence 45566 688896 3334 99999999999999999999998 78899998765 2 10 11111111111000 0112
Q ss_pred EE-ecCCCceE--ecCCCCCeEEEEe--cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEE
Q psy6572 524 AL-LSDKHGCK--ATSDVPPNLLFTN--KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRS 596 (1416)
Q Consensus 524 ~L-~~dg~sC~--a~~~~~~~li~s~--~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~ 596 (1416)
.+ ......-. +.+.....|||++ ...|+++.++|.. +++..++..|.||++||.+++|||+|...+ +|.++
T Consensus 109 ~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~--~I~~~ 186 (386)
T 3v65_B 109 TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS--RIEVA 186 (386)
T ss_dssp EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTT--EEEEC
T ss_pred EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCC--eEEEE
Confidence 22 22222222 3333456788876 4679999999876 455667889999999999999999999854 89999
Q ss_pred ecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCC-CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCC
Q psy6572 597 CNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGL-DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWG 672 (1416)
Q Consensus 597 ~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~-~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g 672 (1416)
.++ +..++++. +..|.+||||+..++|||+|++. ++|++++++|+.+++|+...+.+|+||||||..++|||+|++
T Consensus 187 ~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 187 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp BTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred eCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 998 55556655 88999999999999999999998 899999999999999998889999999999999999999987
Q ss_pred CCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEe-CCCCceEEEEeccCCCCcccccceeEE
Q psy6572 673 QNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSD-LNGENIKIIVSRRMDPTINLHHVFALA 751 (1416)
Q Consensus 673 ~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~-ldG~~r~~v~~~~~~p~~~l~~P~~la 751 (1416)
.. +|++++++|+.+++++...+.+|.||+|+ +++|||+|+..++|.+++ ++|..+++|... +..|++|+
T Consensus 267 ~~-~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~-------~~~p~gi~ 336 (386)
T 3v65_B 267 HH-VIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNK-------LHFPMDIH 336 (386)
T ss_dssp TT-EEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECS-------CSCCCCEE
T ss_pred CC-EEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEEEccC-------CCCCceEE
Confidence 64 99999999999999998889999999994 789999999999999999 799999888753 78999999
Q ss_pred EecC
Q psy6572 752 VFED 755 (1416)
Q Consensus 752 v~~d 755 (1416)
++..
T Consensus 337 v~~~ 340 (386)
T 3v65_B 337 TLHP 340 (386)
T ss_dssp EESG
T ss_pred EEch
Confidence 9864
No 16
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=9.3e-32 Score=325.10 Aligned_cols=290 Identities=23% Similarity=0.487 Sum_probs=226.5
Q ss_pred CCCc-ccccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeec-CCCCcE
Q psy6572 447 EFSC-FVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCS-CAPGYA 524 (1416)
Q Consensus 447 e~~C-~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~-C~~Gy~ 524 (1416)
...| +++||.. ++. |++.|+|++++|+|.|++||.+. .++++|+++++.. - .+-.+...-++=. =...|.
T Consensus 34 ~~~C~dideC~~-~~~--C~~~C~n~~g~~~C~C~~g~~~~-~~~~~C~~~~~~~---~-ll~~~~~~I~~i~l~~~~~~ 105 (400)
T 3p5b_L 34 QRRCEDIDECQD-PDT--CSQLCVNLEGGYKCQCEEGFQLD-PHTKACKAVGSIA---Y-LFFTNRHEVRKMTLDRSEYT 105 (400)
T ss_dssp SSCEEECCCCST-TSS--CSSCCBCCSSSCBCCCCTTCCCC-TTTSSCCCSTTSC---E-EEEEETTEEEEECTTSCSCE
T ss_pred CCcccCchhhhc-cCC--CCCccCCCccceeeecccccccc-ccccceeeccccc---e-eEEeccceeEEEccCCccee
Confidence 3456 6888863 334 99999999999999999999998 7888999876522 0 1111211111100 011222
Q ss_pred -EecCCCce--EecCCCCCeEEEEe--cEEEEEEecCCc----c--eEEecccccceeeeeecCCCeEEEeeccCCCccE
Q psy6572 525 -LLSDKHGC--KATSDVPPNLLFTN--KYYIREVTQAGV----M--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSI 593 (1416)
Q Consensus 525 -L~~dg~sC--~a~~~~~~~li~s~--~~~I~~i~l~g~----~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I 593 (1416)
+......- .+.+.....|||++ ...|+++.+++. . +++..++..|.||++||.+++|||+|...+ +|
T Consensus 106 ~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~--~I 183 (400)
T 3p5b_L 106 SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TV 183 (400)
T ss_dssp EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTT--EE
T ss_pred EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCC--eE
Confidence 22222232 33334467889986 467999998872 2 445558889999999999999999999864 89
Q ss_pred EEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCC-CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEe
Q psy6572 594 RRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGL-DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWT 669 (1416)
Q Consensus 594 ~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~-~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWt 669 (1416)
.++.++ ...++++. +..|.+||||+..++|||||++. ++|++++|+|+.+++|+...+.+|+|||||+..++|||+
T Consensus 184 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp EEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence 999999 55556655 88999999999999999999874 799999999999999998899999999999999999999
Q ss_pred eCCCCceEEEEecCCCCCEEEeec--CCCCCeeEEeecCCCeEEEecCCCCeEEEEe-CCCCceEEEEeccCCCCccccc
Q psy6572 670 DWGQNAHIGKAKMDGSNPKVIISK--NLSWPNALTISYETNELFWGDAHEDYIAVSD-LNGENIKIIVSRRMDPTINLHH 746 (1416)
Q Consensus 670 D~g~~~~I~ra~mDGs~r~vlv~~--~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~-ldG~~r~~v~~~~~~p~~~l~~ 746 (1416)
|++.. +|++++++|+.+++++.. .+.+|.||+|+ +++|||+|+.+++|.+++ ++|+.+++|... +.+
T Consensus 264 D~~~~-~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~-------~~~ 333 (400)
T 3p5b_L 264 DSKLH-SISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAEN-------LLS 333 (400)
T ss_dssp ETTTT-EEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECS-------CSC
T ss_pred ECCCC-EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecC-------CCC
Confidence 98754 999999999999999874 48899999995 789999999999999999 799999888653 789
Q ss_pred ceeEEEecCc
Q psy6572 747 VFALAVFEDH 756 (1416)
Q Consensus 747 P~~lav~~d~ 756 (1416)
|++|+++...
T Consensus 334 p~~i~v~~~~ 343 (400)
T 3p5b_L 334 PEDMVLFHNL 343 (400)
T ss_dssp EEEEEEESGG
T ss_pred CceEEEEeec
Confidence 9999998754
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.97 E-value=9.9e-29 Score=280.91 Aligned_cols=249 Identities=31% Similarity=0.587 Sum_probs=215.5
Q ss_pred CeEEEEecEEEEEEecCCcc-e------EEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cC
Q psy6572 540 PNLLFTNKYYIREVTQAGVM-T------IRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--AT 609 (1416)
Q Consensus 540 ~~li~s~~~~I~~i~l~g~~-~------~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~ 609 (1416)
++|+|+++..|+++++++.. . ++.....++.+|++|+.+++|||+|...+ +|+++.++ +..+.++. +.
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEP--SIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTT--EEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCC--EEEEEecCCCCcEEEEECCCC
Confidence 68999999999999999864 1 23334567899999999999999999854 89999998 44555554 68
Q ss_pred CCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCC-CceEEEEecCCCCCE
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ-NAHIGKAKMDGSNPK 688 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~-~~~I~ra~mDGs~r~ 688 (1416)
.|.+|||||.+++|||+|...++|.+++++|..+++++...+..|++|||||..|+|||++++. ..+|+++.++|+.++
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 9999999999999999999999999999999988888877788999999999999999999874 468999999999998
Q ss_pred EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeE
Q psy6572 689 VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIE 768 (1416)
Q Consensus 689 vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~ 768 (1416)
+++...+.+|+||++|+..++|||+|+..++|.+++++|..++.++.. +.+|++|++.+++|||+++.+++|.
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-------~~~P~gi~~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-------LQYPFAVTSYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-------CCSEEEEEEETTEEEEEETTTTEEE
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-------CCCceEEEEeCCEEEEEECCCCeEE
Confidence 888778899999999988899999999999999999999887777652 6889999999999999999999999
Q ss_pred EecccCCCceEEEEeCCCCCCeeeeeecc
Q psy6572 769 RCDKYTGKNCTSVVKNLVHKPMDLRVYHP 797 (1416)
Q Consensus 769 ~~nk~tG~~~~~l~~~~~~~p~~I~v~h~ 797 (1416)
+++..+|+....+.......|++|++.++
T Consensus 233 ~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 233 AMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEeCCCCCceEEEccccccccceeeecCc
Confidence 99988888776665333457999998754
No 18
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.94 E-value=2.5e-25 Score=260.52 Aligned_cols=206 Identities=26% Similarity=0.472 Sum_probs=182.3
Q ss_pred CCeEEEEe--cEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCC
Q psy6572 539 PPNLLFTN--KYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATS 610 (1416)
Q Consensus 539 ~~~li~s~--~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~ 610 (1416)
+..|||++ ...|+++.++|.. .++..++..|.||++||.++.|||+|.... +|.++.++ +..++++. +..
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~--~I~~~~~dG~~~~~l~~~~~~~ 123 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN--RIEVSNLDGSLRKVLFWQELDQ 123 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCSS
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCC--EEEEEECCCCcEEEEEeCCCCC
Confidence 56788886 4579999998874 466678889999999999999999999854 89999999 55566664 899
Q ss_pred CceEEEEccCCcEEEeeCC-CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKV 689 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~v 689 (1416)
|.|||||+.+++|||+|++ ..+|++++++|+.+++|+...+.+|+||||||..++|||+|++.. +|++++++|+++++
T Consensus 124 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~ 202 (318)
T 3sov_A 124 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLN-FIHKSNLDGTNRQA 202 (318)
T ss_dssp EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEE
T ss_pred ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCC-EEEEEcCCCCceEE
Confidence 9999999999999999986 689999999999999999888999999999999999999998754 99999999999999
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEecCc
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVFEDH 756 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~~d~ 756 (1416)
++...+.+|.||+|| +++|||+|+..++|.+++. +|..+++|... +.+|++|++++..
T Consensus 203 ~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~-------~~~P~~i~v~~~~ 261 (318)
T 3sov_A 203 VVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREIHSD-------IFSPMDIHAFSQQ 261 (318)
T ss_dssp EECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECC-------CSSCCCEEEECGG
T ss_pred EecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEeCC-------CCCCcEEEEeccc
Confidence 998789999999997 6899999999999999997 78888877653 7899999998653
No 19
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.92 E-value=6.6e-24 Score=248.27 Aligned_cols=208 Identities=23% Similarity=0.460 Sum_probs=176.4
Q ss_pred CCCCeEEEEe--cEEEEEEecCC----cc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee
Q psy6572 537 DVPPNLLFTN--KYYIREVTQAG----VM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP 607 (1416)
Q Consensus 537 ~~~~~li~s~--~~~I~~i~l~g----~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~ 607 (1416)
.....|||++ ...|+++++++ .. .++..++..|.+|++||.+++|||+|...+ +|.++.++ ...++++.
T Consensus 39 ~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~ 116 (316)
T 1ijq_A 39 VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFR 116 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETTSSSEEEEEE
T ss_pred eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCC--EEEEEeCCCCceEEEEE
Confidence 3456788887 45899999987 33 334456788999999999999999999854 89999998 44555554
Q ss_pred --cCCCceEEEEccCCcEEEeeCCC-CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 608 --ATSPDGLTVDWVGRNLYWCDKGL-DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 608 --l~~p~gLAvD~~~~~LYwtD~~~-~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
+..|.+||||+.+++|||+|++. ++|++++++|+.+++|+...+.+|+|||||+..++|||+|++.. +|++++++|
T Consensus 117 ~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~-~I~~~d~dg 195 (316)
T 1ijq_A 117 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNG 195 (316)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTS
T ss_pred CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC-eEEEEecCC
Confidence 88999999999999999999986 89999999999999998888999999999999999999997754 999999999
Q ss_pred CCCEEEeec--CCCCCeeEEeecCCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEecCc
Q psy6572 685 SNPKVIISK--NLSWPNALTISYETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVFEDH 756 (1416)
Q Consensus 685 s~r~vlv~~--~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~~d~ 756 (1416)
+.+++++.. .+.+|.||+|| +++|||+|+..++|.+++. +|+.+++|..+ +..|++|++++..
T Consensus 196 ~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~-------~~~p~~i~v~~~~ 261 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAEN-------LLSPEDMVLFHNL 261 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEECS-------CSCCCCEEEESGG
T ss_pred CceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEEecC-------CCCceEEEEeccc
Confidence 999998874 58899999997 6999999999999999995 89888887653 7889999998654
No 20
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.90 E-value=2.2e-22 Score=233.43 Aligned_cols=211 Identities=11% Similarity=0.161 Sum_probs=171.9
Q ss_pred ecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeec-cCCCccEEEEecC-CCCeEEeecCCCceEEEEccCCc
Q psy6572 546 NKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDV-TMHGSSIRRSCNN-SQPELLFPATSPDGLTVDWVGRN 622 (1416)
Q Consensus 546 ~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~-~~~~~~I~r~~l~-s~~~~l~~l~~p~gLAvD~~~~~ 622 (1416)
+++.|+++.++|.. +++..... .++.+.+++|||++. ......|+++.++ +..+.|..-.. ++++|.+++
T Consensus 86 n~~~Iy~i~~dg~~~~~l~~~~~----~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~---~~~~~~g~~ 158 (302)
T 3s25_A 86 DRNSLCRIKRNGHGSTVLDPDPC----IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL---FTCNTSDRY 158 (302)
T ss_dssp CSEEEEEEETTSCCCEEEECSCE----EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC---CCSEEETTE
T ss_pred CCCeEEEEeCCCCcceEeecCCc----cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc---eEeeEECCE
Confidence 35789999999988 66655443 345557899999992 2224589999999 66666665211 678999999
Q ss_pred EEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEE
Q psy6572 623 LYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALT 702 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLa 702 (1416)
|||++.+..+|++++++|..+++|+.. +..+++.|..++|||++|+..++|+|++|||+++++|+++.+ | .
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~ 229 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---H 229 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---E
T ss_pred EEEEeCCCceEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---e
Confidence 999999889999999999998888642 445667899999999999877899999999999999987666 2 3
Q ss_pred eecCCCeEEEe-cCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 703 ISYETNELFWG-DAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 703 iD~~~~rLYWt-D~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
|++..++|||+ +.....|+++++||+++++|.... ..+|++++++||||+|.+++|+++ +.+|+..++|
T Consensus 230 ~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~---------~~~i~i~~d~Iy~td~~~~~i~~~-~~dGs~~~~l 299 (302)
T 3s25_A 230 YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE---------FCNINVTSQYVYFTDFVSNKEYCT-STQNPDTIKA 299 (302)
T ss_dssp EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESC---------EEEEEECSSEEEEEETTTCCEEEE-ESSSCCSCEE
T ss_pred EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCc---------cceEEEeCCEEEEEECCCCeEEEE-ECCCCCceEe
Confidence 67779999997 667789999999999999997642 348999999999999999999998 5888887666
Q ss_pred E
Q psy6572 782 V 782 (1416)
Q Consensus 782 ~ 782 (1416)
+
T Consensus 300 ~ 300 (302)
T 3s25_A 300 L 300 (302)
T ss_dssp C
T ss_pred c
Confidence 4
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.87 E-value=8.7e-21 Score=215.34 Aligned_cols=204 Identities=25% Similarity=0.391 Sum_probs=171.1
Q ss_pred CeEEEeeccCCCccEEEEecC-CCC-----eEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCC
Q psy6572 579 NCLYWSDVTMHGSSIRRSCNN-SQP-----ELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKG 650 (1416)
Q Consensus 579 ~~LYwtD~~~~~~~I~r~~l~-s~~-----~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~ 650 (1416)
..|||++.. .|+|+.++ +.. ..+.. ...|++||+|+.+++|||+|...++|.+++++|...++++...
T Consensus 2 ~~l~~~~~~----~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 2 THLLFAQTG----KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEEE----EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT
T ss_pred cEEEEEcCC----eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC
Confidence 358888754 79999988 322 12222 6689999999999999999999999999999998877777777
Q ss_pred CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCC--CCeEEEEeCCCC
Q psy6572 651 LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAH--EDYIAVSDLNGE 728 (1416)
Q Consensus 651 l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~--~~~I~~~~ldG~ 728 (1416)
+..|.+||+||..++|||+|.+.. +|.+++++|+.+++++...+..|++|+||+.+++|||+++. .++|++++++|+
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~-~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLD-RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCccEEEEEecCCeEEEEECCCC-EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 889999999999999999997654 89999999999888887788899999999889999999987 679999999999
Q ss_pred ceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 729 NIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 729 ~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
.++++.... +..|.+|++. +++|||+++..++|.+++.. |..+..++ ..+..|++|++.
T Consensus 157 ~~~~~~~~~------~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~~~~~-~~~~~P~gi~~d 217 (267)
T 1npe_A 157 NRRILAQDN------LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA-QPGRRKVL-EGLQYPFAVTSY 217 (267)
T ss_dssp CCEEEECTT------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT-EEEEEEEE-ECCCSEEEEEEE
T ss_pred CcEEEEECC------CCCCcEEEEcCCCCEEEEEECCCCEEEEEecC-CCceEEEe-cCCCCceEEEEe
Confidence 888876543 7889999996 57999999999999999864 44444454 456788898765
No 22
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.80 E-value=7.8e-20 Score=168.64 Aligned_cols=79 Identities=56% Similarity=1.228 Sum_probs=71.7
Q ss_pred CCccCCCceecCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CceecCCCceeCCCcccCCCCCCCCCCcCc
Q psy6572 1009 SQTCGPDYIRCDTGRCIPKTWQCDGDVDCPNREDEPPSCADPNLYTCDP-TYFKCNNYKCIPGSWHCDYDDDCGDGSDEK 1087 (1416)
Q Consensus 1009 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~C~~~~~~~C~~-~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~ 1087 (1416)
.++|.+++|+|.+|+|||++|+|||+.||.|||||..+|... +|.+ .+|+|.+|+|||..|+|||..||.|||||.
T Consensus 2 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~---~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~ 78 (82)
T 2fyj_A 2 ARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYP---TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA 78 (82)
T ss_dssp CSSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCCCS---SSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCS
T ss_pred CCCCCCCceEeCCCCEEeccccCCCcccCCCccccccccccc---cCCCCCceECCCCCeEcHHHccCCCCcCCCCcccc
Confidence 357999999999999999999999999999999994378653 6865 899999999999999999999999999999
Q ss_pred CCC
Q psy6572 1088 NCT 1090 (1416)
Q Consensus 1088 ~C~ 1090 (1416)
+|.
T Consensus 79 ~C~ 81 (82)
T 2fyj_A 79 GCS 81 (82)
T ss_dssp CCC
T ss_pred CCC
Confidence 885
No 23
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.79 E-value=9.4e-20 Score=168.10 Aligned_cols=76 Identities=49% Similarity=0.990 Sum_probs=71.5
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCC-CCC--CCCCC-CceeecCCceeCCCcccCCCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDE-ADC--STCGN-DTFHCDMGMCIHKALRCDVDPDCPDASDEMHCP 103 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE-~~C--~~C~~-~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~ 103 (1416)
..+|++++|+|.||+|||..|+|||+.||+||||| .+| ++|.+ .+|+|.+|+||+..|+|||..||.|+|||.+|+
T Consensus 2 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 81 (82)
T 2fyj_A 2 ARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 81 (82)
T ss_dssp CSSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCSCCC
T ss_pred CCCCCCCceEeCCCCEEeccccCCCcccCCCccccccccccccCCCCCceECCCCCeEcHHHccCCCCcCCCCccccCCC
Confidence 46899999999999999999999999999999999 899 47964 899999999999999999999999999999885
No 24
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.77 E-value=1e-19 Score=166.56 Aligned_cols=73 Identities=47% Similarity=1.049 Sum_probs=69.7
Q ss_pred ccCCCcEEecCCeEecccccccCCCCCCCCCCCCCC--CCCCCCceeecCCceeCCCcccCCCCCCCCCCCC--CCC
Q psy6572 30 DCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEADC--STCGNDTFHCDMGMCIHKALRCDVDPDCPDASDE--MHC 102 (1416)
Q Consensus 30 ~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~C--~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE--~~C 102 (1416)
+|++++|+|.|++|||..|+|||+.||.|||||.+| .+|++.+|+|.+|+|||..|+|||..||.|+||| .+|
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~~C 78 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 78 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGCGGGC
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccccccccCCceeeECCCCCEEecccccCCCcCCCCCCCcCcccC
Confidence 689999999999999999999999999999999999 3799999999999999999999999999999999 555
No 25
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.76 E-value=8.5e-20 Score=167.12 Aligned_cols=74 Identities=49% Similarity=1.049 Sum_probs=69.2
Q ss_pred CCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCCCCCccCCCCCceecCCCCceecCcccccCCCCCCCCCC
Q psy6572 159 NCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTESTCKANNNVFQCDNNKTCISKSWVCDGTYDCTDRSD 238 (1416)
Q Consensus 159 ~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~~~C~~~~~~F~C~~~~~CI~~~w~CDg~~DC~D~sD 238 (1416)
+|++.+|+|.+|+|||.+|+|||+.||.|| |||.+|+. .+|.+ ++|+| .+++|||.+|+|||..||.||||
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~Dg-----SDE~~C~~-~~C~~--~~f~C-~~g~Ci~~~~~CDg~~DC~dgsD 72 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDG-----SDEASCPV-LTCGP--ASFQC-NSSTCIPQLWACDNDPDCEDGSD 72 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTC-----TTTTTHHH-HHCCT--TEEEC-TTSCEEEGGGTTSSSCCSTTCGG
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCc-----cccccccc-ccCCc--eeeEC-CCCCEEecccccCCCcCCCCCCC
Confidence 588999999999999999999999999999 99999963 58988 99999 78999999999999999999999
Q ss_pred CCC
Q psy6572 239 ENS 241 (1416)
Q Consensus 239 E~~ 241 (1416)
|..
T Consensus 73 E~~ 75 (80)
T 2fcw_B 73 EWP 75 (80)
T ss_dssp GCG
T ss_pred cCc
Confidence 954
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1e-16 Score=195.27 Aligned_cols=232 Identities=11% Similarity=0.113 Sum_probs=177.0
Q ss_pred CCeEEEEec-EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCC--CccEEEEecCCCC---eEEeecCCC
Q psy6572 539 PPNLLFTNK-YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMH--GSSIRRSCNNSQP---ELLFPATSP 611 (1416)
Q Consensus 539 ~~~li~s~~-~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~--~~~I~r~~l~s~~---~~l~~l~~p 611 (1416)
...||+++. +.|+++++++.. +.+...+..|.+|+||+.+++|||+|.... ...|+++..++.. ..+..+..|
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p 228 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNC 228 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSC
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCc
Confidence 456788776 889999998866 556667888999999999999999998532 1235555555222 344458899
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc-CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC----
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN-KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN---- 686 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~-~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~---- 686 (1416)
.+||||+..++|||+|...++|.++++++.....+.. ....+|++||++|...+|||+|+..+ +|.+++++|..
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~-~I~~~~~d~~~~~~~ 307 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH-YILRSDYDWKTKRLT 307 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT-EEEEEEEETTTTEEC
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC-EEEEEeCCccccccc
Confidence 9999999999999999999999999999877644443 44578999999999888999997655 89999999863
Q ss_pred -CEEEeec--------------CCCCCe-eEEeec-------CCCeEEEecCCCCeEEEEeCCCCceEEEEec-------
Q psy6572 687 -PKVIISK--------------NLSWPN-ALTISY-------ETNELFWGDAHEDYIAVSDLNGENIKIIVSR------- 736 (1416)
Q Consensus 687 -r~vlv~~--------------~l~~P~-gLaiD~-------~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~------- 736 (1416)
..++... .+.+|. ||+++. .++.|||+|+.+++|.+++.+|....+.-.+
T Consensus 308 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~ 387 (430)
T 3tc9_A 308 TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGY 387 (430)
T ss_dssp CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSC
T ss_pred ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcc
Confidence 2233321 267899 899963 3689999999999999999888443333221
Q ss_pred -c--CCCCcccccceeEEEe--cCcEEEeecCCCeeEEec
Q psy6572 737 -R--MDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 737 -~--~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~n 771 (1416)
. ......+.+|.+|++. +++||++|+.+++|.++.
T Consensus 388 ~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 388 NDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred cCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEc
Confidence 0 0111247799999997 489999999999999875
No 27
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.75 E-value=1.2e-16 Score=194.84 Aligned_cols=230 Identities=13% Similarity=0.143 Sum_probs=172.9
Q ss_pred CCeEEEEec-EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCC--CccEEEEecCCCC---eEEeecCCC
Q psy6572 539 PPNLLFTNK-YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMH--GSSIRRSCNNSQP---ELLFPATSP 611 (1416)
Q Consensus 539 ~~~li~s~~-~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~--~~~I~r~~l~s~~---~~l~~l~~p 611 (1416)
...|||++. +.|+++++.+.. +.+...+..|.+|++++.++ |||+|.... ...|.++...... .++..+..|
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P 230 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGA 230 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSB
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCC
Confidence 467888876 789999985444 55666788899999999887 999997431 1234555444222 234448999
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecC-CCceEEEE-cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC--
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRFRKVLI-NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP-- 687 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~~~vLi-~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r-- 687 (1416)
.+||||+..++|||++...++|.+++++ |...+.++ .....+|.+||++|..++|||+|++.+ +|.++.+++...
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~-~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH-CIYRVDYNRETGKL 309 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT-EEEEEEBCTTTCCB
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC-EEEEEeCCCCCccc
Confidence 9999999999999999999999999998 65534443 344556778999999889999998755 899999986432
Q ss_pred ---EEEeec--------------CCCCCeeEEe---------ecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccC---
Q psy6572 688 ---KVIISK--------------NLSWPNALTI---------SYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRM--- 738 (1416)
Q Consensus 688 ---~vlv~~--------------~l~~P~gLai---------D~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~--- 738 (1416)
.+++.. .|.+|.||++ | .++.|||+|+.+++|.+++.+|. ..+++....
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~G~-v~t~~G~g~~~~ 387 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPEGR-VTTYAGRGNSRE 387 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTTSE-EEEEECCCTTCS
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCCCC-EEEEEeCCCCCc
Confidence 333332 3678999999 5 58999999999999999999884 334432210
Q ss_pred --------CCCcccccceeEEEe--cCcEEEeecCCCeeEEecc
Q psy6572 739 --------DPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 739 --------~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk 772 (1416)
.....+.+|.+|++. ++.||++|+.+++|.++.+
T Consensus 388 ~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 388 WGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 012247889999998 7899999999999998753
No 28
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=6e-17 Score=197.36 Aligned_cols=205 Identities=15% Similarity=0.190 Sum_probs=160.8
Q ss_pred ccccceeeeeec-CCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEEEeeCCCC----eEEEee
Q psy6572 565 NQTNAVGLDFDW-VDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLD----TIEVAK 637 (1416)
Q Consensus 565 ~l~~~~~l~~D~-~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~----~I~v~~ 637 (1416)
.+.+|.+|++|+ ..+.||++|.. .+|+++.++ ...+++.. +..|.+||||+.++.|||++...+ .|.+..
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~---~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ---HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT---EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC---CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 477899999998 58999999986 389999988 44555555 888999999998888999998533 577778
Q ss_pred cCCCce--EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cCCCCCeeEEeecCCCeEEEec
Q psy6572 638 LDGRFR--KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KNLSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 638 ldG~~~--~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~l~~P~gLaiD~~~~rLYWtD 714 (1416)
.+|... ++|. .+..|.+|||||..|+|||+|++.. +|.++++++.....+.. ....+|++|++|+..++|||+|
T Consensus 212 ~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~-~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 212 RESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAG-QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTT-EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 888765 4443 4788999999998999999998765 89999999876544443 3457899999998777799999
Q ss_pred CCCCeEEEEeCCCCc-----eEEEEeccCCC--------Ccccccce-eEEEec---------CcEEEeecCCCeeEEec
Q psy6572 715 AHEDYIAVSDLNGEN-----IKIIVSRRMDP--------TINLHHVF-ALAVFE---------DHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 715 ~~~~~I~~~~ldG~~-----r~~v~~~~~~p--------~~~l~~P~-~lav~~---------d~LYwtD~~~~~I~~~n 771 (1416)
...++|.+++++|.. ..++....... ...+.+|. +|++.. +.|||+|+.+++|.+++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 999999999999752 23333220000 12477899 898853 69999999999999997
Q ss_pred ccCCC
Q psy6572 772 KYTGK 776 (1416)
Q Consensus 772 k~tG~ 776 (1416)
.+|.
T Consensus 369 -~~G~ 372 (430)
T 3tc9_A 369 -PQGR 372 (430)
T ss_dssp -TTSE
T ss_pred -CCCc
Confidence 3553
No 29
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.71 E-value=2.5e-16 Score=191.92 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=154.9
Q ss_pred ccccceeeeeec--CCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEEEeeCCC----CeEEEe
Q psy6572 565 NQTNAVGLDFDW--VDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLYWCDKGL----DTIEVA 636 (1416)
Q Consensus 565 ~l~~~~~l~~D~--~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~----~~I~v~ 636 (1416)
.+..|.+|++|+ ..+.|||+|.. .+|+++.+. ...+++.. +..|.+||+|+.++ |||+|... ..|.+.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~---~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR---DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT---SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC---CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEE
Confidence 567899999998 48999999987 389999986 55555555 88899999999777 99999853 235555
Q ss_pred ecCCCce-EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC-CCCCEEEee-cCCCCCeeEEeecCCCeEEEe
Q psy6572 637 KLDGRFR-KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD-GSNPKVIIS-KNLSWPNALTISYETNELFWG 713 (1416)
Q Consensus 637 ~ldG~~~-~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD-Gs~r~vlv~-~~l~~P~gLaiD~~~~rLYWt 713 (1416)
...+... ...+ ..+..|.+|||||..|+|||+|++.. +|.+++++ |...+.++. ....+|.+|++++..++|||+
T Consensus 213 ~~~~~~~~~~~~-~~~~~P~giavd~~~G~lyv~d~~~~-~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 213 TRASGFTERLSL-CNARGAKTCAVHPQNGKIYYTRYHHA-MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CGGGTTCCEEEE-EECSSBCCCEECTTTCCEEECBTTCS-EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred ECCCCeeccccc-cccCCCCEEEEeCCCCeEEEEECCCC-EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 5555543 1222 25789999999998999999998754 89999998 554234433 345678899999877789999
Q ss_pred cCCCCeEEEEeCCCCc-----eEEEEeccCCC--------CcccccceeEEE----------ecCcEEEeecCCCeeEEe
Q psy6572 714 DAHEDYIAVSDLNGEN-----IKIIVSRRMDP--------TINLHHVFALAV----------FEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 714 D~~~~~I~~~~ldG~~-----r~~v~~~~~~p--------~~~l~~P~~lav----------~~d~LYwtD~~~~~I~~~ 770 (1416)
|...++|.++++++.. ..+++...... ...+.+|.+|++ .++.||++|+.+++|.++
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 9999999999988532 23333320100 124788999999 357899999999999999
Q ss_pred cccCCC
Q psy6572 771 DKYTGK 776 (1416)
Q Consensus 771 nk~tG~ 776 (1416)
+. +|.
T Consensus 371 ~~-~G~ 375 (433)
T 4hw6_A 371 TP-EGR 375 (433)
T ss_dssp CT-TSE
T ss_pred CC-CCC
Confidence 74 553
No 30
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.69 E-value=3.9e-15 Score=180.25 Aligned_cols=226 Identities=10% Similarity=0.063 Sum_probs=168.5
Q ss_pred CCeEEEEec--EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC-eEE----e-ec
Q psy6572 539 PPNLLFTNK--YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP-ELL----F-PA 608 (1416)
Q Consensus 539 ~~~li~s~~--~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~-~~l----~-~l 608 (1416)
...||+++. +.|+++++++.. ..+......+. |++++.++.|||++.... ..|+++... ... ..+ . ..
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~-~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGT-HTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTT-CEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCC-ceEEEEEcCCCceeEEeeeccchhc
Confidence 345777765 689999998655 44444455566 999999999999998642 278888877 332 233 2 26
Q ss_pred CCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEE----EcCC-CCCcc-eeeecCCcceEEEeeCCCCceEEEEec
Q psy6572 609 TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVL----INKG-LQEPR-GIALNPAYGYMYWTDWGQNAHIGKAKM 682 (1416)
Q Consensus 609 ~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vL----i~~~-l~~P~-gIavDp~~g~LYWtD~g~~~~I~ra~m 682 (1416)
..|.+||||+..++|||++. .++|+++++++....++ .... ...|. +||++|..++|||+|...+ +|.++++
T Consensus 219 ~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~-~I~~~~~ 296 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS-SVYKITP 296 (409)
T ss_dssp SCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT-EEEEECT
T ss_pred CCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC-EEEEEec
Confidence 78999999999999999876 67999999987765555 2211 22367 9999998899999997654 8999999
Q ss_pred CCCCCEEEeecC--------------CCCCeeEEeecCCCeEEEecC-CCCeEEEEe-CCCCceEEEEeccCC-------
Q psy6572 683 DGSNPKVIISKN--------------LSWPNALTISYETNELFWGDA-HEDYIAVSD-LNGENIKIIVSRRMD------- 739 (1416)
Q Consensus 683 DGs~r~vlv~~~--------------l~~P~gLaiD~~~~rLYWtD~-~~~~I~~~~-ldG~~r~~v~~~~~~------- 739 (1416)
+|. ..+++... +.+|+||++|. +++||++|. ..++|.+++ .+|. ..++......
T Consensus 297 ~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~ 373 (409)
T 3hrp_A 297 DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGT 373 (409)
T ss_dssp TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBS
T ss_pred CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCC
Confidence 997 33333332 78899999996 577999999 999999999 4554 4444432100
Q ss_pred -CCcccccceeEEEec-CcEEEeecCCCeeEEec
Q psy6572 740 -PTINLHHVFALAVFE-DHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 740 -p~~~l~~P~~lav~~-d~LYwtD~~~~~I~~~n 771 (1416)
....+.+|.+|++.. +.||++|+.+++|.++.
T Consensus 374 ~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 374 PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 012367899999964 89999999999998874
No 31
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.67 E-value=1e-15 Score=177.46 Aligned_cols=179 Identities=11% Similarity=0.134 Sum_probs=142.6
Q ss_pred CCeEEEEe-----cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCCC
Q psy6572 539 PPNLLFTN-----KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATSP 611 (1416)
Q Consensus 539 ~~~li~s~-----~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~p 611 (1416)
..+|+|+. ...|+++.++|+. +.+..... ++++|.++.|||++.. ...|+++.++ +..++|.. .+
T Consensus 115 g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g--~~~Iy~~~l~g~~~~~l~~--~~ 186 (302)
T 3s25_A 115 GNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPK--NGQLYRYDTASQSEALFYD--CN 186 (302)
T ss_dssp TTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTT--TCCEEEEETTTTEEEEEEC--SC
T ss_pred CCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCC--CceEEEEECCCCCEEEEeC--CC
Confidence 45788876 5689999999987 54444321 6789999999999984 3589999999 55555543 34
Q ss_pred ceEEEEccCCcEEEeeCCC-CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 612 DGLTVDWVGRNLYWCDKGL-DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~-~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
..+++.|.++.|||+++.. .+|++++|+|+.+++|+...+ ..++|..++|||++.+....|+++++||+.+++|
T Consensus 187 ~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~-----~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l 261 (302)
T 3s25_A 187 CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI-----EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKEL 261 (302)
T ss_dssp EEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE-----EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEE
T ss_pred ccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc-----ceEEECCCEEEEEECCCCcEEEEEECCCCccEEe
Confidence 4567778999999999875 599999999999999876555 3488889999998655557999999999999999
Q ss_pred eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEe
Q psy6572 691 ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVS 735 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~ 735 (1416)
.... ..+| .+.+++|||+|+..+.|+++++||+++.+|+.
T Consensus 262 ~~~~---~~~i--~i~~d~Iy~td~~~~~i~~~~~dGs~~~~l~~ 301 (302)
T 3s25_A 262 AKGE---FCNI--NVTSQYVYFTDFVSNKEYCTSTQNPDTIKALQ 301 (302)
T ss_dssp EESC---EEEE--EECSSEEEEEETTTCCEEEEESSSCCSCEECC
T ss_pred eCCc---cceE--EEeCCEEEEEECCCCeEEEEECCCCCceEecC
Confidence 8753 2344 44799999999999999999999999887753
No 32
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.1e-14 Score=177.96 Aligned_cols=231 Identities=13% Similarity=0.101 Sum_probs=172.0
Q ss_pred CeEEEEec--EEEEEEecCCcc-eEEec----ccccceeeee-------ecCCCeEEEeeccCC----CccEEEEecCC-
Q psy6572 540 PNLLFTNK--YYIREVTQAGVM-TIRIH----NQTNAVGLDF-------DWVDNCLYWSDVTMH----GSSIRRSCNNS- 600 (1416)
Q Consensus 540 ~~li~s~~--~~I~~i~l~g~~-~~~~~----~l~~~~~l~~-------D~~~~~LYwtD~~~~----~~~I~r~~l~s- 600 (1416)
..||++.+ +.|++|++.+.. +.++. .+..|.+|+| +...++||+++.... ...|+++....
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 45666654 579999988866 33332 2346899999 998889999998742 12466664332
Q ss_pred -CC------eEEeecCCCceEEEEccCCcEEEeeCCCCeEEEeecC--------CCc-----------eEEEE-cCCCCC
Q psy6572 601 -QP------ELLFPATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD--------GRF-----------RKVLI-NKGLQE 653 (1416)
Q Consensus 601 -~~------~~l~~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld--------G~~-----------~~vLi-~~~l~~ 653 (1416)
.. .++..+..|.+||||+..++||+++...++|++++++ |.. .+.|+ .....+
T Consensus 232 G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~ 311 (496)
T 3kya_A 232 GTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSW 311 (496)
T ss_dssp SCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSC
T ss_pred CceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCC
Confidence 22 2444488999999999999999999999999999997 332 22333 344578
Q ss_pred cceeeecCCcceEEEeeCCCCceEEEEecCCCCC-----EEEeec--------------CCCCCe-eEEeec------CC
Q psy6572 654 PRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP-----KVIISK--------------NLSWPN-ALTISY------ET 707 (1416)
Q Consensus 654 P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r-----~vlv~~--------------~l~~P~-gLaiD~------~~ 707 (1416)
|++||++|...+||++|++.+ +|.++.++|... .+++.. .|.+|. ++++|. .+
T Consensus 312 p~~ia~~p~G~~lYvaD~~~h-~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 312 EFQIFIHPTGKYAYFGVINNH-YFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp CEEEEECTTSSEEEEEETTTT-EEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred ceEEEEcCCCCEEEEEeCCCC-EEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCC
Confidence 999999999888999998765 999999998763 334332 367899 888873 57
Q ss_pred CeEEEecCCCCeEEEEeCCCCceEEEEeccC-----------------CCCcccccceeEEEec--CcEEEeecCCCeeE
Q psy6572 708 NELFWGDAHEDYIAVSDLNGENIKIIVSRRM-----------------DPTINLHHVFALAVFE--DHLFWTDWEMKSIE 768 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~-----------------~p~~~l~~P~~lav~~--d~LYwtD~~~~~I~ 768 (1416)
+.||++|+.+++|.+++.+|. ..+++-... .....|.+|.+|++.. +.||++|..+++|.
T Consensus 391 g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIr 469 (496)
T 3kya_A 391 YDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIR 469 (496)
T ss_dssp EEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 899999999999999999984 444443210 1122578999999974 79999999999999
Q ss_pred Eecc
Q psy6572 769 RCDK 772 (1416)
Q Consensus 769 ~~nk 772 (1416)
++..
T Consensus 470 ki~~ 473 (496)
T 3kya_A 470 TISM 473 (496)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8864
No 33
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=9e-15 Score=177.01 Aligned_cols=206 Identities=13% Similarity=0.131 Sum_probs=158.2
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEEEeeCCCC-eEEEeecCCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLD-TIEVAKLDGR 641 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~-~I~v~~ldG~ 641 (1416)
.+..|.+|++|. .++|||+|... .+|+++.++ ....++.. ...|. |++++.++.|||++...+ +|.+++.++.
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~--~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDD--PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTT--TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred ccCCceEEEEeC-CCCEEEEecCC--CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 467899999995 66799999875 489999988 45555555 66677 999999999999998665 9999998876
Q ss_pred ceEEEE----cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE----eecCC-CCCe-eEEeecCCCeEE
Q psy6572 642 FRKVLI----NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI----ISKNL-SWPN-ALTISYETNELF 711 (1416)
Q Consensus 642 ~~~vLi----~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl----v~~~l-~~P~-gLaiD~~~~rLY 711 (1416)
.....+ ...+..|++|||+|..|+|||++. ..+|.+.++++....++ ..... ..|. +|++|+..++||
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 643333 336788999999999999999885 34899999987765544 22222 2356 999998889999
Q ss_pred EecCCCCeEEEEeCCCCceEEEEeccCCC--------CcccccceeEEEe-cCcEEEeec-CCCeeEEecccCCCc
Q psy6572 712 WGDAHEDYIAVSDLNGENIKIIVSRRMDP--------TINLHHVFALAVF-EDHLFWTDW-EMKSIERCDKYTGKN 777 (1416)
Q Consensus 712 WtD~~~~~I~~~~ldG~~r~~v~~~~~~p--------~~~l~~P~~lav~-~d~LYwtD~-~~~~I~~~nk~tG~~ 777 (1416)
|+|...++|.+++++|. ..+++.....+ ...+.+|.+|++. ++.||++|+ .+++|.+++..+|..
T Consensus 283 v~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 99999999999999998 33333221000 0136789999996 568999999 999999998666653
No 34
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.7e-14 Score=176.13 Aligned_cols=212 Identities=13% Similarity=0.173 Sum_probs=158.3
Q ss_pred cccccceeeeeec-CCCeEEEeeccCCCccEEEEecC-CCCeEEee-----cCCCceEEE-------EccCCcEEEeeCC
Q psy6572 564 HNQTNAVGLDFDW-VDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-----ATSPDGLTV-------DWVGRNLYWCDKG 629 (1416)
Q Consensus 564 ~~l~~~~~l~~D~-~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-----l~~p~gLAv-------D~~~~~LYwtD~~ 629 (1416)
..+..|.+|+||+ ..++||+++... ..|+++++. ...++|.. +..|.+||+ |..++.||+++..
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~--~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGH--KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETE--EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred cccCCCCEEEEccCCCCEEEEEECCC--CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 3467899999999 588999999874 479999988 45666655 346999999 9888889999987
Q ss_pred C------CeEEEee--cCCCce-----EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC-------CCCC--
Q psy6572 630 L------DTIEVAK--LDGRFR-----KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD-------GSNP-- 687 (1416)
Q Consensus 630 ~------~~I~v~~--ldG~~~-----~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD-------Gs~r-- 687 (1416)
. ..|.++. .+|.+. .++. .+.+|.+|+|||..++||+++++.. +|++++++ +...
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g-~V~r~d~~~~~~~~~tg~~~t 290 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKG-QVFRLDLVDYFKTIKNGGSWD 290 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTT-EEEEECHHHHHHHHHTTCCCC
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCC-EEEEEecccccccccCceeec
Confidence 5 2466664 334553 3333 5779999999999999999998764 89999997 3322
Q ss_pred ----------EEEee-cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCce-----EEEEeccCCC--------Ccc
Q psy6572 688 ----------KVIIS-KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENI-----KIIVSRRMDP--------TIN 743 (1416)
Q Consensus 688 ----------~vlv~-~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r-----~~v~~~~~~p--------~~~ 743 (1416)
..++. ....||++|++++..+.||++|+..++|++++++|... .+++...... ...
T Consensus 291 p~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~ 370 (496)
T 3kya_A 291 PIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEAR 370 (496)
T ss_dssp CBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCB
T ss_pred ccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccc
Confidence 23333 34578999999987777999999999999999988652 3343320111 235
Q ss_pred cccce-eEEEe--------cCcEEEeecCCCeeEEecccCCCceEEEE
Q psy6572 744 LHHVF-ALAVF--------EDHLFWTDWEMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 744 l~~P~-~lav~--------~d~LYwtD~~~~~I~~~nk~tG~~~~~l~ 782 (1416)
|.+|. ++++. ++.||++|+.+++|.+++ .+|. ..++.
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 78999 78884 578999999999999998 4563 44443
No 35
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=3.4e-14 Score=166.22 Aligned_cols=224 Identities=17% Similarity=0.135 Sum_probs=162.0
Q ss_pred ccccceeeeeecCCCeEEEeeccCCC----------------------ccEEEEecC-CCCeEEee---cCCCceEEEEc
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHG----------------------SSIRRSCNN-SQPELLFP---ATSPDGLTVDW 618 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~----------------------~~I~r~~l~-s~~~~l~~---l~~p~gLAvD~ 618 (1416)
.+..+.+|++|+. ++||+++..... ..|+++... ........ +..|.+||||+
T Consensus 22 ~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 4567889999875 678898876420 247777765 33222222 67899999996
Q ss_pred cCCcEEEeeCCCCeEEEeecCCC--ceEEEE--------cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE
Q psy6572 619 VGRNLYWCDKGLDTIEVAKLDGR--FRKVLI--------NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 619 ~~~~LYwtD~~~~~I~v~~ldG~--~~~vLi--------~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~ 688 (1416)
.++||+++...++|.+.+++|. ...++. ...+..|.+||++|..|.||++|.....+|.+.+.+|....
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE
Confidence 5569999999999999999998 444443 24567899999999889999999523458999999998776
Q ss_pred EEeec---------CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEEEeccCCCCcccccceeEEEe-----
Q psy6572 689 VIISK---------NLSWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKIIVSRRMDPTINLHHVFALAVF----- 753 (1416)
Q Consensus 689 vlv~~---------~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v~~~~~~p~~~l~~P~~lav~----- 753 (1416)
.+... .+.+|.+|+||+..++||++|...++|.+++++ |+..+.+.... .-..|+++++.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-----FGRNVFAISYIPGFLF 254 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-----TTTCEEEEEEETTEEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-----cCCCcceeeecCCEEE
Confidence 66532 356799999998779999999999999999998 87766664321 12344444443
Q ss_pred --cCcEEEeecCCCeeEEecccCCCceEEEE--eCCCCCCeeeeee
Q psy6572 754 --EDHLFWTDWEMKSIERCDKYTGKNCTSVV--KNLVHKPMDLRVY 795 (1416)
Q Consensus 754 --~d~LYwtD~~~~~I~~~nk~tG~~~~~l~--~~~~~~p~~I~v~ 795 (1416)
.+.+|+++....+|+.++..+|+...++. ...+..|.+|++.
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 55677777777788888877776555542 1345567777663
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=3.4e-14 Score=159.75 Aligned_cols=219 Identities=17% Similarity=0.254 Sum_probs=161.0
Q ss_pred eEEE-E--ecEEEEEEecCCcc-eE-EecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee--cCCCc
Q psy6572 541 NLLF-T--NKYYIREVTQAGVM-TI-RIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP--ATSPD 612 (1416)
Q Consensus 541 ~li~-s--~~~~I~~i~l~g~~-~~-~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~--l~~p~ 612 (1416)
.|++ + ....|++++..+.. .. ....+..|.+|+++.. ++||+++. . ..|+++..++. ...+.. +..|.
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~--~~i~~~d~~~~~~~~~~~~~~~~p~ 111 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-N--NRVVTLAAGSNNQTVLPFDGLNYPE 111 (270)
T ss_dssp CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-T--TEEEEECTTCSCCEECCCCSCSSEE
T ss_pred CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-C--CEEEEEeCCCceEeeeecCCcCCCc
Confidence 3555 4 34568877765544 22 2334567899999985 45999987 3 37998888743 333322 57899
Q ss_pred eEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee
Q psy6572 613 GLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS 692 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~ 692 (1416)
+|++|+ .++||+++...++|.+.+..+.....+....+..|.+|++++. |.||+++.+. ..|.+.++++.....+..
T Consensus 112 ~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~-~~i~~~~~~~~~~~~~~~ 188 (270)
T 1rwi_B 112 GLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS-GNVYVTDTDN-NRVVKLEAESNNQVVLPF 188 (270)
T ss_dssp EEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTT-CCEEEEEGGG-TEEEEECTTTCCEEECCC
T ss_pred ceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCC-CCEEEEECCC-CEEEEEecCCCceEeecc
Confidence 999997 5679999998899999965544443333455678999999985 6799999654 489999998876555545
Q ss_pred cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEec
Q psy6572 693 KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 693 ~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~n 771 (1416)
..+..|.+|++|. .++||+++...+.|.+++.+|.....+.... +..|.+|++. .+.||++++..++|..++
T Consensus 189 ~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 189 TDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG------LNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp SSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCS------CSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred cCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCC------CCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 5678899999996 5699999999999999999887665433222 6789999995 578999999999998876
Q ss_pred cc
Q psy6572 772 KY 773 (1416)
Q Consensus 772 k~ 773 (1416)
+.
T Consensus 262 ~~ 263 (270)
T 1rwi_B 262 SL 263 (270)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=4.7e-14 Score=158.59 Aligned_cols=213 Identities=17% Similarity=0.258 Sum_probs=154.2
Q ss_pred cceeeeeecCCCeEEE-eeccCCCccEEEEecCCC-CeEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 568 NAVGLDFDWVDNCLYW-SDVTMHGSSIRRSCNNSQ-PELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYw-tD~~~~~~~I~r~~l~s~-~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
.|.+|+++..+ +||+ ++... ..|+++...+. ...+.. +..|.+|++|+. ++||+++. .++|.+.+++|...
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMY--GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSS--CEEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCC-CEEEEccCCC--CcEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCCCceE
Confidence 89999999754 5999 87664 37888877632 222222 578999999974 56999998 78999999999876
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVS 723 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~ 723 (1416)
..+....+..|.+|++++. |+||+++.+. ..|.+.+........+....+..|++|++|. .++||+++...+.|.++
T Consensus 100 ~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQ-GAVYVADRGN-NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp EECCCCSCSSEEEEEECTT-CCEEEEEGGG-TEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEE
T ss_pred eeeecCCcCCCcceEECCC-CCEEEEECCC-CEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEEE
Confidence 6555456788999999984 7899999654 3788885433333333334567899999996 67899999988999999
Q ss_pred eCCCCceEEEEeccCCCCcccccceeEEEec-CcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 724 DLNGENIKIIVSRRMDPTINLHHVFALAVFE-DHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 724 ~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~-d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
++++.....+.... +..|.+|++.. ++||++++..+.|.+++..+ .....+....+..|.+|++.
T Consensus 177 ~~~~~~~~~~~~~~------~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~ 242 (270)
T 1rwi_B 177 EAESNNQVVLPFTD------ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVD 242 (270)
T ss_dssp CTTTCCEEECCCSS------CCSEEEEEECTTCCEEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEEEC
T ss_pred ecCCCceEeecccC------CCCceEEEECCCCCEEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEEEC
Confidence 99887655433322 57899999964 59999999999999987643 33222221234566776653
No 38
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=9.2e-14 Score=162.57 Aligned_cols=216 Identities=15% Similarity=0.113 Sum_probs=154.9
Q ss_pred EEEEEecC-Ccce-EE-ecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC---CeEEe--------e--cCCCc
Q psy6572 549 YIREVTQA-GVMT-IR-IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ---PELLF--------P--ATSPD 612 (1416)
Q Consensus 549 ~I~~i~l~-g~~~-~~-~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~---~~~l~--------~--l~~p~ 612 (1416)
.|+.++.. |... .. ...+..|.+|++|+.+ .||++|...+ +|+++.+++. ...+. . +..|.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g-~l~v~d~~~~--~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG-NYWVTDVALH--QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTS-CEEEEETTTT--EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCC-CEEEEECCCC--EEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 36666654 3321 11 1345689999999754 5999999854 8999988743 33332 1 55799
Q ss_pred eEEEEccCCcEEEeeC-CCCeEEEeecCCCceEEEEc---------CCCCCcceeeecCCcceEEEeeCCCCceEEEEec
Q psy6572 613 GLTVDWVGRNLYWCDK-GLDTIEVAKLDGRFRKVLIN---------KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKM 682 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~-~~~~I~v~~ldG~~~~vLi~---------~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~m 682 (1416)
+||||+..++||++|. ..++|.+.+.+|....++.. ..+..|.+||+||..|+||++|++.. +|.+.++
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~-~I~~~~~ 225 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG-RIQCFKT 225 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT-EEEEEET
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC-EEEEEEC
Confidence 9999998999999996 78999999999988776642 24567999999999999999998765 8999999
Q ss_pred C-CCCCEEEeecC-CCCCeeEEeec-----CCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEe-
Q psy6572 683 D-GSNPKVIISKN-LSWPNALTISY-----ETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVF- 753 (1416)
Q Consensus 683 D-Gs~r~vlv~~~-l~~P~gLaiD~-----~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~- 753 (1416)
+ |.....+.... ...|.+|++.+ .++++|+++....+|..+++ +|....++... ...+..|.+|++.
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~----~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV----RKHFDMPHDIVASE 301 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS----SSCCSSEEEEEECT
T ss_pred CCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC----CCccCCeeEEEECC
Confidence 8 76655554322 23455444443 24567777777779999995 45444433211 1137889999995
Q ss_pred cCcEEEeecCCCeeEEecc
Q psy6572 754 EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 754 ~d~LYwtD~~~~~I~~~nk 772 (1416)
.+.||++++.+++|.+++.
T Consensus 302 dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp TSEEEEEESSSCCEEEEEE
T ss_pred CCCEEEEECCCCEEEEEeC
Confidence 4599999999999988764
No 39
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=1.1e-12 Score=149.15 Aligned_cols=241 Identities=14% Similarity=0.195 Sum_probs=172.2
Q ss_pred CeEEEEe--cEEEEEEecCCcc-eEEe-cccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee---cCCCc
Q psy6572 540 PNLLFTN--KYYIREVTQAGVM-TIRI-HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP---ATSPD 612 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~-~~~~-~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~---l~~p~ 612 (1416)
..|+++. ...|.+++..+.. .+.+ ..+..+.+|++|. .+.||+++... ..|+++..++....+.. ...|.
T Consensus 31 g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~v~~~d~~g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGA--NKIGKLSKKGGFTEYPLPQPDSGPY 107 (300)
T ss_dssp SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTT--TEEEEECTTSCEEEEECSSTTCCEE
T ss_pred CCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEecCC--CeEEEECCCCCeEEecCCCCCCCCc
Confidence 3455555 3578888877443 2222 2346789999985 56799998764 37888877733332221 46799
Q ss_pred eEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee
Q psy6572 613 GLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS 692 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~ 692 (1416)
+|++|. .++||+++...+.|.+.+++|......+......|.+|++|+. |.||+++.+. ..|.+.+.+|......+.
T Consensus 108 ~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~-~~i~~~~~~g~~~~~~~~ 184 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSD-NALWFTENQN-NSIGRITNTGKLEEYPLP 184 (300)
T ss_dssp EEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT-SSEEEEETTT-TEEEEECTTCCEEEEECS
T ss_pred cceECC-CCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCC-CCEEEEecCC-CeEEEECCCCcEEEeeCC
Confidence 999995 6789999998889999999976665444446778999999986 6699999654 479999887765543333
Q ss_pred cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEec
Q psy6572 693 KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 693 ~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~n 771 (1416)
..+..|.+|++|. .++||+++...+.|.+++.+|......+.. ....|.+|++. .+.||+++...+.|.+++
T Consensus 185 ~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 185 TNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEISEYDIPT------PNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp STTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSS------TTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcEEEEECCC------CCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 4577899999996 689999999889999999977655433322 26789999996 578999999999999998
Q ss_pred ccCCCceEEEEeCCCCCCeeeee
Q psy6572 772 KYTGKNCTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 772 k~tG~~~~~l~~~~~~~p~~I~v 794 (1416)
. +|......+......|.+|++
T Consensus 258 ~-~g~~~~~~~~~~~~~~~~i~~ 279 (300)
T 2qc5_A 258 N-DNTIQEYQLQTENAEPHGITF 279 (300)
T ss_dssp T-TSCEEEEECCSTTCCCCCEEE
T ss_pred C-CCcEEEEECCccCCccceeEe
Confidence 6 554332222223345555554
No 40
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.51 E-value=2.2e-16 Score=168.91 Aligned_cols=131 Identities=16% Similarity=0.220 Sum_probs=108.9
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCceee--cCCceeCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceecCCCCce
Q psy6572 49 TCNNINDCGDGSDEADCSTCGNDTFHC--DMGMCIHKALRCDVDPDCPDASDEMHCPMTNCTEKYPLMTNPIHCNFTSAC 126 (1416)
Q Consensus 49 ~Cdg~~dC~d~sDE~~C~~C~~~~f~C--~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~C~~~~~~~~~~f~C~~~~~C 126 (1416)
+.-+..+|.|+|||.+|.+|++.+|+| .+|+|||..|+|||..||.|+|||.+|+..+|.+.+ |+|.
T Consensus 36 ~~~~~~~c~d~sDE~~C~~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~~~~C~~~~------F~c~----- 104 (215)
T 2gtl_O 36 RIRKAGSLRHRVEELEDPSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTLPTKAGDK------FIGD----- 104 (215)
T ss_dssp HHHHHHHHHHHHHHHSCCSSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHCCCCSSCTTCE------EEEE-----
T ss_pred hhcccccCCcchhhccCCCCCCcceeeCCCCCcCccccccCCCCCcCCCcccccCCCCCCcCCCc------eeee-----
Confidence 344556899999999999999999999 799999999999999999999999999999998877 8872
Q ss_pred ecCCcccCCCCCCCCCCCccccccccCCCCCcCCC--CCCcccCCC---ceec-----------CceeecCCCCCCCCCC
Q psy6572 127 IEESYICDGQNDCFDMSDEQNCDQIKDVSPKMNCS--GDKFLCRNG---NCIL-----------SRWRCDGDNDCNDGND 190 (1416)
Q Consensus 127 I~~~~~CDg~~DC~D~sDE~~C~~~~~~~~~~~C~--~~~f~C~~g---~CI~-----------~~~~CDg~~DC~Dg~d 190 (1416)
+ ++++ |.+.+|+..|.. .|. ..+|.|.++ .||. .+|.|||..| +|
T Consensus 105 -~-----~~~~-C~~~~~~~~c~~--------~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd--~g-- 165 (215)
T 2gtl_O 105 -V-----CFDH-CTKRRPEHMTLA--------FESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS--FA-- 165 (215)
T ss_dssp -E-----EEES-SCSSCCSEEEEE--------EEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE--TT--
T ss_pred -E-----CCCc-ccCCCCCCceee--------eeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec--CC--
Confidence 2 3443 888999987752 343 467999877 4888 9999999999 68
Q ss_pred CCCCCCCCCCCCCccCCCCCceecC
Q psy6572 191 GLSSDEMNCDTESTCKANNNVFQCD 215 (1416)
Q Consensus 191 ~~~sDE~~C~~~~~C~~~~~~F~C~ 215 (1416)
|+|..|.+ +.|.. .+|+|.
T Consensus 166 ---s~el~~~p-p~~~~--l~f~C~ 184 (215)
T 2gtl_O 166 ---DHRLTIHP-PEEDG--LGLVGE 184 (215)
T ss_dssp ---TTEEEECC-SSTTT--EEEEEE
T ss_pred ---cceeeecC-CCCCC--ceeEEE
Confidence 88999974 45766 789983
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.51 E-value=1.3e-12 Score=148.73 Aligned_cols=218 Identities=14% Similarity=0.189 Sum_probs=162.0
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEee-------cCCCceEEEEccCCcEEEeeCC-CCeEEE
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLFP-------ATSPDGLTVDWVGRNLYWCDKG-LDTIEV 635 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~~-------l~~p~gLAvD~~~~~LYwtD~~-~~~I~v 635 (1416)
.+..|.+|+++.. +.||+++... ..|+++.+++.. ..+.. +..|.+||++...++||+++.. .++|.+
T Consensus 28 ~~~~p~~v~~~~~-g~l~v~~~~~--~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVNAQ-NDIIVADTNN--HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp CBSCEEEEEECTT-CCEEEEEGGG--TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred ccCCCceEEECCC-CCEEEEECCC--CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4567899999875 5799998774 378888777332 22211 3579999998789999999975 789999
Q ss_pred eecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cCCCCCeeEEeecCCCeEEEec
Q psy6572 636 AKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KNLSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 636 ~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~l~~P~gLaiD~~~~rLYWtD 714 (1416)
.+.+|...+.+....+..|++|++++. |.||+++.+. .+|.+.+.+|.....+.. ..+..|++|++|+ +++||+++
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~ 181 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDNK-GRIIVVECKV-MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISD 181 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECTT-SCEEEEETTT-TEEEEECTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEE
T ss_pred ECCCCcEEEEecCccCCCceEEEEeCC-CCEEEEECCC-CEEEEEcCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEE
Confidence 999888776665556778999999996 6899999654 489999988865555443 3577899999996 68899999
Q ss_pred CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCC-eeEEecccCCCceEEEEeC-CCCCCee
Q psy6572 715 AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMK-SIERCDKYTGKNCTSVVKN-LVHKPMD 791 (1416)
Q Consensus 715 ~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~-~I~~~nk~tG~~~~~l~~~-~~~~p~~ 791 (1416)
...+.|.+++.+|.....+.... .+..|.+|++. .++||++++..+ .|.+.+. +|.....+... ....|.+
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g-----~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEG-----ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTT-----TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred CCCCEEEEEcCCCCEEEEEccCC-----ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 98999999999887655553321 25789999995 579999999886 8888874 45544444311 1223555
Q ss_pred eee
Q psy6572 792 LRV 794 (1416)
Q Consensus 792 I~v 794 (1416)
|++
T Consensus 256 i~~ 258 (286)
T 1q7f_A 256 VAL 258 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.49 E-value=6.2e-12 Score=142.70 Aligned_cols=241 Identities=16% Similarity=0.211 Sum_probs=170.2
Q ss_pred CeEEEEe--cEEEEEEecCCcce-EEe-cccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEe---ecCCCc
Q psy6572 540 PNLLFTN--KYYIREVTQAGVMT-IRI-HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLF---PATSPD 612 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~~-~~~-~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~---~l~~p~ 612 (1416)
..|+++. ...|.++++.+... +.. .....+.+|++|. .+.||+++... ..|+++..++..+.+. ....|.
T Consensus 26 g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~ 102 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTENAA--NKIGRITKKGIIKEYTLPNPDSAPY 102 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTT--TEEEEECTTSCEEEEECSSTTCCEE
T ss_pred CCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCCCC--CeEEEECCCCcEEEEeCCCcCCCce
Confidence 3455555 35788888874432 222 2356788999986 56789987753 3788888764333332 156799
Q ss_pred eEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee
Q psy6572 613 GLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS 692 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~ 692 (1416)
+|++|+ .++||+++...+.|.+.+++|....+........|.+|++|+. |.||+++... ..|.+.+.+|......+.
T Consensus 103 ~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~-~~i~~~~~~g~~~~~~~~ 179 (299)
T 2z2n_A 103 GITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSD-NALWFTENQN-NAIGRITESGDITEFKIP 179 (299)
T ss_dssp EEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SCEEEEETTT-TEEEEECTTCCEEEEECS
T ss_pred eeEECC-CCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCC-CCEEEEeCCC-CEEEEEcCCCcEEEeeCC
Confidence 999996 6789999988889999999777665555455678999999976 7999998654 479999886554433344
Q ss_pred cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEec
Q psy6572 693 KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 693 ~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~n 771 (1416)
..+..|.+|++|. .++||+++...+.|.+++.+|.... +.... ....|.+|++. .+.||++++..+.|.+++
T Consensus 180 ~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 180 TPASGPVGITKGN-DDALWFVEIIGNKIGRITTSGEITE-FKIPT-----PNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp STTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEE-EECSS-----TTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred CCCCcceeEEECC-CCCEEEEccCCceEEEECCCCcEEE-EECCC-----CCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 4577899999996 5889999988899999999665333 22211 25689999996 578999999899999998
Q ss_pred ccCCCceEEEEeCCCCCCeeeee
Q psy6572 772 KYTGKNCTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 772 k~tG~~~~~l~~~~~~~p~~I~v 794 (1416)
. +|......+......|.+|.+
T Consensus 253 ~-~g~~~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 253 S-NNIIEEYPIQIKSAEPHGICF 274 (299)
T ss_dssp T-TTEEEEEECSSSSCCEEEEEE
T ss_pred C-CCceEEEeCCCCCCccceEEe
Confidence 6 553222222223345666665
No 43
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.49 E-value=1.9e-12 Score=150.74 Aligned_cols=195 Identities=13% Similarity=0.152 Sum_probs=148.1
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cCCCceEEEEccCCcEEEeeCCC---------
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------ATSPDGLTVDWVGRNLYWCDKGL--------- 630 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~~p~gLAvD~~~~~LYwtD~~~--------- 630 (1416)
..|.+|+++...++||+++... .|+++.+. ...+++.. +..|.+|++|+..++||+++...
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~---~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYY---HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTT---EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCCcEEEEECCC---CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 4689999998778999998763 48888776 33444432 56799999998577999999752
Q ss_pred --------CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC---CCEEEeecCCCCCe
Q psy6572 631 --------DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS---NPKVIISKNLSWPN 699 (1416)
Q Consensus 631 --------~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs---~r~vlv~~~l~~P~ 699 (1416)
++|++.+.++...+++. ..+..|.|||+++..++||++|.+. .+|.+.+++|. ..+++.. +..|.
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~-~~I~~~~~~~~~~~~~~~~~~--~~gP~ 232 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLS-HQIVKYWLEGPKKGTAEVLVK--IPNPG 232 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGG-TEEEEEESSSTTTTCEEEEEE--CSSEE
T ss_pred ehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCC-CeEEEEECCCCcCCccceEEe--CCCCC
Confidence 57888888755544444 4578899999999988999999764 48999999974 2334443 22399
Q ss_pred eEEeecCCCeEEEecCC----------CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEE
Q psy6572 700 ALTISYETNELFWGDAH----------EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIER 769 (1416)
Q Consensus 700 gLaiD~~~~rLYWtD~~----------~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~ 769 (1416)
||++|. +++||+++.. .+.|.+++.+|...+.+.... +..+..|.+++..+++||+++...+.|.+
T Consensus 233 gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~---g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 233 NIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP---PFAGEHFEQIQEHDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp EEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT---TTTTSCCCEEEEETTEEEEECSSCSEEEE
T ss_pred CeEECC-CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC---CCccccceEEEEeCCEEEEeecCCCceEE
Confidence 999996 6789999876 467999999988666654422 12256788888889999999999999998
Q ss_pred ecc
Q psy6572 770 CDK 772 (1416)
Q Consensus 770 ~nk 772 (1416)
++.
T Consensus 309 ~~~ 311 (322)
T 2fp8_A 309 LVY 311 (322)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=3.6e-12 Score=144.72 Aligned_cols=217 Identities=15% Similarity=0.213 Sum_probs=159.3
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEe-e--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLF-P--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~-~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
....|.+|++|.. ++||+++... ..|.++..+.....+. . +..|.+|++| ..++||+++...++|.+.+.+|.
T Consensus 18 ~~~~p~~i~~d~~-g~l~v~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~g~ 93 (300)
T 2qc5_A 18 PDSGPYGITSSED-GKVWFTQHKA--NKISSLDQSGRIKEFEVPTPDAKVMCLIVS-SLGDIWFTENGANKIGKLSKKGG 93 (300)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTT--TEEEEECTTSCEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTTSC
T ss_pred CCCCcceeeECCC-CCEEEEcCCC--CeEEEECCCCceEEEECCCCCCcceeEEEC-CCCCEEEEecCCCeEEEECCCCC
Confidence 4567889999875 6799998764 3788887763222221 1 5789999999 46789999998899999999977
Q ss_pred ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 642 FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
.....+......|.+|++++ .|.||+++.+. ..|.+.+.+|......+......|++|++|. .++||+++...+.|.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGL-NGDIWFTQLNG-DRIGKLTADGTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIG 170 (300)
T ss_dssp EEEEECSSTTCCEEEEEECS-TTCEEEEETTT-TEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEE
T ss_pred eEEecCCCCCCCCccceECC-CCCEEEEccCC-CeEEEECCCCCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeEE
Confidence 65444433557899999997 48899998654 3899999886544333334577899999996 677999999889999
Q ss_pred EEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 722 VSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 722 ~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
+++.+|......+.. .+..|.+|++. ++.||+++...+.|.+++. +|......+......|.+|++.
T Consensus 171 ~~~~~g~~~~~~~~~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d 238 (300)
T 2qc5_A 171 RITNTGKLEEYPLPT------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAG 238 (300)
T ss_dssp EECTTCCEEEEECSS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred EECCCCcEEEeeCCC------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEEC
Confidence 999977655432222 25789999996 6799999999999999987 5554443332334567776654
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=4e-12 Score=146.37 Aligned_cols=220 Identities=14% Similarity=0.067 Sum_probs=158.9
Q ss_pred ecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 563 IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 563 ~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
..+..-+.|+.+++.++.|||+|... .+|+++.+.+....... ...|.+|++++.++ ||++. ...|.+.++++.
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g 83 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPA--KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQ 83 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTT
T ss_pred ccCCccccCCeEECCCCEEEEEECCC--CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE--CCeEEEEECCCC
Confidence 34556678999999999999999985 48999998843333333 56789999997555 77775 468999998765
Q ss_pred ceEEEEcC----CCCCcceeeecCCcceEEEeeCCC----------CceEEEEecCCCCCEEEeecCCCCCeeEEeecCC
Q psy6572 642 FRKVLINK----GLQEPRGIALNPAYGYMYWTDWGQ----------NAHIGKAKMDGSNPKVIISKNLSWPNALTISYET 707 (1416)
Q Consensus 642 ~~~vLi~~----~l~~P~gIavDp~~g~LYWtD~g~----------~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~ 707 (1416)
..+.+... ....|++|++||. |+||+++++. ...|++++.+|.. ..+...+..|+||++++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~--~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHV--KKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE--EEEEEEESBEEEEEECTTS
T ss_pred cEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCE--EEEeeccccccceEEcCCC
Confidence 55555432 2456899999996 7799987532 2478888887643 3344567889999999888
Q ss_pred CeEEEecCCCCeEEEEeCC---CC--ceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 708 NELFWGDAHEDYIAVSDLN---GE--NIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ld---G~--~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
+.|||++...++|.+++++ |. +++++.... .....|.+|++. +++||++.+..++|.+++..+|+....+
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 8899999999999999874 32 234444321 013579999995 6799999999999999998778765555
Q ss_pred EeCCCCCCeeeeee
Q psy6572 782 VKNLVHKPMDLRVY 795 (1416)
Q Consensus 782 ~~~~~~~p~~I~v~ 795 (1416)
. .....|..++.-
T Consensus 237 ~-~p~~~~t~~~f~ 249 (297)
T 3g4e_A 237 K-LPVDKTTSCCFG 249 (297)
T ss_dssp E-CSSSBEEEEEEE
T ss_pred E-CCCCCceEEEEe
Confidence 4 223445555543
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.47 E-value=1.8e-12 Score=150.94 Aligned_cols=203 Identities=13% Similarity=0.148 Sum_probs=147.1
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee---------------------cCCCceEEEEccCCc
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP---------------------ATSPDGLTVDWVGRN 622 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~---------------------l~~p~gLAvD~~~~~ 622 (1416)
.+..|.+|++|.. +.|||++... ..|+++...+ ..+.+.. +..|.||++|...++
T Consensus 17 ~~~~p~~i~~d~~-g~~l~v~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 17 PSYAPNSFTFDST-NKGFYTSVQD--GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp SSSCCCCEECCTT-CSSEEEECTT--SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred ccCCceEEEEcCC-CCEEEEEcCC--CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 4678999999975 6677888764 4899987763 3433321 347999999987899
Q ss_pred EEEeeCCCCeEEEeecCCCceEEEEc----CCCCCcceeeecCCcceEEEeeCCC----------------CceEEEEec
Q psy6572 623 LYWCDKGLDTIEVAKLDGRFRKVLIN----KGLQEPRGIALNPAYGYMYWTDWGQ----------------NAHIGKAKM 682 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~~~vLi~----~~l~~P~gIavDp~~g~LYWtD~g~----------------~~~I~ra~m 682 (1416)
||+++... .|.++++++...+++.. ..+..|++|++|+..|.||++|.+. ..+|.+.+.
T Consensus 94 l~v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 94 LYIVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEEEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EEEEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 99999874 58888888655455542 2356799999999568999999752 246888877
Q ss_pred CCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCC---ceEEEEeccCCCCcccccceeEEEe-cCcEE
Q psy6572 683 DGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGE---NIKIIVSRRMDPTINLHHVFALAVF-EDHLF 758 (1416)
Q Consensus 683 DGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~---~r~~v~~~~~~p~~~l~~P~~lav~-~d~LY 758 (1416)
++...+++. ..+..|+||++++..++||++|...++|.+++++|. .++++.. +..|.+|++. ++.||
T Consensus 173 ~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--------~~gP~gi~~d~~G~l~ 243 (322)
T 2fp8_A 173 STKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--------IPNPGNIKRNADGHFW 243 (322)
T ss_dssp TTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--------CSSEEEEEECTTSCEE
T ss_pred CCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--------CCCCCCeEECCCCCEE
Confidence 654444433 457889999999877789999999999999999873 3444433 1229999996 56899
Q ss_pred EeecC----------CCeeEEecccCCCceEEE
Q psy6572 759 WTDWE----------MKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 759 wtD~~----------~~~I~~~nk~tG~~~~~l 781 (1416)
++++. .+.|.+++. .|.....+
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~ 275 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDE-FGNILEVI 275 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECT-TSCEEEEE
T ss_pred EEecCcccccccCCCccEEEEECC-CCCEEEEE
Confidence 99987 467888875 45543333
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.47 E-value=7.4e-12 Score=142.32 Aligned_cols=219 Identities=13% Similarity=0.140 Sum_probs=160.5
Q ss_pred eEEEEe--cEEEEEEecCCcc-eEEe------cccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEee--c
Q psy6572 541 NLLFTN--KYYIREVTQAGVM-TIRI------HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLFP--A 608 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~-~~~~------~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~~--l 608 (1416)
.|++++ ...|+++++++.. ..+. ..+..|.+|+++...++||+++... ...|+++..++.. ..+.. +
T Consensus 42 ~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-~~~i~~~d~~g~~~~~~~~~~~ 120 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-THQIQIYNQYGQFVRKFGATIL 120 (286)
T ss_dssp CEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-GCEEEEECTTSCEEEEECTTTC
T ss_pred CEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-CCEEEEECCCCcEEEEecCccC
Confidence 455554 4568888877655 2221 1235788999977789999998641 1378888755332 22222 5
Q ss_pred CCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc-CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC
Q psy6572 609 TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN-KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP 687 (1416)
Q Consensus 609 ~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~-~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r 687 (1416)
..|.+|++|+. ++||+++...++|.+.+.+|.....+.. ..+..|++|++++. |.||+++... .+|.+.+.+|...
T Consensus 121 ~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~-~~i~~~~~~g~~~ 197 (286)
T 1q7f_A 121 QHPRGVTVDNK-GRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRA-HCVKVFNYEGQYL 197 (286)
T ss_dssp SCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGG-TEEEEEETTCCEE
T ss_pred CCceEEEEeCC-CCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEEEECCC-CEEEEEcCCCCEE
Confidence 68999999974 5799999999999999999887666543 45678999999996 7799999654 4899999988755
Q ss_pred EEEeec-CCCCCeeEEeecCCCeEEEecCCCC-eEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCC
Q psy6572 688 KVIISK-NLSWPNALTISYETNELFWGDAHED-YIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEM 764 (1416)
Q Consensus 688 ~vlv~~-~l~~P~gLaiD~~~~rLYWtD~~~~-~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~ 764 (1416)
..+... .+..|.+|++|. .++||+++...+ .|...+.+|...+.+.... ....|.+|++. .++||++++ .
T Consensus 198 ~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-----~~~~~~~i~~~~~g~l~vs~~-~ 270 (286)
T 1q7f_A 198 RQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISALESKV-----KHAQCFDVALMDDGSVVLASK-D 270 (286)
T ss_dssp EEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEEEEESS-----CCSCEEEEEEETTTEEEEEET-T
T ss_pred EEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-----CCCcceeEEECCCCcEEEECC-C
Confidence 544433 367899999996 679999999886 9999999998777665532 24568899995 578999975 5
Q ss_pred CeeEEe
Q psy6572 765 KSIERC 770 (1416)
Q Consensus 765 ~~I~~~ 770 (1416)
++|...
T Consensus 271 ~~v~v~ 276 (286)
T 1q7f_A 271 YRLYIY 276 (286)
T ss_dssp TEEEEE
T ss_pred CeEEEE
Confidence 565544
No 48
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.45 E-value=8.8e-16 Score=164.26 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=102.2
Q ss_pred CCCCCCCCCccccccccCCCCCcCCCCCCccc--CCCceecCceeecCCCCCCCCCCCCCCCCCCCCCCCccCCCCCcee
Q psy6572 136 QNDCFDMSDEQNCDQIKDVSPKMNCSGDKFLC--RNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTESTCKANNNVFQ 213 (1416)
Q Consensus 136 ~~DC~D~sDE~~C~~~~~~~~~~~C~~~~f~C--~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~~~C~~~~~~F~ 213 (1416)
-.+|.|+|||.+|. +|++++|+| .+|+|||.+|+|||++||.|| |||.+|+. .+|.+ ++|+
T Consensus 40 ~~~c~d~sDE~~C~---------~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~Dg-----SDE~~C~~-~~C~~--~~F~ 102 (215)
T 2gtl_O 40 AGSLRHRVEELEDP---------SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNG-----EDEKDCTL-PTKAG--DKFI 102 (215)
T ss_dssp HHHHHHHHHHHSCC---------SSCTTEEECCSSSCCEEEGGGTTSSSCCSSSC-----HHHHCCCC-SSCTT--CEEE
T ss_pred cccCCcchhhccCC---------CCCCcceeeCCCCCcCccccccCCCCCcCCCc-----ccccCCCC-CCcCC--Ccee
Confidence 35899999999995 599999999 799999999999999999999 99999974 78988 9999
Q ss_pred cCCCCceecCcccccCCCCCCCCCCCCCCcccCCCCC--CCceeeCCC--CCeEc-----------CcccccCCCCCCCC
Q psy6572 214 CDNNKTCISKSWVCDGTYDCTDRSDENSTYCAHSECN--LFEFRCNST--GQCIP-----------ITWVCDGVTDCIDK 278 (1416)
Q Consensus 214 C~~~~~CI~~~w~CDg~~DC~D~sDE~~~~c~~~~C~--~~~F~C~~~--~~CI~-----------~~w~CDG~~DC~Dg 278 (1416)
| ++ ++. .|.+++||.. |. ..|+ ..+|.|... +.||. .+|.|||..| +|
T Consensus 103 c------~~-----~~~-~C~~~~~~~~--c~-~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd--~g 165 (215)
T 2gtl_O 103 G------DV-----CFD-HCTKRRPEHM--TL-AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS--FA 165 (215)
T ss_dssp E------EE-----EEE-SSCSSCCSEE--EE-EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE--TT
T ss_pred e------eE-----CCC-cccCCCCCCc--ee-eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec--CC
Confidence 8 12 333 3888888864 43 3344 478888433 35888 9999999999 69
Q ss_pred CCCccccCCcccccccCCeeecC
Q psy6572 279 SDEHHSQDCLNVETCMEGYFKCL 301 (1416)
Q Consensus 279 sDE~~~~~C~~~~~C~~~~f~C~ 301 (1416)
|+| ..|.+ +.+...+|+|.
T Consensus 166 s~e---l~~~p-p~~~~l~f~C~ 184 (215)
T 2gtl_O 166 DHR---LTIHP-PEEDGLGLVGE 184 (215)
T ss_dssp TTE---EEECC-SSTTTEEEEEE
T ss_pred cce---eeecC-CCCCCceeEEE
Confidence 999 56754 44666788884
No 49
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=2.9e-11 Score=137.19 Aligned_cols=217 Identities=14% Similarity=0.219 Sum_probs=157.1
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEe-e--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLF-P--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~-~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
....|.+|++|.. ++||+++... ..|.++.++.....+. . ...|.+|++|. .++||+++...+.|.+.+++|.
T Consensus 13 ~~~~~~~i~~d~~-g~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDK-GKVWITQHKA--NMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp SSCCEEEEEECTT-SCEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSC
T ss_pred cCCCccceEECCC-CCEEEEecCC--CcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCc
Confidence 3457889999864 5688887753 3788887773323222 1 56799999996 6789999988889999999877
Q ss_pred ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 642 FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
.....+......|.+|++++. |.||+++.+. ..|.+.+.+|......+......|++|++|. .++||+++...+.|.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~-~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPN-GDIWFTEMNG-NRIGRITDDGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAIG 165 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTT-SCEEEEETTT-TEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEE
T ss_pred EEEEeCCCcCCCceeeEECCC-CCEEEEecCC-ceEEEECCCCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEE
Confidence 544443335678999999985 7899998553 4799998866554444444567899999995 679999998889999
Q ss_pred EEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 722 VSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 722 ~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
+++.+|......+.. ....|.+|++. .+.||+++...+.|.+++. +|.............|.+|++.
T Consensus 166 ~~~~~g~~~~~~~~~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 166 RITESGDITEFKIPT------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAG 233 (299)
T ss_dssp EECTTCCEEEEECSS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred EEcCCCcEEEeeCCC------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEEC
Confidence 999966544322222 25679999996 5789999998999999988 6664333222234566666653
No 50
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.39 E-value=1.5e-11 Score=140.72 Aligned_cols=205 Identities=18% Similarity=0.187 Sum_probs=151.3
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeec
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l 638 (1416)
+++..+...+.+++|++.++.|||++... ..|+++.+++..+.+.. ...|.+|++|+ .++||+++.+.+.|.+.++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQ--NRTWAWSDDGQLSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGG--TEEEEEETTSCEEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCC--CEEEEEECCCCeEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcC
Confidence 55666778899999999998999999885 48999998844444443 66799999997 5679999998899999998
Q ss_pred -CCCceEEEEc---CCCCCcceeeecCCcceEEEeeC--CC--------------CceEEEEecCCCCCEEEeecCCCCC
Q psy6572 639 -DGRFRKVLIN---KGLQEPRGIALNPAYGYMYWTDW--GQ--------------NAHIGKAKMDGSNPKVIISKNLSWP 698 (1416)
Q Consensus 639 -dG~~~~vLi~---~~l~~P~gIavDp~~g~LYWtD~--g~--------------~~~I~ra~mDGs~r~vlv~~~l~~P 698 (1416)
+|..+.++.. ..+..|++|++||. |.||+||. +. ...|++++.+|. ...+...+..|
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT--LSAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC--EEEEECCCSSE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCCCC--EEEeecCCCCC
Confidence 6665433221 22457899999985 78999874 11 237899888743 34445678899
Q ss_pred eeEEeecCCCeEEEecCCCCeEEEEeCC--CCc---eEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecc
Q psy6572 699 NALTISYETNELFWGDAHEDYIAVSDLN--GEN---IKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 699 ~gLaiD~~~~rLYWtD~~~~~I~~~~ld--G~~---r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk 772 (1416)
+||++++..+.| |++...+.|.+++++ |.- ++++ ... ...|.+|++. +++||++. .+.|.+++.
T Consensus 175 ~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~------~~~p~~i~~d~~G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVE------PGKTDGLRVDAGGLIWASA--GDGVHVLTP 244 (296)
T ss_dssp EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCS------SSCCCSEEEBTTSCEEEEE--TTEEEEECT
T ss_pred ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCC------CCCCCeEEECCCCCEEEEc--CCeEEEECC
Confidence 999999766666 999999999999985 443 3333 322 5678999995 67888888 678888876
Q ss_pred cCCCceEEE
Q psy6572 773 YTGKNCTSV 781 (1416)
Q Consensus 773 ~tG~~~~~l 781 (1416)
. |.....+
T Consensus 245 ~-g~~~~~~ 252 (296)
T 3e5z_A 245 D-GDELGRV 252 (296)
T ss_dssp T-SCEEEEE
T ss_pred C-CCEEEEE
Confidence 4 5544433
No 51
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.38 E-value=3e-11 Score=139.79 Aligned_cols=212 Identities=12% Similarity=0.086 Sum_probs=151.7
Q ss_pred CeEEEEe--cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee---cCCCce
Q psy6572 540 PNLLFTN--KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP---ATSPDG 613 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~---l~~p~g 613 (1416)
..|||++ ...|++++.++...........|.+|+++..+ +||+++...+...|+++... ...+.+.. ...+.|
T Consensus 43 g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g 121 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNG 121 (306)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEE
T ss_pred CCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCc
Confidence 3477765 46799998887653333344578999998765 59999976432357777655 44555544 456788
Q ss_pred EEEEccCCcEEEeeCCCCeEEEeecCCCceEEE-E---------cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 614 LTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVL-I---------NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 614 LAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vL-i---------~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
+++ |..+++|++|...++|+++++++...++. . ...+..|+|| ++..++||+++...+ +|.+++++
T Consensus 122 ~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~-~I~~~~~~ 197 (306)
T 2p4o_A 122 ITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKM-LLLRIPVD 197 (306)
T ss_dssp EEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTT-EEEEEEBC
T ss_pred ccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCC-EEEEEEeC
Confidence 886 67889999999889999999876432222 1 1356679998 666789999997754 89999998
Q ss_pred CC----CCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-----c
Q psy6572 684 GS----NPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-----E 754 (1416)
Q Consensus 684 Gs----~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-----~ 754 (1416)
+. .++++.. +..|.||+||. +++||++++..++|.+++.+|.... +.... ..+..|.++++. .
T Consensus 198 ~~g~~~~~~~~~~--~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~G~~~~-~~~~~----~~~~~p~~~a~~g~~~d~ 269 (306)
T 2p4o_A 198 STDKPGEPEIFVE--QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPDRSTTI-IAQAE----QGVIGSTAVAFGQTEGDC 269 (306)
T ss_dssp TTSCBCCCEEEEE--SCCCSSEEEBT-TCCEEEECBTTCCEEEECTTCCEEE-EECGG----GTCTTEEEEEECCSTTTT
T ss_pred CCCCCCccEEEec--cCCCCCeEECC-CCCEEEEeCCCCeEEEECCCCCEEE-Eeecc----cccCCceEEEEecccCCC
Confidence 52 2344433 46899999996 6799999999999999999876432 22211 126789999985 2
Q ss_pred CcEEEeecCC
Q psy6572 755 DHLFWTDWEM 764 (1416)
Q Consensus 755 d~LYwtD~~~ 764 (1416)
++||+++...
T Consensus 270 ~~LyVt~~~~ 279 (306)
T 2p4o_A 270 TAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECTT
T ss_pred CEEEEECCCC
Confidence 6899999864
No 52
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=3.7e-11 Score=138.72 Aligned_cols=206 Identities=19% Similarity=0.221 Sum_probs=150.6
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeec
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l 638 (1416)
+.+..+...+.++++++.++.|||++... ..|+++..++..+++.. ...|.+|++|+. ++||+++.+.++|.+.++
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~--~~i~~~~~~g~~~~~~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVG--RRVLGWREDGTVDVLLDATAFTNGNAVDAQ-QRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTT--TEEEEEETTSCEEEEEESCSCEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCC--CEEEEEeCCCCEEEEeCCCCccceeeECCC-CCEEEEECCCCEEEEECC
Confidence 66777888899999999999999999885 48999887644444444 677999999974 669999998889999999
Q ss_pred CCCceEEEEc---CCCCCcceeeecCCcceEEEeeC--CC--------------CceEEEEecCCCCCEEEeecCCCCCe
Q psy6572 639 DGRFRKVLIN---KGLQEPRGIALNPAYGYMYWTDW--GQ--------------NAHIGKAKMDGSNPKVIISKNLSWPN 699 (1416)
Q Consensus 639 dG~~~~vLi~---~~l~~P~gIavDp~~g~LYWtD~--g~--------------~~~I~ra~mDGs~r~vlv~~~l~~P~ 699 (1416)
+|+.+.++.. ..+..|++|++++. |.||+||. +. ...|++.+.++...+.+. .+..|+
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~ 191 (305)
T 3dr2_A 115 DGQAHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN 191 (305)
T ss_dssp TSCEEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred CCCEEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence 9775433221 12567999999985 88999873 11 247899888544444443 678899
Q ss_pred eEEeecCCCeEEEecCCC-----CeEEEEeCCCCc---eEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEe
Q psy6572 700 ALTISYETNELFWGDAHE-----DYIAVSDLNGEN---IKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 700 gLaiD~~~~rLYWtD~~~-----~~I~~~~ldG~~---r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~ 770 (1416)
||++++..+.|||++... +.|.++++++.. .+++.... ...|.+|++. ++.||++. .+.|.++
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~------~~~pdgi~~d~~G~lwv~~--~~gv~~~ 263 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP------DGLPDGFCVDRGGWLWSSS--GTGVCVF 263 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS------SSCCCSEEECTTSCEEECC--SSEEEEE
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC------CCCCCeEEECCCCCEEEec--CCcEEEE
Confidence 999998777899999874 789999987643 23333321 4568899995 56777776 3458888
Q ss_pred cccCCCceEE
Q psy6572 771 DKYTGKNCTS 780 (1416)
Q Consensus 771 nk~tG~~~~~ 780 (1416)
+. +|+....
T Consensus 264 ~~-~g~~~~~ 272 (305)
T 3dr2_A 264 DS-DGQLLGH 272 (305)
T ss_dssp CT-TSCEEEE
T ss_pred CC-CCCEEEE
Confidence 76 4554333
No 53
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.37 E-value=2.3e-11 Score=140.81 Aligned_cols=212 Identities=13% Similarity=0.037 Sum_probs=147.7
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCC--eEEEeec-CCCc
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLD--TIEVAKL-DGRF 642 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~--~I~v~~l-dG~~ 642 (1416)
..+.+++++. +++|||+|... .+|+++..++....+.. ...|.+|+++.. ++||+++...+ +|.+++. +|..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~--~~I~~~d~~g~~~~~~~~~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEV--GEIVSITPDGNQQIHATVEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTT--TEEEEECTTCCEEEEEECSSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECC-CCCEEEEeCCC--CeEEEECCCCceEEEEeCCCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeE
Confidence 5688999998 56799999875 48999988754444444 567999999975 56999997643 5777764 4544
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE-e---------ecCCCCCeeEEeecCCCeEEE
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI-I---------SKNLSWPNALTISYETNELFW 712 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl-v---------~~~l~~P~gLaiD~~~~rLYW 712 (1416)
..+........|.|+++.+ .+++|++|... .+|++++.++...++. . ...+..|+|| ++..++||+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~-g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQYLTADSYR-GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSEEEEEETTT-TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEeCCCccccCcccccC-CCcEEEEECCC-CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 3333224566789999854 57899999654 4899998875322222 1 1346789999 444789999
Q ss_pred ecCCCCeEEEEeCCC--C--ceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE-EeCCC
Q psy6572 713 GDAHEDYIAVSDLNG--E--NIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV-VKNLV 786 (1416)
Q Consensus 713 tD~~~~~I~~~~ldG--~--~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l-~~~~~ 786 (1416)
+|...++|.++++++ . .++++.. +..|.+|++. +++||++++..++|.+++. .|....+. +...+
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~--------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~-~G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVE--------QTNIDDFAFDVEGNLYGATHIYNSVVRIAP-DRSTTIIAQAEQGV 254 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEE--------SCCCSSEEEBTTCCEEEECBTTCCEEEECT-TCCEEEEECGGGTC
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEec--------cCCCCCeEECCCCCEEEEeCCCCeEEEECC-CCCEEEEeeccccc
Confidence 999999999999875 2 2333332 4579999996 6799999999999999975 35432221 11223
Q ss_pred CCCeeeeee
Q psy6572 787 HKPMDLRVY 795 (1416)
Q Consensus 787 ~~p~~I~v~ 795 (1416)
..|.++++-
T Consensus 255 ~~p~~~a~~ 263 (306)
T 2p4o_A 255 IGSTAVAFG 263 (306)
T ss_dssp TTEEEEEEC
T ss_pred CCceEEEEe
Confidence 566666654
No 54
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.37 E-value=1.9e-11 Score=144.86 Aligned_cols=227 Identities=16% Similarity=0.142 Sum_probs=153.6
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEe------e-cCCCceEEEEcc---CCcEEEeeCC
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLF------P-ATSPDGLTVDWV---GRNLYWCDKG 629 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~------~-l~~p~gLAvD~~---~~~LYwtD~~ 629 (1416)
+++..++..|.+|++++.. +||+++.. ++|+++. ++..+.+. . +..|.|||+++. ++.||+++..
T Consensus 24 ~~va~~l~~P~~ia~~pdG-~l~V~e~~---g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPDG-GMLIAERP---GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp EEEECCCSCEEEEEECTTS-CEEEEETT---TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEEECCCCCceEEEEcCCC-eEEEEeCC---CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 5677789999999999865 59999876 3888887 53223222 2 568999999987 7899999875
Q ss_pred C-----CeEEEeecCCC---ceEEEEc------CCCCCcceeeecCCcceEEEeeCC------------CCceEEEEecC
Q psy6572 630 L-----DTIEVAKLDGR---FRKVLIN------KGLQEPRGIALNPAYGYMYWTDWG------------QNAHIGKAKMD 683 (1416)
Q Consensus 630 ~-----~~I~v~~ldG~---~~~vLi~------~~l~~P~gIavDp~~g~LYWtD~g------------~~~~I~ra~mD 683 (1416)
. ++|.++++++. ..++|+. .....|.+|+++|. |+||+++.. ...+|.|++.+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 4 78999998864 2334432 23457899999996 799999732 12589999999
Q ss_pred CC------------CCEEEeecCCCCCeeEEeecCCCeEEEecCCCCe--------EEEEeCCCCceE---EE----Eec
Q psy6572 684 GS------------NPKVIISKNLSWPNALTISYETNELFWGDAHEDY--------IAVSDLNGENIK---II----VSR 736 (1416)
Q Consensus 684 Gs------------~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~--------I~~~~ldG~~r~---~v----~~~ 736 (1416)
|+ .+..++...+..|.||++|+.+++||++|...+. |.++.. |.+.- .. ...
T Consensus 178 G~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~~~~~ 256 (352)
T 2ism_A 178 GEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRGNDPR 256 (352)
T ss_dssp SSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCCCCTT
T ss_pred CCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCCCCCC
Confidence 83 1233455678999999999888999999987665 444432 22100 00 000
Q ss_pred cCCCCcc---cccceeEEEecCcEEEeecCCCeeEEecccCCCc------eEEEEeCCCCCCeeeee
Q psy6572 737 RMDPTIN---LHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKN------CTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 737 ~~~p~~~---l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~------~~~l~~~~~~~p~~I~v 794 (1416)
..+|... ...|.+|+++++.||++++..++|.++....... ...++ ....+|.+|++
T Consensus 257 ~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~ 322 (352)
T 2ism_A 257 YRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQV 322 (352)
T ss_dssp SCCCSEECTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEE
T ss_pred CcCCeEecCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEE
Confidence 0011111 2368999999999999999999999987543321 12222 23456666665
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.34 E-value=1.3e-10 Score=136.04 Aligned_cols=238 Identities=12% Similarity=0.051 Sum_probs=162.4
Q ss_pred CeEEEEe--cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cC-----
Q psy6572 540 PNLLFTN--KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-AT----- 609 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~----- 609 (1416)
..|+++. ...|..+++.... ...+.....|.+|++++.+ +||+++... ..|.++++.+. ....+. ..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~--~~v~~iD~~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWD--YRIFIINPKTYEITGYIECPDMDMES 130 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSC--SEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCC--CeEEEEECCCCeEEEEEEcCCccccC
Confidence 3455544 3568888876444 2223456789999997654 999999543 38998888732 221222 33
Q ss_pred -CCceEEEEccCCcEEEeeCC-CCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCC---------CceE
Q psy6572 610 -SPDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQ---------NAHI 677 (1416)
Q Consensus 610 -~p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~---------~~~I 677 (1416)
.|.+|++ .+++||+++++ .++|.++++.... ...+. ....|.+|+++|. |+||++..+. ...|
T Consensus 131 ~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--~g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 131 GSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT--IGIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp CBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE--CSSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEE
T ss_pred CCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--cCCCccceEEcCC-CCEEEEECCCccCCccccCCceE
Confidence 7999999 48999999985 7899999987543 33332 2457999999986 6799998764 2478
Q ss_pred EEEecCCCCCE-EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceE--EEEeccCCCCcccccceeEEEe-
Q psy6572 678 GKAKMDGSNPK-VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIK--IIVSRRMDPTINLHHVFALAVF- 753 (1416)
Q Consensus 678 ~ra~mDGs~r~-vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~--~v~~~~~~p~~~l~~P~~lav~- 753 (1416)
.++++...... .+......+|++|++++..++||+++. .|+++++...... .++.. ....|.+|++.
T Consensus 206 ~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~------~~~~p~gi~vdp 276 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEF------RDTKYYGLTVNP 276 (328)
T ss_dssp EEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCC------CSSCEEEEEECT
T ss_pred EEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecC------CCCceEEEEEcC
Confidence 88887643322 222222358999999988999999986 8888887644321 01110 13579999994
Q ss_pred -cCcEEEee----cCCCeeEEecccCCCceEEEEeCCCCCCeeeeeecc
Q psy6572 754 -EDHLFWTD----WEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHP 797 (1416)
Q Consensus 754 -~d~LYwtD----~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~ 797 (1416)
+++||+++ +..+.|.+++.. |+....+. .-..|.+|+.=|.
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~--~G~~P~~~~~~~~ 322 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY--VGIIPGAFCWKLE 322 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE--EEESEEEEEEECC
T ss_pred CCCeEEEEcccccccCCEEEEECCC-CCEEEEEE--eccCcceEEEecc
Confidence 78999999 788899999875 76555543 3445666665443
No 56
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.29 E-value=1.1e-12 Score=164.62 Aligned_cols=103 Identities=35% Similarity=0.692 Sum_probs=85.3
Q ss_pred CceecCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceecCCCceeCCCcccCCCCCCCCCCcCcCCCCCCC
Q psy6572 1015 DYIRCDTGRCIPKTWQCDGDVDCPNREDEPPSCADPNLYTCDPTYFKCNNYKCIPGSWHCDYDDDCGDGSDEKNCTPRNC 1094 (1416)
Q Consensus 1015 ~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~C~~~~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C 1094 (1416)
..|.|..+.+++..+.+|+..+|.+.+++ .+...+|+|.+++|||..|+|||..||.|+|||.+|.. |
T Consensus 174 sl~~C~~~~~~~~~h~~DagV~C~~~~~~----------c~~~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE~~C~~--c 241 (565)
T 2xrc_A 174 SLAECTFTKRRTMGYQDFADVVCYTQKAD----------SPMDDFFQCVNGKYISQMKACDGINDCGDQSDELCCKA--C 241 (565)
T ss_dssp CGGGSEEECCCCCSSCCCCEEEBCCC-------------------CBCTTSCBCCTTSTTSSSCCSSSSSSSSSBSS--C
T ss_pred chhhcccCcccccccccCCceeccccccC----------CCCcCeeECCCCCccCHHHcCCCcccCCCCcccccccc--c
Confidence 45677766678888999999999987655 13445699999999999999999999999999999964 9
Q ss_pred CCCCcccCCCeeeCCCccccCCCCCCCCCCCcCcc
Q psy6572 1095 SESEFRCANGKCIRPHYVCNGENDCADHSDEINCN 1129 (1416)
Q Consensus 1095 ~~~~f~C~~g~Ci~~~~~CDg~~DC~d~sDE~~C~ 1129 (1416)
.+.+|+|.++.||+..++|||..||.||+||.+|.
T Consensus 242 ~~~~~~C~~~~C~~~~~~cdG~~dC~~gsDE~~C~ 276 (565)
T 2xrc_A 242 QGKGFHCKSGVCIPSQYQCNGEVDCITGEDEVGCA 276 (565)
T ss_dssp SSSCEEETTTEEECGGGTTSSSCCSSSCTTSSSCC
T ss_pred CCCceecCCCcccCccccCCCcccCCCCccccCcC
Confidence 99999999999999999999999999999998885
No 57
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.28 E-value=1.9e-10 Score=136.23 Aligned_cols=228 Identities=13% Similarity=0.086 Sum_probs=154.5
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-------cCCCceEEEEcc---CCcEEEeeCC
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-------ATSPDGLTVDWV---GRNLYWCDKG 629 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-------l~~p~gLAvD~~---~~~LYwtD~~ 629 (1416)
+++..++..|.+|++++ .++||+++.. ++|+++..++. +++.. ...|.|||+++. ++.||+++..
T Consensus 22 ~~va~~l~~P~~ia~~p-dG~l~V~e~~---g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLG-GGRYLVTERP---GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEECSCSCEEEEEEEE-TTEEEEEETT---TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEEeCCCCCCeEEEEcC-CCeEEEEeCC---CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 45667889999999998 4679999886 38888864443 44432 467999999987 8999999864
Q ss_pred ---C----CeEEEeecCCC-----ceEEEEc----CCCCCcceeeecCCcceEEEeeCC------------CCceEEEEe
Q psy6572 630 ---L----DTIEVAKLDGR-----FRKVLIN----KGLQEPRGIALNPAYGYMYWTDWG------------QNAHIGKAK 681 (1416)
Q Consensus 630 ---~----~~I~v~~ldG~-----~~~vLi~----~~l~~P~gIavDp~~g~LYWtD~g------------~~~~I~ra~ 681 (1416)
. .+|.++++++. ..++|+. .....|.+|+++|. |+||++.-. ...+|.|++
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~ 175 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTGDAADPRLAQDLSSLAGKILRVD 175 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence 3 68999998875 2444433 33557999999995 799999621 124899999
Q ss_pred cCCCC-------CEEEeecCCCCCeeEEeecCCCeEEEecCCCCe---EEEEeCCCCceE-------EEEeccCCCCcc-
Q psy6572 682 MDGSN-------PKVIISKNLSWPNALTISYETNELFWGDAHEDY---IAVSDLNGENIK-------IIVSRRMDPTIN- 743 (1416)
Q Consensus 682 mDGs~-------r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~---I~~~~ldG~~r~-------~v~~~~~~p~~~- 743 (1416)
.||+. ...++..++..|.||++|+.+++||++|...+. |..+. .|.+.- ....+...|...
T Consensus 176 ~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 176 EEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL-KGGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp TTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC-TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec-CCCcCCCCcccCCCCCCCCcCCEeec
Confidence 99972 234556689999999999888999999987654 44443 232110 000000011111
Q ss_pred ---cccceeEEE--------ecCcEEEeecCCCeeEEecccCCCce---EEEEeCCCCCCeeeee
Q psy6572 744 ---LHHVFALAV--------FEDHLFWTDWEMKSIERCDKYTGKNC---TSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 744 ---l~~P~~lav--------~~d~LYwtD~~~~~I~~~nk~tG~~~---~~l~~~~~~~p~~I~v 794 (1416)
...|.+|++ +.+.||++++..++|.++........ ..++.....+|.+|++
T Consensus 255 ~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~ 319 (354)
T 3a9g_A 255 GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI 319 (354)
T ss_dssp TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEE
T ss_pred CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEE
Confidence 245899999 57899999999999999875432211 2232122445666655
No 58
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.28 E-value=9.7e-13 Score=128.11 Aligned_cols=84 Identities=39% Similarity=0.863 Sum_probs=39.6
Q ss_pred CCCCcccccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcE
Q psy6572 446 DEFSCFVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYA 524 (1416)
Q Consensus 446 De~~C~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~ 524 (1416)
....|+++||...+++ |++.|++++++|+|.|++||.+. +++.|++||||. ..+|.++|+|++|+|+|.|++||+
T Consensus 23 ~~~~Cd~neC~~~~~~--C~~~C~n~~g~y~C~C~~Gy~g~--~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~ 98 (107)
T 2w2n_E 23 FQGAMGTNECLDNNGG--CSYVCNDLKIGYECLCPDGFQLV--AQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 98 (107)
T ss_dssp CSCCBSCCGGGTGGGG--CSSEEECCSBSCEEECCTTCEEE--TTTEEEC------------------------------
T ss_pred CCCCCcCccCcCCCCC--CCCEeEeCCCCeEEECCCCcccc--CCCccccccccCCCCCcCCeeecCCCCEEEECCCCce
Confidence 3456889999876666 99999999999999999999985 677899999998 589999999999999999999999
Q ss_pred EecCCCceE
Q psy6572 525 LLSDKHGCK 533 (1416)
Q Consensus 525 L~~dg~sC~ 533 (1416)
+..++++|+
T Consensus 99 ~~~d~~~C~ 107 (107)
T 2w2n_E 99 LDPHTKACK 107 (107)
T ss_dssp ---------
T ss_pred ECCCCCccC
Confidence 999998884
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.28 E-value=1.7e-09 Score=125.61 Aligned_cols=242 Identities=14% Similarity=0.117 Sum_probs=167.7
Q ss_pred CCeEEEEe--------cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeec
Q psy6572 539 PPNLLFTN--------KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPA 608 (1416)
Q Consensus 539 ~~~li~s~--------~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l 608 (1416)
..+|+++. ...|+.+++.+.. ...+.....+.++++++.+++||+++.... .|..+.+. ......+.+
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~ 129 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS--AVTAIDAKTGEVKGRLVL 129 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT--EEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC--EEEEEeCCCCeeEEEEec
Confidence 45667666 4578888876554 222233456889999999999999988743 88888887 332222222
Q ss_pred C-----------CCceEEEEccCCcEEEeeCC-CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCce
Q psy6572 609 T-----------SPDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAH 676 (1416)
Q Consensus 609 ~-----------~p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~ 676 (1416)
. .|.+|++++.++.||+++.+ .++|.+.++........+......|.+|+++|..++||+++. ...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~ 207 (353)
T 3vgz_A 130 DDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA--DGE 207 (353)
T ss_dssp CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT--TSE
T ss_pred CCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC--CCe
Confidence 1 27889999999999999954 678999998765544444334456999999999999999985 347
Q ss_pred EEEEecCCCCCEEEeec----CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEE
Q psy6572 677 IGKAKMDGSNPKVIISK----NLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAV 752 (1416)
Q Consensus 677 I~ra~mDGs~r~vlv~~----~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav 752 (1416)
|.+.++........+.. ....|.+|++++..++||+++...+.|..+++........+. +..|.++++
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~ 279 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA--------APESLAVLF 279 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE--------CSSCCCEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--------cCCCceEEE
Confidence 88777654433322322 234577899999888999999888999999985443333322 345677777
Q ss_pred e--cCcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeee
Q psy6572 753 F--EDHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 753 ~--~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v 794 (1416)
. +.+||+++...+.|..++..+++....+. ....|.+|.+
T Consensus 280 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~ 321 (353)
T 3vgz_A 280 NPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD--TPTHPNSLAL 321 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEEEEEEE--CCSEEEEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEECCCCeEEEEEe--cCCCCCeEEE
Confidence 4 45699999999999999877776554443 2234555554
No 60
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=4.6e-10 Score=128.63 Aligned_cols=223 Identities=17% Similarity=0.209 Sum_probs=154.5
Q ss_pred eEEecccccceeeeeecCCCeEEEe-------eccCCCccEEEEecC-CCCeEEee------cCCCceEEEEccCCcEEE
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWS-------DVTMHGSSIRRSCNN-SQPELLFP------ATSPDGLTVDWVGRNLYW 625 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwt-------D~~~~~~~I~r~~l~-s~~~~l~~------l~~p~gLAvD~~~~~LYw 625 (1416)
..+..++..+.+++|+ ..+.|||+ +... ..|+++.+. .....+.. ...|.+|++|+.+++||+
T Consensus 11 ~~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPA--GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp EEEECCCTTCEEEEEC-TTSCEEEEETTCEETTEEC--CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE
T ss_pred hhhhccCCCccCceEC-CCCCEEEEEeccccCCCCC--CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE
Confidence 3456678889999999 56789999 6653 378888876 33333321 367899999987689999
Q ss_pred eeCCCCeEEEeecCCCceEEE-Ec----CCCCCcceeeecCCcceEEEeeCCC--------------CceEEEEecCCCC
Q psy6572 626 CDKGLDTIEVAKLDGRFRKVL-IN----KGLQEPRGIALNPAYGYMYWTDWGQ--------------NAHIGKAKMDGSN 686 (1416)
Q Consensus 626 tD~~~~~I~v~~ldG~~~~vL-i~----~~l~~P~gIavDp~~g~LYWtD~g~--------------~~~I~ra~mDGs~ 686 (1416)
++... .|.+.+++|..+ .+ .. .....|++|++|+. |.||+++.+. ...|.+.+.+|..
T Consensus 88 ~~~~~-~l~~~d~~g~~~-~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 164 (314)
T 1pjx_A 88 ADMRL-GLLVVQTDGTFE-EIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM 164 (314)
T ss_dssp EETTT-EEEEEETTSCEE-ECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE
T ss_pred EECCC-CEEEEeCCCCEE-EEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCCCCE
Confidence 98754 799999885543 33 22 12356999999986 7899998653 1478998887543
Q ss_pred CEEEeecCCCCCeeEEee----cCCCeEEEecCCCCeEEEEeCCCCce----EEEEeccCCCCcccccceeEEEe-cCcE
Q psy6572 687 PKVIISKNLSWPNALTIS----YETNELFWGDAHEDYIAVSDLNGENI----KIIVSRRMDPTINLHHVFALAVF-EDHL 757 (1416)
Q Consensus 687 r~vlv~~~l~~P~gLaiD----~~~~rLYWtD~~~~~I~~~~ldG~~r----~~v~~~~~~p~~~l~~P~~lav~-~d~L 757 (1416)
+ .+...+..|++|+++ +..++|||++...+.|.++++++... +++.... ......|.+|++. .+.|
T Consensus 165 ~--~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 165 I--QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP---GTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp E--EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC---CCSSCEEEEEEEBTTCCE
T ss_pred E--EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC---CCCCCCCCceEECCCCCE
Confidence 2 223356679999998 76668999999889999998763221 1222211 0001568999986 5789
Q ss_pred EEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeee
Q psy6572 758 FWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 758 YwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v 794 (1416)
|++++..+.|.+++..+|.....+. .....|.+|++
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~ 275 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHF 275 (314)
T ss_dssp EEEEETTTEEEEECTTCBSCSEEEE-CSSSCEEEEEE
T ss_pred EEEEcCCCEEEEEcCCCCcEeEEEe-CCCCCceeEEE
Confidence 9999888999999876666554443 22345666655
No 61
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.24 E-value=3.5e-12 Score=160.07 Aligned_cols=104 Identities=27% Similarity=0.601 Sum_probs=86.4
Q ss_pred CCceeec-ceEeccceecCCcCCCCCCCCCCCCCCCCccCCCceecCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy6572 975 ANEFQCD-VKCISLALVCDKVFDCLDRSDEPADCTSQTCGPDYIRCDTGRCIPKTWQCDGDVDCPNREDEPPSCADPNLY 1053 (1416)
Q Consensus 975 ~~~f~C~-~~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~C~~~~~~ 1053 (1416)
...|.|. +.+++..+.+|+..+|.+.+++ | |...+|+|.+|+||+..|+|||..||.||||| .+|.
T Consensus 173 ~sl~~C~~~~~~~~~h~~DagV~C~~~~~~---c----~~~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE-~~C~----- 239 (565)
T 2xrc_A 173 TSLAECTFTKRRTMGYQDFADVVCYTQKAD---S----PMDDFFQCVNGKYISQMKACDGINDCGDQSDE-LCCK----- 239 (565)
T ss_dssp SCGGGSEEECCCCCSSCCCCEEEBCCC----------------CBCTTSCBCCTTSTTSSSCCSSSSSSS-SSBS-----
T ss_pred CchhhcccCcccccccccCCceeccccccC---C----CCcCeeECCCCCccCHHHcCCCcccCCCCccc-cccc-----
Confidence 4567888 6688889999999999977654 2 34567999999999999999999999999999 5885
Q ss_pred CCCCCceecCCCceeCCCcccCCCCCCCCCCcCcCCCC
Q psy6572 1054 TCDPTYFKCNNYKCIPGSWHCDYDDDCGDGSDEKNCTP 1091 (1416)
Q Consensus 1054 ~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~ 1091 (1416)
.|.+.+|+|.++.||+..++|||..||.||+||.+|..
T Consensus 240 ~c~~~~~~C~~~~C~~~~~~cdG~~dC~~gsDE~~C~~ 277 (565)
T 2xrc_A 240 ACQGKGFHCKSGVCIPSQYQCNGEVDCITGEDEVGCAG 277 (565)
T ss_dssp SCSSSCEEETTTEEECGGGTTSSSCCSSSCTTSSSCC-
T ss_pred ccCCCceecCCCcccCccccCCCcccCCCCccccCcCC
Confidence 38999999999999999999999999999999998863
No 62
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.23 E-value=6e-12 Score=117.68 Aligned_cols=81 Identities=32% Similarity=0.772 Sum_probs=69.3
Q ss_pred ccccccCCCCCCcccc-cceecCCceEEeeCCCceecCCCCCccccCCcCC--CCCcc-ceeeecCCeeeecCCCCcEEe
Q psy6572 451 FVNECNVSHGGQLCAH-ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL--DRPCS-HYCRNTLGSYSCSCAPGYALL 526 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~-~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~--~~~Cs-q~C~nt~gsy~C~C~~Gy~L~ 526 (1416)
+|+||...+.. |.+ .|++++++|+|.|++||.+.+.+++.|++||||+ +..|. ++|+|+.|+|+|.|++||+|.
T Consensus 2 dideC~~~~~~--C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 2 DIDECRISPDL--CGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp CCCTTTTCSST--TTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred ccccccCCCCC--CCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence 46788655544 865 8999999999999999998756788999999998 34576 599999999999999999999
Q ss_pred cCCCceE
Q psy6572 527 SDKHGCK 533 (1416)
Q Consensus 527 ~dg~sC~ 533 (1416)
+++++|+
T Consensus 80 ~~~~~Ci 86 (86)
T 1lmj_A 80 PNISACI 86 (86)
T ss_dssp SSSCCCC
T ss_pred CCCCccC
Confidence 9998874
No 63
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.22 E-value=1.1e-09 Score=126.48 Aligned_cols=212 Identities=16% Similarity=0.200 Sum_probs=147.9
Q ss_pred CeEEEEe--cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee------cCCC
Q psy6572 540 PNLLFTN--KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP------ATSP 611 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~------l~~p 611 (1416)
..|||++ ...|++++.++....+......+.+|++|+. ++||+++... ..|.++..++..+++.. +..|
T Consensus 57 ~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~d-G~l~v~~~~~--~~v~~~~~~g~~~~~~~~~~~~~~~~~ 133 (305)
T 3dr2_A 57 RTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQ-QRLVHCEHGR--RAITRSDADGQAHLLVGRYAGKRLNSP 133 (305)
T ss_dssp TEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTT-SCEEEEETTT--TEEEEECTTSCEEEEECEETTEECSCC
T ss_pred CEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCC-CCEEEEECCC--CEEEEECCCCCEEEEEeccCCCccCCC
Confidence 3566665 3568888776655444445567889999985 5688887663 37888887744444432 5679
Q ss_pred ceEEEEccCCcEEEeeCC-----------------CCeEEEeecC-CCceEEEEcCCCCCcceeeecCCcceEEEeeCCC
Q psy6572 612 DGLTVDWVGRNLYWCDKG-----------------LDTIEVAKLD-GRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ 673 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~-----------------~~~I~v~~ld-G~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~ 673 (1416)
.+|++|+ .++||+||.. ...|++++.+ |.... +. .+..|++|+++|...+|||++...
T Consensus 134 ~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~-~~--~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 134 NDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR-MA--DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE-EE--EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE-Ee--cCCCCcceEEcCCCCEEEEEecCC
Confidence 9999997 6789998741 2568888885 54443 33 678899999999988999999753
Q ss_pred ----CceEEEEecCCCC---CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCccccc
Q psy6572 674 ----NAHIGKAKMDGSN---PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHH 746 (1416)
Q Consensus 674 ----~~~I~ra~mDGs~---r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~ 746 (1416)
..+|.+.++++.. ++++.......|.||++|. .++||++. .+.|.+++.+|.....+... ..
T Consensus 210 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~--~~gv~~~~~~g~~~~~~~~~--------~~ 278 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSS--GTGVCVFDSDGQLLGHIPTP--------GT 278 (305)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECC--SSEEEEECTTSCEEEEEECS--------SC
T ss_pred cCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEec--CCcEEEECCCCCEEEEEECC--------Cc
Confidence 2489999887643 3344444456799999996 67788877 45699999988866655432 14
Q ss_pred ceeEEE--ecCcEEEeecCCCeeEEec
Q psy6572 747 VFALAV--FEDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 747 P~~lav--~~d~LYwtD~~~~~I~~~n 771 (1416)
|..+++ .+++||++.. +.|++++
T Consensus 279 ~~~~~f~~d~~~L~it~~--~~l~~~~ 303 (305)
T 3dr2_A 279 ASNCTFDQAQQRLFITGG--PCLWMLP 303 (305)
T ss_dssp CCEEEECTTSCEEEEEET--TEEEEEE
T ss_pred eeEEEEeCCCCEEEEEcC--CeEEEEE
Confidence 667776 3456887764 4566553
No 64
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.22 E-value=2.5e-12 Score=117.39 Aligned_cols=71 Identities=27% Similarity=0.451 Sum_probs=60.6
Q ss_pred ccCCCCCCCceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCcccccccCCeeecCC--CceeccccccCC
Q psy6572 244 CAHSECNLFEFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETCMEGYFKCLN--GRCLLENYYCDG 314 (1416)
Q Consensus 244 c~~~~C~~~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C~~~~f~C~~--g~CI~~~~~CDg 314 (1416)
|...+|.+++|+|.++++|||..|+|||+.||.|||||....+|....+|.+.+|+|.+ ++||+..++...
T Consensus 4 C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gLr 76 (80)
T 2kny_A 4 LEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRKLR 76 (80)
T ss_dssp CSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTTTS
T ss_pred CCCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHHHH
Confidence 66778999999996579999999999999999999999644468655789999999998 789998776543
No 65
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.6e-10 Score=132.99 Aligned_cols=195 Identities=15% Similarity=0.166 Sum_probs=138.6
Q ss_pred ccccceeeeeecCCCeEEEeeccC---CCccEEEEecC-CCCeEEee--------cCCCceEEEEccCCcEEEeeC---C
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTM---HGSSIRRSCNN-SQPELLFP--------ATSPDGLTVDWVGRNLYWCDK---G 629 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~---~~~~I~r~~l~-s~~~~l~~--------l~~p~gLAvD~~~~~LYwtD~---~ 629 (1416)
.+..|.+|++|.. ++|||+|... ...+|.++++. ......+. ...|.+||||+..+.+|++|. .
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 4578999999986 7899999762 01379998887 33221112 235799999998899999999 7
Q ss_pred CCeEEEeecC-CCceEEEEc-------------CC---------------CCCcceeeecCCcceEEEeeCCCCceEEEE
Q psy6572 630 LDTIEVAKLD-GRFRKVLIN-------------KG---------------LQEPRGIALNPAYGYMYWTDWGQNAHIGKA 680 (1416)
Q Consensus 630 ~~~I~v~~ld-G~~~~vLi~-------------~~---------------l~~P~gIavDp~~g~LYWtD~g~~~~I~ra 680 (1416)
.+.|.+.++. |+..+++.. .+ ...|.|||++|..++||+++.... +|+++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~ 222 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRI 222 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEE
Confidence 8899999986 444443311 00 124799999999889999997544 88888
Q ss_pred ecC----CCC--C----EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCccccccee
Q psy6572 681 KMD----GSN--P----KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFA 749 (1416)
Q Consensus 681 ~mD----Gs~--r----~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~ 749 (1416)
+.+ +.. + .+........|.||++|. +++||++++..+.|.+++. +|+ ..+++... .+.+|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~-----~~~~p~~ 295 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRA-YKLLVTDE-----KLSWTDS 295 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTE-EEEEEECG-----GGSCEEE
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCC-EEEEEECC-----ceecCCe
Confidence 753 221 0 001112245799999996 6899999999999999999 775 34444321 2778999
Q ss_pred EEEe-cCcEEEeecCCCeeE
Q psy6572 750 LAVF-EDHLFWTDWEMKSIE 768 (1416)
Q Consensus 750 lav~-~d~LYwtD~~~~~I~ 768 (1416)
|++. +++||+++...+++.
T Consensus 296 va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 296 FNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp EEECTTSCEEEEECCGGGSG
T ss_pred eEECCCCcEEEEeCcccccc
Confidence 9994 678999998766553
No 66
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=6.5e-10 Score=130.72 Aligned_cols=219 Identities=9% Similarity=0.044 Sum_probs=144.6
Q ss_pred ccceeeeeecCCCeEEEeeccCCC--ccEEEEecCCCCeEE-------ee-cCCCceEEEEccCCcEEEeeCC-----CC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHG--SSIRRSCNNSQPELL-------FP-ATSPDGLTVDWVGRNLYWCDKG-----LD 631 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~--~~I~r~~l~s~~~~l-------~~-l~~p~gLAvD~~~~~LYwtD~~-----~~ 631 (1416)
..|.+|++++ +++||++...... .+|.++. +.....+ .. +..|.+|++|.. ++|||+|.+ ..
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCC
Confidence 5788999986 4678888542111 2566665 3211100 01 678999999976 789999987 57
Q ss_pred eEEEeecC-CCceEEEEcC-----CCCCcceeeecCCcceEEEeeCC--CCceEEEEecCCCCCEEEeec----------
Q psy6572 632 TIEVAKLD-GRFRKVLINK-----GLQEPRGIALNPAYGYMYWTDWG--QNAHIGKAKMDGSNPKVIISK---------- 693 (1416)
Q Consensus 632 ~I~v~~ld-G~~~~vLi~~-----~l~~P~gIavDp~~g~LYWtD~g--~~~~I~ra~mDGs~r~vlv~~---------- 693 (1416)
+|.+.++. |+..+++... ....|++||||+..|++|++|.+ ....|.+.+++......++..
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 99999987 5434444321 12468999999998999999972 234788888763322222211
Q ss_pred ----C---------------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCC----CC--ceEE----EEeccCCCCccc
Q psy6572 694 ----N---------------LSWPNALTISYETNELFWGDAHEDYIAVSDLN----GE--NIKI----IVSRRMDPTINL 744 (1416)
Q Consensus 694 ----~---------------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld----G~--~r~~----v~~~~~~p~~~l 744 (1416)
+ ...|+||++++..+.||+++....+|++++.+ +. ..++ ...+. .
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~------~ 247 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE------K 247 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE------C
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc------C
Confidence 0 13479999998778999999988899999742 21 1100 00111 3
Q ss_pred ccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEEEeC-CCCCCeeeeee
Q psy6572 745 HHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSVVKN-LVHKPMDLRVY 795 (1416)
Q Consensus 745 ~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~-~~~~p~~I~v~ 795 (1416)
..|.+|++. ++.||++++..++|.+++..+|+. .+++.. .+..|.+|++-
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~ 299 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFG 299 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEEC
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEEC
Confidence 478999995 689999999999999998645653 333322 25667777764
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=8.1e-10 Score=127.01 Aligned_cols=209 Identities=10% Similarity=0.052 Sum_probs=146.7
Q ss_pred CCeEEEEe--cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cC
Q psy6572 539 PPNLLFTN--KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------AT 609 (1416)
Q Consensus 539 ~~~li~s~--~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~ 609 (1416)
...|+|++ ...|+++++.+...........+.+|++++.++ ||++. . ..|+++.++ ...+.+.. ..
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~---~~l~~~d~~~g~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G---TKFCALNWKEQSAVVLATVDNDKKNN 98 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T---TEEEEEETTTTEEEEEEECCTTCSSE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C---CeEEEEECCCCcEEEEEecCCCCCCC
Confidence 45677765 457888888765522233335678899987665 66654 2 378888887 44444443 23
Q ss_pred CCceEEEEccCCcEEEeeCC-----------CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEE
Q psy6572 610 SPDGLTVDWVGRNLYWCDKG-----------LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIG 678 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~-----------~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ 678 (1416)
.|.+|++|+. ++||+++.. .+.|++++.+|....+ ...+..|+||+++|...+|||++... .+|.
T Consensus 99 ~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--~~~~~~pngi~~spdg~~lyv~~~~~-~~i~ 174 (297)
T 3g4e_A 99 RFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY--FDQVDISNGLDWSLDHKIFYYIDSLS-YSVD 174 (297)
T ss_dssp EEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE--EEEESBEEEEEECTTSCEEEEEEGGG-TEEE
T ss_pred CCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEEEE--eeccccccceEEcCCCCEEEEecCCC-CcEE
Confidence 5788999984 569998743 3478888887765443 34677899999999988999999654 4899
Q ss_pred EEecC---CC--CCEEEeec--CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEEEeccCCCCcccccceeE
Q psy6572 679 KAKMD---GS--NPKVIISK--NLSWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKIIVSRRMDPTINLHHVFAL 750 (1416)
Q Consensus 679 ra~mD---Gs--~r~vlv~~--~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v~~~~~~p~~~l~~P~~l 750 (1416)
+.+++ |. +++++... ....|.||++|. +++||++.+..+.|.+++.+ |.....+.. . ...|.++
T Consensus 175 ~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~-p------~~~~t~~ 246 (297)
T 3g4e_A 175 AFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKL-P------VDKTTSC 246 (297)
T ss_dssp EEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEEC-S------SSBEEEE
T ss_pred EEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEEC-C------CCCceEE
Confidence 99875 32 12344432 246799999996 67999999988999999997 765555532 1 4578888
Q ss_pred EEec---CcEEEeecCC
Q psy6572 751 AVFE---DHLFWTDWEM 764 (1416)
Q Consensus 751 av~~---d~LYwtD~~~ 764 (1416)
++.+ ++||+|....
T Consensus 247 ~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 247 CFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEESGGGCEEEEEEBCT
T ss_pred EEeCCCCCEEEEEcCCc
Confidence 8853 5899998654
No 68
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.20 E-value=1.1e-09 Score=129.89 Aligned_cols=213 Identities=14% Similarity=0.156 Sum_probs=145.1
Q ss_pred eEEEEec-EEEEEEecCCcceEE------ecccccceeeeeecC---CCeEEEeecc-CCC----ccEEEEecCCC----
Q psy6572 541 NLLFTNK-YYIREVTQAGVMTIR------IHNQTNAVGLDFDWV---DNCLYWSDVT-MHG----SSIRRSCNNSQ---- 601 (1416)
Q Consensus 541 ~li~s~~-~~I~~i~l~g~~~~~------~~~l~~~~~l~~D~~---~~~LYwtD~~-~~~----~~I~r~~l~s~---- 601 (1416)
.|+++.+ ..|++++.+|. +.+ ..+...+.+|++++. ++.||+++.. ... .+|.|+.++..
T Consensus 41 ~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~ 119 (354)
T 3a9g_A 41 RYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKL 119 (354)
T ss_dssp EEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCE
T ss_pred eEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCc
Confidence 3555553 46777765554 222 234567899999987 8999999863 111 37888887722
Q ss_pred --CeEEee------cCCCceEEEEccCCcEEEeeCC-------------CCeEEEeecCCCc-------eEEEEcCCCCC
Q psy6572 602 --PELLFP------ATSPDGLTVDWVGRNLYWCDKG-------------LDTIEVAKLDGRF-------RKVLINKGLQE 653 (1416)
Q Consensus 602 --~~~l~~------l~~p~gLAvD~~~~~LYwtD~~-------------~~~I~v~~ldG~~-------~~vLi~~~l~~ 653 (1416)
.++|+. ...+.+|++++ .++||++... .++|.+++.+|+. ...++..++..
T Consensus 120 ~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn 198 (354)
T 3a9g_A 120 KEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN 198 (354)
T ss_dssp EEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC
T ss_pred CccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC
Confidence 344433 34688999998 5689999642 3589999999972 12344578999
Q ss_pred cceeeecCCcceEEEeeCCCC--ceEEEEecCCCC---------------CEEEee--cCCCCCeeEEe-------ecCC
Q psy6572 654 PRGIALNPAYGYMYWTDWGQN--AHIGKAKMDGSN---------------PKVIIS--KNLSWPNALTI-------SYET 707 (1416)
Q Consensus 654 P~gIavDp~~g~LYWtD~g~~--~~I~ra~mDGs~---------------r~vlv~--~~l~~P~gLai-------D~~~ 707 (1416)
|.||++||..|.||++|.+.. ..|.++.. |.+ ...++. .....|.||++ + ..
T Consensus 199 p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~~ 276 (354)
T 3a9g_A 199 PQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-LR 276 (354)
T ss_dssp CCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-GT
T ss_pred cceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-cC
Confidence 999999998899999997654 24555432 221 011111 12346899999 4 47
Q ss_pred CeEEEecCCCCeEEEEeCCCCce----EEEEeccCCCCcccccceeEEEe-cCcEEEeecC
Q psy6572 708 NELFWGDAHEDYIAVSDLNGENI----KIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWE 763 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ldG~~r----~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~ 763 (1416)
+.||+++...++|.++.+++... ..++... ...|.+|++. ++.||++++.
T Consensus 277 G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------~~rp~~v~~~pDG~lyv~~~~ 331 (354)
T 3a9g_A 277 GWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV------FGRLRDVVIDDDGGILISTSN 331 (354)
T ss_dssp TEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT------SCCEEEEEECTTSCEEEEECT
T ss_pred CcEEEEEcCCCEEEEEEECCCCcccceeeeccCC------CCCeeEEEECCCCcEEEEEeC
Confidence 89999999999999999885431 2232221 5679999985 5799999974
No 69
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.19 E-value=3.9e-09 Score=120.59 Aligned_cols=213 Identities=13% Similarity=0.156 Sum_probs=149.6
Q ss_pred eEEEEe--cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cCCC
Q psy6572 541 NLLFTN--KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------ATSP 611 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~~p 611 (1416)
.|+|+. ...|+++++.+....+......+.+|++++ .++||+++... ..|+++.+. +..+.+.. +..|
T Consensus 41 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 117 (296)
T 3e5z_A 41 AVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNK-QGHLIACSHGL--RRLERQREPGGEWESIADSFEGKKLNSP 117 (296)
T ss_dssp EEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECT-TCCEEEEETTT--TEEEEECSTTCCEEEEECEETTEECCCC
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECC-CCcEEEEecCC--CeEEEEcCCCCcEEEEeeccCCCCCCCC
Confidence 355554 457888888766433334456688999988 45688888763 379998885 44444432 5678
Q ss_pred ceEEEEccCCcEEEeeCC-----------------CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCC
Q psy6572 612 DGLTVDWVGRNLYWCDKG-----------------LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQN 674 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~-----------------~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~ 674 (1416)
.+|++|+ .++||++|.. .+.|++++.+|..+. + ...+..|.+|+++|....| |++...
T Consensus 118 ~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~-~-~~~~~~~~gi~~s~dg~~l-v~~~~~- 192 (296)
T 3e5z_A 118 NDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSA-P-IRDRVKPNGLAFLPSGNLL-VSDTGD- 192 (296)
T ss_dssp CCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEE-E-ECCCSSEEEEEECTTSCEE-EEETTT-
T ss_pred CCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEE-e-ecCCCCCccEEECCCCCEE-EEeCCC-
Confidence 9999997 6689998751 358888888865433 3 3677889999999997777 998654
Q ss_pred ceEEEEecC--CCC---CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCccccccee
Q psy6572 675 AHIGKAKMD--GSN---PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFA 749 (1416)
Q Consensus 675 ~~I~ra~mD--Gs~---r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~ 749 (1416)
.+|.+.+++ |+. ++++ ......|.+|++|. +++||++. .+.|.+++.+|.....+... .. |.+
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~g~~~~~~~~~-------~~-~~~ 260 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPDGDELGRVLTP-------QT-TSN 260 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTTSCEEEEEECS-------SC-CCE
T ss_pred CeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCCCCEEEEEECC-------CC-cee
Confidence 489998886 332 2344 44567899999996 67899988 68899999998766655432 23 777
Q ss_pred EEEec---CcEEEeecCCCeeEEecccCC
Q psy6572 750 LAVFE---DHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 750 lav~~---d~LYwtD~~~~~I~~~nk~tG 775 (1416)
+++.+ ++||++.. +.|++++..+.
T Consensus 261 ~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp EEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred EEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 87742 36888764 47888765443
No 70
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.18 E-value=7.6e-10 Score=131.03 Aligned_cols=212 Identities=16% Similarity=0.187 Sum_probs=143.5
Q ss_pred EEEEec-EEEEEEecCCcceEE------ecccccceeeeeecC---CCeEEEeeccCCC---ccEEEEecC-C---CCeE
Q psy6572 542 LLFTNK-YYIREVTQAGVMTIR------IHNQTNAVGLDFDWV---DNCLYWSDVTMHG---SSIRRSCNN-S---QPEL 604 (1416)
Q Consensus 542 li~s~~-~~I~~i~l~g~~~~~------~~~l~~~~~l~~D~~---~~~LYwtD~~~~~---~~I~r~~l~-s---~~~~ 604 (1416)
|+++.. ..|+++. ++..+.+ ..++..+.+|++++. ++.||+++..... .+|.|+.++ . ..++
T Consensus 44 l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~ 122 (352)
T 2ism_A 44 MLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRV 122 (352)
T ss_dssp EEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEE
T ss_pred EEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEE
Confidence 555553 4677777 5543211 234567899999987 7899999875311 478888877 2 2334
Q ss_pred Eee--------cCCCceEEEEccCCcEEEeeCC-------------CCeEEEeecCCCc------------eEEEEcCCC
Q psy6572 605 LFP--------ATSPDGLTVDWVGRNLYWCDKG-------------LDTIEVAKLDGRF------------RKVLINKGL 651 (1416)
Q Consensus 605 l~~--------l~~p~gLAvD~~~~~LYwtD~~-------------~~~I~v~~ldG~~------------~~vLi~~~l 651 (1416)
|+. ...|.+|++++ .++||++... .++|.+++.+|+. ...++..++
T Consensus 123 l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~ 201 (352)
T 2ism_A 123 VLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH 201 (352)
T ss_dssp EEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC
T ss_pred EEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC
Confidence 433 23678999998 4599999742 3689999999831 222344678
Q ss_pred CCcceeeecCCcceEEEeeCCCCc-------eEEEEecCCC---------------CCEEEeecCCCCCeeEEeecCCCe
Q psy6572 652 QEPRGIALNPAYGYMYWTDWGQNA-------HIGKAKMDGS---------------NPKVIISKNLSWPNALTISYETNE 709 (1416)
Q Consensus 652 ~~P~gIavDp~~g~LYWtD~g~~~-------~I~ra~mDGs---------------~r~vlv~~~l~~P~gLaiD~~~~r 709 (1416)
..|.|||+||..|.||++|.+... .|.++.-.+. ...++.......|.||++ ..+.
T Consensus 202 rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~--~~G~ 279 (352)
T 2ism_A 202 RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF--FRGD 279 (352)
T ss_dssp SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE--ETTE
T ss_pred CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE--ECCE
Confidence 899999999988999999977553 3555543220 001111122346889999 4789
Q ss_pred EEEecCCCCeEEEEeCCCCce-------EEEEeccCCCCcccccceeEEEe-cCcEEEeecCC
Q psy6572 710 LFWGDAHEDYIAVSDLNGENI-------KIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEM 764 (1416)
Q Consensus 710 LYWtD~~~~~I~~~~ldG~~r-------~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~ 764 (1416)
||+++...++|.++.+++... ..++. . +..|.+|++. .+.||++++..
T Consensus 280 l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~------~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 280 LYVAGLRGQALLRLVLEGERGRWRVLRVETALS-G------FGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-S------SCCEEEEEECTTSCEEEEECST
T ss_pred EEEEECCCCEEEEEEECCCCcceeecchheecc-c------CCCeeEEEECCCCcEEEEEeCC
Confidence 999999999999999875442 22332 2 5689999995 67999999864
No 71
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.16 E-value=7.9e-12 Score=117.11 Aligned_cols=82 Identities=29% Similarity=0.803 Sum_probs=71.7
Q ss_pred ccccccCCCCCCcc-cccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeecC--CCCcEEec
Q psy6572 451 FVNECNVSHGGQLC-AHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSC--APGYALLS 527 (1416)
Q Consensus 451 ~i~eC~~~~~~~~C-s~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C--~~Gy~L~~ 527 (1416)
+|+||...+.. | .+.|++++++|+|.|++||.+. .+++.|++|+||..++|.+.|+|++|+|+|.| .+||.|..
T Consensus 2 dideC~~~~~~--C~~~~C~n~~g~y~C~C~~G~~~~-~~g~~C~dideC~~~~C~~~C~n~~g~y~C~C~g~~G~~~~~ 78 (87)
T 1z6c_A 2 DVDECSLKPSI--CGTAVCKNIPGDFECECPEGYRYN-LKSKSCEDIDECSENMCAQLCVNYPGGYTCYCDGKKGFKLAQ 78 (87)
T ss_dssp CSCSSSSSSSS--BTTSSCCCBTTBCCCSSSTTCEEE-TTTTEEECCCHHHHSCCSSEECCCSSSCCEECCSSSCCBCCT
T ss_pred ccccccCCCCC--CCCCEeECCCCCEEEECCCCceEC-CCCCcCCCcCeeCCCCCCCEEEccCCCEEEECCCCcCCcccC
Confidence 36778655544 7 4589999999999999999997 67889999999997899999999999999999 69999999
Q ss_pred CCCceEec
Q psy6572 528 DKHGCKAT 535 (1416)
Q Consensus 528 dg~sC~a~ 535 (1416)
++++|+++
T Consensus 79 ~~~~C~di 86 (87)
T 1z6c_A 79 DQKSCEVV 86 (87)
T ss_dssp TSSSCBCC
T ss_pred CCCcceEC
Confidence 99999765
No 72
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.16 E-value=4.3e-10 Score=133.22 Aligned_cols=211 Identities=12% Similarity=0.112 Sum_probs=143.1
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEe-------e-cCCCceEEEEcc---CCcEEEee
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLF-------P-ATSPDGLTVDWV---GRNLYWCD 627 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~-------~-l~~p~gLAvD~~---~~~LYwtD 627 (1416)
++++.++..|.+|++++..+.||+++.. ++|+++..++.. +++. . ...|.+||+++. ++.||+++
T Consensus 11 ~~va~~l~~P~~i~~~pdG~~l~V~e~~---G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 11 EVLQDKLDHPWALAFLPDNHGMLITLRG---GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEESSEEEEEECSTTCCEEEEETT---TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEECCCCCcEEEEEcCCCCEEEEEeCC---ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 4566678899999999865549999875 478888765221 1111 1 346789999986 89999998
Q ss_pred CC-------CCeEEEeecCCC-----ceEEEEcC------CCCCcceeeecCCcceEEEeeCCC------------CceE
Q psy6572 628 KG-------LDTIEVAKLDGR-----FRKVLINK------GLQEPRGIALNPAYGYMYWTDWGQ------------NAHI 677 (1416)
Q Consensus 628 ~~-------~~~I~v~~ldG~-----~~~vLi~~------~l~~P~gIavDp~~g~LYWtD~g~------------~~~I 677 (1416)
.. ..+|.++++++. ..++|+.. ....|.+|+++|. |+||++.... ..+|
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSS-SEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCC-CcEEEEECCCCCCCccCCCCCCCeEE
Confidence 65 457888888653 24455431 2355899999996 7999996321 2489
Q ss_pred EEEecCCCC------------CEEEeecCCCCCeeEEeecCCCeEEEecCCCC---eEEEEeCCCCceE-----------
Q psy6572 678 GKAKMDGSN------------PKVIISKNLSWPNALTISYETNELFWGDAHED---YIAVSDLNGENIK----------- 731 (1416)
Q Consensus 678 ~ra~mDGs~------------r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~---~I~~~~ldG~~r~----------- 731 (1416)
.|++.||+. +..++...+..|.||++|+.+++||++|...+ .|.++.. |.+.-
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~ 245 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYS 245 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTT
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCC
Confidence 999999972 34455668999999999988999999998654 3333321 22100
Q ss_pred --EE-------EeccCCCCcc---cccceeEEEe--------cCcEEEeecCCCeeEEecccCC
Q psy6572 732 --II-------VSRRMDPTIN---LHHVFALAVF--------EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 732 --~v-------~~~~~~p~~~---l~~P~~lav~--------~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
.+ ......|... ...|.+|+++ .+.||++++..++|.++....+
T Consensus 246 ~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 246 GFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp SSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred CCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 00 0000011100 1358899996 4789999999999999976544
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.13 E-value=1.5e-08 Score=117.51 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=151.2
Q ss_pred ccceeeeeecCCCeEEEeeccCC----CccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMH----GSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~----~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+.+++|++.+++||++..... ...|+++++. ......+. ...|.+|++++.++.||+++...+.|.+.++..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 45788999999999999986521 2378888777 33222223 567999999999999999999989999999865
Q ss_pred Cc-eEEEEcCCCC--------CcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEE
Q psy6572 641 RF-RKVLINKGLQ--------EPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELF 711 (1416)
Q Consensus 641 ~~-~~vLi~~~l~--------~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLY 711 (1416)
.. ...+...... .|++|+++|..++||+++++....|.+.++........+......|.+|++++..++||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLY 200 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEE
Confidence 44 3444332222 28999999999999999976666899988865443333332345699999999888899
Q ss_pred EecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCCCceEEEE
Q psy6572 712 WGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 712 WtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG~~~~~l~ 782 (1416)
+++. .+.|..+++........+.... ......|.+|++. +++||+++...+.|..++..+++....+.
T Consensus 201 ~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 201 TTNA-DGELITIDTADNKILSRKKLLD--DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EECT-TSEEEEEETTTTEEEEEEECCC--SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EEcC-CCeEEEEECCCCeEEEEEEcCC--CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9876 6788888875544333332210 0013356778875 56799999988999999887776555443
No 74
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.13 E-value=5.1e-09 Score=121.41 Aligned_cols=208 Identities=17% Similarity=0.199 Sum_probs=147.1
Q ss_pred ecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEe-e-cCCCceEEEEccCCcEEEeeCCC----CeEEE
Q psy6572 563 IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLF-P-ATSPDGLTVDWVGRNLYWCDKGL----DTIEV 635 (1416)
Q Consensus 563 ~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~-~-l~~p~gLAvD~~~~~LYwtD~~~----~~I~v 635 (1416)
......+.+++|+. .++|||++... ..|+++.+. .....+. . ...|.+|++|+. ++||++.... +.|.+
T Consensus 41 ~~~~~~~~~~~~~~-~g~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 41 SKKGLQLEGLNFDR-QGQLFLLDVFE--GNIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp ESSCCCEEEEEECT-TSCEEEEETTT--CEEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEE
T ss_pred eccCccccCcEECC-CCCEEEEECCC--CEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEE
Confidence 33455678899986 45699998774 389998887 4444433 2 567899999965 6789988766 68999
Q ss_pred eecCCCceEEEEc--CCCCCcceeeecCCcceEEEeeCCC-----CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCC
Q psy6572 636 AKLDGRFRKVLIN--KGLQEPRGIALNPAYGYMYWTDWGQ-----NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETN 708 (1416)
Q Consensus 636 ~~ldG~~~~vLi~--~~l~~P~gIavDp~~g~LYWtD~g~-----~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~ 708 (1416)
.++++...+.++. .....|.+|++||. |.||+++... ...|++++.++...+.+. ..+..|++|++++..+
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCC
Confidence 9998876654443 23457999999996 7899988642 357899888765544443 3466799999998667
Q ss_pred eEEEecCCCCeEEEEeC--CCCceEEE----EeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 709 ELFWGDAHEDYIAVSDL--NGENIKII----VSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 709 rLYWtD~~~~~I~~~~l--dG~~r~~v----~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
+||+++...+.|.++++ +|.....+ .... .....|.+|++. ++.||++.+..+.|.+++. +|.....+
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~----~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF----TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC----CSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEec----CCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 89999988889999998 45443322 1110 002468899985 5789999988889999876 45443333
No 75
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.13 E-value=3.8e-09 Score=123.97 Aligned_cols=229 Identities=14% Similarity=0.056 Sum_probs=154.9
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--------cCCCceEEEEc---cCCcEEEee
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--------ATSPDGLTVDW---VGRNLYWCD 627 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--------l~~p~gLAvD~---~~~~LYwtD 627 (1416)
+++..++..|.+|+|.+. +.||+++... ++|+++..+ ...+.+.. ...+.|||+++ .++.||++.
T Consensus 25 ~~va~gL~~P~~ia~~pd-G~llVter~~--G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG-GDLLVSSRDE--ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETTT--CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred EEeecCCCCceEEEEcCC-CcEEEEEecC--CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 467788999999999875 5799998743 489988765 33333321 45688999998 478999865
Q ss_pred C--CCCeEEEeecCCC--------ceEEEEc----CCCCCcceeeecCCcceEEEeeC--C----------CCceEEEEe
Q psy6572 628 K--GLDTIEVAKLDGR--------FRKVLIN----KGLQEPRGIALNPAYGYMYWTDW--G----------QNAHIGKAK 681 (1416)
Q Consensus 628 ~--~~~~I~v~~ldG~--------~~~vLi~----~~l~~P~gIavDp~~g~LYWtD~--g----------~~~~I~ra~ 681 (1416)
. ..++|.++.+++. ..++|+. .....+..|+++|. |+||++.- + ...+|.|++
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 3 4568999998762 2344443 23456788999996 79999941 1 236899999
Q ss_pred cCCC--------CCEEEeecCCCCCeeEEeecCCCeEEEecCCCC---eEEEEeCCCCceEE-EE------eccCCCCcc
Q psy6572 682 MDGS--------NPKVIISKNLSWPNALTISYETNELFWGDAHED---YIAVSDLNGENIKI-IV------SRRMDPTIN 743 (1416)
Q Consensus 682 mDGs--------~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~---~I~~~~ldG~~r~~-v~------~~~~~p~~~ 743 (1416)
.||+ .. .++..++..|.||++|+ .++||++|...+ .|.++. .|.+.-- .. ....+|...
T Consensus 181 ~dG~ip~~nPf~~~-~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 181 PDGEPAPGNPFPGS-PVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp TTSSBCTTCSSTTC-CEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred CCCCccCCCCCCCC-eEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEe
Confidence 9998 33 46667899999999998 799999997654 344432 2322100 00 000011111
Q ss_pred c----ccceeEEEecCcEEEeecCCCeeEEecccCCC---ceEEEEeCCCCCCeeeeee
Q psy6572 744 L----HHVFALAVFEDHLFWTDWEMKSIERCDKYTGK---NCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 744 l----~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~---~~~~l~~~~~~~p~~I~v~ 795 (1416)
+ ..|.+|+++.+.||.+.....+|.++....+. ....++.....+|.+|++-
T Consensus 258 ~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~ 316 (347)
T 3das_A 258 WSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPA 316 (347)
T ss_dssp ECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEE
T ss_pred cCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEEC
Confidence 1 36889999999999999999999998654332 1233442344567777764
No 76
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.12 E-value=6e-09 Score=119.32 Aligned_cols=211 Identities=16% Similarity=0.111 Sum_probs=147.5
Q ss_pred cEEEEEEecCCcc-eEEec-----ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEE-ee------cCCCce
Q psy6572 547 KYYIREVTQAGVM-TIRIH-----NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELL-FP------ATSPDG 613 (1416)
Q Consensus 547 ~~~I~~i~l~g~~-~~~~~-----~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l-~~------l~~p~g 613 (1416)
...|+++++.... ..+.. ....+.+|++++..++||+++... .|+++.++...+.+ .. ...|.+
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~---~l~~~d~~g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL---GLLVVQTDGTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT---EEEEEETTSCEEECCSBCTTSCBCBCCCE
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC---CEEEEeCCCCEEEEEeccCCCccccCCcC
Confidence 4568888764433 22222 235688999998768899988752 68888776333333 22 346899
Q ss_pred EEEEccCCcEEEeeCCC---------------CeEEEeecCCCceEEEEcCCCCCcceeeec----CCcceEEEeeCCCC
Q psy6572 614 LTVDWVGRNLYWCDKGL---------------DTIEVAKLDGRFRKVLINKGLQEPRGIALN----PAYGYMYWTDWGQN 674 (1416)
Q Consensus 614 LAvD~~~~~LYwtD~~~---------------~~I~v~~ldG~~~~vLi~~~l~~P~gIavD----p~~g~LYWtD~g~~ 674 (1416)
|++|+ .++||+++... +.|.+.+.+|....++ ..+..|.+|+++ +..++|||++...
T Consensus 122 i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~--~~~~~~~~i~~~~~~d~dg~~l~v~~~~~- 197 (314)
T 1pjx_A 122 CAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD--TAFQFPNGIAVRHMNDGRPYQLIVAETPT- 197 (314)
T ss_dssp EEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE--EEESSEEEEEEEECTTSCEEEEEEEETTT-
T ss_pred EEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec--cCCCCcceEEEecccCCCCCEEEEEECCC-
Confidence 99997 56899998764 5788888886544332 345679999999 8877999999654
Q ss_pred ceEEEEecCCCCC----EEEee--cCC-CCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEEEeccCCCCccccc
Q psy6572 675 AHIGKAKMDGSNP----KVIIS--KNL-SWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKIIVSRRMDPTINLHH 746 (1416)
Q Consensus 675 ~~I~ra~mDGs~r----~vlv~--~~l-~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v~~~~~~p~~~l~~ 746 (1416)
.+|.+.++++... .++.. ... ..|.+|++|. .++||+++...+.|.+++.+ |.....+.. . ...
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~------~~~ 269 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRC-P------FEK 269 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEEC-S------SSC
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-C------CCC
Confidence 4788888763221 12222 112 6799999996 78999999888899999988 665554432 1 467
Q ss_pred ceeEEEe-cC-cEEEeecCCCeeEEecc
Q psy6572 747 VFALAVF-ED-HLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 747 P~~lav~-~d-~LYwtD~~~~~I~~~nk 772 (1416)
|.+|++. .+ +||+++...+.|.+++.
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred ceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 8899984 34 49999988888888764
No 77
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.12 E-value=2.2e-09 Score=125.52 Aligned_cols=196 Identities=13% Similarity=0.078 Sum_probs=138.9
Q ss_pred eEEEEe--cEEEEEEecCCcc-eEEecccc------cceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cC
Q psy6572 541 NLLFTN--KYYIREVTQAGVM-TIRIHNQT------NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-AT 609 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~-~~~~~~l~------~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~ 609 (1416)
.|++++ ...|..+++.... ...+.... .|.+|++ .+++||+++... ...|.++++.+ .....+. ..
T Consensus 96 ~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~-~~~v~viD~~t~~~~~~i~~g~ 172 (328)
T 3dsm_A 96 KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSY-QNRILKIDTETDKVVDELTIGI 172 (328)
T ss_dssp EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTT-CCEEEEEETTTTEEEEEEECSS
T ss_pred eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCC-CCEEEEEECCCCeEEEEEEcCC
Confidence 677776 5678888876654 21222222 6888888 588999998731 23888888873 2222222 56
Q ss_pred CCceEEEEccCCcEEEeeCCC----------CeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEE
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGL----------DTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIG 678 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~----------~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ 678 (1416)
.|.+|++|+ .++||++..+. +.|.++++.... ...+.......|++|+++|..++||+++. .|.
T Consensus 173 ~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~ 247 (328)
T 3dsm_A 173 QPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----DIW 247 (328)
T ss_dssp CBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----SEE
T ss_pred CccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----EEE
Confidence 799999997 46799998875 789999987443 33343233458999999999999999984 688
Q ss_pred EEecCCCCCE--EEeecCCCCCeeEEeecCCCeEEEec----CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEE
Q psy6572 679 KAKMDGSNPK--VIISKNLSWPNALTISYETNELFWGD----AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAV 752 (1416)
Q Consensus 679 ra~mDGs~r~--vlv~~~l~~P~gLaiD~~~~rLYWtD----~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav 752 (1416)
+.++...... .++......|.||+||+.+++||+++ ...+.|.+++.+|+..+.+..+ ..|.+|++
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G--------~~P~~~~~ 319 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVG--------IIPGAFCW 319 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEE--------ESEEEEEE
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEec--------cCcceEEE
Confidence 8887644321 12222257899999998899999999 6788999999998877777554 35666665
No 78
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.10 E-value=1.3e-08 Score=114.48 Aligned_cols=203 Identities=14% Similarity=0.101 Sum_probs=140.3
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe-EEe-e-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE-LLF-P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~-~l~-~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
.++.||+|++.+++||.+.... ..|+++.+...+. .+. . ...++|||++ ..+.+|+++.+.++|.++.++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~--~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKP--AAIVEMTTNGDLIRTIPLDFVKDLETIEYI-GDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETT--EEEEEEETTCCEEEEEECSSCSSEEEEEEC-STTEEEEEETTTTEEEEEEECTTCC
T ss_pred cCcceeEEeCCCCEEEEEECCC--CeEEEEeCCCCEEEEEecCCCCChHHeEEe-CCCEEEEEECCCCcEEEEEcCCCCe
Confidence 5789999999999999865553 4899988873322 221 1 5689999998 4556778888889999988764432
Q ss_pred -EEE--EcCCC-CCc-----ceeeecCCcceEEEeeCCCCceEEEEe--cCCCCCEEEee------cCCCCCeeEEeecC
Q psy6572 644 -KVL--INKGL-QEP-----RGIALNPAYGYMYWTDWGQNAHIGKAK--MDGSNPKVIIS------KNLSWPNALTISYE 706 (1416)
Q Consensus 644 -~vL--i~~~l-~~P-----~gIavDp~~g~LYWtD~g~~~~I~ra~--mDGs~r~vlv~------~~l~~P~gLaiD~~ 706 (1416)
.++ +...+ ..| .|||+||..++||.+.-.....|++.+ +.+...+++-. ..+..+.+|++|+.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 111 11122 335 899999999999998744433777776 12222333311 23667899999999
Q ss_pred CCeEEEecCCCCeEEEEeCCCCceEEEEeccCCC--CcccccceeEEEe-cCcEEEeecCCCeeEEeccc
Q psy6572 707 TNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDP--TINLHHVFALAVF-EDHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 707 ~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p--~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~ 773 (1416)
+++||+.....+.|..++.+|.-+..+.-..+.. ...+++|-|||+. ++.||++.-. +.+++..|.
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC-
T ss_pred CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEec
Confidence 9999999999999999999998555443221100 1136799999994 6799999654 477777654
No 79
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=1.2e-08 Score=118.98 Aligned_cols=202 Identities=12% Similarity=0.158 Sum_probs=140.8
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceE
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRK 644 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~ 644 (1416)
...+.++++++.++.|||++... ..|+++.+.+....... ...|.+|++++. ++||++. ...|.+.++++...+
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~--~~i~~~d~~~~~~~~~~~~~~v~~i~~~~d-g~l~v~~--~~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILE--RELHELHLASGRKTVHALPFMGSALAKISD-SKQLIAS--DDGLFLRDTATGVLT 122 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGG--TEEEEEETTTTEEEEEECSSCEEEEEEEET-TEEEEEE--TTEEEEEETTTCCEE
T ss_pred CCCCcCCeEeCCCCEEEEEECCC--CEEEEEECCCCcEEEEECCCcceEEEEeCC-CeEEEEE--CCCEEEEECCCCcEE
Confidence 44578899999999999999874 48999988743222223 456888999865 5676665 346999988655544
Q ss_pred EEEcC----CCCCcceeeecCCcceEEEeeCCC-----CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecC
Q psy6572 645 VLINK----GLQEPRGIALNPAYGYMYWTDWGQ-----NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDA 715 (1416)
Q Consensus 645 vLi~~----~l~~P~gIavDp~~g~LYWtD~g~-----~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~ 715 (1416)
.+... ....|++|++||. |.||+++.+. ...|++++ +|+.+ .+...+..|++|++++..++|||++.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g~~~--~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KGKVT--KLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TTEEE--EEEEEESSEEEEEECTTSCEEEEEET
T ss_pred EEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CCcEE--EeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 44432 1245889999996 6788887532 35788888 55432 23345667999999987778999999
Q ss_pred CCCeEEEEeCC---C-C--ceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 716 HEDYIAVSDLN---G-E--NIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 716 ~~~~I~~~~ld---G-~--~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
..+.|.+++++ | . +++++..... ....|.+|++. ++.||++.+..+.|.+++. +|.....+
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~----~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTG----IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTT----SSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCC----CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 88999999975 4 2 2344433110 13568899985 5789999988889999986 56544433
No 80
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.05 E-value=4.1e-11 Score=109.33 Aligned_cols=64 Identities=27% Similarity=0.501 Sum_probs=57.2
Q ss_pred cCCCCccCCCcEEec-CCeEecccccccCCCCCCCCCCCCC---C---CCCCCCceeecC--CceeCCCcccC
Q psy6572 25 YCAMRDCRPGYFKCD-NNKCILSSHTCNNINDCGDGSDEAD---C---STCGNDTFHCDM--GMCIHKALRCD 88 (1416)
Q Consensus 25 ~c~~~~c~~~~f~C~-n~~ci~~~~~Cdg~~dC~d~sDE~~---C---~~C~~~~f~C~~--g~Ci~~~~~Cd 88 (1416)
.|....|++++|+|. +++|||.+|+|||+.||.|||||.. | .+|.+.+|+|.+ ++||+..++..
T Consensus 3 ~C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gL 75 (80)
T 2kny_A 3 KLEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRKL 75 (80)
T ss_dssp SCSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTTT
T ss_pred CCCCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHHH
Confidence 577889999999998 6899999999999999999999984 6 378899999999 79999887754
No 81
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.05 E-value=5.2e-08 Score=113.54 Aligned_cols=230 Identities=14% Similarity=0.081 Sum_probs=149.3
Q ss_pred EEEEec----EEEEEEecCCcc-eEE---ecccccceeeeeecCCCeEEEeeccCCCccEEEEecC--CCCeEEee--c-
Q psy6572 542 LLFTNK----YYIREVTQAGVM-TIR---IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--SQPELLFP--A- 608 (1416)
Q Consensus 542 li~s~~----~~I~~i~l~g~~-~~~---~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s~~~~l~~--l- 608 (1416)
|+++.. ..|+.+++++.. ..+ ......|.+|+|++.++.||++.... ..|..+.++ +..+.+.. .
T Consensus 53 l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--~~v~v~~~~~~g~~~~~~~~~~~ 130 (347)
T 3hfq_A 53 LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--GTAEVMKIAADGALTLTDTVQHS 130 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT--TEEEEEEECTTSCEEEEEEEECC
T ss_pred EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--CEEEEEEeCCCCCeeecceeecC
Confidence 555543 467777775443 222 23456788999999999999998654 367777665 33333332 1
Q ss_pred ----------CCCceEEEEccCCcEEEeeCCCCeEEEeecC--CCceEE--EEcCCCCCcceeeecCCcceEEEeeCCCC
Q psy6572 609 ----------TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD--GRFRKV--LINKGLQEPRGIALNPAYGYMYWTDWGQN 674 (1416)
Q Consensus 609 ----------~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld--G~~~~v--Li~~~l~~P~gIavDp~~g~LYWtD~g~~ 674 (1416)
..|.+|++++.++ ||+++.+.++|.+.+++ |....+ +.......|++|+++|...+||+++....
T Consensus 131 ~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~ 209 (347)
T 3hfq_A 131 GHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS 209 (347)
T ss_dssp CCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC
Confidence 1366799998777 99999999999999887 332221 12233457999999999888999885543
Q ss_pred ceEEEEecCCC-CCEEEe---ecC------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCC-ceEEEEeccCCCCcc
Q psy6572 675 AHIGKAKMDGS-NPKVII---SKN------LSWPNALTISYETNELFWGDAHEDYIAVSDLNGE-NIKIIVSRRMDPTIN 743 (1416)
Q Consensus 675 ~~I~ra~mDGs-~r~vlv---~~~------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~-~r~~v~~~~~~p~~~ 743 (1416)
.|....++.. .....+ ... ...|.+|++++..++||++....+.|...+++.. ..+.+.... ..
T Consensus 210 -~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~----~~ 284 (347)
T 3hfq_A 210 -QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS----TE 284 (347)
T ss_dssp -EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE----CS
T ss_pred -EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe----cC
Confidence 6777777642 221111 111 1458889999888889999988888888887522 222222211 01
Q ss_pred cccceeEEEe--cCcEEEeecCCCeeEE--ecccCCCceE
Q psy6572 744 LHHVFALAVF--EDHLFWTDWEMKSIER--CDKYTGKNCT 779 (1416)
Q Consensus 744 l~~P~~lav~--~d~LYwtD~~~~~I~~--~nk~tG~~~~ 779 (1416)
-..|.+|++. +.+||+++...+.|.. ++..+|....
T Consensus 285 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 285 GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 2458888885 4579999887776544 4655665443
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.04 E-value=6.2e-08 Score=111.68 Aligned_cols=227 Identities=9% Similarity=-0.018 Sum_probs=156.9
Q ss_pred CCeEEEEe--cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC-eEEee-cCCC
Q psy6572 539 PPNLLFTN--KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP-ELLFP-ATSP 611 (1416)
Q Consensus 539 ~~~li~s~--~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~-~~l~~-l~~p 611 (1416)
..+++++. ...|+.+++.... ..+..+...+ +|+|++.++.||++..... .|+++.+. ... ..... ...|
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQ--TLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTC--EEEEEECSSSSCEEEEEEECSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCC--eEEEEECCCCceeEEecccCCCC
Confidence 34556654 4568888876544 2333345556 9999999999999988643 89999887 333 22222 6778
Q ss_pred ce-EEEEccCCcEEEeeCCCC--eEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE
Q psy6572 612 DG-LTVDWVGRNLYWCDKGLD--TIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 612 ~g-LAvD~~~~~LYwtD~~~~--~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~ 688 (1416)
.. |++++.++.||.+....+ .|.+.++........+. ....|.+|+++|...+||+++.+....|...+++.....
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 88 999999999994443334 89999987654433332 345689999999988999998764432666666644332
Q ss_pred EE----eecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCc---eEEEEeccCCCCcccccceeEEEe--cCcEE
Q psy6572 689 VI----ISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLN-GEN---IKIIVSRRMDPTINLHHVFALAVF--EDHLF 758 (1416)
Q Consensus 689 vl----v~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~---r~~v~~~~~~p~~~l~~P~~lav~--~d~LY 758 (1416)
.- +......|.+|++++..++||++....+.|..+++. |.. ...+.. -..|.+|++. +.+||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--------~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--------NNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--------SSCCCCEEECTTSSEEE
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--------CCCCceEEECCCCCEEE
Confidence 11 112345699999998777899999988999999985 444 333322 2467788885 45699
Q ss_pred EeecCCCeeEEecccCCCc
Q psy6572 759 WTDWEMKSIERCDKYTGKN 777 (1416)
Q Consensus 759 wtD~~~~~I~~~nk~tG~~ 777 (1416)
++....+.|..++..+|+.
T Consensus 237 v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECSSEEEEEEEETTTTEE
T ss_pred EEEcCCCEEEEEECCCCce
Confidence 9988888888887666543
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.02 E-value=1.2e-07 Score=109.19 Aligned_cols=255 Identities=11% Similarity=0.057 Sum_probs=161.2
Q ss_pred CCCeEEEEec--EEEEEEecC--Ccc-eE--EecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-C-CCeEEe--
Q psy6572 538 VPPNLLFTNK--YYIREVTQA--GVM-TI--RIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S-QPELLF-- 606 (1416)
Q Consensus 538 ~~~~li~s~~--~~I~~i~l~--g~~-~~--~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s-~~~~l~-- 606 (1416)
...+|+++.. ..|+.+.++ +.. .. .+.....+.+|+|++.++.||++.... +.|..+.++ . ..+.+.
T Consensus 48 dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 48 DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCCCccccccccc
Confidence 3455666554 466665554 322 21 122233788999999999999998754 367777663 1 111221
Q ss_pred e-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC--CceE----EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEE
Q psy6572 607 P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG--RFRK----VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGK 679 (1416)
Q Consensus 607 ~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG--~~~~----vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~r 679 (1416)
. ...|.+|++++.++.||+++...++|.+.++.. .... .+.......|++|+++|...+||++.... ..|..
T Consensus 126 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-~~i~~ 204 (343)
T 1ri6_A 126 EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-SSVDV 204 (343)
T ss_dssp CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-TEEEE
T ss_pred cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-CEEEE
Confidence 2 567899999999999999998888999988864 3222 22223345799999999988999998543 47888
Q ss_pred EecCCCC--CEE--Eee---cC---CCCCeeEEeecCCCeEEEecCCCCeEEEEeCC--CCceEEEEeccCCCCcccccc
Q psy6572 680 AKMDGSN--PKV--IIS---KN---LSWPNALTISYETNELFWGDAHEDYIAVSDLN--GENIKIIVSRRMDPTINLHHV 747 (1416)
Q Consensus 680 a~mDGs~--r~v--lv~---~~---l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld--G~~r~~v~~~~~~p~~~l~~P 747 (1416)
.+++... .+. .+. .. ..+|.+|++++..++||++....+.|...+++ +...+.+.... ....|
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~ 279 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-----TETQP 279 (343)
T ss_dssp EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-----CSSSC
T ss_pred EEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-----CCCcc
Confidence 8876422 111 111 11 34567899998788999998888888888876 44444443221 02337
Q ss_pred eeEEEe--cCcEEEeecCCCeeEE--ecccCCCceEEEEeCCCCCCeeeeeecccCC
Q psy6572 748 FALAVF--EDHLFWTDWEMKSIER--CDKYTGKNCTSVVKNLVHKPMDLRVYHPYRQ 800 (1416)
Q Consensus 748 ~~lav~--~d~LYwtD~~~~~I~~--~nk~tG~~~~~l~~~~~~~p~~I~v~h~~~q 800 (1416)
.+|++. +.+||++....+.|.. ++..+|....+..-.....|.+|.+.....+
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 888885 4579998876666544 4655564333221123357888887654433
No 84
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.00 E-value=6.5e-09 Score=123.07 Aligned_cols=223 Identities=14% Similarity=0.171 Sum_probs=146.3
Q ss_pred EEEEe-cEEEEEEecCCcc-eE-------EecccccceeeeeecC---CCeEEEeeccCC-----CccEEEEecC-C---
Q psy6572 542 LLFTN-KYYIREVTQAGVM-TI-------RIHNQTNAVGLDFDWV---DNCLYWSDVTMH-----GSSIRRSCNN-S--- 600 (1416)
Q Consensus 542 li~s~-~~~I~~i~l~g~~-~~-------~~~~l~~~~~l~~D~~---~~~LYwtD~~~~-----~~~I~r~~l~-s--- 600 (1416)
|+++. ...|+++..++.. +. ...+...+.+|++++. ++.||+++.... ..+|.|+.++ .
T Consensus 32 l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 32 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB
T ss_pred EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC
Confidence 55554 3467777766543 11 1223345688999986 899999976421 2378888776 2
Q ss_pred --CCeEEee-c-------CCCceEEEEccCCcEEEeeCC-------------CCeEEEeecCCCc------------eEE
Q psy6572 601 --QPELLFP-A-------TSPDGLTVDWVGRNLYWCDKG-------------LDTIEVAKLDGRF------------RKV 645 (1416)
Q Consensus 601 --~~~~l~~-l-------~~p~gLAvD~~~~~LYwtD~~-------------~~~I~v~~ldG~~------------~~v 645 (1416)
..++|+. + ..+.+|++++ .++||++... .++|.+++.+|+. +..
T Consensus 112 ~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~ 190 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAE 190 (353)
T ss_dssp EEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTT
T ss_pred CCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCcc
Confidence 2334433 2 3478999998 5699999633 3589999999872 233
Q ss_pred EEcCCCCCcceeeecCCcceEEEeeCCCC--ceEEEEecCCCC----------------------------CEEEeecCC
Q psy6572 646 LINKGLQEPRGIALNPAYGYMYWTDWGQN--AHIGKAKMDGSN----------------------------PKVIISKNL 695 (1416)
Q Consensus 646 Li~~~l~~P~gIavDp~~g~LYWtD~g~~--~~I~ra~mDGs~----------------------------r~vlv~~~l 695 (1416)
++..++..|.+|++||..|.||++|.+.. ..|.++...+.. .-++.-...
T Consensus 191 i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 270 (353)
T 2g8s_A 191 IWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDS 270 (353)
T ss_dssp EEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSC
T ss_pred EEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCC
Confidence 44578899999999998899999997643 234433211110 000001112
Q ss_pred CCCeeEEeec------CCCeEEEecCCCCeEEEEeCCCCceE---EEEeccCCCCcccccceeEEEe-cCcEEEe-ecCC
Q psy6572 696 SWPNALTISY------ETNELFWGDAHEDYIAVSDLNGENIK---IIVSRRMDPTINLHHVFALAVF-EDHLFWT-DWEM 764 (1416)
Q Consensus 696 ~~P~gLaiD~------~~~rLYWtD~~~~~I~~~~ldG~~r~---~v~~~~~~p~~~l~~P~~lav~-~d~LYwt-D~~~ 764 (1416)
..|.||++.. ..+.||+++...++|.++.+++.... .++.. ....|.+|++. .+.||++ +..+
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~------~~~rp~~v~~~pdG~lyv~td~~~ 344 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTD------RGQRIRDVRTGPDGYLYVLTDESS 344 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGG------GCCCEEEEEECTTSCEEEEECSTT
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccC------CCCceeEEEECCCCcEEEEEeCCC
Confidence 3588999963 35899999999999999999864221 11111 13579999985 6789996 7678
Q ss_pred CeeEEec
Q psy6572 765 KSIERCD 771 (1416)
Q Consensus 765 ~~I~~~n 771 (1416)
++|+|+.
T Consensus 345 g~I~ri~ 351 (353)
T 2g8s_A 345 GELLKVS 351 (353)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 8898874
No 85
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.98 E-value=2.5e-10 Score=105.57 Aligned_cols=75 Identities=35% Similarity=0.905 Sum_probs=63.6
Q ss_pred ccccccCCCCCCcccc-cceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCcc-ceeeecCCeeeecCCCCcEEec
Q psy6572 451 FVNECNVSHGGQLCAH-ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCS-HYCRNTLGSYSCSCAPGYALLS 527 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~-~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Cs-q~C~nt~gsy~C~C~~Gy~L~~ 527 (1416)
+|+||.. ... |.+ .|++++++|+|.|++||.+ +++.|++|+||. ..+|. +.|+|+.|+|+|.|++||++.+
T Consensus 4 dideC~~-~~~--C~~g~C~n~~g~y~C~C~~Gy~~---~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 4 DMDECKE-PDV--CKHGQCINTDGSYRCECPFGYIL---AGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCSSSS-TTS--CSSSEECCCSSCCCEECCTTEEE---ETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred ccccCCC-CCC--cCCCEEEecCCCEEEECCCCeEC---CCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence 4677864 233 765 8999999999999999987 467899999998 77887 5899999999999999999887
Q ss_pred CCCce
Q psy6572 528 DKHGC 532 (1416)
Q Consensus 528 dg~sC 532 (1416)
+ ++|
T Consensus 78 ~-~~C 81 (82)
T 1emn_A 78 M-MTC 81 (82)
T ss_dssp S-SCC
T ss_pred C-Ccc
Confidence 7 665
No 86
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.97 E-value=7.5e-08 Score=112.97 Aligned_cols=212 Identities=15% Similarity=0.174 Sum_probs=144.2
Q ss_pred eEEEEec--EEEEEEecCCcc-eEE-------ecccccceeeeeecC---CCeEEEeeccCCCccEEEEecCC-------
Q psy6572 541 NLLFTNK--YYIREVTQAGVM-TIR-------IHNQTNAVGLDFDWV---DNCLYWSDVTMHGSSIRRSCNNS------- 600 (1416)
Q Consensus 541 ~li~s~~--~~I~~i~l~g~~-~~~-------~~~l~~~~~l~~D~~---~~~LYwtD~~~~~~~I~r~~l~s------- 600 (1416)
.||++.+ ..|+++..++.. +.+ ..+...+.+|++++. ++.||++.......+|.|+.++.
T Consensus 44 ~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~ 123 (347)
T 3das_A 44 DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQ 123 (347)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCC
T ss_pred cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCccccc
Confidence 4666654 578888765332 221 234566789999884 78999875433335899988762
Q ss_pred --CCeEEee------cCCCceEEEEccCCcEEEeeC-------------CCCeEEEeecCCC--------ceEEEEcCCC
Q psy6572 601 --QPELLFP------ATSPDGLTVDWVGRNLYWCDK-------------GLDTIEVAKLDGR--------FRKVLINKGL 651 (1416)
Q Consensus 601 --~~~~l~~------l~~p~gLAvD~~~~~LYwtD~-------------~~~~I~v~~ldG~--------~~~vLi~~~l 651 (1416)
..++|+. ......|++++ .++||++-. ..++|.+++.+|+ ..+ +...++
T Consensus 124 ~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~-i~a~G~ 201 (347)
T 3das_A 124 LGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSP-VYSYGH 201 (347)
T ss_dssp BCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCC-EEEBCC
T ss_pred CCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCe-EEeeCC
Confidence 2455544 34567799997 568999942 3579999999998 333 455789
Q ss_pred CCcceeeecCCcceEEEeeCCCC--ceEEEEecCCCCC-----------------EEEeecCCCCCeeEEeecCCCeEEE
Q psy6572 652 QEPRGIALNPAYGYMYWTDWGQN--AHIGKAKMDGSNP-----------------KVIISKNLSWPNALTISYETNELFW 712 (1416)
Q Consensus 652 ~~P~gIavDp~~g~LYWtD~g~~--~~I~ra~mDGs~r-----------------~vlv~~~l~~P~gLaiD~~~~rLYW 712 (1416)
.+|.||++|| .|.||++|.+.. ..|.++. .|.+- ..........|.||++- .+.||.
T Consensus 202 RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~ 277 (347)
T 3das_A 202 RNVQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWM 277 (347)
T ss_dssp SBCCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEE
T ss_pred CCcceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE--cCceee
Confidence 9999999999 599999997653 3455543 23220 01111122468899994 789999
Q ss_pred ecCCCCeEEEEeCCCCce----EEEEeccCCCCcccccceeEEE-ecCcEEEeecCC
Q psy6572 713 GDAHEDYIAVSDLNGENI----KIIVSRRMDPTINLHHVFALAV-FEDHLFWTDWEM 764 (1416)
Q Consensus 713 tD~~~~~I~~~~ldG~~r----~~v~~~~~~p~~~l~~P~~lav-~~d~LYwtD~~~ 764 (1416)
+..+..+|.++.+++... +.++.+. ...|.+|++ -.+.||+++...
T Consensus 278 ~~l~~~~l~~v~~~~~~~~~~~e~~l~~~------~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 278 AGLRGERLWRIPLKGTAAAADPQAFLEGE------YGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp EESTTCSEEEEEEETTEESSCCEEESTTT------SSCEEEEEEEETTEEEEEECTT
T ss_pred ccccCCEEEEEEecCCceecceEEeecCC------CCCccEEEECCCCcEEEEEcCC
Confidence 999999999999876532 3343332 567999998 478999986543
No 87
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.96 E-value=2.1e-07 Score=107.22 Aligned_cols=254 Identities=13% Similarity=0.109 Sum_probs=159.9
Q ss_pred CCeEEEEec--EEEEEEecCCcc--eEEeccccccee-eeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCC
Q psy6572 539 PPNLLFTNK--YYIREVTQAGVM--TIRIHNQTNAVG-LDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSP 611 (1416)
Q Consensus 539 ~~~li~s~~--~~I~~i~l~g~~--~~~~~~l~~~~~-l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p 611 (1416)
..+|+++.. ..|+.+++.... ...+.....+.. ++|++.++.||..........|..+.+. ......+. ...|
T Consensus 51 g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 130 (331)
T 3u4y_A 51 CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA 130 (331)
T ss_dssp SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc
Confidence 345666543 468888776544 223334455666 9999999999943333111278888887 32222223 5678
Q ss_pred ceEEEEccCCcEEEeeCCCCe-EEEeecCCCce-----EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDT-IEVAKLDGRFR-----KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~-I~v~~ldG~~~-----~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
.+|++++.++.||+++...+. |.+.+++.... ..++ .....|++|+++|..++||++.... ..|...++...
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~-~~v~v~d~~~~ 208 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIG-NSIGILETQNP 208 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTT-TEEEEEECSST
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCC-CeEEEEECCCC
Confidence 999999999899999988777 88877764321 1122 3445699999999988999998654 37888888644
Q ss_pred CC---EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCC---CCcccccceeEEE--ecCcE
Q psy6572 686 NP---KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMD---PTINLHHVFALAV--FEDHL 757 (1416)
Q Consensus 686 ~r---~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~---p~~~l~~P~~lav--~~d~L 757 (1416)
.. ...+. .-..|.+|++++..++||++....+.|..+++.....+.+...... .......+.+|++ .+.+|
T Consensus 209 ~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 287 (331)
T 3u4y_A 209 ENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKL 287 (331)
T ss_dssp TSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEE
T ss_pred cccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEE
Confidence 43 22232 3467899999987777999988888899999875544333221100 0000111123565 45679
Q ss_pred EEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeeeccc
Q psy6572 758 FWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVYHPY 798 (1416)
Q Consensus 758 YwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~h~~ 798 (1416)
|++....+.|...+..+ .... .+ ..+....++.+.||-
T Consensus 288 ~v~~~~~~~v~v~d~~~-~~~~-~~-~~~~~~g~~~~~~~~ 325 (331)
T 3u4y_A 288 FISANISRELKVFTISG-KVVG-YV-AGIEANGGIAICHPD 325 (331)
T ss_dssp EEEETTTTEEEEEETTS-CEEE-EC-TTCCCBSCEEECCCC
T ss_pred EEecCCCCcEEEEEecC-Cccc-ce-ecccccCCeEEECCc
Confidence 99988888887766432 2111 12 344455566666653
No 88
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.95 E-value=8.4e-08 Score=111.10 Aligned_cols=217 Identities=13% Similarity=0.125 Sum_probs=143.8
Q ss_pred eEEEEe--cEEEEEEecCCcc-e-EEecccccceeeeeecCCCeEEEeeccC--CCccEEEEecC-CCCeEEee----cC
Q psy6572 541 NLLFTN--KYYIREVTQAGVM-T-IRIHNQTNAVGLDFDWVDNCLYWSDVTM--HGSSIRRSCNN-SQPELLFP----AT 609 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~-~-~~~~~l~~~~~l~~D~~~~~LYwtD~~~--~~~~I~r~~l~-s~~~~l~~----l~ 609 (1416)
.|+++. ...|+++++++.. . +.......+.+|++++. ++||++.... ....|+++.++ ...+.+.. ..
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 135 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY 135 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence 355543 4578888887655 2 22234467889999875 4688876543 01378888877 33332322 45
Q ss_pred CCceEEEEccCCcEEEeeCC------CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 610 SPDGLTVDWVGRNLYWCDKG------LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~------~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
.|.+|++|+ .++||+++.. ...|+++++++...+.+. ..+..|.+|+++|...+||+++... ..|.+.+++
T Consensus 136 ~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~-~~i~~~d~~ 212 (333)
T 2dg1_A 136 CIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTA-NRLHRIALE 212 (333)
T ss_dssp CEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGG-TEEEEEEEC
T ss_pred cccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCC-CeEEEEEec
Confidence 688999997 5689998874 467888888765444443 3456799999999988899998543 378888884
Q ss_pred --CCCCEE-----Eee-cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEec-
Q psy6572 684 --GSNPKV-----IIS-KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFE- 754 (1416)
Q Consensus 684 --Gs~r~v-----lv~-~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~- 754 (1416)
|..... +.. .....|.+|++|. .++||+++...+.|.+++.+|...+.+..... ..-.+..|.++++..
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~-~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR-DEGHMLRSTHPQFIPG 290 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEEEEECTTG-GGTCSCBCCEEEECTT
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCCCCEEEEEEcCCC-ccccccCcceEEECCC
Confidence 443221 111 1224799999996 68899998888899999998876555532210 000122688888853
Q ss_pred -CcEEEeecC
Q psy6572 755 -DHLFWTDWE 763 (1416)
Q Consensus 755 -d~LYwtD~~ 763 (1416)
++||++...
T Consensus 291 g~~L~v~~~~ 300 (333)
T 2dg1_A 291 TNQLIICSND 300 (333)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEEeCc
Confidence 478887765
No 89
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.95 E-value=6e-10 Score=89.92 Aligned_cols=41 Identities=44% Similarity=0.918 Sum_probs=35.0
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEADCSTCG 69 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~C~~C~ 69 (1416)
.+.|++++|+|.|++||+..|+|||+.||+|||||.+| .|.
T Consensus 3 ~~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c-~C~ 43 (45)
T 1d2l_A 3 PPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA-LCH 43 (45)
T ss_dssp CCBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTT-TCC
T ss_pred CCcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCC-cCC
Confidence 35788899999999999999999999999999999887 553
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.94 E-value=6.1e-07 Score=103.15 Aligned_cols=231 Identities=12% Similarity=0.095 Sum_probs=150.6
Q ss_pred CeEEEEe--cEEEEEEecC--Ccc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC--C-CCeEEee---
Q psy6572 540 PNLLFTN--KYYIREVTQA--GVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--S-QPELLFP--- 607 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~--g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s-~~~~l~~--- 607 (1416)
.+||+++ ...|+.++++ +.. ...+.....+.+|+|++.++.||++.... ..|..+.++ + ..+.+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCCceeecccccc
Confidence 3555553 3456666664 332 12234456788999999999999998763 367776665 2 3333332
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecC-CCceEEEE-cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRFRKVLI-NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~~~vLi-~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
...|.+|++++.++.||++....+.|.+.+++ |...+.+. ......|.+|+++|...+||+++.+. ..|.+.+++..
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~ 161 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-DRICLFTVSDD 161 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-TEEEEEEECTT
T ss_pred CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-CEEEEEEecCC
Confidence 45899999999999999999888889988883 33222222 24456799999999988999998443 36777777642
Q ss_pred CCEE------EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC--CceEEEEe-ccCCCC-cccccceeEEEe--
Q psy6572 686 NPKV------IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNG--ENIKIIVS-RRMDPT-INLHHVFALAVF-- 753 (1416)
Q Consensus 686 ~r~v------lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG--~~r~~v~~-~~~~p~-~~l~~P~~lav~-- 753 (1416)
.... +....-..|++|++++...+||++....+.|...+++. ...+.+.. ...+.. .....|.+|++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 2221 11122357899999988788999998888999999853 22211111 110000 112356678875
Q ss_pred cCcEEEeecCCCeeEEeccc
Q psy6572 754 EDHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 754 ~d~LYwtD~~~~~I~~~nk~ 773 (1416)
+.+||++....+.|...+..
T Consensus 242 g~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEecCCCEEEEEEEc
Confidence 45798898877877776654
No 91
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.90 E-value=1.7e-07 Score=109.09 Aligned_cols=207 Identities=15% Similarity=0.102 Sum_probs=135.4
Q ss_pred ecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEee
Q psy6572 563 IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 563 ~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ 637 (1416)
......|.+|+|++.++ ||+++.......|+++.+. ...+.+.. ...|.+||+++.++.||++....+.|.+.+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34567889999998665 9998864212478877776 33333322 678999999999999999998888888888
Q ss_pred cC--CCceEE--EEcC--------CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEe---e-cCCCCCeeE
Q psy6572 638 LD--GRFRKV--LINK--------GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVII---S-KNLSWPNAL 701 (1416)
Q Consensus 638 ld--G~~~~v--Li~~--------~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv---~-~~l~~P~gL 701 (1416)
++ |....+ +... ....|.+|+++|... ||+++.+.. .|...+++...+...+ . ..-..|++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSD-KVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTT-EEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCC-EEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 75 333222 1111 123477899999866 999997654 6777777632322221 1 223478999
Q ss_pred EeecCCCeEEEecCCCCeEEEEeCCC--CceEEEEeccCCCC--cccccceeEEEe--cCcEEEeecCCCeeEEecc
Q psy6572 702 TISYETNELFWGDAHEDYIAVSDLNG--ENIKIIVSRRMDPT--INLHHVFALAVF--EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 702 aiD~~~~rLYWtD~~~~~I~~~~ldG--~~r~~v~~~~~~p~--~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk 772 (1416)
++++..++||+++...+.|...+++. ...+.+......+. .....|.+|++. +.+||++....+.|...+.
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 99987777999998888888888764 22222221110000 011347788884 4579999988777766653
No 92
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=2.1e-07 Score=105.14 Aligned_cols=195 Identities=15% Similarity=0.052 Sum_probs=133.1
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee---cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC-c
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR-F 642 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~-~ 642 (1416)
.+.||+|+.. ++||.+......+.|.++++.+ ....-+. ...++||+++ ++.||++.+..++|.+.++... .
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 4689999875 7999987532235899999883 3222222 2234566665 7899999999999999998743 2
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE--EEeec---CCCCCeeEEeecCCCeEEEecCCC
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK--VIISK---NLSWPNALTISYETNELFWGDAHE 717 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~--vlv~~---~l~~P~gLaiD~~~~rLYWtD~~~ 717 (1416)
...+- .+ .|.|++|.+..++||.++ +. .+|..++....... +.+.. .+..|++|++. .++||...+..
T Consensus 99 ~~~i~-~g--~~~g~glt~Dg~~l~vs~-gs-~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~ 171 (266)
T 2iwa_A 99 IKNFT-HQ--MKDGWGLATDGKILYGSD-GT-SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT 171 (266)
T ss_dssp EEEEE-CC--SSSCCEEEECSSSEEEEC-SS-SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS
T ss_pred EEEEE-CC--CCCeEEEEECCCEEEEEC-CC-CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC
Confidence 33332 22 466677777778999999 53 48888887664422 22222 25578899876 68999999999
Q ss_pred CeEEEEeC-CCCceEEEEeccCC------CCcccccceeEEEe--cCcEEEeecCCCeeEEecc
Q psy6572 718 DYIAVSDL-NGENIKIIVSRRMD------PTINLHHVFALAVF--EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 718 ~~I~~~~l-dG~~r~~v~~~~~~------p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk 772 (1416)
+.|.++++ .|.-...|-..... .......|.||++. +++||+|.....+|+.++.
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 99999998 55555555432100 00012467999997 4689999998888888753
No 93
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.89 E-value=4.7e-07 Score=106.12 Aligned_cols=202 Identities=12% Similarity=0.041 Sum_probs=133.6
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecC--CCCeEE---ee------------cCCCceEEEEccCCcEEEee
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--SQPELL---FP------------ATSPDGLTVDWVGRNLYWCD 627 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s~~~~l---~~------------l~~p~gLAvD~~~~~LYwtD 627 (1416)
....+..|++ .++.||+++... +.|..+.++ +....+ .. ...|.+|++++.++.||+++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~--~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSG--GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTT--TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEE--CCCEEEEEECCC--CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 3456778887 677899988764 377777765 221111 11 12346799999888999999
Q ss_pred CCCCeEEEeecCCCce-------------EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee--
Q psy6572 628 KGLDTIEVAKLDGRFR-------------KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-- 692 (1416)
Q Consensus 628 ~~~~~I~v~~ldG~~~-------------~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-- 692 (1416)
.+.++|.+.+++.... ..+.......|++|+++|...+||+++... ..|.+.+++....+.+..
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG-GTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-CEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC-CeEEEEEecCCceEEeEEEe
Confidence 9999999888764321 223334556799999999988999998543 367777776332222211
Q ss_pred ---cCCCCCeeEEeecCCCeEEEecCC-CCeEEEEeCC--CCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCC
Q psy6572 693 ---KNLSWPNALTISYETNELFWGDAH-EDYIAVSDLN--GENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEM 764 (1416)
Q Consensus 693 ---~~l~~P~gLaiD~~~~rLYWtD~~-~~~I~~~~ld--G~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~ 764 (1416)
.....|.+|++++..++||++... .+.|...+++ ....+.+.... .-..|.+|++. +.+||.+....
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-----~g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-----TGIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-----CSSCCCEEEECTTSCEEEEEETTT
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-----CCCCCceEEECCCCCEEEEEECCC
Confidence 124567899999888889999987 7878777765 22333332211 02368888885 45799998777
Q ss_pred CeeEE--ecccCCC
Q psy6572 765 KSIER--CDKYTGK 776 (1416)
Q Consensus 765 ~~I~~--~nk~tG~ 776 (1416)
+.|.. ++..+|.
T Consensus 328 ~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 328 NVIQIFERDQATGL 341 (361)
T ss_dssp TEEEEEEECTTTCC
T ss_pred CCEEEEEEECCCCc
Confidence 76554 6655554
No 94
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.89 E-value=7.9e-10 Score=89.23 Aligned_cols=39 Identities=44% Similarity=1.085 Sum_probs=35.4
Q ss_pred CccCCCCCceecCCCCceecCcccccCCCCCCCCCCCCCCcc
Q psy6572 203 STCKANNNVFQCDNNKTCISKSWVCDGTYDCTDRSDENSTYC 244 (1416)
Q Consensus 203 ~~C~~~~~~F~C~~~~~CI~~~w~CDg~~DC~D~sDE~~~~c 244 (1416)
.+|.+ ++|+| .+++|||++|+|||+.||+|||||..+.|
T Consensus 4 ~~C~~--~~F~C-~~g~CI~~~~~CDG~~DC~DgSDE~~c~C 42 (45)
T 1d2l_A 4 PQCQP--GEFAC-ANSRCIQERWKCDGDNDCLDNSDEAPALC 42 (45)
T ss_dssp CBTTB--TCEEE-TTTEEECGGGTTTSSCTTTTCSTTSTTTC
T ss_pred CcCCC--CceEc-CCCCeEehhhccCCCCCCCCCCCCCCCcC
Confidence 57877 99999 88999999999999999999999988555
No 95
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.89 E-value=6.9e-08 Score=118.05 Aligned_cols=154 Identities=13% Similarity=0.132 Sum_probs=113.6
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCC------CceEEEEcc---CCcEEE
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATS------PDGLTVDWV---GRNLYW 625 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~------p~gLAvD~~---~~~LYw 625 (1416)
++++.++..|.+|+|++. ++||+++.. +.+|+++... +..+++.. +.. +.|||+++. ++.||+
T Consensus 20 ~~~a~~l~~P~~~a~~pd-G~l~V~e~~--gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPD-NQIWLTERA--TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETT--TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEECCCCCceEEEEcCC-CcEEEEEcC--CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 556678999999999985 579999876 3479888765 44444433 222 339999986 899999
Q ss_pred eeCC------------CCeEEEeecCCC-----ceEEEEc----CCCCCcceeeecCCcceEEEeeCC------------
Q psy6572 626 CDKG------------LDTIEVAKLDGR-----FRKVLIN----KGLQEPRGIALNPAYGYMYWTDWG------------ 672 (1416)
Q Consensus 626 tD~~------------~~~I~v~~ldG~-----~~~vLi~----~~l~~P~gIavDp~~g~LYWtD~g------------ 672 (1416)
+... ..+|.++.+++. ..++|+. .....+.+|+++|. |+||++...
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTSGGGTTSC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCCCCccccccc
Confidence 9864 357888887642 2345543 23567999999996 799998531
Q ss_pred -------------------CCceEEEEecCCCC----------CEEEeecCCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 673 -------------------QNAHIGKAKMDGSN----------PKVIISKNLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 673 -------------------~~~~I~ra~mDGs~----------r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
...+|.|++.||+. +..|+..++..|.||++|+ +++||++|...+
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECSS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCCC
Confidence 13589999999983 3346667899999999998 799999997544
No 96
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.88 E-value=8.3e-10 Score=85.52 Aligned_cols=35 Identities=49% Similarity=1.053 Sum_probs=28.6
Q ss_pred CCCCceecCCCceeCCCcccCCCCCCCCCCcCcCC
Q psy6572 1055 CDPTYFKCNNYKCIPGSWHCDYDDDCGDGSDEKNC 1089 (1416)
Q Consensus 1055 C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C 1089 (1416)
|.+.+|+|.+|+|||.+|+|||..||.|||||.+|
T Consensus 2 C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C 36 (37)
T 1ajj_A 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36 (37)
T ss_dssp CCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTC
T ss_pred CCCCceEcCCCCeechhhccCCCCCCCCCccccCC
Confidence 66778888888888888888888888888888776
No 97
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.88 E-value=2e-07 Score=108.60 Aligned_cols=208 Identities=13% Similarity=0.047 Sum_probs=140.2
Q ss_pred CCeEEEEe--cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cC
Q psy6572 539 PPNLLFTN--KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------AT 609 (1416)
Q Consensus 539 ~~~li~s~--~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~ 609 (1416)
...|+|++ ...|+++++.+...........+.+|+++.. +++|++... .|+++.+. ...+.+.. ..
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~d-g~l~v~~~~----gl~~~d~~~g~~~~~~~~~~~~~~~ 134 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISD-SKQLIASDD----GLFLRDTATGVLTLHAELESDLPGN 134 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEET-TEEEEEETT----EEEEEETTTCCEEEEECSSTTCTTE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCC-CeEEEEECC----CEEEEECCCCcEEEEeeCCCCCCCC
Confidence 35667765 4578888887655222222346778888865 556665422 58888876 44444433 13
Q ss_pred CCceEEEEccCCcEEEeeCC------CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 610 SPDGLTVDWVGRNLYWCDKG------LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~------~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
.|.+|++|+. ++||+++.. ...|++++ +|..+.+ . ..+..|.+|+++|...+|||++... ..|.+.+++
T Consensus 135 ~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~-~-~~~~~~~~i~~s~dg~~lyv~~~~~-~~I~~~d~~ 209 (326)
T 2ghs_A 135 RSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KGKVTKL-F-ADISIPNSICFSPDGTTGYFVDTKV-NRLMRVPLD 209 (326)
T ss_dssp EEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TTEEEEE-E-EEESSEEEEEECTTSCEEEEEETTT-CEEEEEEBC
T ss_pred CCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CCcEEEe-e-CCCcccCCeEEcCCCCEEEEEECCC-CEEEEEEcc
Confidence 4778999974 568888753 35788888 6654433 2 3456799999999988999998654 489999885
Q ss_pred ---C-C--CCEEEee--cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-c
Q psy6572 684 ---G-S--NPKVIIS--KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-E 754 (1416)
Q Consensus 684 ---G-s--~r~vlv~--~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~ 754 (1416)
| . .++++.. .....|.+|++|. +++||++.+..+.|.+++.+|...+.+.. . ...|.++++. .
T Consensus 210 ~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~g~~~~~i~~-~------~~~~~~~af~g~ 281 (326)
T 2ghs_A 210 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTDGNHIARYEV-P------GKQTTCPAFIGP 281 (326)
T ss_dssp TTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTTCCEEEEEEC-S------CSBEEEEEEEST
T ss_pred cccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCCCCEEEEEEC-C------CCCcEEEEEecC
Confidence 4 2 2344443 2345799999995 67899998888899999998765554432 1 3468888886 2
Q ss_pred --CcEEEeecCC
Q psy6572 755 --DHLFWTDWEM 764 (1416)
Q Consensus 755 --d~LYwtD~~~ 764 (1416)
++||++....
T Consensus 282 d~~~L~vt~~~~ 293 (326)
T 2ghs_A 282 DASRLLVTSARE 293 (326)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEecCC
Confidence 5788887655
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.88 E-value=7.1e-07 Score=105.36 Aligned_cols=229 Identities=16% Similarity=0.145 Sum_probs=160.1
Q ss_pred eEEEEe--cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEE
Q psy6572 541 NLLFTN--KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLT 615 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLA 615 (1416)
+||++. ...|+.+++.... ...+.....+.+++|.+.++.||++.... +.|+.+.+. ......+. ...+.+|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHS--NDVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGG--TEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCC--CeEEEEECCCCeEEEEEECCCCccceE
Confidence 455544 3467777776544 33334445688999999999999987654 378888876 32222222 45788999
Q ss_pred EEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCC
Q psy6572 616 VDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNL 695 (1416)
Q Consensus 616 vD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l 695 (1416)
+.+.++.||++....+.|.+.++.......++. ....|.+|++.|...+||++.... ..|...++........+. .-
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~-~~ 157 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGD-KTVSVINTVTKAVINTVS-VG 157 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEE-CC
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCC-CEEEEEECCCCcEEEEEe-cC
Confidence 999999999999888999999988655433332 345689999999988999987544 478888876543333333 23
Q ss_pred CCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeec--CCCeeEEec
Q psy6572 696 SWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDW--EMKSIERCD 771 (1416)
Q Consensus 696 ~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~--~~~~I~~~n 771 (1416)
..|.++++.+..++||++....+.|...++........+.. ...|.++++. +.+||.+.. ..+.|...+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-------CCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 56899999988888999988888999999876544444432 2457777774 456777776 667788877
Q ss_pred ccCCCceEEE
Q psy6572 772 KYTGKNCTSV 781 (1416)
Q Consensus 772 k~tG~~~~~l 781 (1416)
..++.....+
T Consensus 231 ~~~~~~~~~~ 240 (391)
T 1l0q_A 231 TGTNKITARI 240 (391)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 6666544443
No 99
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.86 E-value=1.3e-09 Score=87.35 Aligned_cols=38 Identities=42% Similarity=1.052 Sum_probs=31.8
Q ss_pred CCccCCCcEEecC-CeEecccccccCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDN-NKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 28 ~~~c~~~~f~C~n-~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
...|++++|+|.| ++|||..|+|||+.||+|||||.+|
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 42 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNC 42 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCC
Confidence 4568888888888 8888888888888888888888876
No 100
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.86 E-value=1.1e-09 Score=88.31 Aligned_cols=38 Identities=42% Similarity=0.959 Sum_probs=30.0
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
...|++++|+|.|++|||..|+|||+.||.|||||.+|
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C 42 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 42 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCC
Confidence 34678888888888888888888888888888888876
No 101
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.86 E-value=1e-09 Score=90.66 Aligned_cols=43 Identities=30% Similarity=0.743 Sum_probs=36.1
Q ss_pred CCccCCCcEEec-CCeEecccccccCCCCCCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCD-NNKCILSSHTCNNINDCGDGSDEADCSTCGN 70 (1416)
Q Consensus 28 ~~~c~~~~f~C~-n~~ci~~~~~Cdg~~dC~d~sDE~~C~~C~~ 70 (1416)
...|++++|+|. +++|||..|+|||+.||.|||||.+|..|.+
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C~~C~~ 47 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLY 47 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGGGTCCC
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCccccccCCCC
Confidence 457888999995 8899999999999999999999988866653
No 102
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.84 E-value=7.4e-10 Score=85.78 Aligned_cols=37 Identities=57% Similarity=1.200 Sum_probs=34.4
Q ss_pred CCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 159 NCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 159 ~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
+|++.+|+|.+|+|||.+|+|||..||.|| |||.+|+
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~Dg-----sDE~~C~ 37 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDK-----SDEENCA 37 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTC-----GGGTTCC
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCC-----ccccCCC
Confidence 377899999999999999999999999999 9999883
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.84 E-value=8.8e-07 Score=104.57 Aligned_cols=239 Identities=13% Similarity=0.119 Sum_probs=166.6
Q ss_pred eEecCCCCCeEEEEe--cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee
Q psy6572 532 CKATSDVPPNLLFTN--KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP 607 (1416)
Q Consensus 532 C~a~~~~~~~li~s~--~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~ 607 (1416)
+.+......+|+++. ...|+.+++.... ...+.....+.+++|.+.++.||++.... ..|+.+.+.+ .......
T Consensus 36 ~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~~~~~~~~~~ 113 (391)
T 1l0q_A 36 GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVK 113 (391)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEE
T ss_pred eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCC--CEEEEEECCCCeEEEEEe
Confidence 334434445665653 5578888876544 22333334788999999999999987664 3788888873 2222223
Q ss_pred -cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 608 -ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 608 -l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
...+.+|++.+.++.||++....+.|.+.++........+. ....|.++++.|...+||++.... ..|...++....
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~-~~v~~~d~~~~~ 191 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFDS-MSISVIDTVTNS 191 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe-cCCCcceEEECCCCCEEEEEeCCC-CEEEEEECCCCe
Confidence 56788999999888999999989999999987554333332 235689999999988999887543 478888876554
Q ss_pred CEEEeecCCCCCeeEEeecCCCeEEEecC--CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeec
Q psy6572 687 PKVIISKNLSWPNALTISYETNELFWGDA--HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDW 762 (1416)
Q Consensus 687 r~vlv~~~l~~P~gLaiD~~~~rLYWtD~--~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~ 762 (1416)
....+. ....|.+|++.+...+||.+.. ..+.|...++........+.. -..|.+|++. +.+||++..
T Consensus 192 ~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 192 VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-------GPDPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-------CSSEEEEEECTTSSEEEEEET
T ss_pred EEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-------CCCccEEEEccCCCEEEEEcC
Confidence 333333 3456889999988888998876 678999999865544433332 2357788875 457888988
Q ss_pred CCCeeEEecccCCCceEEEE
Q psy6572 763 EMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 763 ~~~~I~~~nk~tG~~~~~l~ 782 (1416)
..+.|...+..+++....+.
T Consensus 264 ~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 264 FXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEE
Confidence 88889888877776555543
No 104
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.83 E-value=3.4e-07 Score=102.83 Aligned_cols=174 Identities=13% Similarity=0.126 Sum_probs=121.0
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC--CCCeEEee--c---CCC-----c
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--SQPELLFP--A---TSP-----D 612 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s~~~~l~~--l---~~p-----~ 612 (1416)
...|.++++.|.. .+.+.+...+.||+++. .+.+|+++...+ +|+++.++ +...++.. + ..+ +
T Consensus 48 ~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~--~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~E 124 (255)
T 3qqz_A 48 PAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDY--AIYVISLTPNSEVKILKKIKIPLQESPTNCGFE 124 (255)
T ss_dssp TEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTT--EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCE
T ss_pred CCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCC--cEEEEEcCCCCeeeeeeeeccccccccccCCcc
Confidence 3468888888665 45566778999999984 556667766643 78877776 22122221 1 234 8
Q ss_pred eEEEEccCCcEEEeeCCCC-eEEEee--cCCCceEEEEc------CCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 613 GLTVDWVGRNLYWCDKGLD-TIEVAK--LDGRFRKVLIN------KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~-~I~v~~--ldG~~~~vLi~------~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
|||+|+.++.||.+..... .|+..+ +.+...+++.. ..+..+.+|++||.+++||+.... ...|..++++
T Consensus 125 GLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~-s~~L~~~d~~ 203 (255)
T 3qqz_A 125 GLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE-SRALQEVTLV 203 (255)
T ss_dssp EEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT-TTEEEEECTT
T ss_pred eEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC-CCeEEEEcCC
Confidence 9999999999999887655 677776 22223344321 246689999999999999999744 4589999999
Q ss_pred CCCCEEEeec--------CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 684 GSNPKVIISK--------NLSWPNALTISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 684 Gs~r~vlv~~--------~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
|..+..+.-. .+..|.|||+|. +++||++.- -+.++++..+
T Consensus 204 g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE-~n~~y~f~~~ 252 (255)
T 3qqz_A 204 GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSE-PNRFYRFTPQ 252 (255)
T ss_dssp CCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEET-TTEEEEEEC-
T ss_pred CCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcC-CceEEEEEec
Confidence 9854444322 257899999997 678999953 3577777654
No 105
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.83 E-value=7e-10 Score=91.70 Aligned_cols=38 Identities=45% Similarity=1.024 Sum_probs=30.8
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
...|++++|+|.||+|||..|+|||+.||+|||||.+|
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~ 41 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNC 41 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSC
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCCCccccc
Confidence 45678888888888888888888888888888888776
No 106
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.82 E-value=1.7e-09 Score=86.71 Aligned_cols=39 Identities=36% Similarity=0.837 Sum_probs=36.0
Q ss_pred CcCCCCCCcccCC-CceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 157 KMNCSGDKFLCRN-GNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 157 ~~~C~~~~f~C~~-g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
...|+.++|+|.+ |+|||..|+|||+.||.|| |||.+|+
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~Dg-----SDE~~C~ 43 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQ-----ADEDNCG 43 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSC-----CTTSSCC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCC-----cccCCCC
Confidence 3579999999999 9999999999999999999 9999883
No 107
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.81 E-value=2.7e-09 Score=85.04 Aligned_cols=39 Identities=51% Similarity=1.181 Sum_probs=34.5
Q ss_pred CCCCCCceeeCCCCCeEcCcccccCCCCCCCCCCCccccCCc
Q psy6572 247 SECNLFEFRCNSTGQCIPITWVCDGVTDCIDKSDEHHSQDCL 288 (1416)
Q Consensus 247 ~~C~~~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~ 288 (1416)
..|.+++|+|.++++|||..|+|||+.||.||||| .+|.
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE---~~C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE---KSCE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTT---TTCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcc---cCCC
Confidence 36888999996569999999999999999999999 5674
No 108
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.81 E-value=2.5e-09 Score=85.23 Aligned_cols=36 Identities=36% Similarity=0.790 Sum_probs=25.4
Q ss_pred ccCCCcEEecC-CeEecccccccCCCCCCCCCCCCCC
Q psy6572 30 DCRPGYFKCDN-NKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 30 ~c~~~~f~C~n-~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
.|++++|+|.| ++|||..|+|||+.||.|||||.+|
T Consensus 3 ~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 39 (42)
T 1cr8_A 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39 (42)
T ss_dssp CSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTC
T ss_pred CCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCC
Confidence 56667777763 6777777777777777777777765
No 109
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.81 E-value=2.5e-09 Score=88.29 Aligned_cols=36 Identities=42% Similarity=0.998 Sum_probs=33.2
Q ss_pred CCCCCCceeeCCCCCeEcCcccccCCCCCCCCCCCc
Q psy6572 247 SECNLFEFRCNSTGQCIPITWVCDGVTDCIDKSDEH 282 (1416)
Q Consensus 247 ~~C~~~~F~C~~~~~CI~~~w~CDG~~DC~DgsDE~ 282 (1416)
..|.+.+|+|..+++|||..|+|||+.||.|||||.
T Consensus 5 ~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~ 40 (50)
T 2knx_A 5 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADES 40 (50)
T ss_dssp CTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGS
T ss_pred CCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCccc
Confidence 568899999965899999999999999999999994
No 110
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.80 E-value=3.1e-06 Score=99.14 Aligned_cols=202 Identities=14% Similarity=0.109 Sum_probs=132.7
Q ss_pred ccccceeeeeecCCCeEEEeeccC-CCccEEEEecC---CCCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTM-HGSSIRRSCNN---SQPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~-~~~~I~r~~l~---s~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
...+|..|+|++.++.||.+.... ..+.|..+.++ +..+.+.. ...|..|++ .++.||+++...+.|.+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 567888999999999999998741 11356555544 22333332 457888888 577899999888899988
Q ss_pred ecCC--Cce---EEEEcCC---------CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC-------------EE
Q psy6572 637 KLDG--RFR---KVLINKG---------LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP-------------KV 689 (1416)
Q Consensus 637 ~ldG--~~~---~vLi~~~---------l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r-------------~v 689 (1416)
+++. ... .++...+ ...|.+|+++|...+||+++.+.. .|....++.... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD-QIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT-EEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC-EEEEEEEcCCCCcccccceeecccccc
Confidence 8753 221 1221111 223578999999889999997654 677666664332 12
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecC-CCe
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWE-MKS 766 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~-~~~ 766 (1416)
+.......|++|++++..++||++....+.|..++++....+.+......+ .....|.+|++. +.+||+++.. .+.
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~-~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT-VNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS-SCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC-CCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 223345679999999877789999988889999888654443333211100 113457788884 4579999887 666
Q ss_pred eEEe
Q psy6572 767 IERC 770 (1416)
Q Consensus 767 I~~~ 770 (1416)
|...
T Consensus 284 i~v~ 287 (361)
T 3scy_A 284 VAIF 287 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 111
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.80 E-value=1.4e-09 Score=87.61 Aligned_cols=39 Identities=54% Similarity=1.130 Sum_probs=34.1
Q ss_pred CcCCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 157 KMNCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 157 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
...|+..+|+|.+|+|||..|+|||+.||.|| |||.+|+
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg-----SDE~~C~ 43 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDH-----SDEDDCP 43 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSS-----TTTSCC-
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCC-----ccccCCC
Confidence 35799999999999999999999999999999 9999884
No 112
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.79 E-value=7.7e-10 Score=91.46 Aligned_cols=39 Identities=49% Similarity=1.134 Sum_probs=36.5
Q ss_pred CcCCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 157 KMNCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 157 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
..+|++.+|+|.||+|||..|+|||+.||.|| |||.+|.
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~Dg-----SDE~~~~ 42 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDG-----SDEKNCN 42 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSC-----HHHHSCC
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCC-----Cccccch
Confidence 46799999999999999999999999999999 8998885
No 113
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.76 E-value=5.5e-09 Score=107.22 Aligned_cols=86 Identities=31% Similarity=0.761 Sum_probs=70.5
Q ss_pred CCc-ccccccCCC-CCCccc--ccceecCCceEEeeCCCceecCC-------CCCccccCCcCC--CCCcc--ceeeecC
Q psy6572 448 FSC-FVNECNVSH-GGQLCA--HECIDLKIGYKCACRKGYQVHPE-------DKHLCVDTNECL--DRPCS--HYCRNTL 512 (1416)
Q Consensus 448 ~~C-~i~eC~~~~-~~~~Cs--~~C~nt~~gy~C~C~~Gy~L~p~-------d~~tC~didEC~--~~~Cs--q~C~nt~ 512 (1416)
..| +|+||.... .. |. +.|++++++|+|.|++||.+.+. ++..|++|+||. ..+|. ++|+|+.
T Consensus 39 ~~C~dideC~~~~~~~--C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~ 116 (143)
T 2bou_A 39 ETCDDINECATLSKVS--CGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTV 116 (143)
T ss_dssp CCCEECCGGGC----C--CCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECS
T ss_pred CcCCccccccCCCCCC--CCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCC
Confidence 567 688996542 13 76 58999999999999999998622 145899999998 57897 6999999
Q ss_pred CeeeecCCCCcEEecCCCceEec
Q psy6572 513 GSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 513 gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
|+|+|.|++||++..++++|...
T Consensus 117 g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 117 GSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp SCEEEECCSSSCBCTTCCSSBTT
T ss_pred CCEEeeCCCCcccCCCCccCccC
Confidence 99999999999999998888765
No 114
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.76 E-value=3.7e-09 Score=82.86 Aligned_cols=36 Identities=44% Similarity=1.102 Sum_probs=27.2
Q ss_pred CCCCceecCC--CceeCCCcccCCCCCCCCCCcCcCCC
Q psy6572 1055 CDPTYFKCNN--YKCIPGSWHCDYDDDCGDGSDEKNCT 1090 (1416)
Q Consensus 1055 C~~~~f~C~~--~~Ci~~~~~CDg~~dC~dgsDE~~C~ 1090 (1416)
|.+.+|+|.+ ++|||.+|+|||..||.|||||.+|.
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 4566778876 77888888888888888888887764
No 115
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.75 E-value=2.5e-09 Score=87.85 Aligned_cols=38 Identities=42% Similarity=0.944 Sum_probs=29.4
Q ss_pred CccCCCcEEecCC-eEecccccccCCCCCCCCCCCCCCC
Q psy6572 29 RDCRPGYFKCDNN-KCILSSHTCNNINDCGDGSDEADCS 66 (1416)
Q Consensus 29 ~~c~~~~f~C~n~-~ci~~~~~Cdg~~dC~d~sDE~~C~ 66 (1416)
.+|++++|+|.|+ +||+..|+|||+.||.|||||.+|.
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCP 43 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSC
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCC
Confidence 5677778888877 7888888888888888888887773
No 116
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.75 E-value=7.7e-09 Score=106.42 Aligned_cols=77 Identities=27% Similarity=0.698 Sum_probs=65.1
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccccCCcCC--CCCcccee-eecCCeeeecCCCCcEE
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL--DRPCSHYC-RNTLGSYSCSCAPGYAL 525 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~--~~~Csq~C-~nt~gsy~C~C~~Gy~L 525 (1416)
++++|...+ |.+ .|++++++|+|.|++||. ++.|.++++|. +++|.+.| +|+.|+|+|.|++||.|
T Consensus 47 dideC~~~p----C~n~g~C~~~~~~y~C~C~~G~~-----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l 117 (146)
T 1x7a_L 47 DGDQCEPNP----CLNGGLCKDDINSYECWCQVGFE-----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRL 117 (146)
T ss_dssp ---CCSSCS----SCTTCEEEECSSCEEEECCSSEE-----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEE
T ss_pred CcCcCCCCC----CCCCCEeECCCCCEEEecCCCCc-----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEe
Confidence 466775433 765 799999999999999995 56899999998 46899999 99999999999999999
Q ss_pred ecCCCceEecC
Q psy6572 526 LSDKHGCKATS 536 (1416)
Q Consensus 526 ~~dg~sC~a~~ 536 (1416)
..+|++|..+.
T Consensus 118 ~~dG~~C~~~~ 128 (146)
T 1x7a_L 118 APDQKSCKPAV 128 (146)
T ss_dssp CTTSSSEEECS
T ss_pred CCCCCcCCCCC
Confidence 99999998864
No 117
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.75 E-value=3.8e-09 Score=82.78 Aligned_cols=36 Identities=47% Similarity=1.153 Sum_probs=33.4
Q ss_pred CCCCCcccCC--CceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 160 CSGDKFLCRN--GNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 160 C~~~~f~C~~--g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
|++.+|+|.+ |+|||.+|+|||..||.|| |||.+|+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dg-----sDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSG-----EDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTT-----TTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCC-----cccccCC
Confidence 6678999997 9999999999999999999 9999884
No 118
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.74 E-value=9.4e-07 Score=106.69 Aligned_cols=231 Identities=11% Similarity=0.076 Sum_probs=144.3
Q ss_pred CCeEEEEec------EEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccC-------CCccEEEEecCCCC-
Q psy6572 539 PPNLLFTNK------YYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTM-------HGSSIRRSCNNSQP- 602 (1416)
Q Consensus 539 ~~~li~s~~------~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~-------~~~~I~r~~l~s~~- 602 (1416)
...+|+++. ..|..|++.... ..+..+ ..| +|++++.+++||+++... ....|.+++..+..
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 346777775 688888887765 222222 356 999999999999998521 01367777666321
Q ss_pred -eEE-ee-------cCCCceEEEEccCCcEEEeeCC-CCeEEEeecCCCce-EEEEcCC--CCCcce----ee-------
Q psy6572 603 -ELL-FP-------ATSPDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRFR-KVLINKG--LQEPRG----IA------- 658 (1416)
Q Consensus 603 -~~l-~~-------l~~p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~~-~vLi~~~--l~~P~g----Ia------- 658 (1416)
..| +. ...|.+|+|++.+++||+++.. .+.|.++++..... ..|...+ ...|.+ ++
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~ 241 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSL 241 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCE
Confidence 112 11 2479999999999999999875 67888888764332 2221110 001111 22
Q ss_pred ------------------------------ecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCC---------CCCe
Q psy6572 659 ------------------------------LNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNL---------SWPN 699 (1416)
Q Consensus 659 ------------------------------vDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l---------~~P~ 699 (1416)
+.+..+.|||+... .+|.++++.+....++....+ ..|.
T Consensus 242 ~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~--g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 242 ARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT--GKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp EEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT--SEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC--CcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 24444445554422 356666666544333211001 1244
Q ss_pred e---EEeecCCCeEEEecCC---------CCeEEEEeCCC-CceEEEEeccCCCCcccccceeEEEe--cC-cEEEeecC
Q psy6572 700 A---LTISYETNELFWGDAH---------EDYIAVSDLNG-ENIKIIVSRRMDPTINLHHVFALAVF--ED-HLFWTDWE 763 (1416)
Q Consensus 700 g---LaiD~~~~rLYWtD~~---------~~~I~~~~ldG-~~r~~v~~~~~~p~~~l~~P~~lav~--~d-~LYwtD~~ 763 (1416)
| |++++..++||++... .+.|..+++.. +..+.|..+ ..|.+|++. +. +||.+.+.
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--------~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--------HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--------EEECEEEECCSSSCEEEEEETT
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--------CCcCeEEEccCCCEEEEEEcCC
Confidence 5 8999989999999642 34799998754 333333221 259999985 45 79999999
Q ss_pred CCeeEEecccCCCceEEE
Q psy6572 764 MKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 764 ~~~I~~~nk~tG~~~~~l 781 (1416)
.+.|..++..+++....+
T Consensus 392 s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 999999998888876665
No 119
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.74 E-value=1.6e-09 Score=107.42 Aligned_cols=66 Identities=32% Similarity=0.841 Sum_probs=59.3
Q ss_pred ccccceecCCceEEeeCCCceecCCCCCccccCCcCC-CCCccceeeecCCeeeecCCCCcEEecC-CCce
Q psy6572 464 CAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL-DRPCSHYCRNTLGSYSCSCAPGYALLSD-KHGC 532 (1416)
Q Consensus 464 Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~-~~~Csq~C~nt~gsy~C~C~~Gy~L~~d-g~sC 532 (1416)
|.+.|++ .++|+|.|++||.+. . ++.|++||||+ .++|.+.|+|+.|+|+|.|++||++..+ +++|
T Consensus 51 C~~~C~~-~~~y~C~C~~Gy~~~-~-g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 51 CPADCDP-NTQASCECPEGYILD-D-GFICTDIDECENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp EECEECT-TSTTCEECCTTEEEE-T-TTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCCcccC-CCCeEeECCCCccCC-C-CCccccccccCCCCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 8888988 589999999999987 3 78999999998 4899889999999999999999998877 6665
No 120
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.74 E-value=2.6e-09 Score=87.44 Aligned_cols=37 Identities=38% Similarity=0.980 Sum_probs=28.1
Q ss_pred CccCCCcEEec-----CCeEecccccccCCCCCCCCCCCCCC
Q psy6572 29 RDCRPGYFKCD-----NNKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 29 ~~c~~~~f~C~-----n~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
..|++++|+|. +++|||.+|+|||+.||.|||||.+|
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C 46 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 46 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCC
Confidence 46777788887 67788888888888888888888765
No 121
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.73 E-value=5.3e-07 Score=104.00 Aligned_cols=197 Identities=13% Similarity=0.029 Sum_probs=134.5
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEE-ee-cC-------CCceEEE---EccCCcEEE-eeC----
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELL-FP-AT-------SPDGLTV---DWVGRNLYW-CDK---- 628 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l-~~-l~-------~p~gLAv---D~~~~~LYw-tD~---- 628 (1416)
..|.+++||...+++|+++... +.|.++... +..+.+ +. +. .|.||.+ |+. +.|++ ++.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~--g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af 89 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYK--GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF 89 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTT--TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred cCCcCccCcCCCCEEEEEeccC--CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence 4588999999999999999885 489999887 333333 21 22 4679999 676 77777 552
Q ss_pred --------CCCeEEEeecC----CCceEEEE-c----C-------CCCCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 629 --------GLDTIEVAKLD----GRFRKVLI-N----K-------GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 629 --------~~~~I~v~~ld----G~~~~vLi-~----~-------~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
+...|.+.+|+ |+....+- . . ....|.+||||+. |.+|+++....+.|.|++.||
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEEeCCC
Confidence 35679999998 54433222 1 1 2234889999986 999999964326899999999
Q ss_pred CCCEEEeec-----CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEec-cCCCCcccccceeE-EE-ecCc
Q psy6572 685 SNPKVIISK-----NLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSR-RMDPTINLHHVFAL-AV-FEDH 756 (1416)
Q Consensus 685 s~r~vlv~~-----~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~-~~~p~~~l~~P~~l-av-~~d~ 756 (1416)
+...++... ....|+||++.+....|+.++. .++|.++++.-..+..|... .+.. ..+..|.+| ++ +++.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCC-CCCTTEEEEEEEEETTE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCc-ccccCcccccccccCCE
Confidence 965554432 2344789999988889999998 89999999884322112211 0001 136778885 55 6777
Q ss_pred E-EEeecCCCeeEE
Q psy6572 757 L-FWTDWEMKSIER 769 (1416)
Q Consensus 757 L-YwtD~~~~~I~~ 769 (1416)
| |+++...+.+..
T Consensus 247 vllV~~~~~~~~~l 260 (334)
T 2p9w_A 247 SVLVGARAPYAISF 260 (334)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 6 888876654433
No 122
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.73 E-value=2.4e-09 Score=86.23 Aligned_cols=39 Identities=44% Similarity=1.096 Sum_probs=34.8
Q ss_pred CccCCCCCceecCCCCceecCcccccCCCCCCCCCCCCCCcc
Q psy6572 203 STCKANNNVFQCDNNKTCISKSWVCDGTYDCTDRSDENSTYC 244 (1416)
Q Consensus 203 ~~C~~~~~~F~C~~~~~CI~~~w~CDg~~DC~D~sDE~~~~c 244 (1416)
.+|.+ ++|+| .+++|||..|+|||+.||+|+|||..+.|
T Consensus 3 ~~C~~--~~F~C-~~g~CI~~~~~CDg~~DC~DgSDE~~~~C 41 (44)
T 1j8e_A 3 HSCSS--TQFKC-NSGRCIPEHWTCDGDNDCGDYSDETHANC 41 (44)
T ss_dssp SSSCT--TEEEC-TTSCEEEGGGTTSSSCCSSSSGGGSHHHH
T ss_pred CCCCC--CceEe-CCCCeEecCcccCCCCCCCCCCCCCCccc
Confidence 46777 99999 78999999999999999999999987444
No 123
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.73 E-value=3.1e-09 Score=86.93 Aligned_cols=39 Identities=41% Similarity=1.044 Sum_probs=34.7
Q ss_pred CcCCCCCCcccC-----CCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 157 KMNCSGDKFLCR-----NGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 157 ~~~C~~~~f~C~-----~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
..+|++.+|+|. +|+|||.+|+|||+.||.|| |||.+|+
T Consensus 4 ~~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~Dg-----SDE~~C~ 47 (47)
T 1k7b_A 4 FGSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDG-----RDEWGCG 47 (47)
T ss_dssp --CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSS-----TTTGGGC
T ss_pred CCCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCC-----cccCCCC
Confidence 356999999998 89999999999999999999 9999883
No 124
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.72 E-value=2.9e-09 Score=85.77 Aligned_cols=38 Identities=42% Similarity=0.886 Sum_probs=31.5
Q ss_pred CCccCCCcEEecCCeEecccccccCCCCCCCCCCCCCC
Q psy6572 28 MRDCRPGYFKCDNNKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 28 ~~~c~~~~f~C~n~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
...|++++|+|.|++|||..|+|||+.||.|||||.+|
T Consensus 2 ~~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 2 SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp CSSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 34688888888888888888888888888888888765
No 125
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.71 E-value=7e-09 Score=106.95 Aligned_cols=44 Identities=34% Similarity=0.746 Sum_probs=39.2
Q ss_pred CCccccCCcCC--CCCccc-eeeecCCeeeecCCCCcEEecCCCceE
Q psy6572 490 KHLCVDTNECL--DRPCSH-YCRNTLGSYSCSCAPGYALLSDKHGCK 533 (1416)
Q Consensus 490 ~~tC~didEC~--~~~Csq-~C~nt~gsy~C~C~~Gy~L~~dg~sC~ 533 (1416)
++.|++||||+ +++|.+ +|+|+.|+|+|.|++||++..++++|+
T Consensus 101 g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 101 GTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred CCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 66788999997 567986 899999999999999999999999884
No 126
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.68 E-value=8.4e-07 Score=104.43 Aligned_cols=193 Identities=15% Similarity=0.061 Sum_probs=125.0
Q ss_pred cceeeeeecCCCeEEEeec------c----CCCccEEEEecC-C--CCeEEee--------cCCCceEEEEcc---CCcE
Q psy6572 568 NAVGLDFDWVDNCLYWSDV------T----MHGSSIRRSCNN-S--QPELLFP--------ATSPDGLTVDWV---GRNL 623 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~------~----~~~~~I~r~~l~-s--~~~~l~~--------l~~p~gLAvD~~---~~~L 623 (1416)
.+..|++++ ++.+|.+-. . ...++|+++.++ . ..+.|.- ...|.||.+... +.+|
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 455566554 456666531 0 012467777776 1 2222211 248999999663 3479
Q ss_pred EEeeCC--CCeEEEeecCCC-ceEEEEc----CCCCCcceeeecCCcceEEEeeCC----------------CCceEEEE
Q psy6572 624 YWCDKG--LDTIEVAKLDGR-FRKVLIN----KGLQEPRGIALNPAYGYMYWTDWG----------------QNAHIGKA 680 (1416)
Q Consensus 624 YwtD~~--~~~I~v~~ldG~-~~~vLi~----~~l~~P~gIavDp~~g~LYWtD~g----------------~~~~I~ra 680 (1416)
|+++.. ..+|++..++-. ...+++. ..+..|+.+++++. |.+|+++.. ...+|+|.
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 999987 457777766532 2333332 46788999999987 777766531 12468887
Q ss_pred ecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCc----eEEEEeccCCCCcccccceeEEEec--
Q psy6572 681 KMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGEN----IKIIVSRRMDPTINLHHVFALAVFE-- 754 (1416)
Q Consensus 681 ~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~----r~~v~~~~~~p~~~l~~P~~lav~~-- 754 (1416)
+. | ..+ ++..++..||||++++.+++||++|...++|++.++++.. ++++ .. -..|.+|++..
T Consensus 209 d~-~-~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~-------~g~PDGi~vD~e~ 277 (355)
T 3sre_A 209 SP-N-DVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF-------DTLVDNISVDPVT 277 (355)
T ss_dssp CT-T-CCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC-------SSEEEEEEECTTT
T ss_pred EC-C-eEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC-------CCCCceEEEeCCC
Confidence 65 2 333 4456789999999999888999999999999999986422 2233 21 35799999974
Q ss_pred CcEEEee-cCCCeeEEeccc
Q psy6572 755 DHLFWTD-WEMKSIERCDKY 773 (1416)
Q Consensus 755 d~LYwtD-~~~~~I~~~nk~ 773 (1416)
+.||++. |...+|.+.+..
T Consensus 278 G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 278 GDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp CCEEEEEESCHHHHHSCCTT
T ss_pred CcEEEEecCCceEEEEECCC
Confidence 7888855 666666665443
No 127
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.68 E-value=5.3e-09 Score=85.89 Aligned_cols=38 Identities=39% Similarity=0.872 Sum_probs=33.0
Q ss_pred CCCCCceecCCC-ceeCCCcccCCCCCCCCCCcCcCCCC
Q psy6572 1054 TCDPTYFKCNNY-KCIPGSWHCDYDDDCGDGSDEKNCTP 1091 (1416)
Q Consensus 1054 ~C~~~~f~C~~~-~Ci~~~~~CDg~~dC~dgsDE~~C~~ 1091 (1416)
+|.+.+|+|.++ +|||.+|+|||+.||.|||||.+|..
T Consensus 6 ~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~~ 44 (48)
T 2i1p_A 6 NCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPT 44 (48)
T ss_dssp CCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSCS
T ss_pred CCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCCC
Confidence 588889999888 79999999999999999999988864
No 128
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.66 E-value=2.2e-06 Score=100.96 Aligned_cols=161 Identities=14% Similarity=0.102 Sum_probs=108.3
Q ss_pred cEEEEEEecCCc---c-eEEecc------cccceeeeeecC---CCeEEEeeccCCCccEEEEecC--CCCeEEee----
Q psy6572 547 KYYIREVTQAGV---M-TIRIHN------QTNAVGLDFDWV---DNCLYWSDVTMHGSSIRRSCNN--SQPELLFP---- 607 (1416)
Q Consensus 547 ~~~I~~i~l~g~---~-~~~~~~------l~~~~~l~~D~~---~~~LYwtD~~~~~~~I~r~~l~--s~~~~l~~---- 607 (1416)
...|.+++++.. . .+.+.+ .-+|.||++... +.+||+++....+.+|..+.++ +...+++.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 446777877632 1 333333 247999998662 3369999877434565555554 44444333
Q ss_pred --cCCCceEEEEccCCcEEEeeC-----------------CCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEE
Q psy6572 608 --ATSPDGLTVDWVGRNLYWCDK-----------------GLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYW 668 (1416)
Q Consensus 608 --l~~p~gLAvD~~~~~LYwtD~-----------------~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYW 668 (1416)
+..|+++++|. .+.+|+++. ..++|++.+.. ..+++ ..++..|+|||+.|...+||+
T Consensus 162 ~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~-~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 162 KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVV-AEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp TTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEE-EEEESSEEEEEECTTSSEEEE
T ss_pred CCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEe-ecCCcccCcceECCCCCEEEE
Confidence 77899999997 466766654 13467777663 33344 367899999999999999999
Q ss_pred eeCCCCceEEEEecCCCC----CEEEeecCCCCCeeEEeecCCCeEEEec
Q psy6572 669 TDWGQNAHIGKAKMDGSN----PKVIISKNLSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 669 tD~g~~~~I~ra~mDGs~----r~vlv~~~l~~P~gLaiD~~~~rLYWtD 714 (1416)
+|... .+|++.++++.. ++++ . ....|.||++|..+++||++.
T Consensus 238 adt~~-~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 238 AELLA-HKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEGGG-TEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEE
T ss_pred EeCCC-CeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEe
Confidence 99654 489999987543 2233 2 246799999996458998854
No 129
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.66 E-value=9.6e-07 Score=99.75 Aligned_cols=164 Identities=13% Similarity=0.101 Sum_probs=114.8
Q ss_pred CCceEEEEccCCcEEEeeC--CCCeEEEeecC-CCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 610 SPDGLTVDWVGRNLYWCDK--GLDTIEVAKLD-GRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~--~~~~I~v~~ld-G~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
.|.||+++.. +.||.+.. +..+|.++++. |+....+.......+.||+++ .++||++.|..+ .|.+.+.. .
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~-~v~viD~~--t 95 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN-IGFIYDRR--T 95 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS-EEEEEETT--T
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC-EEEEEECC--C
Confidence 4689999965 79999975 46799999987 444444433344455677776 579999999765 78887775 2
Q ss_pred CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCc-eEEEEeccCCCCcccccceeEEEecCcEEEeecCCC
Q psy6572 687 PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGEN-IKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMK 765 (1416)
Q Consensus 687 r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~-r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~ 765 (1416)
.+++-.-....|.|+.|.+..++||.++ ..+.|..++..... .+.|..+.. ...+..|..|.+.+++||.+.|.++
T Consensus 96 ~~v~~~i~~g~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~--~~p~~~~nele~~dg~lyvn~~~~~ 172 (266)
T 2iwa_A 96 LSNIKNFTHQMKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYN--GHRVIRLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp TEEEEEEECCSSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEET--TEECCCEEEEEEETTEEEEEETTSS
T ss_pred CcEEEEEECCCCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCC--CcccccceeEEEECCEEEEecCCCC
Confidence 3333221111355555555589999999 68899999986643 344433210 1124568888888899999999999
Q ss_pred eeEEecccCCCceEEEE
Q psy6572 766 SIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 766 ~I~~~nk~tG~~~~~l~ 782 (1416)
.|.+++..+|+....+-
T Consensus 173 ~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 173 CIARISAKDGTLLGWIL 189 (266)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEEEE
Confidence 99999999998776664
No 130
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.63 E-value=1.5e-05 Score=94.90 Aligned_cols=215 Identities=12% Similarity=0.035 Sum_probs=139.5
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEE
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV 645 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v 645 (1416)
..|.++++++.+++||++.... ...|..++ .+. +++.. +..|..+.+.+.++++|++....+++.++++.|+...+
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~ 201 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGG-SSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGA 201 (373)
T ss_pred CCccceEECCCCCEEEEEecCC-CCeEEEEE-CCC-CEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEE
Confidence 4577899999999999997642 13788888 632 34444 55566677777788899998888888888884443322
Q ss_pred EEc-C--CCCCcc--eeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec---------CCCCCee---EEeecCCC
Q psy6572 646 LIN-K--GLQEPR--GIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK---------NLSWPNA---LTISYETN 708 (1416)
Q Consensus 646 Li~-~--~l~~P~--gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~---------~l~~P~g---LaiD~~~~ 708 (1416)
+.. . ....|. ..++.+..+.+||+.. ...|.++++.+...+++..- ....|.| +++++..+
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~ 279 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWPVY--SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEEcC--CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC
Confidence 110 0 111231 1233445567777663 24788888876544432211 1113655 88998889
Q ss_pred eEEEecC---------CCCeEEEEeCCCCce-EEEEeccCCCCcccccceeEEEe--cC-cEEEeecCCCeeEEecccCC
Q psy6572 709 ELFWGDA---------HEDYIAVSDLNGENI-KIIVSRRMDPTINLHHVFALAVF--ED-HLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 709 rLYWtD~---------~~~~I~~~~ldG~~r-~~v~~~~~~p~~~l~~P~~lav~--~d-~LYwtD~~~~~I~~~nk~tG 775 (1416)
+||++.. ..+.|..+++....+ +.|.. -..|.+|++. +. .||.+.+..+.|..++..++
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--------g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--------GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--------CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9999754 235799998865443 33422 1358888885 44 68888888999999998888
Q ss_pred CceEEEEeCCCCCCeeeeee
Q psy6572 776 KNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 776 ~~~~~l~~~~~~~p~~I~v~ 795 (1416)
+....++ ..-..|.+|.++
T Consensus 352 ~vv~~i~-~vG~~P~~~~~~ 370 (373)
T 2mad_H 352 DQDQSTV-ELGSGPQVLSVM 370 (373)
T ss_pred CEEeeec-CCCCCCcEEEEc
Confidence 7766644 445668777765
No 131
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.62 E-value=4.2e-07 Score=111.14 Aligned_cols=154 Identities=14% Similarity=0.184 Sum_probs=111.3
Q ss_pred eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecC-CCceEEEE-cCC------CCCcceeeecCC---cceEEEee
Q psy6572 603 ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRFRKVLI-NKG------LQEPRGIALNPA---YGYMYWTD 670 (1416)
Q Consensus 603 ~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~~~vLi-~~~------l~~P~gIavDp~---~g~LYWtD 670 (1416)
++|+. |..|.+||+++. +.||+++...++|.+++.. |....++. ... ...+.|||++|. +++||++.
T Consensus 20 ~~~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 45555 889999999985 5799999887789998875 55433322 222 234559999997 89999998
Q ss_pred CC-------C----CceEEEEecCCC-----CCEEEee----cCCCCCeeEEeecCCCeEEEecC---------------
Q psy6572 671 WG-------Q----NAHIGKAKMDGS-----NPKVIIS----KNLSWPNALTISYETNELFWGDA--------------- 715 (1416)
Q Consensus 671 ~g-------~----~~~I~ra~mDGs-----~r~vlv~----~~l~~P~gLaiD~~~~rLYWtD~--------------- 715 (1416)
.. . ..+|.|+.+++. .+++|+. ....++.+|++++ .++||++-.
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~ 177 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQ 177 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccc
Confidence 42 1 358999998753 2345553 2356789999996 779999832
Q ss_pred -----------------CCCeEEEEeCCCC-----------ceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCC
Q psy6572 716 -----------------HEDYIAVSDLNGE-----------NIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMK 765 (1416)
Q Consensus 716 -----------------~~~~I~~~~ldG~-----------~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~ 765 (1416)
..++|.|++.||+ ..+++.. . +.+|++|++. .+.||+++....
T Consensus 178 ~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~-G------~RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 178 AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL-G------HRNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB-C------CSEEEEEEECTTSCEEEEEECSS
T ss_pred cccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE-C------CCCcceEEECCCCCEEEEecCCC
Confidence 1468999999998 3344433 3 8999999996 578999997654
No 132
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.60 E-value=5.1e-09 Score=85.72 Aligned_cols=37 Identities=38% Similarity=0.980 Sum_probs=22.9
Q ss_pred CccCCCcEEec-----CCeEecccccccCCCCCCCCCCCCCC
Q psy6572 29 RDCRPGYFKCD-----NNKCILSSHTCNNINDCGDGSDEADC 65 (1416)
Q Consensus 29 ~~c~~~~f~C~-----n~~ci~~~~~Cdg~~dC~d~sDE~~C 65 (1416)
..|++++|+|. +++|||..|+|||+.||.|||||.+|
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C 44 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 44 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccC
Confidence 34566666665 45666666666666666666666554
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.59 E-value=1.4e-05 Score=100.01 Aligned_cols=225 Identities=8% Similarity=-0.083 Sum_probs=150.0
Q ss_pred CeEEEEe--cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee---cCCC
Q psy6572 540 PNLLFTN--KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP---ATSP 611 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~---l~~p 611 (1416)
..+|+++ ...|+.+++.... ..+..+. .+.+++|++.++.||.++.. ..|..+++. ...+++.. ...|
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~~~~~i~~g~~p 224 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPTKVAEIKIGIEA 224 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCEEEEEEECCSEE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC---CeEEEEECcCCCCcEEEEEecCCCc
Confidence 3566665 3467777765544 2222232 37899999999999999876 389999884 22233332 5679
Q ss_pred ceEEEEc----cCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCC----------CCCcceeeecCCcceEEEeeCCCCce
Q psy6572 612 DGLTVDW----VGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKG----------LQEPRGIALNPAYGYMYWTDWGQNAH 676 (1416)
Q Consensus 612 ~gLAvD~----~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~----------l~~P~gIavDp~~g~LYWtD~g~~~~ 676 (1416)
++|||++ .++.||.+....++|.+.+..... ..+|...+ ..+|.+|++.|..+++|++.... .+
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~-g~ 303 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET-GK 303 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT-TE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC-Ce
Confidence 9999999 899999999888899998865433 33333211 12577999999989999887544 48
Q ss_pred EEEEecCCCC-CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccce-eEEEe-
Q psy6572 677 IGKAKMDGSN-PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVF-ALAVF- 753 (1416)
Q Consensus 677 I~ra~mDGs~-r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~-~lav~- 753 (1416)
|..+++.... ..+.....-.+|.++++++..++||.+....+.|..+++........+... ..+||. ++.++
T Consensus 304 i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g-----~~ph~g~g~~~~~ 378 (543)
T 1nir_A 304 VLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG-----KTPHPGRGANFVH 378 (543)
T ss_dssp EEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS-----SSBCCTTCEEEEE
T ss_pred EEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC-----CCCCCCCCcccCC
Confidence 8888876433 221111234679999999887889999888889999997544333333321 255663 44443
Q ss_pred --cCcEEEeec-CCCeeEEecccC
Q psy6572 754 --EDHLFWTDW-EMKSIERCDKYT 774 (1416)
Q Consensus 754 --~d~LYwtD~-~~~~I~~~nk~t 774 (1416)
.+.+|.|.. ..++|..++..+
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCccEEEeccCCCceEEEEEeCC
Confidence 367877765 457777776555
No 134
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.58 E-value=2e-08 Score=107.68 Aligned_cols=77 Identities=31% Similarity=0.744 Sum_probs=37.0
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCcccc-C-CcCC--CCCccceeeecCCeeeecCCCCcE
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVD-T-NECL--DRPCSHYCRNTLGSYSCSCAPGYA 524 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d-i-dEC~--~~~Csq~C~nt~gsy~C~C~~Gy~ 524 (1416)
++++|...+ |.+ .|++++++|+|.|++||. +..|.+ + ++|. +++|.+.|+|+.|+|+|.|++||.
T Consensus 41 dideC~~~p----C~ngg~C~n~~g~y~C~C~~Gf~-----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 41 DGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFE-----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp -------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred CCcccCCCC----CCCCCEeECCCCCeeEeCCCCce-----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCce
Confidence 567776433 766 799999999999999995 567987 6 8998 478999999999999999999999
Q ss_pred EecCCCceEecC
Q psy6572 525 LLSDKHGCKATS 536 (1416)
Q Consensus 525 L~~dg~sC~a~~ 536 (1416)
|..+|++|....
T Consensus 112 l~~dG~~C~~~~ 123 (195)
T 1nfu_B 112 LADNGKACIPTG 123 (195)
T ss_dssp ECTTSSCEEESS
T ss_pred eCCCCCccccCC
Confidence 999999999874
No 135
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.58 E-value=2.3e-08 Score=101.42 Aligned_cols=77 Identities=31% Similarity=0.744 Sum_probs=36.7
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCcccc-C-CcCC--CCCccceeeecCCeeeecCCCCcE
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVD-T-NECL--DRPCSHYCRNTLGSYSCSCAPGYA 524 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d-i-dEC~--~~~Csq~C~nt~gsy~C~C~~Gy~ 524 (1416)
++++|...+ |.+ .|++++++|+|.|++||. +..|.+ + ++|. +++|.+.|+++.|+|+|.|++||+
T Consensus 41 d~d~C~~~p----C~n~g~C~~~~~~y~C~C~~G~~-----G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 41 DGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFE-----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp -------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred CcCcCCCCC----CCCcCCcccCCCCEEeeCCCCcc-----CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcE
Confidence 566775433 765 799999999999999995 567988 6 8997 468999999999999999999999
Q ss_pred EecCCCceEecC
Q psy6572 525 LLSDKHGCKATS 536 (1416)
Q Consensus 525 L~~dg~sC~a~~ 536 (1416)
|..+|++|..+.
T Consensus 112 l~~~g~~C~~~~ 123 (134)
T 2vh0_B 112 LADNGKACIPTG 123 (134)
T ss_dssp ECTTSSCEEESS
T ss_pred ECCCCCccCcCC
Confidence 999999998764
No 136
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.58 E-value=4.8e-08 Score=96.19 Aligned_cols=66 Identities=36% Similarity=0.868 Sum_probs=57.6
Q ss_pred cceecCCceEEeeCCCceecCCCCCccccC---CcCC--CCCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 467 ECIDLKIGYKCACRKGYQVHPEDKHLCVDT---NECL--DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p~d~~tC~di---dEC~--~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
.|++++++|+|.|++||.. ..|+++ +||. +++|+++|+|+.|+|+|.|++||+|..++++|+....
T Consensus 27 ~C~~~~~~y~C~C~~G~~G-----~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 27 TCIDGIGSFSCDCRSGWEG-----RFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp EECCCSSCCCEEECTTEES-----TTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred CCCCCCCCcEeeCCCCCcC-----CCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc
Confidence 6899999999999999963 358875 4697 5789999999999999999999999999999987643
No 137
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.57 E-value=1.1e-08 Score=83.75 Aligned_cols=38 Identities=42% Similarity=1.114 Sum_probs=35.1
Q ss_pred cCCCCCCcccC-----CCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 158 MNCSGDKFLCR-----NGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 158 ~~C~~~~f~C~-----~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
..|+..+|+|. +++|||.+|+|||+.||.|| |||.+|+
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~Dg-----SDE~~C~ 45 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDG-----RDEWGCG 45 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSS-----CTTHHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCC-----cccccCC
Confidence 46999999998 79999999999999999999 9998884
No 138
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.57 E-value=1.3e-06 Score=100.84 Aligned_cols=162 Identities=10% Similarity=0.013 Sum_probs=118.2
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCC-------CCcceeee---cCCcceEEE-eeCC----
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGL-------QEPRGIAL---NPAYGYMYW-TDWG---- 672 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l-------~~P~gIav---Dp~~g~LYW-tD~g---- 672 (1416)
...|++++.|...+.||+++...++|.+.++++.....+.-..+ ..|.||.+ ||. |+||+ ++.+
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 45799999999999999999999999999998654444432332 25789999 788 88877 4521
Q ss_pred -------CCceEEEEecC----CCCCEEEeec------------CCCCCeeEEeecCCCeEEEecCCC-CeEEEEeCCCC
Q psy6572 673 -------QNAHIGKAKMD----GSNPKVIISK------------NLSWPNALTISYETNELFWGDAHE-DYIAVSDLNGE 728 (1416)
Q Consensus 673 -------~~~~I~ra~mD----Gs~r~vlv~~------------~l~~P~gLaiD~~~~rLYWtD~~~-~~I~~~~ldG~ 728 (1416)
....|.+.+++ |.....+-.. ....|++|++|. .+++|++++.. +.|.+++.+|+
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC
Confidence 12478999999 4433333211 233589999995 89999999998 99999999999
Q ss_pred ceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEeccc
Q psy6572 729 NIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 729 ~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~ 773 (1416)
....+.... ++......+.||++. +..|++++. .++|++++..
T Consensus 170 ~~~~~~~~~-~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 170 TVSTFAWES-GNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp CEEEEEECC-CCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred EEeeeeecC-CCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 666554322 122234567899997 456777777 8999998865
No 139
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.57 E-value=1.6e-05 Score=88.16 Aligned_cols=195 Identities=19% Similarity=0.057 Sum_probs=127.9
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-e
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-R 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~ 643 (1416)
....||.|+. ++||.+......+.|+++.+.+ +...-+. ...+.|..+...+++||.+.+..++|.+.++.... .
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3456899975 7999987765446899998883 3222222 33454444444589999999999999999986543 3
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE--EEeec---CCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK--VIISK---NLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~--vlv~~---~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
..+-.. ..+.||+ +..++||.+| + ..+|...+....... +-+.. .+..++.|.. .+++||...|..+
T Consensus 99 ~ti~~~--~~Gwglt--~dg~~L~vSd-g-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~--~~G~lyanvw~s~ 170 (243)
T 3mbr_X 99 ARFRYP--GEGWALT--SDDSHLYMSD-G-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW--VNGELLANVWLTS 170 (243)
T ss_dssp EEEECS--SCCCEEE--ECSSCEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE--ETTEEEEEETTTT
T ss_pred EEEeCC--CCceEEe--eCCCEEEEEC-C-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE--eCCEEEEEECCCC
Confidence 444322 2344554 5678999999 5 457888776543322 22221 2445566654 5899999999999
Q ss_pred eEEEEeC-CCCceEEEEeccCCCCc------ccccceeEEEe--cCcEEEeecCCCeeEEec
Q psy6572 719 YIAVSDL-NGENIKIIVSRRMDPTI------NLHHVFALAVF--EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 719 ~I~~~~l-dG~~r~~v~~~~~~p~~------~l~~P~~lav~--~d~LYwtD~~~~~I~~~n 771 (1416)
.|.+++. +|.-...|-.....+.. ...-|.|||+. +++||+|-..-.+++.+.
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 9999997 55555555443221111 12467899996 578999987777777663
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.56 E-value=1.7e-05 Score=90.63 Aligned_cols=217 Identities=9% Similarity=-0.033 Sum_probs=133.7
Q ss_pred cEEEEEEecCCcc-eEEecccc---cceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cC------CCceE
Q psy6572 547 KYYIREVTQAGVM-TIRIHNQT---NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-AT------SPDGL 614 (1416)
Q Consensus 547 ~~~I~~i~l~g~~-~~~~~~l~---~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~------~p~gL 614 (1416)
...|+.+++.... ...+.... .+.+++|++.++.||++.... ..|+++.+.+ .....+. .. .|.+|
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS--ESLVKIDLVTGETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT--TEEEEEETTTCCEEEEEECCBTTEEEECTTCE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC--CeEEEEECCCCCeEeeEEcCCcccccccccce
Confidence 4467777765544 11122122 488999999988999998764 4788888873 3222222 22 78999
Q ss_pred EEEccCCcEEEeeC-----------CCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 615 TVDWVGRNLYWCDK-----------GLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 615 AvD~~~~~LYwtD~-----------~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
++++.++.||++.. ..+.|.+.++.+......+.. ...|.+|+++|...+||+++ ..|.+.++.
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~----~~i~~~d~~ 162 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG----RDLHVMDPE 162 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES----SSEEEEETT
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC----CeEEEEECC
Confidence 99999999999962 347899999876543333322 45699999999988898884 134444433
Q ss_pred CCCCEEE------------------------------------------------------ee------------cCCCC
Q psy6572 684 GSNPKVI------------------------------------------------------IS------------KNLSW 697 (1416)
Q Consensus 684 Gs~r~vl------------------------------------------------------v~------------~~l~~ 697 (1416)
....... +. .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 2111100 00 01124
Q ss_pred CeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCC
Q psy6572 698 PNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
|.+|++++..++||.+ .+.|..+++........+.. -..|.++++. +.+||.+ ...+.|...+..++
T Consensus 243 ~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPL-------PHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETL 311 (337)
T ss_dssp EEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEEC-------SSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTC
T ss_pred eeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecC-------CCceeeEEECCCCCEEEEE-cCCCcEEEEECcCC
Confidence 5567777766677777 36777777755433333321 2357788875 3457776 44677877776666
Q ss_pred CceEEE
Q psy6572 776 KNCTSV 781 (1416)
Q Consensus 776 ~~~~~l 781 (1416)
+....+
T Consensus 312 ~~~~~~ 317 (337)
T 1pby_B 312 EKKGQV 317 (337)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 554444
No 141
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.56 E-value=1.4e-05 Score=94.90 Aligned_cols=248 Identities=10% Similarity=0.098 Sum_probs=148.5
Q ss_pred ecCCCCCeEEEEec-----------EEEEEEecCCcc---eEEecc------cccceeeeeecCCCeEEEeeccCCCccE
Q psy6572 534 ATSDVPPNLLFTNK-----------YYIREVTQAGVM---TIRIHN------QTNAVGLDFDWVDNCLYWSDVTMHGSSI 593 (1416)
Q Consensus 534 a~~~~~~~li~s~~-----------~~I~~i~l~g~~---~~~~~~------l~~~~~l~~D~~~~~LYwtD~~~~~~~I 593 (1416)
+.++...+||+++. ..|..++..... ++.+.. ...|.+++|++.+++||+++... ...|
T Consensus 84 a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-~~~V 162 (386)
T 3sjl_D 84 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-APAV 162 (386)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-SCEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC-CCeE
Confidence 33344556777762 357788776655 333332 23688999999999999998642 1378
Q ss_pred EEEecCCCCeEEeecCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCC----CCcce--eeecCCcceEE
Q psy6572 594 RRSCNNSQPELLFPATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGL----QEPRG--IALNPAYGYMY 667 (1416)
Q Consensus 594 ~r~~l~s~~~~l~~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l----~~P~g--IavDp~~g~LY 667 (1416)
..+++.+. +++..+..|....+.+.+...|++....+++.++.+....+.+.....+ ..|.. ++++...|++|
T Consensus 163 sVID~~t~-~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~ 241 (386)
T 3sjl_D 163 GVVDLEGK-AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV 241 (386)
T ss_dssp EEEETTTT-EEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred EEEECCCC-cEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEE
Confidence 88877632 3333322222222334455555565556666666654321111111111 23333 35565677776
Q ss_pred EeeCCCCceEEEEecCCCCCEEEeecC--------CC-CCe---eEEeecCCCeEEEecC---------CCCeEEEEeCC
Q psy6572 668 WTDWGQNAHIGKAKMDGSNPKVIISKN--------LS-WPN---ALTISYETNELFWGDA---------HEDYIAVSDLN 726 (1416)
Q Consensus 668 WtD~g~~~~I~ra~mDGs~r~vlv~~~--------l~-~P~---gLaiD~~~~rLYWtD~---------~~~~I~~~~ld 726 (1416)
|...+ .+|+.+++.+...+++-.-. .. .|. .++|+...++||++.. ..+.|..+++.
T Consensus 242 ~vs~~--g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~ 319 (386)
T 3sjl_D 242 WPTYT--GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 319 (386)
T ss_dssp EEBTT--SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEeCC--CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence 65543 47999999887665542211 11 133 4889999999999853 12578888875
Q ss_pred CCce-EEEEeccCCCCcccccceeEEEe-cC--cEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 727 GENI-KIIVSRRMDPTINLHHVFALAVF-ED--HLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 727 G~~r-~~v~~~~~~p~~~l~~P~~lav~-~d--~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
...+ +.|..+ ..|.+|++. .+ +||.+++..+.|..++..+++....+ ....+|..|.+-
T Consensus 320 t~kv~~~i~vg--------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i--~~~~~p~~l~~s 382 (386)
T 3sjl_D 320 TGERLAKFEMG--------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV--NQLGHGPQVITT 382 (386)
T ss_dssp TCCEEEEEEEE--------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE--CCCCSSCCEEEE
T ss_pred CCeEEEEEECC--------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe--cCCCCCceeEEC
Confidence 4333 333322 357789984 32 58999999999999998888866665 455666666554
No 142
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.55 E-value=7.1e-08 Score=98.81 Aligned_cols=78 Identities=29% Similarity=0.743 Sum_probs=65.3
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCcccc-CCcC---C--CCCccceeeecCC-eeeecCCC
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVD-TNEC---L--DRPCSHYCRNTLG-SYSCSCAP 521 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d-idEC---~--~~~Csq~C~nt~g-sy~C~C~~ 521 (1416)
++++|...+ |.+ .|++++++|+|.|++||. ++.|.+ +++| . ++.|+|.|+++.| +|+|.|++
T Consensus 46 did~C~~~p----C~n~g~C~~~~g~y~C~C~~G~~-----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~ 116 (142)
T 2c4f_L 46 DGDQCASSP----CQNGGSCKDQLQSYICFCLPAFE-----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE 116 (142)
T ss_dssp TCCGGGGCC----CCTTCEEEEETTEEEEECCTTEE-----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCT
T ss_pred ccCcCcCCC----cCCCCEEeCCCCCEEeeCCCCcc-----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCC
Confidence 466776433 776 799999999999999995 567986 6764 3 5789999999999 99999999
Q ss_pred CcEEecCCCceEecCC
Q psy6572 522 GYALLSDKHGCKATSD 537 (1416)
Q Consensus 522 Gy~L~~dg~sC~a~~~ 537 (1416)
||.|..+|++|..++.
T Consensus 117 Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 117 GYSLLADGVSCTPTVE 132 (142)
T ss_dssp TEEECTTSSCEEESSS
T ss_pred CceECCCCCCCCCCCc
Confidence 9999999999988754
No 143
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.51 E-value=1.1e-05 Score=95.24 Aligned_cols=226 Identities=15% Similarity=0.092 Sum_probs=134.1
Q ss_pred CCeEEEEecEEEEEEecC--CcceEEe--cccccceeeeeecCCCeEE--Eee------ccC----CCccEEEEecC--C
Q psy6572 539 PPNLLFTNKYYIREVTQA--GVMTIRI--HNQTNAVGLDFDWVDNCLY--WSD------VTM----HGSSIRRSCNN--S 600 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~--g~~~~~~--~~l~~~~~l~~D~~~~~LY--wtD------~~~----~~~~I~r~~l~--s 600 (1416)
..+|++++...|..++++ |....+. .....+..+++++.++.|| .++ ..+ ..+.|..+.++ +
T Consensus 51 g~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g 130 (365)
T 1jof_A 51 RKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG 130 (365)
T ss_dssp SSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC
T ss_pred CCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC
Confidence 345666554456655553 4322111 1113467789988877543 443 110 12356666665 2
Q ss_pred CCe-EEe-----ecCCCceEEEEccCCcEEEeeCCCCeEEEeecC--CCceEE-EEc-C-CCCCcceeeecCCcceEEEe
Q psy6572 601 QPE-LLF-----PATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD--GRFRKV-LIN-K-GLQEPRGIALNPAYGYMYWT 669 (1416)
Q Consensus 601 ~~~-~l~-----~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld--G~~~~v-Li~-~-~l~~P~gIavDp~~g~LYWt 669 (1416)
... .+. ....|.++++++.++.||.++.+.++|.+.+++ |+...+ .+. . ....|++|+++|..++||++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 131 KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEE
Confidence 221 222 135789999999999999999888999999986 443222 111 1 24679999999998899999
Q ss_pred eCCCCceEEEEecCC-CCCE-----EEee--cCC---C-------CCeeEE-eecCCCeEEEecCCCC-----eEEEEeC
Q psy6572 670 DWGQNAHIGKAKMDG-SNPK-----VIIS--KNL---S-------WPNALT-ISYETNELFWGDAHED-----YIAVSDL 725 (1416)
Q Consensus 670 D~g~~~~I~ra~mDG-s~r~-----vlv~--~~l---~-------~P~gLa-iD~~~~rLYWtD~~~~-----~I~~~~l 725 (1416)
..... .|....++. +.+. .+.. ..+ . +|.+|+ +++..++||.++...+ .|...++
T Consensus 211 ~~~~~-~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 211 MEAGN-RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp ETTTT-EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred ECCCC-eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 86433 666666653 2221 1111 111 1 588999 9988888999886554 7777776
Q ss_pred C--CCceEEE--EeccCCCCcccccceeEEE-----ecCcEEEeecCCCeeEEec
Q psy6572 726 N--GENIKII--VSRRMDPTINLHHVFALAV-----FEDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 726 d--G~~r~~v--~~~~~~p~~~l~~P~~lav-----~~d~LYwtD~~~~~I~~~n 771 (1416)
+ |.-.++. +... ...|.+|++ .+.+||++....+.|...+
T Consensus 290 ~~~g~~~~~~~~~~~~------~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 290 RDCGSIEKQLFLSPTP------TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp CTTSCEEEEEEEEECS------SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred CCCCCEEEeeeeeecC------CCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 3 4433221 2111 223555555 3678999887777665443
No 144
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.46 E-value=8.5e-08 Score=94.97 Aligned_cols=78 Identities=28% Similarity=0.663 Sum_probs=62.3
Q ss_pred ccccccCCCCCCcccccceec-CCceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeecCCCCcEEecCC
Q psy6572 451 FVNECNVSHGGQLCAHECIDL-KIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSCAPGYALLSDK 529 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~~C~nt-~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg 529 (1416)
+|+||... + |.+.|+++ +++|+|.|++||.+...+...|++ +|..++|.+.|++ .++|+|.|++||+|.. +
T Consensus 3 dideC~~~--p--C~~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~--~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g 74 (118)
T 1dx5_I 3 PVDPCFRA--N--CEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQM--FCNQTACPADCDP-NTQASCECPEGYILDD-G 74 (118)
T ss_dssp CCCGGGGC--C--CSSEEEECSSSCEEEECCTTEEEETTEEEEEEE--CCCSSEEECEECT-TSTTCEECCTTEEEET-T
T ss_pred ccccCCCC--C--CCCCCCCCCCCCEEeECCCCccccCCCCCcccc--ccCCCCCCCcccC-CCCeEeECCCCccCCC-C
Confidence 46788543 3 99999999 999999999999987333344554 4667889899998 5899999999999887 7
Q ss_pred CceEecC
Q psy6572 530 HGCKATS 536 (1416)
Q Consensus 530 ~sC~a~~ 536 (1416)
+.|+.++
T Consensus 75 ~~C~did 81 (118)
T 1dx5_I 75 FICTDID 81 (118)
T ss_dssp TEEEECC
T ss_pred Ccccccc
Confidence 8887654
No 145
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.46 E-value=2.3e-05 Score=87.76 Aligned_cols=191 Identities=16% Similarity=0.080 Sum_probs=125.0
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCCC--ceEEEEccCCcEEEeeCCCCeEEEeecCCCc-e
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATSP--DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-R 643 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~p--~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~ 643 (1416)
..||.|+ ++.||.+......+.|+++++.+ +...-+. ...+ +||+++ ++.||.+.+..++|.+.++.... .
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 4789997 57999987664345788888873 3222222 2344 456664 88999999999999999986543 4
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC--EEEeec---CCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP--KVIISK---NLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r--~vlv~~---~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
..+-.. ..+.||+ +..++||.+| + ..+|...+...... ++.+.. .+..+|.|.. .+++||...+..+
T Consensus 121 ~ti~~~--~eG~glt--~dg~~L~~Sd-G-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~--~~G~lyan~w~~~ 192 (262)
T 3nol_A 121 RSFNYD--GEGWGLT--HNDQYLIMSD-G-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW--VDGEIFANVWQTN 192 (262)
T ss_dssp EEEECS--SCCCCEE--ECSSCEEECC-S-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE--ETTEEEEEETTSS
T ss_pred EEEECC--CCceEEe--cCCCEEEEEC-C-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE--ECCEEEEEEccCC
Confidence 444322 1344555 5578999999 4 35788877654322 222221 2456666666 4899999999999
Q ss_pred eEEEEeC-CCCceEEEEeccCCCC-----cccccceeEEEe--cCcEEEeecCCCeeEEec
Q psy6572 719 YIAVSDL-NGENIKIIVSRRMDPT-----INLHHVFALAVF--EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 719 ~I~~~~l-dG~~r~~v~~~~~~p~-----~~l~~P~~lav~--~d~LYwtD~~~~~I~~~n 771 (1416)
.|.+++. +|.-..+|-.....+. ....-|.|||+. +++||+|-..-.+++.+.
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~ 253 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEIT 253 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEE
Confidence 9999997 4555555543321111 112357899996 578999987777777663
No 146
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.46 E-value=6.8e-08 Score=102.41 Aligned_cols=59 Identities=31% Similarity=0.616 Sum_probs=48.2
Q ss_pred CCCCCCccccC--CCeeecCCCCCCCCCCCCCCCcccccccCCC-ccCCcc--cccCCCeeccc
Q psy6572 1169 TKCKPNMFTCA--NHQCISLNWRCDGEPDCSDNSDEIESICAGL-ACEPNR--FKCKNNKCIHR 1227 (1416)
Q Consensus 1169 ~~C~~~~f~C~--~~~Ci~~~~~CDg~~DC~dgsDE~~~~C~~~-~C~~~~--f~C~~~~Ci~~ 1227 (1416)
..|.+.+|+|. +|.||+..|+|||.+||+|||||.+.+|... +|.+.+ ++|.++.|+.+
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~~d~C~kr 114 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWHGCLAR 114 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEEECSSCCC
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEecCChhhcC
Confidence 35778999995 6899999999999999999999987789877 887755 46776666533
No 147
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=1.7e-05 Score=94.11 Aligned_cols=236 Identities=8% Similarity=-0.051 Sum_probs=144.8
Q ss_pred CeEEEEecE------EEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeecc-------CCCccEEEEecCCCC--
Q psy6572 540 PNLLFTNKY------YIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVT-------MHGSSIRRSCNNSQP-- 602 (1416)
Q Consensus 540 ~~li~s~~~------~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~-------~~~~~I~r~~l~s~~-- 602 (1416)
..+|+++.. .|..|+++... ..+..+ ..| +|+|.+..++||+++.. .....|..+++.+..
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 456666532 67777776655 222222 346 89999999999999842 112368888777322
Q ss_pred eEEe-e-------cCCCceEEEEccCCcEEEeeCC-CCeEEE--eecCCCceEEEE------------------------
Q psy6572 603 ELLF-P-------ATSPDGLTVDWVGRNLYWCDKG-LDTIEV--AKLDGRFRKVLI------------------------ 647 (1416)
Q Consensus 603 ~~l~-~-------l~~p~gLAvD~~~~~LYwtD~~-~~~I~v--~~ldG~~~~vLi------------------------ 647 (1416)
..|. . ...|.+|+|++-++.||+++.. .+.|.+ +++.. .+.|-
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 1221 1 2479999999999999999876 566777 55432 11110
Q ss_pred ---c-CC------------------CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC---------CC
Q psy6572 648 ---N-KG------------------LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN---------LS 696 (1416)
Q Consensus 648 ---~-~~------------------l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~---------l~ 696 (1416)
. .. ...|. + .+..+.+||+.. ..|..+++.+...+++..-. ..
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~---~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~ 261 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA---SSILQGDIPAAGATMKAAIDGNESGRKADNF 261 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS---SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC---CEEEEEECCCCcceEEEEEEecccccccccc
Confidence 0 00 01122 2 334456677664 36777777665444433211 12
Q ss_pred CCee---EEeecCCCeEEEecC---C-----CCeEEEEeCCCCc-eEEEEeccCCCCcccccceeEEEe--cCcEEEeec
Q psy6572 697 WPNA---LTISYETNELFWGDA---H-----EDYIAVSDLNGEN-IKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDW 762 (1416)
Q Consensus 697 ~P~g---LaiD~~~~rLYWtD~---~-----~~~I~~~~ldG~~-r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~ 762 (1416)
.|.| +++++..++||++.. + .+.+..+++.... .+.|.. -..|.+|++. +.+||++.+
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--------g~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--------GHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--------EEEECEEEECCSSSCEEEEEE
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--------CCCcceEEECCCCCEEEEEcc
Confidence 3566 889998999999864 2 2345577764332 222221 1268999985 346999998
Q ss_pred -CCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 763 -EMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 763 -~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
..+.|..++..+++....+ .....|.+|.+.
T Consensus 334 ~~~~~VsVID~~t~kvv~~I--~vg~~P~~i~~~ 365 (368)
T 1mda_H 334 AGTEVLDIYDAASDQDQSSV--ELDKGPESLSVQ 365 (368)
T ss_dssp TTTTEEEEEESSSCEEEEEC--CCCSCCCEEECC
T ss_pred CCCCeEEEEECCCCcEEEEE--ECCCCCCEEEee
Confidence 7999999998887766555 345677777653
No 148
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.45 E-value=3.3e-05 Score=91.32 Aligned_cols=243 Identities=9% Similarity=-0.020 Sum_probs=145.0
Q ss_pred CCCeEEEEe-----------cEEEEEEecCCcc---eEEec-----ccccceeeeeecCCCeEEEeeccCCCccEEEEec
Q psy6572 538 VPPNLLFTN-----------KYYIREVTQAGVM---TIRIH-----NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCN 598 (1416)
Q Consensus 538 ~~~~li~s~-----------~~~I~~i~l~g~~---~~~~~-----~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l 598 (1416)
...+||+++ ...|..+++.... ++.+. ....|.+|++++.+++||.+.... ...|..+.+
T Consensus 60 dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~-~~~v~v~d~ 138 (361)
T 2oiz_A 60 DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP-ATSIGIVDV 138 (361)
T ss_dssp TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS-SEEEEEEET
T ss_pred CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC-CCeEEEEEC
Confidence 345677765 2357777765433 23222 124688999999999999998652 137888877
Q ss_pred CCCCeEEee---cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC--CceEEEE----cCCCCCcceeeecCCcceEEEe
Q psy6572 599 NSQPELLFP---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG--RFRKVLI----NKGLQEPRGIALNPAYGYMYWT 669 (1416)
Q Consensus 599 ~s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG--~~~~vLi----~~~l~~P~gIavDp~~g~LYWt 669 (1416)
.+. +++.. +....++++.+..+..|++-...+++..+.++. +...++. ...-..|..++..+....+||.
T Consensus 139 ~~~-~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 217 (361)
T 2oiz_A 139 AKG-DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFV 217 (361)
T ss_dssp TTT-EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEE
T ss_pred CCC-cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEE
Confidence 733 33332 223334556666666777766666666666543 2221111 1122345555555555566666
Q ss_pred eCCCCceEEEEecCCCCCEEEeec--------CCC-CCee---EEeecCCCeEEEecC----------CCCeEEEEeCCC
Q psy6572 670 DWGQNAHIGKAKMDGSNPKVIISK--------NLS-WPNA---LTISYETNELFWGDA----------HEDYIAVSDLNG 727 (1416)
Q Consensus 670 D~g~~~~I~ra~mDGs~r~vlv~~--------~l~-~P~g---LaiD~~~~rLYWtD~----------~~~~I~~~~ldG 727 (1416)
... ..|..+++.+....++... .+. .|.| +++++..++||++.. ..+.|..+++..
T Consensus 218 ~~~--~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t 295 (361)
T 2oiz_A 218 SYY--GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT 295 (361)
T ss_dssp BTT--SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred eCC--CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence 532 3688888876554443221 111 2444 999988899999853 134788888754
Q ss_pred CceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCC--CceEEEEeCCCCCCeeeeee
Q psy6572 728 ENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTG--KNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 728 ~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG--~~~~~l~~~~~~~p~~I~v~ 795 (1416)
..+..-+... . |.+|++. +.+||.+.+ +.|..++..++ +....+. ..-..|.+|++.
T Consensus 296 ~~~v~~i~~~-------~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~ 356 (361)
T 2oiz_A 296 KQRVARIPGR-------D-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFH 356 (361)
T ss_dssp TEEEEEEECT-------T-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEET-TSCSSEEEEEEC
T ss_pred CcEEEEEecC-------C-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEec-cCCCCcEEEEec
Confidence 4332222221 2 9999985 568888886 88888888777 5544443 344567777653
No 149
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.44 E-value=1.6e-07 Score=100.71 Aligned_cols=80 Identities=30% Similarity=0.810 Sum_probs=62.9
Q ss_pred CcccccccCCCCCCccc--ccce----ecCCceEEeeCCCceecCCCCCccccC--CcCCCCCc---cceeeecCCeeee
Q psy6572 449 SCFVNECNVSHGGQLCA--HECI----DLKIGYKCACRKGYQVHPEDKHLCVDT--NECLDRPC---SHYCRNTLGSYSC 517 (1416)
Q Consensus 449 ~C~i~eC~~~~~~~~Cs--~~C~----nt~~gy~C~C~~Gy~L~p~d~~tC~di--dEC~~~~C---sq~C~nt~gsy~C 517 (1416)
.|.+++|...+ |. ..|+ +++++|+|.|++||.+.+.+++.|+++ +||. .+| ..+|+|+.|+|+|
T Consensus 88 ~C~~d~C~~~~----C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C 162 (186)
T 1z1y_A 88 TCVLDVCQYXN----CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXC 162 (186)
T ss_dssp EEEEGGGTTCC----CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEE
T ss_pred CCCCCcCcCCC----CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeee
Confidence 45567775432 43 2455 899999999999999875578899986 8897 488 4599999999999
Q ss_pred cCCCCcEEecCCCceE
Q psy6572 518 SCAPGYALLSDKHGCK 533 (1416)
Q Consensus 518 ~C~~Gy~L~~dg~sC~ 533 (1416)
.|++||++....+...
T Consensus 163 ~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 163 QCMEGFTFDXEXNVCL 178 (186)
T ss_dssp EECTTCEEETTTTEEE
T ss_pred ECCCCCccCcccccCC
Confidence 9999999887765444
No 150
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.44 E-value=9.9e-08 Score=82.00 Aligned_cols=53 Identities=25% Similarity=0.661 Sum_probs=45.7
Q ss_pred ccCCCCCCcccccceecC-CceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCC
Q psy6572 455 CNVSHGGQLCAHECIDLK-IGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLG 513 (1416)
Q Consensus 455 C~~~~~~~~Cs~~C~nt~-~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~g 513 (1416)
|...+++ |+|.|++++ ++|+|+|++||+|. .|+++|+++++ .+|+|+|+|...
T Consensus 2 C~~~ngg--C~~~C~n~~~gs~~C~C~~Gy~L~-~D~~tC~d~~~---~pC~~~c~n~~~ 55 (59)
T 2wph_E 2 CNIKNGR--CEQFCKNSADNKVVCSCTEGYRLA-ENQKSCEPAVP---FPCGRVSVSQTS 55 (59)
T ss_dssp TTTGGGG--CSSEEEECSTTCEEEECCTTEEEC-TTSSCEEESSS---SCTTCCCSCCCS
T ss_pred CcCCCCC--cCCEeEeCCCCCEEeeCCCCcEEC-CCCCcccCCCC---CCCCCccccccc
Confidence 4445566 999999999 69999999999998 89999999887 799999998653
No 151
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.43 E-value=1.1e-05 Score=90.37 Aligned_cols=177 Identities=11% Similarity=0.024 Sum_probs=114.8
Q ss_pred CeEEEEecE----EEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCC
Q psy6572 540 PNLLFTNKY----YIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSP 611 (1416)
Q Consensus 540 ~~li~s~~~----~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p 611 (1416)
..||++.+. .|+++++.... ++.+.......||+++ +++||.+....+ .++++++.+. +++.. -..+
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~--~v~v~D~~t~-~~~~ti~~~~ 127 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG--LGFVWNIRNL-RQVRSFNYDG 127 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS--EEEEEETTTC-CEEEEEECSS
T ss_pred CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC--EEEEEECccC-cEEEEEECCC
Confidence 467887754 79999987655 3333322233566664 789999988754 8888887732 22222 1123
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecCCC-ceEEEEcC----CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLDGR-FRKVLINK----GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~-~~~vLi~~----~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
+|.++.+.++.||.+|. .++|.+.+.... ....+... .+..++.|.. ..|+||...|..+ .|.+++..-..
T Consensus 128 eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~--~~G~lyan~w~~~-~I~vIDp~tG~ 203 (262)
T 3nol_A 128 EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW--VDGEIFANVWQTN-KIVRIDPETGK 203 (262)
T ss_dssp CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE--ETTEEEEEETTSS-EEEEECTTTCB
T ss_pred CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE--ECCEEEEEEccCC-eEEEEECCCCc
Confidence 55555556899999995 789999987743 33333221 2233444544 4799999998765 88888875333
Q ss_pred C-EEEeecC-----------CCCCeeEEeecCCCeEEEecCCCCeEEEEeC
Q psy6572 687 P-KVIISKN-----------LSWPNALTISYETNELFWGDAHEDYIAVSDL 725 (1416)
Q Consensus 687 r-~vlv~~~-----------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l 725 (1416)
. .+|-... ..-|||||+|+.+++||++--.-.+++.+.+
T Consensus 204 V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 204 VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 3 3332222 2468999999999999999877677777765
No 152
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.43 E-value=1.1e-07 Score=100.94 Aligned_cols=58 Identities=34% Similarity=0.707 Sum_probs=45.1
Q ss_pred CccCCCCCceecC-CCCceecCcccccCCCCCCCCCCCCCCcccCC-CCCCCcee--eCCCCCeE
Q psy6572 203 STCKANNNVFQCD-NNKTCISKSWVCDGTYDCTDRSDENSTYCAHS-ECNLFEFR--CNSTGQCI 263 (1416)
Q Consensus 203 ~~C~~~~~~F~C~-~~~~CI~~~w~CDg~~DC~D~sDE~~~~c~~~-~C~~~~F~--C~~~~~CI 263 (1416)
.+|.+ ++|+|. ++++|||..|+|||++||.|||||....|... +|.+.+|+ | .++.|+
T Consensus 51 ~~C~~--~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~-~~d~C~ 112 (220)
T 2gtl_N 51 THCEK--RTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTS-TWHGCL 112 (220)
T ss_dssp CSSCT--TEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEE-EECSSC
T ss_pred CCCCC--CccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEe-cCChhh
Confidence 46777 899994 36899999999999999999999974458776 88776654 5 344444
No 153
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.42 E-value=1.9e-05 Score=93.30 Aligned_cols=194 Identities=13% Similarity=0.093 Sum_probs=133.1
Q ss_pred ccccceeeeeecCCCeEEEeeccCC-------------CccEEEEecCCC-CeEEee----------cCCCceEEEEcc-
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMH-------------GSSIRRSCNNSQ-PELLFP----------ATSPDGLTVDWV- 619 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~-------------~~~I~r~~l~s~-~~~l~~----------l~~p~gLAvD~~- 619 (1416)
++..+.++.+|. .++|+++|.+.- ..+|..++|.+. .+++.. ......|+||..
T Consensus 85 ~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 355677777775 677888876521 235677777743 122222 123467999932
Q ss_pred ------CCcEEEeeCCCCeEEEeecC-CCceEEEEcC------------C-----CCCcceeeecCC----cceEEEeeC
Q psy6572 620 ------GRNLYWCDKGLDTIEVAKLD-GRFRKVLINK------------G-----LQEPRGIALNPA----YGYMYWTDW 671 (1416)
Q Consensus 620 ------~~~LYwtD~~~~~I~v~~ld-G~~~~vLi~~------------~-----l~~P~gIavDp~----~g~LYWtD~ 671 (1416)
.+.+|+||.+...|.|.++. |+.++++... + .....||||.|. .++|||.-.
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 57899999999999999986 5566666310 0 124578999998 789999986
Q ss_pred CCCceEEEEe---cC-C---CCCEEEeecC-CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC-----CceEEEEeccC
Q psy6572 672 GQNAHIGKAK---MD-G---SNPKVIISKN-LSWPNALTISYETNELFWGDAHEDYIAVSDLNG-----ENIKIIVSRRM 738 (1416)
Q Consensus 672 g~~~~I~ra~---mD-G---s~r~vlv~~~-l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG-----~~r~~v~~~~~ 738 (1416)
... +++++. |. . ...+.+.... .....++++|..++.||+++...+.|...+.++ .+..+|+...
T Consensus 244 ss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~- 321 (381)
T 3q6k_A 244 SAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS- 321 (381)
T ss_dssp SCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-
T ss_pred CCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-
Confidence 543 677765 22 2 2223333332 234457889877999999999999999999887 4667777653
Q ss_pred CCCcccccceeEEE-ecCcEEEeecCCC
Q psy6572 739 DPTINLHHVFALAV-FEDHLFWTDWEMK 765 (1416)
Q Consensus 739 ~p~~~l~~P~~lav-~~d~LYwtD~~~~ 765 (1416)
.+..|.+|++ .+++||++..+..
T Consensus 322 ----~l~~pd~~~i~~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 322 ----RFVFGTDISVDSKGGLWFMSNGFP 345 (381)
T ss_dssp ----TCCSEEEEEECTTSCEEEEECSCC
T ss_pred ----CccccCeEEECCCCeEEEEECcch
Confidence 4899999999 4789999876543
No 154
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.42 E-value=5.3e-05 Score=90.47 Aligned_cols=231 Identities=13% Similarity=0.059 Sum_probs=151.5
Q ss_pred CCeEEEEec--EEEEEEecCCcceEE-e------cccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEEee
Q psy6572 539 PPNLLFTNK--YYIREVTQAGVMTIR-I------HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELLFP 607 (1416)
Q Consensus 539 ~~~li~s~~--~~I~~i~l~g~~~~~-~------~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l~~ 607 (1416)
...++++.. ..|+.+++.....+. . .....+.++++.+ .+.+|++.... +.|+.+.+.+ .. ..+..
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d--~~v~~~d~~~~~~~~~~~~ 209 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQA--NAVHVFDLKTLAYKATVDL 209 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGG--TEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCC--CEEEEEECCCceEEEEEcC
Confidence 345555442 347777766443111 1 1122456778844 56778777664 3788888873 22 22222
Q ss_pred -cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCC------CceEEEE
Q psy6572 608 -ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ------NAHIGKA 680 (1416)
Q Consensus 608 -l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~------~~~I~ra 680 (1416)
...|.+|++++.++.||++....+.|.+.++........+ .....|.+++++|...+||.+.++. ...|...
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~ 288 (433)
T 3bws_A 210 TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT-DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY 288 (433)
T ss_dssp SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC-CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe-cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence 5678899999999999999988899999998654333333 2344599999999988999887532 3478888
Q ss_pred ecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEE
Q psy6572 681 KMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLF 758 (1416)
Q Consensus 681 ~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LY 758 (1416)
++.......++. ....|.++++++..++||++....+.|...++++......+.. ...|.+|++. +.+||
T Consensus 289 d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 289 SMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-------FDKPNTIALSPDGKYLY 360 (433)
T ss_dssp ETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-------SSSEEEEEECTTSSEEE
T ss_pred ECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-------CCCCCeEEEcCCCCEEE
Confidence 876543332221 1236889999987778999988889999999875544433332 3457788885 34688
Q ss_pred EeecCC--------------CeeEEecccCCCceEEE
Q psy6572 759 WTDWEM--------------KSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 759 wtD~~~--------------~~I~~~nk~tG~~~~~l 781 (1416)
.+.... +.|+..+..+++....+
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 877654 36777776666544443
No 155
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.42 E-value=1.1e-07 Score=102.00 Aligned_cols=68 Identities=28% Similarity=0.502 Sum_probs=50.3
Q ss_pred CCCCCCCceeeCC-CCCeEcCcccccCCCCCCCCCCCccccCCcccccccCCeeecCCCceeccccccCCCCCCCCCCCc
Q psy6572 246 HSECNLFEFRCNS-TGQCIPITWVCDGVTDCIDKSDEHHSQDCLNVETCMEGYFKCLNGRCLLENYYCDGENDCGDNSDE 324 (1416)
Q Consensus 246 ~~~C~~~~F~C~~-~~~CI~~~w~CDG~~DC~DgsDE~~~~~C~~~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE 324 (1416)
..+|.+.+|+|.+ +|+|||..|+|||++||+|||||.. ..|....++...+|.+. .....|.++++|
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~-~~C~~~~~~~~~~~~g~-----------~~~~~C~~~~pe 118 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDP-ETCSLNITHVGSSYTGL-----------ATWTSCEDLNPD 118 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSH-HHHCCGGGCTTCEEEEE-----------EEESSSCSCCSE
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCcccc-CcCCCCcccCCcccccc-----------cCcccCCCCCCC
Confidence 4579999999963 6999999999999999999999942 25754324445566542 222378888888
Q ss_pred c
Q psy6572 325 P 325 (1416)
Q Consensus 325 ~ 325 (1416)
.
T Consensus 119 ~ 119 (217)
T 2gtl_M 119 H 119 (217)
T ss_dssp E
T ss_pred e
Confidence 6
No 156
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.41 E-value=4.8e-08 Score=102.38 Aligned_cols=60 Identities=33% Similarity=0.709 Sum_probs=48.7
Q ss_pred CceEEeeCC--CceecCCCCCccccCCcCC--CCCccc-eeeecCCeeeecCCCCcEEecCCCceE
Q psy6572 473 IGYKCACRK--GYQVHPEDKHLCVDTNECL--DRPCSH-YCRNTLGSYSCSCAPGYALLSDKHGCK 533 (1416)
Q Consensus 473 ~gy~C~C~~--Gy~L~p~d~~tC~didEC~--~~~Csq-~C~nt~gsy~C~C~~Gy~L~~dg~sC~ 533 (1416)
++|+|.|++ ||.+. .+++.|++||||+ +++|.+ +|+|+.|+|+|.|++||++..++++|+
T Consensus 98 ~~y~C~C~~g~G~~~~-~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 98 SEYKILCPGGEGFRPN-PITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp HHHHHHCTTCTTEEEC-TTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CCceeECCCCCCcccC-CCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 445555655 66665 4566899999998 467985 999999999999999999999999884
No 157
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.39 E-value=3.9e-05 Score=85.90 Aligned_cols=188 Identities=16% Similarity=0.080 Sum_probs=124.2
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-CeEEeecCCC--ceEEEEccCCcEEEeeCCCCeEEEeecCCCc-e
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-PELLFPATSP--DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-R 643 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~~~l~~l~~p--~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~ 643 (1416)
..||.|+ +++||.+..... .|+++++. .+ ...++. ..+ +||++ .+++||.+.+..++|.+.++.... .
T Consensus 57 tqGL~~~--~~~Ly~stG~~g--~v~~iD~~Tgkv~~~~l~-~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQG--TLRQLSLESAQPVWMERL-GNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTT--EEEECCSSCSSCSEEEEC-TTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEE--CCEEEEEcCCCC--EEEEEECCCCcEEeEECC-CCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEE
Confidence 4688887 589999988753 68888887 22 223321 233 55666 478999999999999999987543 3
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE--EEeec---CCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK--VIISK---NLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~--vlv~~---~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
..+-. . +.|.+|.+..++||.+| + ..+|...+....... +.+.. .+..++.|.. .+++||...+..+
T Consensus 130 ~ti~~-~---~eGwGLt~Dg~~L~vSd-G-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~--~dG~lyanvw~s~ 201 (268)
T 3nok_A 130 RTTRY-S---GEGWGLCYWNGKLVRSD-G-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC--ANGVIYANIWHSS 201 (268)
T ss_dssp EEEEC-S---SCCCCEEEETTEEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE--ETTEEEEEETTCS
T ss_pred EEEeC-C---CceeEEecCCCEEEEEC-C-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE--eCCEEEEEECCCC
Confidence 34432 1 34444445578999999 5 458888776543322 22222 2456677665 4889999999999
Q ss_pred eEEEEeC-CCCceEEEEeccCCC------CcccccceeEEEe--cCcEEEeecCCCeeEEec
Q psy6572 719 YIAVSDL-NGENIKIIVSRRMDP------TINLHHVFALAVF--EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 719 ~I~~~~l-dG~~r~~v~~~~~~p------~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~n 771 (1416)
.|.+++. +|.-..+|-.....+ .....-|.|||+. +++||+|-..-.+++.+.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 9999997 555555554331100 0012367899996 678999987777777763
No 158
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=2.9e-05 Score=86.09 Aligned_cols=178 Identities=13% Similarity=-0.002 Sum_probs=115.9
Q ss_pred CeEEEEecE----EEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCC
Q psy6572 540 PNLLFTNKY----YIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSP 611 (1416)
Q Consensus 540 ~~li~s~~~----~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p 611 (1416)
..||++++. .|+++++.... ++.+.......||+++ +++||.+....+ .+++++..+ .+++.. -..+
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~--~v~v~D~~t-l~~~~ti~~~~ 105 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH--EGFVYDLAT-LTPRARFRYPG 105 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS--EEEEEETTT-TEEEEEEECSS
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC--EEEEEECCc-CcEEEEEeCCC
Confidence 467777654 79999987655 2333333334566664 789999988754 888888762 223332 1123
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcC----CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINK----GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~----~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
+|.++.+.++.||.+|. .++|.+.+..... .+.+... .+..++. |.+..|+||...|..+ .|.++++.-..
T Consensus 106 ~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe--Le~~~G~lyanvw~s~-~I~vIDp~tG~ 181 (243)
T 3mbr_X 106 EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE--LEWVNGELLANVWLTS-RIARIDPASGK 181 (243)
T ss_dssp CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEE--EEEETTEEEEEETTTT-EEEEECTTTCB
T ss_pred CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCccccccee--eEEeCCEEEEEECCCC-eEEEEECCCCC
Confidence 55556667899999994 8899999876543 2222211 1222333 3455899999998765 78888875433
Q ss_pred C-EEEeecC------------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 687 P-KVIISKN------------LSWPNALTISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 687 r-~vlv~~~------------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
. ..|-... ..-|||||+|+.+++||++--.=.+++.+.+.
T Consensus 182 V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 182 VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 3 3332221 23679999999999999998777788877654
No 159
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.38 E-value=1.5e-07 Score=79.76 Aligned_cols=45 Identities=22% Similarity=0.688 Sum_probs=40.0
Q ss_pred ccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 453 NECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 453 ~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
+||...+++ |+|.|+|++++|+|.|++||+|. .++++|++++||.
T Consensus 2 dEC~~~~~~--C~~~C~nt~Gsy~C~C~~Gy~L~-~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGD--CDQFCHEEQNSVVCSCARGYTLA-DNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGG--CSSEEEEETTEEEEECCTTEEEC-TTSSCEEESSSSC
T ss_pred ccccCCCCC--cCcEeEcCCCCeEEeCCCCCEEC-CCCCeeccCcccc
Confidence 567655556 99999999999999999999998 7899999999984
No 160
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.38 E-value=3.6e-05 Score=91.94 Aligned_cols=218 Identities=15% Similarity=0.101 Sum_probs=144.3
Q ss_pred eEEEEe--cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cCCCceE
Q psy6572 541 NLLFTN--KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-ATSPDGL 614 (1416)
Q Consensus 541 ~li~s~--~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~~p~gL 614 (1416)
.++++. ...|+.+++.... ..+......+.+++|++.++.||++.... +.|+.+.+.+. ....+. ...|.+|
T Consensus 182 ~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~ 259 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRKTKLEIRKTDKIGLPRGL 259 (433)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEECCCCSEEEEE
T ss_pred EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECCCCcEEEEecCCCCceEE
Confidence 344443 3467777776544 22333455688999999999999988654 37888887732 222222 4568899
Q ss_pred EEEccCCcEEEeeC-------CCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC
Q psy6572 615 TVDWVGRNLYWCDK-------GLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP 687 (1416)
Q Consensus 615 AvD~~~~~LYwtD~-------~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r 687 (1416)
++++.++.||.+.. ..+.|.+.++.......++. ....|++++++|...+||++.... ..|...+++....
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~-~~v~v~d~~~~~~ 337 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCC-SKIEVYDLKEKKV 337 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTT-TEEEEEETTTTEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCC-CEEEEEECCCCcE
Confidence 99998889998875 34588899987544333321 123789999999988999997544 4788888875433
Q ss_pred EEEeecCCCCCeeEEeecCCCeEEEecCCC--------------CeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe
Q psy6572 688 KVIISKNLSWPNALTISYETNELFWGDAHE--------------DYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF 753 (1416)
Q Consensus 688 ~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~--------------~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~ 753 (1416)
...+. ....|.+|++.+...+||.+.... +.|...++........+.. ...|.+|++.
T Consensus 338 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s 409 (433)
T 3bws_A 338 QKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-------GNQPTGLDVS 409 (433)
T ss_dssp EEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-------SSSEEEEEEC
T ss_pred EEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-------CCCCceEEEc
Confidence 33332 456789999998777899987654 3888888755444333332 2457788874
Q ss_pred --cCcEEEeecCCCeeEEe
Q psy6572 754 --EDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 754 --~d~LYwtD~~~~~I~~~ 770 (1416)
+.+||.+....+.|...
T Consensus 410 ~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 410 PDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp TTSCEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEECCCCeEEEE
Confidence 44677776655655443
No 161
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.37 E-value=1.7e-07 Score=83.10 Aligned_cols=47 Identities=30% Similarity=0.535 Sum_probs=42.8
Q ss_pred ccccccCCCCCCcccccceecCC-ceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 451 FVNECNVSHGGQLCAHECIDLKI-GYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~~C~nt~~-gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
+++||...+++ |+|.|+++++ +|+|+|++||+|. .|+++|.+++||.
T Consensus 4 d~~eC~~~ngg--C~h~C~n~~g~s~~C~C~~Gy~L~-~D~~tC~d~dec~ 51 (69)
T 1kli_L 4 DQLICVNENGG--CEQYCSDHTGTKRSCRCHEGYSLL-ADGVSCTPTVEYP 51 (69)
T ss_dssp CCCCTTSGGGG--CSSEEEEETTTEEEEECCTTEEEC-TTSSCEEECSSSC
T ss_pred ccccccCCCCC--cCCEeEcCCCCCEEEeCCCCCeEC-CCCCcccCccccc
Confidence 47889877778 9999999999 8999999999998 8999999999985
No 162
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.36 E-value=0.00012 Score=91.37 Aligned_cols=253 Identities=11% Similarity=0.043 Sum_probs=156.4
Q ss_pred CCeEEEEe--cEEEEEEecCCcc---eEEecc----------cccceeeeeecCCCeEEEeeccCCCccEEEEecCC--C
Q psy6572 539 PPNLLFTN--KYYIREVTQAGVM---TIRIHN----------QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS--Q 601 (1416)
Q Consensus 539 ~~~li~s~--~~~I~~i~l~g~~---~~~~~~----------l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s--~ 601 (1416)
..+|++++ ...|..++..... ++...+ ...+.+|.+.+..+.+|++.... +.|..+.+.. .
T Consensus 237 g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~--g~i~vvd~~~~~~ 314 (543)
T 1nir_A 237 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET--GKVLLVNYKDIDN 314 (543)
T ss_dssp TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT--TEEEEEECTTSSS
T ss_pred CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC--CeEEEEEecCCCc
Confidence 45666665 3456666654433 121111 12467888888888888887664 4888888762 2
Q ss_pred Ce--EEeecCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCc-ceeee-cCCcceEEEeeCCCCce
Q psy6572 602 PE--LLFPATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEP-RGIAL-NPAYGYMYWTDWGQNAH 676 (1416)
Q Consensus 602 ~~--~l~~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P-~gIav-Dp~~g~LYWtD~g~~~~ 676 (1416)
.. .+.....|.++++++.++.||.+....++|.+.++.... ..++.......| +++++ +|..|.+|.|.......
T Consensus 315 l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 315 LTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp CEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSE
T ss_pred ceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCce
Confidence 22 221256799999999999999999888999999986543 333332333334 45554 67779998886422347
Q ss_pred EEEEecCCCC-----CEEE--eecCCCCCeeEEeecCCCeEEEecC-C-----CCeEEEEeCC-CCce-EEEEecc--CC
Q psy6572 677 IGKAKMDGSN-----PKVI--ISKNLSWPNALTISYETNELFWGDA-H-----EDYIAVSDLN-GENI-KIIVSRR--MD 739 (1416)
Q Consensus 677 I~ra~mDGs~-----r~vl--v~~~l~~P~gLaiD~~~~rLYWtD~-~-----~~~I~~~~ld-G~~r-~~v~~~~--~~ 739 (1416)
|...+++... .+++ +...-..+..|++.+...+||.... . .+.|..++++ +... ++|..+. +.
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~ 474 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 474 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCC
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhccc
Confidence 8888887521 1222 2223345678999876666665432 1 3489999975 4333 3331100 00
Q ss_pred CCcccccceeEEE--ecCcEEEeecC----CCeeEEecccCCCceEEEEeCCCCCCeeeee
Q psy6572 740 PTINLHHVFALAV--FEDHLFWTDWE----MKSIERCDKYTGKNCTSVVKNLVHKPMDLRV 794 (1416)
Q Consensus 740 p~~~l~~P~~lav--~~d~LYwtD~~----~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v 794 (1416)
+ .....+..+++ .+.+||++.|. .+.|..++..+++...++....+..|.|+.-
T Consensus 475 ~-~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~p~g~~~ 534 (543)
T 1nir_A 475 G-EGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFN 534 (543)
T ss_dssp C-SSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEEEE
T ss_pred C-CCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCccCCCeeee
Confidence 0 01345666777 46789988873 5789999988888777775456777877553
No 163
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.36 E-value=1.5e-05 Score=97.39 Aligned_cols=202 Identities=10% Similarity=0.121 Sum_probs=127.7
Q ss_pred eEEecccccceeeeeecCCC-eEEEeeccCCCccEEEEecCCC--CeEEee-------------cCCCceEEEEcc---C
Q psy6572 560 TIRIHNQTNAVGLDFDWVDN-CLYWSDVTMHGSSIRRSCNNSQ--PELLFP-------------ATSPDGLTVDWV---G 620 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~-~LYwtD~~~~~~~I~r~~l~s~--~~~l~~-------------l~~p~gLAvD~~---~ 620 (1416)
++++.+|.+|.+|+|.+... +||+++.. ++|+++..++. .+.+.. ...+-||||++. +
T Consensus 7 ~~va~gL~~P~~~a~~pdG~~rl~V~er~---G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 7 QEVVSGLRQPVGALHSGDGSQRLFILEKE---GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEESSEEEEECCSSSSCCEEEEETT---TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEeccCCCCceEEEECCCCCeEEEEEeCC---ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 45677899999999998774 79999875 47888765521 122221 134567999984 6
Q ss_pred CcEEEeeCC------------CCeEEEeecCCC--------ceEEEEc----CCCCCcceeeecCCcceEEEee--CCC-
Q psy6572 621 RNLYWCDKG------------LDTIEVAKLDGR--------FRKVLIN----KGLQEPRGIALNPAYGYMYWTD--WGQ- 673 (1416)
Q Consensus 621 ~~LYwtD~~------------~~~I~v~~ldG~--------~~~vLi~----~~l~~P~gIavDp~~g~LYWtD--~g~- 673 (1416)
+.||++-.. ..+|.++.+... ..++|+. ........|+++|. |+||++- .+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIILGDGMIT 162 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEECCTTCC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEeCCCCCC
Confidence 789987542 137888887531 2345443 23445678999995 8999984 221
Q ss_pred -------------CceEEEEecCCCC-------------------CEEEeecCCCCCeeEEeecCCC------eEEEecC
Q psy6572 674 -------------NAHIGKAKMDGSN-------------------PKVIISKNLSWPNALTISYETN------ELFWGDA 715 (1416)
Q Consensus 674 -------------~~~I~ra~mDGs~-------------------r~vlv~~~l~~P~gLaiD~~~~------rLYWtD~ 715 (1416)
..+|.|++.||+. +..|...++..|.||++|+.++ +||.+|.
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 2589999999951 3457778999999999998754 6777885
Q ss_pred C-C----CeEEEEeCCCCceEEEEeccCCCCccc-----ccceeEEEecC--------cEEEeecCCCeeEEecc
Q psy6572 716 H-E----DYIAVSDLNGENIKIIVSRRMDPTINL-----HHVFALAVFED--------HLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 716 ~-~----~~I~~~~ldG~~r~~v~~~~~~p~~~l-----~~P~~lav~~d--------~LYwtD~~~~~I~~~nk 772 (1416)
. . ..|..+. .|.+.- ..+|...+ ..|.+|+++.+ .+|++++. ++|.++..
T Consensus 243 ~G~~~~~~ei~~i~-~G~~yG-----~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~ 310 (463)
T 2wg3_C 243 NGKNRSSARILQII-KGKDYE-----SEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQ 310 (463)
T ss_dssp ------CEEEEEEC-----CC-----SCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC
T ss_pred CCCCCCCCeEeeec-cCCCCC-----CCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEe
Confidence 2 1 2333331 122110 00121112 35788888754 37888886 66777743
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.34 E-value=4.3e-05 Score=90.01 Aligned_cols=164 Identities=19% Similarity=0.165 Sum_probs=114.5
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-CeEEee------cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-PELLFP------ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~~~l~~------l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
....+.+++|++.++.||.++...+ .|+.+.++ +. .+.+.. ...|++|++++.++.||++....++|.+.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTAN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCC--EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 3457889999999999999987643 78888776 33 222221 34689999999999999999888888888
Q ss_pred ecC---CCceE---EEEc--CCC---C-------Ccceee-ecCCcceEEEeeCCCCc----eEEEEecC--CCCCEE--
Q psy6572 637 KLD---GRFRK---VLIN--KGL---Q-------EPRGIA-LNPAYGYMYWTDWGQNA----HIGKAKMD--GSNPKV-- 689 (1416)
Q Consensus 637 ~ld---G~~~~---vLi~--~~l---~-------~P~gIa-vDp~~g~LYWtD~g~~~----~I~ra~mD--Gs~r~v-- 689 (1416)
+++ |.... .+.. ..+ . .|.+|+ ++|..++||.++.+... .|....++ |..+.+
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~ 300 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeee
Confidence 765 44321 2221 111 2 588999 99998899999865431 56666664 332221
Q ss_pred EeecCCCCCeeEEeec---CCCeEEEecCCCCeEEEEeCCCCce
Q psy6572 690 IISKNLSWPNALTISY---ETNELFWGDAHEDYIAVSDLNGENI 730 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~---~~~rLYWtD~~~~~I~~~~ldG~~r 730 (1416)
++......|.+|++++ ..++||++....+.|...++++...
T Consensus 301 ~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred eeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 1222345789999998 5889999988888888888877633
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.34 E-value=8.3e-05 Score=85.47 Aligned_cols=215 Identities=11% Similarity=0.012 Sum_probs=130.8
Q ss_pred cEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEeecCC--------CceE
Q psy6572 547 KYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFPATS--------PDGL 614 (1416)
Q Consensus 547 ~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~l~~--------p~gL 614 (1416)
...|+.+++.... ++.......+.+++|.+.++.||++.... ..|+++.+.+. ....+.+.. |.+|
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--CcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence 4568888876544 12222222578899999888899987654 47888888732 222222322 8999
Q ss_pred EEEccCCcEEEeeCC-----------CCeEEEeecCCCc----eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEE
Q psy6572 615 TVDWVGRNLYWCDKG-----------LDTIEVAKLDGRF----RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGK 679 (1416)
Q Consensus 615 AvD~~~~~LYwtD~~-----------~~~I~v~~ldG~~----~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~r 679 (1416)
++++.++.||++... .+.|.+.++.... ..++. ....+.+|+++|... ||++.. .|.+
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-l~~~~~----~i~~ 170 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS-LYVAGP----DIYK 170 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-EEEESS----SEEE
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCc-EEEccC----cEEE
Confidence 999999999999854 5789999986521 12222 223578888999866 887642 2555
Q ss_pred EecCCCCCEEEeecC-----------------------------------------------------------------
Q psy6572 680 AKMDGSNPKVIISKN----------------------------------------------------------------- 694 (1416)
Q Consensus 680 a~mDGs~r~vlv~~~----------------------------------------------------------------- 694 (1416)
.++........+...
T Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 171 MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp ECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred EeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 555332211111110
Q ss_pred ---CCCCeeEEeec-CCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeE
Q psy6572 695 ---LSWPNALTISY-ETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIE 768 (1416)
Q Consensus 695 ---l~~P~gLaiD~-~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~ 768 (1416)
-..|.++++++ ..++||.+ .+.|..+++........+.. -..|.+|++. +.+||.+ ...+.|.
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~-~~~~~v~ 319 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANL-------DHTYYCVAFDKKGDKLYLG-GTFNDLA 319 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEEC-------SSCCCEEEECSSSSCEEEE-SBSSEEE
T ss_pred ccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcC-------CCCccceEECCCCCEEEEe-cCCCeEE
Confidence 01345666666 66777777 56888888765443333322 2346778875 4577775 4457788
Q ss_pred EecccCCCceEEE
Q psy6572 769 RCDKYTGKNCTSV 781 (1416)
Q Consensus 769 ~~nk~tG~~~~~l 781 (1416)
..+..+++....+
T Consensus 320 v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 320 VFNPDTLEKVKNI 332 (349)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeccccceeeee
Confidence 7776666544433
No 166
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.31 E-value=0.00014 Score=91.15 Aligned_cols=226 Identities=7% Similarity=-0.053 Sum_probs=146.9
Q ss_pred CeEEEEec--EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee---cCCCc
Q psy6572 540 PNLLFTNK--YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP---ATSPD 612 (1416)
Q Consensus 540 ~~li~s~~--~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~---l~~p~ 612 (1416)
.+++++++ ..|..+++.... ...+.....+.+++|.+.++.||++... ..|.++++. ...+++.. ...|+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d---g~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD---GKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCC---CeEEEEECCCCCCcEeEEEecCCCCc
Confidence 35666653 578888877654 2122233457799999999999998643 378999885 23333333 56799
Q ss_pred eEEEE----ccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCC----------CCCcceeeecCCcceEEEeeCCCCceE
Q psy6572 613 GLTVD----WVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKG----------LQEPRGIALNPAYGYMYWTDWGQNAHI 677 (1416)
Q Consensus 613 gLAvD----~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~----------l~~P~gIavDp~~g~LYWtD~g~~~~I 677 (1416)
+|+|. +.++.||+++...++|.+++..... ..++-..+ ..++.+|++.+....+|++- ....+|
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~~g~v 322 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KETGKI 322 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TTTTEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cCCCeE
Confidence 99999 5888999999999999999865433 22222211 11345777777655555554 444588
Q ss_pred EEEecCCCCCEEEee-cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEec-cCCCCcccccc-eeEEEe-
Q psy6572 678 GKAKMDGSNPKVIIS-KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSR-RMDPTINLHHV-FALAVF- 753 (1416)
Q Consensus 678 ~ra~mDGs~r~vlv~-~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~-~~~p~~~l~~P-~~lav~- 753 (1416)
..+++.......+.. ..-.+|.++.+++...+||.+....+.|..+++........+.. . ..+|| .++.++
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg-----~~Phpg~g~~~~~ 397 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGG-----QTPHPGRGANFVH 397 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----SSBCCTTCEEEEE
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC-----cCCCCccceeeEC
Confidence 888876543222222 23457889999998888999998899999999764433322322 2 26777 466543
Q ss_pred --cCcEEEee-cCCCeeEEecccC
Q psy6572 754 --EDHLFWTD-WEMKSIERCDKYT 774 (1416)
Q Consensus 754 --~d~LYwtD-~~~~~I~~~nk~t 774 (1416)
.+.+|.|. ...+.|..++..+
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCcEEEeCCCCCCeEEEecCCC
Confidence 25566554 3557788776554
No 167
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.25 E-value=2.7e-07 Score=99.02 Aligned_cols=65 Identities=29% Similarity=0.603 Sum_probs=50.0
Q ss_pred CcCCCCCCcccCC--CceecCceeecCCCCCCCCCCCCCCCCC--CCCCCCccCCCCCceecCCCCceecCcccccCCCC
Q psy6572 157 KMNCSGDKFLCRN--GNCILSRWRCDGDNDCNDGNDGLSSDEM--NCDTESTCKANNNVFQCDNNKTCISKSWVCDGTYD 232 (1416)
Q Consensus 157 ~~~C~~~~f~C~~--g~CI~~~~~CDg~~DC~Dg~d~~~sDE~--~C~~~~~C~~~~~~F~C~~~~~CI~~~w~CDg~~D 232 (1416)
..+|++.+|+|.+ |+|||.+|+|||+.||.|| |||. +|....++.. .+|.+ + .....
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~Dg-----SDE~~~~C~~~~~~~~--~~~~g----~--------~~~~~ 111 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDG-----SDEDPETCSLNITHVG--SSYTG----L--------ATWTS 111 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSS-----TTTSHHHHCCGGGCTT--CEEEE----E--------EEESS
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCC-----CccccCcCCCCcccCC--ccccc----c--------cCccc
Confidence 3579999999964 9999999999999999999 8997 7974225544 56765 1 22348
Q ss_pred CCCCCCCC
Q psy6572 233 CTDRSDEN 240 (1416)
Q Consensus 233 C~D~sDE~ 240 (1416)
|.++++|.
T Consensus 112 C~~~~pe~ 119 (217)
T 2gtl_M 112 CEDLNPDH 119 (217)
T ss_dssp SCSCCSEE
T ss_pred CCCCCCCe
Confidence 88888874
No 168
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.23 E-value=0.00026 Score=84.12 Aligned_cols=238 Identities=8% Similarity=-0.021 Sum_probs=133.3
Q ss_pred EEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccC-------CCccEEEEecCCC--CeEEee--------cCC
Q psy6572 549 YIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTM-------HGSSIRRSCNNSQ--PELLFP--------ATS 610 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~-------~~~~I~r~~l~s~--~~~l~~--------l~~ 610 (1416)
.|..+++.... ...+..-..+ +|+|.+.+++||+++... ....|.++++.+. ...+.- ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 45666665443 1112222346 999999999999997521 1135777776521 111110 146
Q ss_pred CceEEEEccCCcEEEeeCC-CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEE
Q psy6572 611 PDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKV 689 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~v 689 (1416)
|.+|+|++-++.||++... .++|.+++ .... ++.. -+..|..+.+.|..+++|++.+... ++..+++.|....+
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~dg-~~~~vd~~g~~~~~ 201 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS--SDDQ-LLSSPTCYHIHPGAPSTFYLLCAQG-GLAKTDHAGGAAGA 201 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCC--EEeE-EcCCCceEEEEeCCCceEEEEcCCC-CEEEEECCCcEEEE
Confidence 8999999999999999875 68899988 5432 2211 0334556777777778888877654 55555554332211
Q ss_pred Eee-c--CCCCCe--eEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCC---Cccccccee---EEE--ecCc
Q psy6572 690 IIS-K--NLSWPN--ALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDP---TINLHHVFA---LAV--FEDH 756 (1416)
Q Consensus 690 lv~-~--~l~~P~--gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p---~~~l~~P~~---lav--~~d~ 756 (1416)
+.. . .-..|. ..++....+++||+. ..+.|+.+++.+...+++..-.... ......|.+ +++ .+++
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ 280 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDG 280 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCE
Confidence 110 0 011121 122333456777765 4568888888765443332110000 000112333 333 4678
Q ss_pred EEEeec---------CCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 757 LFWTDW---------EMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 757 LYwtD~---------~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
||++.. ..+.|..++..+++....|. ....|.+|.+.
T Consensus 281 lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~~p~~i~~s 326 (373)
T 2mad_H 281 IYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVA 326 (373)
T ss_pred EEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCCCcCeEEEC
Confidence 999754 23578888877776655553 23357777664
No 169
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.23 E-value=6.9e-07 Score=79.24 Aligned_cols=44 Identities=36% Similarity=0.855 Sum_probs=40.6
Q ss_pred ccCCcCC--CCCccceeeecCC-eeeecCCCCcEEecCCCceEecCC
Q psy6572 494 VDTNECL--DRPCSHYCRNTLG-SYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 494 ~didEC~--~~~Csq~C~nt~g-sy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
+|+|||+ ++.|+|+|+|++| +|+|.|++||+|..|+++|..++.
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~de 49 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 49 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccc
Confidence 5899997 6899999999999 899999999999999999998764
No 170
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.22 E-value=7.9e-07 Score=103.47 Aligned_cols=69 Identities=41% Similarity=0.936 Sum_probs=61.5
Q ss_pred ccc--cceecCCceEEeeCCCceecCCCCCccc-cCCcCCC---CCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 464 CAH--ECIDLKIGYKCACRKGYQVHPEDKHLCV-DTNECLD---RPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 464 Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~-didEC~~---~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
|.+ .|++++++|+|.|++||. ++.|+ +++||.. ++|.+.|+|+.|+|+|.|++||.+..++++|++.+.
T Consensus 13 C~~~g~C~~~~~~~~C~C~~g~~-----g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~ 87 (317)
T 3h5c_B 13 CLHNGSCQDSIWGYTCTCSPGYE-----GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 87 (317)
T ss_dssp CTTTCCCCCCSSSCCCCCSSSCC-----SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECSS
T ss_pred CCCCCEeECCCCCeEEECCCCCc-----CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccccc
Confidence 544 689999999999999994 56898 9999984 899999999999999999999999999999998654
No 171
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.22 E-value=3.5e-05 Score=94.12 Aligned_cols=201 Identities=12% Similarity=0.072 Sum_probs=120.2
Q ss_pred ccceeeeeecC---CCeEEEeeccCC----------CccEEEEecC-C--------CCeEEee------cCCCceEEEEc
Q psy6572 567 TNAVGLDFDWV---DNCLYWSDVTMH----------GSSIRRSCNN-S--------QPELLFP------ATSPDGLTVDW 618 (1416)
Q Consensus 567 ~~~~~l~~D~~---~~~LYwtD~~~~----------~~~I~r~~l~-s--------~~~~l~~------l~~p~gLAvD~ 618 (1416)
..+.+|+|++. ++.||++-.... ..+|.|+.+. . ..++|+. ......|++++
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp 148 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP 148 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC
Confidence 44678999875 678998754321 1367787775 1 1345544 23455799997
Q ss_pred cCCcEEEeeCC-----------------CCeEEEeecCCCc-------------------eEEEEcCCCCCcceeeecCC
Q psy6572 619 VGRNLYWCDKG-----------------LDTIEVAKLDGRF-------------------RKVLINKGLQEPRGIALNPA 662 (1416)
Q Consensus 619 ~~~~LYwtD~~-----------------~~~I~v~~ldG~~-------------------~~vLi~~~l~~P~gIavDp~ 662 (1416)
.++||++-.. .++|.|++.+|.. +..|.+.++.+|.+||+||.
T Consensus 149 -DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 149 -DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp -TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred -CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 5699998421 3689999999941 23466689999999999998
Q ss_pred cc------eEEEeeC-CCC---ceEEEEecCCCC----CEEEeecCC--CCCeeEEeec------CCCeEEEecCCCCeE
Q psy6572 663 YG------YMYWTDW-GQN---AHIGKAKMDGSN----PKVIISKNL--SWPNALTISY------ETNELFWGDAHEDYI 720 (1416)
Q Consensus 663 ~g------~LYWtD~-g~~---~~I~ra~mDGs~----r~vlv~~~l--~~P~gLaiD~------~~~rLYWtD~~~~~I 720 (1416)
++ +||.+|. +.. ..|.++. .|.+ .-++.-..- ..|.|+++-. ..+.+|+++.. ++|
T Consensus 228 tg~~~G~l~~~~~D~~G~~~~~~ei~~i~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i 305 (463)
T 2wg3_C 228 PTDININLTILCSDSNGKNRSSARILQII-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNF 305 (463)
T ss_dssp CSSTTCSEEEEEECC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCE
T ss_pred CCCcccceEEEecccCCCCCCCCeEeeec-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcE
Confidence 65 7888885 322 3454442 1221 111111111 4678888832 23568999986 789
Q ss_pred EEEeCCCCc---eEEEE-eccC-C-CCcccccceeEEEe-cCcEEEeecC-------CCeeEEe
Q psy6572 721 AVSDLNGEN---IKIIV-SRRM-D-PTINLHHVFALAVF-EDHLFWTDWE-------MKSIERC 770 (1416)
Q Consensus 721 ~~~~ldG~~---r~~v~-~~~~-~-p~~~l~~P~~lav~-~d~LYwtD~~-------~~~I~~~ 770 (1416)
.++.+++.. ...++ .+.. . .......|.+|++. .+.||++++. .++|+|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri 369 (463)
T 2wg3_C 306 LTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKI 369 (463)
T ss_dssp EEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEE
T ss_pred EEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEe
Confidence 999876432 22222 1100 0 00124578888885 6799999983 5566665
No 172
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.21 E-value=7.3e-05 Score=85.37 Aligned_cols=146 Identities=10% Similarity=-0.077 Sum_probs=97.2
Q ss_pred CCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCC----CCCcceeeecCCcceEEEeeCC----------CC
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKG----LQEPRGIALNPAYGYMYWTDWG----------QN 674 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~----l~~P~gIavDp~~g~LYWtD~g----------~~ 674 (1416)
.|.+|++++.++.||++....+.|.+.++.... ...+.... ...|.+|+++|..++||++..+ ..
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 589999999999999999988999999986544 33333222 1269999999998899999521 23
Q ss_pred ceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEec
Q psy6572 675 AHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFE 754 (1416)
Q Consensus 675 ~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~ 754 (1416)
..|.+.++.+......+.. -..|.+|++++..++||++ .+.|..+++.+......+.... ...|..++..+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg 185 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQS-----WEAETYAQPDV 185 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTT-----TTTTTBCCCBC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccc-----cCCCceeCCCc
Confidence 5788888865433333332 3568999999888889999 3678899986654443333221 12344444344
Q ss_pred CcEEEeecCC
Q psy6572 755 DHLFWTDWEM 764 (1416)
Q Consensus 755 d~LYwtD~~~ 764 (1416)
.+||++....
T Consensus 186 ~~l~~~~~~~ 195 (337)
T 1pby_B 186 LAVWNQHESS 195 (337)
T ss_dssp CCCCCCCTTT
T ss_pred cEEeeeccCC
Confidence 4555554333
No 173
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.19 E-value=6.3e-07 Score=74.64 Aligned_cols=40 Identities=30% Similarity=0.814 Sum_probs=36.1
Q ss_pred CCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcC
Q psy6572 457 VSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNEC 499 (1416)
Q Consensus 457 ~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC 499 (1416)
..+++ |+|.|+|++++|+|.|++||+|. .|+++|++++||
T Consensus 3 ~~ng~--C~~~C~n~~gs~~C~C~~Gy~L~-~d~~tC~dide~ 42 (51)
T 1kig_L 3 LDNGG--CDQFCREERSEVRCSCAHGYVLG-DDSKSCVSTERF 42 (51)
T ss_dssp TTTTS--SSSCCCEETTEECCCCCTTEEEC-TTSSCEEECSSS
T ss_pred CCCCC--cCCEeEcCCCCeEEeCCCCcEEC-CCCCccccCCcc
Confidence 34556 99999999999999999999998 899999999996
No 174
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.18 E-value=2.5e-05 Score=94.20 Aligned_cols=107 Identities=12% Similarity=-0.002 Sum_probs=73.5
Q ss_pred cCCCeEEEeeccCCC--ccEEEEecCCCCeEEee---cCCCceEEEEccCCcEEEeeC---------CCCeEEEeecCCC
Q psy6572 576 WVDNCLYWSDVTMHG--SSIRRSCNNSQPELLFP---ATSPDGLTVDWVGRNLYWCDK---------GLDTIEVAKLDGR 641 (1416)
Q Consensus 576 ~~~~~LYwtD~~~~~--~~I~r~~l~s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~---------~~~~I~v~~ldG~ 641 (1416)
+..++||+++..... ..|.++++.+. +++.. ...| +|+|++.++.||+++. ..+.|.++++...
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~-~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG-RILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT-EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC-EEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 345789999875311 37888877632 22222 5678 9999999999999986 3457999887654
Q ss_pred c-eEEEEcC------CCCCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 642 F-RKVLINK------GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 642 ~-~~vLi~~------~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
. ...|... ....|.+|+|+|..++||++++.....|.++++..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 3 3333222 13579999999999999999865334566665543
No 175
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.18 E-value=1.5e-06 Score=107.60 Aligned_cols=108 Identities=21% Similarity=0.486 Sum_probs=71.0
Q ss_pred CCCCCCCCCCCCCCCceeecCCceeCCCcccCCCCCCCCC-CCCCCCCC-CCCCCCCCCCCCceecCCCCceecCCcccC
Q psy6572 57 GDGSDEADCSTCGNDTFHCDMGMCIHKALRCDVDPDCPDA-SDEMHCPM-TNCTEKYPLMTNPIHCNFTSACIEESYICD 134 (1416)
Q Consensus 57 ~d~sDE~~C~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~-sDE~~C~~-~~C~~~~~~~~~~f~C~~~~~CI~~~~~CD 134 (1416)
++.|.=..|..|...+|+-. .|.......|. .|... .|+..|.. ++|+.....+ +.|+|..+++||+..|+||
T Consensus 12 s~ws~Ws~C~~C~~~~~R~R---~v~~p~q~gG~-~C~~~l~d~~~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cd 86 (554)
T 3ojy_A 12 SNWSEWTDCFPCQDKKYRHR---SLLQPNKFGGT-ICSGDIWDQASCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCN 86 (554)
T ss_dssp CCCCCCCCCCTTTCEEEEEC---CEEECBCSSCC-CCCSCSEEEEECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTS
T ss_pred CCCCCCCCCCCCCCccEeeE---eeccccccCCC-CCCCccccccCCCCCCCCcccCCCC-CcCccCCCCEEcccccccC
Confidence 45566666766766666554 35555555554 47654 67777753 6675432232 4599984569999999999
Q ss_pred CCCCCCCCCCccccccccCCCCCcCCCCCCcccCCCceecCcee
Q psy6572 135 GQNDCFDMSDEQNCDQIKDVSPKMNCSGDKFLCRNGNCILSRWR 178 (1416)
Q Consensus 135 g~~DC~D~sDE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~~~~~ 178 (1416)
|++||.|+|||.+|.. .+...+.|+....||..++
T Consensus 87 g~~dC~d~sDE~~C~~---------~~~~~~~C~~~~~iPg~~l 121 (554)
T 3ojy_A 87 GDQDCLDGSDEDDCED---------VRAIDEDCSQYEPIPGSQK 121 (554)
T ss_dssp SSCCSSSCTTSSSCCS---------CCCCCTTTTTSCBCTTHHH
T ss_pred CcccCCCccccccCCC---------CCCCccccccccccCcccc
Confidence 9999999999999962 2223456766666665555
No 176
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.18 E-value=0.00016 Score=86.98 Aligned_cols=221 Identities=11% Similarity=0.054 Sum_probs=147.8
Q ss_pred EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEE
Q psy6572 548 YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLY 624 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LY 624 (1416)
..|+.+++++.. ..+......+.+++|.+.+++|+++........|+.+.+. +....+.. ...+..+++.+.+..|+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA 238 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEE
Confidence 688888888766 4444445567889999999999888765323478888887 44444444 44567889988888899
Q ss_pred EeeCC--CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeC-CCCceEEEEecCCCCCEEEeecCCCCCeeE
Q psy6572 625 WCDKG--LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKMDGSNPKVIISKNLSWPNAL 701 (1416)
Q Consensus 625 wtD~~--~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~mDGs~r~vlv~~~l~~P~gL 701 (1416)
++... ...|++.++.+...+.|. ........+++.|...+|+++.. +...+|++.++++...+.+.. ...+...+
T Consensus 239 ~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~ 316 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW-EGSQNQDA 316 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC-SSSEEEEE
T ss_pred EEEecCCCceEEEEECCCCCEEeCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec-CCCcccCe
Confidence 87654 456999998876554443 33345778999999887887753 334589999998776544432 23445678
Q ss_pred EeecCCCeEEEecCC--CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCC--eeEEecccCC
Q psy6572 702 TISYETNELFWGDAH--EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMK--SIERCDKYTG 775 (1416)
Q Consensus 702 aiD~~~~rLYWtD~~--~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~--~I~~~nk~tG 775 (1416)
++.+...+|+++... ...|..+++++...+.+.. . ....++++. +.+|+++....+ .|+.++.. |
T Consensus 317 ~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~-~-------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g 387 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS-T-------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-G 387 (415)
T ss_dssp EECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC-S-------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-S
T ss_pred EECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC-C-------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-C
Confidence 888878888887654 3589999988766654322 1 145566664 345666554443 57776643 4
Q ss_pred CceE
Q psy6572 776 KNCT 779 (1416)
Q Consensus 776 ~~~~ 779 (1416)
....
T Consensus 388 ~~~~ 391 (415)
T 2hqs_A 388 RFKA 391 (415)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 4333
No 177
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.17 E-value=2.9e-06 Score=105.79 Aligned_cols=83 Identities=28% Similarity=0.698 Sum_probs=68.2
Q ss_pred CCc-ccccccCCCCCCcccc-----cceecCCceEEe-eCCCceecC----------CCCCccccCCcCC--CCCcc--c
Q psy6572 448 FSC-FVNECNVSHGGQLCAH-----ECIDLKIGYKCA-CRKGYQVHP----------EDKHLCVDTNECL--DRPCS--H 506 (1416)
Q Consensus 448 ~~C-~i~eC~~~~~~~~Cs~-----~C~nt~~gy~C~-C~~Gy~L~p----------~d~~tC~didEC~--~~~Cs--q 506 (1416)
..| +|+||...++. |.+ .|++++++|+|. |++||.... .++++|++++||. .++|. .
T Consensus 39 ~~CeDiDEC~~~p~~--C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~ 116 (634)
T 1yo8_A 39 THCEDLDECALVPDI--CFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHA 116 (634)
T ss_dssp SSCCBCCTTTTSCCC--SCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTE
T ss_pred CCccccccccCCCCc--ccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCc
Confidence 456 68889766655 876 799999999999 999998752 2466799999998 46997 5
Q ss_pred eeeecC----CeeeecCCCCcEEecCCCceEe
Q psy6572 507 YCRNTL----GSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 507 ~C~nt~----gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
.|+|+. ++|+|.|++||. .++++|..
T Consensus 117 ~Cvnt~~~~~GsY~C~C~~Gy~--GdG~~Ce~ 146 (634)
T 1yo8_A 117 ECIYLGHFSDPMYKCECQTGYA--GDGLICGE 146 (634)
T ss_dssp EEEECCTTCSSSEEEEECTTEE--ESSSSEEE
T ss_pred cccccccccccceeeeccCCcc--ccCccccc
Confidence 899999 999999999997 46678864
No 178
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.17 E-value=8.8e-07 Score=74.37 Aligned_cols=43 Identities=33% Similarity=0.675 Sum_probs=37.7
Q ss_pred ccCCCCCCcccccceecCC-ceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 455 CNVSHGGQLCAHECIDLKI-GYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 455 C~~~~~~~~Cs~~C~nt~~-gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
|...+++ |+|.|+++++ +|+|+|++||+|. .|+++|++++||.
T Consensus 2 C~~~ngg--C~~~C~n~~ggs~~C~C~~Gy~L~-~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 2 CVNENGG--CEQYCSDHTGTKRSCRCHEGYSLL-ADGVSCTPTVEYP 45 (53)
T ss_dssp TTSGGGG--CSSEEEEETTTEEEEECCTTEEEC-TTSSCEEECSSSC
T ss_pred CcCCCCC--cCCEeEcCCCCCEEeeCCCCCEEC-CCCCcccCCcccc
Confidence 4444566 9999999999 7999999999998 8999999999984
No 179
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.15 E-value=3.7e-06 Score=85.14 Aligned_cols=70 Identities=34% Similarity=0.923 Sum_probs=56.9
Q ss_pred ccccccCCCCCCccc--ccceecCCceEEeeCCCceecCCCCCccc-cCCcCCCCCccc--eeeecCCeeeecCCCCcEE
Q psy6572 451 FVNECNVSHGGQLCA--HECIDLKIGYKCACRKGYQVHPEDKHLCV-DTNECLDRPCSH--YCRNTLGSYSCSCAPGYAL 525 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs--~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~-didEC~~~~Csq--~C~nt~gsy~C~C~~Gy~L 525 (1416)
++++|...+ |. ..|++++++|+|.|++||. +..|. ++++|...+|.+ .|+++.++|+|.|++||+
T Consensus 44 ~~~~C~~~~----C~~~~~C~~~~g~~~C~C~~G~~-----G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~- 113 (135)
T 2vj3_A 44 DVNECVSNP----CQNDATCLDQIGEFQCICMPGYE-----GVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFT- 113 (135)
T ss_dssp ECCTTTTCC----CCSSCEEEECSSCEEEECCTTEE-----SSSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEE-
T ss_pred cCccCCCCC----CCCCCEEeCCCCCceeeCCCCCc-----CCcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCc-
Confidence 466775433 54 4799999999999999996 34685 799998778875 899999999999999997
Q ss_pred ecCCCceE
Q psy6572 526 LSDKHGCK 533 (1416)
Q Consensus 526 ~~dg~sC~ 533 (1416)
|+.|.
T Consensus 114 ---G~~C~ 118 (135)
T 2vj3_A 114 ---GHLCQ 118 (135)
T ss_dssp ---SSSSC
T ss_pred ---CCccC
Confidence 56673
No 180
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.13 E-value=5.9e-05 Score=84.44 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=109.3
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecC-CCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC-CEE
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN-PKV 689 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~-r~v 689 (1416)
.||+++ ++.||.+....++|.++++. |+....++ ..-....||+++ .++||.+.|..+ +|.+.+..-.. ...
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l-~~~~FgeGit~~--g~~Ly~ltw~~~-~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMER-LGNIFAEGLASD--GERLYQLTWTEG-LLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEE-CTTCCEEEEEEC--SSCEEEEESSSC-EEEEEETTTTEEEEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEEC-CCCcceeEEEEe--CCEEEEEEccCC-EEEEEECCcCcEEEE
Confidence 688887 68999999998899999986 44444443 222223456665 579999999765 78887765322 222
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC-CceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeE
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNG-ENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIE 768 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG-~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~ 768 (1416)
|-. -..+.||+-| .++||.+| +.++|..++... ...+.|.... .+..+..+..|.+.+++||...|.++.|.
T Consensus 132 i~~--~~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~--~g~~v~~lNeLe~~dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 132 TRY--SGEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL--RGQPVELINELECANGVIYANIWHSSDVL 204 (268)
T ss_dssp EEC--SSCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEE--TTEECCCEEEEEEETTEEEEEETTCSEEE
T ss_pred EeC--CCceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC--CCcccccccccEEeCCEEEEEECCCCeEE
Confidence 222 1234567765 78999999 588999999654 4444443321 11124455677888999999999999999
Q ss_pred EecccCCCceEEEE
Q psy6572 769 RCDKYTGKNCTSVV 782 (1416)
Q Consensus 769 ~~nk~tG~~~~~l~ 782 (1416)
+++..+|+...++-
T Consensus 205 vIDp~TG~V~~~Id 218 (268)
T 3nok_A 205 EIDPATGTVVGVID 218 (268)
T ss_dssp EECTTTCBEEEEEE
T ss_pred EEeCCCCcEEEEEE
Confidence 99999998766664
No 181
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.13 E-value=1.5e-06 Score=73.72 Aligned_cols=41 Identities=32% Similarity=0.789 Sum_probs=37.5
Q ss_pred CcCC--CCCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 497 NECL--DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 497 dEC~--~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
|||+ +++|+|+|+|++|+|+|.|++||+|..|+++|++++.
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 6786 5789999999999999999999999999999998864
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.13 E-value=0.0002 Score=89.81 Aligned_cols=211 Identities=12% Similarity=0.003 Sum_probs=133.7
Q ss_pred eeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecC---CCceEEEE
Q psy6572 573 DFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD---GRFRKVLI 647 (1416)
Q Consensus 573 ~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld---G~~~~vLi 647 (1416)
.+|+ .+++|++....+ .|..+++.+. ....+. ...|.+|++.+.++.||++.. .+.|.++++. ++....|.
T Consensus 162 ~~d~-~~~~~V~~~~~~--~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 162 DWDL-ENLFSVTLRDAG--QIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp CCCG-GGEEEEEETTTT--EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEE
T ss_pred ccCC-CceEEEEeCCCC--eEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEe
Confidence 3554 578888887754 8888887733 221222 557899999999999999874 5789999994 33333332
Q ss_pred cCCCCCcceeeec----CCcceEEEeeCCCCceEEEEecCCCCCEEE--eecC---C--------CCCeeEEeecCCCeE
Q psy6572 648 NKGLQEPRGIALN----PAYGYMYWTDWGQNAHIGKAKMDGSNPKVI--ISKN---L--------SWPNALTISYETNEL 710 (1416)
Q Consensus 648 ~~~l~~P~gIavD----p~~g~LYWtD~g~~~~I~ra~mDGs~r~vl--v~~~---l--------~~P~gLaiD~~~~rL 710 (1416)
....|++|+++ |..++||++.... ..|..++ +...+++ +... . ..+.+|++.+....+
T Consensus 238 --~G~~P~~ia~s~~~~pDGk~l~v~n~~~-~~v~ViD--~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 238 --IGSEARSIETSKMEGWEDKYAIAGAYWP-PQYVIMD--GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF 312 (567)
T ss_dssp --CCSEEEEEEECCSTTCTTTEEEEEEEET-TEEEEEE--TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE
T ss_pred --cCCCCceeEEccccCCCCCEEEEEEccC-CeEEEEE--CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEE
Confidence 23469999999 5878999998643 3566654 3333332 2211 0 134577776655666
Q ss_pred EEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEE--ecCcEEEeecCCCeeEEecccCCCceEEEEe-CCCC
Q psy6572 711 FWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAV--FEDHLFWTDWEMKSIERCDKYTGKNCTSVVK-NLVH 787 (1416)
Q Consensus 711 YWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav--~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~~-~~~~ 787 (1416)
|+.-...+.|..+++.......+.... .-.+|.++.+ .+.+||.+...+++|..++..+++....+.. ....
T Consensus 313 vv~~~~~g~v~~vd~~~~~~~~v~~i~-----~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNNLKTTEIS-----AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp EEEETTTTEEEEEETTCSSEEEEEEEE-----CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred EEEecCCCeEEEEecCCCccceeeeee-----ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 766677889999998654322222211 0234555555 5678999999999999999888765544432 2233
Q ss_pred CC-eeeeeecc
Q psy6572 788 KP-MDLRVYHP 797 (1416)
Q Consensus 788 ~p-~~I~v~h~ 797 (1416)
+| .++.++||
T Consensus 388 hpg~g~~~~~p 398 (567)
T 1qks_A 388 HPGRGANFVHP 398 (567)
T ss_dssp CCTTCEEEEET
T ss_pred CCccceeeECC
Confidence 44 35555555
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.11 E-value=0.00057 Score=77.55 Aligned_cols=202 Identities=10% Similarity=0.074 Sum_probs=127.9
Q ss_pred EEEEEEec-CCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee--c---CCCceEEEEcc
Q psy6572 548 YYIREVTQ-AGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP--A---TSPDGLTVDWV 619 (1416)
Q Consensus 548 ~~I~~i~l-~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~--l---~~p~gLAvD~~ 619 (1416)
..|..++. .|.. ++.......+..+++.+.++ ||++.. ..|+.++.+++ ++-. . ..+.++++. .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs~~----~~V~~~d~~G~--~~W~~~~~~~~~~~~~~~~-~ 86 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFSYS----KGAKMITRDGR--ELWNIAAPAGCEMQTARIL-P 86 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEECB----SEEEEECTTSC--EEEEEECCTTCEEEEEEEC-T
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEeCC----CCEEEECCCCC--EEEEEcCCCCccccccEEC-C
Confidence 44555665 3433 22222213456677776544 444321 25666665422 2222 1 123345554 4
Q ss_pred CCcEEEeeCC-CCeEEEeecCCCceEEEEc-C----CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec
Q psy6572 620 GRNLYWCDKG-LDTIEVAKLDGRFRKVLIN-K----GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK 693 (1416)
Q Consensus 620 ~~~LYwtD~~-~~~I~v~~ldG~~~~vLi~-~----~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~ 693 (1416)
.+++++++.+ ..+|..++.+|+....+.. . ....|+++++++. |.+++++... .+|...+.+|.....+-.
T Consensus 87 dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~-~~v~~~d~~G~~~w~~~~- 163 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFAT-SEVREIAPNGQLLNSVKL- 163 (276)
T ss_dssp TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTT-TEEEEECTTSCEEEEEEC-
T ss_pred CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecCC-CEEEEECCCCCEEEEEEC-
Confidence 6778888877 7889888999987544432 2 2246888999876 5666777554 488888888765444433
Q ss_pred CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEEEeccCCCCcccccceeEEE-ecCcEEEeecC
Q psy6572 694 NLSWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKIIVSRRMDPTINLHHVFALAV-FEDHLFWTDWE 763 (1416)
Q Consensus 694 ~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v~~~~~~p~~~l~~P~~lav-~~d~LYwtD~~ 763 (1416)
-.+|.++++. .++.+|+++...++|..++.+ |+.+..+.... .+...+..|.++++ .++.||++++.
T Consensus 164 -~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 164 -SGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNAND-IEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp -SSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGG-SBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred -CCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCC-CCCccccccccceEcCCCCEEEEecc
Confidence 2578888886 478899999888899999988 88877776432 12223667888888 47899999973
No 184
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.10 E-value=2.6e-06 Score=105.50 Aligned_cols=99 Identities=21% Similarity=0.441 Sum_probs=64.0
Q ss_pred CCCCCCCCCCCCCCceeecCCceeCCCcccCCCCCCCC-CCCCCCCC-CCCCCCCCCCCCCceecCCCCceecCCcccCC
Q psy6572 58 DGSDEADCSTCGNDTFHCDMGMCIHKALRCDVDPDCPD-ASDEMHCP-MTNCTEKYPLMTNPIHCNFTSACIEESYICDG 135 (1416)
Q Consensus 58 d~sDE~~C~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d-~sDE~~C~-~~~C~~~~~~~~~~f~C~~~~~CI~~~~~CDg 135 (1416)
+.|.=..|..|...++|-. .|.......| ..|.+ ..|+..|. .+.|+..... ..|+|..+++||+..|+|||
T Consensus 15 ~ws~Ws~C~~C~~~~~R~R---~v~~p~q~gG-~~C~~~l~d~~~C~~~~~C~~~~~c--~~f~C~~~g~Ci~~~~~Cdg 88 (537)
T 3ojy_B 15 SWSSWTTCDPCQKKRYRYA---YLLQPSQFHG-EPCNFSDKEVEDCVTNRPCRSQVRC--EGFVCAQTGRCVNRRLLCNG 88 (537)
T ss_dssp CCCCCCCCBTTTTEEEEEC---CEEECEETTC-CCCCSCSEEEEECCCCCCCCCCSCC--SSEECTTTCCEECGGGTTSS
T ss_pred CCCCCCCCCCCCCceEeee---eeccccccCC-CcCccchhhhccCCCccccccCCCC--CccCcCCCCcEeeccccCCC
Confidence 5555556655665555543 3444444433 44543 45666673 3556432111 34999845699999999999
Q ss_pred CCCCCCCCCccccccccCCCCCcCCCCCCcccCCCceec
Q psy6572 136 QNDCFDMSDEQNCDQIKDVSPKMNCSGDKFLCRNGNCIL 174 (1416)
Q Consensus 136 ~~DC~D~sDE~~C~~~~~~~~~~~C~~~~f~C~~g~CI~ 174 (1416)
++||.|+|||.+|.. .++.|..+++||
T Consensus 89 ~~dC~d~sdE~~c~~------------~~~~C~~~~~~~ 115 (537)
T 3ojy_B 89 DNDCGDQSDEANCRR------------IYKKCQHEMDQY 115 (537)
T ss_dssp SCCSSSSCTTSSCSS------------CSSCCSSCCBCC
T ss_pred CCCCCCccccccCCC------------CCCccccCcCCC
Confidence 999999999998862 346777777777
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.08 E-value=0.00037 Score=82.23 Aligned_cols=248 Identities=6% Similarity=-0.019 Sum_probs=132.4
Q ss_pred CeEEEEe-------cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccC-------CCccEEEEecCC-CC-
Q psy6572 540 PNLLFTN-------KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTM-------HGSSIRRSCNNS-QP- 602 (1416)
Q Consensus 540 ~~li~s~-------~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~-------~~~~I~r~~l~s-~~- 602 (1416)
.++|+++ ...|+.+++.... ...+.....| +|+|++.+++||.+.... ....|.++.+.+ ..
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 3566655 2367777765433 2222223456 999999999999997420 013577777662 21
Q ss_pred eEEee-------cCCCceEEEEccCCcEEEeeCC-CCeEEEeecCCCceEEEEc-CCCCCcceeeecCCcceEEEeeCCC
Q psy6572 603 ELLFP-------ATSPDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRFRKVLIN-KGLQEPRGIALNPAYGYMYWTDWGQ 673 (1416)
Q Consensus 603 ~~l~~-------l~~p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~~~vLi~-~~l~~P~gIavDp~~g~LYWtD~g~ 673 (1416)
..+.. ...|.+|+|++.++.||.++.. .++|.+.++.... ++.. -......++++.|..+..|++-...
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~--~~~~~i~~~~~~~v~~~p~~~~~~~~~~~d 172 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD--YVEDVTAAAGCWSVIPQPNRPRSFMTICGD 172 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE--EEEEEGGGTTEEEEEECTTSSSEEEEEETT
T ss_pred EEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc--EEEEEecCCCcceeEEcCCCCeeEEEECCC
Confidence 12211 2579999999999999999976 6889999987542 2221 1111222344555544445443332
Q ss_pred CceEEEEecCCCCCEE-Eee-----cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCC--c-cc
Q psy6572 674 NAHIGKAKMDGSNPKV-IIS-----KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPT--I-NL 744 (1416)
Q Consensus 674 ~~~I~ra~mDGs~r~v-lv~-----~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~--~-~l 744 (1416)
. ++..+.++..++.+ ... ..-..|..+...+....+||.. ..+.|+.+++.+...+++........ . ..
T Consensus 173 g-~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 173 G-GLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS-YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp S-SEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB-TTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred C-cEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe-CCCeEEEEEecCCCceecccccccCccccccc
Confidence 2 34334443322222 111 0111233333333344566554 34678888876554443322110000 0 00
Q ss_pred ccce---eEEEe--cCcEEEeec----------CCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 745 HHVF---ALAVF--EDHLFWTDW----------EMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 745 ~~P~---~lav~--~d~LYwtD~----------~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
..|. .+++. +++||++.. ....|..++..+++....+. .. . |.+|++.
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~-~-p~~ia~s 313 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GR-D-ALSMTID 313 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CT-T-CCEEEEE
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cC-C-eeEEEEC
Confidence 1132 25553 578998754 13578888887777665554 22 2 8888765
No 186
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.08 E-value=1e-06 Score=94.44 Aligned_cols=82 Identities=32% Similarity=0.713 Sum_probs=63.9
Q ss_pred CCc-ccccccCC--CCCCcccc--cceecC-----CceEEeeCCCceecCCCCCccccCCcCCCCCcc--ceee----ec
Q psy6572 448 FSC-FVNECNVS--HGGQLCAH--ECIDLK-----IGYKCACRKGYQVHPEDKHLCVDTNECLDRPCS--HYCR----NT 511 (1416)
Q Consensus 448 ~~C-~i~eC~~~--~~~~~Cs~--~C~nt~-----~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Cs--q~C~----nt 511 (1416)
..| ++++|... ... |.+ .|++++ ++|+|.|++||.+. ...|. +++|...+|. ..|+ ++
T Consensus 39 ~~C~~id~C~~~~~~~~--C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~---~~~C~-~d~C~~~~C~~~g~C~~~~~~~ 112 (186)
T 1z1y_A 39 NTCEEXNECXXETLGXA--CGEFGQCIENPDPAQVNMYXCGCIEGYTLX---EDTCV-LDVCQYXNCGESGECIVEYLSE 112 (186)
T ss_dssp TEEEECCCCSGGGTTSE--EETTEEEEECSSTTSSCSEEEEECTTEEEE---TTEEE-EGGGTTCCCCTTEEEEEEEETT
T ss_pred CccCCCCcccCCCCCCC--CCCCCEeecCCCCcCCCCEECCCCCCCccC---CCCCC-CCcCcCCCCCCCCEEeeCCcCC
Confidence 456 67888633 223 874 799999 89999999999875 23677 7899866676 3676 89
Q ss_pred CCeeeecCCCCcEEec-CCCceEec
Q psy6572 512 LGSYSCSCAPGYALLS-DKHGCKAT 535 (1416)
Q Consensus 512 ~gsy~C~C~~Gy~L~~-dg~sC~a~ 535 (1416)
.++|+|.|++||++.. +++.|..+
T Consensus 113 ~g~~~C~C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 113 IQSAGCSCAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp EEEEEEEECTEEEEETTTTTEEEEE
T ss_pred CCCceEECCCCCcccCCCCCcceEc
Confidence 9999999999999876 77889764
No 187
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.07 E-value=0.00025 Score=84.26 Aligned_cols=244 Identities=10% Similarity=0.005 Sum_probs=134.1
Q ss_pred CCeEEEEec------EEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccC-------CCccEEEEecCCCC-
Q psy6572 539 PPNLLFTNK------YYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTM-------HGSSIRRSCNNSQP- 602 (1416)
Q Consensus 539 ~~~li~s~~------~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~-------~~~~I~r~~l~s~~- 602 (1416)
...+|+++. ..|..|++.... ..+..+ ..|. |++.+.+++||+++... ....|.+++..+..
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v 121 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 121 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE
Confidence 446777764 468888876655 222223 3354 99999999999998421 01257777766321
Q ss_pred -eEEee--------cCCCceEEEEccCCcEEEeeCC-CCeEEEeecCCCc-eEEEEcCC--CCCcce----eeecCCcce
Q psy6572 603 -ELLFP--------ATSPDGLTVDWVGRNLYWCDKG-LDTIEVAKLDGRF-RKVLINKG--LQEPRG----IALNPAYGY 665 (1416)
Q Consensus 603 -~~l~~--------l~~p~gLAvD~~~~~LYwtD~~-~~~I~v~~ldG~~-~~vLi~~~--l~~P~g----IavDp~~g~ 665 (1416)
..|.- ...|.+|+|++-++.||+++.. .+.|.++++.... ...|-..+ ...|.| +++-+. |.
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~D-G~ 200 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRD-GS 200 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT-SC
T ss_pred EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCC-CC
Confidence 12211 1379999999999999999875 6899999987554 23332111 112333 244443 33
Q ss_pred EEEeeCCCCceEEEEecCCCCCEEEeecCCCCCee--EEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccC-----
Q psy6572 666 MYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNA--LTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRM----- 738 (1416)
Q Consensus 666 LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~g--LaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~----- 738 (1416)
|++.+.+...++.... ..++. ....|.. ++++...+++||+-. .+.|+.+++.+...+++..-..
T Consensus 201 ~~~v~~~~~g~v~~~~------~~~~~-~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 201 LAKVAFGTEGTPEITH------TEVFH-PEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEEEECCSSSCCEEEE------CCCCS-CTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EEEEECCCCCeEEEee------cceec-cccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceecccccc
Confidence 3333333211221100 00111 0112222 355656788777554 5789999998776654322100
Q ss_pred -CCCc--ccccceeEEEecCcEEEeecC---------CCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 739 -DPTI--NLHHVFALAVFEDHLFWTDWE---------MKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 739 -~p~~--~l~~P~~lav~~d~LYwtD~~---------~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
.++. .-..++++.-..++||++... .+.|..++..+++....+. .-..|.+|.+-
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~--vg~~~~~lavs 339 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINVS 339 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEEC
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE--CCCCcceEEEC
Confidence 0000 011345554457899998642 3568888888877665553 11245566653
No 188
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.04 E-value=0.00047 Score=82.72 Aligned_cols=194 Identities=12% Similarity=-0.022 Sum_probs=119.3
Q ss_pred ccccceeeeeecCCCeEEEeeccCC----CccEEEEecCCCCeEEee---cCCCc----eEEEEccCCcEEEeeCC----
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMH----GSSIRRSCNNSQPELLFP---ATSPD----GLTVDWVGRNLYWCDKG---- 629 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~----~~~I~r~~l~s~~~~l~~---l~~p~----gLAvD~~~~~LYwtD~~---- 629 (1416)
+...|.++..-+.+ ||++..... .+.|..++..+ .+++.. -..|. ++.+.+..+.||.++++
T Consensus 136 g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~ 212 (462)
T 2ece_A 136 GYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYS-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNT 212 (462)
T ss_dssp CEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTT-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHH
T ss_pred CCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCC-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccc
Confidence 44467777776554 888766531 13566665552 223333 22333 35556678889989864
Q ss_pred --------------CCeEEEeecCCCc-eEEEEcC-CCCCcceeee--cCCcceEEEeeC----CCCceEEEEecCCCC-
Q psy6572 630 --------------LDTIEVAKLDGRF-RKVLINK-GLQEPRGIAL--NPAYGYMYWTDW----GQNAHIGKAKMDGSN- 686 (1416)
Q Consensus 630 --------------~~~I~v~~ldG~~-~~vLi~~-~l~~P~gIav--Dp~~g~LYWtD~----g~~~~I~ra~mDGs~- 686 (1416)
.++|.+.+++... ..+|-.. ....|+.|++ +|...++|++.. .....|.+...++..
T Consensus 213 ~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~ 292 (462)
T 2ece_A 213 IEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW 292 (462)
T ss_dssp HTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE
T ss_pred cccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce
Confidence 6899999998642 2222221 2246888866 999999999874 023467776666521
Q ss_pred --CEEE-eec-----C-----------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEEEeccCCC------
Q psy6572 687 --PKVI-ISK-----N-----------LSWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKIIVSRRMDP------ 740 (1416)
Q Consensus 687 --r~vl-v~~-----~-----------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v~~~~~~p------ 740 (1416)
.++| +.. . -..|.+|.|.+..++||++.+..+.|..++++ ....+++..-....
T Consensus 293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~ 372 (462)
T 2ece_A 293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRAD 372 (462)
T ss_dssp EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBC
T ss_pred eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccc
Confidence 1111 111 1 14589999999999999999999999999974 43344332211000
Q ss_pred ----CcccccceeEEEe--cCcEEEee
Q psy6572 741 ----TINLHHVFALAVF--EDHLFWTD 761 (1416)
Q Consensus 741 ----~~~l~~P~~lav~--~d~LYwtD 761 (1416)
......|..|++. +.+||+|+
T Consensus 373 ~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 373 HPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0001258888884 77999999
No 189
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.04 E-value=2.7e-06 Score=105.35 Aligned_cols=81 Identities=28% Similarity=0.650 Sum_probs=58.2
Q ss_pred ceecCCcccCCCCCCC-CCCCccccccccCCCCCcCCCCCCcccC-CCceecCceeecCCCCCCCCCCCCCCCCCCCCCC
Q psy6572 125 ACIEESYICDGQNDCF-DMSDEQNCDQIKDVSPKMNCSGDKFLCR-NGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTE 202 (1416)
Q Consensus 125 ~CI~~~~~CDg~~DC~-D~sDE~~C~~~~~~~~~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~ 202 (1416)
|.|.......|. .|. ...|+..|.....=.....| .+|+|. ||+||+..|+|||++||+|| |||.+|..
T Consensus 33 R~v~~p~q~gG~-~C~~~l~d~~~C~~~~~C~~~~~c--~~f~C~~~g~Ci~~~~~Cdg~~dC~d~-----sdE~~c~~- 103 (537)
T 3ojy_B 33 AYLLQPSQFHGE-PCNFSDKEVEDCVTNRPCRSQVRC--EGFVCAQTGRCVNRRLLCNGDNDCGDQ-----SDEANCRR- 103 (537)
T ss_dssp CCEEECEETTCC-CCCSCSEEEEECCCCCCCCCCSCC--SSEECTTTCCEECGGGTTSSSCCSSSS-----CTTSSCSS-
T ss_pred eeeccccccCCC-cCccchhhhccCCCccccccCCCC--CccCcCCCCcEeeccccCCCCCCCCCc-----cccccCCC-
Confidence 567666676664 565 45788888531100112345 799999 99999999999999999999 99999952
Q ss_pred CccCCCCCceecCCCCceec
Q psy6572 203 STCKANNNVFQCDNNKTCIS 222 (1416)
Q Consensus 203 ~~C~~~~~~F~C~~~~~CI~ 222 (1416)
.++.| ...++||
T Consensus 104 -------~~~~C-~~~~~~~ 115 (537)
T 3ojy_B 104 -------IYKKC-QHEMDQY 115 (537)
T ss_dssp -------CSSCC-SSCCBCC
T ss_pred -------CCCcc-ccCcCCC
Confidence 34678 5557777
No 190
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.03 E-value=3.5e-06 Score=70.73 Aligned_cols=41 Identities=51% Similarity=1.187 Sum_probs=37.0
Q ss_pred ccCCcCCC----------CCccceeeecCCeeeecCCCCcEEecCCCceEe
Q psy6572 494 VDTNECLD----------RPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 494 ~didEC~~----------~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
+|||||.. ++|.|+|+|++|+|+|.|++||+|..++++|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 47889973 689999999999999999999999999999975
No 191
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.03 E-value=2.7e-06 Score=89.00 Aligned_cols=71 Identities=34% Similarity=0.728 Sum_probs=53.7
Q ss_pred ccccccCCCCCCcc-cccceecCCceEEeeCCCceecCCCCCccccCCc--CC--CCCc----cceeeecCC----eeee
Q psy6572 451 FVNECNVSHGGQLC-AHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNE--CL--DRPC----SHYCRNTLG----SYSC 517 (1416)
Q Consensus 451 ~i~eC~~~~~~~~C-s~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didE--C~--~~~C----sq~C~nt~g----sy~C 517 (1416)
+|+||.. ..+ | .+.|+|++++|+|.|++||.|. .++++|++++| |. ..+| ...|+++.+ +|+|
T Consensus 2 dideC~~-~~~--C~~~~C~n~~gsy~C~C~~Gy~~~-~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 2 DVNECLD-PTT--CISGNCVNTPGSYICDCPPDFELN-PTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCGGGS-TTS--SBTSEEEEETTEEEEECCTTCEEC-TTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred ccccCCC-CCC--CCCCEeECCCCCEEEeCCCCCeEC-CCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence 4778863 223 7 4689999999999999999998 68899999998 86 3334 457888887 7999
Q ss_pred cCCCCcEE
Q psy6572 518 SCAPGYAL 525 (1416)
Q Consensus 518 ~C~~Gy~L 525 (1416)
.|++||.+
T Consensus 78 ~C~~G~~~ 85 (162)
T 1uzk_A 78 CCSLGKAW 85 (162)
T ss_dssp HTTTCCEE
T ss_pred eCCCCCCc
Confidence 99998875
No 192
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.00 E-value=6.3e-06 Score=84.19 Aligned_cols=72 Identities=31% Similarity=0.846 Sum_probs=56.9
Q ss_pred ccccccCCCCCCcccc--cce-------ecCCceEEeeCCCceecCCCCCccc-cCCcCCCCCccc--eeeecCCeeeec
Q psy6572 451 FVNECNVSHGGQLCAH--ECI-------DLKIGYKCACRKGYQVHPEDKHLCV-DTNECLDRPCSH--YCRNTLGSYSCS 518 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~-------nt~~gy~C~C~~Gy~L~p~d~~tC~-didEC~~~~Csq--~C~nt~gsy~C~ 518 (1416)
.+++|...+ |.+ .|+ +++++|+|.|++||. +..|+ +++||+..+|.. +|+++.++|+|.
T Consensus 51 ~~~~C~~~~----C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~-----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~ 121 (143)
T 4d90_A 51 SAGPCTPNP----CHNGGTCEISEAYRGDTFIGYVCKCPRGFN-----GIHCQHNINECEVEPCKNGGICTDLVANYSCE 121 (143)
T ss_dssp CCCTTSSCC----CCTTCEEEECCCEETTEECCEEEECCTTEE-----STTSCEECCTTTTCCSCTTCEEEEETTEEEEE
T ss_pred cCCcCCCCC----CCCCCEecCCCccccCCCCCeEeECcCCCc-----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeE
Confidence 566775432 543 688 778899999999994 56897 999999778864 899999999999
Q ss_pred CCCCcEEecCCCceEec
Q psy6572 519 CAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 519 C~~Gy~L~~dg~sC~a~ 535 (1416)
|++||+ |+.|...
T Consensus 122 C~~G~~----G~~c~~~ 134 (143)
T 4d90_A 122 CPGEFM----GRNCQYK 134 (143)
T ss_dssp CCTTCB----STTSCBC
T ss_pred CCCCCc----cCCceec
Confidence 999997 4455443
No 193
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.00 E-value=0.00074 Score=77.46 Aligned_cols=150 Identities=11% Similarity=-0.035 Sum_probs=97.3
Q ss_pred eeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cC--CCceEEEEccCCcEEEeeCCCCeEEEeecCCCceE-E
Q psy6572 571 GLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-AT--SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRK-V 645 (1416)
Q Consensus 571 ~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~--~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~-v 645 (1416)
|+++. .++.+|++.... ..|+++++.+. ....+. .. .|.++++.+.++.||++....+.|.+.++.+.... .
T Consensus 4 g~~~~-~~~~~~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYP--NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCC-TTCEEEEEEETT--TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccc-CCCEEEEEeCCC--CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 44553 356777777664 37888877632 221222 22 69999999988889999988899999998754433 3
Q ss_pred EEcCC-----CCCcceeeecCCcceEEEeeCC----------CCceEEEEecCCCC---CEEEeecCCCCCeeEEeecCC
Q psy6572 646 LINKG-----LQEPRGIALNPAYGYMYWTDWG----------QNAHIGKAKMDGSN---PKVIISKNLSWPNALTISYET 707 (1416)
Q Consensus 646 Li~~~-----l~~P~gIavDp~~g~LYWtD~g----------~~~~I~ra~mDGs~---r~vlv~~~l~~P~gLaiD~~~ 707 (1416)
+.... ...|.+|+++|...+||++... ....|...++.... ...... .-..+.+|++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG 159 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCC
Confidence 32222 3348999999999999998732 02478888876521 111222 22357788898654
Q ss_pred CeEEEecCCCCeEEEEeCCCC
Q psy6572 708 NELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
+||++. +.|..+++...
T Consensus 160 -~l~~~~---~~i~~~d~~~~ 176 (349)
T 1jmx_B 160 -SLYVAG---PDIYKMDVKTG 176 (349)
T ss_dssp -CEEEES---SSEEEECTTTC
T ss_pred -cEEEcc---CcEEEEeCCCC
Confidence 488864 34888887443
No 194
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.97 E-value=8.2e-06 Score=82.63 Aligned_cols=72 Identities=36% Similarity=0.989 Sum_probs=58.3
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccc-cCCcCCCCCccc--eeeecCCeeeecCCCCcEE
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCV-DTNECLDRPCSH--YCRNTLGSYSCSCAPGYAL 525 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~-didEC~~~~Csq--~C~nt~gsy~C~C~~Gy~L 525 (1416)
+|+||...... |.+ .|++++++|+|.|++||.. ..|. ++++|...+|.. .|+++.++|+|.|++||+
T Consensus 4 dideC~~~~~~--C~~~g~C~~~~g~~~C~C~~Gy~G-----~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~- 75 (135)
T 2vj3_A 4 DVDECSLGANP--CEHAGKCINTLGSFECQCLQGYTG-----PRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYE- 75 (135)
T ss_dssp CCCTTTSSSCS--SSTTCEEEECSSSEEEECCTTEES-----TTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEE-
T ss_pred ccccccCCCCC--CCCCCEeECCCCCEEEECCCCCcC-----CcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCc-
Confidence 46788644434 876 7999999999999999963 4674 899998778864 899999999999999997
Q ss_pred ecCCCceE
Q psy6572 526 LSDKHGCK 533 (1416)
Q Consensus 526 ~~dg~sC~ 533 (1416)
|..|.
T Consensus 76 ---G~~C~ 80 (135)
T 2vj3_A 76 ---GVHCE 80 (135)
T ss_dssp ---SSSSC
T ss_pred ---CCcce
Confidence 44564
No 195
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.97 E-value=8.6e-06 Score=101.62 Aligned_cols=68 Identities=28% Similarity=0.659 Sum_probs=56.1
Q ss_pred cccccCCCCCCcccc--cceecCCc-eEE-eeCCCceecCCCCCccccCCcCCCC--Cccc-----eeeecCCeeeec-C
Q psy6572 452 VNECNVSHGGQLCAH--ECIDLKIG-YKC-ACRKGYQVHPEDKHLCVDTNECLDR--PCSH-----YCRNTLGSYSCS-C 519 (1416)
Q Consensus 452 i~eC~~~~~~~~Cs~--~C~nt~~g-y~C-~C~~Gy~L~p~d~~tC~didEC~~~--~Csq-----~C~nt~gsy~C~-C 519 (1416)
|+||...+ |.+ .|++++++ |+| .|++||. .++++|++++||+.. .|.+ .|+|+.++|+|. |
T Consensus 3 IDeC~~nP----C~~gg~C~n~~~Gsy~C~~C~~Gyt---Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C 75 (634)
T 1yo8_A 3 PDGCLSNP----CFPGAQCSSFPDGSWSCGFCPVGFL---GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPC 75 (634)
T ss_dssp -CGGGGCC----SCTTCCEEECTTSCEEECCCCTTBC---SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCC
T ss_pred ccccCCCC----CCCCCEEecCCCCCeECCcCCCccC---CCCCCccccccccCCCCcccCCccccceeeccCceecccC
Confidence 67775433 765 79999966 999 9999996 567899999999844 4987 899999999999 9
Q ss_pred CCCcEEe
Q psy6572 520 APGYALL 526 (1416)
Q Consensus 520 ~~Gy~L~ 526 (1416)
++||+..
T Consensus 76 ~~Gy~G~ 82 (634)
T 1yo8_A 76 PPRYRGN 82 (634)
T ss_dssp CTTEEEC
T ss_pred CCCcccC
Confidence 9999854
No 196
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.95 E-value=0.0012 Score=73.04 Aligned_cols=215 Identities=9% Similarity=0.016 Sum_probs=133.1
Q ss_pred EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEEee---cCCCceEEEEccCC
Q psy6572 548 YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELLFP---ATSPDGLTVDWVGR 621 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l~~---l~~p~gLAvD~~~~ 621 (1416)
..|+.+++.+.. ..+......+.+++|.+.++.|++... ..|+++.+.+ .. ..+.. ...+..+++.+.+.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSE----GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEET----TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred eeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcC----CeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 345666665544 333334456788999998888887642 3788888775 33 33332 24567899999888
Q ss_pred cEEEeeCC---CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeC-CCCceEEEEecCCCCCEEEeecCCCC
Q psy6572 622 NLYWCDKG---LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKMDGSNPKVIISKNLSW 697 (1416)
Q Consensus 622 ~LYwtD~~---~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~mDGs~r~vlv~~~l~~ 697 (1416)
.|+++... ..+|.+.++.+...+.+.. ...+..+++.|...+|+++.. ....+|+.+++++...+.+ ......
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~ 174 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGTPRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL-THGEGR 174 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCCCEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC-CCSSSC
T ss_pred EEEEEEeCCCCcceEEEEECCCCceEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc-ccCCCc
Confidence 89888743 4688888887766555432 234788899999888886542 2334677777776544333 333456
Q ss_pred CeeEEeecCCCeEEEecC--CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecC----------
Q psy6572 698 PNALTISYETNELFWGDA--HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWE---------- 763 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~--~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~---------- 763 (1416)
+..+++.+....|+++-. ....|+.+++++...+.+... ......+++. +.+|+++...
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS-------AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC-------SEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC-------CcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 688999887777887643 445777777777655544321 1223445553 3456655442
Q ss_pred CCeeEEecccCCC
Q psy6572 764 MKSIERCDKYTGK 776 (1416)
Q Consensus 764 ~~~I~~~nk~tG~ 776 (1416)
...|+..+..++.
T Consensus 248 ~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 248 DVRVQLMDMDGGN 260 (297)
T ss_dssp EEEEEEEETTSCS
T ss_pred ceEEEEEecCCCC
Confidence 2446666554444
No 197
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.93 E-value=0.00048 Score=80.13 Aligned_cols=174 Identities=17% Similarity=0.148 Sum_probs=108.8
Q ss_pred EEEEEEecCCcc-eEEecccccceeeeeecC----CC---eEEEeecc--CCCccEEEEecC---CCCeEE-------ee
Q psy6572 548 YYIREVTQAGVM-TIRIHNQTNAVGLDFDWV----DN---CLYWSDVT--MHGSSIRRSCNN---SQPELL-------FP 607 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~----~~---~LYwtD~~--~~~~~I~r~~l~---s~~~~l-------~~ 607 (1416)
..|..++++|.. ..+.. ..+.+|++-+. ++ .+|.++.. .+ +|..+.++ ...+.+ ..
T Consensus 50 ~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n--~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKN--TIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCC--EEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCC--eEEEEEECCCCCceeeccccccCcCC
Confidence 367778887776 22221 33444443321 11 46777766 54 66666554 222222 12
Q ss_pred -cCCCceEEE--EccCCc--EEEeeCCCCeEEEeec----CCCceEEEEc--CCCCCcceeeecCCcceEEEeeCCCCce
Q psy6572 608 -ATSPDGLTV--DWVGRN--LYWCDKGLDTIEVAKL----DGRFRKVLIN--KGLQEPRGIALNPAYGYMYWTDWGQNAH 676 (1416)
Q Consensus 608 -l~~p~gLAv--D~~~~~--LYwtD~~~~~I~v~~l----dG~~~~vLi~--~~l~~P~gIavDp~~g~LYWtD~g~~~~ 676 (1416)
+..|.||++ ++.++. +|+++.. ++++...| +|.....++. .--..|.|+++|+..|+||++++. ..
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd--~G 202 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED--EA 202 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT--TE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc--ce
Confidence 578999999 887774 6767665 67766555 2323222222 223579999999999999999976 35
Q ss_pred EEEEecCCC--C-CEEEee---cCCC-CCeeEEeecCC---CeEEEecCCCCeEEEEeCCCC
Q psy6572 677 IGKAKMDGS--N-PKVIIS---KNLS-WPNALTISYET---NELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 677 I~ra~mDGs--~-r~vlv~---~~l~-~P~gLaiD~~~---~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
|++++.+.. . ++++.. ..|. .|.||+|.+.. ++||.++.+.+....++..++
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 999996633 2 344432 2343 78999997543 579999988888777777654
No 198
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.92 E-value=6e-06 Score=68.74 Aligned_cols=37 Identities=35% Similarity=0.830 Sum_probs=34.4
Q ss_pred CCCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 501 DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 501 ~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
+++|+|+|+|++|+|+|.|++||+|..|+++|+.++.
T Consensus 5 ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 5 NGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp TTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSS
T ss_pred CCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCc
Confidence 4789999999999999999999999999999998764
No 199
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.92 E-value=0.00032 Score=83.10 Aligned_cols=100 Identities=12% Similarity=-0.044 Sum_probs=67.0
Q ss_pred CCeEEEeeccCCC-c-cEEEEecCCCCeEEee---cCCCceEEEEccCCcEEEeeC---------CCCeEEEeecCCCc-
Q psy6572 578 DNCLYWSDVTMHG-S-SIRRSCNNSQPELLFP---ATSPDGLTVDWVGRNLYWCDK---------GLDTIEVAKLDGRF- 642 (1416)
Q Consensus 578 ~~~LYwtD~~~~~-~-~I~r~~l~s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~---------~~~~I~v~~ldG~~- 642 (1416)
..++|+++...+. . .|..+++.+ .+++.. ...| +|++.+.++.||+++. ..+.|.++++....
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t-~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGC-GVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTT-TEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCeEEEECCccCCccceEEEEECCC-CeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 4568888775320 1 455665552 233322 5568 9999999999999984 35689999987544
Q ss_pred eEEEEcC------CCCCcceeeecCCcceEEEeeCCCCceEEE
Q psy6572 643 RKVLINK------GLQEPRGIALNPAYGYMYWTDWGQNAHIGK 679 (1416)
Q Consensus 643 ~~vLi~~------~l~~P~gIavDp~~g~LYWtD~g~~~~I~r 679 (1416)
...|... ....|++|+++|..++||+++++....|.+
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEE
Confidence 3333222 135799999999999999998753334444
No 200
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.92 E-value=3.5e-06 Score=72.38 Aligned_cols=38 Identities=26% Similarity=0.826 Sum_probs=34.7
Q ss_pred CC-CCCCCccceeecCCCCccccCCCCeeecCCCceecc
Q psy6572 808 CE-NNGGCQGLCLLKPNGHRQCACPDNFILESDGKTCRH 845 (1416)
Q Consensus 808 C~-~NggCshlCl~~p~~~~~C~Cp~g~~L~~d~~tC~~ 845 (1416)
|+ +||+|+|+|+.++.++|+|+|+.||.|..|+++|..
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 55 689999999999877999999999999999999985
No 201
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.91 E-value=0.00024 Score=83.94 Aligned_cols=163 Identities=10% Similarity=0.135 Sum_probs=106.4
Q ss_pred EEEEEEecCCcceEEecccccceeeeee-cC------CCeEEEeeccCCCccEEEEecC--CCCeEEee-----------
Q psy6572 548 YYIREVTQAGVMTIRIHNQTNAVGLDFD-WV------DNCLYWSDVTMHGSSIRRSCNN--SQPELLFP----------- 607 (1416)
Q Consensus 548 ~~I~~i~l~g~~~~~~~~l~~~~~l~~D-~~------~~~LYwtD~~~~~~~I~r~~l~--s~~~~l~~----------- 607 (1416)
..|+++.+..... ........|++| .. ...+|++|.... .|.++++. ..++++..
T Consensus 136 ~li~~y~~p~~~~---~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~--gLIVydl~~~~swRv~~~~~~pd~~~~~~ 210 (381)
T 3q6k_A 136 PEVVRYYFPTRLV---EKPTYFGGFAVDVANPKGDCSETFVYITNFLRG--ALFIYDHKKQDSWNVTHPTFKAERPTKFD 210 (381)
T ss_dssp CEEEEEECCGGGC---CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTT--EEEEEETTTTEEEEEECGGGSCCSCEEEE
T ss_pred eeEEEEECCHHhc---ccCCccceEEEecccCCCCCCccEEEEEcCCCC--cEEEEECCCCcEEEEccCCCccccCcceE
Confidence 4566666643320 111234556666 21 578899998643 56666655 11122210
Q ss_pred --------cCCCceEEEEcc----CCcEEEeeCCCCeEEEeec---C-C---CceEEEEcCC-CCCcceeeecCCcceEE
Q psy6572 608 --------ATSPDGLTVDWV----GRNLYWCDKGLDTIEVAKL---D-G---RFRKVLINKG-LQEPRGIALNPAYGYMY 667 (1416)
Q Consensus 608 --------l~~p~gLAvD~~----~~~LYwtD~~~~~I~v~~l---d-G---~~~~vLi~~~-l~~P~gIavDp~~g~LY 667 (1416)
.....|||+.+. ++.|||.-....+++++.. . . ...+.+-..+ .....++|+|+.+|.||
T Consensus 211 i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly 290 (381)
T 3q6k_A 211 YGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIF 290 (381)
T ss_dssp ETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEE
T ss_pred ECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEE
Confidence 246789999988 8899999988888888762 2 2 2233333332 24455789998999999
Q ss_pred EeeCCCCceEEEEecCC-----CCCEEEee-cCCCCCeeEEeecCCCeEEEecCCC
Q psy6572 668 WTDWGQNAHIGKAKMDG-----SNPKVIIS-KNLSWPNALTISYETNELFWGDAHE 717 (1416)
Q Consensus 668 WtD~g~~~~I~ra~mDG-----s~r~vlv~-~~l~~P~gLaiD~~~~rLYWtD~~~ 717 (1416)
+++...+ .|.+.+.++ .+..+|+. ..|.||.+|+||. ++.||++....
T Consensus 291 ~~~~~~~-aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn~l 344 (381)
T 3q6k_A 291 FAEANTK-QVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSNGF 344 (381)
T ss_dssp EEESSSS-EEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEECSC
T ss_pred EEeccCC-eEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEECcc
Confidence 9997655 899998887 23455554 5699999999985 77899876443
No 202
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.90 E-value=0.00057 Score=79.54 Aligned_cols=146 Identities=17% Similarity=0.184 Sum_probs=96.7
Q ss_pred cEEEeeCC--CCeEEEeecCCCc--eEEE------EcCCCCCcceeee--cCCcc--eEEEeeCCCCceEEEEec----C
Q psy6572 622 NLYWCDKG--LDTIEVAKLDGRF--RKVL------INKGLQEPRGIAL--NPAYG--YMYWTDWGQNAHIGKAKM----D 683 (1416)
Q Consensus 622 ~LYwtD~~--~~~I~v~~ldG~~--~~vL------i~~~l~~P~gIav--Dp~~g--~LYWtD~g~~~~I~ra~m----D 683 (1416)
.+|.++.. .++|.++.++... .+.+ +...+..|.||++ +|..+ ++|+++.. .+|+...+ +
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~ 165 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKN 165 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTT
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCC
Confidence 46889988 8999999886333 2223 1245688999999 98877 57777643 46666444 2
Q ss_pred CCCCEEEeec--CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC--CC-ceEEEEeccCCCCcccccceeEEEe-c---
Q psy6572 684 GSNPKVIISK--NLSWPNALTISYETNELFWGDAHEDYIAVSDLN--GE-NIKIIVSRRMDPTINLHHVFALAVF-E--- 754 (1416)
Q Consensus 684 Gs~r~vlv~~--~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld--G~-~r~~v~~~~~~p~~~l~~P~~lav~-~--- 754 (1416)
|.....++.+ .-..|.|+++|...++||+++...+ |++++.+ +. .+++|.... .......|-||+++ .
T Consensus 166 g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~--~g~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 166 GYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRAD--GRHLTRDIEGLTIYYAADG 242 (355)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBS--SSSBCSCEEEEEEEECGGG
T ss_pred CcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEec--CCccccCcceEEEEecCCC
Confidence 3222233321 2356899999999999999998854 9999954 32 234443221 01123378999996 2
Q ss_pred -CcEEEeecCCCeeEEecc
Q psy6572 755 -DHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 755 -d~LYwtD~~~~~I~~~nk 772 (1416)
++||.++.+++++..++.
T Consensus 243 ~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp CEEEEEEEGGGTEEEEEES
T ss_pred CEEEEEEcCCCCEEEEEEC
Confidence 489999988888776665
No 203
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.89 E-value=0.00076 Score=74.75 Aligned_cols=201 Identities=14% Similarity=0.100 Sum_probs=128.3
Q ss_pred eEecCCCCCeEEEEecEEEEEEecCC-cc-eEEeccc--ccceeeeeecCCCeEEEeeccC-CCccEEEEecC-CCCeEE
Q psy6572 532 CKATSDVPPNLLFTNKYYIREVTQAG-VM-TIRIHNQ--TNAVGLDFDWVDNCLYWSDVTM-HGSSIRRSCNN-SQPELL 605 (1416)
Q Consensus 532 C~a~~~~~~~li~s~~~~I~~i~l~g-~~-~~~~~~l--~~~~~l~~D~~~~~LYwtD~~~-~~~~I~r~~l~-s~~~~l 605 (1416)
..+..+...+|+++....|+.+++.+ .. ..+.... ..+..++|.+.++.|+++.... ....|+.+.+. .....+
T Consensus 46 ~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 46 APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 34444445567777777888888877 55 3333222 4567789999888888887331 12478888776 444444
Q ss_pred eecCCCceEEEEccCCcEEEeeCCCC--eEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeC-CCCceEEEEec
Q psy6572 606 FPATSPDGLTVDWVGRNLYWCDKGLD--TIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKM 682 (1416)
Q Consensus 606 ~~l~~p~gLAvD~~~~~LYwtD~~~~--~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~m 682 (1416)
.....+..+++.+.++.|+++....+ +|+.+++.+.....+. .....+..+++.|...+|+++.. ....+|+.+++
T Consensus 126 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 126 TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred ecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 33444667788888888887765555 5566666655544433 34456789999999888887753 33457888887
Q ss_pred CCCCCEEEeecCCCCCeeEEeecCCCeEEEecCC----------CCeEEEEeCCCCceEEEE
Q psy6572 683 DGSNPKVIISKNLSWPNALTISYETNELFWGDAH----------EDYIAVSDLNGENIKIIV 734 (1416)
Q Consensus 683 DGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~----------~~~I~~~~ldG~~r~~v~ 734 (1416)
++...+.+.. .......+++.+...+|+++... ...|+..++.+...+.+.
T Consensus 205 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 205 DGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp TSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 7765444332 22344567888777777776542 246888888766555444
No 204
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.89 E-value=6.2e-06 Score=102.23 Aligned_cols=89 Identities=27% Similarity=0.561 Sum_probs=61.5
Q ss_pred ceecCCcccCCCCCCCCC-CCccccccccCCCCCcCCCCCCcccC-CCceecCceeecCCCCCCCCCCCCCCCCCCCCCC
Q psy6572 125 ACIEESYICDGQNDCFDM-SDEQNCDQIKDVSPKMNCSGDKFLCR-NGNCILSRWRCDGDNDCNDGNDGLSSDEMNCDTE 202 (1416)
Q Consensus 125 ~CI~~~~~CDg~~DC~D~-sDE~~C~~~~~~~~~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~~~ 202 (1416)
|.|.......|. .|... .|+..|.....-.....|. ++|+|. +|+|||.+|+|||++||.|| |||.+|..
T Consensus 31 R~v~~p~q~gG~-~C~~~l~d~~~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~-----sDE~~C~~- 102 (554)
T 3ojy_A 31 RSLLQPNKFGGT-ICSGDIWDQASCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCNGDQDCLDG-----SDEDDCED- 102 (554)
T ss_dssp CCEEECBCSSCC-CCCSCSEEEEECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTSSSCCSSSC-----TTSSSCCS-
T ss_pred EeeccccccCCC-CCCCccccccCCCCCCCCcccCCCC-CcCccCCCCEEcccccccCCcccCCCc-----cccccCCC-
Confidence 567777777775 57754 6788885311101123464 799999 99999999999999999999 99999952
Q ss_pred CccCCCCCceecCCCCceecCccc
Q psy6572 203 STCKANNNVFQCDNNKTCISKSWV 226 (1416)
Q Consensus 203 ~~C~~~~~~F~C~~~~~CI~~~w~ 226 (1416)
... ..+.| .....||..|+
T Consensus 103 --~~~--~~~~C-~~~~~iPg~~l 121 (554)
T 3ojy_A 103 --VRA--IDEDC-SQYEPIPGSQK 121 (554)
T ss_dssp --CCC--CCTTT-TTSCBCTTHHH
T ss_pred --CCC--Ccccc-ccccccCcccc
Confidence 222 34567 44556665544
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.88 E-value=0.00077 Score=76.44 Aligned_cols=160 Identities=9% Similarity=0.002 Sum_probs=112.3
Q ss_pred CCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEE
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKV 689 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~v 689 (1416)
.+.++++.+. ++||++ ..+.|...+.+|+....+-......+.++++.+. |.+++++.+...+|..++.+|+....
T Consensus 38 ~~~~~~~~pd-G~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~d-G~~lv~~~~~~~~v~~vd~~Gk~l~~ 113 (276)
T 3no2_A 38 ECNSVAATKA-GEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQTARILPD-GNALVAWCGHPSTILEVNMKGEVLSK 113 (276)
T ss_dssp CCCEEEECTT-SCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTT-SCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred CCcCeEECCC-CCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccccEECCC-CCEEEEecCCCCEEEEEeCCCCEEEE
Confidence 5788888874 566664 4567888998887655554322223456677655 67777776534578888888876544
Q ss_pred Eee-cC----CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecC
Q psy6572 690 IIS-KN----LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWE 763 (1416)
Q Consensus 690 lv~-~~----l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~ 763 (1416)
+.. .. ..+|.+++++. ++.+++++...++|..++.+|+....+... ..|+++.+. ++.+++++..
T Consensus 114 ~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~--------~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 114 TEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLLNSVKLS--------GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp EEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECS--------SCCCEEEECTTSCEEEECBT
T ss_pred EeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEEEEEECC--------CCccceeEcCCCCEEEEeCC
Confidence 432 12 23577888875 777888998899999999998766555332 357777764 6789999998
Q ss_pred CCeeEEecccCCCceEEEE
Q psy6572 764 MKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 764 ~~~I~~~nk~tG~~~~~l~ 782 (1416)
.++|+.++..+|+.+-.+.
T Consensus 185 ~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 185 AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp TSEEEEECTTTCCEEEEEE
T ss_pred CCeEEEEeCcCCcEEEEec
Confidence 8899999988888766654
No 206
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.88 E-value=0.00065 Score=84.18 Aligned_cols=254 Identities=14% Similarity=0.098 Sum_probs=152.9
Q ss_pred CeEEEEe--cEEEEEEecCCcc---eEEecccccceeeee-e-cCCCeEEEeeccC---------------CCccEEEEe
Q psy6572 540 PNLLFTN--KYYIREVTQAGVM---TIRIHNQTNAVGLDF-D-WVDNCLYWSDVTM---------------HGSSIRRSC 597 (1416)
Q Consensus 540 ~~li~s~--~~~I~~i~l~g~~---~~~~~~l~~~~~l~~-D-~~~~~LYwtD~~~---------------~~~~I~r~~ 597 (1416)
.+||+.+ ...|.+|+++... .+.+.+...+.|+++ . +.+++||.+.... ....|.+++
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEE
Confidence 3566654 4468999998866 233444567899998 4 7899999884210 012444444
Q ss_pred cCCCCeEEee---cCCCceEEEEccCCcEEEeeCCC--------------CeEEEeec--------CCCc-----eEEEE
Q psy6572 598 NNSQPELLFP---ATSPDGLTVDWVGRNLYWCDKGL--------------DTIEVAKL--------DGRF-----RKVLI 647 (1416)
Q Consensus 598 l~s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~--------------~~I~v~~l--------dG~~-----~~vLi 647 (1416)
..+ .+++.. -.+|+++++++.++.+|+|.... ..|.|.+. +|+. ..||-
T Consensus 182 ~~t-~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID 260 (595)
T 1fwx_A 182 ADK-WEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD 260 (595)
T ss_dssp TTT-TEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred CCC-CeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEe
Confidence 442 344333 35899999999999999999765 22333321 1211 11111
Q ss_pred c------------CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC---------C-EEEeec-CCCCCeeEEee
Q psy6572 648 N------------KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN---------P-KVIISK-NLSWPNALTIS 704 (1416)
Q Consensus 648 ~------------~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~---------r-~vlv~~-~l~~P~gLaiD 704 (1416)
. ..-..|.||++.|...+||+++.+. ++|.+++++-.. + .++..- .-..|.++++|
T Consensus 261 ~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~ 339 (595)
T 1fwx_A 261 GRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD 339 (595)
T ss_dssp CSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEEC
T ss_pred CcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEEC
Confidence 1 1124799999999999999999765 478888777321 1 122221 23569999999
Q ss_pred cCCCeEEEecCCCCeEEEEeCCCC-------c-eEEEEecc--CCCCcccccceeEEE--ecCcEEEeecCC-Cee----
Q psy6572 705 YETNELFWGDAHEDYIAVSDLNGE-------N-IKIIVSRR--MDPTINLHHVFALAV--FEDHLFWTDWEM-KSI---- 767 (1416)
Q Consensus 705 ~~~~rLYWtD~~~~~I~~~~ldG~-------~-r~~v~~~~--~~p~~~l~~P~~lav--~~d~LYwtD~~~-~~I---- 767 (1416)
... ++|.+-...+.|...+++.. . .++|..-. .+|+. +..++++++ .+.+||.++..+ .++
T Consensus 340 ~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh-~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~g 417 (595)
T 1fwx_A 340 GRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGH-LKTVMGETLDATNDWLVCLSKFSKDRFLNVG 417 (595)
T ss_dssp TTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEE-EEETTTTSTTCCSSEEEEEESCCTTSSCCCC
T ss_pred CCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccc-ceeccceEeCCCCCEEEEcCCCCccccccCC
Confidence 855 99999999999999997651 1 23332211 01100 112244444 467899988876 444
Q ss_pred -------EEecccCCCceEEEE-eCCCCCCeeeeeeccc
Q psy6572 768 -------ERCDKYTGKNCTSVV-KNLVHKPMDLRVYHPY 798 (1416)
Q Consensus 768 -------~~~nk~tG~~~~~l~-~~~~~~p~~I~v~h~~ 798 (1416)
..++. +|...+++. ......|..+.+.+..
T Consensus 418 p~~~~~~ql~di-s~~~m~lv~d~p~~~ePh~~~i~~~~ 455 (595)
T 1fwx_A 418 PLKPENDQLIDI-SGDKMVLVHDGPTFAEPHDAIAVHPS 455 (595)
T ss_dssp SSCCEEEEEEEC-SSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred CCCCCcceEEEc-CCCcEEEEEEEcCCCCCCceEEccHH
Confidence 34443 444444333 1235677777777643
No 207
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.82 E-value=1.1e-05 Score=67.61 Aligned_cols=37 Identities=38% Similarity=0.932 Sum_probs=34.2
Q ss_pred CCCccceeeecCC-eeeecCCCCcEEecCCCceEecCC
Q psy6572 501 DRPCSHYCRNTLG-SYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 501 ~~~Csq~C~nt~g-sy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
++.|+|+|+|++| +|+|.|++||+|..|+++|+.++.
T Consensus 6 nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 6 NGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp GGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcc
Confidence 4789999999999 899999999999999999998764
No 208
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.77 E-value=0.0013 Score=78.99 Aligned_cols=182 Identities=9% Similarity=-0.009 Sum_probs=122.9
Q ss_pred EEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-cCCCceEEEEccCCcEEE
Q psy6572 549 YIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWVGRNLYW 625 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~~~~LYw 625 (1416)
.|+..++.+.. ..+......+.+++|.+.+++|+++........|+.+.+. .....+.. ...+..+++.+.++.|++
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp EEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEE
Confidence 67778876655 3333334456789999999989877554323468888887 33333333 344567888888888888
Q ss_pred eeCC--CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCC-CceEEEEecCCCCCEEEeecCCCCCeeEE
Q psy6572 626 CDKG--LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ-NAHIGKAKMDGSNPKVIISKNLSWPNALT 702 (1416)
Q Consensus 626 tD~~--~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~-~~~I~ra~mDGs~r~vlv~~~l~~P~gLa 702 (1416)
+... ..+|++.++++...+.+. ........+++.|...+|+++.... ...|...++++...+.|... .....++
T Consensus 284 ~s~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~ 360 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST--FLDETPS 360 (415)
T ss_dssp EECTTSSCEEEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS--SSCEEEE
T ss_pred EECCCCCcEEEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC--CCcCCeE
Confidence 7643 348999998876554443 2334567899999988898876432 35789999887665444332 2677888
Q ss_pred eecCCCeEEEecCCCC--eEEEEeCCCCceEEE
Q psy6572 703 ISYETNELFWGDAHED--YIAVSDLNGENIKII 733 (1416)
Q Consensus 703 iD~~~~rLYWtD~~~~--~I~~~~ldG~~r~~v 733 (1416)
+.+....|+++....+ .|+.++++|...+.|
T Consensus 361 ~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred EcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 8877777777754433 788888887766554
No 209
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.74 E-value=0.001 Score=79.92 Aligned_cols=199 Identities=11% Similarity=-0.021 Sum_probs=125.5
Q ss_pred eeeee--cCCCeEEEeeccCCCccEEEEecCC---CCeEEee-----------cCCCceEEEEccCCcEEEeeCCC----
Q psy6572 571 GLDFD--WVDNCLYWSDVTMHGSSIRRSCNNS---QPELLFP-----------ATSPDGLTVDWVGRNLYWCDKGL---- 630 (1416)
Q Consensus 571 ~l~~D--~~~~~LYwtD~~~~~~~I~r~~l~s---~~~~l~~-----------l~~p~gLAvD~~~~~LYwtD~~~---- 630 (1416)
++++. ...++||+...... +|+.+.+.+ ..+++.. +..|.++++-+.+ ||++..+.
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~--~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSS--RIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGE 161 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTC--CEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSC
T ss_pred ccccCCCccCCEEEEccCCCC--eEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCC
Confidence 44445 66888999888854 899988752 2222211 3478888887655 99987665
Q ss_pred --CeEEEeecCCCc-eEEEEcCCC--CCcceeeecCCcceEEEeeCC-----------------CCceEEEEecCCCCCE
Q psy6572 631 --DTIEVAKLDGRF-RKVLINKGL--QEPRGIALNPAYGYMYWTDWG-----------------QNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 631 --~~I~v~~ldG~~-~~vLi~~~l--~~P~gIavDp~~g~LYWtD~g-----------------~~~~I~ra~mDGs~r~ 688 (1416)
+.|.+++..+.. ...+..... ..+..+.+.|..+.||.++|+ ...+|...+++.. +
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--k 239 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--K 239 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--E
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--c
Confidence 688888877443 333321111 123345568888999999987 2357888888753 3
Q ss_pred EEeecCC----CCCeeEEe--ecCCCeEEEecC-----CCCeEEEEeCCCCceEEEEe--ccCCCCc-c-----------
Q psy6572 689 VIISKNL----SWPNALTI--SYETNELFWGDA-----HEDYIAVSDLNGENIKIIVS--RRMDPTI-N----------- 743 (1416)
Q Consensus 689 vlv~~~l----~~P~gLai--D~~~~rLYWtD~-----~~~~I~~~~ldG~~r~~v~~--~~~~p~~-~----------- 743 (1416)
++..-.+ ..|..|++ ++...++|++.. ..+.|....+++...+.+.. ....+.. .
T Consensus 240 ~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~ 319 (462)
T 2ece_A 240 RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAV 319 (462)
T ss_dssp EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEE
T ss_pred EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccC
Confidence 3333223 35777766 888889999988 77888887776532221111 0000000 0
Q ss_pred cccceeEEE--ecCcEEEeecCCCeeEEecccCC
Q psy6572 744 LHHVFALAV--FEDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 744 l~~P~~lav--~~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
-..|.+|.+ .+.+||+++|..+.|..++..+.
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 134777777 46689999999999888765433
No 210
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.73 E-value=0.0013 Score=83.60 Aligned_cols=227 Identities=9% Similarity=-0.026 Sum_probs=134.2
Q ss_pred EEEEe--cEEEEEEecC--C-cc-eEEec-----ccccceeeeeecCCCeEEEeecc-------CCCccEEEEecCC---
Q psy6572 542 LLFTN--KYYIREVTQA--G-VM-TIRIH-----NQTNAVGLDFDWVDNCLYWSDVT-------MHGSSIRRSCNNS--- 600 (1416)
Q Consensus 542 li~s~--~~~I~~i~l~--g-~~-~~~~~-----~l~~~~~l~~D~~~~~LYwtD~~-------~~~~~I~r~~l~s--- 600 (1416)
|+|+. ...|+.++++ | .. ..+.. ....+.+++|.+.++.|+++... .....|+++.+++
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 55554 3568888877 3 33 33322 23356788999999999887643 1113688888775
Q ss_pred ---C-CeEEe-e-cCCCceEEEEccCCcEEEeeCCC-------CeEEEeecCC-C---ceEEEEcCCCCCcceeeecCCc
Q psy6572 601 ---Q-PELLF-P-ATSPDGLTVDWVGRNLYWCDKGL-------DTIEVAKLDG-R---FRKVLINKGLQEPRGIALNPAY 663 (1416)
Q Consensus 601 ---~-~~~l~-~-l~~p~gLAvD~~~~~LYwtD~~~-------~~I~v~~ldG-~---~~~vLi~~~l~~P~gIavDp~~ 663 (1416)
. .+.|. . .....++++.+-++.|+|+.... ..|.+.++++ . ..+.|.......+..++..|..
T Consensus 174 ~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 174 ADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp TCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred ccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 2 33343 3 33456678999899999887543 4799999984 3 3334443334567889998886
Q ss_pred ceEEEeeCCCCceEEEEecCCCCCEEEeecC--CCC------CeeEEeecCCCeEEEecC-CCCeEEEEeCCCCceEEEE
Q psy6572 664 GYMYWTDWGQNAHIGKAKMDGSNPKVIISKN--LSW------PNALTISYETNELFWGDA-HEDYIAVSDLNGENIKIIV 734 (1416)
Q Consensus 664 g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~--l~~------P~gLaiD~~~~rLYWtD~-~~~~I~~~~ldG~~r~~v~ 734 (1416)
.++|.++.....+|++.++++...+.|+... +.. ...+++.. +++||++-. ...+|+.+++++...+.|.
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBSSSCEEEEEETTTTEEEECC
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEcCccEEEEEECCCCcEEEec
Confidence 6555555443458999988665544444322 111 24566643 455555533 4457888888876655442
Q ss_pred eccCCCCcccccceeE-EEecCcEEEeecCC---CeeEEecccCCC
Q psy6572 735 SRRMDPTINLHHVFAL-AVFEDHLFWTDWEM---KSIERCDKYTGK 776 (1416)
Q Consensus 735 ~~~~~p~~~l~~P~~l-av~~d~LYwtD~~~---~~I~~~nk~tG~ 776 (1416)
.. .....++ +..++.++++-... ..|+.++..+|.
T Consensus 333 ~~-------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 333 GP-------WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SS-------CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CC-------CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 21 1223344 55666666554332 256666654444
No 211
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.72 E-value=2.3e-05 Score=73.67 Aligned_cols=67 Identities=19% Similarity=0.553 Sum_probs=53.2
Q ss_pred CCcccccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccc--cCCcCCCCCccc--eeeecC--CeeeecCCC
Q psy6572 448 FSCFVNECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCV--DTNECLDRPCSH--YCRNTL--GSYSCSCAP 521 (1416)
Q Consensus 448 ~~C~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~--didEC~~~~Csq--~C~nt~--gsy~C~C~~ 521 (1416)
..|++++|.. ..|++..++|+|.|++||. .|+ ++++|...+|.+ +|+++. ++|+|.|++
T Consensus 13 ~~c~~~~c~~--------~pC~n~~~~y~C~C~~G~~-------~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~ 77 (91)
T 1tpg_A 13 MIYQQHQSWL--------RPVLRSNRVEYCWCNSGRA-------QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPE 77 (91)
T ss_dssp CBCCSSCEEE--------EECSSSSCEEEEECSSSCC-------BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCT
T ss_pred CeECCCcccC--------CccccCCCCcEeECCCCCc-------ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCC
Confidence 3455666632 2467788999999999994 575 789998888976 799988 899999999
Q ss_pred CcEEecCCCceE
Q psy6572 522 GYALLSDKHGCK 533 (1416)
Q Consensus 522 Gy~L~~dg~sC~ 533 (1416)
||. |+.|.
T Consensus 78 G~~----G~~Ce 85 (91)
T 1tpg_A 78 GFA----GKSCE 85 (91)
T ss_dssp TCB----SSSCC
T ss_pred CCc----CCcCC
Confidence 996 66775
No 212
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.69 E-value=3.1e-05 Score=79.05 Aligned_cols=59 Identities=37% Similarity=0.897 Sum_probs=47.6
Q ss_pred cceecCCceEEeeCCCceecC----CCCCccccCCcCCC---CCcc--ceeeecCCeeeecCCCCcEEecC
Q psy6572 467 ECIDLKIGYKCACRKGYQVHP----EDKHLCVDTNECLD---RPCS--HYCRNTLGSYSCSCAPGYALLSD 528 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p----~d~~tC~didEC~~---~~Cs--q~C~nt~gsy~C~C~~Gy~L~~d 528 (1416)
.|+++ |+|.|++||.... .++++|++++||+. .+|. ..|+|+.++|+|.|++||++...
T Consensus 14 ~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 14 SCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp EESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred EEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 45543 8999999998631 34578999999984 3897 59999999999999999998754
No 213
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.65 E-value=0.0005 Score=85.22 Aligned_cols=187 Identities=10% Similarity=0.087 Sum_probs=123.8
Q ss_pred CCCeEEEeeccCCCccEEEEecCCC-CeEEee---cCCCceEEE-E-ccCCcEEEee-----------------CCCCeE
Q psy6572 577 VDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP---ATSPDGLTV-D-WVGRNLYWCD-----------------KGLDTI 633 (1416)
Q Consensus 577 ~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~---l~~p~gLAv-D-~~~~~LYwtD-----------------~~~~~I 633 (1416)
.+++||+.+..+. +|.|+++.+. ..-++. ...|.||++ . +.++.||.+. ...+.|
T Consensus 100 DG~~lfVnd~~~~--rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANT--RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTT--EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCC--EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 5678999998854 8999999832 222223 567999998 4 8999999994 233477
Q ss_pred EEeecCCCceE-EEEcCCCCCcceeeecCCcceEEEeeCCCC-------------ceEEE--------------------
Q psy6572 634 EVAKLDGRFRK-VLINKGLQEPRGIALNPAYGYMYWTDWGQN-------------AHIGK-------------------- 679 (1416)
Q Consensus 634 ~v~~ldG~~~~-vLi~~~l~~P~gIavDp~~g~LYWtD~g~~-------------~~I~r-------------------- 679 (1416)
.+++.+..... .|...+ .|.+++++|..+++|+|..... ..|.+
T Consensus 178 tvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 77777643321 222123 7999999999999999985531 11111
Q ss_pred -EecCCCC--CEE---EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCc---------e-EEEEeccCCCCcc
Q psy6572 680 -AKMDGSN--PKV---IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGEN---------I-KIIVSRRMDPTIN 743 (1416)
Q Consensus 680 -a~mDGs~--r~v---lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~---------r-~~v~~~~~~p~~~ 743 (1416)
.-+|+.. .++ .+.. -..|.|+++.+..++||+++...++|..+++.... + .++..-. .
T Consensus 256 V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-----v 329 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-----L 329 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-----C
T ss_pred EEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-----C
Confidence 1112221 111 1111 14699999999999999999999999999987321 0 1122111 1
Q ss_pred cccceeEEEe-cCcEEEeecCCCeeEEeccc
Q psy6572 744 LHHVFALAVF-EDHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 744 l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~ 773 (1416)
-..|..+++. .+++|.+.+-...|.+.+..
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 2469999985 35999999999988877643
No 214
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.63 E-value=3.5e-05 Score=64.47 Aligned_cols=31 Identities=45% Similarity=1.104 Sum_probs=28.5
Q ss_pred ccccceecCCceEEeeCCCceecCCCCCcccc
Q psy6572 464 CAHECIDLKIGYKCACRKGYQVHPEDKHLCVD 495 (1416)
Q Consensus 464 Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d 495 (1416)
|+|.|+|++++|+|.|++||.|. .++++|++
T Consensus 22 C~~~C~n~~Gsy~C~C~~Gy~~~-~d~~~C~~ 52 (53)
T 1apq_A 22 CQHLCHNYVGGYFCSCRPGYELQ-EDRHSCQA 52 (53)
T ss_dssp TSSEEEEETTEEEEECSTTCEEC-TTSSCEEC
T ss_pred CCCEeECCCCCeEEECCCCCeEC-CCCCccCC
Confidence 99999999999999999999998 78888864
No 215
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.59 E-value=0.0021 Score=75.16 Aligned_cols=223 Identities=9% Similarity=-0.031 Sum_probs=126.0
Q ss_pred EEEEEecCCcc-eEEecccccc-eeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCCC----ceEEEEccCC
Q psy6572 549 YIREVTQAGVM-TIRIHNQTNA-VGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATSP----DGLTVDWVGR 621 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l~~~-~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~p----~gLAvD~~~~ 621 (1416)
.|+.+++.+.. ..+..+.... .++++.+.+++|+++... ..|+++.+. .....+..+... ...++++.+.
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence 47778877665 3333333323 367888999999998754 378888888 343334332211 1122344444
Q ss_pred cEEEe---------------------eCCCCeEEEeecCCCceEEEEcCCCCCcceeeecC-CcceEEEeeCCC----Cc
Q psy6572 622 NLYWC---------------------DKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNP-AYGYMYWTDWGQ----NA 675 (1416)
Q Consensus 622 ~LYwt---------------------D~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp-~~g~LYWtD~g~----~~ 675 (1416)
.|+.. ......|.+.++.+...+.|.. .......+++.| ..++|+++..+. ..
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~ 216 (388)
T 3pe7_A 138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDA 216 (388)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSC
T ss_pred eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CCccccccEECCCCCCEEEEEEecCCCCCcc
Confidence 44322 1123578899988766655553 334567899999 767776654332 34
Q ss_pred eEEEEecCCCCCEEEeecCC-CCCeeEEeecCCCeEEEecCC-CC---eEEEEeCCCCceEEEEeccCCCCcccccc--e
Q psy6572 676 HIGKAKMDGSNPKVIISKNL-SWPNALTISYETNELFWGDAH-ED---YIAVSDLNGENIKIIVSRRMDPTINLHHV--F 748 (1416)
Q Consensus 676 ~I~ra~mDGs~r~vlv~~~l-~~P~gLaiD~~~~rLYWtD~~-~~---~I~~~~ldG~~r~~v~~~~~~p~~~l~~P--~ 748 (1416)
+|+.++++|...+.|..... .....+++.+...+|+++... .. .|+.+++.+..++.|..... .......+ .
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~~~~~ 295 (388)
T 3pe7_A 217 RMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA-CSHLMSNYDGS 295 (388)
T ss_dssp SEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC-EEEEEECTTSS
T ss_pred eEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC-ceeeeecCCCC
Confidence 89999999887776654332 123456787767778665332 22 39999998777666654320 00000012 2
Q ss_pred eEEEecCcEEEee--------cCCCeeEEecccCCC
Q psy6572 749 ALAVFEDHLFWTD--------WEMKSIERCDKYTGK 776 (1416)
Q Consensus 749 ~lav~~d~LYwtD--------~~~~~I~~~nk~tG~ 776 (1416)
.++-.+.+|+++- .....|+.++..+|.
T Consensus 296 ~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 296 LMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred eEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 3444556666543 344567777755544
No 216
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.43 E-value=0.13 Score=57.96 Aligned_cols=233 Identities=9% Similarity=-0.062 Sum_probs=137.9
Q ss_pred ceEecCCCCCeEEEEecEEEEEEecCCcc-----eEEe--cccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC
Q psy6572 531 GCKATSDVPPNLLFTNKYYIREVTQAGVM-----TIRI--HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP 602 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~~~~I~~i~l~g~~-----~~~~--~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~ 602 (1416)
++.+..+...+|+.+....|+..++.... ..+. .....+..++|.+.++.|+..... +.|+...+. ...
T Consensus 55 ~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 55 CAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLAAPTP 131 (337)
T ss_dssp CEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECCCC--
T ss_pred EEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECCCCCc
Confidence 34444444556666666667766665432 1111 334557789999877777766543 378888777 332
Q ss_pred eEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEE
Q psy6572 603 ELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIG 678 (1416)
Q Consensus 603 ~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ 678 (1416)
..+.. ...+..|++.+.+..|+ +-...+.|.+.++........+......+.+|++.|...+|+.+.. ...|.
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~ 208 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL--DNTVR 208 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSEEE
T ss_pred ceeeecccCCCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec--CCcEE
Confidence 22222 34466788877555555 4445678999998765444444344566889999998777776653 34677
Q ss_pred EEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcE
Q psy6572 679 KAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHL 757 (1416)
Q Consensus 679 ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~L 757 (1416)
..++........+. .-..+..|++.+....|+.+ ...+.|...++.......+.. . ...+.+|++. .+.+
T Consensus 209 ~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~~~~~~~-~------~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 209 SWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPDKYQLHL-H------ESCVLSLKFAYCGKW 279 (337)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSCEEEECC-C------SSCEEEEEECTTSSE
T ss_pred EEECCCCceEeeec-CCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCCeEEEcC-C------ccceeEEEECCCCCE
Confidence 77776543332222 33446788888755555554 445778888887665543322 1 2345667764 3455
Q ss_pred EEeecCCCeeEEecccCCCce
Q psy6572 758 FWTDWEMKSIERCDKYTGKNC 778 (1416)
Q Consensus 758 YwtD~~~~~I~~~nk~tG~~~ 778 (1416)
+++-...+.|...+..++...
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEE
T ss_pred EEEecCCCcEEEEECCCCeEE
Confidence 556556667766665555433
No 217
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.25 E-value=0.0062 Score=71.11 Aligned_cols=183 Identities=7% Similarity=-0.023 Sum_probs=105.6
Q ss_pred EEEEEecCCcc-eEEecccccce-eeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCC---Cce--E------
Q psy6572 549 YIREVTQAGVM-TIRIHNQTNAV-GLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATS---PDG--L------ 614 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l~~~~-~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~---p~g--L------ 614 (1416)
.|+.+++.+.. ..+........ ++.+.+.++.|+++.... .|+++.+. +..+.+..+.. |.| |
T Consensus 61 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~---~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 61 NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp EEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT---EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred eEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC---cEEEEECCCCCcEEEEecccccCCCCCEEEeccCC
Confidence 57777776655 22322222222 366788888888776542 68888877 33333433111 111 1
Q ss_pred ----------EEEccCCcEEEee----CCCCeEEEeecCCCceEEEEcCCCCCcceeeecC-CcceEEEeeCCCC----c
Q psy6572 615 ----------TVDWVGRNLYWCD----KGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNP-AYGYMYWTDWGQN----A 675 (1416)
Q Consensus 615 ----------AvD~~~~~LYwtD----~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp-~~g~LYWtD~g~~----~ 675 (1416)
++.+.++.|+++. .....|.+.++.+...+.+. ........+++.| ..++|+++..+.. .
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~ 216 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDA 216 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSC
T ss_pred ccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCc
Confidence 1122233333333 33457888888776555554 2344567888988 5566666543322 4
Q ss_pred eEEEEecCCCCCEEEeecC-CCCCeeEEeecCCCeEEEecC--CCCe--EEEEeCCCCceEEEEe
Q psy6572 676 HIGKAKMDGSNPKVIISKN-LSWPNALTISYETNELFWGDA--HEDY--IAVSDLNGENIKIIVS 735 (1416)
Q Consensus 676 ~I~ra~mDGs~r~vlv~~~-l~~P~gLaiD~~~~rLYWtD~--~~~~--I~~~~ldG~~r~~v~~ 735 (1416)
+|++++++|...+.+.... ...+..+++.+...+|+++.. .... |+.+++.+...+.+..
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 7999999887766655422 223566788877777877732 2334 8999987666555543
No 218
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.21 E-value=0.01 Score=75.25 Aligned_cols=197 Identities=10% Similarity=0.064 Sum_probs=117.8
Q ss_pred cCCCe-EEEeeccCCCccEEEEecC----CCCeEEeec------CCCceEEEEccCCcEEEeeCC---------CCeEEE
Q psy6572 576 WVDNC-LYWSDVTMHGSSIRRSCNN----SQPELLFPA------TSPDGLTVDWVGRNLYWCDKG---------LDTIEV 635 (1416)
Q Consensus 576 ~~~~~-LYwtD~~~~~~~I~r~~l~----s~~~~l~~l------~~p~gLAvD~~~~~LYwtD~~---------~~~I~v 635 (1416)
+.+++ |+++.... ..|+++.++ +....|... ..+.++++.+.++.|+++... ..+|++
T Consensus 88 PDg~~~la~~~~~~--~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 88 PAGGPLLVFTHFGD--QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSSSCEEEEEBTTT--CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred cCCCeEEEEEECCC--CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 55777 77776543 378888876 344444331 235678888888889887643 247999
Q ss_pred eecCC------CceEEEEcCCCCCcceeeecCCcceEEEeeCCC------CceEEEEecCCCC----CEEEeecCCCCCe
Q psy6572 636 AKLDG------RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ------NAHIGKAKMDGSN----PKVIISKNLSWPN 699 (1416)
Q Consensus 636 ~~ldG------~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~------~~~I~ra~mDGs~----r~vlv~~~l~~P~ 699 (1416)
.++++ ...+.|.........++++.|...+|+|+.+.. ...|+..+++++. .+.|.......+.
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 99988 555444313334567889999999999987543 2479999998533 3334333345667
Q ss_pred eEEeecCCCeEEEecCCCC--eEEEEeCCCCceEEEEeccCCCC--cccccceeEEEe-cCcEEEeec-CCCeeEEeccc
Q psy6572 700 ALTISYETNELFWGDAHED--YIAVSDLNGENIKIIVSRRMDPT--INLHHVFALAVF-EDHLFWTDW-EMKSIERCDKY 773 (1416)
Q Consensus 700 gLaiD~~~~rLYWtD~~~~--~I~~~~ldG~~r~~v~~~~~~p~--~~l~~P~~lav~-~d~LYwtD~-~~~~I~~~nk~ 773 (1416)
.+++.+.. +||++-...+ .|+++++++...+.++....... .-......+++. +++||++.. ....|+.++..
T Consensus 246 ~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 324 (662)
T 3azo_A 246 QAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPE 324 (662)
T ss_dssp EEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETT
T ss_pred ceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECC
Confidence 78887644 4666654444 89999886655555443221000 000012356664 566665543 33346655543
Q ss_pred CC
Q psy6572 774 TG 775 (1416)
Q Consensus 774 tG 775 (1416)
++
T Consensus 325 ~~ 326 (662)
T 3azo_A 325 SG 326 (662)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 219
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.20 E-value=0.0092 Score=76.27 Aligned_cols=193 Identities=10% Similarity=0.090 Sum_probs=115.4
Q ss_pred CCeEEEEecEEEEEEecCC-----cc-eEEeccccc---------------ceeeeeecCCCeEEEeecc----------
Q psy6572 539 PPNLLFTNKYYIREVTQAG-----VM-TIRIHNQTN---------------AVGLDFDWVDNCLYWSDVT---------- 587 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g-----~~-~~~~~~l~~---------------~~~l~~D~~~~~LYwtD~~---------- 587 (1416)
..+|+++....|+.+++.+ .. ..+...... +.+++|.+.++.|+++...
T Consensus 132 G~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~ 211 (706)
T 2z3z_A 132 GDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIV 211 (706)
T ss_dssp SSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEE
T ss_pred CCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEee
Confidence 3456666667788888775 43 222221111 4688898888888887521
Q ss_pred --------------------CCCccEEEEecCCCC-eEEee----cCCCceEEEEccCCcEEEeeCCC----CeEEEeec
Q psy6572 588 --------------------MHGSSIRRSCNNSQP-ELLFP----ATSPDGLTVDWVGRNLYWCDKGL----DTIEVAKL 638 (1416)
Q Consensus 588 --------------------~~~~~I~r~~l~s~~-~~l~~----l~~p~gLAvD~~~~~LYwtD~~~----~~I~v~~l 638 (1416)
.....|+++.+.+.. ..+.. ...+..+++.+.++.|+++.... ..|.+.++
T Consensus 212 ~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 212 DYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp ECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 011356666666322 22221 12245677777777788854332 37888888
Q ss_pred CCC-ceEEEEc-CCC---CCcceeeecC--CcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCe-e-EEeecCCCe
Q psy6572 639 DGR-FRKVLIN-KGL---QEPRGIALNP--AYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPN-A-LTISYETNE 709 (1416)
Q Consensus 639 dG~-~~~vLi~-~~l---~~P~gIavDp--~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~-g-LaiD~~~~r 709 (1416)
.+. ..+.+.. ... ....++++.| ...+||.+......+|+.++++|...+.|.. -.++. . +++++..++
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~ 369 (706)
T 2z3z_A 292 ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTR 369 (706)
T ss_dssp TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSE
T ss_pred CCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCE
Confidence 765 4444442 111 1236789988 6666666655444688888877765444432 22333 3 788887888
Q ss_pred EEEecCCCC----eEEEEeCCCCceEEE
Q psy6572 710 LFWGDAHED----YIAVSDLNGENIKII 733 (1416)
Q Consensus 710 LYWtD~~~~----~I~~~~ldG~~r~~v 733 (1416)
||++-...+ .|+++++++...+.|
T Consensus 370 l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 370 LYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred EEEEecCCCCceEEEEEEEcCCCCceec
Confidence 998866544 889999877655444
No 220
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.15 E-value=0.00027 Score=65.67 Aligned_cols=46 Identities=33% Similarity=0.842 Sum_probs=37.6
Q ss_pred CCCc-ccccccCCCCCCcccccceecCCceEEee--CCCceecCCCCCccccCC
Q psy6572 447 EFSC-FVNECNVSHGGQLCAHECIDLKIGYKCAC--RKGYQVHPEDKHLCVDTN 497 (1416)
Q Consensus 447 e~~C-~i~eC~~~~~~~~Cs~~C~nt~~gy~C~C--~~Gy~L~p~d~~tC~did 497 (1416)
...| +|+||... . |.+.|++++++|+|.| .+||+|. .++++|++|+
T Consensus 39 g~~C~dideC~~~--~--C~~~C~n~~g~y~C~C~g~~G~~~~-~~~~~C~di~ 87 (87)
T 1z6c_A 39 SKSCEDIDECSEN--M--CAQLCVNYPGGYTCYCDGKKGFKLA-QDQKSCEVVS 87 (87)
T ss_dssp TTEEECCCHHHHS--C--CSSEECCCSSSCCEECCSSSCCBCC-TTSSSCBCCC
T ss_pred CCcCCCcCeeCCC--C--CCCEEEccCCCEEEECCCCcCCccc-CCCCcceECc
Confidence 3456 68889643 3 9999999999999999 6999998 7788898875
No 221
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.15 E-value=0.036 Score=64.57 Aligned_cols=200 Identities=10% Similarity=0.014 Sum_probs=117.2
Q ss_pred eeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-c-CCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc
Q psy6572 572 LDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-A-TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN 648 (1416)
Q Consensus 572 l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l-~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~ 648 (1416)
++|.+.+++|+++-.......|+.+.+. +....+.. . ....++++.+.++.||++... ..|.+.++.+...+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeee
Confidence 5677778877776553222358888777 33333333 1 222367888889999998754 589999988776555543
Q ss_pred CCCCCc--ceeeecCCcceEEEee--------------------CCCCceEEEEecCCCCCEEEeecCCCCCeeEEeec-
Q psy6572 649 KGLQEP--RGIALNPAYGYMYWTD--------------------WGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISY- 705 (1416)
Q Consensus 649 ~~l~~P--~gIavDp~~g~LYWtD--------------------~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~- 705 (1416)
...... ...++++...+|+... .+....|.+.++.+...+.|.. .-.+...+++.+
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQWLGHPIYRPY 198 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETT
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CCccccccEECCC
Confidence 222211 1223466555554221 1123578999988766555554 334567888987
Q ss_pred CCCeEEEecCC-----CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecC-CC---eeEEecccC
Q psy6572 706 ETNELFWGDAH-----EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWE-MK---SIERCDKYT 774 (1416)
Q Consensus 706 ~~~rLYWtD~~-----~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~-~~---~I~~~nk~t 774 (1416)
..++|+++... ...|+.++++|...+.|..... -.....+++. +.+|+++... .. .|+.++..+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE-----GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT-----TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC-----CcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 67777665443 4489999998887766644210 0112233442 4457554332 22 377777766
Q ss_pred CCce
Q psy6572 775 GKNC 778 (1416)
Q Consensus 775 G~~~ 778 (1416)
|...
T Consensus 274 g~~~ 277 (388)
T 3pe7_A 274 LENR 277 (388)
T ss_dssp CCEE
T ss_pred CceE
Confidence 6543
No 222
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.13 E-value=0.021 Score=72.93 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=136.6
Q ss_pred EecCCCCCeEEEEecEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-----CCe-EE
Q psy6572 533 KATSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-----QPE-LL 605 (1416)
Q Consensus 533 ~a~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-----~~~-~l 605 (1416)
.+.++. ..++++....|+.+++.+.. ..+......+..++|.+.++.|+++.. ..|+.+.+.+ ... .+
T Consensus 87 ~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~----~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 87 TLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN----HNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp EEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET----TEEEEEECBCTTSCCCCCEES
T ss_pred EEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC----CeEEEEecCcccccCCCcEEe
Confidence 334333 67777777788888887655 333333445677888888888877632 2677777654 322 22
Q ss_pred eecC----------------CCceEEEEccCCcEEEeeC--------------------------------CCCeEEEee
Q psy6572 606 FPAT----------------SPDGLTVDWVGRNLYWCDK--------------------------------GLDTIEVAK 637 (1416)
Q Consensus 606 ~~l~----------------~p~gLAvD~~~~~LYwtD~--------------------------------~~~~I~v~~ 637 (1416)
.... .+.++++.+-++.|+++.. ...+|.+.+
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 2211 2478899888888888751 235788888
Q ss_pred cCCCceEEEEcC--CCCCcceeeecCCcceEEEeeCCC---CceEEEEecCCC-CCEEEeec-CCC---CCeeEEeec--
Q psy6572 638 LDGRFRKVLINK--GLQEPRGIALNPAYGYMYWTDWGQ---NAHIGKAKMDGS-NPKVIISK-NLS---WPNALTISY-- 705 (1416)
Q Consensus 638 ldG~~~~vLi~~--~l~~P~gIavDp~~g~LYWtD~g~---~~~I~ra~mDGs-~r~vlv~~-~l~---~P~gLaiD~-- 705 (1416)
+++...+.+... ....+..+++.|...+|+++.... ...|...++.+. ..+.+... .-. ...++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~ 321 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS 321 (706)
T ss_dssp TTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTC
T ss_pred CCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCC
Confidence 876654433321 123467899999988888854322 236888888765 44444432 222 235678865
Q ss_pred CCCeEEEecC-CCCeEEEEeCCCCceEEEEeccCCCCccccccee-EEE--ecCcEEEeecCCC----eeEEecccCCC
Q psy6572 706 ETNELFWGDA-HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFA-LAV--FEDHLFWTDWEMK----SIERCDKYTGK 776 (1416)
Q Consensus 706 ~~~rLYWtD~-~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~-lav--~~d~LYwtD~~~~----~I~~~nk~tG~ 776 (1416)
..+.||.+.. +..+|+.++++|...+.|.... ....+ +++ .+.+||++....+ .|++++..++.
T Consensus 322 dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~-------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 322 NNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE-------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSCEEEECCCSS-------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCEEEEEEccCCccEEEEEECCCCEEEecCCCC-------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 4444444433 2357888887777655553321 11122 344 3456777765543 67777655543
No 223
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.12 E-value=0.36 Score=56.68 Aligned_cols=221 Identities=9% Similarity=-0.052 Sum_probs=129.8
Q ss_pred CeEEEEecEEEEEEecCCcc-e-EEec-ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCce
Q psy6572 540 PNLLFTNKYYIREVTQAGVM-T-IRIH-NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDG 613 (1416)
Q Consensus 540 ~~li~s~~~~I~~i~l~g~~-~-~~~~-~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~g 613 (1416)
.++..+....|+..++.... . ++.. ....+.+|+|.+.+..|+..... +.|....+.+.. ..+.. ...+..
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~ 181 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVESQTKLRTMAGHQARVGC 181 (401)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECcCCeEEEEecCCCCceEE
Confidence 34455556677777776554 2 2222 34557889998877777666544 367777776322 22222 334445
Q ss_pred EEEEccCCcEEEeeCCCCeEEEeecCC-CceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee
Q psy6572 614 LTVDWVGRNLYWCDKGLDTIEVAKLDG-RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS 692 (1416)
Q Consensus 614 LAvD~~~~~LYwtD~~~~~I~v~~ldG-~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~ 692 (1416)
|++ .++++++-...+.|.+.++.. ......+........+|++.|...+|+..... ..|...++........+.
T Consensus 182 ~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 182 LSW---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND--NVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp EEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTCSSEEEEEC
T ss_pred EEE---CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC--CeEEEccCCCCCccEEec
Confidence 554 356667777788999999873 33333333445668899999976666665532 356666776544443444
Q ss_pred cCCCCCeeEEeecCCCeEEEecC--CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cC-cEEEee-cCCCee
Q psy6572 693 KNLSWPNALTISYETNELFWGDA--HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-ED-HLFWTD-WEMKSI 767 (1416)
Q Consensus 693 ~~l~~P~gLaiD~~~~rLYWtD~--~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d-~LYwtD-~~~~~I 767 (1416)
........|++.+....|+.+-. ..+.|...++........+.. -....+|++. .+ +|+.+. ...+.|
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~g~~dg~i 329 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-------GSQVTSLIWSPHSKEIMSTHGFPDNNL 329 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-------SSCEEEEEECSSSSEEEEEECTTTCEE
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-------CCcEEEEEECCCCCeEEEEeecCCCcE
Confidence 44556789999887778887754 567888888765443333332 1235566663 23 344432 245555
Q ss_pred EEecccCC
Q psy6572 768 ERCDKYTG 775 (1416)
Q Consensus 768 ~~~nk~tG 775 (1416)
...+..++
T Consensus 330 ~v~~~~~~ 337 (401)
T 4aez_A 330 SIWSYSSS 337 (401)
T ss_dssp EEEEEETT
T ss_pred EEEecCCc
Confidence 55544443
No 224
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.10 E-value=0.54 Score=52.94 Aligned_cols=240 Identities=10% Similarity=-0.048 Sum_probs=129.7
Q ss_pred ceEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe--EE
Q psy6572 531 GCKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE--LL 605 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~--~l 605 (1416)
++.+..+..++|+.+. ...|+..++.... ..+......+.+++|.+..+.|+..... +.|+..++.+... .+
T Consensus 17 ~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 17 KGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECCCCcEEEEE
Confidence 3444444445555443 3456666665443 2222233456778888877777665443 3788777773222 22
Q ss_pred ee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 606 FP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 606 ~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
.. ...+..|++.+.+.. +.+-...++|.+-++.... ....+.........|++.|..+.++.+-.. ...|..-++.
T Consensus 94 ~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~-D~~v~iwd~~ 171 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL-DRTVKVWSLG 171 (304)
T ss_dssp ECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET-TSEEEEEETT
T ss_pred eCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC-CCeEEEEECC
Confidence 22 556778899876554 4566667888888876543 333333444567899999976665555322 2356666664
Q ss_pred CCCC-EEEeecCCCCCeeEEeecC-CCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEe
Q psy6572 684 GSNP-KVIISKNLSWPNALTISYE-TNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWT 760 (1416)
Q Consensus 684 Gs~r-~vlv~~~l~~P~gLaiD~~-~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwt 760 (1416)
.... ..+..........+++.+. .+.++.+-...+.|...++........+.+. ......+++. .+.++.+
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH------MSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEECSSSSEEEE
T ss_pred CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC------CCCEEEEEECCCCCEEEE
Confidence 3332 2332222222344555432 3444444445667777777554433333332 2233445553 3455666
Q ss_pred ecCCCeeEEecccCCCceEEE
Q psy6572 761 DWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 761 D~~~~~I~~~nk~tG~~~~~l 781 (1416)
-...+.|..-+..+++....+
T Consensus 246 ~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 246 GSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EETTSCEEEEETTTCCEEEEE
T ss_pred EcCCCeEEEEECCCCceeeec
Confidence 666666666665555544443
No 225
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.09 E-value=0.12 Score=59.42 Aligned_cols=230 Identities=9% Similarity=0.016 Sum_probs=123.7
Q ss_pred ceEecCCCCCeEEEE-ecEEEEEEecCCcc----eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeE
Q psy6572 531 GCKATSDVPPNLLFT-NKYYIREVTQAGVM----TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PEL 604 (1416)
Q Consensus 531 sC~a~~~~~~~li~s-~~~~I~~i~l~g~~----~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~ 604 (1416)
++.+......+|+++ ....|+..++.+.. ..+......+.+|+|.+.++.|+..... +.|+...+.+. ...
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLKGRTWKP 88 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEETTEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECCCCeeee
Confidence 344444434455554 34556666665542 2223344567889999877777665543 36776666522 111
Q ss_pred Ee---e-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc----eEEEEcCCCCCcceeeecCCcceEEEeeCCCCce
Q psy6572 605 LF---P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF----RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAH 676 (1416)
Q Consensus 605 l~---~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~----~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~ 676 (1416)
.. . ...+..|++.+.+..|+.+ ...+.|.+.+++... ...+.......+.+|++.|...+|+...... .
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~ 165 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--K 165 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS--C
T ss_pred eEEeecCCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC--C
Confidence 11 1 4456788888766555544 445677777776544 2223223355688999999876666655332 4
Q ss_pred EEEEecCC-----------------CCCE-EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccC
Q psy6572 677 IGKAKMDG-----------------SNPK-VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRM 738 (1416)
Q Consensus 677 I~ra~mDG-----------------s~r~-vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~ 738 (1416)
|...++.. .... ..+...-.....|++.+....|+.+ ...+.|...++........+...
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~- 243 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV-SHDSTVCLADADKKMAVATLASE- 243 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE-ETTTEEEEEEGGGTTEEEEEECS-
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE-eCCCEEEEEECCCCceeEEEccC-
Confidence 54444321 1111 1122233456789998755555544 45678888887543333333322
Q ss_pred CCCcccccceeEEEe-cCcEEEeecCCCeeEEecccC
Q psy6572 739 DPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYT 774 (1416)
Q Consensus 739 ~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~t 774 (1416)
.....+|++. .+.++.+- ..+.|...+..+
T Consensus 244 -----~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 244 -----TLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -----SCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred -----CCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 2234667765 33443333 455555444333
No 226
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.08 E-value=0.00031 Score=73.87 Aligned_cols=51 Identities=35% Similarity=0.847 Sum_probs=43.4
Q ss_pred CCceecCCCCCccccCCcCC--CCC---ccceeeecCCeeeecCCCCcEEecCCCceEec
Q psy6572 481 KGYQVHPEDKHLCVDTNECL--DRP---CSHYCRNTLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 481 ~Gy~L~p~d~~tC~didEC~--~~~---Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
.||++. ..+.+++||. .+. |+|.|+|+.|+|+|.|++||+|..++++|++.
T Consensus 113 ~Gf~~~----~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEAF----YAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEEE----EEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCceee----eeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 677664 3578899998 232 99999999999999999999999999999875
No 227
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.06 Score=62.90 Aligned_cols=229 Identities=8% Similarity=-0.050 Sum_probs=127.9
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP- 607 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~- 607 (1416)
+.+..+...+|+.+. ...|+..+..+.. ..+......+.+|+|.+.++.|+..... +.|+...+.+. ......
T Consensus 113 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETT---CCEEEEETTTTEEEEEECC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecC---CeEEEEECCCCcEEEEeec
Confidence 333333334444443 3345555555544 3333344567889998877777766544 36777766522 111111
Q ss_pred -cCC---------------CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeC
Q psy6572 608 -ATS---------------PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDW 671 (1416)
Q Consensus 608 -l~~---------------p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~ 671 (1416)
... +..+++.+ +..+++-...+.|.+.++........+.........|++.|...+|+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 267 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVD--DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD 267 (425)
T ss_dssp C---------------CCCBSCCEEEE--TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred cccCccceeeccccCCcceeeEEEEcC--CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC
Confidence 111 55666654 445666666788999888765433333344456788999998777776653
Q ss_pred CCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEE
Q psy6572 672 GQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALA 751 (1416)
Q Consensus 672 g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~la 751 (1416)
. ..|...++........+...-.....|++.+.. ++++-...+.|...++........+... -..+.+|+
T Consensus 268 d--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~ 337 (425)
T 1r5m_A 268 D--GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVD------GVPIFAGR 337 (425)
T ss_dssp T--SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECT------TCCEEEEE
T ss_pred C--CEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccC------CccEEEEE
Confidence 2 356666665544333333344456788887644 5555556678888887654443333322 23455666
Q ss_pred Ee-cCcEEEeecCCCeeEEecccCC
Q psy6572 752 VF-EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 752 v~-~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
+. .+.++++-...+.|...+..++
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHH
T ss_pred EcCCCCEEEEEECCCeEEEEECCCC
Confidence 64 3455555555566655544433
No 228
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.07 E-value=0.049 Score=69.86 Aligned_cols=194 Identities=9% Similarity=0.059 Sum_probs=120.2
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecC-C---CCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S---QPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s---~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
+..++|.+.++.|+++.. ..|+.+.+. + ....+.. ...+..+++.+.++.|+++.. +.|.+.++++...
T Consensus 111 v~~~~~SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQ 184 (741)
T ss_dssp SCCCEECTTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEE
T ss_pred cceeEECCCCCEEEEEeC----CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCE
Confidence 567899999998888765 378888887 4 3444443 456778899998888888764 4899999987654
Q ss_pred EEEEcCCC----------------CCcceeeecCCcceEEEeeCCC-------------------------------Cce
Q psy6572 644 KVLINKGL----------------QEPRGIALNPAYGYMYWTDWGQ-------------------------------NAH 676 (1416)
Q Consensus 644 ~vLi~~~l----------------~~P~gIavDp~~g~LYWtD~g~-------------------------------~~~ 676 (1416)
..+..... ..+.++++.|...+|+++.... ...
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 44432221 1258899999988888874321 116
Q ss_pred EEEEecCC-CCCEEEeec--CCCCCeeEEeecCCCeEEEecC----CCCeEEEEeCCCCceEEEEeccCCCCccccccee
Q psy6572 677 IGKAKMDG-SNPKVIISK--NLSWPNALTISYETNELFWGDA----HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFA 749 (1416)
Q Consensus 677 I~ra~mDG-s~r~vlv~~--~l~~P~gLaiD~~~~rLYWtD~----~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~ 749 (1416)
|...++++ ...+.+... .-..+..+++ +...+|+++.. ....|..+++.+...+.++...... .+....+
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~--~~~~~~~ 341 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT--WVPLHNS 341 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS--CCCCCSC
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC--cCCcCCc
Confidence 67777776 554444322 2234567888 77788887643 2347888888766655555432100 0111234
Q ss_pred EEEe-cCcEEEeecCCC--eeEEec
Q psy6572 750 LAVF-EDHLFWTDWEMK--SIERCD 771 (1416)
Q Consensus 750 lav~-~d~LYwtD~~~~--~I~~~n 771 (1416)
+++. .+.++++....+ .|+.++
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEEC
T ss_pred eEECCCCeEEEEecCCCccEEEEEc
Confidence 4553 344666544333 566665
No 229
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.06 E-value=0.0096 Score=74.36 Aligned_cols=162 Identities=10% Similarity=0.000 Sum_probs=107.2
Q ss_pred cceeeeeecCCCeEEEeec--cCCCccEEEEec--CCCCeEEeecCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 568 NAVGLDFDWVDNCLYWSDV--TMHGSSIRRSCN--NSQPELLFPATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~--~~~~~~I~r~~l--~s~~~~l~~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
.+.++++.+. +.||+++. ......|+++.+ ++....+........+++.+.++.++++....+.+.+.++++...
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~ 144 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL 144 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence 4567778766 77888876 222236777877 443333333444556677777877777766656666778877665
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCC--CCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCC-CeE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWG--QNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHE-DYI 720 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g--~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~-~~I 720 (1416)
+.|..... .+++++|...+|+++... ....|++.++++...+.|.. .......+++.+...+||.++... ..|
T Consensus 145 ~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 145 RELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp EEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred EEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEEccCCCeeEE
Confidence 55553222 789999998888876532 22569999988777666543 334457889988777888555432 389
Q ss_pred EEEeCCCCceEEEEe
Q psy6572 721 AVSDLNGENIKIIVS 735 (1416)
Q Consensus 721 ~~~~ldG~~r~~v~~ 735 (1416)
+.+++++...+ ++.
T Consensus 221 ~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 221 VTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEECTTTCCEE-ECC
T ss_pred EEEcCCCCcEE-Ecc
Confidence 99999887776 444
No 230
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.39 Score=54.61 Aligned_cols=196 Identities=9% Similarity=-0.023 Sum_probs=112.1
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP 607 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~ 607 (1416)
+.+......+|+.+. ...|+..++.... ..+......+.+|+|.+.++.|+..... +.|+...+. ........
T Consensus 37 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp EEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEee
Confidence 333333334444443 3346666655443 2233344567789998877777665443 378888777 33222222
Q ss_pred -cCCCceEEEEccCCcEEEeeCC----CCeEEEeecCCCc-------------eEEEEcCCCCCcceeeecCCcceEEEe
Q psy6572 608 -ATSPDGLTVDWVGRNLYWCDKG----LDTIEVAKLDGRF-------------RKVLINKGLQEPRGIALNPAYGYMYWT 669 (1416)
Q Consensus 608 -l~~p~gLAvD~~~~~LYwtD~~----~~~I~v~~ldG~~-------------~~vLi~~~l~~P~gIavDp~~g~LYWt 669 (1416)
...+..|++.+.+..|+.+... .+.|.+.++.... ..+...........+++.|...+|+.+
T Consensus 114 ~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 114 SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 5567788898877766665443 2677777665321 111111223378889999987777776
Q ss_pred eCCCCceEEEEecCCCCC-EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEE
Q psy6572 670 DWGQNAHIGKAKMDGSNP-KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 670 D~g~~~~I~ra~mDGs~r-~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v 733 (1416)
... ..|...++..... ...+...-....+|++.+....|+.+ ...+.|...++........
T Consensus 194 ~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 194 HKD--GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ETT--SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEE
T ss_pred cCC--CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceeee
Confidence 532 4677777765322 22333344556789998755455444 4567888888765443333
No 231
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.05 E-value=0.24 Score=63.86 Aligned_cols=239 Identities=10% Similarity=-0.053 Sum_probs=138.5
Q ss_pred ceEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEE
Q psy6572 531 GCKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELL 605 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l 605 (1416)
++.+..+..++|+++. ...|+..++.... ..+......+.+++|.+.++.|...... +.|....+.+ .. ..+
T Consensus 17 ~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEE
Confidence 4555555556666654 3356666655443 2333344567889999988888776553 3788888773 22 223
Q ss_pred ee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC-ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 606 FP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR-FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 606 ~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~-~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
.. ...+..|++.+.+..|+. -...+.|.+.++... .....+.........+++.|..+.++++-.. ...|...++.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~v~vwd~~ 171 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL-DRTVKVWSLG 171 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET-TSEEEEEETT
T ss_pred ecCCCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC-CCeEEEEECC
Confidence 22 556778888876666654 445678888888765 3333333445567899999955555544322 2367777776
Q ss_pred CCCCEEEee-cCCCCCeeEEeecC-CCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEe
Q psy6572 684 GSNPKVIIS-KNLSWPNALTISYE-TNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWT 760 (1416)
Q Consensus 684 Gs~r~vlv~-~~l~~P~gLaiD~~-~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwt 760 (1416)
.......+. ........+++.+. .+.++++-...+.|...++........+... .....++++. .+.++++
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH------MSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC------SSCEEEEEECSSSSEEEE
T ss_pred CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC------CCCEEEEEEcCCCCEEEE
Confidence 544433333 33355677787651 3444445455678888887554433333322 2334556654 3445555
Q ss_pred ecCCCeeEEecccCCCceEE
Q psy6572 761 DWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 761 D~~~~~I~~~nk~tG~~~~~ 780 (1416)
-...+.|...+..++.....
T Consensus 246 ~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 246 GSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp EETTSCEEEEETTTCSEEEE
T ss_pred EeCCCeEEEEECCCCcEEEE
Confidence 55556666665555544333
No 232
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.05 E-value=0.017 Score=74.12 Aligned_cols=188 Identities=8% Similarity=-0.003 Sum_probs=116.8
Q ss_pred CCeEEEEecEEEEEEecCCc---c-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-c----
Q psy6572 539 PPNLLFTNKYYIREVTQAGV---M-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-A---- 608 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g~---~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l---- 608 (1416)
..+|+++....|+.+++.+. . ..+......+..++|.+.+++|+++... .|+.+.+.+ ....+.. .
T Consensus 120 g~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~----~i~~~d~~~g~~~~~~~~~~~~~ 195 (741)
T 2ecf_A 120 AQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGRQMQLTADGSTTI 195 (741)
T ss_dssp SSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT----EEEEEETTTTEEEECCCCCCSSE
T ss_pred CCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC----cEEEEecCCCCEEEeccCCccce
Confidence 45667766677888888776 4 3333333557788999988888877532 688877763 2222222 1
Q ss_pred -------------CCCceEEEEccCCcEEEeeCCC--------------------------------CeEEEeecCC-Cc
Q psy6572 609 -------------TSPDGLTVDWVGRNLYWCDKGL--------------------------------DTIEVAKLDG-RF 642 (1416)
Q Consensus 609 -------------~~p~gLAvD~~~~~LYwtD~~~--------------------------------~~I~v~~ldG-~~ 642 (1416)
..+.++++.+-++.|+++.... .+|.+.++++ ..
T Consensus 196 ~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 275 (741)
T 2ecf_A 196 GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ 275 (741)
T ss_dssp EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC
T ss_pred eccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc
Confidence 1257889998899898874321 1677777776 54
Q ss_pred eEEEEcC--CCCCcceeeecCCcceEEEeeC--C-CCceEEEEecCCCCCEEEeecCC-C---CCeeEEeecCCCeEEEe
Q psy6572 643 RKVLINK--GLQEPRGIALNPAYGYMYWTDW--G-QNAHIGKAKMDGSNPKVIISKNL-S---WPNALTISYETNELFWG 713 (1416)
Q Consensus 643 ~~vLi~~--~l~~P~gIavDp~~g~LYWtD~--g-~~~~I~ra~mDGs~r~vlv~~~l-~---~P~gLaiD~~~~rLYWt 713 (1416)
.+.+... ....+..+++ |...+|+++.. + ....|.+.++.+...+.++.... . ....+++.+. ++++|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~ 353 (741)
T 2ecf_A 276 TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD-GSILWS 353 (741)
T ss_dssp CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT-SCEEEE
T ss_pred eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC-CeEEEE
Confidence 4433322 2334678899 88888887643 1 23578888887666555554321 2 2357788764 446666
Q ss_pred cCCC--CeEEEEeCCCCceEEE
Q psy6572 714 DAHE--DYIAVSDLNGENIKII 733 (1416)
Q Consensus 714 D~~~--~~I~~~~ldG~~r~~v 733 (1416)
-... ..|+.++++|. .+.|
T Consensus 354 ~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 354 SERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp ECTTSSCEEEEECSSSC-EEES
T ss_pred ecCCCccEEEEEcCCCC-eeee
Confidence 4433 47888888877 4444
No 233
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.00 E-value=0.24 Score=58.29 Aligned_cols=229 Identities=10% Similarity=0.019 Sum_probs=129.8
Q ss_pred CCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC--eEEee-cCCC
Q psy6572 539 PPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP--ELLFP-ATSP 611 (1416)
Q Consensus 539 ~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~--~~l~~-l~~p 611 (1416)
..+|+.+. ...|+..++.... ..+......+..|+++ .+.|+..... +.|+...+. ... ..+.. ...+
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v 220 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRS---GAIHHHDVRIANHQIGTLQGHSSEV 220 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSCE
T ss_pred CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCC---CCEEEEecccCcceeeEEcCCCCCe
Confidence 34444443 3446666655443 2222333455667664 3444443332 377777776 222 22222 5567
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCC-CCceEEEEecCCCCCEEE
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWG-QNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g-~~~~I~ra~mDGs~r~vl 690 (1416)
.+|++.+ .++++++-...+.|.+.++........+........+|++.|...+|+.+-.+ ....|...++........
T Consensus 221 ~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 221 CGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE
T ss_pred eEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE
Confidence 7888887 45555565566789999987655444444455678999999988888887532 234787778765443333
Q ss_pred eecCCCCCeeEEeecCCCeEEEec-CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeE
Q psy6572 691 ISKNLSWPNALTISYETNELFWGD-AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIE 768 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD-~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~ 768 (1416)
+. .-.....|++.+....|+.+. ...+.|...++.......+..... ......+|++. .+.++++-...+.|.
T Consensus 300 ~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~----h~~~v~~~~~s~dg~~l~s~~~dg~i~ 374 (401)
T 4aez_A 300 VD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA----HDTRVLYSALSPDGRILSTAASDENLK 374 (401)
T ss_dssp EE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC----CSSCCCEEEECTTSSEEEEECTTSEEE
T ss_pred Ee-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC----CCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 33 234568899987666666653 256778888876543333322110 12345567764 345555555666676
Q ss_pred EecccCCCce
Q psy6572 769 RCDKYTGKNC 778 (1416)
Q Consensus 769 ~~nk~tG~~~ 778 (1416)
.-+..++...
T Consensus 375 iw~~~~~~~~ 384 (401)
T 4aez_A 375 FWRVYDGDHV 384 (401)
T ss_dssp EEECCC----
T ss_pred EEECCCCccc
Confidence 6665555543
No 234
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.00 E-value=0.00027 Score=65.56 Aligned_cols=45 Identities=24% Similarity=0.598 Sum_probs=35.9
Q ss_pred CCCc-ccccccCCCCCCccc-ccceecCCceEEeeCCCceecCCCCCccc
Q psy6572 447 EFSC-FVNECNVSHGGQLCA-HECIDLKIGYKCACRKGYQVHPEDKHLCV 494 (1416)
Q Consensus 447 e~~C-~i~eC~~~~~~~~Cs-~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~ 494 (1416)
...| +|+||...+.. |. +.|+|++++|+|.|++||.+. .++++|+
T Consensus 40 g~~C~dideC~~~~~~--C~~~~C~n~~g~y~C~C~~G~~~~-~~~~~Ci 86 (86)
T 1lmj_A 40 MKNCMDIDECQRDPLL--CRGGVCHNTEGSYRCECPPGHQLS-PNISACI 86 (86)
T ss_dssp SSSEEECCHHHHCSST--TTTSEEEEETTEEEEESCTTSCCC-SSSCCCC
T ss_pred CCccCCcccccCCCCc--CCCCEeEcCCCCEEEECcCCcccC-CCCCccC
Confidence 4567 78999765544 76 589999999999999999998 6777663
No 235
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.14 Score=61.54 Aligned_cols=154 Identities=10% Similarity=0.047 Sum_probs=95.1
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecC--C--CCeEEe--e-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--S--QPELLF--P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s--~~~~l~--~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
.+.+|+|.+.++.||.+-... +.|+...+. + ...++. . ...+.+|++.+.+..|+.+.. .+.|.+.++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD--KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG--TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCC--CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCC
Confidence 467899999888876665443 356666555 2 223332 1 356778999987777777654 67788888754
Q ss_pred CceE-----EEEcCCCCCcceeeecCC---cceEEEeeCCCCceEEEEecCCCCC-EEEeecCCCCCeeEEeecCCCeEE
Q psy6572 641 RFRK-----VLINKGLQEPRGIALNPA---YGYMYWTDWGQNAHIGKAKMDGSNP-KVIISKNLSWPNALTISYETNELF 711 (1416)
Q Consensus 641 ~~~~-----vLi~~~l~~P~gIavDp~---~g~LYWtD~g~~~~I~ra~mDGs~r-~vlv~~~l~~P~gLaiD~~~~rLY 711 (1416)
.... ++. .....+..|++.|. ..+|+.+... ..|...++..... ..++...-..+..|++. ....|+
T Consensus 181 ~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 181 IPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRD--EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp CCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETT--SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCC--CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 3221 222 23356788999998 6677666643 3566666654333 33343444567889987 444454
Q ss_pred EecCCCCeEEEEeCCCCc
Q psy6572 712 WGDAHEDYIAVSDLNGEN 729 (1416)
Q Consensus 712 WtD~~~~~I~~~~ldG~~ 729 (1416)
+-...+.|...++....
T Consensus 257 -s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 257 -SAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp -EEESSSEEEEEETTTCC
T ss_pred -EEeCCCeEEEEECCCCc
Confidence 44456788888875443
No 236
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.92 E-value=0.077 Score=63.42 Aligned_cols=160 Identities=10% Similarity=0.035 Sum_probs=105.2
Q ss_pred cccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC--e------EEee-cCCCceEEEEccCCcEEEeeCCCCeE
Q psy6572 564 HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP--E------LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTI 633 (1416)
Q Consensus 564 ~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~--~------~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I 633 (1416)
.....+.+|++.+....++++-... +.|....+.. .. . .+.. ...+..|++.+..++++.+....+.|
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDD--HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTT--SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCC--CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 3445678899988777344443332 3787777762 11 1 1111 44577888888789999999889999
Q ss_pred EEeecCCC----ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC-CCEEEeecCCCCCeeEEeecCCC
Q psy6572 634 EVAKLDGR----FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS-NPKVIISKNLSWPNALTISYETN 708 (1416)
Q Consensus 634 ~v~~ldG~----~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs-~r~vlv~~~l~~P~gLaiD~~~~ 708 (1416)
.+.++... ....+ ......++.|++.|...+||++-.. ...|...++... .....+...-.....|++.+...
T Consensus 257 ~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~-dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTV-DAHTAEVNCLSFNPYSEFILATGSA-DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp EEEETTCSCSSSCSEEE-ECCSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred EEEECCCCCCCcceeEe-ecCCCCeEEEEeCCCCCCEEEEEeC-CCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 99998754 23333 2344568999999998877776533 346777777653 22333333445667899987777
Q ss_pred eEEEecCCCCeEEEEeCCC
Q psy6572 709 ELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 709 rLYWtD~~~~~I~~~~ldG 727 (1416)
.|+.+-...+.|...++..
T Consensus 335 ~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCcEEEEeCCC
Confidence 7887776667777777653
No 237
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.92 E-value=0.00036 Score=71.46 Aligned_cols=56 Identities=23% Similarity=0.620 Sum_probs=44.0
Q ss_pred CCCCCCCCCc-ccccccCCCCCCcccccc-eecCCceEEeeCCCceecCCCCCccccCCcC
Q psy6572 441 CGDNSDEFSC-FVNECNVSHGGQLCAHEC-IDLKIGYKCACRKGYQVHPEDKHLCVDTNEC 499 (1416)
Q Consensus 441 C~dgsDe~~C-~i~eC~~~~~~~~Cs~~C-~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC 499 (1416)
|..|.....| ++++|...+++ |.+.| ++++++|+|.|++||.|. .++++|+++++.
T Consensus 73 C~~G~~G~~C~~~deC~~~~~~--C~~~C~~n~~g~y~C~C~~Gy~l~-~dG~~C~~~~~~ 130 (146)
T 1x7a_L 73 CQVGFEGKNCELDATCNIKNGR--CKQFCKTGADSKVLCSCTTGYRLA-PDQKSCKPAVPF 130 (146)
T ss_dssp CCSSEESTTTCEECCTTSGGGS--CSSBCCCCSSSCCCCBCCTTEEEC-TTSSSEEECSSS
T ss_pred cCCCCcCCcCCCCccccCCCCC--CcCCCCCCCCCCEEeEcCCCcEeC-CCCCcCCCCCCC
Confidence 4444334456 45788765555 99999 999999999999999998 789999998874
No 238
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=96.89 E-value=0.00081 Score=68.35 Aligned_cols=66 Identities=23% Similarity=0.647 Sum_probs=45.9
Q ss_pred cceecC--CceEEeeCCCceecC--------CCCCccccCCcCCCCCccc--eee-------ecCCeeeecCCCCcEEec
Q psy6572 467 ECIDLK--IGYKCACRKGYQVHP--------EDKHLCVDTNECLDRPCSH--YCR-------NTLGSYSCSCAPGYALLS 527 (1416)
Q Consensus 467 ~C~nt~--~gy~C~C~~Gy~L~p--------~d~~tC~didEC~~~~Csq--~C~-------nt~gsy~C~C~~Gy~L~~ 527 (1416)
+|+++. ++|+|.|++||.... .+...|.++++|...+|.+ .|+ ++.++|+|.|++||.
T Consensus 13 ~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~--- 89 (143)
T 4d90_A 13 ICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN--- 89 (143)
T ss_dssp EEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE---
T ss_pred EeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc---
Confidence 788876 689999999996220 0122344577887777875 888 777899999999996
Q ss_pred CCCceE-ecC
Q psy6572 528 DKHGCK-ATS 536 (1416)
Q Consensus 528 dg~sC~-a~~ 536 (1416)
|..|. .++
T Consensus 90 -G~~C~~~i~ 98 (143)
T 4d90_A 90 -GIHCQHNIN 98 (143)
T ss_dssp -STTSCEECC
T ss_pred -CCCcccCCC
Confidence 66775 443
No 239
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.044 Score=64.21 Aligned_cols=206 Identities=9% Similarity=0.042 Sum_probs=122.4
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCC---CCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeec
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS---QPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s---~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l 638 (1416)
...+..|+|.+..+.|+..... +.|+...+.. ..+.+.. ...+..|++.+..++++++-...+.|.+.++
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDN---GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESS---SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred CCceEEEEECCCCCeEEEEccC---CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 3457788998877777665443 3677776663 2222322 4567889998876777777777788999988
Q ss_pred CCCc------eEEEE---cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC------CCCCeeEEe
Q psy6572 639 DGRF------RKVLI---NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN------LSWPNALTI 703 (1416)
Q Consensus 639 dG~~------~~vLi---~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~------l~~P~gLai 703 (1416)
.... ....+ ........+|++.|..+.++++-.. ...|...++........+... -.....|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-CCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 7654 22211 1234457899999985655555422 336777777654333333322 345678999
Q ss_pred ecCCCeEEEecCCCC---eEEEEeCCCC-ceEEEEe-ccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCCC
Q psy6572 704 SYETNELFWGDAHED---YIAVSDLNGE-NIKIIVS-RRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 704 D~~~~rLYWtD~~~~---~I~~~~ldG~-~r~~v~~-~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
.+....++++-...+ .|...++... .....+. .. .....+|++. .+.++++-...+.|...+..++.
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH------QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC------SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc------cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 876555555544444 7777776543 2111111 11 2345667764 46666666667777776665555
Q ss_pred ceEEE
Q psy6572 777 NCTSV 781 (1416)
Q Consensus 777 ~~~~l 781 (1416)
....+
T Consensus 297 ~~~~~ 301 (416)
T 2pm9_A 297 QLSQF 301 (416)
T ss_dssp EEEEE
T ss_pred cceee
Confidence 44443
No 240
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.87 E-value=0.00051 Score=69.29 Aligned_cols=60 Identities=23% Similarity=0.714 Sum_probs=40.1
Q ss_pred CCCCCCCCCcc--c-ccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccc
Q psy6572 441 CGDNSDEFSCF--V-NECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSH 506 (1416)
Q Consensus 441 C~dgsDe~~C~--i-~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq 506 (1416)
|..|.....|. + ++|...+++ |.+.|++++++|+|.|++||.|. .++++|.++++ .+|.+
T Consensus 67 C~~G~~G~~C~~~i~d~C~~~~~~--C~~~C~~~~g~y~C~C~~Gy~l~-~~g~~C~~~~~---~pC~~ 129 (134)
T 2vh0_B 67 CLEGFEGKNCELFTRKLCSLDNGD--CDQFCHEEQNSVVCSCARGYTLA-DNGKACIPTGP---YPCGK 129 (134)
T ss_dssp --------------CCGGGTGGGG--CSSEEEEETTEEEEECCTTEEEC-TTSSCEEESSS---SCTTC
T ss_pred CCCCccCCccccCCCCccccCCCC--CCCEeECCCCCEEEECCCCcEEC-CCCCccCcCCC---cCCCC
Confidence 44443344562 4 678655555 99999999999999999999998 78899998876 56644
No 241
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.41 Score=57.31 Aligned_cols=220 Identities=7% Similarity=-0.057 Sum_probs=126.7
Q ss_pred eEecCCCCCeEEEEe--cEEEEEEecC--Ccc--eEEe--cccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC
Q psy6572 532 CKATSDVPPNLLFTN--KYYIREVTQA--GVM--TIRI--HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP 602 (1416)
Q Consensus 532 C~a~~~~~~~li~s~--~~~I~~i~l~--g~~--~~~~--~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~ 602 (1416)
+.+..+...+|+++. ...|+..++. ... ..+. .....+.+|+|.+.+..|+..+.. +.|+.+.+. ...
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDINSIPE 183 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETTSCCC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecCCccc
Confidence 344444455654433 3445555555 333 2222 223557899999988888887654 368877776 221
Q ss_pred -e----EEee-cCCCceEEEEcc--CCcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCC
Q psy6572 603 -E----LLFP-ATSPDGLTVDWV--GRNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQ 673 (1416)
Q Consensus 603 -~----~l~~-l~~p~gLAvD~~--~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~ 673 (1416)
. ++.. ...+..|++.+. .+.++++-...+.|.+.++.... ...++......+..|++. ...+|+... .
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~--~ 260 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG--G 260 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE--S
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe--C
Confidence 1 2333 566788999886 24455555566789988887443 444443445667899998 555565554 2
Q ss_pred CceEEEEecCCCCCEEEeec-------------------------CCCCCeeEEeecCCCeEEEecCCCCeEEEEeC--C
Q psy6572 674 NAHIGKAKMDGSNPKVIISK-------------------------NLSWPNALTISYETNELFWGDAHEDYIAVSDL--N 726 (1416)
Q Consensus 674 ~~~I~ra~mDGs~r~vlv~~-------------------------~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l--d 726 (1416)
...|...++........+.. .-....+|++.+....||.+-...+.|...++ .
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 23677667654432222220 01234578887767778877656677777777 2
Q ss_pred -CCceEEEEeccCCCCcccccceeEEEecCcEEEeec
Q psy6572 727 -GENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDW 762 (1416)
Q Consensus 727 -G~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~ 762 (1416)
+...+.+..-.. -..+.+|++..+.+|++-.
T Consensus 341 ~~~~l~~~~~~~~-----~~~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 341 QKGDLALKQIITF-----PYNVISLSAHNDEFQVTLD 372 (450)
T ss_dssp STTCEEEEEEEEC-----SSCEEEEEEETTEEEEEEC
T ss_pred CCCceeeccEecc-----CCceEEEEecCCcEEEEEe
Confidence 222222222110 1457888888777777643
No 242
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.85 E-value=0.4 Score=53.81 Aligned_cols=183 Identities=7% Similarity=-0.048 Sum_probs=110.8
Q ss_pred CeEEEEe-cEEEEEEecCCcc----eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-C-eEEee-cCCC
Q psy6572 540 PNLLFTN-KYYIREVTQAGVM----TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-P-ELLFP-ATSP 611 (1416)
Q Consensus 540 ~~li~s~-~~~I~~i~l~g~~----~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~-~~l~~-l~~p 611 (1416)
.+|+.+. ...|+..++.... ..+......+..++|.+.++.|+..... +.|+...+.+. . ..+.. ...+
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~~~~~~~~~~~~~~i 186 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGA 186 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCE
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC---CcEEEEeCCCCceeeeeecccCce
Confidence 3444433 4556666665543 1222334456788998877777766544 36777777632 1 12222 4556
Q ss_pred ceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEe
Q psy6572 612 DGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVII 691 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv 691 (1416)
..|++.+.+..|+ +-...+.|.+.++........+ .....+..|++.|...+|+..... ..|...++.......+
T Consensus 187 ~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~--~~i~~~~~~~~~~~~~- 261 (337)
T 1gxr_A 187 SCIDISNDGTKLW-TGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMES--SNVEVLHVNKPDKYQL- 261 (337)
T ss_dssp EEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETT--SCEEEEETTSSCEEEE-
T ss_pred EEEEECCCCCEEE-EEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCC--CcEEEEECCCCCeEEE-
Confidence 7888887555444 5556678999998765433333 234457899999998888777632 3677777776554332
Q ss_pred ecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceE
Q psy6572 692 SKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIK 731 (1416)
Q Consensus 692 ~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~ 731 (1416)
......+..|++.+....|+ +-...+.|...++......
T Consensus 262 ~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 262 HLHESCVLSLKFAYCGKWFV-STGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEE
T ss_pred cCCccceeEEEECCCCCEEE-EecCCCcEEEEECCCCeEE
Confidence 33345567899986544444 4445678888887654443
No 243
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.077 Score=62.10 Aligned_cols=229 Identities=9% Similarity=-0.036 Sum_probs=130.5
Q ss_pred CCeEEEEe-cEEEEEEecCC----cc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--------e
Q psy6572 539 PPNLLFTN-KYYIREVTQAG----VM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--------E 603 (1416)
Q Consensus 539 ~~~li~s~-~~~I~~i~l~g----~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--------~ 603 (1416)
..+|+.+. ...|+..++.. .. ..+......+..|+|.+..+.++++-... +.|+...+.+.. .
T Consensus 79 ~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 79 NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN--GEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS--SCEEBCBTTTTSSCTTTCCCB
T ss_pred CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC--CeEEEEECCCCcccccccccc
Confidence 33444433 34566666654 21 22223345577899988734444443332 367777776221 1
Q ss_pred EE---ee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCC------CCCcceeeecCCcceEEEeeCCC
Q psy6572 604 LL---FP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKG------LQEPRGIALNPAYGYMYWTDWGQ 673 (1416)
Q Consensus 604 ~l---~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~------l~~P~gIavDp~~g~LYWtD~g~ 673 (1416)
.+ .. ...+.+|++.+.+++++++-...+.|.+.++........+... ...+..|++.|....++++-...
T Consensus 157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 157 TPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred ccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 12 11 4567889998877788888888889999998765443333322 45688999999875555543222
Q ss_pred C--ceEEEEecCCC-CCEEEee-cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCccccccee
Q psy6572 674 N--AHIGKAKMDGS-NPKVIIS-KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFA 749 (1416)
Q Consensus 674 ~--~~I~ra~mDGs-~r~vlv~-~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~ 749 (1416)
. ..|...++... .....+. ........|++.+..++++++-...+.|...++........+... -....+
T Consensus 237 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~------~~~v~~ 310 (416)
T 2pm9_A 237 DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR------GNWCFK 310 (416)
T ss_dssp SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS------SSCCCC
T ss_pred CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC------CCceEE
Confidence 1 15656666543 2222222 233456788887645565555556678888887544333333322 233456
Q ss_pred EEEec-C-cEEEeecCCCeeEEecccCC
Q psy6572 750 LAVFE-D-HLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 750 lav~~-d-~LYwtD~~~~~I~~~nk~tG 775 (1416)
|++.. + .++.+-...+.|...+..++
T Consensus 311 ~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 311 TKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 77643 3 57777666666655554433
No 244
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.83 E-value=0.16 Score=65.04 Aligned_cols=202 Identities=10% Similarity=0.031 Sum_probs=119.1
Q ss_pred ceeeeeecCCCeEEEeeccCCC--ccEEEEecCCC-CeE-EeecCCCceEEEEccCCcEEEeeCCC--------------
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHG--SSIRRSCNNSQ-PEL-LFPATSPDGLTVDWVGRNLYWCDKGL-------------- 630 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~--~~I~r~~l~s~-~~~-l~~l~~p~gLAvD~~~~~LYwtD~~~-------------- 630 (1416)
..++++.+.+++|.++-..... ..|+.+.+.+. ... ...-....+++.-+-++.||++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 4578888888888776543221 16888888733 221 11222256677777778888875432
Q ss_pred -CeEEEeecCCCc-eEEEEcCC---CCCcceeeecCCcceEEEeeCCC---CceEEEEecCC------C--CCEEEeecC
Q psy6572 631 -DTIEVAKLDGRF-RKVLINKG---LQEPRGIALNPAYGYMYWTDWGQ---NAHIGKAKMDG------S--NPKVIISKN 694 (1416)
Q Consensus 631 -~~I~v~~ldG~~-~~vLi~~~---l~~P~gIavDp~~g~LYWtD~g~---~~~I~ra~mDG------s--~r~vlv~~~ 694 (1416)
.+|++.++.+.. ..+++... -....++++.|..++|+++-... ...|+..++++ . ..+.|.. .
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~ 285 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID-N 285 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC-S
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC-C
Confidence 358888887654 22333222 22346899999999998876421 35789998875 2 2344433 2
Q ss_pred CCCCeeEEeecCCCeEEEecCC---CCeEEEEeCCCCc---eEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCC--
Q psy6572 695 LSWPNALTISYETNELFWGDAH---EDYIAVSDLNGEN---IKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMK-- 765 (1416)
Q Consensus 695 l~~P~gLaiD~~~~rLYWtD~~---~~~I~~~~ldG~~---r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~-- 765 (1416)
... ....+.+..++||+.-.. ..+|..+++++.. .+.|+.... .....+++++ +++|+++-...+
T Consensus 286 ~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 286 FEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-----KDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp SSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-----SCEEEEEEEETTTEEEEEEEETTEE
T ss_pred CCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-----CCeEEEEEEEcCCEEEEEEEECCEE
Confidence 211 122455667888887432 4579999987654 255554320 1134456776 778887765443
Q ss_pred eeEEecccCCCc
Q psy6572 766 SIERCDKYTGKN 777 (1416)
Q Consensus 766 ~I~~~nk~tG~~ 777 (1416)
.|+.++..+|+.
T Consensus 360 ~l~~~~~~~g~~ 371 (710)
T 2xdw_A 360 TLQLHDLATGAL 371 (710)
T ss_dssp EEEEEETTTCCE
T ss_pred EEEEEECCCCCE
Confidence 466665445553
No 245
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.82 E-value=0.7 Score=51.84 Aligned_cols=228 Identities=6% Similarity=-0.081 Sum_probs=121.8
Q ss_pred CeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEEee-cCCCce
Q psy6572 540 PNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELLFP-ATSPDG 613 (1416)
Q Consensus 540 ~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l~~-l~~p~g 613 (1416)
.+|+.+. ...|+..++.... ..+......+.+|+|.+.++.|+..... +.|+..++.+ .. ..+.. ...+..
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~ 112 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVSSGKCLKTLKGHSNYVFC 112 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 3444332 3345555554333 2233334456788998877777665443 3677777773 22 22222 445667
Q ss_pred EEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC-EEEee
Q psy6572 614 LTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP-KVIIS 692 (1416)
Q Consensus 614 LAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r-~vlv~ 692 (1416)
+++.+.+..| .+-...+.|.+.++........+........+|++.|...+|+.+... ..|...++..... ..+..
T Consensus 113 ~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 113 CNFNPQSNLI-VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD--GLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp EEECSSSSEE-EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTCCEEEEECC
T ss_pred EEEcCCCCEE-EEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEECCCCceeeEEec
Confidence 8887755544 455556788888887544333333334456789999887777666533 3566666653332 22322
Q ss_pred cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccce--eEEEecCcEEEeecCCCeeEEe
Q psy6572 693 KNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVF--ALAVFEDHLFWTDWEMKSIERC 770 (1416)
Q Consensus 693 ~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~--~lav~~d~LYwtD~~~~~I~~~ 770 (1416)
........|++++....|+. -...+.|...++........+..... ..... .+...++.++.+-...+.|..-
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~sg~~dg~i~vw 264 (312)
T 4ery_A 190 DDNPPVSFVKFSPNGKYILA-ATLDNTLKLWDYSKGKCLKTYTGHKN----EKYCIFANFSVTGGKWIVSGSEDNLVYIW 264 (312)
T ss_dssp SSCCCEEEEEECTTSSEEEE-EETTTEEEEEETTTTEEEEEECSSCC----SSSCCCEEEECSSSCEEEECCTTSCEEEE
T ss_pred cCCCceEEEEECCCCCEEEE-EcCCCeEEEEECCCCcEEEEEEecCC----ceEEEEEEEEeCCCcEEEEECCCCEEEEE
Confidence 22333456888765544444 34456788888755443333332210 11111 1122345556666566666666
Q ss_pred cccCCCce
Q psy6572 771 DKYTGKNC 778 (1416)
Q Consensus 771 nk~tG~~~ 778 (1416)
+..++...
T Consensus 265 d~~~~~~~ 272 (312)
T 4ery_A 265 NLQTKEIV 272 (312)
T ss_dssp ETTTCCEE
T ss_pred ECCCchhh
Confidence 55555433
No 246
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.82 E-value=0.61 Score=53.22 Aligned_cols=201 Identities=14% Similarity=0.084 Sum_probs=116.8
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
..+.+|++.+....|+-.... +.|+..++.+.. ..+.. ...+..|++.+.+..| .+-...+.|.+.++.....
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l-~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLD---AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL-ATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETT---SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE-EEECTTSEEEEEETTTCSE
T ss_pred CCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE-EEEcCCCcEEEEEcCCCce
Confidence 446677777665544433332 367777776221 22222 4456678888765544 4556678898888876555
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVS 723 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~ 723 (1416)
...+........+|++.|...+|...... ..|...++........+.........|++.+.. +++.+-...+.|...
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAID--GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIY 233 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEE
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCC--CeEEEEECCCCcEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEE
Confidence 44444555567899999987777766533 356666665332222233233445789998644 444444556778888
Q ss_pred eCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 724 DLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 724 ~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
++........+.+. .....+|++. .+.++.+-...+.|..-+..++.....
T Consensus 234 d~~~~~~~~~~~~h------~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 234 DVQHANLAGTLSGH------ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp ETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ECCCcceeEEEcCC------CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 87655444444432 3345667764 455566666666666655555544333
No 247
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.80 E-value=0.52 Score=53.80 Aligned_cols=175 Identities=11% Similarity=0.009 Sum_probs=103.2
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEee--cCCCceEEEEccCC
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLFP--ATSPDGLTVDWVGR 621 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~~--l~~p~gLAvD~~~~ 621 (1416)
...|+..++.... ..+......+..++|.+..+.|+..... +.|....+.+.. ...+. ...+..|++.+.+.
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcCCCceeEEecCCCceEEEEEECCCCC
Confidence 4557766765544 2333334456778898877776655433 367777776322 22222 44567788887655
Q ss_pred cEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeE
Q psy6572 622 NLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNAL 701 (1416)
Q Consensus 622 ~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gL 701 (1416)
.|. +-...+.|.+.++........+.......+.|++.|...+|+.... ...|...++........+.........|
T Consensus 178 ~la-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 254 (321)
T 3ow8_A 178 YLA-SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD--DGYIKIYDVQHANLAGTLSGHASWVLNV 254 (321)
T ss_dssp EEE-EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT--TSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEE-EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC--CCeEEEEECCCcceeEEEcCCCCceEEE
Confidence 554 4455678888887654333233333445789999998766665543 2356666666544444444445556788
Q ss_pred EeecCCCeEEEecCCCCeEEEEeCCCC
Q psy6572 702 TISYETNELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 702 aiD~~~~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
++.+....| .+-...+.|...++...
T Consensus 255 ~~sp~~~~l-~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 255 AFCPDDTHF-VSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp EECTTSSEE-EEEETTSCEEEEETTTT
T ss_pred EECCCCCEE-EEEeCCCcEEEEeCCCC
Confidence 887644444 44444567777776543
No 248
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.80 E-value=0.00059 Score=73.07 Aligned_cols=60 Identities=23% Similarity=0.714 Sum_probs=40.2
Q ss_pred CCCCCCCCCcc--c-ccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccc
Q psy6572 441 CGDNSDEFSCF--V-NECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSH 506 (1416)
Q Consensus 441 C~dgsDe~~C~--i-~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq 506 (1416)
|..|.....|. + ++|...+++ |.+.|++++++|+|.|++||.|. .++++|.++.+ .+|.+
T Consensus 67 C~~Gf~G~~Ce~~i~deC~~~~~~--C~~~C~n~~gsy~C~C~~Gy~l~-~dG~~C~~~~~---~PC~~ 129 (195)
T 1nfu_B 67 CLEGFEGKNCELFTRKLCSLDNGD--CDQFCHEEQNSVVCSCARGYTLA-DNGKACIPTGP---YPCGK 129 (195)
T ss_dssp --------------CCGGGTGGGG--CSSEEEEETTEEEEECCTTEEEC-TTSSCEEESSS---SCTTC
T ss_pred CCCCceeccccccccccccCCCCC--CCCEeECCCCCeEEECCCCceeC-CCCCccccCCC---CCCCC
Confidence 44444445562 4 788765555 99999999999999999999998 78999998764 56654
No 249
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.79 E-value=0.021 Score=66.54 Aligned_cols=202 Identities=10% Similarity=0.073 Sum_probs=112.6
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCC-CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATS-PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV 645 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~-p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v 645 (1416)
+..+++.+.+++|+++........|+.+.+.+ ....+.. ... ..++++.+.++.|+++... ..|++.++++...+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCCcEE
Confidence 45667888888877764432224677777763 3233322 222 2236777778888777654 378999988766555
Q ss_pred EEcCCCC-Ccce------------------eeecCCcceEEEeeC---CCCceEEEEecCCCCCEEEeecCCCCCeeEEe
Q psy6572 646 LINKGLQ-EPRG------------------IALNPAYGYMYWTDW---GQNAHIGKAKMDGSNPKVIISKNLSWPNALTI 703 (1416)
Q Consensus 646 Li~~~l~-~P~g------------------IavDp~~g~LYWtD~---g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLai 703 (1416)
|...... .|.| +++.|...+|+++.. .....|.+.++++...+.+.. .......+++
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCcccccceE
Confidence 5432211 1221 233444444444431 234578888888765555543 3345567788
Q ss_pred ec-CCCeEEEecCC-C----CeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecC--C--CeeEEec
Q psy6572 704 SY-ETNELFWGDAH-E----DYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWE--M--KSIERCD 771 (1416)
Q Consensus 704 D~-~~~rLYWtD~~-~----~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~--~--~~I~~~n 771 (1416)
.+ ..++|+++... . ..|+.++++|...+.+.... ....+..+++. +.+|+++... . ..|+.++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA-----EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC-----TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC-----CCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 76 45667766432 2 47999999887655543311 01123445553 4456665332 2 2377776
Q ss_pred ccCCCc
Q psy6572 772 KYTGKN 777 (1416)
Q Consensus 772 k~tG~~ 777 (1416)
..+|..
T Consensus 271 ~~~g~~ 276 (396)
T 3c5m_A 271 PETLEN 276 (396)
T ss_dssp TTTCCE
T ss_pred CCCCCe
Confidence 655543
No 250
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.81 Score=51.88 Aligned_cols=204 Identities=10% Similarity=0.011 Sum_probs=116.2
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC-eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP-ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~-~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
...+.+|+|.+.++.|+..... +.|+...+. ... ..+.. ...+.+|++.+.+..| ++-...+.|.+.++....
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKD---SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYC-VTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESS---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTTEEEEEETTTCC
T ss_pred eceEEEEEEcCCCCEEEEEeCC---CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCc
Confidence 3456788888877666665443 367777766 222 22222 4556778887755444 455567889999987554
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCC---CCceEEEEecCCCC--CE----------EEee-cCCCCCeeEEeecC
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWG---QNAHIGKAKMDGSN--PK----------VIIS-KNLSWPNALTISYE 706 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g---~~~~I~ra~mDGs~--r~----------vlv~-~~l~~P~gLaiD~~ 706 (1416)
....+. ....+..|++.|...+|+.+... ....|...++.... .. .+.. ........+++.+.
T Consensus 108 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 108 CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 443333 44568899999988777776533 01345554444322 11 1111 11225678888875
Q ss_pred CCeEEEecCCCCeEEEEeCCC-CceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 707 TNELFWGDAHEDYIAVSDLNG-ENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 707 ~~rLYWtD~~~~~I~~~~ldG-~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
...|+.+. ..+.|...++.. ......+... .....+|++. .+.++++-...+.|...+..++.....+
T Consensus 187 ~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 187 GKYIIAGH-KDGKISKYDVSNNYEYVDSIDLH------EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp GCEEEEEE-TTSEEEEEETTTTTEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEc-CCCEEEEEECCCCcEeEEEEecC------CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 55555544 457888888765 3333233322 2344566664 4455555555666766666555544433
No 251
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.54 Score=54.60 Aligned_cols=200 Identities=6% Similarity=-0.090 Sum_probs=112.8
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEE
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV 645 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v 645 (1416)
.+..|+|.+.++.|+..... +.|+....++.. ..+.. ...+..|++.+.+..|+.+ ...+.|.+.++.......
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---GELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQ 185 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---SCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEE
Confidence 67889998877777665544 256666644322 22222 4556788888766656544 446778888876443332
Q ss_pred EEcCCCCC---------------cceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeE
Q psy6572 646 LINKGLQE---------------PRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNEL 710 (1416)
Q Consensus 646 Li~~~l~~---------------P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rL 710 (1416)
.+...... +..+++.+. +.|+... ....|...++........+.........|++.+....|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPG--PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EECCC---------------CCCBSCCEEEET-TEEEEEC--GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEc--CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 22222222 667777765 4444443 23467777776554444443334455788888755544
Q ss_pred EEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 711 FWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 711 YWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
+.+ ...+.|...++........+... -....+|++..+.++++-...+.|...+..++.....+
T Consensus 263 ~~~-~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 263 LSA-SDDGTLRIWHGGNGNSQNCFYGH------SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EEE-ETTSCEEEECSSSBSCSEEECCC------SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEE-cCCCEEEEEECCCCccceEecCC------CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEec
Confidence 444 45567877776543333333322 23456677754436666666677776665555443333
No 252
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.74 E-value=0.001 Score=65.09 Aligned_cols=43 Identities=28% Similarity=0.750 Sum_probs=37.1
Q ss_pred ccccCCCCCCcccccceecCCceEEeeCCCceecCCCCCccccCCc
Q psy6572 453 NECNVSHGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNE 498 (1416)
Q Consensus 453 ~eC~~~~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didE 498 (1416)
++|...+++ |++.|++++++|+|.|++||.|. .++++|+++.+
T Consensus 55 ~~C~~~~~~--C~~~C~n~~g~y~C~C~~G~~~~-~~g~~C~~~~~ 97 (114)
T 1aut_L 55 LNCSLDNGG--CTHYCLEEVGWRRCSCAPGYKLG-DDLLQCHPAVK 97 (114)
T ss_dssp SSSSSGGGG--CSSEEEECSSSEEEECCTTEEEC-TTSSCEEECSS
T ss_pred CcCcCCCCC--CCCEeECCCCCEEeECCCCeeEC-CCCCccCcCcc
Confidence 468655566 99999999999999999999998 78899988765
No 253
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.74 E-value=0.0008 Score=61.72 Aligned_cols=43 Identities=44% Similarity=0.858 Sum_probs=37.0
Q ss_pred ccccCCcCC-CCCccc-eeeecCCeeeecCCCCcEEecCCCceEecC
Q psy6572 492 LCVDTNECL-DRPCSH-YCRNTLGSYSCSCAPGYALLSDKHGCKATS 536 (1416)
Q Consensus 492 tC~didEC~-~~~Csq-~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~ 536 (1416)
+|++||||+ ..+|.+ .|+|+.++|+|.|++||+| +++.|..++
T Consensus 1 sC~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~did 45 (82)
T 1emn_A 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTD 45 (82)
T ss_dssp CCCCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECC
T ss_pred CCCccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcc
Confidence 588999998 588976 8999999999999999998 567887654
No 254
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.71 E-value=0.11 Score=59.46 Aligned_cols=165 Identities=10% Similarity=-0.067 Sum_probs=98.5
Q ss_pred cEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccC--CCccEEEEecC-CCCeEEeecCCCceEEEEccCCcE
Q psy6572 547 KYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTM--HGSSIRRSCNN-SQPELLFPATSPDGLTVDWVGRNL 623 (1416)
Q Consensus 547 ~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~--~~~~I~r~~l~-s~~~~l~~l~~p~gLAvD~~~~~L 623 (1416)
...|+.+++.+.....+ ..+..+.+.+.+++|+++.... ....|+++.+. +....+.....+.++++.+-++.|
T Consensus 42 ~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l 118 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKL 118 (347)
T ss_dssp EEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEE
T ss_pred cceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEE
Confidence 34577777776552222 4566788888888888876532 22358888777 333444432226677777777788
Q ss_pred EEeeCC--------------------------CCeEEEeecCCCce-EEEEcCCCCCcceeeecCCcceEEEeeCCC---
Q psy6572 624 YWCDKG--------------------------LDTIEVAKLDGRFR-KVLINKGLQEPRGIALNPAYGYMYWTDWGQ--- 673 (1416)
Q Consensus 624 YwtD~~--------------------------~~~I~v~~ldG~~~-~vLi~~~l~~P~gIavDp~~g~LYWtD~g~--- 673 (1416)
+++... ..+|++.++.+... +.|.. . ....+++.|.. .+|.+....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~ 194 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIP 194 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSC
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccc
Confidence 887521 35788888877655 55543 2 67788898876 666654321
Q ss_pred ----CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCC-------CCeEEEEe
Q psy6572 674 ----NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAH-------EDYIAVSD 724 (1416)
Q Consensus 674 ----~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~-------~~~I~~~~ 724 (1416)
...|++++ .|. .+.|... .... .+.+...+|+++... ...|+.++
T Consensus 195 ~~~~~~~l~~~d-~~~-~~~l~~~--~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 195 QYFKFWDIYIWE-DGK-EEKMFEK--VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CSSCCEEEEEEE-TTE-EEEEEEE--ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccEEEeC-CCc-eEEeccC--ccee--eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 34677777 333 3333332 2222 235556677776432 34788777
No 255
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.70 E-value=0.2 Score=59.73 Aligned_cols=199 Identities=10% Similarity=0.029 Sum_probs=122.5
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCC----------C--CeEEee-cCCCceEEEEccCCcEEEeeCCCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS----------Q--PELLFP-ATSPDGLTVDWVGRNLYWCDKGLD 631 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s----------~--~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~ 631 (1416)
....+..|+|.+.++.++.+-... +.|+.+.+.. . ...+.. ...+.+|++.+.+..++++-...+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~d--g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPS--SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSS--SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred CCCcEEEEEECCCCCcEEEEECCC--CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 345677788887655565554443 3566666542 1 112222 456788888887776777777788
Q ss_pred eEEEeecCCCc---e----EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC---CEEEeecCCCCCeeE
Q psy6572 632 TIEVAKLDGRF---R----KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN---PKVIISKNLSWPNAL 701 (1416)
Q Consensus 632 ~I~v~~ldG~~---~----~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~---r~vlv~~~l~~P~gL 701 (1416)
.|.+.++.... . ...+......+..|++.|..+.+|.+.... ..|...++.... ....+...-..++.|
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-QKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-CeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 99999987521 1 112223345678999999778888776433 467777776442 222233344567899
Q ss_pred EeecCCCeEEEecCCCCeEEEEeCCC-Cc-eEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEeccc
Q psy6572 702 TISYETNELFWGDAHEDYIAVSDLNG-EN-IKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 702 aiD~~~~rLYWtD~~~~~I~~~~ldG-~~-r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~ 773 (1416)
++.+....||++-...+.|...++.. .. ...+. .. .....+|++. +.+|+.+-...+.|...+..
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SH------KDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CC------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cC------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 99887777888777778888888764 22 23332 21 2345666764 34677777666666555443
No 256
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.62 E-value=0.0013 Score=67.06 Aligned_cols=55 Identities=27% Similarity=0.544 Sum_probs=41.7
Q ss_pred CCCCCCCCCcc--cccc---cCCCCCCcccccceecCC-ceEEeeCCCceecCCCCCccccCCc
Q psy6572 441 CGDNSDEFSCF--VNEC---NVSHGGQLCAHECIDLKI-GYKCACRKGYQVHPEDKHLCVDTNE 498 (1416)
Q Consensus 441 C~dgsDe~~C~--i~eC---~~~~~~~~Cs~~C~nt~~-gy~C~C~~Gy~L~p~d~~tC~didE 498 (1416)
|..|.....|. +++| ...+++ |+|.|+++++ +|+|.|++||.|. .++++|+++++
T Consensus 72 C~~G~~G~~C~~~~~~c~~c~~~~~~--C~~~C~~~~g~~y~C~C~~Gy~l~-~dG~~C~~~~e 132 (142)
T 2c4f_L 72 CLPAFEGRNCETHKDDQLICVNENGG--CEQYCSDHTGTKRSCRCHEGYSLL-ADGVSCTPTVE 132 (142)
T ss_dssp CCTTEESTTSCEEGGGCCSTTTGGGG--CSSEEECCTTSCCEEECCTTEEEC-TTSSCEEESSS
T ss_pred CCCCccCCccccCccccccccCCCCC--ccCEeECCCCCCEEEECCCCceEC-CCCCCCCCCCc
Confidence 44444444562 3553 334455 9999999999 9999999999998 78999999988
No 257
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.61 E-value=0.26 Score=57.23 Aligned_cols=211 Identities=8% Similarity=-0.104 Sum_probs=119.3
Q ss_pred ecEEEEEEecCCcc---eE---EecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCceEEE
Q psy6572 546 NKYYIREVTQAGVM---TI---RIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDGLTV 616 (1416)
Q Consensus 546 ~~~~I~~i~l~g~~---~~---~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~gLAv 616 (1416)
....|+..++.... .+ .......+.+|+|.+.++.|+-.... +.|+..++.+.. .++.. ...+..|++
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLAQQVVLSSYRAHAAQVTCVAA 177 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCcCCceEEEEe
Confidence 34456665655433 11 11233457789998877776655443 368777777322 22222 456678888
Q ss_pred EccCCcEEEeeCCCCeEEEeecCCCc-eEEEEc-CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC
Q psy6572 617 DWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLIN-KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN 694 (1416)
Q Consensus 617 D~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~-~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~ 694 (1416)
.+.+..++.+-...++|.+.++.... ...+.. .....+..|++.|..+.|+.+-.. ...|...++........+...
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~-dg~v~~wd~~~~~~~~~~~~h 256 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE-NGTVSLVDTKSTSCVLSSAVH 256 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET-TSEEEEEESCC--CCEEEECC
T ss_pred cCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc-CCcEEEEECCCCcEEEEEcCC
Confidence 88888888888888889998876433 333322 233457889999988887776422 235666666543332223333
Q ss_pred CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCee
Q psy6572 695 LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSI 767 (1416)
Q Consensus 695 l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I 767 (1416)
....+.|++.+...+++.+-...+.|...++.......+ .++ -....+|++. +.+|+.|-...++|
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~~H------~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-QAH------RDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-CCC------SSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-cCC------CCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 445578888765555554444456677777654432221 111 2234566663 34566554444444
No 258
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.61 E-value=0.49 Score=58.16 Aligned_cols=217 Identities=11% Similarity=0.113 Sum_probs=128.7
Q ss_pred EEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cCCCceEEEEccCCcEE
Q psy6572 548 YYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-ATSPDGLTVDWVGRNLY 624 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~~p~gLAvD~~~~~LY 624 (1416)
..|+..++.+.. ..+......+.+++|.+....|...... +.|.....++. ...+.. ...+.+|++.+.+..|.
T Consensus 325 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 325 KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 446655665554 2333334456788998877776655433 35666665532 222322 45677899988666665
Q ss_pred EeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEee
Q psy6572 625 WCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTIS 704 (1416)
Q Consensus 625 wtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD 704 (1416)
.. ...+.|.+.++++....++.. .-....+|++.|...+|..+... ..|...+++|.....+. ..-.....|++.
T Consensus 402 ~~-~~d~~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d--~~v~~w~~~~~~~~~~~-~~~~~v~~~~~s 476 (577)
T 2ymu_A 402 SA-SDDKTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDDQTIASASDD--KTVKLWNRNGQLLQTLT-GHSSSVRGVAFS 476 (577)
T ss_dssp EE-ETTSEEEEECTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETT--SEEEEEETTSCEEEEEE-CCSSCEEEEEEC
T ss_pred EE-eCCCEEEEEeCCCCEEEEecC-CCCCeEEEEECCCCCEEEEEcCC--CEEEEEECCCCEEEEEc-CCCCCEEEEEEc
Confidence 44 445788888888877666653 33456789999987777665532 35666667765444333 233445788998
Q ss_pred cCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 705 YETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 705 ~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
+....|. +-...+.|...+.+|...+.+.. . .....+|++. .+.++.+-...+.|..-+ .+|....++
T Consensus 477 pd~~~la-s~~~d~~i~iw~~~~~~~~~~~~-h------~~~v~~l~~s~dg~~l~s~~~dg~v~lwd-~~~~~~~~~ 545 (577)
T 2ymu_A 477 PDGQTIA-SASDDKTVKLWNRNGQLLQTLTG-H------SSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTL 545 (577)
T ss_dssp TTSCEEE-EEETTSEEEEEETTSCEEEEEEC-C------SSCEEEEEECTTSSCEEEEETTSEEEEEC-TTSCEEEEE
T ss_pred CCCCEEE-EEeCCCEEEEEcCCCCEEEEEeC-C------CCCEEEEEEcCCCCEEEEEECcCEEEEEe-CCCCEEEEE
Confidence 6544444 43445678888888876665543 1 2345567764 344445544555665555 355444433
No 259
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.60 E-value=0.0012 Score=68.40 Aligned_cols=50 Identities=44% Similarity=0.998 Sum_probs=42.9
Q ss_pred CCceecCCCCCccccCCcCC---CCCccceeeecCCeeeecCCCCcEEecCCCceEe
Q psy6572 481 KGYQVHPEDKHLCVDTNECL---DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 481 ~Gy~L~p~d~~tC~didEC~---~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
.||++. .++.+++||. ..+|+|.|.|++|+|+|.|.+||.|..++++|++
T Consensus 106 ~GF~~~----y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 106 TGFAAY----YVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CEEEEE----EEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ccceee----eecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 577664 3577899997 2579999999999999999999999999999975
No 260
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.59 E-value=0.49 Score=58.13 Aligned_cols=218 Identities=11% Similarity=0.106 Sum_probs=127.9
Q ss_pred cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCCCceEEEEccCCcE
Q psy6572 547 KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATSPDGLTVDWVGRNL 623 (1416)
Q Consensus 547 ~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~p~gLAvD~~~~~L 623 (1416)
...|+..+..+.. ..+......+.+|+|.+....|+..... +.|+..++++ ....+.. ...+.+|++.+.+..|
T Consensus 283 d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 283 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD---KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp TSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 3445555655554 3333334556788998877766654333 3677776663 2233332 4556788888766655
Q ss_pred EEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEe
Q psy6572 624 YWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTI 703 (1416)
Q Consensus 624 YwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLai 703 (1416)
.. -...+.|.+.++++.....+. .....+++|++.|...+|...... ..|...+++|.....+. ..-....+|++
T Consensus 360 ~~-~~~dg~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d--~~v~~~~~~~~~~~~~~-~~~~~v~~~~~ 434 (577)
T 2ymu_A 360 AS-ASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDD--KTVKLWNRNGQLLQTLT-GHSSSVWGVAF 434 (577)
T ss_dssp EE-EETTSEEEEEETTCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETT--SEEEEECTTCCEEEEEE-CCSSCEEEEEE
T ss_pred EE-EeCCCEEEEEcCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCC--CEEEEEeCCCCEEEEec-CCCCCeEEEEE
Confidence 54 445578888888887666655 334567899999987777665532 35666666665433332 22334567888
Q ss_pred ecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 704 SYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 704 D~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
.+...+|..+ ...+.|...+++|...+.+... -....+|++. .+.++.+-...+.|..-+ .+|.....+
T Consensus 435 s~d~~~l~~~-~~d~~v~~w~~~~~~~~~~~~~-------~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~ 504 (577)
T 2ymu_A 435 SPDDQTIASA-SDDKTVKLWNRNGQLLQTLTGH-------SSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTL 504 (577)
T ss_dssp CTTSSEEEEE-ETTSEEEEEETTSCEEEEEECC-------SSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEE
T ss_pred CCCCCEEEEE-cCCCEEEEEECCCCEEEEEcCC-------CCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEE
Confidence 7655555443 3456777778887766555432 2334566664 445555555555555544 345443333
No 261
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.58 E-value=0.096 Score=61.03 Aligned_cols=194 Identities=8% Similarity=-0.071 Sum_probs=112.5
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-e-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-E-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF- 642 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~- 642 (1416)
..+.+|+|.+.++.|+..... +.|+...+.+.. . .+.. ...+..|++.+.++.++.+-...++|.+.++....
T Consensus 140 ~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKD---FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 456789998877776655443 367777776322 1 2222 45677888888777788888778889888875433
Q ss_pred eEEEE-cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 643 RKVLI-NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 643 ~~vLi-~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
...+. ......+..|++.|..+.++.+-.. ...|...++........+.......+.|++.+..+++..+-...+.|.
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~-d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDE-TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEES-SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeec-ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 22221 1233457889999988877765322 235666666543332233333344578888765555544444456777
Q ss_pred EEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEec
Q psy6572 722 VSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 722 ~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~n 771 (1416)
..++.......++ +. -....+|++. ++.++.|-...+.|..-+
T Consensus 296 iwd~~~~~~~~~~-~H------~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 296 VLDADFSEVFRDL-SH------RDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EECTTSCEEEEEC-CC------SSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEECCCCcEeEEC-CC------CCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 7777644322221 11 2234667763 466666665555554433
No 262
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.58 E-value=0.0011 Score=87.45 Aligned_cols=53 Identities=40% Similarity=0.811 Sum_probs=42.7
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCceeecCCceeCCCcccCCCCCCCCCCCCCCCCC
Q psy6572 46 SSHTCNNINDCGDGSDEADCSTCGNDTFHCDMGMCIHKALRCDVDPDCPDASDEMHCPM 104 (1416)
Q Consensus 46 ~~~~Cdg~~dC~d~sDE~~C~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~ 104 (1416)
....|+....|... +..| . ++|+|.+|+||+..|+|||++||.|+|||.+|+.
T Consensus 102 e~~~C~~~~~Cp~~--~~~C---~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~~ 154 (913)
T 3t5o_A 102 AFQPCIPSKLCKIE--EADC---K-NKFRCDSGRCIARKLECNGENDCGDNSDERDCGR 154 (913)
T ss_dssp CCEECCCSSSSCCC--CCCC---S-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCSS
T ss_pred cccccCCccCCCcc--ccCc---c-cccccCCCceEccceecCCcccCCCccccccCCC
Confidence 45677765667532 2244 3 7899999999999999999999999999999984
No 263
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.57 E-value=0.27 Score=60.75 Aligned_cols=237 Identities=11% Similarity=-0.013 Sum_probs=131.5
Q ss_pred eEecCCCCCeEEEEecEEEEEEecCCc----c--eEEeccccc-ceeeeeec--CCCeEEEeeccCCCccEEEEecC-C-
Q psy6572 532 CKATSDVPPNLLFTNKYYIREVTQAGV----M--TIRIHNQTN-AVGLDFDW--VDNCLYWSDVTMHGSSIRRSCNN-S- 600 (1416)
Q Consensus 532 C~a~~~~~~~li~s~~~~I~~i~l~g~----~--~~~~~~l~~-~~~l~~D~--~~~~LYwtD~~~~~~~I~r~~l~-s- 600 (1416)
+.+..+...+|+++....|+..++... . ..+...... +.+|+|.+ ..+.|+..... +.|+...+. .
T Consensus 23 ~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~~~~~~ 99 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWGWTFDK 99 (615)
T ss_dssp CCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEEEEEEG
T ss_pred EEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC---CEEEEEeCCCCc
Confidence 334434455666666667777776644 3 333333445 78999998 77766665543 366666664 2
Q ss_pred -----CCeEEee----cCCCceEEEEccCCcEEEeeCCC---CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEE
Q psy6572 601 -----QPELLFP----ATSPDGLTVDWVGRNLYWCDKGL---DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYW 668 (1416)
Q Consensus 601 -----~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~---~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYW 668 (1416)
..+.+.. ...+..|++.+.+..|+.+.... ..|.+.+ .+..... +.........|++.|...+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 100 ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGE-VSGHSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEE-CCSCSSCEEEEEECSSSSCEEE
T ss_pred ccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCccee-eecCCccEEEEEECCCCCcEEE
Confidence 1222222 45677889988888777766543 3566555 2332222 2344556788999998774444
Q ss_pred eeCCCCceEEEEecCCCCCEEEeecCCC---CCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEE-e---ccCCCC
Q psy6572 669 TDWGQNAHIGKAKMDGSNPKVIISKNLS---WPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIV-S---RRMDPT 741 (1416)
Q Consensus 669 tD~g~~~~I~ra~mDGs~r~vlv~~~l~---~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~-~---~~~~p~ 741 (1416)
+-.. ...|...++........+..... ....|++.+.+++++++-...+.|...++........+ . ..
T Consensus 178 ~~~~-d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---- 252 (615)
T 1pgu_A 178 TVGD-DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV---- 252 (615)
T ss_dssp EEET-TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC----
T ss_pred EEeC-CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccccc----
Confidence 4322 23555555443322222222233 46788998762444444445678888886543333222 2 11
Q ss_pred cccccceeEEEecCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 742 INLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 742 ~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
.....+|++..+.++++-...+.|...+..++.....
T Consensus 253 --~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 253 --QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp --CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred --CCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 2334566665555666666666776666555544333
No 264
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.99 Score=49.94 Aligned_cols=216 Identities=11% Similarity=0.035 Sum_probs=115.3
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC--CCCeEEee----cCCCceEEEEc
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN--SQPELLFP----ATSPDGLTVDW 618 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~--s~~~~l~~----l~~p~gLAvD~ 618 (1416)
...|+..++.... ..+......+.+|+|.+.++.|+..... +.|....+. ...+.+.. ...+..|+++
T Consensus 38 dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 113 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ- 113 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE-
T ss_pred CCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCCcccchhhcccCEEEEEec-
Confidence 3456666665544 3333445667889999988777776554 366666665 22222222 3344555553
Q ss_pred cCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecC-CcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCC
Q psy6572 619 VGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNP-AYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSW 697 (1416)
Q Consensus 619 ~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp-~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~ 697 (1416)
+.++++-...+.|.+.+ .+.....+. ........+++.| ...+|+..... ..|...+ .+.....+....-..
T Consensus 114 --~~~l~~~~~d~~i~~~d-~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~i~d-~~~~~~~~~~~~~~~ 186 (313)
T 3odt_A 114 --DGVVISGSWDKTAKVWK-EGSLVYNLQ-AHNASVWDAKVVSFSENKFLTASAD--KTIKLWQ-NDKVIKTFSGIHNDV 186 (313)
T ss_dssp --TTEEEEEETTSEEEEEE-TTEEEEEEE-CCSSCEEEEEEEETTTTEEEEEETT--SCEEEEE-TTEEEEEECSSCSSC
T ss_pred --CCEEEEEeCCCCEEEEc-CCcEEEecc-cCCCceeEEEEccCCCCEEEEEECC--CCEEEEe-cCceEEEEeccCccc
Confidence 45556666677888887 333333332 3445567788877 44444444322 2444444 111111111113344
Q ss_pred CeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCc
Q psy6572 698 PNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKN 777 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~ 777 (1416)
...|++.+ .++ +++-...+.|...++........+... .....+|++..+..+++-...+.|...+..++..
T Consensus 187 i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 187 VRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGH------ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp EEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECTTSCEEEEETTSEEEEECTTTCCE
T ss_pred EEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcC------CceEEEEEEecCCCEEEEecCCEEEEEECCCCce
Confidence 56788865 445 444455678888887643333333322 3345677775443455555667777766666654
Q ss_pred eEEE
Q psy6572 778 CTSV 781 (1416)
Q Consensus 778 ~~~l 781 (1416)
...+
T Consensus 259 ~~~~ 262 (313)
T 3odt_A 259 KQVI 262 (313)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4444
No 265
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.53 E-value=0.51 Score=55.31 Aligned_cols=201 Identities=6% Similarity=-0.091 Sum_probs=119.8
Q ss_pred cccceeeeeec-CCCeEEEeeccCCCccEEEEecC-CC--------CeEEee-cCCCceEEEEccCCcEEEeeCCCCeEE
Q psy6572 566 QTNAVGLDFDW-VDNCLYWSDVTMHGSSIRRSCNN-SQ--------PELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIE 634 (1416)
Q Consensus 566 l~~~~~l~~D~-~~~~LYwtD~~~~~~~I~r~~l~-s~--------~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~ 634 (1416)
...+.+|+|.+ ..+.|+..... +.|+...+. .. ...+.. ...+..|++.+.+.+++++-...+.|.
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~d---g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSED---CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETT---SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCC---CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 44577899988 44555444333 367777776 21 122222 556778888887777888877788999
Q ss_pred EeecCCCceEEEE--cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEe-ecC-CCCCeeEEeecCCCeE
Q psy6572 635 VAKLDGRFRKVLI--NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVII-SKN-LSWPNALTISYETNEL 710 (1416)
Q Consensus 635 v~~ldG~~~~vLi--~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv-~~~-l~~P~gLaiD~~~~rL 710 (1416)
+.++........+ .........|++.|...+|+.+... ..|...++........+ ... -..+..+++.+ ++++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKI 234 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--SEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--CcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcE
Confidence 9998755443333 3345567899999976667666532 36777776543332222 222 22367788875 4555
Q ss_pred EEec---CCCCeEEEEeCCCCce-EEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCCCc
Q psy6572 711 FWGD---AHEDYIAVSDLNGENI-KIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTGKN 777 (1416)
Q Consensus 711 YWtD---~~~~~I~~~~ldG~~r-~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG~~ 777 (1416)
+.+- ...+.|...++..... ..+.... ....+..+++. +.+||++-...+.|...+..++..
T Consensus 235 l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 235 LTTGFSRMSERQVALWDTKHLEEPLSLQELD-----TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEECTTCCEEEEEEETTBCSSCSEEEECC-----CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEEeccCCCCceEEEEcCccccCCceEEecc-----CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 5554 4567788888754332 2222211 02335566664 446777766667777666555553
No 266
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.45 E-value=0.32 Score=56.43 Aligned_cols=201 Identities=9% Similarity=0.005 Sum_probs=124.9
Q ss_pred ccceeeeeecCC-CeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVD-NCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~-~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+.+|+|.+.+ +.|+..... +.|+...+. .....+.. ...+.+|++.+..++++++-...+.|.+.++.+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKG---GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBT---SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCEEEEEECCCCCCEEEEEcCC---CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 456788888876 444444333 378877777 33333332 345667777775566777777778999999998
Q ss_pred CceEEEEcCC--CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 641 RFRKVLINKG--LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 641 ~~~~vLi~~~--l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
.....+.... ......|++.|...+|+..... ..|...++.|.....+. ........|++.+....++++-...+
T Consensus 151 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 151 SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST--GRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT--SEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CceEEEeccCCCCCCeEEEEECCCCCEEEEECCC--CCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 6666555432 2457899999987777766533 46777777655333332 33456688999876553666655667
Q ss_pred eEEEEeCCC-----CceEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 719 YIAVSDLNG-----ENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 719 ~I~~~~ldG-----~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
.|...++.. .-...+ .. .....+|++. .+.++++-...+.|...+..++.....+
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~--~~------~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEM--PH------EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEE--EC------SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEEEEeCCCCCcccceEEEe--cC------CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 888888653 222222 11 3345667774 3555566556677777666666544443
No 267
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.44 E-value=0.063 Score=66.88 Aligned_cols=172 Identities=12% Similarity=-0.043 Sum_probs=106.0
Q ss_pred EEEEEec--CCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCCCceEEEEccCCcEEE
Q psy6572 549 YIREVTQ--AGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATSPDGLTVDWVGRNLYW 625 (1416)
Q Consensus 549 ~I~~i~l--~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~p~gLAvD~~~~~LYw 625 (1416)
.|+.+++ .+... .+........+++.+..+.++++....+ .+..+.+. +..+.+..... ..+++++-++.|++
T Consensus 91 ~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~--~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~ 166 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATED--RVALYALDGGGLRELARLPG-FGFVSDIRGDLIAG 166 (582)
T ss_dssp EEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSS--CEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEE
T ss_pred EEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCC--CceEEEccCCcEEEeecCCC-ceEEECCCCCEEEE
Confidence 5777777 55543 2222222334566666666666544432 33444555 33344444222 78999999999987
Q ss_pred eeCC---CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEE
Q psy6572 626 CDKG---LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALT 702 (1416)
Q Consensus 626 tD~~---~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLa 702 (1416)
+... ...|++.++++...+.|. .......++++.|...+||.++......|++.++++...+ ++...-..+.+++
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred EEEcCCCCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 6542 256999998876666554 3334568899999988899666544458999999987766 4443333344455
Q ss_pred --------eecCCCeEEEecCCCCeEEEEeCCCC
Q psy6572 703 --------ISYETNELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 703 --------iD~~~~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
+.+.. +||++-...+.+....+ |+
T Consensus 245 ~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 245 PTAITWLGYLPDG-RLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp CSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE
T ss_pred hccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC
Confidence 77544 77776655566666666 53
No 268
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.44 E-value=1.2 Score=52.69 Aligned_cols=238 Identities=8% Similarity=-0.029 Sum_probs=124.0
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEe
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLF 606 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~ 606 (1416)
+.+..+...+|+.+. ...|+..++.... ..+......+.+|+|.+.++.|.-.... +.|+..++.+.. .++.
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~~~~~~~~~~ 189 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQGFECIRTMH 189 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETTSSCEEECCC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeEEEc
Confidence 344333333444332 3456666665443 3333334567789998866655544333 356666665221 1222
Q ss_pred e-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 607 P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 607 ~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
. ...+..|++.+.+. ++++-...+.|.+.++........+.......+.+++.|...+|+-.... ..|...++...
T Consensus 190 ~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D--~~v~vwd~~~~ 266 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND--QTVRVWVVATK 266 (410)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTC
T ss_pred CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC--CeEEEEECCCC
Confidence 2 44567788887554 44566667889998886544333333444567788888875555444322 24555555443
Q ss_pred CCEEEeecCCCCCeeEEeecCC-------------------CeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCccccc
Q psy6572 686 NPKVIISKNLSWPNALTISYET-------------------NELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHH 746 (1416)
Q Consensus 686 ~r~vlv~~~l~~P~gLaiD~~~-------------------~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~ 746 (1416)
.....+...-.....|++.+.. +.++++-...+.|...++........+.+. -..
T Consensus 267 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h------~~~ 340 (410)
T 1vyh_C 267 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH------DNW 340 (410)
T ss_dssp CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC------SSC
T ss_pred ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC------CCc
Confidence 3333232223334556665421 345555555667777776543332223322 223
Q ss_pred ceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 747 VFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 747 P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
..+|++. .+.++++-...+.|..-+..++....++
T Consensus 341 v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 4566664 3455556556666666665555544444
No 269
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.41 E-value=0.0014 Score=86.61 Aligned_cols=36 Identities=47% Similarity=1.208 Sum_probs=33.0
Q ss_pred CCCCCCcccCCCceecCceeecCCCCCCCCCCCCCCCCCCCC
Q psy6572 159 NCSGDKFLCRNGNCILSRWRCDGDNDCNDGNDGLSSDEMNCD 200 (1416)
Q Consensus 159 ~C~~~~f~C~~g~CI~~~~~CDg~~DC~Dg~d~~~sDE~~C~ 200 (1416)
.|. ++|+|.+|+||+.+|+|||++||+|+ |||.+|+
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~-----sde~~C~ 153 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDN-----SDERDCG 153 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSS-----GGGTTCS
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCc-----cccccCC
Confidence 454 67999999999999999999999999 9999995
No 270
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.40 E-value=0.51 Score=55.29 Aligned_cols=186 Identities=6% Similarity=-0.134 Sum_probs=110.1
Q ss_pred EecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEEe-e--cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 562 RIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELLF-P--ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 562 ~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l~-~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
+......+..|+|.+.++.++++-... +.|+..++.+ .. ..+. . ...+..|++.+.+..| ++-...+.|.+.
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw 203 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCD--NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI-CTSCRDKRVRVI 203 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETT--SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCC--CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE-EEEecCCcEEEE
Confidence 333445678899988875555554442 3788877773 22 2221 2 4456778888755444 455566889999
Q ss_pred ecCCCce-EEE-EcCCCCCcceeeecCCcceEEEeeC-CCCceEEEEecCCCCC--EEEeecCCCCCeeEEeecCCCeEE
Q psy6572 637 KLDGRFR-KVL-INKGLQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKMDGSNP--KVIISKNLSWPNALTISYETNELF 711 (1416)
Q Consensus 637 ~ldG~~~-~vL-i~~~l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~mDGs~r--~vlv~~~l~~P~gLaiD~~~~rLY 711 (1416)
++..... ..+ .......+..+++.|...+|+..-. .....|...++..... .++..........+++++....||
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 204 EPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp ETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEE
T ss_pred eCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEE
Confidence 9875443 333 2223334788999987555544310 2234677777765443 222223345578899998888898
Q ss_pred EecCCCCeEEEEeCCCCc--eEEEEeccCCCCcccccceeEEEecC
Q psy6572 712 WGDAHEDYIAVSDLNGEN--IKIIVSRRMDPTINLHHVFALAVFED 755 (1416)
Q Consensus 712 WtD~~~~~I~~~~ldG~~--r~~v~~~~~~p~~~l~~P~~lav~~d 755 (1416)
++-...+.|...++.... ...+.... .-....+|++..+
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~-----~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFS-----SKESQRGMGYMPK 324 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEEC-----CSSCCSEEEECCG
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccc-----cCCcccceEEecc
Confidence 887667888888876544 33333211 0234567777544
No 271
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.38 E-value=0.35 Score=54.62 Aligned_cols=211 Identities=9% Similarity=0.100 Sum_probs=116.1
Q ss_pred CeEEEEecEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee--cCCCceEE
Q psy6572 540 PNLLFTNKYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP--ATSPDGLT 615 (1416)
Q Consensus 540 ~~li~s~~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~--l~~p~gLA 615 (1416)
..|+++... |..++..|.. ...... .....+.+. .+.||+.... +.|+++...+....... ......++
T Consensus 71 g~l~v~t~~-l~~~d~~g~~~~~~~~~~-~~~~~~~~~--~~~l~v~t~~---~~l~~~d~~g~~~~~~~~~~~~~~~~~ 143 (330)
T 3hxj_A 71 GTIYFGSDK-VYAINPDGTEKWRFDTKK-AIVSDFTIF--EDILYVTSMD---GHLYAINTDGTEKWRFKTKKAIYATPI 143 (330)
T ss_dssp TEECCSSCE-EEEECCCGGGGGGSCC------CCEEEE--TTEEEEECTT---SEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred CcEEEecCc-EEEECCCCcEEEEEECCC-CcccCceEE--CCEEEEEecC---CEEEEEcCCCCEEEEEcCCCceeeeeE
Confidence 345555555 7777765543 111110 111122232 6777765433 36777766522111111 23345667
Q ss_pred EEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCC
Q psy6572 616 VDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNL 695 (1416)
Q Consensus 616 vD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l 695 (1416)
+|. .++||+.. ..+.|.+.+.+|.....+. ........+++|+. |.||++. ..|.+.+.+|.....+. ...
T Consensus 144 ~~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~~-~~~~~~~~~~~d~~-g~l~v~t----~~l~~~d~~g~~~~~~~-~~~ 214 (330)
T 3hxj_A 144 VSE-DGTIYVGS-NDNYLYAINPDGTEKWRFK-TNDAITSAASIGKD-GTIYFGS----DKVYAINPDGTEKWNFY-AGY 214 (330)
T ss_dssp ECT-TSCEEEEC-TTSEEEEECTTSCEEEEEE-CSSCCCSCCEECTT-CCEEEES----SSEEEECTTSCEEEEEC-CSS
T ss_pred EcC-CCEEEEEc-CCCEEEEECCCCCEeEEEe-cCCCceeeeEEcCC-CEEEEEe----CEEEEECCCCcEEEEEc-cCC
Confidence 764 56677654 3468888888865443332 23344667788754 7788876 36777775554332222 222
Q ss_pred CCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccC
Q psy6572 696 SWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYT 774 (1416)
Q Consensus 696 ~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~t 774 (1416)
..+.++++|. +++||++.. .+.|..++.+|.....+.... ..+.++.+. ++.||++.. .+.|+++++ +
T Consensus 215 ~~~~~~~~~~-~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~g~l~v~t~-~ggl~~~d~-~ 283 (330)
T 3hxj_A 215 WTVTRPAISE-DGTIYVTSL-DGHLYAINPDGTEKWRFKTGK-------RIESSPVIGNTDTIYFGSY-DGHLYAINP-D 283 (330)
T ss_dssp CCCSCCEECT-TSCEEEEET-TTEEEEECTTSCEEEEEECSS-------CCCSCCEECTTSCEEEECT-TCEEEEECT-T
T ss_pred cceeceEECC-CCeEEEEcC-CCeEEEECCCCCEeEEeeCCC-------CccccceEcCCCeEEEecC-CCCEEEECC-C
Confidence 4467888874 568888754 467888887776654443221 123345565 677777654 457888875 5
Q ss_pred CCc
Q psy6572 775 GKN 777 (1416)
Q Consensus 775 G~~ 777 (1416)
|..
T Consensus 284 g~~ 286 (330)
T 3hxj_A 284 GTE 286 (330)
T ss_dssp SCE
T ss_pred CcE
Confidence 553
No 272
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.36 E-value=0.5 Score=54.75 Aligned_cols=188 Identities=11% Similarity=-0.055 Sum_probs=107.7
Q ss_pred eEEEEe-cEEEEEEecCCcc-eEEe---cccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee----cCC
Q psy6572 541 NLLFTN-KYYIREVTQAGVM-TIRI---HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP----ATS 610 (1416)
Q Consensus 541 ~li~s~-~~~I~~i~l~g~~-~~~~---~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~----l~~ 610 (1416)
+|+.+. ...|+..++.... ...+ .....+.+|+|.+.++.++++-... +.|....+.+ ....+.. ...
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--GATTLRDFSGSVIQVFAKTDSWDYW 165 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--TEEEEEETTSCEEEEEECCCCSSCC
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--CEEEEEECCCCceEEEeccCCCCCC
Confidence 444433 3456767776544 2222 2345677889987444444443332 3677777773 2223322 244
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC---CC
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS---NP 687 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs---~r 687 (1416)
+..|++.+.+..| ++-...+.|.+.++.+.....+. .......+|++.|...+++++-.. ...|...++... ..
T Consensus 166 v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~ 242 (383)
T 3ei3_B 166 YCCVDVSVSRQML-ATGDSTGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSV-DATVKLWDLRNIKDKNS 242 (383)
T ss_dssp EEEEEEETTTTEE-EEEETTSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEET-TSEEEEEEGGGCCSTTC
T ss_pred eEEEEECCCCCEE-EEECCCCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeC-CCEEEEEeCCCCCcccc
Confidence 6788998766555 45556689999999877655554 344668899999997744444322 235666666531 12
Q ss_pred EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC-CCceEEE
Q psy6572 688 KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLN-GENIKII 733 (1416)
Q Consensus 688 ~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld-G~~r~~v 733 (1416)
.+...........|++.+..++++++-...+.|...++. +.....+
T Consensus 243 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 243 YIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred eEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 222223445668899987344444444456788888864 3333333
No 273
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.31 E-value=0.62 Score=53.24 Aligned_cols=201 Identities=10% Similarity=-0.078 Sum_probs=112.6
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCC----CeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ----PELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~----~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
..+.+|+|.+.++.|+..... +.|+...+.+. ...+.. ...+.+|++.+.+..|+ +-...+.|.+.++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNN---HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV-TCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSS---SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEEEETT
T ss_pred CCeEEEEECCCCCEEEEEeCC---CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEE-EEcCCCeEEEEECCCC
Confidence 446678888776666655333 36776666632 122222 45677899988555554 4455678888887654
Q ss_pred c-eEEEE-cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE----EEeecCCCCCeeEEeecCCCeEEEecC
Q psy6572 642 F-RKVLI-NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK----VIISKNLSWPNALTISYETNELFWGDA 715 (1416)
Q Consensus 642 ~-~~vLi-~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~----vlv~~~l~~P~gLaiD~~~~rLYWtD~ 715 (1416)
. ...+. ......+..|++.|...+|+..... ..|...+++..... .+..........|++.+....|+ +-.
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~ 161 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGS--RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA-AGS 161 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETT--SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE-EEE
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCC--CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE-EEc
Confidence 3 22322 2344567899999987788777643 34555555554432 12122234567888876444444 434
Q ss_pred CCCeEEEEeCC-------------------CCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCC
Q psy6572 716 HEDYIAVSDLN-------------------GENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 716 ~~~~I~~~~ld-------------------G~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
..+.|...++. +.....+ ... -....+|++. .+.++++-...+.|...+..++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSS------CGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCC------SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEec-CCC------CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 45667666642 2211111 111 2234566663 3445555556677777666666
Q ss_pred CceEEE
Q psy6572 776 KNCTSV 781 (1416)
Q Consensus 776 ~~~~~l 781 (1416)
.....+
T Consensus 235 ~~~~~~ 240 (372)
T 1k8k_C 235 MAVATL 240 (372)
T ss_dssp TEEEEE
T ss_pred ceeEEE
Confidence 654444
No 274
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.26 E-value=0.91 Score=50.87 Aligned_cols=197 Identities=8% Similarity=-0.028 Sum_probs=108.2
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCe-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPE-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
..+.+|+|.+.++.|+..... +.|+...+. .... .+.. ...+..|++.+.++. +.+-...+.|.+.++.....
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~d---g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSAD---KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-LVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEEECCCCCEEEEeeCC---CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCE-EEEECCCCEEEEEECCCCcE
Confidence 456778888877666555433 356666665 3322 2222 445677888875544 44555667888888875443
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVS 723 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~ 723 (1416)
...+.........+++.|...+|+..... ..|...++........+...-.....|++.+....| .+-...+.|...
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~w 176 (312)
T 4ery_A 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIW 176 (312)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCC--CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEE
Confidence 33333444567889999987777766533 356666665433333333233345678887644444 444455677777
Q ss_pred eCCCC-ceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 724 DLNGE-NIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 724 ~ldG~-~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
++... ..+.+.... ......+++. .+.++++-...+.|...+..++.
T Consensus 177 d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 177 DTASGQCLKTLIDDD------NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp ETTTCCEEEEECCSS------CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred ECCCCceeeEEeccC------CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 76533 333332211 1122334443 33444444445556555544443
No 275
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.26 E-value=0.32 Score=56.30 Aligned_cols=160 Identities=11% Similarity=0.085 Sum_probs=89.5
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCCCceEEEEccCC--cEEEeeCCCCeEEEeecCCC
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATSPDGLTVDWVGR--NLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~p~gLAvD~~~~--~LYwtD~~~~~I~v~~ldG~ 641 (1416)
...+.+|+|.+..+.++++-... +.|+...+.+ ....... ...+..+++.+... .++++-...+.|.+.++...
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFD--KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETT--SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred CCcEEEEEEccCCCcEEEEEeCC--CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 34567888888555444443332 3677777773 2222222 44455666666533 36666666778888888754
Q ss_pred ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC-CEEEe---------------ecCCCCCeeEEeec
Q psy6572 642 FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN-PKVII---------------SKNLSWPNALTISY 705 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~-r~vlv---------------~~~l~~P~gLaiD~ 705 (1416)
.....+........+|++.|...+|+++-.. ...|...++.... ....+ ...-.....|++.+
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASA-DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEET-TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcC-CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 4333333444567899999998875555322 2356666654332 11111 11223456788876
Q ss_pred CCCeEEEecCCCCeEEEEeCCCCc
Q psy6572 706 ETNELFWGDAHEDYIAVSDLNGEN 729 (1416)
Q Consensus 706 ~~~rLYWtD~~~~~I~~~~ldG~~ 729 (1416)
....|+.+ ...+.|...++....
T Consensus 256 ~~~~l~~~-~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 256 DGLHLLTV-GTDNRMRLWNSSNGE 278 (408)
T ss_dssp TSSEEEEE-ETTSCEEEEETTTCC
T ss_pred CCCEEEEe-cCCCeEEEEECCCCc
Confidence 54455544 345677777765433
No 276
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.26 E-value=0.24 Score=66.48 Aligned_cols=197 Identities=10% Similarity=-0.039 Sum_probs=117.5
Q ss_pred EEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee------------cCCCceE
Q psy6572 548 YYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP------------ATSPDGL 614 (1416)
Q Consensus 548 ~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~------------l~~p~gL 614 (1416)
..|+.+++++.....+........++|.+.++.|.++.. ..|+.+.+.+. ...+.. ...+.++
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~----~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~ 301 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKG----GSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAE 301 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEET----TEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEE
T ss_pred eEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeC----CEEEEecCCceEeeeeccCccccccccccccccccee
Confidence 357777776654222222223445677777776766531 36776665421 111111 1247789
Q ss_pred EEE-ccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCC-CcceeeecCCcceEEEeeCCCCceEE-EEecCCCCCEEEe
Q psy6572 615 TVD-WVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQ-EPRGIALNPAYGYMYWTDWGQNAHIG-KAKMDGSNPKVII 691 (1416)
Q Consensus 615 AvD-~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~-~P~gIavDp~~g~LYWtD~g~~~~I~-ra~mDGs~r~vlv 691 (1416)
++. +.+..|+++. .+.|.+.++.+.....+. .... .++++++. ...+|+++.. ..+|+ ..++++...+.+.
T Consensus 302 ~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~s-dg~~l~~~s~--~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 302 DFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVP-EPLRIRYVRRGGD-TKVAFIHGTR--EGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp EEEECGGGCEEEEE--TTEEEEECTTSSBEEECS-CCSCEEEEEECSS-SEEEEEEEET--TEEEEEEEETTTCCEEECC
T ss_pred eecCCCCCEEEEEE--cCEEEEEcCCCCceEEcc-CCCcceEEeeeEc-CCCeEEEEEC--CCceEEEEECCCCCceEec
Confidence 999 8888887776 568888888766544432 2222 56677887 5556666553 34788 8888876655554
Q ss_pred ecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe--cCcEEEeec
Q psy6572 692 SKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDW 762 (1416)
Q Consensus 692 ~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~ 762 (1416)
.....+..+++.+...+|+++.. .+.|...++.+...+.++... .....++++. +.+|+++..
T Consensus 376 -~~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~------~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 376 -ENLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSR------EAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp -CCCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECS------SSCCCCEEECTTSCEEEEEEE
T ss_pred -CCccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCC------CCCccceEECCCCCeEEEEec
Confidence 44456788999887777877654 468999998766666665432 1222445553 345655543
No 277
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.25 E-value=0.41 Score=61.69 Aligned_cols=204 Identities=10% Similarity=0.004 Sum_probs=122.9
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCCC--CeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ--PELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~--~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
...+.+|+|.+.+..|...... +.|....+.+. ...+.. -..+.+|++.+.+..|.... ..+.|.+.++....
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYS---GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTGE 88 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETT---SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTCC
T ss_pred CCceEEEEECCCCCEEEEEeCC---CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCc
Confidence 3457788888877777766543 36777766622 122222 45577889998777666554 46789999987554
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC-CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN-PKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~-r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
....+.......+.|++.|...+|+..... ..|...+++... ....+...-.....+++.+..+.++++-...+.|.
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD--LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETT--SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCC--CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 433344455668899999998888766532 356666776542 23333334445678888764555666655667888
Q ss_pred EEeCCCCceEEEEeccCCCCcccccceeEEEe---cCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 722 VSDLNGENIKIIVSRRMDPTINLHHVFALAVF---EDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 722 ~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~---~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
..++.+......+.... ......+++. .+.++++-...+.|...+..++.....
T Consensus 167 vwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 223 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQ-----ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (814)
T ss_dssp EEETTCSSCSEEEECCC-----TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE
T ss_pred EEECCCCcceeEEecCC-----CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 88875444333333220 1333455553 455555555566666665555544333
No 278
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.24 E-value=0.19 Score=64.11 Aligned_cols=178 Identities=9% Similarity=-0.027 Sum_probs=99.7
Q ss_pred EEEEEEecCCcc-eEEecccc---cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cC-----------
Q psy6572 548 YYIREVTQAGVM-TIRIHNQT---NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--AT----------- 609 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~~~~l~---~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~----------- 609 (1416)
..|+..++.+.. ..+..... .+..++|.+.++.|.++... .|+++.+. +....+.. ..
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~----~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN----NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETT----EEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECC----eEEEEECCCCceEEEecCCCCCceECccccee
Confidence 345566665544 22222111 25678888888888776542 67877776 33333332 11
Q ss_pred -------CCceEEEEccCCcEEEeeCCC---------------------------------CeEEEeecCCCce-EEEEc
Q psy6572 610 -------SPDGLTVDWVGRNLYWCDKGL---------------------------------DTIEVAKLDGRFR-KVLIN 648 (1416)
Q Consensus 610 -------~p~gLAvD~~~~~LYwtD~~~---------------------------------~~I~v~~ldG~~~-~vLi~ 648 (1416)
.+.++++.+-++.|+++.... .+|.+.++.+... ..|..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC
Confidence 235788888888787764221 1566666665542 22221
Q ss_pred CC-----CCCcceeeecCCcceEE-EeeCC-CCceEEEEecCCCCCEEEeec-CCCC----CeeEEeecCCCeEEEe-cC
Q psy6572 649 KG-----LQEPRGIALNPAYGYMY-WTDWG-QNAHIGKAKMDGSNPKVIISK-NLSW----PNALTISYETNELFWG-DA 715 (1416)
Q Consensus 649 ~~-----l~~P~gIavDp~~g~LY-WtD~g-~~~~I~ra~mDGs~r~vlv~~-~l~~----P~gLaiD~~~~rLYWt-D~ 715 (1416)
.. ......+++.|...+|+ +++.+ ....|...++.+...+.++.. .-.+ +..+++.+...+|||+ ..
T Consensus 247 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 326 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (723)
T ss_dssp CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence 10 12345688888876664 33432 224688888876655444432 2222 2478888777778876 33
Q ss_pred CCC------eEEEEe-CCCCc
Q psy6572 716 HED------YIAVSD-LNGEN 729 (1416)
Q Consensus 716 ~~~------~I~~~~-ldG~~ 729 (1416)
..+ .|+.++ .++..
T Consensus 327 ~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 327 PQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCSSSSCEEEEEEECSSCCSS
T ss_pred ccCCCcceeEEEEEeccCCCC
Confidence 333 677887 55554
No 279
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.24 E-value=0.0032 Score=56.02 Aligned_cols=52 Identities=23% Similarity=0.358 Sum_probs=27.0
Q ss_pred cceecCCceEEeeC-CCceecCCCCCccccCCcCCCCCccceeeecCCeeeecCCCCcEEecCCCceE
Q psy6572 467 ECIDLKIGYKCACR-KGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCK 533 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~-~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~ 533 (1416)
.|+|++++|+|.+. .||.+. .++..+. .++ ..+...+.|++||+|. ++.+|+
T Consensus 18 ~C~Nt~Gsy~C~~~~~g~~~~-~~~~~~~--~~~-----------~~~~~~~~C~~Gy~~~-~~~~C~ 70 (71)
T 2kl7_A 18 KCINHYGGYLCLPRSAAVIND-LHGEGPP--PPV-----------PPAQHPNPCPPGYEPD-DQDSCV 70 (71)
T ss_dssp EEEETTCCEEEEETTSCCCSC-CSCSSCC--CSS-----------CSCSSCCCSCTTEEEE-CCCCSC
T ss_pred EeECCCCCeEecccCCccccc-ccCCccc--ccc-----------ccCccccCCCCCeeeC-CCCccc
Confidence 57777777777744 466554 3332221 010 1122244688999877 333564
No 280
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.19 E-value=0.017 Score=70.90 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=75.5
Q ss_pred cCCCceEEEEccCCcEEEeeCC---------------------CCeEEEeecCCCc-------eEE-EEc----------
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKG---------------------LDTIEVAKLDGRF-------RKV-LIN---------- 648 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~---------------------~~~I~v~~ldG~~-------~~v-Li~---------- 648 (1416)
+..|++|+|++.++.||++-.. .++|++...++.. -.+ |+.
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 5689999999999999998532 2679998876431 123 321
Q ss_pred ----------CCCCCcceeeecCCcceEEE-eeCCC----------CceEEEEecCCCCCEEEee-cCCCCCeeEEeecC
Q psy6572 649 ----------KGLQEPRGIALNPAYGYMYW-TDWGQ----------NAHIGKAKMDGSNPKVIIS-KNLSWPNALTISYE 706 (1416)
Q Consensus 649 ----------~~l~~P~gIavDp~~g~LYW-tD~g~----------~~~I~ra~mDGs~r~vlv~-~~l~~P~gLaiD~~ 706 (1416)
..|..|.+|++|+. |.||+ ||.+. +..++++..+....+.++. .....|+||++.+.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred ccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC
Confidence 13678999999986 88999 88531 2368888775333444443 34567999999998
Q ss_pred CCeEEEec
Q psy6572 707 TNELFWGD 714 (1416)
Q Consensus 707 ~~rLYWtD 714 (1416)
...||++-
T Consensus 542 ~ktLfV~v 549 (592)
T 4a9v_A 542 QKTLFVGI 549 (592)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 88999874
No 281
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.18 E-value=1.5 Score=51.20 Aligned_cols=212 Identities=12% Similarity=0.025 Sum_probs=120.4
Q ss_pred EEEEEEecCCcc-eEE-ecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-C-CCeEEee-cCCCceEEEEccCCc
Q psy6572 548 YYIREVTQAGVM-TIR-IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S-QPELLFP-ATSPDGLTVDWVGRN 622 (1416)
Q Consensus 548 ~~I~~i~l~g~~-~~~-~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s-~~~~l~~-l~~p~gLAvD~~~~~ 622 (1416)
..|+..++.... ... ......+.+|+|.+.++.|+..... +.|+...+. . ....+.. ...+..|++.+.++.
T Consensus 119 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 446666665444 222 2344567889998877766655443 378888877 3 3334433 566788999876555
Q ss_pred EEEeeCCCCeEEEeecCCCce-EEEEcC-----------------------CCCCcceeeecCCcceEEEeeCCCCceEE
Q psy6572 623 LYWCDKGLDTIEVAKLDGRFR-KVLINK-----------------------GLQEPRGIALNPAYGYMYWTDWGQNAHIG 678 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~~-~vLi~~-----------------------~l~~P~gIavDp~~g~LYWtD~g~~~~I~ 678 (1416)
|+ +-...+.|.+.++..... ..+... .......|++.|...+|+..... ..|.
T Consensus 196 l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~ 272 (420)
T 3vl1_A 196 VL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS--GVIT 272 (420)
T ss_dssp EE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT--SCEE
T ss_pred EE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC--CeEE
Confidence 55 555567788888764332 222211 12345567778876677665532 3566
Q ss_pred EEecCCCCCEEEeec-CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCC-c-eEEEEeccCCCCcccccceeEEEecC
Q psy6572 679 KAKMDGSNPKVIISK-NLSWPNALTISYETNELFWGDAHEDYIAVSDLNGE-N-IKIIVSRRMDPTINLHHVFALAVFED 755 (1416)
Q Consensus 679 ra~mDGs~r~vlv~~-~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~-~-r~~v~~~~~~p~~~l~~P~~lav~~d 755 (1416)
..++........+.. .......|++.+....++++-...+.|...++... . ...+.... -.....+....+
T Consensus 273 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~ 346 (420)
T 3vl1_A 273 VHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE------GTPINNVYFAAG 346 (420)
T ss_dssp EEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST------TSCEEEEEEETT
T ss_pred EEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC------CCCceEEEeCCC
Confidence 666654443333322 23456789998765535555556678888887543 2 33333211 122234444556
Q ss_pred cEEEeecCCCeeEEec
Q psy6572 756 HLFWTDWEMKSIERCD 771 (1416)
Q Consensus 756 ~LYwtD~~~~~I~~~n 771 (1416)
.++++-...+.|..-+
T Consensus 347 ~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 347 ALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEEETTTEEEEEEE
T ss_pred CEEEEecCCccEEEEe
Confidence 6666666556555444
No 282
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.16 E-value=0.45 Score=60.79 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=104.9
Q ss_pred EEEEEEecCCcce--EEecccccceeeeeecCCCeEEEeeccC----------CCccEEEEecCCC---CeEEeec-C-C
Q psy6572 548 YYIREVTQAGVMT--IRIHNQTNAVGLDFDWVDNCLYWSDVTM----------HGSSIRRSCNNSQ---PELLFPA-T-S 610 (1416)
Q Consensus 548 ~~I~~i~l~g~~~--~~~~~l~~~~~l~~D~~~~~LYwtD~~~----------~~~~I~r~~l~s~---~~~l~~l-~-~ 610 (1416)
..|+.+++.+... ..+... ...++++. .++.||++.... ....|++..+.+. .++|... . .
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 5688888876652 222221 12456666 677788775441 1246888888722 2344442 2 1
Q ss_pred ---CceEEEEccCCcEEEeeCC---CCeEEEeecCCC--ceEEEEcCCCCCcceeeecCCcceEEEeeCCC--CceEEEE
Q psy6572 611 ---PDGLTVDWVGRNLYWCDKG---LDTIEVAKLDGR--FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ--NAHIGKA 680 (1416)
Q Consensus 611 ---p~gLAvD~~~~~LYwtD~~---~~~I~v~~ldG~--~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~--~~~I~ra 680 (1416)
..++++.+-++.|+++... ...|++.++++. ..+.|.. ....-... +.+..++||++.... +.+|.++
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~-~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG-DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-CCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 2467777778888776542 258999998654 2334432 22211122 566667777764322 4689999
Q ss_pred ecCCCCC---EEEeecCCCCCeeEEeecCCCeEEEecCCC--CeEEEEeCCCCceEEE
Q psy6572 681 KMDGSNP---KVIISKNLSWPNALTISYETNELFWGDAHE--DYIAVSDLNGENIKII 733 (1416)
Q Consensus 681 ~mDGs~r---~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~--~~I~~~~ldG~~r~~v 733 (1416)
++++... +.|+...-... .+.+..++|+++-... .+|..++++|...+.|
T Consensus 311 d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 311 DAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV 365 (693)
T ss_dssp ETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred eCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe
Confidence 9988665 55554332222 4444578888775433 4788889988766555
No 283
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.15 E-value=0.61 Score=52.60 Aligned_cols=200 Identities=11% Similarity=0.124 Sum_probs=112.7
Q ss_pred CeEEEEe-cEEEEEEecCCcce-EEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee--cCCCceEE
Q psy6572 540 PNLLFTN-KYYIREVTQAGVMT-IRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP--ATSPDGLT 615 (1416)
Q Consensus 540 ~~li~s~-~~~I~~i~l~g~~~-~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~--l~~p~gLA 615 (1416)
..|+++. ...|..++..|... ..........++.++. .+.||+.... ..|++++..+....... ......++
T Consensus 108 ~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt~~---~~l~~~d~~g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGSND---NYLYAINPDGTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEECTT---SEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred CEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEcCC---CEEEEECCCCCEeEEEecCCCceeeeE
Confidence 3445544 45677777774431 1111222234445543 4556665432 36777776622111111 34456677
Q ss_pred EEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCC
Q psy6572 616 VDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNL 695 (1416)
Q Consensus 616 vD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l 695 (1416)
+|. .++||++. +.|.+.+.+|.....+. .....+.++++|+. |.||++..+ ..|.+.+.+|.....+. ..-
T Consensus 184 ~d~-~g~l~v~t---~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~~-g~l~v~t~~--~gl~~~~~~g~~~~~~~-~~~ 254 (330)
T 3hxj_A 184 IGK-DGTIYFGS---DKVYAINPDGTEKWNFY-AGYWTVTRPAISED-GTIYVTSLD--GHLYAINPDGTEKWRFK-TGK 254 (330)
T ss_dssp ECT-TCCEEEES---SSEEEECTTSCEEEEEC-CSSCCCSCCEECTT-SCEEEEETT--TEEEEECTTSCEEEEEE-CSS
T ss_pred EcC-CCEEEEEe---CEEEEECCCCcEEEEEc-cCCcceeceEECCC-CeEEEEcCC--CeEEEECCCCCEeEEee-CCC
Confidence 773 67788776 77888886665443332 23355788999875 788888643 36777766665433332 222
Q ss_pred CCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEE-ecCcEEEee
Q psy6572 696 SWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAV-FEDHLFWTD 761 (1416)
Q Consensus 696 ~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav-~~d~LYwtD 761 (1416)
..+..+++| .+++||++.. .+.|..++.+|..+..+... -....++.+ .++.||+..
T Consensus 255 ~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~~g~~~~~~~~~-------~~~~~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 255 RIESSPVIG-NTDTIYFGSY-DGHLYAINPDGTEKWNFETG-------SWIIATPVIDENGTIYFGT 312 (330)
T ss_dssp CCCSCCEEC-TTSCEEEECT-TCEEEEECTTSCEEEEEECS-------SCCCSCCEECTTCCEEEEC
T ss_pred CccccceEc-CCCeEEEecC-CCCEEEECCCCcEEEEEEcC-------CccccceEEcCCCEEEEEc
Confidence 334567776 4778888764 45788888776654443221 123445556 566777754
No 284
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.14 E-value=1.1 Score=52.98 Aligned_cols=160 Identities=10% Similarity=0.032 Sum_probs=95.1
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-CeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-PELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
....+..|+|.+....|+-.... +.|+..++. .. ..++.. ...+..|++.+. +.+..+-...++|.+.++.+.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~D---g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASED---ATIKVWDYETGDFERTLKGHTDSVQDISFDHS-GKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESS---SCEEEEETTTCCCCEEECCCSSCEEEEEECTT-SSEEEEEETTSCCCEEETTSS
T ss_pred cCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCC
Confidence 34456788888876655544333 378888777 33 233333 556778888864 455566666778888887765
Q ss_pred ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 642 FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
.....+........+|++.|...+|+-... ...|..-++........+.....+...+++.+ .+.++++-...+.|.
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~--D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASR--DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVR 259 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEE
Confidence 433223333455788999998766665543 23566666654333333333445556777765 455555555556777
Q ss_pred EEeCCCCceE
Q psy6572 722 VSDLNGENIK 731 (1416)
Q Consensus 722 ~~~ldG~~r~ 731 (1416)
..++......
T Consensus 260 vwd~~~~~~~ 269 (410)
T 1vyh_C 260 VWVVATKECK 269 (410)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcee
Confidence 7776544333
No 285
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.10 E-value=0.0033 Score=60.67 Aligned_cols=46 Identities=30% Similarity=0.736 Sum_probs=37.2
Q ss_pred CCccccCCcCC--CCCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 490 KHLCVDTNECL--DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 490 ~~tC~didEC~--~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
+..| ++|||+ +++|++.|+|+.++|+|.|++||++. ++++|..++.
T Consensus 24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dide 71 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDE 71 (107)
T ss_dssp SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC---
T ss_pred CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccc
Confidence 4467 899998 47899999999999999999999985 5678886543
No 286
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.73 Score=52.60 Aligned_cols=202 Identities=7% Similarity=-0.051 Sum_probs=108.8
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEcc-CCcEEEeeCCCCeEEEeecC
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWV-GRNLYWCDKGLDTIEVAKLD 639 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~-~~~LYwtD~~~~~I~v~~ld 639 (1416)
...+.+|+|.+.++.|...... +.|+...+. ...+.+.. ...+..|++.+. .++++++-...+.|.+.++.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred cccEEEEEEcCCCCEEEEEECC---CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 3456778888777666655433 256666654 22222222 334455666443 24555566666788888887
Q ss_pred CCc--eEEEEcCCCCCcceeeecCC--cceEEEeeCCCCceEEEEecCCC--CCEEEeecCCCCCeeEEeecC-------
Q psy6572 640 GRF--RKVLINKGLQEPRGIALNPA--YGYMYWTDWGQNAHIGKAKMDGS--NPKVIISKNLSWPNALTISYE------- 706 (1416)
Q Consensus 640 G~~--~~vLi~~~l~~P~gIavDp~--~g~LYWtD~g~~~~I~ra~mDGs--~r~vlv~~~l~~P~gLaiD~~------- 706 (1416)
... ....+.........|++.|. ..+|+.+... ..|...++... .....+.........|++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC--CcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 654 22223234556889999998 5566665533 35666666544 333344444455677888764
Q ss_pred -----CCeEEEecCCCCeEEEEeCCC-CceEEEEeccCCCCcccccceeEEEec----CcEEEeecCCCeeEEecccCC
Q psy6572 707 -----TNELFWGDAHEDYIAVSDLNG-ENIKIIVSRRMDPTINLHHVFALAVFE----DHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 707 -----~~rLYWtD~~~~~I~~~~ldG-~~r~~v~~~~~~p~~~l~~P~~lav~~----d~LYwtD~~~~~I~~~nk~tG 775 (1416)
++.++++-...+.|...++.. .....++..-. .......+|++.. +.++.+-...+.|...+..++
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe---cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 355555555566777777643 22222222100 0022345666643 455555555555555544444
No 287
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.05 E-value=2.8 Score=49.00 Aligned_cols=200 Identities=12% Similarity=0.024 Sum_probs=104.5
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecCCC-Ce-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PE-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV 645 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v 645 (1416)
+.+|+|.+.++.|+..... +.|+..++.+. .. ++.. ...+..|++.+.+..| ++-...++|.+.++.......
T Consensus 126 v~~v~~s~dg~~l~s~~~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED---RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEE-EEecCCCcEEEEECCCCeeEE
Confidence 5678888877766655443 36777777632 21 2222 4456778887766555 455567888888886544333
Q ss_pred EEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-------cCCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 646 LINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-------KNLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 646 Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-------~~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
.+ ........+++.|..+.++.+-.. ...|...++........+. .......+|++.+....|+ +-...+
T Consensus 202 ~~-~~~~~v~~~~~~~~~~~~l~~~s~-d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~d~ 278 (393)
T 1erj_A 202 TL-SIEDGVTTVAVSPGDGKYIAAGSL-DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDR 278 (393)
T ss_dssp EE-ECSSCEEEEEECSTTCCEEEEEET-TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE-EEETTS
T ss_pred EE-EcCCCcEEEEEECCCCCEEEEEcC-CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE-EEeCCC
Confidence 22 223457889999866665555322 2345555554332221111 1123456788876444444 434456
Q ss_pred eEEEEeCCCCceE------------EEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 719 YIAVSDLNGENIK------------IIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 719 ~I~~~~ldG~~r~------------~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
.|...++...... ..+.+. -....++++. .+.++.+-...+.|..-+..+|....++
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGH------KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp EEEEEEC---------------CEEEEEECC------SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecc------cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 6666665432110 111111 1223455553 3344455555566666666666544443
No 288
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.03 E-value=1.3 Score=51.13 Aligned_cols=158 Identities=11% Similarity=0.034 Sum_probs=92.1
Q ss_pred ccceeeeee----cCCCe-EEEeeccCCCccEEEEecCC--------CCe-----EEe------e--cCCCceEEEEccC
Q psy6572 567 TNAVGLDFD----WVDNC-LYWSDVTMHGSSIRRSCNNS--------QPE-----LLF------P--ATSPDGLTVDWVG 620 (1416)
Q Consensus 567 ~~~~~l~~D----~~~~~-LYwtD~~~~~~~I~r~~l~s--------~~~-----~l~------~--l~~p~gLAvD~~~ 620 (1416)
..+.+|+|. +..+. |+..... +.|+...+.. ... .+. . ...+..|++.+.+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc
Confidence 567788888 77777 5555443 2455444332 111 331 1 4557888888766
Q ss_pred CcEEEeeCCCCeEEEeecCCCceEEEEcC---C---CCCcceeeecCCcceEEEeeCC-CCceEEEEecCCCCCEEEeec
Q psy6572 621 RNLYWCDKGLDTIEVAKLDGRFRKVLINK---G---LQEPRGIALNPAYGYMYWTDWG-QNAHIGKAKMDGSNPKVIISK 693 (1416)
Q Consensus 621 ~~LYwtD~~~~~I~v~~ldG~~~~vLi~~---~---l~~P~gIavDp~~g~LYWtD~g-~~~~I~ra~mDGs~r~vlv~~ 693 (1416)
++++-...+.|.+.++........+.. . ...+..|++.|...+|+.+... ....|...++........+..
T Consensus 199 --~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 199 --LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp --EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred --eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 666667778999999875443333323 2 5567899999987776665421 004677777754433333332
Q ss_pred -------------CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCce
Q psy6572 694 -------------NLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENI 730 (1416)
Q Consensus 694 -------------~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r 730 (1416)
.-.....|++.+....|+ +-...+.|...++.....
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTTEE
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEE-EEeCCCeEEEEEcCCCce
Confidence 334557888876554444 444567888888754433
No 289
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.02 E-value=1.4 Score=50.29 Aligned_cols=158 Identities=9% Similarity=0.025 Sum_probs=88.9
Q ss_pred cccceeeeeecC--CCeEEEeeccCCCccEEEEecCC-CCeEEee----cCCCceEEEEccC-CcEEEeeCCCCeEEEee
Q psy6572 566 QTNAVGLDFDWV--DNCLYWSDVTMHGSSIRRSCNNS-QPELLFP----ATSPDGLTVDWVG-RNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 566 l~~~~~l~~D~~--~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~----l~~p~gLAvD~~~-~~LYwtD~~~~~I~v~~ 637 (1416)
...+.+|+|.+. .+.|+..... +.|+...+.+ ....+.. ...+..|++.+.. +.++++-...+.|.+.+
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 345667887654 4555554443 3677776663 2122222 4556778887763 45555666678888888
Q ss_pred cCCC--ceEEEEcCCCCCcceeeecCC-------------cceEEEeeCCCCceEEEEecCCCCCE-EEee---cCCCCC
Q psy6572 638 LDGR--FRKVLINKGLQEPRGIALNPA-------------YGYMYWTDWGQNAHIGKAKMDGSNPK-VIIS---KNLSWP 698 (1416)
Q Consensus 638 ldG~--~~~vLi~~~l~~P~gIavDp~-------------~g~LYWtD~g~~~~I~ra~mDGs~r~-vlv~---~~l~~P 698 (1416)
+... .....+.........|++.|. ..+|+..... ..|...++...... .++. ..-...
T Consensus 132 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 132 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--NLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp CCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT--SCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred cCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC--CeEEEEEecCCCcceeeEEEEecccCcE
Confidence 8755 233333345556788999985 3444444322 35666666543332 2221 223445
Q ss_pred eeEEeecCC--CeEEEecCCCCeEEEEeCCCC
Q psy6572 699 NALTISYET--NELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 699 ~gLaiD~~~--~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
..|++.+.. ++++.+-...+.|...++...
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 788888752 455555445566777776543
No 290
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.02 E-value=0.2 Score=59.87 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=98.7
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
..+.+|+|++....|..+-... +.|+..++. .....+.. ...+.+|++.+..++++++-...++|.+.++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~d--g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKG--GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETT--SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCC--CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 3467888888666555544432 378777776 33333332 4567899998888888888888889999999887
Q ss_pred ceEEEEcCC--CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCe
Q psy6572 642 FRKVLINKG--LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDY 719 (1416)
Q Consensus 642 ~~~vLi~~~--l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~ 719 (1416)
...++.... .....+|++.|...+|+.... ...|...+++|.....+. ..-....+|++.+....++.+-...+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~--dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDN--VGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECS--SSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSB
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeC--CCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCcce
Confidence 766665432 234567888888666665542 346777778775432221 123345678887766666665544555
Q ss_pred EEEEeC
Q psy6572 720 IAVSDL 725 (1416)
Q Consensus 720 I~~~~l 725 (1416)
|...++
T Consensus 275 v~iwd~ 280 (435)
T 4e54_B 275 VKIWDL 280 (435)
T ss_dssp CCEEET
T ss_pred eeEEec
Confidence 655555
No 291
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.00 E-value=1 Score=55.40 Aligned_cols=204 Identities=6% Similarity=-0.145 Sum_probs=113.8
Q ss_pred ccccceeeeeecCCCeEEEeeccCCC-ccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHG-SSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~-~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
....+.+|+|.+.++.|+........ ..|+..........+.. ...+..|++.+.+..++.+-...+.|.+.++....
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~ 194 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 194 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc
Confidence 34557889999888877776543210 13443331121122222 45677888888777677777778899998876544
Q ss_pred eEEEEcCCCC---CcceeeecCC-cceEEEeeCCCCceEEEEecCCCCCEEEe-e---cCCCCCeeEEeecCCCeEEEec
Q psy6572 643 RKVLINKGLQ---EPRGIALNPA-YGYMYWTDWGQNAHIGKAKMDGSNPKVII-S---KNLSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 643 ~~vLi~~~l~---~P~gIavDp~-~g~LYWtD~g~~~~I~ra~mDGs~r~vlv-~---~~l~~P~gLaiD~~~~rLYWtD 714 (1416)
....+..... ....|++.|. ..+|+..... ..|...++........+ . ..-....+|++. .++++++-
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~ 270 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD--RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATV 270 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT--CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEE
T ss_pred eeeeecccCCCCceEEEEEECCCCCCEEEEEeCC--CeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEE
Confidence 3333333333 5789999998 5566655432 35766666544333333 2 233445678886 45555555
Q ss_pred CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccC
Q psy6572 715 AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYT 774 (1416)
Q Consensus 715 ~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~t 774 (1416)
...+.|...++........+.... ...-..+.++.+..+.++++-...+.|...+..+
T Consensus 271 ~~d~~i~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 271 GADATIRVWDVTTSKCVQKWTLDK--QQLGNQQVGVVATGNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCT--TCGGGCEEEEEEEETTEEEEEETTSCEEEEETTE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCC--CcccCceeEEEeCCCCeEEEEECCCCEEEEECCC
Confidence 556788888876433322222110 0001233455554555555555566666555443
No 292
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.96 E-value=0.32 Score=62.57 Aligned_cols=113 Identities=12% Similarity=0.189 Sum_probs=62.6
Q ss_pred ceeeecCCcce-EEEeeCCC-CceEEEEecCCCC-------CEEEe-ecCCCC-----CeeEEeecCCCeEE-EecC--C
Q psy6572 655 RGIALNPAYGY-MYWTDWGQ-NAHIGKAKMDGSN-------PKVII-SKNLSW-----PNALTISYETNELF-WGDA--H 716 (1416)
Q Consensus 655 ~gIavDp~~g~-LYWtD~g~-~~~I~ra~mDGs~-------r~vlv-~~~l~~-----P~gLaiD~~~~rLY-WtD~--~ 716 (1416)
..++.-|.... +||+..+. ...|...++++.. .+.++ ...-.| +..+++.+...+|+ |+-. +
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 34555666443 33444332 2467888877654 22332 222222 34667766566665 6632 3
Q ss_pred CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecC------CCeeEEeccc
Q psy6572 717 EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWE------MKSIERCDKY 773 (1416)
Q Consensus 717 ~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~------~~~I~~~nk~ 773 (1416)
...|+.++++|...+.|..+.. .+..+.+ +.+++||++... ...|++++..
T Consensus 343 ~~~l~~~~~~~~~~~~lT~g~~----~v~~~~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~~ 399 (740)
T 4a5s_A 343 YRHICYFQIDKKDCTFITKGTW----EVIGIEA--LTSDYLYYISNEYKGMPGGRNLYKIQLI 399 (740)
T ss_dssp CEEEEEEETTCSSCEESCCSSS----CEEEEEE--ECSSEEEEEESCGGGCTTCBEEEEEETT
T ss_pred ceEEEEEECCCCceEecccCCE----EEEEEEE--EeCCEEEEEEecCCCCCceeEEEEEECC
Confidence 4589999999988776655430 1222222 447788887654 2467777643
No 293
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.96 E-value=0.11 Score=69.90 Aligned_cols=206 Identities=12% Similarity=0.055 Sum_probs=123.8
Q ss_pred eEEEEecEEEEEEecCCcceEEecc------------cccceeeeee-cCCCeEEEeeccCCCccEEEEecCC-CCeEEe
Q psy6572 541 NLLFTNKYYIREVTQAGVMTIRIHN------------QTNAVGLDFD-WVDNCLYWSDVTMHGSSIRRSCNNS-QPELLF 606 (1416)
Q Consensus 541 ~li~s~~~~I~~i~l~g~~~~~~~~------------l~~~~~l~~D-~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~ 606 (1416)
.|+++....|+.+++.+.....+.. ...+.+++|. +.++.|.++.. ..|+.+.+.+ ....+.
T Consensus 258 ~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~----~~i~~~~~~~~~~~~~~ 333 (1045)
T 1k32_A 258 RILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR----GQAFIQDVSGTYVLKVP 333 (1045)
T ss_dssp CEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET----TEEEEECTTSSBEEECS
T ss_pred EEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc----CEEEEEcCCCCceEEcc
Confidence 4555555667776663332111111 1246778888 87777776652 2677776652 222221
Q ss_pred e-cC-CCceEEEEccCCcEEEeeCCCCeEE-EeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 607 P-AT-SPDGLTVDWVGRNLYWCDKGLDTIE-VAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 607 ~-l~-~p~gLAvD~~~~~LYwtD~~~~~I~-v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
. .. .+..+++. .++.|+++.. ..+|. +.++.+...+.|. .....+..+++.|...+|+++... ..|...++.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~--~~v~~~d~~ 408 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR--FEIMTVDLE 408 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT--SEEEEEETT
T ss_pred CCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC--CeEEEEECC
Confidence 1 11 23344444 3445666554 56788 8888877665555 444668899999998888887643 378888887
Q ss_pred CCCCEEEeecCCCCCeeEEeecCCCeEEEecCC---------CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-
Q psy6572 684 GSNPKVIISKNLSWPNALTISYETNELFWGDAH---------EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF- 753 (1416)
Q Consensus 684 Gs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~---------~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~- 753 (1416)
+...+.++........++++.+...+|.|+... ...|...++++...+.+.. . ...+.++++.
T Consensus 409 tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~-~------~~~~~~~~~sp 481 (1045)
T 1k32_A 409 TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT-E------NSHDYAPAFDA 481 (1045)
T ss_dssp TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC-S------SSBEEEEEECT
T ss_pred CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC-C------CcccCCceEcC
Confidence 666555554444445789998877778887542 2478888887755333222 1 3344555553
Q ss_pred -cCcEEEeec
Q psy6572 754 -EDHLFWTDW 762 (1416)
Q Consensus 754 -~d~LYwtD~ 762 (1416)
+.+|||+..
T Consensus 482 dG~~l~~~s~ 491 (1045)
T 1k32_A 482 DSKNLYYLSY 491 (1045)
T ss_dssp TSCEEEEEES
T ss_pred CCCEEEEEec
Confidence 456777654
No 294
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.91 E-value=0.0031 Score=71.81 Aligned_cols=46 Identities=37% Similarity=0.943 Sum_probs=40.7
Q ss_pred cccccCC-CCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 452 VNECNVS-HGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 452 i~eC~~~-~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
.|||... +++ |+|.|+++.++|+|+|.+||+|. .++++|.+.++|.
T Consensus 2 ~~eC~~~~~~~--C~~~C~~~~~~~~C~C~~G~~l~-~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDG--CQHFCLPGQESYTCSCAQGYRLG-EDHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSS--CSSBCCCCTTSCCCBCCTTEEEC-TTSSCEEECSTTC
T ss_pred CCccCCCCCCC--CCCEeeCCCCCeEecCCCCcccC-CCCCccccccccc
Confidence 4788766 677 99999999999999999999998 7889999999874
No 295
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=95.89 E-value=0.23 Score=63.21 Aligned_cols=120 Identities=13% Similarity=0.033 Sum_probs=75.0
Q ss_pred EEEEEecCCcc-eEEecccc----cceeeeeecCCCeEEEeeccCC------CccEEEEecC-CCCeEEeec----CCCc
Q psy6572 549 YIREVTQAGVM-TIRIHNQT----NAVGLDFDWVDNCLYWSDVTMH------GSSIRRSCNN-SQPELLFPA----TSPD 612 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l~----~~~~l~~D~~~~~LYwtD~~~~------~~~I~r~~l~-s~~~~l~~l----~~p~ 612 (1416)
.|+..++.+.. ..++.... .+..++|.+.+++|.++..... ...|+.+.+. +..+.|... ..+.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 45555555444 33333222 3678899998888877643211 1367777777 443334331 1267
Q ss_pred eEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCC------------------CCcceeeecCCcceEEEee
Q psy6572 613 GLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGL------------------QEPRGIALNPAYGYMYWTD 670 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l------------------~~P~gIavDp~~g~LYWtD 670 (1416)
.+++.+.++.|.++.. +.|.+.++++.....+..... ..+.+++..|...+|+++.
T Consensus 118 ~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp BCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 7888888888888765 589999988765555543322 2347899999988777764
No 296
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.87 E-value=1.6 Score=49.02 Aligned_cols=195 Identities=7% Similarity=-0.042 Sum_probs=106.9
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeE---Eee-cCCCceEEEEccC
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPEL---LFP-ATSPDGLTVDWVG 620 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~---l~~-l~~p~gLAvD~~~ 620 (1416)
...|+..++.... ..+......+.+|+|.+.+..|+-.... +.|+..++.+...+ +.. ...+..|++.+..
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTC
T ss_pred CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhhhhcccCCcEEEEEECCCC
Confidence 4457766665444 2233334557789998877766544333 36777777633222 222 4456788888877
Q ss_pred CcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCc-c-eEEEeeCCCCceEEEEecCCCCCEEEeecCCCC
Q psy6572 621 RNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAY-G-YMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSW 697 (1416)
Q Consensus 621 ~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~-g-~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~ 697 (1416)
+.++.+-...+.|.+.++.... ...+..........+++.|.. + +|+-.. ....|..-++........+......
T Consensus 153 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~ 230 (304)
T 2ynn_A 153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSN 230 (304)
T ss_dssp TTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc--CCCeEEEEeCCCCccceeeCCCCCC
Confidence 7888888888899998886443 333332333334556666532 2 333332 2235655565543333333334445
Q ss_pred CeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe
Q psy6572 698 PNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF 753 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~ 753 (1416)
...+++.+.. .++.+-...+.|...++........+... ......|+++
T Consensus 231 v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~------~~~~~~~~~~ 279 (304)
T 2ynn_A 231 VSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVEKTLNVG------LERSWCIATH 279 (304)
T ss_dssp EEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCS------SSSEEEEEEC
T ss_pred EEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeeccCC------CccEEEEEEC
Confidence 5677777644 44444444567777776543333233322 3344566654
No 297
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.85 E-value=0.0084 Score=69.32 Aligned_cols=58 Identities=33% Similarity=0.856 Sum_probs=46.0
Q ss_pred CCCCCCCCCCc--ccccccCC-CCCCcccccceecCCceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 440 DCGDNSDEFSC--FVNECNVS-HGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 440 dC~dgsDe~~C--~i~eC~~~-~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
.|..|-....| +++||... .+. |.+.|++++++|+|.|++||.+. .++++|.++++|.
T Consensus 29 ~C~~g~~g~~C~~~~~eC~~~~~~~--C~~~C~~~~g~~~C~C~~g~~~~-~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 29 TCSPGYEGSNCELAKNECHPERTDG--CQHFCLPGQESYTCSCAQGYRLG-EDHKQCVPHDQCA 89 (317)
T ss_dssp CCSSSCCSSSSCCCSSSCCTTCTTS--CSSEEECCSSSCEEECCTTEECC-TTSSCCEECSSCC
T ss_pred ECCCCCcCCccccCcccCCCCCCCC--CcCccccCCCeeEEecccccccc-ccccccccccccc
Confidence 35555445567 58899652 244 99999999999999999999987 6788999999874
No 298
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.83 E-value=0.39 Score=54.32 Aligned_cols=203 Identities=9% Similarity=-0.062 Sum_probs=109.2
Q ss_pred cccccceeeeeecCCC-eEEEeeccCCCccEEEEec-C-CCCeEEee---cCCCceEEEEccCCcEEEeeCCCCeEEEee
Q psy6572 564 HNQTNAVGLDFDWVDN-CLYWSDVTMHGSSIRRSCN-N-SQPELLFP---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 564 ~~l~~~~~l~~D~~~~-~LYwtD~~~~~~~I~r~~l-~-s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ 637 (1416)
.....+..|+|.+..+ .|+..... +.|+...+ . .....+.. ...+..|++.+ +.++++-...+.|.+.+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIGSPSFQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVID 128 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEEC
T ss_pred ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEeccCCceEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEc
Confidence 3445678899988877 67666544 37888888 6 33322221 23456788887 55666666778888887
Q ss_pred cCC---------CceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC-CC--CEEEeecCCCCCeeEEeec
Q psy6572 638 LDG---------RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG-SN--PKVIISKNLSWPNALTISY 705 (1416)
Q Consensus 638 ldG---------~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG-s~--r~vlv~~~l~~P~gLaiD~ 705 (1416)
+.. ......+ .....+.+|++.|.. |+..... ..|...++.. .. ...+....-..+..|++.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSSR--LIVGMNN--SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp HHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSSE--EEEEEST--TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred ccccccccccccCCeeeEE-eeCCceEEEEecCCc--EEEEeCC--CeEEEEECCccccccceeeecCCCCceeEEEECC
Confidence 653 1110011 123457788888764 5555432 3677777765 22 2223323334567888876
Q ss_pred CCCeEEEecCCCCeEEEEeCCCC------ceEEEEeccCCCCc---ccccceeEEEe-cCcEEEeecCCCeeEEecccCC
Q psy6572 706 ETNELFWGDAHEDYIAVSDLNGE------NIKIIVSRRMDPTI---NLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 706 ~~~rLYWtD~~~~~I~~~~ldG~------~r~~v~~~~~~p~~---~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
..++++++-...+.|...+++.. .....+........ ......+|++. .+.++++-...+.|...+..++
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 13444444445667777665443 22223332200000 01134566664 3444455555666666665544
Q ss_pred C
Q psy6572 776 K 776 (1416)
Q Consensus 776 ~ 776 (1416)
.
T Consensus 284 ~ 284 (342)
T 1yfq_A 284 K 284 (342)
T ss_dssp E
T ss_pred h
Confidence 4
No 299
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.83 E-value=2 Score=50.23 Aligned_cols=176 Identities=9% Similarity=-0.019 Sum_probs=95.9
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cCCCceEEEEccCCc
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-ATSPDGLTVDWVGRN 622 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~~p~gLAvD~~~~~ 622 (1416)
...|+..++.... ..+......+.+|+|.+.++.|+-.... +.|+..++.+. ...... ...+..+++.+..++
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 220 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCC
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCC
Confidence 3456666665544 2222334557789998877777655433 36777777632 222222 445677888876777
Q ss_pred EEEeeCCCCeEEEeecCCCc-eEEEE------cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCC--------
Q psy6572 623 LYWCDKGLDTIEVAKLDGRF-RKVLI------NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNP-------- 687 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~-~~vLi------~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r-------- 687 (1416)
++.+-...+.|.+.++.... ...+. ........+|++.|...+|+-.... ..|...++.....
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD--RSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT--SEEEEEEC-------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC--CEEEEEECCCCCCcccccCCC
Confidence 77777777888888876543 22221 1223456789999987777655432 2454444432211
Q ss_pred ----EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCC
Q psy6572 688 ----KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 688 ----~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
...+...-.....+++.+....|+ +-...+.|...++...
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSG 342 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTC
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCC
Confidence 111112223345666665433333 3334456666665433
No 300
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.79 E-value=1 Score=57.36 Aligned_cols=215 Identities=7% Similarity=-0.006 Sum_probs=121.1
Q ss_pred EEEEEecCCcc-eEEeccc-------ccceeeeeecCCCeEEEeeccCC--CccEEEEecCCCCeE-EeecCCC--ceEE
Q psy6572 549 YIREVTQAGVM-TIRIHNQ-------TNAVGLDFDWVDNCLYWSDVTMH--GSSIRRSCNNSQPEL-LFPATSP--DGLT 615 (1416)
Q Consensus 549 ~I~~i~l~g~~-~~~~~~l-------~~~~~l~~D~~~~~LYwtD~~~~--~~~I~r~~l~s~~~~-l~~l~~p--~gLA 615 (1416)
.|+++...+.. .+++..- ....++++.+.+++|.++-.... ...|+.+++.+...+ ...+... .+++
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~ 174 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPK 174 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCE
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceE
Confidence 45666655544 4443211 13567888888888776644321 247888888833222 1112222 5677
Q ss_pred EEccCCcEEEeeCC------------CCeEEEeecCCCce-EEEEcCCC---CCcceeeecCCcceEEEeeCCC--CceE
Q psy6572 616 VDWVGRNLYWCDKG------------LDTIEVAKLDGRFR-KVLINKGL---QEPRGIALNPAYGYMYWTDWGQ--NAHI 677 (1416)
Q Consensus 616 vD~~~~~LYwtD~~------------~~~I~v~~ldG~~~-~vLi~~~l---~~P~gIavDp~~g~LYWtD~g~--~~~I 677 (1416)
..+-+..||++... ..+|++.++.+... .+++...- ..-.++++.|...+|+++-+.. ...|
T Consensus 175 wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l 254 (695)
T 2bkl_A 175 WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDV 254 (695)
T ss_dssp ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEE
T ss_pred EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEE
Confidence 77777788887652 23599999876542 23332221 2345889999988888876432 3467
Q ss_pred EEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecC---CCCeEEEEeCCCCce---EEEEeccCCCCcccccceeEE
Q psy6572 678 GKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDA---HEDYIAVSDLNGENI---KIIVSRRMDPTINLHHVFALA 751 (1416)
Q Consensus 678 ~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~---~~~~I~~~~ldG~~r---~~v~~~~~~p~~~l~~P~~la 751 (1416)
+..+..+...+.|.... ......+ ....+ ||+.-. ...+|..+++++... +.|+... + -....+++
T Consensus 255 ~~~~~~~~~~~~l~~~~-~~~~~~~-~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~---~~~l~~~~ 326 (695)
T 2bkl_A 255 YWKRPGEKDFRLLVKGV-GAKYEVH-AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED--S---SASLLSVS 326 (695)
T ss_dssp EEECTTCSSCEEEEECS-SCCEEEE-EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC--S---SCEEEEEE
T ss_pred EEEcCCCCceEEeecCC-CceEEEE-ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC--C---CCeEEEEE
Confidence 77766544445554322 1222222 23344 666532 357899999876542 4554421 0 11234567
Q ss_pred EecCcEEEeecCCC--eeEEec
Q psy6572 752 VFEDHLFWTDWEMK--SIERCD 771 (1416)
Q Consensus 752 v~~d~LYwtD~~~~--~I~~~n 771 (1416)
+++++|+++-...+ .|+.++
T Consensus 327 ~~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 327 IVGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EETTEEEEEEEETTEEEEEEEE
T ss_pred EECCEEEEEEEECCEEEEEEEe
Confidence 77888887765433 344444
No 301
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.78 E-value=0.34 Score=57.79 Aligned_cols=190 Identities=13% Similarity=0.033 Sum_probs=101.5
Q ss_pred ceEecCCCCCeEEE-Ee-cEEEEEEecCCcc-eEEe---cccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-Ce
Q psy6572 531 GCKATSDVPPNLLF-TN-KYYIREVTQAGVM-TIRI---HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PE 603 (1416)
Q Consensus 531 sC~a~~~~~~~li~-s~-~~~I~~i~l~g~~-~~~~---~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~ 603 (1416)
+|.+-.+..+.+|+ +. ...|+..++.... ..++ .....+.+|+|.+.++.++++-... +.|+..++.+. ..
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D--~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME--GTTRLQDFKGNILR 200 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS--SCEEEEETTSCEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC--CEEEEeeccCCcee
Confidence 45555443443333 32 3456666665443 2222 2234578899987655555554433 36777777733 33
Q ss_pred EEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEE
Q psy6572 604 LLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGK 679 (1416)
Q Consensus 604 ~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~r 679 (1416)
++.. ......|++.+. ++++++-...+.|.+.+++|.....+. .......+|++.|...+++.+-... ..|..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d-~~v~i 277 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVD-QTVKI 277 (435)
T ss_dssp EEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETT-SBCCE
T ss_pred EEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCc-ceeeE
Confidence 3333 233567888864 455556666788999999886543332 2334578899999877776654222 23333
Q ss_pred EecCCC-CCEEEee--cCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 680 AKMDGS-NPKVIIS--KNLSWPNALTISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 680 a~mDGs-~r~vlv~--~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
.++... ....++. ..-...++|++.+...+|+- -...+.|...++.
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s-~~~D~~i~iwd~~ 326 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLT-TDQKSEIRVYSAS 326 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEE-EESSSCEEEEESS
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEE-EcCCCEEEEEECC
Confidence 344321 1111111 11223356777654444443 3345566666654
No 302
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.77 E-value=0.0061 Score=54.20 Aligned_cols=18 Identities=39% Similarity=0.864 Sum_probs=12.8
Q ss_pred EEeeCCCceecCCCCCcccc
Q psy6572 476 KCACRKGYQVHPEDKHLCVD 495 (1416)
Q Consensus 476 ~C~C~~Gy~L~p~d~~tC~d 495 (1416)
.+.|++||+|. ++.+|+|
T Consensus 54 ~~~C~~Gy~~~--~~~~C~D 71 (71)
T 2kl7_A 54 PNPCPPGYEPD--DQDSCVD 71 (71)
T ss_dssp CCCSCTTEEEE--CCCCSCC
T ss_pred ccCCCCCeeeC--CCCcccC
Confidence 45799999986 3446764
No 303
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.77 E-value=1.5 Score=56.23 Aligned_cols=195 Identities=11% Similarity=0.033 Sum_probs=111.9
Q ss_pred cceeeeeecCCCeEEEeeccCCC--ccEEEEecCC-CCeEEe-ecCCCceEEEEccCCcEEEeeCC-------------C
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHG--SSIRRSCNNS-QPELLF-PATSPDGLTVDWVGRNLYWCDKG-------------L 630 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~--~~I~r~~l~s-~~~~l~-~l~~p~gLAvD~~~~~LYwtD~~-------------~ 630 (1416)
...++++.+.+++|.++-..... ..|+.+++.+ ...... .-....+++.-+- +.||++... .
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 35577888888888666433211 3588888873 322111 1111245666556 777776543 2
Q ss_pred CeEEEeecCCCc-eEEEEcCCCC---CcceeeecCCcceEEEeeCC---CCceEEEEecCCC--C-CEEEeecCCCCCee
Q psy6572 631 DTIEVAKLDGRF-RKVLINKGLQ---EPRGIALNPAYGYMYWTDWG---QNAHIGKAKMDGS--N-PKVIISKNLSWPNA 700 (1416)
Q Consensus 631 ~~I~v~~ldG~~-~~vLi~~~l~---~P~gIavDp~~g~LYWtD~g---~~~~I~ra~mDGs--~-r~vlv~~~l~~P~g 700 (1416)
.+|++.++.+.. ..+++..... .-.++++.|...+|+++-.. ....|+..++++. . .+.|.... ..-..
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~ 321 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-KAQWD 321 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS-SSCEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC-CceEE
Confidence 358888886543 2233323222 24588899988888877542 2457999998876 4 44444322 11122
Q ss_pred EEeecCCCeEEEecC---CCCeEEEEeCCCC--ceEEEEeccCCCCcccccceeEEEecCcEEEeecCCC--eeEEec
Q psy6572 701 LTISYETNELFWGDA---HEDYIAVSDLNGE--NIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMK--SIERCD 771 (1416)
Q Consensus 701 LaiD~~~~rLYWtD~---~~~~I~~~~ldG~--~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~--~I~~~n 771 (1416)
. +.+..++||+.-. ...+|..+++++. ..+.|+... -....++++++++|+++-...+ .|+.++
T Consensus 322 ~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~------~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES------KDNLESVGIAGNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC------SSEEEEEEEEBTEEEEEEEETTEEEEEEEE
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC------CCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 2 3456788887743 2567999998873 455555432 1123466777888888765443 355554
No 304
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.67 E-value=2.5 Score=48.70 Aligned_cols=234 Identities=9% Similarity=-0.087 Sum_probs=121.8
Q ss_pred CeEEEEe-cEEEEEEecCCcc--------eEEecccccceeeeeecC----C---CeEEEeeccCCCccEEEEecC-CC-
Q psy6572 540 PNLLFTN-KYYIREVTQAGVM--------TIRIHNQTNAVGLDFDWV----D---NCLYWSDVTMHGSSIRRSCNN-SQ- 601 (1416)
Q Consensus 540 ~~li~s~-~~~I~~i~l~g~~--------~~~~~~l~~~~~l~~D~~----~---~~LYwtD~~~~~~~I~r~~l~-s~- 601 (1416)
.+|+.+. ...|+..++.... ..+......+..|+|.+. + ..|+..... +.|+...+. ..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~~~~~ 103 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRITREDE 103 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEEECTT
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEccCCcc
Confidence 3444433 3456655554432 222333445678888876 5 555554433 367777666 32
Q ss_pred -----CeEEeec------CCCceEEEE----ccCCcEEEeeCCCCeEEEeecCC-------CceE-----EEE------c
Q psy6572 602 -----PELLFPA------TSPDGLTVD----WVGRNLYWCDKGLDTIEVAKLDG-------RFRK-----VLI------N 648 (1416)
Q Consensus 602 -----~~~l~~l------~~p~gLAvD----~~~~~LYwtD~~~~~I~v~~ldG-------~~~~-----vLi------~ 648 (1416)
...+... ..+..|++. +.+..++++-...+.|.+.++.. .... .+. .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (397)
T 1sq9_A 104 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 183 (397)
T ss_dssp TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSS
T ss_pred cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecccc
Confidence 1222223 556778888 66666244544567787777664 2222 332 2
Q ss_pred CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec---C---CCCCeeEEeecCCCeEEEecCCC---Ce
Q psy6572 649 KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK---N---LSWPNALTISYETNELFWGDAHE---DY 719 (1416)
Q Consensus 649 ~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~---~---l~~P~gLaiD~~~~rLYWtD~~~---~~ 719 (1416)
.....+..|++.|.. +|+... ....|...++........+.. . -.....|++.+....|+.+. .. +.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~ 259 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGC 259 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEE
T ss_pred CCCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCce
Confidence 334568899999986 555443 234677777764333333333 2 44567889987555555443 33 67
Q ss_pred EEEEeCCCCceEEEEeccCCCCc-------ccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 720 IAVSDLNGENIKIIVSRRMDPTI-------NLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 720 I~~~~ldG~~r~~v~~~~~~p~~-------~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
|...++........+.....+.. .-....+|++. .+.++.+-...+.|...+..++.....
T Consensus 260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEE
Confidence 88888754433333332000000 02234566664 445555555666676666555544333
No 305
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.63 E-value=0.66 Score=59.68 Aligned_cols=180 Identities=16% Similarity=0.189 Sum_probs=104.8
Q ss_pred EEEEEEecCCcce--EEecccccceeeeeecCCCeEEEeeccCC-----------CccEEEEecCCC---CeEEee-cCC
Q psy6572 548 YYIREVTQAGVMT--IRIHNQTNAVGLDFDWVDNCLYWSDVTMH-----------GSSIRRSCNNSQ---PELLFP-ATS 610 (1416)
Q Consensus 548 ~~I~~i~l~g~~~--~~~~~l~~~~~l~~D~~~~~LYwtD~~~~-----------~~~I~r~~l~s~---~~~l~~-l~~ 610 (1416)
..|+.+++.+... ..+... ...++++.+. +.||++..... ...|++..+.+. ..++.. ...
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 4688888877652 211111 1246777777 88888754321 225888887732 234443 222
Q ss_pred ---CceEEEEccCCcEEEeeCC----CCeEEEeecCCC--c-eEEEEcCCCCCcceeeecCCcceEEEeeC-C-CCceEE
Q psy6572 611 ---PDGLTVDWVGRNLYWCDKG----LDTIEVAKLDGR--F-RKVLINKGLQEPRGIALNPAYGYMYWTDW-G-QNAHIG 678 (1416)
Q Consensus 611 ---p~gLAvD~~~~~LYwtD~~----~~~I~v~~ldG~--~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~-g-~~~~I~ 678 (1416)
..++++.+-++.|+++-.. ...|++.++++. . .+.|.. ........ +.|..++||+... + .+.+|.
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP-DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-SSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-CCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence 3577787777778776542 458999998765 3 344442 22222222 3467777777642 2 246899
Q ss_pred EEecCCC--CCEEEeecCCCCCeeEEeecCCCeEEEecCC--CCeEEEEeCCCCceEEE
Q psy6572 679 KAKMDGS--NPKVIISKNLSWPNALTISYETNELFWGDAH--EDYIAVSDLNGENIKII 733 (1416)
Q Consensus 679 ra~mDGs--~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~--~~~I~~~~ldG~~r~~v 733 (1416)
++++++. ..+.|+...-....+++++ .++||++-.. ..+|+.++++|...+.|
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 9999874 3344544322223455554 6788877543 34678888877755443
No 306
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=95.62 E-value=0.0074 Score=61.61 Aligned_cols=42 Identities=36% Similarity=0.786 Sum_probs=37.4
Q ss_pred ccCCcCCCCCccc-eeeecCCeeeecCCCCcEEecCCCceEec
Q psy6572 494 VDTNECLDRPCSH-YCRNTLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 494 ~didEC~~~~Csq-~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
+|||||+..+|.+ +|+|++|+|+|.|++||++..++++|...
T Consensus 2 ~dideC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~ 44 (147)
T 2w86_A 2 ADIDECESSPCINGVCKNSPGSFICECSSESTLDPTKTICIET 44 (147)
T ss_dssp CCCCGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEEC
T ss_pred CcCccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCC
Confidence 4789999788975 99999999999999999999888888764
No 307
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.62 E-value=2.9 Score=48.52 Aligned_cols=226 Identities=8% Similarity=-0.037 Sum_probs=123.0
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC------C---CeEEee-cCCCceE
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS------Q---PELLFP-ATSPDGL 614 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s------~---~~~l~~-l~~p~gL 614 (1416)
...|+..++.... ..+......+..++|.+.++.|...... +.|....+.+ . ..++.. ...+..+
T Consensus 87 D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~ 163 (380)
T 3iz6_a 87 DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSC 163 (380)
T ss_dssp TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCC
T ss_pred CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECCCCccccCCccceeeccCCCcceEEE
Confidence 3455555554433 2233334456788898877776654433 2555555541 0 111222 3345556
Q ss_pred EEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc-----CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC-CCE
Q psy6572 615 TVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN-----KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS-NPK 688 (1416)
Q Consensus 615 AvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~-----~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs-~r~ 688 (1416)
++-+..+.++++-...+.|.+.++.......++. ........+++.+..+.++.+-... ..|..-++... ...
T Consensus 164 ~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 164 QYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-TTVRLWDLRITSRAV 242 (380)
T ss_dssp BCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-SCEEEEETTTTCCCC
T ss_pred EEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-CeEEEEECCCCCcce
Confidence 6666556666777778889888887554433332 1233456788888777777764322 35655555422 222
Q ss_pred EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCC-CcccccceeEEEe-cCcEEEeecCCCe
Q psy6572 689 VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDP-TINLHHVFALAVF-EDHLFWTDWEMKS 766 (1416)
Q Consensus 689 vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p-~~~l~~P~~lav~-~d~LYwtD~~~~~ 766 (1416)
..+...-...+.|++.+ .++++.+-...+.|...++.......++...... ...+....++++. .+.++++-...+.
T Consensus 243 ~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 22333344567899976 4555566566678888887654443333321100 0112224566663 4566666666677
Q ss_pred eEEecccCCCc
Q psy6572 767 IERCDKYTGKN 777 (1416)
Q Consensus 767 I~~~nk~tG~~ 777 (1416)
|..-+..++..
T Consensus 322 i~vwd~~~~~~ 332 (380)
T 3iz6_a 322 CYVWDTLLAEM 332 (380)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 76666554443
No 308
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.59 E-value=0.53 Score=60.17 Aligned_cols=194 Identities=9% Similarity=0.022 Sum_probs=115.4
Q ss_pred cCCCeEEEeeccCC--CccEEEEecC-CCCeEEee---cC-----CCceEEEEccCCcEEEeeCC--CC--eEEEeecCC
Q psy6572 576 WVDNCLYWSDVTMH--GSSIRRSCNN-SQPELLFP---AT-----SPDGLTVDWVGRNLYWCDKG--LD--TIEVAKLDG 640 (1416)
Q Consensus 576 ~~~~~LYwtD~~~~--~~~I~r~~l~-s~~~~l~~---l~-----~p~gLAvD~~~~~LYwtD~~--~~--~I~v~~ldG 640 (1416)
+.++++|++-.... ...|+++... +..++|+. +. ...++++.+-++.|.++-.. .. .|.+.++.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 55777777654322 1256777765 55566654 21 24567888888888776442 22 899999987
Q ss_pred CceEEEEcCCCCCcceeeecCCcceEEEeeCCC--------------CceEEEEecCCCCC-EEEeecC---CCCCeeEE
Q psy6572 641 RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQ--------------NAHIGKAKMDGSNP-KVIISKN---LSWPNALT 702 (1416)
Q Consensus 641 ~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~--------------~~~I~ra~mDGs~r-~vlv~~~---l~~P~gLa 702 (1416)
.....+..... ...+++..|....||++-... ..+|++..+.+... .+++... -.+..+++
T Consensus 161 g~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 65433221121 256789999888888875322 23588888865442 2333222 23456888
Q ss_pred eecCCCeEEEecC-C---CCeEEEEeCCC------C--ceEEEEeccCCCCcccccceeEEEecCcEEEeecC---CCee
Q psy6572 703 ISYETNELFWGDA-H---EDYIAVSDLNG------E--NIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWE---MKSI 767 (1416)
Q Consensus 703 iD~~~~rLYWtD~-~---~~~I~~~~ldG------~--~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~---~~~I 767 (1416)
+.+..++|+++-. . ...|+.+++++ . ..+.|.... -.....+...+++||++... +..|
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~------~~~~~~~s~dg~~l~~~s~~~~~~~~l 313 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF------EGEYDYVTNEGTVFTFKTNRHSPNYRL 313 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS------SSCEEEEEEETTEEEEEECTTCTTCEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC------CcEEEEEeccCCEEEEEECCCCCCCEE
Confidence 9887888887643 1 46889998874 2 344444322 11122344567888876543 3468
Q ss_pred EEecccCCC
Q psy6572 768 ERCDKYTGK 776 (1416)
Q Consensus 768 ~~~nk~tG~ 776 (1416)
+.++..++.
T Consensus 314 ~~~d~~~~~ 322 (710)
T 2xdw_A 314 INIDFTDPE 322 (710)
T ss_dssp EEEETTSCC
T ss_pred EEEeCCCCC
Confidence 877765553
No 309
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.57 E-value=4.4 Score=46.16 Aligned_cols=223 Identities=7% Similarity=-0.050 Sum_probs=119.2
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC---CCeEEee----cCCCceEEEE
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS---QPELLFP----ATSPDGLTVD 617 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s---~~~~l~~----l~~p~gLAvD 617 (1416)
...|+..++.... ..+......+..++|.+.++.|...... +.|+...+.+ ...+... ...+..+++.
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEE
T ss_pred CCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECccCCCcceeEEEecCCCccEEEEEEC
Confidence 3445555554433 2222334456788888877766655443 3666666652 1222222 2334445554
Q ss_pred ccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCC
Q psy6572 618 WVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSW 697 (1416)
Q Consensus 618 ~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~ 697 (1416)
+ +..+++-...+.|.+.++........+........+|++.|...+|+-... ...|...++........+...-..
T Consensus 153 ~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~--d~~v~~wd~~~~~~~~~~~~h~~~ 228 (340)
T 1got_B 153 D--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTFTGHESD 228 (340)
T ss_dssp E--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCSEEEEECCCSSC
T ss_pred C--CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeeEEEEcCCcCC
Confidence 3 333556666778888887654433333344456789999997555544432 235655566543333333333445
Q ss_pred CeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 698 PNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
.++|++.+. ++++.+-...+.|...++........+... .......+|++. .+.++.+-...+.|..-+..++.
T Consensus 229 v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 229 INAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHD----NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCT----TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccC----CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 678899864 444555455677888887654332222211 001234556653 45566666666666666655555
Q ss_pred ceEEE
Q psy6572 777 NCTSV 781 (1416)
Q Consensus 777 ~~~~l 781 (1416)
...++
T Consensus 304 ~~~~~ 308 (340)
T 1got_B 304 RAGVL 308 (340)
T ss_dssp EEEEE
T ss_pred EeeEe
Confidence 44333
No 310
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.53 E-value=0.0064 Score=69.21 Aligned_cols=43 Identities=40% Similarity=0.862 Sum_probs=37.4
Q ss_pred cCCcCC---CCCccceeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 495 DTNECL---DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 495 didEC~---~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
+.|||. ++.|+|+|+|+.++|+|.|++||.|..++++|.+.+.
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~ 46 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 46 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECST
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccc
Confidence 468897 4899999999999999999999999999999998643
No 311
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.50 E-value=0.9 Score=53.06 Aligned_cols=156 Identities=7% Similarity=0.013 Sum_probs=93.7
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEeecCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFPATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLI 647 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi 647 (1416)
..+++|++.++.|+..... +.|+...+.+ .............+++-...++++++-...+.|.+.++.......++
T Consensus 59 ~~~~~~s~~g~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD---GHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEET---TEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccceeeeecCCeEEEEEcC---CcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 3468888888888877654 2676666651 11111111222333333345566666666788888888766554444
Q ss_pred cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC
Q psy6572 648 NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 648 ~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG 727 (1416)
........+|++.|...+|+.+.. ...|...++........+.........|++.+....|+.+ ...+.|...++..
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSA-SLDGTIRLWECGT 212 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTT
T ss_pred ccccCccEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEeECCC
Confidence 445567889999998777766553 2367777776444333344445556789998755555544 4456777777754
Q ss_pred Cce
Q psy6572 728 ENI 730 (1416)
Q Consensus 728 ~~r 730 (1416)
...
T Consensus 213 ~~~ 215 (420)
T 3vl1_A 213 GTT 215 (420)
T ss_dssp TEE
T ss_pred Cce
Confidence 433
No 312
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.38 E-value=3.7 Score=45.88 Aligned_cols=161 Identities=10% Similarity=0.009 Sum_probs=83.5
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeE-Eee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPEL-LFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~-l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
...+..|+|.+.+..|+..... +.|+.......... ... ...+..+++.+....| ++-...+.|.+.++.+..
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~~d---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~s~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGSWD---GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI-VSGSRDKTIKLWNTLGVC 161 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCE
T ss_pred CCCEEEEEECCCCCEEEEEccc---ccceEEeecccceeeeecCCCCceeEEEEeecCccc-eeecCCCeEEEEEeCCCc
Confidence 3456788898877777665544 25666655522221 111 3333444444444443 444455677777776655
Q ss_pred eEEEEcC-CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 643 RKVLINK-GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 643 ~~vLi~~-~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
..++... .......+++.+.....+++..+....|...++........+...-...+.|++.+. ++++++-...+.|.
T Consensus 162 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD-GSLCASGGKDGQAM 240 (340)
T ss_dssp EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTCEEE
T ss_pred eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC-CCEEEEEeCCCeEE
Confidence 5444332 233455666665544333332222335655555543333333323344578888764 44444444456777
Q ss_pred EEeCCCCceE
Q psy6572 722 VSDLNGENIK 731 (1416)
Q Consensus 722 ~~~ldG~~r~ 731 (1416)
..++......
T Consensus 241 iwd~~~~~~~ 250 (340)
T 4aow_A 241 LWDLNEGKHL 250 (340)
T ss_dssp EEETTTTEEE
T ss_pred EEEeccCcee
Confidence 7777654433
No 313
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.35 E-value=0.38 Score=54.86 Aligned_cols=124 Identities=8% Similarity=-0.015 Sum_probs=77.7
Q ss_pred cEEEEecC-CCCeEEeecCCCceEEEEccCCcEEEeeCC----CCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceE
Q psy6572 592 SIRRSCNN-SQPELLFPATSPDGLTVDWVGRNLYWCDKG----LDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYM 666 (1416)
Q Consensus 592 ~I~r~~l~-s~~~~l~~l~~p~gLAvD~~~~~LYwtD~~----~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~L 666 (1416)
.|+.+.+. +....| ..+..+++.+-++.|+++... ...|.+.++++...+.|..... ..+++..|...+|
T Consensus 44 ~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l 118 (347)
T 2gop_A 44 TIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKL 118 (347)
T ss_dssp EEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEE
T ss_pred eEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEE
Confidence 46666665 332233 456677888888888887543 3468899988766555543322 7889999988888
Q ss_pred EEeeCC-------------------------CCceEEEEecCCCCC-EEEeecCCCCCeeEEeecCCCeEEEecCC----
Q psy6572 667 YWTDWG-------------------------QNAHIGKAKMDGSNP-KVIISKNLSWPNALTISYETNELFWGDAH---- 716 (1416)
Q Consensus 667 YWtD~g-------------------------~~~~I~ra~mDGs~r-~vlv~~~l~~P~gLaiD~~~~rLYWtD~~---- 716 (1416)
+++... ...+|++.++++... +.|.. . ....+++.+.. .||.+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~ 194 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIP 194 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSC
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccc
Confidence 877421 125788888877655 44443 2 56678887644 55544332
Q ss_pred ----CCeEEEEe
Q psy6572 717 ----EDYIAVSD 724 (1416)
Q Consensus 717 ----~~~I~~~~ 724 (1416)
...|+.++
T Consensus 195 ~~~~~~~l~~~d 206 (347)
T 2gop_A 195 QYFKFWDIYIWE 206 (347)
T ss_dssp CSSCCEEEEEEE
T ss_pred cccccccEEEeC
Confidence 33677777
No 314
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.31 E-value=0.011 Score=45.82 Aligned_cols=30 Identities=33% Similarity=1.010 Sum_probs=26.6
Q ss_pred cCCcCCCCCccc--eeeecCCeeeecCCCCcE
Q psy6572 495 DTNECLDRPCSH--YCRNTLGSYSCSCAPGYA 524 (1416)
Q Consensus 495 didEC~~~~Csq--~C~nt~gsy~C~C~~Gy~ 524 (1416)
++++|+..+|.+ .|+++.++|+|.|++||.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCc
Confidence 678888788875 799999999999999996
No 315
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.21 E-value=0.53 Score=54.61 Aligned_cols=173 Identities=9% Similarity=0.016 Sum_probs=96.8
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEcc
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWV 619 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~ 619 (1416)
...|+..++.... ..+......+.+|+|.+..+.++.+-... +.|+..++. ........ ...+..|++.+.
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED--GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT--SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC--CceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 3446666665444 22222344567888887776666665543 367777666 22222111 334667888877
Q ss_pred CCcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cCCCC
Q psy6572 620 GRNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KNLSW 697 (1416)
Q Consensus 620 ~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~l~~ 697 (1416)
.++++.+-...+.|.+.++.... ..++ ........+|++.|..+.|..+-. ....|..-+++.. +++.. ..-..
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~lasgs-~D~~i~iwd~~~~--~~~~~~~H~~~ 313 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTS-AVHSQNITGLAYSYHSSPFLASIS-EDCTVAVLDADFS--EVFRDLSHRDF 313 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEE-CCCSSCEEEEEECSSSSCCEEEEE-TTSCEEEECTTSC--EEEEECCCSSC
T ss_pred ccceEEEeecccceeEEECCCCcEeEEE-eccceeEEEEEEcCCCCCEEEEEe-CCCEEEEEECCCC--cEeEECCCCCC
Confidence 88888887777889888876443 3333 234455688999988665544421 2234555555433 22222 12334
Q ss_pred CeeEEeecCCCeEEEecCCCCeEEEEeC
Q psy6572 698 PNALTISYETNELFWGDAHEDYIAVSDL 725 (1416)
Q Consensus 698 P~gLaiD~~~~rLYWtD~~~~~I~~~~l 725 (1416)
.++|++.+..++++.+-...+.|..-++
T Consensus 314 V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 314 VTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 5677776545555544434444544444
No 316
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.21 E-value=0.75 Score=58.75 Aligned_cols=183 Identities=12% Similarity=0.075 Sum_probs=109.9
Q ss_pred EEEEEecCCcc---eEEecccc----cceeeeeecCCCeEEEeeccC-CCccEEEEecC-C--CCeEEee-cCCCceEEE
Q psy6572 549 YIREVTQAGVM---TIRIHNQT----NAVGLDFDWVDNCLYWSDVTM-HGSSIRRSCNN-S--QPELLFP-ATSPDGLTV 616 (1416)
Q Consensus 549 ~I~~i~l~g~~---~~~~~~l~----~~~~l~~D~~~~~LYwtD~~~-~~~~I~r~~l~-s--~~~~l~~-l~~p~gLAv 616 (1416)
.|++..+.... .++..... ...++.+.+.++.|+++.... ....|+.+.++ . ..+.|.. ...... .+
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~ 287 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS-LV 287 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EE
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE-EE
Confidence 36666654433 44444332 246778888888887765432 12378888876 3 3444444 222222 26
Q ss_pred EccCCcEEEeeCC---CCeEEEeecCCCce---EEEEcCCCCCcceeeecCCcceEEEeeC-CCCceEEEEecCCCCCEE
Q psy6572 617 DWVGRNLYWCDKG---LDTIEVAKLDGRFR---KVLINKGLQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKMDGSNPKV 689 (1416)
Q Consensus 617 D~~~~~LYwtD~~---~~~I~v~~ldG~~~---~vLi~~~l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~mDGs~r~v 689 (1416)
++.++.||++... ..+|.++++++... +.|+...-... .+.+..++|+++-. +...+|.+.+++|...+.
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 7778888886543 46899999987543 55664433322 66666778877653 233589999999876555
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecC---CCCeEEEEeCCCCceEEEEe
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDA---HEDYIAVSDLNGENIKIIVS 735 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~---~~~~I~~~~ldG~~r~~v~~ 735 (1416)
|.......-.+++.++..++||++-. .-..|+.+++.+...+++..
T Consensus 365 l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 365 VALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp ECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred eecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 43322223345555555677776632 23689999987766665554
No 317
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.12 E-value=0.15 Score=58.87 Aligned_cols=156 Identities=10% Similarity=0.025 Sum_probs=82.3
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC-C--e-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecC
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ-P--E-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD 639 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~-~--~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld 639 (1416)
...+.+|+|.+.++.|+..... +.|+...+. .. . . .+.. ...+..|++.+.+..|+. -...+.|.+.+++
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAV-GSGARVISVCYFE 130 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETT---SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEE-EESSSCEEECCC-
T ss_pred CceEEEEEEeCCCCEEEEEeCC---CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEE-EecCCeEEEEEEC
Confidence 3456788998877766665543 367777766 22 1 1 1112 445667777775555554 4446788888877
Q ss_pred CCc----eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC--------------C-EEEee--cCCCCC
Q psy6572 640 GRF----RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN--------------P-KVIIS--KNLSWP 698 (1416)
Q Consensus 640 G~~----~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~--------------r-~vlv~--~~l~~P 698 (1416)
... ...+..........|++.|...+|+...... .|...++.... + ..++. ......
T Consensus 131 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (377)
T 3dwl_C 131 QENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR--KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV 208 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS--CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSE
T ss_pred CcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC--EEEEEEEEecccCCCccccccccccchhhhhhcccCCceE
Confidence 553 3344322455688999999876666655332 34444442110 0 11221 222335
Q ss_pred eeEEeecCCCeEEEecCCCCeEEEEeCCCC
Q psy6572 699 NALTISYETNELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 699 ~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
..|++.+...+|+.+. ..+.|...++...
T Consensus 209 ~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAG-HDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEECTTSSCEEEEE-TTTEEC-CEECST
T ss_pred EEEEECCCCCEEEEEe-CCCcEEEEECCCC
Confidence 6788887555555553 3456666665443
No 318
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.11 E-value=1.4 Score=50.99 Aligned_cols=176 Identities=9% Similarity=-0.032 Sum_probs=98.0
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC-eEEe
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP-ELLF 606 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~-~~l~ 606 (1416)
+.+......+|+.+. ...|+..++.... ..+......+..++|.+.+..++.+-... +.|+..++. ... ..+.
T Consensus 132 ~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED--NRILLWDTRCPKPASQIG 209 (344)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT--SCEEEEETTSSSCEEECC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc--cccccccccccceeeeee
Confidence 333333333444332 3456666665544 22222345567889988777777765543 377777776 322 2222
Q ss_pred e---cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC-CceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEec
Q psy6572 607 P---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG-RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKM 682 (1416)
Q Consensus 607 ~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG-~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~m 682 (1416)
. ...+..|++.+..++++.+-...+.|.+.++.. +....+. .......+|++.|....++.+-.. ...|..-++
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~-D~~i~vwd~ 287 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSE-DCSLAVLDS 287 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEET-TSCEEEECT
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeC-CCeEEEEEC
Confidence 1 334667888888888888877788999988764 3344443 334557889999886554444211 224555554
Q ss_pred CCCCCEEEee-cCCCCCeeEEeecCCCeEEEe
Q psy6572 683 DGSNPKVIIS-KNLSWPNALTISYETNELFWG 713 (1416)
Q Consensus 683 DGs~r~vlv~-~~l~~P~gLaiD~~~~rLYWt 713 (1416)
... +++.. ..-...++|++.+.+.+|+.+
T Consensus 288 ~~~--~~~~~~~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 288 SLS--ELFRSQAHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp TCC--EEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred CCC--cEEEEcCCCCCEEEEEEeCCCCeEEEE
Confidence 432 22222 223344667766544455443
No 319
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=94.93 E-value=4.6 Score=50.36 Aligned_cols=236 Identities=10% Similarity=0.052 Sum_probs=125.3
Q ss_pred CCeEEEEecEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEE---ee-cCCC
Q psy6572 539 PPNLLFTNKYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELL---FP-ATSP 611 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l---~~-l~~p 611 (1416)
..+|+++....|+..++.... ..+......+..++|.+.++.|.-.... +.|+..++. .....+ .. ...+
T Consensus 30 g~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d---~~v~lWd~~~~~~~~~~~~~~~~~~v 106 (611)
T 1nr0_A 30 GDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH---GNVRIWDTTQTTHILKTTIPVFSGPV 106 (611)
T ss_dssp SSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEESSSTTCCEEEEEECSSSCE
T ss_pred CCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC---CCEEEeECCCCcceeeEeecccCCce
Confidence 345666665666666665333 3343444567889999877766554443 367777775 222222 22 4567
Q ss_pred ceEEEEccCCcEEEeeCCC---CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE
Q psy6572 612 DGLTVDWVGRNLYWCDKGL---DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 612 ~gLAvD~~~~~LYwtD~~~---~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~ 688 (1416)
.+|++.+.++.|..+.... .+|...+. |....+| .........|++.|...+++.+-... ..|..-++......
T Consensus 107 ~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D-~~v~lwd~~~~~~~ 183 (611)
T 1nr0_A 107 KDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDD-NTVAIFEGPPFKFK 183 (611)
T ss_dssp EEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETT-SCEEEEETTTBEEE
T ss_pred EEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCccee-cCCCCCceEEEECCCCCeEEEEEeCC-CeEEEEECCCCeEe
Confidence 8899998888777665543 24555442 2222222 23344577899998866544443222 23433333221111
Q ss_pred EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCe
Q psy6572 689 VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKS 766 (1416)
Q Consensus 689 vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~ 766 (1416)
..+...-...+.|++.+ .++++.+-...+.|...++ +|....++..........-....+|++. .+.++.|-...+.
T Consensus 184 ~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 262 (611)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe
Confidence 22233345567888876 4555555555667777775 4444333322100000012235677774 4566666666666
Q ss_pred eEEecccCCCceEEE
Q psy6572 767 IERCDKYTGKNCTSV 781 (1416)
Q Consensus 767 I~~~nk~tG~~~~~l 781 (1416)
|..-+..++.....+
T Consensus 263 v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 263 IKIWNVATLKVEKTI 277 (611)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEeCCCCceeeee
Confidence 666665555444333
No 320
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.89 E-value=0.014 Score=61.11 Aligned_cols=33 Identities=27% Similarity=0.749 Sum_probs=28.5
Q ss_pred CcccccccccccCCCCCeEEecCCCceeccCCCCccceeec
Q psy6572 1295 TCSQICIEKKISNTERTFSCHCAEGYHMVHGKNKTSSCVAN 1335 (1416)
Q Consensus 1295 ~Csq~C~n~~~~n~~gs~~C~C~~gy~~~~~~~~~~~Cka~ 1335 (1416)
.|+|.|+|+. |+|+|.|.+||+|..+ +++|++.
T Consensus 136 ~C~~~C~n~~-----g~~~C~C~~Gy~l~~d---~~~C~~~ 168 (170)
T 1szb_A 136 TCDHHCHNHL-----GGFYCSCRAGYVLHRN---KRTCSEQ 168 (170)
T ss_dssp SSSSEEEEET-----TEEEEECCTTEEECTT---SSCEEEC
T ss_pred ccCCccccCC-----CCEEEeCCCCcEECCC---CCccccc
Confidence 3999998777 9999999999999987 4689874
No 321
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.88 E-value=3.6 Score=47.22 Aligned_cols=218 Identities=6% Similarity=-0.070 Sum_probs=110.2
Q ss_pred cEEEEEEecCCcc-eEEecccccceeeeeecCCC--eEEEeeccCCCccEEEEecC-CC-CeEEee-cCCCceEEEEccC
Q psy6572 547 KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDN--CLYWSDVTMHGSSIRRSCNN-SQ-PELLFP-ATSPDGLTVDWVG 620 (1416)
Q Consensus 547 ~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~--~LYwtD~~~~~~~I~r~~l~-s~-~~~l~~-l~~p~gLAvD~~~ 620 (1416)
...|+..++.... .........+..+.+.+... .++++-... +.|+.+.+. .. ...+.. ...+..|++.+.+
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG--PKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS--SSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC--CeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 4556666666554 22233334455666655432 233333332 367777777 32 233333 4567789998888
Q ss_pred CcEEEeeCCCCeEEEeecCCCc--eEEEE--------------cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 621 RNLYWCDKGLDTIEVAKLDGRF--RKVLI--------------NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 621 ~~LYwtD~~~~~I~v~~ldG~~--~~vLi--------------~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
..|+++-...+.|.+.++.... ...+. ........+|++.|...+|+..... ..|...++..
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~ 276 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD--NRMRLWNSSN 276 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTT
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC--CeEEEEECCC
Confidence 8788787777888888876433 11110 1123446789999986677766532 3566666654
Q ss_pred CCCEEEeecC----CCCCeeEEeecC-CCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEE
Q psy6572 685 SNPKVIISKN----LSWPNALTISYE-TNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLF 758 (1416)
Q Consensus 685 s~r~vlv~~~----l~~P~gLaiD~~-~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LY 758 (1416)
.....+.... ...+..+.+... ...++++ ...+.|...++........+... .....+|++. .+.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~d~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV-PYGSTIAVYTVYSGEQITMLKGH------YKTVDCCVFQSNFQEL 349 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE-EETTEEEEEETTTCCEEEEECCC------SSCEEEEEEETTTTEE
T ss_pred CccceeccccccccccccceeEEecCCCceEEEE-ecCCEEEEEECcCCcceeeeccC------CCeEEEEEEcCCCCEE
Confidence 3322221111 011111111111 2223322 23456777776443333333322 2334566664 34555
Q ss_pred EeecCCCeeEEecccCC
Q psy6572 759 WTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 759 wtD~~~~~I~~~nk~tG 775 (1416)
++-...+.|..-+..++
T Consensus 350 ~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 350 YSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEETTSCEEEEEECC-
T ss_pred EEECCCCeEEEEeCCCC
Confidence 55555555555444333
No 322
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.88 E-value=5.2 Score=45.12 Aligned_cols=181 Identities=11% Similarity=-0.046 Sum_probs=100.0
Q ss_pred CeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee-cCCCceE
Q psy6572 540 PNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP-ATSPDGL 614 (1416)
Q Consensus 540 ~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~-l~~p~gL 614 (1416)
.+|+.+. ...|+..++.... ..+......+.+|+|.+....|+-.... +.|+...+.+. ...+.. ...+..+
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIKGQCLATLLGHNDWVSQV 154 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETTSCEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeEEEEeccCCcEEEE
Confidence 3444332 4567776765544 2333344567788898876666554433 36777766622 222222 3344556
Q ss_pred EEEcc-----CCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEE
Q psy6572 615 TVDWV-----GRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKV 689 (1416)
Q Consensus 615 AvD~~-----~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~v 689 (1416)
++-+. .+.++++-...+.|.+.++........+.........|++.|...+|.-... ...|..-++.......
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~--dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK--DGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET--TCEEEEEETTTTEEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcEEE
Confidence 66543 2345666667778888888755443333344456789999998666655542 2356666665433222
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCC
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGE 728 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~ 728 (1416)
.+. .-.....|++.+....|..+.. ..|...+++..
T Consensus 233 ~~~-~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~~ 268 (319)
T 3frx_A 233 TLS-AQDEVFSLAFSPNRYWLAAATA--TGIKVFSLDPQ 268 (319)
T ss_dssp EEE-CCSCEEEEEECSSSSEEEEEET--TEEEEEEETTE
T ss_pred Eec-CCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeCcC
Confidence 222 2234578888876555555443 34555555543
No 323
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.87 E-value=2 Score=48.57 Aligned_cols=113 Identities=8% Similarity=-0.062 Sum_probs=70.7
Q ss_pred ccceeeeeecCC---CeEEEeeccCCCccEEEEecC-CCC-eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVD---NCLYWSDVTMHGSSIRRSCNN-SQP-ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~---~~LYwtD~~~~~~~I~r~~l~-s~~-~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+.+++|.+.. +.++++-... +.|+...+. ... ..+.. ...+.+|++.+..++++++-...+.|.+.++..
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSR--GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETT--CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCC--CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 446778887763 2344443332 378877777 322 22222 556778888875677777777778999999875
Q ss_pred CceEEEE---cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC
Q psy6572 641 RFRKVLI---NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 641 ~~~~vLi---~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD 683 (1416)
......+ ......+.+|++.|...+|+.+... ..|...++.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~ 191 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD--HSLKLWRIN 191 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT--SCEEEEESC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCC--CCEEEEECC
Confidence 5443333 2345568899999987777666533 245555554
No 324
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.80 E-value=1.8 Score=48.89 Aligned_cols=195 Identities=7% Similarity=-0.103 Sum_probs=103.3
Q ss_pred ccceeeeeecCCCeEEEeeccC-CCccEEEEecC-CCCeEEee---cCCCceEEEEccC--CcEEEeeCCCCeEEEeecC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTM-HGSSIRRSCNN-SQPELLFP---ATSPDGLTVDWVG--RNLYWCDKGLDTIEVAKLD 639 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~-~~~~I~r~~l~-s~~~~l~~---l~~p~gLAvD~~~--~~LYwtD~~~~~I~v~~ld 639 (1416)
..+.+|+|.+.+..|+.+-... ..+.|+...+. .....+.. ...+..|++.+.. +.++++-...+.|.+.++.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 3567788887776666554320 01367777666 33222222 4556777777663 4666666667888888887
Q ss_pred CCc--eEEEEcCCCCCccee------eecCCcceEEEeeCCCCceEEEEecCCCC-CEEEeecC----CCCCeeEE----
Q psy6572 640 GRF--RKVLINKGLQEPRGI------ALNPAYGYMYWTDWGQNAHIGKAKMDGSN-PKVIISKN----LSWPNALT---- 702 (1416)
Q Consensus 640 G~~--~~vLi~~~l~~P~gI------avDp~~g~LYWtD~g~~~~I~ra~mDGs~-r~vlv~~~----l~~P~gLa---- 702 (1416)
... ...+. .......+| ++.|...+|+..... ..|...++.... ....+... ......++
T Consensus 99 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 99 APEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRD--GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp SCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETT--SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred CCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCC--CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 543 33332 333344555 566776666665532 356666665543 22222211 11234455
Q ss_pred eecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe----cCcEEEeecCCCeeEEecc
Q psy6572 703 ISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF----EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 703 iD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~----~d~LYwtD~~~~~I~~~nk 772 (1416)
+.+ .++++++-...+.|...++........... -....+|++. .+.++++-...+.|...+.
T Consensus 176 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 176 YNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNI-------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CC--CCCEEEEEETTSEEEEEETTTTEEEEEEEC-------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred cCC-CCCEEEEEccCCeEEEEECccCceeeecCC-------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 333 455555555567888888776554333221 2334566664 4555555555566555443
No 325
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.76 E-value=1.4 Score=49.83 Aligned_cols=157 Identities=7% Similarity=-0.006 Sum_probs=89.4
Q ss_pred cccceeeeeecC----CCeEEEeeccCCCccEEEEecC-C-CCeEEee------cCCCceEEEEccC---CcEEEeeCCC
Q psy6572 566 QTNAVGLDFDWV----DNCLYWSDVTMHGSSIRRSCNN-S-QPELLFP------ATSPDGLTVDWVG---RNLYWCDKGL 630 (1416)
Q Consensus 566 l~~~~~l~~D~~----~~~LYwtD~~~~~~~I~r~~l~-s-~~~~l~~------l~~p~gLAvD~~~---~~LYwtD~~~ 630 (1416)
...+.+|+|.+. ...|+.+... +.|....+. . ....+.. ...+..|++.+.. +.++++-...
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~---~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGS---NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEET---TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCceEEEEEecccCCCCceEEEECCC---CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 345667888763 3334444333 256666666 2 2233332 1446677887663 4566676677
Q ss_pred CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEe---ecCCCCCeeEEeecCC
Q psy6572 631 DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVII---SKNLSWPNALTISYET 707 (1416)
Q Consensus 631 ~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv---~~~l~~P~gLaiD~~~ 707 (1416)
+.|.+.++........+........+|++.|..+.++++-.. ...|...++........+ ...-.....|++.+..
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-CCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 899999987544333333455678899999944444444322 235666676644333333 2234456788888755
Q ss_pred CeEEEecCCCCeEEEEeCCC
Q psy6572 708 NELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ldG 727 (1416)
..|+.+ ...+.|...++..
T Consensus 174 ~~l~~~-~~dg~i~i~d~~~ 192 (366)
T 3k26_A 174 EKIMSC-GMDHSLKLWRINS 192 (366)
T ss_dssp SEEEEE-ETTSCEEEEESCS
T ss_pred CEEEEe-cCCCCEEEEECCC
Confidence 555444 3456677777653
No 326
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.74 E-value=5.6 Score=43.65 Aligned_cols=190 Identities=10% Similarity=0.025 Sum_probs=100.9
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceE
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRK 644 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~ 644 (1416)
...+..|+++ .+.|+..... +.|+..........+.. ...+..+++.+..++++++-...+.|.+.+. +....
T Consensus 104 ~~~i~~~~~~--~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~ 177 (313)
T 3odt_A 104 QGNVCSLSFQ--DGVVISGSWD---KTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN-DKVIK 177 (313)
T ss_dssp SSCEEEEEEE--TTEEEEEETT---SEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET-TEEEE
T ss_pred ccCEEEEEec--CCEEEEEeCC---CCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec-CceEE
Confidence 3445666663 4444444333 25665552221122222 4455677777756777777777778888772 22233
Q ss_pred EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEe
Q psy6572 645 VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSD 724 (1416)
Q Consensus 645 vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ 724 (1416)
.+..........|++.|... |+.... ...|...++........+.........|++.+.. +|+. -...+.|...+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~dg~v~iwd 252 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSN--DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVS-CGEDRTVRIWS 252 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEE-EETTSEEEEEC
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccC--CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEE-EecCCEEEEEE
Confidence 33322455678888888755 444432 3367777776444333344344556788887644 5544 34567788888
Q ss_pred CCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecc
Q psy6572 725 LNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 725 ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk 772 (1416)
+........+... .....+|++..+.-+++-...+.|...+.
T Consensus 253 ~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 253 KENGSLKQVITLP------AISIWSVDCMSNGDIIVGSSDNLVRIFSQ 294 (313)
T ss_dssp TTTCCEEEEEECS------SSCEEEEEECTTSCEEEEETTSCEEEEES
T ss_pred CCCCceeEEEecc------CceEEEEEEccCCCEEEEeCCCcEEEEeC
Confidence 6544433333322 23345666643322344444455544443
No 327
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.66 E-value=4.9 Score=44.53 Aligned_cols=190 Identities=7% Similarity=-0.035 Sum_probs=92.0
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc---e---EEecccccceeeeeecC--CCeEEEeeccCCCccEEEEecCCC-
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM---T---IRIHNQTNAVGLDFDWV--DNCLYWSDVTMHGSSIRRSCNNSQ- 601 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~---~---~~~~~l~~~~~l~~D~~--~~~LYwtD~~~~~~~I~r~~l~s~- 601 (1416)
+.+......+|+.+. ...|+..++.... . .+......+.+|+|.+. .+.|+..... +.|+...+.+.
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---g~v~vwd~~~~~ 92 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---KTVKLWEEDPDQ 92 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEECTTS
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC---CeEEEEecCCCc
Confidence 334333334444443 3456555555322 1 12234455778888774 4444443332 36777776621
Q ss_pred C-------eEEee----cCCCceEEEEccC-CcEEEeeCCCCeEEEeecCCCc-eEE------EEc------CCCCCcce
Q psy6572 602 P-------ELLFP----ATSPDGLTVDWVG-RNLYWCDKGLDTIEVAKLDGRF-RKV------LIN------KGLQEPRG 656 (1416)
Q Consensus 602 ~-------~~l~~----l~~p~gLAvD~~~-~~LYwtD~~~~~I~v~~ldG~~-~~v------Li~------~~l~~P~g 656 (1416)
. +.+.. ...+.+|++.+.. ++++++-...+.|.+.++.... ... +.. ........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred ccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence 1 22222 4456778887762 4455555566788888865332 100 000 23344667
Q ss_pred eeecCC---cceEEEeeCCCCceEEEEecCCCCCEEEee--cCCCCCeeEEeecCCC---eEEEecCCCCeEEEEeCC
Q psy6572 657 IALNPA---YGYMYWTDWGQNAHIGKAKMDGSNPKVIIS--KNLSWPNALTISYETN---ELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 657 IavDp~---~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~--~~l~~P~gLaiD~~~~---rLYWtD~~~~~I~~~~ld 726 (1416)
|++.|. ..+|+.+.. .. .|............+.. ..-.....|++.+... +++.+-...+.|...++.
T Consensus 173 ~~~~p~~~~~~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSAL-EQ-AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EEECCCSSSCCEEEEEET-TE-EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred EEeccCCCCCcEEEEecC-CC-cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 777775 444444442 22 33222222222111211 2233456788876542 455554455666666654
No 328
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.59 E-value=8.4 Score=44.19 Aligned_cols=224 Identities=8% Similarity=-0.015 Sum_probs=117.0
Q ss_pred EEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-C-------CCeEEee-cCCCceEEE
Q psy6572 548 YYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S-------QPELLFP-ATSPDGLTV 616 (1416)
Q Consensus 548 ~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s-------~~~~l~~-l~~p~gLAv 616 (1416)
..|+..+..... ..+......+.+++|.+.+..|.-.... +.|....+. . ....+.. ...+..+++
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 345554443332 2222334456788898877766554433 255555544 1 1112222 445567777
Q ss_pred EccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCC-cceEEEeeCCCCceEEEEecCCCCCEEEeecCC
Q psy6572 617 DWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPA-YGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNL 695 (1416)
Q Consensus 617 D~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~-~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l 695 (1416)
.+.+..|+ +-...++|.+.++........+.........+++.|. .|.++++-. ....|..-++........+...-
T Consensus 163 ~~~~~~l~-t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs-~Dg~v~~wd~~~~~~~~~~~~h~ 240 (354)
T 2pbi_B 163 TNSDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG-CDKKAMVWDMRSGQCVQAFETHE 240 (354)
T ss_dssp CSSSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE-TTSCEEEEETTTCCEEEEECCCS
T ss_pred eCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe-CCCeEEEEECCCCcEEEEecCCC
Confidence 76554444 5566788888887644332223233345667888775 344444432 22356666665443333333334
Q ss_pred CCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccC
Q psy6572 696 SWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYT 774 (1416)
Q Consensus 696 ~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~t 774 (1416)
...++|++.+.. .++.+-...+.|...++.......++... .......++++. .+.++.+-...+.|..-+..+
T Consensus 241 ~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 241 SDVNSVRYYPSG-DAFASGSDDATCRLYDLRADREVAIYSKE----SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCT----TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCC----CcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 456788887644 44444445567777787654333333321 012233455553 455666655666666666555
Q ss_pred CCceEEE
Q psy6572 775 GKNCTSV 781 (1416)
Q Consensus 775 G~~~~~l 781 (1416)
|....++
T Consensus 316 ~~~~~~l 322 (354)
T 2pbi_B 316 GSRVSIL 322 (354)
T ss_dssp CSEEEEE
T ss_pred CceEEEE
Confidence 6544333
No 329
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.59 E-value=7.5 Score=43.59 Aligned_cols=224 Identities=10% Similarity=-0.067 Sum_probs=113.8
Q ss_pred CCeEEEEe-----cEEEEEEecCCcc---eEEecccccceeeeeecCC---CeEEEeeccCCCccEEEEecC-CC--CeE
Q psy6572 539 PPNLLFTN-----KYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVD---NCLYWSDVTMHGSSIRRSCNN-SQ--PEL 604 (1416)
Q Consensus 539 ~~~li~s~-----~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~---~~LYwtD~~~~~~~I~r~~l~-s~--~~~ 604 (1416)
.+.++++. ...|+..++.+.. .........+.+|+|.+.. +.|+..... +.|+...+. .. ...
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~ 106 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLEAPEMPVYS 106 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTTSCSSCSEE
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCCCCCccEEE
Confidence 34455444 4567766666544 2222344567888998873 555554433 368887777 22 223
Q ss_pred Eee-cCCCceEEEEc-----cCCcEEEeeCCCCeEEEeecCCCc--eEEEEcCC---CCCcceee----ecCCcceEEEe
Q psy6572 605 LFP-ATSPDGLTVDW-----VGRNLYWCDKGLDTIEVAKLDGRF--RKVLINKG---LQEPRGIA----LNPAYGYMYWT 669 (1416)
Q Consensus 605 l~~-l~~p~gLAvD~-----~~~~LYwtD~~~~~I~v~~ldG~~--~~vLi~~~---l~~P~gIa----vDp~~g~LYWt 669 (1416)
+.. ...+..|++-+ ..++++++-...+.|.+.++.... ...+.... ......++ +.|...+|+.+
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 322 33444453321 234455555566788888876543 33332211 12345555 55665555555
Q ss_pred eCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeec---CCCeEEEecCCCCeEEEEeCCCC-ceEEEE----eccCCCC
Q psy6572 670 DWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISY---ETNELFWGDAHEDYIAVSDLNGE-NIKIIV----SRRMDPT 741 (1416)
Q Consensus 670 D~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~---~~~rLYWtD~~~~~I~~~~ldG~-~r~~v~----~~~~~p~ 741 (1416)
.. ...|...++........ ...-.....|++.+ ....|+.+ ...+.|...++... ....+. ...
T Consensus 187 ~~--d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~---- 258 (357)
T 3i2n_A 187 YD--NGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAH---- 258 (357)
T ss_dssp ET--TSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECC----
T ss_pred cc--CCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCC----
Confidence 42 23677777765543222 22334567888876 44444444 45566766665321 111111 111
Q ss_pred cccccceeEEEec-Cc-EEEeecCCCeeEEecccCC
Q psy6572 742 INLHHVFALAVFE-DH-LFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 742 ~~l~~P~~lav~~-d~-LYwtD~~~~~I~~~nk~tG 775 (1416)
.....+|++.. +. ++++-...+.|...+..++
T Consensus 259 --~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 259 --KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp --SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred --cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 23345666643 33 5666666666655544433
No 330
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.58 E-value=5.2 Score=44.28 Aligned_cols=113 Identities=9% Similarity=-0.079 Sum_probs=67.1
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCC--CC-eEEee----cCCCceEEEEcc-CCcEEEeeCCCCeEEEee
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS--QP-ELLFP----ATSPDGLTVDWV-GRNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s--~~-~~l~~----l~~p~gLAvD~~-~~~LYwtD~~~~~I~v~~ 637 (1416)
...+..|+|.+.++.|+..... +.|+...+.+ .. +.+.. ...+..|++.+. .++++++-...+.|.+.+
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSD---QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETT---SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccceeEEEEcCCCCEEEEeeCC---CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 3456788888876666655433 3677666662 11 22222 345667777664 366667766778888888
Q ss_pred cCCCc--------e-EEEEcCCCCCcceeeecCC--cceEEEeeCCCCceEEEEecC
Q psy6572 638 LDGRF--------R-KVLINKGLQEPRGIALNPA--YGYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 638 ldG~~--------~-~vLi~~~l~~P~gIavDp~--~g~LYWtD~g~~~~I~ra~mD 683 (1416)
+.... . ...+........+|++.|. ..+|+.+... ..|...++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--g~v~iwd~~ 142 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--GILRLYDAL 142 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--CEEEEEECS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--CcEEEecCC
Confidence 87542 1 2222234456789999998 5556655532 355555554
No 331
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.57 E-value=2.4 Score=49.83 Aligned_cols=214 Identities=9% Similarity=0.035 Sum_probs=112.2
Q ss_pred cccccceeeeeecCCCeEEEeeccCCCccEEEEecC----CCCeE------Eee--c----CCCceEEEEc---cCCcEE
Q psy6572 564 HNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN----SQPEL------LFP--A----TSPDGLTVDW---VGRNLY 624 (1416)
Q Consensus 564 ~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~----s~~~~------l~~--l----~~p~gLAvD~---~~~~LY 624 (1416)
.....+.+|+|.+..+.|+..... +.|+...+. +.... +.. + .....+++.+ ..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKD---GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETT---SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 345567889998866666655443 256555552 11111 111 1 1122222221 235566
Q ss_pred EeeCCCCeEEEeecCCCce-EEEEcC-CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cCCCCCeeE
Q psy6572 625 WCDKGLDTIEVAKLDGRFR-KVLINK-GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KNLSWPNAL 701 (1416)
Q Consensus 625 wtD~~~~~I~v~~ldG~~~-~vLi~~-~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~l~~P~gL 701 (1416)
++-...+.|.+.++..... .++... ......+|++.|...+|+..... ..|...++........+. ..-.....|
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR--GIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT--SCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC--CeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 6666678899998865443 333321 34578899999986666666533 245555554321111111 111223455
Q ss_pred Eeec---CCCeEEEecCCCCeEEEEeCCC-CceEEEEeccCCCCc-------------------ccccceeEEEecCcEE
Q psy6572 702 TISY---ETNELFWGDAHEDYIAVSDLNG-ENIKIIVSRRMDPTI-------------------NLHHVFALAVFEDHLF 758 (1416)
Q Consensus 702 aiD~---~~~rLYWtD~~~~~I~~~~ldG-~~r~~v~~~~~~p~~-------------------~l~~P~~lav~~d~LY 758 (1416)
++.+ ..++++++-...+.|...++.. ...+.+......+.. ......+|++..+.++
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l 343 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKIL 343 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEE
Confidence 4443 2344555555566788888754 333333321110000 0112456777767777
Q ss_pred EeecCCCeeEEecccCCCceEEEE
Q psy6572 759 WTDWEMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 759 wtD~~~~~I~~~nk~tG~~~~~l~ 782 (1416)
++-...+.|..-+..++....++.
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EecCCCCeEEEEECCCcccceEEe
Confidence 777777888877777776666554
No 332
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.56 E-value=2.1 Score=58.26 Aligned_cols=232 Identities=10% Similarity=-0.001 Sum_probs=130.8
Q ss_pred CCCCeEEEEecEEEEEEecCCcc---eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe--EEee-cCC
Q psy6572 537 DVPPNLLFTNKYYIREVTQAGVM---TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE--LLFP-ATS 610 (1416)
Q Consensus 537 ~~~~~li~s~~~~I~~i~l~g~~---~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~--~l~~-l~~ 610 (1416)
+...+++++....|+.+++.... .+.......+..++|.+.+..|+..... +.|....+.+... .+.. ...
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ---YCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS---SCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceeeecCCCccc
Confidence 33456666666777777776554 2222345567788998887777766544 3677777763222 1222 556
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCC------------------------------ceEEEEc-------CCCCC
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR------------------------------FRKVLIN-------KGLQE 653 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~------------------------------~~~vLi~-------~~l~~ 653 (1416)
+.+|++.+.+..|+ +-...+.|.+.++.+. ...++.. .....
T Consensus 885 v~~v~~spdg~~l~-s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFL-TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQ 963 (1249)
T ss_dssp EEEEEECTTSSEEE-EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSC
T ss_pred eEEEEECCCCCEEE-EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCc
Confidence 77888887555444 4445556666554310 0000000 01234
Q ss_pred cceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEE
Q psy6572 654 PRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 654 P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v 733 (1416)
...+++.|...+|+..... ..|...++........+...-....+|++.+....|+.+ ...+.|...++.......+
T Consensus 964 i~~~~~sp~g~~l~~g~~~--g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~-~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDED--GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISS-SEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp EEEEEECTTSSEEEEEETT--SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEE-CSSSBEEEEETTTTEEECC
T ss_pred EEEEEEcCCCCEEEEEcCC--CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCceEEE
Confidence 6678888887777776633 356666665544444443344556788998755555544 4456777777765443322
Q ss_pred EeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEEE
Q psy6572 734 VSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 734 ~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~ 782 (1416)
. .. .....++++..+..+++-...+.|...+..+|.....+.
T Consensus 1041 ~-~~------~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1041 Q-AH------QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp B-CC------SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred e-cC------CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 1 11 233456666555555565566677766666666555443
No 333
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=94.53 E-value=0.13 Score=63.31 Aligned_cols=105 Identities=19% Similarity=0.182 Sum_probs=75.2
Q ss_pred cccceeeeeecCCCeEEEeeccCC-------------------CccEEEEecC-CC-------CeEEe------------
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMH-------------------GSSIRRSCNN-SQ-------PELLF------------ 606 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~-------------------~~~I~r~~l~-s~-------~~~l~------------ 606 (1416)
+..|..+++++.++.||++-++.. .+.|+|+... +. .++++
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 346889999999999999854321 2568888764 11 22222
Q ss_pred ----------e-cCCCceEEEEccCCcEEE-eeCC-----------CCeEEEeecC-CCceEEEEcCCCCCcceeeecCC
Q psy6572 607 ----------P-ATSPDGLTVDWVGRNLYW-CDKG-----------LDTIEVAKLD-GRFRKVLINKGLQEPRGIALNPA 662 (1416)
Q Consensus 607 ----------~-l~~p~gLAvD~~~~~LYw-tD~~-----------~~~I~v~~ld-G~~~~vLi~~~l~~P~gIavDp~ 662 (1416)
. +..|.+|+||. .++||+ ||.. .+.|+++..+ |..++++.......|.||++.|.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred ccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC
Confidence 1 57799999996 588999 8864 2378888875 55555554345678999999999
Q ss_pred cceEEEeeC
Q psy6572 663 YGYMYWTDW 671 (1416)
Q Consensus 663 ~g~LYWtD~ 671 (1416)
...||++-.
T Consensus 542 ~ktLfV~vQ 550 (592)
T 4a9v_A 542 QKTLFVGIQ 550 (592)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999999864
No 334
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.40 E-value=6.2 Score=44.88 Aligned_cols=161 Identities=9% Similarity=-0.057 Sum_probs=88.5
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-C-eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCce
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-P-ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFR 643 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~-~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~ 643 (1416)
..+..+.|... +.|+..... +.|+..++.+. . .++.. ...+..|++.+. +.++.+-...+.|.+.++.....
T Consensus 144 ~~v~~~~~~~~-~~l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sg~~d~~v~~wd~~~~~~ 218 (340)
T 1got_B 144 GYLSCCRFLDD-NQIVTSSGD---TTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp SCEEEEEEEET-TEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCSE
T ss_pred ccEEEEEECCC-CcEEEEECC---CcEEEEECCCCcEEEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCee
Confidence 34455666443 344433222 36777776622 1 12222 445677888764 45666766778899888765443
Q ss_pred EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cC-CCCCeeEEeecCCCeEEEecCCCCeEE
Q psy6572 644 KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KN-LSWPNALTISYETNELFWGDAHEDYIA 721 (1416)
Q Consensus 644 ~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~-l~~P~gLaiD~~~~rLYWtD~~~~~I~ 721 (1416)
...+........+|++.|...+|+.... ...|...++........+. .. ......|++.+ .++++.+-...+.|.
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNAFATGSD--DATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCN 295 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred EEEEcCCcCCEEEEEEcCCCCEEEEEcC--CCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEE
Confidence 3333344556789999998666655542 2356665665432222221 11 22346788876 445555545567788
Q ss_pred EEeCCCCceEEEEe
Q psy6572 722 VSDLNGENIKIIVS 735 (1416)
Q Consensus 722 ~~~ldG~~r~~v~~ 735 (1416)
..++........+.
T Consensus 296 vwd~~~~~~~~~~~ 309 (340)
T 1got_B 296 VWDALKADRAGVLA 309 (340)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEEcccCcEeeEee
Confidence 77765444433333
No 335
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.31 E-value=0.025 Score=58.33 Aligned_cols=42 Identities=33% Similarity=0.664 Sum_probs=33.7
Q ss_pred ccccccCC-CCCCcccccceecCCceEEeeCCCceecCCCCCcccc
Q psy6572 451 FVNECNVS-HGGQLCAHECIDLKIGYKCACRKGYQVHPEDKHLCVD 495 (1416)
Q Consensus 451 ~i~eC~~~-~~~~~Cs~~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d 495 (1416)
+++||... ... |+|.|.+++++|+|.|++||.|. .++++|++
T Consensus 116 d~~eC~~~~~~~--C~~~C~n~~g~~~C~C~~Gy~l~-~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVP--CSHFCNNFIGGYFCSCPPEYFLH-DDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCC--SSSEEEEETTEEEEECCTTCEEC-TTSSCEEC
T ss_pred cCcccCCCCCCC--CCCcccCcCCCEEEecCCCcEEC-CCCCcccc
Confidence 45677532 234 99999999999999999999998 78888875
No 336
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.24 E-value=8.6 Score=43.25 Aligned_cols=158 Identities=11% Similarity=0.026 Sum_probs=90.4
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
...+..++|.+.++.|+-.... +.|+..++.+.. ..+.. ...+..|++.+.+ .++.+-...+.|.+.++.+..
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s~D---~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~ 140 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSASWD---KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQC 140 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSCE
T ss_pred cccEEEEEECCCCCEEEEEeCC---CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCe
Confidence 3456678888777666655443 367777776321 22222 4556778887644 455566667889999988776
Q ss_pred eEEEEcCCCCCcceeeecCCcc-----eEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCC
Q psy6572 643 RKVLINKGLQEPRGIALNPAYG-----YMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHE 717 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g-----~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~ 717 (1416)
...+. ........+++.|... .++++- +....|..-++........+...-...+.|++.+ .++++.+-...
T Consensus 141 ~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~d 217 (319)
T 3frx_A 141 LATLL-GHNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKD 217 (319)
T ss_dssp EEEEC-CCSSCEEEEEECCC------CCEEEEE-ETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETT
T ss_pred EEEEe-ccCCcEEEEEEccCCCCCCCccEEEEE-eCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCC
Confidence 55554 3344566777777532 233332 2223455555543322222223334457888876 44544454456
Q ss_pred CeEEEEeCCCCce
Q psy6572 718 DYIAVSDLNGENI 730 (1416)
Q Consensus 718 ~~I~~~~ldG~~r 730 (1416)
+.|...++.....
T Consensus 218 g~i~iwd~~~~~~ 230 (319)
T 3frx_A 218 GEIMLWNLAAKKA 230 (319)
T ss_dssp CEEEEEETTTTEE
T ss_pred CeEEEEECCCCcE
Confidence 7788888765443
No 337
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.16 E-value=3.4 Score=47.59 Aligned_cols=156 Identities=11% Similarity=-0.018 Sum_probs=90.1
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CC-eEEee-cCCCceEEEEcc-CCcEEEeeCCCCeEEEeecCC
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QP-ELLFP-ATSPDGLTVDWV-GRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~-~~l~~-l~~p~gLAvD~~-~~~LYwtD~~~~~I~v~~ldG 640 (1416)
....+.+++|.+....|+-.... +.|+..++.+ .. .++.. ...+..+++.+. .++++++-...++|.+.++..
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D---~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGD---GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred cCCcEEEEEEeCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 33456678887777666654433 3677777762 22 22222 344556677654 356777777788899998865
Q ss_pred CceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec-C-CCCCeeEEeecCCCeEEEecCCCC
Q psy6572 641 RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK-N-LSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 641 ~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~-~-l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
......+........+|++.|...+|+-.... ..|...++.......++.. . ......+++.+. +++..+-...+
T Consensus 230 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~l~~g~~d~ 306 (354)
T 2pbi_B 230 GQCVQAFETHESDVNSVRYYPSGDAFASGSDD--ATCRLYDLRADREVAIYSKESIIFGASSVDFSLS-GRLLFAGYNDY 306 (354)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEEETTS
T ss_pred CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC--CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC-CCEEEEEECCC
Confidence 44333333444567899999986666555432 3455555554332223321 1 233467777754 44444444556
Q ss_pred eEEEEeCC
Q psy6572 719 YIAVSDLN 726 (1416)
Q Consensus 719 ~I~~~~ld 726 (1416)
.|...++.
T Consensus 307 ~i~vwd~~ 314 (354)
T 2pbi_B 307 TINVWDVL 314 (354)
T ss_dssp CEEEEETT
T ss_pred cEEEEECC
Confidence 77777763
No 338
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.12 E-value=12 Score=44.23 Aligned_cols=113 Identities=12% Similarity=0.009 Sum_probs=63.9
Q ss_pred EEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC
Q psy6572 615 TVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN 694 (1416)
Q Consensus 615 AvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~ 694 (1416)
++.+.++ ++++-...+.|.+.++........+.........|+++|...+|+..... ..|...++........+...
T Consensus 275 ~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d--g~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 275 TVSGHGN-IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD--TTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp EEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT--SCEEEEETTTTEEEEEECCC
T ss_pred EEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC--CcEEEEECCCCcEEEEEeCC
Confidence 4444344 44455556788888886544333333445567889999987777766532 35666666533322223333
Q ss_pred CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEE
Q psy6572 695 LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 695 l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v 733 (1416)
-.....|+++ +.++++-...+.|...++....+...
T Consensus 352 ~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 352 TALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeee
Confidence 3445667764 34444444566788888765444433
No 339
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=94.12 E-value=2.1 Score=54.88 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=52.9
Q ss_pred cceeeecCCcceEE-Ee-eCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCC------CCeEEEEeC
Q psy6572 654 PRGIALNPAYGYMY-WT-DWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAH------EDYIAVSDL 725 (1416)
Q Consensus 654 P~gIavDp~~g~LY-Wt-D~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~------~~~I~~~~l 725 (1416)
+..++..|....|+ |+ +.....+|++.+++|...+.|.......-.-+.+| +++||++... ...|+++++
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEET
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEEC
Confidence 45778888876665 55 33334689999999987776655432211223455 7889988654 348999999
Q ss_pred CCCceEEEEe
Q psy6572 726 NGENIKIIVS 735 (1416)
Q Consensus 726 dG~~r~~v~~ 735 (1416)
+|...++.++
T Consensus 399 ~g~~~~~~lt 408 (740)
T 4a5s_A 399 IDYTKVTCLS 408 (740)
T ss_dssp TEEEEEEESS
T ss_pred CCCCcceeec
Confidence 9877654443
No 340
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.05 E-value=12 Score=50.84 Aligned_cols=232 Identities=6% Similarity=-0.054 Sum_probs=126.2
Q ss_pred eEecCCCCCeEEEEe-cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEe
Q psy6572 532 CKATSDVPPNLLFTN-KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLF 606 (1416)
Q Consensus 532 C~a~~~~~~~li~s~-~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~ 606 (1416)
+.+..+...+|+.+. ...|+..++.... ..+......+.+|+|.+.++.|...... +.|...++.+.. ..+.
T Consensus 620 ~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEECCCCceEEEEc
Confidence 444444444454433 3446666655443 2223344567889999887777665443 368887777322 2222
Q ss_pred e-cCCCceEEEEcc-CCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 607 P-ATSPDGLTVDWV-GRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 607 ~-l~~p~gLAvD~~-~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
. ...+..+++.+. .+.++.+-...+.|.+.++........+........++++.|...+|+..... ..|...++..
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d--g~v~vwd~~~ 774 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD--GTLRLWDVRS 774 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS--SEEEEEEGGG
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC--CeEEEEeCCC
Confidence 2 445667777664 33455566667789999887665444444555668899999987666655432 2455555543
Q ss_pred CCCE-EEeecC------------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEe-ccCCCCcccccceeE
Q psy6572 685 SNPK-VIISKN------------LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVS-RRMDPTINLHHVFAL 750 (1416)
Q Consensus 685 s~r~-vlv~~~------------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~-~~~~p~~~l~~P~~l 750 (1416)
.... .+.... ......+++.+....|+.+. .+.|...++........+. .. ......+
T Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~------~~~v~~~ 846 (1249)
T 3sfz_A 775 ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGH------HSTIQYC 846 (1249)
T ss_dssp TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEECSS------SSCCCEE
T ss_pred CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCCceeEEcCCC------CCceEEE
Confidence 3222 211111 11345667766555555554 4677777765443333332 22 2334455
Q ss_pred EEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 751 AVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 751 av~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
++. .+.++.+-...+.|...+..++.
T Consensus 847 ~~sp~~~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 847 DFSPYDHLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp EECSSTTEEEEECSSSCEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 553 34555555555566555544443
No 341
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=93.80 E-value=0.025 Score=59.16 Aligned_cols=47 Identities=38% Similarity=0.947 Sum_probs=40.5
Q ss_pred CceEEeeCCCceecCCCCCccc-cCCcCC-CCCccc--eeeec-CCeeeecCCCCcE
Q psy6572 473 IGYKCACRKGYQVHPEDKHLCV-DTNECL-DRPCSH--YCRNT-LGSYSCSCAPGYA 524 (1416)
Q Consensus 473 ~gy~C~C~~Gy~L~p~d~~tC~-didEC~-~~~Csq--~C~nt-~gsy~C~C~~Gy~ 524 (1416)
++|+|.|++||. +..|. ++++|. ..+|++ .|+++ .++|+|.|++||+
T Consensus 112 ~~~~C~C~~G~~-----G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 112 EPWQCLCETNWG-----GQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp STTCCEECTTEE-----TTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred CCCEEeCCCCCC-----CCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence 579999999996 45787 899997 578876 89997 8999999999996
No 342
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.76 E-value=1.4 Score=56.09 Aligned_cols=183 Identities=10% Similarity=0.069 Sum_probs=103.4
Q ss_pred EEEEEecCCcc---eEEeccc---ccceeeeeecCCCeEEEeeccC-CCccEEEEecC-CCCeEEee-cCCCceEEEEcc
Q psy6572 549 YIREVTQAGVM---TIRIHNQ---TNAVGLDFDWVDNCLYWSDVTM-HGSSIRRSCNN-SQPELLFP-ATSPDGLTVDWV 619 (1416)
Q Consensus 549 ~I~~i~l~g~~---~~~~~~l---~~~~~l~~D~~~~~LYwtD~~~-~~~~I~r~~l~-s~~~~l~~-l~~p~gLAvD~~ 619 (1416)
.|++..+.+.. .++.... ....++++.+.++.|+++.... ....|+.+... +..+.|.. .......+ .+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 281 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH-AWK 281 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE-EET
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE-ecC
Confidence 37777776544 3444332 2456788888888888765442 22366666554 44555554 33333333 245
Q ss_pred CCcEEEeeC---CCCeEEEeecCCCce---EEEEcCC-CCCcceeeecCCcceEEEeeC-CCCceEEEEecCCCCCEEEe
Q psy6572 620 GRNLYWCDK---GLDTIEVAKLDGRFR---KVLINKG-LQEPRGIALNPAYGYMYWTDW-GQNAHIGKAKMDGSNPKVII 691 (1416)
Q Consensus 620 ~~~LYwtD~---~~~~I~v~~ldG~~~---~vLi~~~-l~~P~gIavDp~~g~LYWtD~-g~~~~I~ra~mDGs~r~vlv 691 (1416)
++ ||++.. ...+|.+.++++... +.|+... .....++++. .++|+++-. ....+|++.+++|...+.|.
T Consensus 282 g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 358 (695)
T 2bkl_A 282 DR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQ 358 (695)
T ss_dssp TE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECC
T ss_pred Cc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEec
Confidence 55 777543 357899999876542 4555433 2334566665 567776642 33468888888876433332
Q ss_pred ecCCCCCeeEEeecCCCeEEEecC---CCCeEEEEeCCCCceEEEEe
Q psy6572 692 SKNLSWPNALTISYETNELFWGDA---HEDYIAVSDLNGENIKIIVS 735 (1416)
Q Consensus 692 ~~~l~~P~gLaiD~~~~rLYWtD~---~~~~I~~~~ldG~~r~~v~~ 735 (1416)
........++++.+...+|+++-. .-..|+..++.+...+++..
T Consensus 359 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 359 LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 211222345555554556665432 22478888887666655543
No 343
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.71 E-value=9.2 Score=45.07 Aligned_cols=212 Identities=7% Similarity=0.017 Sum_probs=104.0
Q ss_pred EEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCceEEEEccCCc
Q psy6572 548 YYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDGLTVDWVGRN 622 (1416)
Q Consensus 548 ~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~gLAvD~~~~~ 622 (1416)
..|+..++.... ..+......+.+++++ .+.|+..... +.|+..++.+.. ..+.. ...+..|+++ +.
T Consensus 139 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~ 210 (445)
T 2ovr_B 139 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTD---RTLKVWNAETGECIHTLYGHTSTVRCMHLH---EK 210 (445)
T ss_dssp SCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEEE---TT
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCC---CeEEEEECCcCcEEEEECCCCCcEEEEEec---CC
Confidence 345555554333 1222233445667775 4444444333 367777776321 11211 3344556654 44
Q ss_pred EEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEE
Q psy6572 623 LYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALT 702 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLa 702 (1416)
++++-...+.|.+.++........+.........|+++ ..+|+..... ..|...++........+.........|+
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~ 286 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD--FMVKVWDPETETCLHTLQGHTNRVYSLQ 286 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEETT--SCEEEEEGGGTEEEEEECCCSSCEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEcCC--CEEEEEECCCCcEeEEecCCCCceEEEE
Confidence 55666667889998887544333333444556677773 3344444422 3455555543322222222223334555
Q ss_pred eecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 703 ISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 703 iD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
+ ....| ++-...+.|...++........+... .....++++.++ ++++-...+.|...+..++.....+
T Consensus 287 ~--~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 287 F--DGIHV-VSGSLDTSIRVWDVETGNCIHTLTGH------QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp E--CSSEE-EEEETTSCEEEEETTTCCEEEEECCC------CSCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEE
T ss_pred E--CCCEE-EEEeCCCeEEEEECCCCCEEEEEcCC------cccEEEEEEeCC-EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 5 23444 44444667888887543333333322 223445555444 4455555566666665555544433
No 344
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.69 E-value=14 Score=43.48 Aligned_cols=214 Identities=10% Similarity=-0.024 Sum_probs=106.5
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEee-cCCCceEEEEc-cC
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLFP-ATSPDGLTVDW-VG 620 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~~-l~~p~gLAvD~-~~ 620 (1416)
...|+..++.... ..+......+.+|+|.+.+ .|+..... +.|+..++.+.. .++.. ...+..|++.+ ..
T Consensus 141 dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 216 (464)
T 3v7d_B 141 DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSS
T ss_pred CCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECCCCcEEEEECCCCCccEEEEEecCCC
Confidence 3456666655443 2222334456778886544 44333332 377777777322 12222 44566777775 34
Q ss_pred CcEEEeeCCCCeEEEeecCCCceEE-----------------------EEcCCCCCcceeeecCCcceEEEeeCCCCceE
Q psy6572 621 RNLYWCDKGLDTIEVAKLDGRFRKV-----------------------LINKGLQEPRGIALNPAYGYMYWTDWGQNAHI 677 (1416)
Q Consensus 621 ~~LYwtD~~~~~I~v~~ldG~~~~v-----------------------Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I 677 (1416)
++++++-...+.|.+.++....... ......... .++.+...+|+..... ..|
T Consensus 217 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d--~~i 292 (464)
T 3v7d_B 217 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYD--NTL 292 (464)
T ss_dssp CEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETT--SCE
T ss_pred CCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCC--CeE
Confidence 5666676677788888776543111 111111112 2233444455544422 245
Q ss_pred EEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcE
Q psy6572 678 GKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHL 757 (1416)
Q Consensus 678 ~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~L 757 (1416)
...++........+.........|++++....|+. -...+.|...++........+... .....+|++. +.+
T Consensus 293 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-g~~dg~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~-~~~ 364 (464)
T 3v7d_B 293 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS-ASMDTTIRIWDLENGELMYTLQGH------TALVGLLRLS-DKF 364 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE-EETTSCEEEEETTTTEEEEEECCC------SSCEEEEEEC-SSE
T ss_pred EEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCcEEEEEeCC------CCcEEEEEEc-CCE
Confidence 55555433222223333445678888875555554 445567888887543333333322 2233455554 445
Q ss_pred EEeecCCCeeEEecccCCC
Q psy6572 758 FWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 758 YwtD~~~~~I~~~nk~tG~ 776 (1416)
+++-...+.|..-+..++.
T Consensus 365 l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEETTSEEEEEETTTCC
T ss_pred EEEEeCCCcEEEEECCCCc
Confidence 5555555666655544443
No 345
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.67 E-value=3.4 Score=46.36 Aligned_cols=185 Identities=9% Similarity=-0.086 Sum_probs=102.2
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC----CeEEee-cCCCceEEEEccCC-cEEEeeCCCCeEEEeec-
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ----PELLFP-ATSPDGLTVDWVGR-NLYWCDKGLDTIEVAKL- 638 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~----~~~l~~-l~~p~gLAvD~~~~-~LYwtD~~~~~I~v~~l- 638 (1416)
..+.+|+|.+.++.|+..... +.|+...+. .. ...+.. ...+..|++.+.+. .|+ +-...+.|.+.++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d---~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD---GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY-VGTVQGEILKVDLI 87 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT---SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEE-EEETTSCEEEECSS
T ss_pred CcEEEEEEcCCCCEEEEEcCC---CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEE-EEcCCCeEEEEEec
Confidence 346677888776666665443 366666665 22 222222 55677888887655 454 4445678999998
Q ss_pred CCCceEEEEcC--CCCCcceeeecCCcceEEEeeCCCCceEEEEecCC---------CCCEEEeecCCCCCeeEEeecCC
Q psy6572 639 DGRFRKVLINK--GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG---------SNPKVIISKNLSWPNALTISYET 707 (1416)
Q Consensus 639 dG~~~~vLi~~--~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG---------s~r~vlv~~~l~~P~gLaiD~~~ 707 (1416)
.+.....+. . ......+|++.| .++|+..... ..|...++.. ......+. .-..+.+|++.+
T Consensus 88 ~~~~~~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-- 160 (342)
T 1yfq_A 88 GSPSFQALT-NNEANLGICRICKYG-DDKLIAASWD--GLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS-- 160 (342)
T ss_dssp SSSSEEECB-SCCCCSCEEEEEEET-TTEEEEEETT--SEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS--
T ss_pred cCCceEecc-ccCCCCceEEEEeCC-CCEEEEEcCC--CeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC--
Confidence 766554443 3 445578999999 6666655533 3566555542 11100111 223456677753
Q ss_pred CeEEEecCCCCeEEEEeCCC-Cc--eEEEEeccCCCCcccccceeEEEe--cCcEEEeecCCCeeEE
Q psy6572 708 NELFWGDAHEDYIAVSDLNG-EN--IKIIVSRRMDPTINLHHVFALAVF--EDHLFWTDWEMKSIER 769 (1416)
Q Consensus 708 ~rLYWtD~~~~~I~~~~ldG-~~--r~~v~~~~~~p~~~l~~P~~lav~--~d~LYwtD~~~~~I~~ 769 (1416)
+.|+.+ ...+.|...++.. .. ...+.... -..+.+|++. .+.++++-...+.|..
T Consensus 161 ~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~i~~~~~~~~~l~~~~~dg~i~i 220 (342)
T 1yfq_A 161 SRLIVG-MNNSQVQWFRLPLCEDDNGTIEESGL------KYQIRDVALLPKEQEGYACSSIDGRVAV 220 (342)
T ss_dssp SEEEEE-ESTTEEEEEESSCCTTCCCEEEECSC------SSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred CcEEEE-eCCCeEEEEECCccccccceeeecCC------CCceeEEEECCCCCCEEEEEecCCcEEE
Confidence 334444 3456777777765 22 22222211 2234566665 3556666555565554
No 346
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=93.55 E-value=0.024 Score=63.52 Aligned_cols=42 Identities=24% Similarity=0.694 Sum_probs=33.5
Q ss_pred ccCCcCC--CCCccc--eeeecCCeeeecCCCCcEEecCCCceEecCC
Q psy6572 494 VDTNECL--DRPCSH--YCRNTLGSYSCSCAPGYALLSDKHGCKATSD 537 (1416)
Q Consensus 494 ~didEC~--~~~Csq--~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~~ 537 (1416)
.|+|||+ .++|+. .|+|+.|+|+|.|.+||. .+|++|.+++.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCC
Confidence 5789997 678974 799999999999999997 67889999864
No 347
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.54 E-value=2.3 Score=54.71 Aligned_cols=199 Identities=7% Similarity=-0.043 Sum_probs=105.5
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccC-CcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVG-RNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~-~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+.+|+|.+.++.|+..... +.|....+. .....+.. ...+.+|++.+.. ++++.+-...+.|.+.++.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~d---g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETT---TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred ceeEEEEECCCCCeEEEEECC---CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 456677887777666655433 356666654 22222222 3345566665542 56666666778899888876
Q ss_pred Cce--EEEEcCCCCCcceeeecCC--cceEEEeeCCCCceEEEEecCCC--CCEEEeecCCCCCeeEEeecC--------
Q psy6572 641 RFR--KVLINKGLQEPRGIALNPA--YGYMYWTDWGQNAHIGKAKMDGS--NPKVIISKNLSWPNALTISYE-------- 706 (1416)
Q Consensus 641 ~~~--~vLi~~~l~~P~gIavDp~--~g~LYWtD~g~~~~I~ra~mDGs--~r~vlv~~~l~~P~gLaiD~~-------- 706 (1416)
... ...+.........|++.|. ..+|+.+.. ...|...++... .....+.........|++.+.
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~--dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeC--CCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 542 2222234556789999998 455555543 235666666554 233333334445567777763
Q ss_pred ----CCeEEEecCCCCeEEEEeCCCC-ceEEEEeccCCCCcccccceeEEEec----CcEEEeecCCCeeEEeccc
Q psy6572 707 ----TNELFWGDAHEDYIAVSDLNGE-NIKIIVSRRMDPTINLHHVFALAVFE----DHLFWTDWEMKSIERCDKY 773 (1416)
Q Consensus 707 ----~~rLYWtD~~~~~I~~~~ldG~-~r~~v~~~~~~p~~~l~~P~~lav~~----d~LYwtD~~~~~I~~~nk~ 773 (1416)
++.++.+-...+.|...++... ....++..-. ..-....+|++.. +.++.+-...+.|...+..
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 2444444445566777665433 2212221100 0022345666642 3555555555555544433
No 348
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.48 E-value=6.8 Score=48.82 Aligned_cols=199 Identities=10% Similarity=0.007 Sum_probs=109.6
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-C-CCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecC-CCc
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S-QPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRF 642 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s-~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~ 642 (1416)
..+..|+|++.++.|..... ..|+...+. . ...++.. ...+..||+.+.+..| .+-...++|.+-++. +..
T Consensus 19 g~~~~~~~spdg~~l~~~~~----~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNG----TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp TCCCCCEECTTSSEEEEEET----TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTC
T ss_pred CceeEEeeCCCCCEEEeCCC----CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcc
Confidence 45678889988887776542 266666665 2 3334433 5567889998865544 455556788888874 332
Q ss_pred e-EEEEcCCCCCcceeeecCCcceEEEeeCCCC--ceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCe
Q psy6572 643 R-KVLINKGLQEPRGIALNPAYGYMYWTDWGQN--AHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDY 719 (1416)
Q Consensus 643 ~-~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~--~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~ 719 (1416)
. ...+.......++|++.|...+|..+..+.. .+|...+. |..... +.......+.+++.+....++.+-...+.
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~-l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGN-LTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBC-CCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCcce-ecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence 1 2222233345789999998777766543321 23443332 222211 12223345677777654444444444556
Q ss_pred EEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCce
Q psy6572 720 IAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNC 778 (1416)
Q Consensus 720 I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~ 778 (1416)
|...++........+.++ -....+|++. .+.++.+-...+.|..-+..+|...
T Consensus 172 v~lwd~~~~~~~~~l~~H------~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEH------TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp EEEEETTTBEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEECCCCeEeeeeccc------cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEe
Confidence 666654332222222222 2345667764 4566666666677666665555443
No 349
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.47 E-value=14 Score=43.46 Aligned_cols=204 Identities=9% Similarity=0.011 Sum_probs=101.6
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe--EEee-cCCCceEEEEccCC
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE--LLFP-ATSPDGLTVDWVGR 621 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~--~l~~-l~~p~gLAvD~~~~ 621 (1416)
...|+..++.... ..+......+.+|++ ..+.|+..... +.|+..++.+... .+.. ...+..|+ +. +
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~l~--~~-~ 223 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD---STVRVWDVNTGEMLNTLIHHCEAVLHLR--FN-N 223 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT---SCEEEEESSSCCEEEEECCCCSCEEEEE--CC-T
T ss_pred CCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC---CeEEEEECCCCcEEEEEcCCCCcEEEEE--Ec-C
Confidence 3346555554433 222223345666776 34444443332 3777777773221 1111 23334444 43 4
Q ss_pred cEEEeeCCCCeEEEeecCCCceE---EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCC
Q psy6572 622 NLYWCDKGLDTIEVAKLDGRFRK---VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWP 698 (1416)
Q Consensus 622 ~LYwtD~~~~~I~v~~ldG~~~~---vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P 698 (1416)
.++++-...+.|.+.++...... ..+........+|+++ ..+|+.+.. ...|...++........+.......
T Consensus 224 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v 299 (435)
T 1p22_A 224 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGI 299 (435)
T ss_dssp TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEET--TSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEeC--CCeEEEEECCcCcEEEEEcCCCCcE
Confidence 45666667788888888654322 2222333445666663 345555542 2356666665444333333333444
Q ss_pred eeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecc
Q psy6572 699 NALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 699 ~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk 772 (1416)
..|+++ +.++++-...+.|...++........+... .....+|++ .+.++++-...+.|...+.
T Consensus 300 ~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~~~~-~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 300 ACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGH------EELVRCIRF-DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEC-CSSEEEEEETTSCEEEEEH
T ss_pred EEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCC------cCcEEEEEe-cCCEEEEEeCCCcEEEEEC
Confidence 566664 344445445677888887643333333322 223445555 4455555555566655543
No 350
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.41 E-value=3.1 Score=53.63 Aligned_cols=196 Identities=8% Similarity=-0.046 Sum_probs=110.7
Q ss_pred ceeeeee-cCCCeEEEeeccCCC--ccEEEEecCCC-CeEEee-cC-CCceEEEEccCCcEEEeeCCC----CeEEEeec
Q psy6572 569 AVGLDFD-WVDNCLYWSDVTMHG--SSIRRSCNNSQ-PELLFP-AT-SPDGLTVDWVGRNLYWCDKGL----DTIEVAKL 638 (1416)
Q Consensus 569 ~~~l~~D-~~~~~LYwtD~~~~~--~~I~r~~l~s~-~~~l~~-l~-~p~gLAvD~~~~~LYwtD~~~----~~I~v~~l 638 (1416)
..++.+. +.+++|.|+...... ..|+++.+.+. . .+.. +. ...+++..+-++.||++.... .+|++.++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~-~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ-TIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC-CCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE-eCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 4567777 778877766543211 24888888843 2 1111 11 134566666667788775431 37999999
Q ss_pred CCCc-e-EEEEc-CCCCCcceeeecCCcceEEEeeCC-CCceEEEEecCCCC-CE--EEeecCCCCCeeEEee-cCCCeE
Q psy6572 639 DGRF-R-KVLIN-KGLQEPRGIALNPAYGYMYWTDWG-QNAHIGKAKMDGSN-PK--VIISKNLSWPNALTIS-YETNEL 710 (1416)
Q Consensus 639 dG~~-~-~vLi~-~~l~~P~gIavDp~~g~LYWtD~g-~~~~I~ra~mDGs~-r~--vlv~~~l~~P~gLaiD-~~~~rL 710 (1416)
.+.. . +.+.. ..-..-.++++.|...+|+|+.+. ....|+.+++++.. .. +.+......+ -..++ ...++|
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~~s~~~~~g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV-RYDVQMHGTSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC-CEEEEEETTTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc-eEEEeeeeCCEE
Confidence 8754 2 23332 222233567888988899988643 34679999998752 22 2232222222 12344 347788
Q ss_pred EEecC----CCCeEEEEeCCC-CceEE-EEeccCCCCcccccceeEEEecCcEEEeecCCC--eeEEec
Q psy6572 711 FWGDA----HEDYIAVSDLNG-ENIKI-IVSRRMDPTINLHHVFALAVFEDHLFWTDWEMK--SIERCD 771 (1416)
Q Consensus 711 YWtD~----~~~~I~~~~ldG-~~r~~-v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~--~I~~~n 771 (1416)
||.-. ...+|+++++++ ...+. |+.... -....++++++++||++-...+ .|+.++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~-----~~~l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSE-----DVFMESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCS-----SEEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCC-----CcEEEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 87632 345899999874 33333 443220 1123456677888887755433 355555
No 351
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=93.32 E-value=0.029 Score=48.19 Aligned_cols=34 Identities=32% Similarity=0.872 Sum_probs=29.0
Q ss_pred ccccCCcCCCCCccc----eeeecCCeeeecCCCCcEE
Q psy6572 492 LCVDTNECLDRPCSH----YCRNTLGSYSCSCAPGYAL 525 (1416)
Q Consensus 492 tC~didEC~~~~Csq----~C~nt~gsy~C~C~~Gy~L 525 (1416)
.+.++++|+..||.+ .|+++.++|+|.|++||.+
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~ 44 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRI 44 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEE
T ss_pred hcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCcc
Confidence 467788898778864 7999999999999999983
No 352
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=93.31 E-value=0.022 Score=63.83 Aligned_cols=44 Identities=25% Similarity=0.609 Sum_probs=33.2
Q ss_pred ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccccCCcC
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNEC 499 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC 499 (1416)
+++||...... |+. .|+|++++|.|.|++||. .++..|.++++.
T Consensus 4 DiDEC~~~~~~--C~~~a~C~Nt~Gsy~C~C~~Gy~---GnG~~C~d~d~P 49 (285)
T 1gl4_A 4 AQQTCANNRHQ--CSVHAECRDYATGFCCRCVANYT---GNGRQCVAEGSP 49 (285)
T ss_dssp ---CHHHHGGG--SCTTEEEEECSSCEEEEECTTEE---ECSSSEEETTCE
T ss_pred cchhccCCCCC--CCCCCEeEcCCCCeEEEcCCCCC---CCCCcCCCCCCC
Confidence 46788543333 874 699999999999999997 478899999884
No 353
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=93.28 E-value=0.69 Score=58.91 Aligned_cols=217 Identities=12% Similarity=-0.036 Sum_probs=111.0
Q ss_pred EEEEEEecCCcceEE-ecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee-c----------------
Q psy6572 548 YYIREVTQAGVMTIR-IHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-A---------------- 608 (1416)
Q Consensus 548 ~~I~~i~l~g~~~~~-~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l---------------- 608 (1416)
..|+.+++.+...+. ..-...+..++|.+.++.|.++.. ..|+...+. +....+.. .
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~----~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ----NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp EEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET----TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHH
T ss_pred eEEEEEECCCCccccceecCcccccceECCCCCEEEEEEC----CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeee
Confidence 567777776653200 111134566888888888877642 267777776 33322221 0
Q ss_pred ---CCCceEEEEccCCcEEEeeCCC---------------------------------CeEEEeecCCCceE---EEEc-
Q psy6572 609 ---TSPDGLTVDWVGRNLYWCDKGL---------------------------------DTIEVAKLDGRFRK---VLIN- 648 (1416)
Q Consensus 609 ---~~p~gLAvD~~~~~LYwtD~~~---------------------------------~~I~v~~ldG~~~~---vLi~- 648 (1416)
....++++-+-++.|+++.... .+|.+.++++.... .|..
T Consensus 166 e~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 245 (719)
T 1z68_A 166 EMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP 245 (719)
T ss_dssp HTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC
T ss_pred ecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCC
Confidence 1224788888788887754211 15556666654321 1110
Q ss_pred ----CCCCCcceeeecCCcceEEEe--eCC-CCceEEEEe----cCCCCCEEEe----ecCCCCCe-----eEEeecCCC
Q psy6572 649 ----KGLQEPRGIALNPAYGYMYWT--DWG-QNAHIGKAK----MDGSNPKVII----SKNLSWPN-----ALTISYETN 708 (1416)
Q Consensus 649 ----~~l~~P~gIavDp~~g~LYWt--D~g-~~~~I~ra~----mDGs~r~vlv----~~~l~~P~-----gLaiD~~~~ 708 (1416)
........++..|. ++|+++ +.. ....|...+ +.+...+.++ ...-.+.. .+++.+..+
T Consensus 246 ~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 246 AMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp HHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred ccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC
Confidence 11223467888888 555444 322 124677777 5443333333 12222222 567766666
Q ss_pred eEEEe-c--CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecC------CCeeEEecccCC
Q psy6572 709 ELFWG-D--AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWE------MKSIERCDKYTG 775 (1416)
Q Consensus 709 rLYWt-D--~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~------~~~I~~~nk~tG 775 (1416)
+||++ . .+...|+.+++++...+.|.... ..+..+... .+++||++... ...|++++..+|
T Consensus 325 ~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~----~~v~~~~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 325 SYYKIFSDKDGYKHIHYIKDTVENAIQITSGK----WEAINIFRV--TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp CEEEEEECTTSCEEEEEESSCSTTCEECSCSS----SCEEEEEEE--CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred eEEEEEEccCCceEEEEEECCCCceEecccCc----eEEEEEEEE--eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 66663 2 23447888888876655443221 001112111 55677777643 345666654334
No 354
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.20 E-value=7.9 Score=48.94 Aligned_cols=191 Identities=7% Similarity=-0.034 Sum_probs=105.9
Q ss_pred ceEecCCCCCeEEEE--ecEEEEEEecCCcc-------eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCC
Q psy6572 531 GCKATSDVPPNLLFT--NKYYIREVTQAGVM-------TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ 601 (1416)
Q Consensus 531 sC~a~~~~~~~li~s--~~~~I~~i~l~g~~-------~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~ 601 (1416)
++.+.......+|++ ....|+..++.... ..+......+..|+|.+.++.|.-.... +.|+..++.+.
T Consensus 386 ~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~~~ 462 (694)
T 3dm0_A 386 TAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLAAG 462 (694)
T ss_dssp EEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTT
T ss_pred EEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECCCC
Confidence 344443333334443 23456655554321 1223334456788898877766654433 37777777632
Q ss_pred C--eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcC---CCCCcceeeecCCcc-eEEEeeCCCC
Q psy6572 602 P--ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINK---GLQEPRGIALNPAYG-YMYWTDWGQN 674 (1416)
Q Consensus 602 ~--~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~---~l~~P~gIavDp~~g-~LYWtD~g~~ 674 (1416)
. ..+.. ...+..|++.+.++.| ++-...++|.+-++.+.....+... .......|++.|... .++.+- +..
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-s~d 540 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWD 540 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE-ETT
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE-eCC
Confidence 2 22222 4557788888765555 4555667888888776655444322 223467788888653 233332 122
Q ss_pred ceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC
Q psy6572 675 AHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 675 ~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG 727 (1416)
..|..-++........+.........|++.+ .++++.+-...+.|...++..
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCC
Confidence 3566666665444444444445567888876 455555555567777777643
No 355
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.11 E-value=1.2 Score=51.09 Aligned_cols=151 Identities=8% Similarity=-0.101 Sum_probs=79.8
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecCCCC-eEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP-ELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~-~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
.+.+|+|.+.++.|+..... +.|+...+.+.. +.+.. ...+..|++.+.+..|+ +-...+.|.+.++....
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT---NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIV-TCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS---SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEE-EEETTSSEEEC------
T ss_pred cEEEEEECCCCCEEEEecCC---CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEE-EEeCCCeEEEEEcCCCC
Confidence 46778888866655544332 245555554221 22222 34567788877655554 44456778888876543
Q ss_pred ---eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC----CEEEeecCCCCCeeEEeecCCCeEEEecC
Q psy6572 643 ---RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN----PKVIISKNLSWPNALTISYETNELFWGDA 715 (1416)
Q Consensus 643 ---~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~----r~vlv~~~l~~P~gLaiD~~~~rLYWtD~ 715 (1416)
....+.........|++.|...+|+..... ..|...+++... .+.+....-.....|++.+....|+.+ .
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~ 165 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG-C 165 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS--SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE-E
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecC--CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE-e
Confidence 222222344567889999987777776543 356666666543 233322134556788888654444444 3
Q ss_pred CCCeEEEEeC
Q psy6572 716 HEDYIAVSDL 725 (1416)
Q Consensus 716 ~~~~I~~~~l 725 (1416)
..+.|...++
T Consensus 166 ~d~~i~iwd~ 175 (377)
T 3dwl_C 166 ADRKAYVLSA 175 (377)
T ss_dssp SSSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 3455666554
No 356
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.98 E-value=17 Score=42.39 Aligned_cols=164 Identities=11% Similarity=0.050 Sum_probs=87.3
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC-Cc-eEEE------EcCCCCCcceeeecCCc-ceEEEeeCCCCceEE
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG-RF-RKVL------INKGLQEPRGIALNPAY-GYMYWTDWGQNAHIG 678 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG-~~-~~vL------i~~~l~~P~gIavDp~~-g~LYWtD~g~~~~I~ 678 (1416)
...+..|++.+.+.. +.+- ..+.|.+.++.. .. ..++ +.........|++.|.. .+|+..... ..|.
T Consensus 177 ~~~v~~~~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--g~i~ 252 (447)
T 3dw8_B 177 TYHINSISINSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK--GTIR 252 (447)
T ss_dssp SSCCCEEEECTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT--SCEE
T ss_pred CcceEEEEEcCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC--CeEE
Confidence 445778888875444 4454 578999999872 22 2222 11233457889999986 455544432 3566
Q ss_pred EEecCCCCC----EEEeecCCC------------CCeeEEeecCCCeEEEecCCCCeEEEEeCC--CCceEEEEeccCCC
Q psy6572 679 KAKMDGSNP----KVIISKNLS------------WPNALTISYETNELFWGDAHEDYIAVSDLN--GENIKIIVSRRMDP 740 (1416)
Q Consensus 679 ra~mDGs~r----~vlv~~~l~------------~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld--G~~r~~v~~~~~~p 740 (1416)
..++..... ...+..... ....|++.+....|+.+. . +.|...++. +.....+.......
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeEEEEeCCCCccccceeecccccc
Confidence 666654432 233332221 567899987555555444 3 888888874 44333332211000
Q ss_pred C--------cccccceeEEEe-cCcEEEeecCCCeeEEecccCCCc
Q psy6572 741 T--------INLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKN 777 (1416)
Q Consensus 741 ~--------~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~ 777 (1416)
. ..+...+.+++. .+.++.+-...+.|...+..++..
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 0 000112346664 334445656666776666555544
No 357
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.98 E-value=18 Score=42.51 Aligned_cols=215 Identities=7% Similarity=-0.019 Sum_probs=107.0
Q ss_pred EEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCe-EEee-cCCCceEEEEccCCc
Q psy6572 548 YYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPE-LLFP-ATSPDGLTVDWVGRN 622 (1416)
Q Consensus 548 ~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~-~l~~-l~~p~gLAvD~~~~~ 622 (1416)
..|+..++.... ..+......+.+++++ .+.|+..... +.|+..++.+ ... .+.. ...+..|++ .+.
T Consensus 179 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d---g~i~~wd~~~~~~~~~~~~~~~~v~~~~~---~~~ 250 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRD---ATLRVWDIETGQCLHVLMGHVAAVRCVQY---DGR 250 (445)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETT---SEEEEEESSSCCEEEEEECCSSCEEEEEE---CSS
T ss_pred CeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCC---CEEEEEECCCCcEEEEEcCCcccEEEEEE---CCC
Confidence 346656655443 2222233345566664 4444444333 3677777762 222 2222 334455555 355
Q ss_pred EEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEE
Q psy6572 623 LYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALT 702 (1416)
Q Consensus 623 LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLa 702 (1416)
++++-...+.|.+.++........+........+|+++ ..+|+.... ...|...++........+........+++
T Consensus 251 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSL--DTSIRVWDVETGNCIHTLTGHQSLTSGME 326 (445)
T ss_dssp CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC--SSEEEEEET--TSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC--CCEEEEEeC--CCeEEEEECCCCCEEEEEcCCcccEEEEE
Confidence 55666667788888876543322232333445566663 334544442 23566666654333333333333445666
Q ss_pred eecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 703 ISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 703 iD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
++ .+ ++++-...+.|...++........+.... .......+|++. +.++++-...+.|...+..+|.....+
T Consensus 327 ~~--~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 327 LK--DN-ILVSGNADSTVKIWDIKTGQCLQTLQGPN---KHQSAVTCLQFN-KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EE--TT-EEEEEETTSCEEEEETTTCCEEEEECSTT---SCSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred Ee--CC-EEEEEeCCCeEEEEECCCCcEEEEEccCC---CCCCCEEEEEEC-CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 64 34 44444456778888874333322222210 012223455554 455555556677777776666655444
No 358
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=92.89 E-value=0.02 Score=53.43 Aligned_cols=41 Identities=22% Similarity=0.413 Sum_probs=32.7
Q ss_pred ceEEeeCCCceecCCCCCccccCCcCCCCCccceeeecCCeeeecCCCCcE
Q psy6572 474 GYKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRNTLGSYSCSCAPGYA 524 (1416)
Q Consensus 474 gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~nt~gsy~C~C~~Gy~ 524 (1416)
+|+|.|.+||.+. .| ++++|...+ |+|..++|+|.|++||+
T Consensus 1 sy~C~C~~g~~g~-----~c-~~~~c~~~p----C~n~~~~y~C~C~~G~~ 41 (91)
T 1tpg_A 1 SYQVICRDEKTQM-----IY-QQHQSWLRP----VLRSNRVEYCWCNSGRA 41 (91)
T ss_dssp CCCCCCBCSSSCC-----BC-CSSCEEEEE----CSSSSCEEEEECSSSCC
T ss_pred CeeeECCCCCcCC-----eE-CCCcccCCc----cccCCCCcEeECCCCCc
Confidence 5889999999643 46 588876444 57889999999999995
No 359
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.85 E-value=24 Score=43.69 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=21.1
Q ss_pred EEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 750 LAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 750 lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
++..++.||... ..+.|+.++..+|+.+-.+
T Consensus 471 ~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 471 LYTKGGLVWYAT-LDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred EEECCCEEEEEc-CCCeEEEEECCCCCEEEEE
Confidence 444577888854 4577888888888765544
No 360
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.84 E-value=11 Score=42.30 Aligned_cols=130 Identities=6% Similarity=-0.107 Sum_probs=70.9
Q ss_pred cEEEEEEecCC--cc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEee-cCCCceEEEE-cc
Q psy6572 547 KYYIREVTQAG--VM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP-ATSPDGLTVD-WV 619 (1416)
Q Consensus 547 ~~~I~~i~l~g--~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~-l~~p~gLAvD-~~ 619 (1416)
...|+..++.. .. ..+......+..|+|.+.++.|+..... +.|+...+.+ ....+.. ...+..|++. ..
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAP 139 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECSSCEEEEEEEECS
T ss_pred CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcCCCCceeeccccCceEEEEEEeCC
Confidence 34566666653 22 2333345567889998877777765443 3677777773 2222222 5556777772 13
Q ss_pred CCcEEEeeCCCCeEEEeecCCC-ceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 620 GRNLYWCDKGLDTIEVAKLDGR-FRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 620 ~~~LYwtD~~~~~I~v~~ldG~-~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
.++++++-...+.|.+.++... ....+... ...+++++....++.+... ..|...++...
T Consensus 140 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~ 200 (368)
T 3mmy_A 140 NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP----ERCYCADVIYPMAVVATAE--RGLIVYQLENQ 200 (368)
T ss_dssp SCEEEEEEETTSEEEEECSSCSSCSEEEECS----SCEEEEEEETTEEEEEEGG--GCEEEEECSSS
T ss_pred CCCEEEEccCCCcEEEEECCCCcEEEEEecC----CCceEEEecCCeeEEEeCC--CcEEEEEeccc
Confidence 4555666666788988887643 33333321 1334444444555555432 24455555443
No 361
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.75 E-value=3.1 Score=48.75 Aligned_cols=157 Identities=11% Similarity=0.072 Sum_probs=85.0
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CC---------CeEEee----c------------CCCceEEEEccC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQ---------PELLFP----A------------TSPDGLTVDWVG 620 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~---------~~~l~~----l------------~~p~gLAvD~~~ 620 (1416)
..+.+|+|.+.++.|...... +.|+...+. .. .+++.. . ..+..|++.+.+
T Consensus 29 ~~V~~v~~s~~g~~la~g~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKG---GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETT---SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred CcEEEEEECCCCCEEEEEcCC---CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 456677777766666554433 256655555 11 011111 2 447778887765
Q ss_pred C-cEEEeeCCCCeEEEeecCCCce----------------------------------------EEEEcCCCCCcceeee
Q psy6572 621 R-NLYWCDKGLDTIEVAKLDGRFR----------------------------------------KVLINKGLQEPRGIAL 659 (1416)
Q Consensus 621 ~-~LYwtD~~~~~I~v~~ldG~~~----------------------------------------~vLi~~~l~~P~gIav 659 (1416)
+ .++.+-...+.|.+.++..... +++..........|++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3 4555556667777766543211 1222234455788999
Q ss_pred cCCcceEEEeeCCCCceEEEEecC-CCCCEEEe-------ecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCc
Q psy6572 660 NPAYGYMYWTDWGQNAHIGKAKMD-GSNPKVII-------SKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGEN 729 (1416)
Q Consensus 660 Dp~~g~LYWtD~g~~~~I~ra~mD-Gs~r~vlv-------~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~ 729 (1416)
.|...+|.-. . ...|...++. +.....++ ...-.....|++.+....++.+-...+.|...++....
T Consensus 186 ~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 186 NSDYETYLSA--D-DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp CTTSSEEEEE--C-SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred cCCCCEEEEe--C-CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 9975555443 2 3467666666 22222221 12233457888887553555555556778888865443
No 362
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.72 E-value=6.8 Score=42.49 Aligned_cols=106 Identities=18% Similarity=0.076 Sum_probs=68.8
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC-------CceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEE
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG-------RFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKA 680 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG-------~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra 680 (1416)
..+...||+++ ++.||-+ ..+.+++.+... ...+.|-..+...=.+|.+||. |.||.+. ..+|+|.
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~-G~LYav~---dG~iyr~ 112 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPN-GYLYAVS---KDKLYKA 112 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTT-SCEEEEE---TTEEEEE
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCC-CCEEEeC---CCEEEEe
Confidence 56788999999 9999999 556788887632 1123333334444678999965 9999983 2588888
Q ss_pred ec--CCCCC-----EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEE
Q psy6572 681 KM--DGSNP-----KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVS 723 (1416)
Q Consensus 681 ~m--DGs~r-----~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~ 723 (1416)
+- +|... .+|....-..-..|++++ ++.||-+. .+.|++.
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKA 159 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEec
Confidence 65 44432 333332323336788875 78888777 4445543
No 363
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.71 E-value=13 Score=41.19 Aligned_cols=155 Identities=8% Similarity=-0.005 Sum_probs=81.2
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC---eEEee-cCCCceEEEEcc-CCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP---ELLFP-ATSPDGLTVDWV-GRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~---~~l~~-l~~p~gLAvD~~-~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+..++|++.+++|.-.... +.|+...+. ... .++.. -..+.+|++.+. .++++.+-...++|.+-++..
T Consensus 10 ~~V~~~~~s~~g~~las~s~D---~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETT---SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CceEEEEECCCCCEEEEEeCC---CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 345678888877666554433 367766665 221 22222 334556666432 367777777788888888864
Q ss_pred Cc--eEEEEcCCCCCcceeeecCCc-c-eEEEeeCCCCceEEEEecCCCC--CEEEeecCCCCCeeEEeecCC-------
Q psy6572 641 RF--RKVLINKGLQEPRGIALNPAY-G-YMYWTDWGQNAHIGKAKMDGSN--PKVIISKNLSWPNALTISYET------- 707 (1416)
Q Consensus 641 ~~--~~vLi~~~l~~P~gIavDp~~-g-~LYWtD~g~~~~I~ra~mDGs~--r~vlv~~~l~~P~gLaiD~~~------- 707 (1416)
.. ....+.......+.|++.|.. | +|..+... ..|...++.... ...++.......+.+++.+..
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--CcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 32 112222233457789998863 4 44443322 355555554332 122333333334556665431
Q ss_pred -----CeEEEecCCCCeEEEEeCC
Q psy6572 708 -----NELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 708 -----~rLYWtD~~~~~I~~~~ld 726 (1416)
++++.+-...+.|...++.
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~ 188 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYN 188 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEE
T ss_pred CCCCCcceEEEEcCCCcEEEEEEc
Confidence 3444444444555555554
No 364
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.68 E-value=24 Score=44.70 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=21.9
Q ss_pred EEEecCcEEEeecCCCeeEEecccCCCceEEEE
Q psy6572 750 LAVFEDHLFWTDWEMKSIERCDKYTGKNCTSVV 782 (1416)
Q Consensus 750 lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l~ 782 (1416)
++..++.||.. ...+.|+.++..+|+.+..+.
T Consensus 484 ~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 484 LTTAGNVVFQG-TADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEETTTEEEEE-CTTSEEEEEETTTCCEEEEEE
T ss_pred eEeCCCEEEEE-CCCCcEEEEECCCCceeeeee
Confidence 44456777776 456788888888887655543
No 365
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.59 E-value=12 Score=43.57 Aligned_cols=215 Identities=13% Similarity=0.076 Sum_probs=108.8
Q ss_pred cceeeeeecC--CCeEEEeeccCCCccEEEEecC-CCCeEEee-c-------------------CCCceEEEEcc-CCcE
Q psy6572 568 NAVGLDFDWV--DNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-A-------------------TSPDGLTVDWV-GRNL 623 (1416)
Q Consensus 568 ~~~~l~~D~~--~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l-------------------~~p~gLAvD~~-~~~L 623 (1416)
.+.+|++++. .+.||..-.. ..|+|..-. ...+.+.. . .....|++|+. .+.|
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~---ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l 192 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSP---QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHL 192 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEET---TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCE
T ss_pred ceeEEEeCCCCCCCEEEEEecC---CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEE
Confidence 3557888874 5777775432 257776544 33333321 1 11247889975 4678
Q ss_pred EEeeCCCCeEEEeecCCCceEEEEcC--C--C--------CCcceeeecCCc-ceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 624 YWCDKGLDTIEVAKLDGRFRKVLINK--G--L--------QEPRGIALNPAY-GYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 624 YwtD~~~~~I~v~~ldG~~~~vLi~~--~--l--------~~P~gIavDp~~-g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
|+.... +.|++..-.|..-+.+... . + ..+..|+++|.. +.||.... ..|++..-.|..-+.
T Consensus 193 ~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~---~gl~~s~D~G~tW~~- 267 (394)
T 3b7f_A 193 YIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH---CGIYRMDRREGVWKR- 267 (394)
T ss_dssp EEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---TEEEEEETTTTEEEC-
T ss_pred EEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---CeEEEeCCCCCcceE-
Confidence 876432 3577766556544433211 0 1 235789999974 67777642 357777644443222
Q ss_pred eecCCCC-----CeeEEeecC-CCeEEEecC------------CCCeEEEEeCCCCceEEEEeccCCCCc-ccc--ccee
Q psy6572 691 ISKNLSW-----PNALTISYE-TNELFWGDA------------HEDYIAVSDLNGENIKIIVSRRMDPTI-NLH--HVFA 749 (1416)
Q Consensus 691 v~~~l~~-----P~gLaiD~~-~~rLYWtD~------------~~~~I~~~~ldG~~r~~v~~~~~~p~~-~l~--~P~~ 749 (1416)
+...+.. ...|++|+. .+.||.+-. ....|++..-.|..-+.+.. .. |.. .+. ...+
T Consensus 268 ~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~-gl-p~~~~~~~~~~~~ 345 (394)
T 3b7f_A 268 IGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR-GL-PTDQAWLTVKRQA 345 (394)
T ss_dssp GGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB-TS-CCSSCCCCCCTBS
T ss_pred CCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC-CC-CCccccceEEEEE
Confidence 2222322 246778764 466777521 12356655433444444432 21 110 000 0134
Q ss_pred EEEe--c-CcEEEeecCCCeeEEecccCCCceEEEEeCCCCCCeeeeee
Q psy6572 750 LAVF--E-DHLFWTDWEMKSIERCDKYTGKNCTSVVKNLVHKPMDLRVY 795 (1416)
Q Consensus 750 lav~--~-d~LYwtD~~~~~I~~~nk~tG~~~~~l~~~~~~~p~~I~v~ 795 (1416)
|++. + +.||+.- ..+.|++.. ..|..-+.+. ..+...+.|++.
T Consensus 346 ~~~~p~~~~~l~~g~-~~g~l~~S~-D~G~tW~~~~-~~lp~~~~v~~~ 391 (394)
T 3b7f_A 346 MTADAHAPVGVYFGT-TGGEIWASA-DEGEHWQCIA-SHLPHIYAVQSA 391 (394)
T ss_dssp EEECCSSSCCEEEEC-TTSCEEEES-STTSBCEEEE-CSCSCEEEEEEE
T ss_pred EEECCCCCCEEEEEe-CCCeEEEEC-CCCCCceEcc-cCCCCeeEEEEe
Confidence 6663 2 4577642 345566553 3455555554 444444555544
No 366
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.55 E-value=17 Score=42.56 Aligned_cols=173 Identities=12% Similarity=0.049 Sum_probs=88.5
Q ss_pred cEEEEecCC-CCeEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEE
Q psy6572 592 SIRRSCNNS-QPELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYW 668 (1416)
Q Consensus 592 ~I~r~~l~s-~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYW 668 (1416)
.|+..++.+ ....... ...+..|+ + .+++.++-...+.|.+.++........+........+|++++ ++|+.
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~~l~--~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s 228 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVLCLQ--Y-DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVT 228 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEE--C-CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEEEEE--E-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEE
Confidence 566666652 2111111 23334444 4 466667777778899988875443333333344566777753 45554
Q ss_pred eeCCCCceEEEEecCCCCCE---EEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccc
Q psy6572 669 TDWGQNAHIGKAKMDGSNPK---VIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLH 745 (1416)
Q Consensus 669 tD~g~~~~I~ra~mDGs~r~---vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~ 745 (1416)
... ...|...++...... ..+.........|+++ ...|+.+ ...+.|...++........+... ..
T Consensus 229 ~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~------~~ 297 (435)
T 1p22_A 229 CSK--DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSA-SGDRTIKVWNTSTCEFVRTLNGH------KR 297 (435)
T ss_dssp EET--TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEE-ETTSEEEEEETTTCCEEEEEECC------SS
T ss_pred eeC--CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEE-eCCCeEEEEECCcCcEEEEEcCC------CC
Confidence 443 235666666544332 2222223334566663 4455444 34577888887544433333322 22
Q ss_pred cceeEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 746 HVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 746 ~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
....+++ .+.++++-...+.|...+..+|.....+
T Consensus 298 ~v~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 298 GIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp CEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred cEEEEEe-CCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 3345555 4455555555666666665555544333
No 367
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.37 E-value=3.6 Score=52.88 Aligned_cols=158 Identities=8% Similarity=0.031 Sum_probs=88.5
Q ss_pred cccceeeeeecC--CCeEEEeeccCCCccEEEEecCCC-CeEEee----cCCCceEEEEccC-CcEEEeeCCCCeEEEee
Q psy6572 566 QTNAVGLDFDWV--DNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP----ATSPDGLTVDWVG-RNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 566 l~~~~~l~~D~~--~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~----l~~p~gLAvD~~~-~~LYwtD~~~~~I~v~~ 637 (1416)
...+.+|+|.+. ++.|+..... +.|+...+.+. ...+.. ...+..|++.+.. ++++++-...+.|.+.+
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred cCceEEEEecCCCCCCEEEEEeCC---CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 345678888765 4455544433 36777766632 222222 4556778887763 55666666778899988
Q ss_pred cCCC--ceEEEEcCCCCCcceeeecCC------------cceEEEeeCCCCceEEEEecCCCCCE-EEe---ecCCCCCe
Q psy6572 638 LDGR--FRKVLINKGLQEPRGIALNPA------------YGYMYWTDWGQNAHIGKAKMDGSNPK-VII---SKNLSWPN 699 (1416)
Q Consensus 638 ldG~--~~~vLi~~~l~~P~gIavDp~------------~g~LYWtD~g~~~~I~ra~mDGs~r~-vlv---~~~l~~P~ 699 (1416)
+... .....+.........|++.|. .+.++.+-.. ...|...++...... .++ ...-....
T Consensus 130 l~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 130 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp CCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred eecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 8755 222333344556788999885 3444444322 235655555543322 222 12234457
Q ss_pred eEEeecCC--CeEEEecCCCCeEEEEeCCC
Q psy6572 700 ALTISYET--NELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 700 gLaiD~~~--~rLYWtD~~~~~I~~~~ldG 727 (1416)
+|++.+.. ++++.+-...+.|...++..
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 88887652 55555544556676666544
No 368
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=92.06 E-value=0.078 Score=44.51 Aligned_cols=37 Identities=22% Similarity=0.526 Sum_probs=28.6
Q ss_pred ccCCcCCCCCccc--eee-----ecCCeeeecCCCCcEEecCCCceEe
Q psy6572 494 VDTNECLDRPCSH--YCR-----NTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 494 ~didEC~~~~Csq--~C~-----nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
.++|||+..||.+ .|. +..++|+|.|++||. |+.|..
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~ 49 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN 49 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence 3689999888877 784 567799999999997 667754
No 369
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.05 E-value=4 Score=47.28 Aligned_cols=193 Identities=9% Similarity=0.044 Sum_probs=103.4
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeec-CCCceEE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL-DGRFRKV 645 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l-dG~~~~v 645 (1416)
+..++|.+.++.|..+-...+ +.|+..++.+... ..+. -..+.+|++.+.+..|..+. .+.|.+... .|.....
T Consensus 136 ~~~v~fSpDg~~la~as~~~d-~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVP-AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGSCIAR 212 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSS-CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCC-CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--ceeEEEEEeccCcceee
Confidence 446788887777776544322 3677777663222 1222 55678899988666665443 344555553 3443322
Q ss_pred EEc-CCCCCcceeeecCCcceEEEeeCCCC--ceEEEEecCCCCCEEE----eecCCCCCeeEEeecCCCeEEEecCCCC
Q psy6572 646 LIN-KGLQEPRGIALNPAYGYMYWTDWGQN--AHIGKAKMDGSNPKVI----ISKNLSWPNALTISYETNELFWGDAHED 718 (1416)
Q Consensus 646 Li~-~~l~~P~gIavDp~~g~LYWtD~g~~--~~I~ra~mDGs~r~vl----v~~~l~~P~gLaiD~~~~rLYWtD~~~~ 718 (1416)
... ..-...++|++.|...+|..+..... ..|...++.......+ +.......+.|++.+....|. +-...+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la-sgs~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV-LASNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE-EEETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE-EEcCCC
Confidence 221 22234678888888776666543222 2344444443332221 222344457888886544444 433456
Q ss_pred eEEEEeCCC-CceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEec
Q psy6572 719 YIAVSDLNG-ENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 719 ~I~~~~ldG-~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~n 771 (1416)
.|...++.. +..+.++.++ .....+|++. .+.++.|-...++|...+
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH------~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAH------SFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp CEEEEETTTTEEEEEETTSS------SSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCcEEEEecCcc------cCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 787777643 3333333322 2345677774 556666666666655443
No 370
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.02 E-value=2.7 Score=54.16 Aligned_cols=190 Identities=11% Similarity=0.065 Sum_probs=109.8
Q ss_pred cCCCeEEEeeccCCC--ccEEEEec---C-C--CCeEEee---cC------CCceEEEE-ccCCcEEEeeCCC----CeE
Q psy6572 576 WVDNCLYWSDVTMHG--SSIRRSCN---N-S--QPELLFP---AT------SPDGLTVD-WVGRNLYWCDKGL----DTI 633 (1416)
Q Consensus 576 ~~~~~LYwtD~~~~~--~~I~r~~l---~-s--~~~~l~~---l~------~p~gLAvD-~~~~~LYwtD~~~----~~I 633 (1416)
+.++.+||+-....+ ..++|... . . ..++|+. +. ...++++. +-++.|.|+.... .+|
T Consensus 124 ~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l 203 (751)
T 2xe4_A 124 VYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTI 203 (751)
T ss_dssp EETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEE
T ss_pred EECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEE
Confidence 457788888554321 34677765 4 3 4567665 21 23456777 7777777665432 259
Q ss_pred EEeecCCC-ceEEEEcCCCCC-cceeeecCCcceEEEeeCCC--C-ceEEEEecCCCC--CEEEeec-CCCCCeeEEeec
Q psy6572 634 EVAKLDGR-FRKVLINKGLQE-PRGIALNPAYGYMYWTDWGQ--N-AHIGKAKMDGSN--PKVIISK-NLSWPNALTISY 705 (1416)
Q Consensus 634 ~v~~ldG~-~~~vLi~~~l~~-P~gIavDp~~g~LYWtD~g~--~-~~I~ra~mDGs~--r~vlv~~-~l~~P~gLaiD~ 705 (1416)
++.++++. .. + ...+.. ..+++..|....||++.... . .+|++..+.+.. .+.+... .-.+-.++++.+
T Consensus 204 ~v~dl~~g~~~--l-~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 204 EFKRISDPSQT--I-ADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp EEEETTCTTCC--C-CCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred EEEECCCCCEe--C-CccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 99999876 41 1 111111 34678888877788775422 2 479999998764 2334332 222334677777
Q ss_pred CCCeEEEecCC--CCeEEEEeCCCC--ce--EEEEeccCCCCcccccceeEE-EecCcEEEeec----CCCeeEEecccC
Q psy6572 706 ETNELFWGDAH--EDYIAVSDLNGE--NI--KIIVSRRMDPTINLHHVFALA-VFEDHLFWTDW----EMKSIERCDKYT 774 (1416)
Q Consensus 706 ~~~rLYWtD~~--~~~I~~~~ldG~--~r--~~v~~~~~~p~~~l~~P~~la-v~~d~LYwtD~----~~~~I~~~nk~t 774 (1416)
...+|+|+-.. ...|+.+++++. .. +.|+... ...-+++. ..+++|||+.. ....|++++..+
T Consensus 281 Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~------~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 281 DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE------KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC------TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC------CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 77788887542 447888888764 22 3333221 12224555 34777777533 235677776543
No 371
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=91.93 E-value=0.082 Score=43.97 Aligned_cols=36 Identities=31% Similarity=0.827 Sum_probs=28.8
Q ss_pred cCCcCCCC---Cccc--eee--ecCCeeeecCCCCcEEecCCCceEe
Q psy6572 495 DTNECLDR---PCSH--YCR--NTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 495 didEC~~~---~Csq--~C~--nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
+|++|... +|.+ +|+ +..++|+|.|++||+ |..|..
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 57788754 8876 798 788999999999996 667754
No 372
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=91.92 E-value=5.3 Score=47.70 Aligned_cols=119 Identities=11% Similarity=-0.099 Sum_probs=75.6
Q ss_pred cceeeeeecCCCeEEE---eeccCCCccEEEEecC-C-----CC-e---EEee----cCCCceEEEEccCCcEEEeeCCC
Q psy6572 568 NAVGLDFDWVDNCLYW---SDVTMHGSSIRRSCNN-S-----QP-E---LLFP----ATSPDGLTVDWVGRNLYWCDKGL 630 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYw---tD~~~~~~~I~r~~l~-s-----~~-~---~l~~----l~~p~gLAvD~~~~~LYwtD~~~ 630 (1416)
.+.+|+|.+.++.|++ +-.. .+.|+...+. . .. + .+.. ...+.+|++.+..++++.+-...
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEY--GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTT--EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred cccEEEEcCCCCEEEEEEeccCC--CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 4778999998888886 3222 2356666554 1 11 1 1111 34577888888778888888888
Q ss_pred CeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE
Q psy6572 631 DTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI 690 (1416)
Q Consensus 631 ~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl 690 (1416)
++|.+.++...............+.+|+..|...+|+..... ..|...++.|.....+
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d--g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN--GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT--SCEEEECTTCCEEEEE
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC--CcEEEEccCCcccccc
Confidence 899999987653322222224568899999997677766532 3677777775444333
No 373
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.77 E-value=21 Score=40.43 Aligned_cols=171 Identities=8% Similarity=-0.060 Sum_probs=91.4
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe-EEee----cCCCceEEEEcc
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE-LLFP----ATSPDGLTVDWV 619 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~-~l~~----l~~p~gLAvD~~ 619 (1416)
...|+..++.... ..+......+.+|+|.+.++.|+-.... +.|+...+..... .+.. ...+..|++.+.
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 4456666665443 2233344567789998877777655433 3666666552111 1110 223445666554
Q ss_pred C---------CcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC-CCCCEE
Q psy6572 620 G---------RNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD-GSNPKV 689 (1416)
Q Consensus 620 ~---------~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD-Gs~r~v 689 (1416)
. +.++.+-...++|.+.+..+....++. ........|++.|...+|.-... ...|..-++. ......
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~--dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGGK--DKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEET--TCEEEEEESSCCSSCSE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEcC--CCeEEEEECCCCcccce
Confidence 4 245556666778888886655444443 33456788999998666655542 2356555652 222222
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
.+. .-...+.|++.+....|... ..+.|...++.
T Consensus 251 ~~~-~~~~v~~v~~sp~~~~la~~--~d~~v~iw~~~ 284 (343)
T 2xzm_R 251 EFD-AGSTINQIAFNPKLQWVAVG--TDQGVKIFNLM 284 (343)
T ss_dssp EEE-CSSCEEEEEECSSSCEEEEE--ESSCEEEEESS
T ss_pred eec-CCCcEEEEEECCCCCEEEEE--CCCCEEEEEeC
Confidence 221 11235678887654433322 23456666654
No 374
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.74 E-value=9.8 Score=43.98 Aligned_cols=202 Identities=12% Similarity=0.051 Sum_probs=107.5
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCe-EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPE-LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~-~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
...+.+|+|.+.++.|+-.... +.|+..++.+ ... ++.. ...+..+++.+.+..| .+-...+.|.+.++....
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D---~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-as~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQD---GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV-ACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE-EECCSSSCCEEEECCCCS
T ss_pred ccEEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE-EEeeCCCcEEEEECCCCc
Confidence 3456778888876666554433 3677777662 222 2222 4557788888765544 444455666666654321
Q ss_pred --------eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec-----CCCCCeeEEeecCCCe
Q psy6572 643 --------RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK-----NLSWPNALTISYETNE 709 (1416)
Q Consensus 643 --------~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~-----~l~~P~gLaiD~~~~r 709 (1416)
.+++ .........+++.|..+.++++-... ..|..-++.......++.. .......|++.+.++.
T Consensus 142 ~~~~~~~~~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 142 DRDGNMPVSRVL-TGHKGYASSCQYVPDQETRLITGSGD-QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp SCCCSSTTCCBC-CCCSSCCCCCBCCSSSSSCEEEECTT-SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred cccCCccceeec-cCCCcceEEEEEecCCCCEEEEECCC-CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC
Confidence 1111 12223355666777655444443222 3555555554433333321 1223456777665677
Q ss_pred EEEecCCCCeEEEEeCC-C-CceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 710 LFWGDAHEDYIAVSDLN-G-ENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 710 LYWtD~~~~~I~~~~ld-G-~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
++.+-...+.|...++. + ...++ +.+. -....+|++. .+.++.|-...+.|..-+..+|....+
T Consensus 220 ~l~sgs~D~~v~~wd~~~~~~~~~~-~~~h------~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 220 MFISGSCDTTVRLWDLRITSRAVRT-YHGH------EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEEEEETTSCEEEEETTTTCCCCEE-ECCC------SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCeEEEEECCCCCcceEE-ECCc------CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 77776666777777764 2 22222 2222 2334567774 456677777777777666655554433
No 375
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.50 E-value=13 Score=46.81 Aligned_cols=201 Identities=11% Similarity=-0.003 Sum_probs=114.5
Q ss_pred ccccceeeeeecCCCeEEEeeccCCCccEEEEecCC-C--C-e---EEee-cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-Q--P-E---LLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~--~-~---~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
....+.+|++.+.+..++.+-... +.|+...+.+ . . . .+.. ...+..|++.+.++ +..+-...+.|.+-
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D--~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRD--KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDGELRLW 457 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETT--SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEE
T ss_pred CCceeEEEEecCCCCCEEEEEeCC--CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-EEEEEeCCCcEEEE
Confidence 344567888887766676665553 3677777661 1 1 1 1222 45567788887554 44566667889999
Q ss_pred ecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC---CCCCeeEEeecCCC-eEEE
Q psy6572 637 KLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN---LSWPNALTISYETN-ELFW 712 (1416)
Q Consensus 637 ~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~---l~~P~gLaiD~~~~-rLYW 712 (1416)
++........+........+|++.|...+|+-.... ..|..-++.+.....+.... ..+...|++.+... .++.
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D--~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD--RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC--CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 886544333333444567899999987777655432 24555555554333333221 22345677765432 3444
Q ss_pred ecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 713 GDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 713 tD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
+-...+.|...++........+..+ .....+|++. .+.++.+-...+.|..-+..++.
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h------~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGH------TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCC------CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4445567777777655444444432 2334566664 45666666666666655544443
No 376
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.45 E-value=22 Score=40.24 Aligned_cols=142 Identities=11% Similarity=0.033 Sum_probs=80.2
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
...+.+|+|.+.++.|+..... +.|....++ ...+.+.. ...+.+|++.+.+ +++.+-...+.|.+.++..
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFD---ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETT---SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECT
T ss_pred CCcEEEEEECCCCCEEEEEECC---CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCC
Confidence 3457789998877776655443 256655555 32222222 4456788888744 4555666677888888765
Q ss_pred Cce-E--EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCE--EEeecCCCCCeeEEeecCCCeEEEe
Q psy6572 641 RFR-K--VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPK--VIISKNLSWPNALTISYETNELFWG 713 (1416)
Q Consensus 641 ~~~-~--vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~--vlv~~~l~~P~gLaiD~~~~rLYWt 713 (1416)
... . ..+.........|++.|...+|....... .|...++...... ..+........+|++++...+|..+
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD--TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS--CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC--cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 432 2 12223345578899999877776665433 3443333332211 1122233456788888755555444
No 377
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.35 E-value=8.6 Score=44.40 Aligned_cols=180 Identities=9% Similarity=0.016 Sum_probs=92.5
Q ss_pred CCeEEEEe---cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-----cC
Q psy6572 539 PPNLLFTN---KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-----AT 609 (1416)
Q Consensus 539 ~~~li~s~---~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-----l~ 609 (1416)
..+|+++. ...|+..++.... ...+.....+.+|+|.+.++.|...... .+.++...+...+... ..
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~----~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS----SLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS----CEEEEETTTCCEEEEECCCCTTE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce----eEEEEEeccCcceeeeecCCCCC
Confidence 34454443 2456666666544 2233344567889999877776655322 4666555533222221 22
Q ss_pred CCceEEEEccCCcEEEeeCCC-C--eEEEeecCCCceEE----EEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEec
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGL-D--TIEVAKLDGRFRKV----LINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKM 682 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~-~--~I~v~~ldG~~~~v----Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~m 682 (1416)
.+..|++.+.+..|..+.... . .|...++....... .+........+|++.|...+|...... ..|...++
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D--~~V~iwd~ 298 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND--NSIALVKL 298 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT--SCEEEEET
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC--CEEEEEEC
Confidence 356788887666665543322 2 34445544333222 122344556889999987666655432 24555555
Q ss_pred CCCC-CEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC
Q psy6572 683 DGSN-PKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL 725 (1416)
Q Consensus 683 DGs~-r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l 725 (1416)
.... ...++...-...++|++.+ .+++..+-..-+.|...++
T Consensus 299 ~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 299 KDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp TTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 3221 1222222344567888875 3444333333344444443
No 378
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.30 E-value=21 Score=39.58 Aligned_cols=200 Identities=9% Similarity=-0.041 Sum_probs=106.1
Q ss_pred cccceeeeeecCCCeEEEeeccCCCccEEEEecC-C--CCeEEe----e-cCCCceEEEEccCCcEEEeeCCCCeEEEee
Q psy6572 566 QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S--QPELLF----P-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAK 637 (1416)
Q Consensus 566 l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s--~~~~l~----~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ 637 (1416)
...+.+|+|.+..+.+..+-... +.|+..++. . ...... . ...+..|++.+.+..|+ +-...+.|.+..
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~-s~~~d~~i~~~~ 114 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRD--KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWD 114 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETT--SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEE
T ss_pred cCCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE-EEcccccceEEe
Confidence 34577899988766666654443 367776665 2 111111 1 34567788887555554 444567788777
Q ss_pred cCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC-CCCCeeEEeecCCC-eEEEecC
Q psy6572 638 LDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN-LSWPNALTISYETN-ELFWGDA 715 (1416)
Q Consensus 638 ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~-l~~P~gLaiD~~~~-rLYWtD~ 715 (1416)
+..................+...+...+|+..... ..|...++.+..+.++.... ......+++.+... .++.+-.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d--~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred ecccceeeeecCCCCceeEEEEeecCccceeecCC--CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 77666555554555566677777776666555422 23444444444333332221 22334555544333 3444433
Q ss_pred CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 716 HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 716 ~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
..+.|...++........+... -....+|++. .+.++++-...+.|...+..++.
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGH------TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCEEEEEECCCCceeeEecCC------CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 4456766676554443333322 2234566664 34555555555666555544443
No 379
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=91.08 E-value=0.053 Score=46.55 Aligned_cols=40 Identities=25% Similarity=0.727 Sum_probs=27.9
Q ss_pred cccccCCCCCCcccc----cceecCCceEEeeCCCceecCCCCCccccCCcC
Q psy6572 452 VNECNVSHGGQLCAH----ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNEC 499 (1416)
Q Consensus 452 i~eC~~~~~~~~Cs~----~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC 499 (1416)
+++|..++ |.+ .|++++++|+|.|++||.+ +..|...++|
T Consensus 11 ~d~C~snP----C~nga~gtC~~~~g~y~C~C~~Gy~~----G~~C~~~~~C 54 (61)
T 2k2s_B 11 PAACSSNP----CGPEAAGTCKETNSGYICRCNQGYRI----SLDGTGNVTC 54 (61)
T ss_dssp CCHHHHCS----SCSSSCCEEEECSSEEEEECCTTEEE----EECSSSCEEE
T ss_pred CCcCcCCC----CcCCCccccccCCCceEeECCCCCcc----CCCCCCCCEe
Confidence 45665333 653 6999999999999999972 2346655554
No 380
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=91.07 E-value=0.15 Score=39.28 Aligned_cols=29 Identities=28% Similarity=0.767 Sum_probs=22.1
Q ss_pred cccccCCCCCCcccc--cceecCCceEEeeCCCce
Q psy6572 452 VNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQ 484 (1416)
Q Consensus 452 i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~ 484 (1416)
+++|...+ |.+ .|++++++|+|.|++||.
T Consensus 3 ~d~C~~~p----C~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 3 GDQCESNP----CLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCTTTTCC----CCTTCEEEEETTEEEEECCTTCC
T ss_pred cccCCCCC----CCCCCEeEcCCCceEeECCCCCc
Confidence 45664332 654 699999999999999994
No 381
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=90.74 E-value=26 Score=44.97 Aligned_cols=191 Identities=9% Similarity=0.017 Sum_probs=99.5
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee----------cCCCceEEEEccCCc-EEEeeCCCCeEEEe
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----------ATSPDGLTVDWVGRN-LYWCDKGLDTIEVA 636 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----------l~~p~gLAvD~~~~~-LYwtD~~~~~I~v~ 636 (1416)
+.+|..|. .+.|++. ... +.|.++... ...+.+.. ...+.+|+.|. .++ ||+. ...+.|.+.
T Consensus 359 V~~i~~d~-~g~lWiG-t~~--~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWig-t~~~Gl~~~ 432 (795)
T 4a2l_A 359 VSCIVEDK-DKNLWIG-TND--GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIG-THAGGLSIL 432 (795)
T ss_dssp EEEEEECT-TSCEEEE-ESS--SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEE-ETTTEEEEE
T ss_pred eEEEEECC-CCCEEEE-ECC--CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEE-eCcCceeEE
Confidence 56677765 3445443 332 257777665 22222211 23456788884 566 5554 334568888
Q ss_pred ecCCCceEEEEcC----CCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec----CC--CCCeeEEeecC
Q psy6572 637 KLDGRFRKVLINK----GLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK----NL--SWPNALTISYE 706 (1416)
Q Consensus 637 ~ldG~~~~vLi~~----~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~----~l--~~P~gLaiD~~ 706 (1416)
+..+...+.+... ....+.+|+.|+. |.||++.. ..|.+.+......+.+... .+ .....|+.| .
T Consensus 433 d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d-~ 507 (795)
T 4a2l_A 433 HRNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGTL---SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD-S 507 (795)
T ss_dssp ETTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEES---SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC-T
T ss_pred eCCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEec---CceeEEeCCCCeEEEccccccccccCCceEEEEEEC-C
Confidence 8765443333221 1235678888874 77777664 2577776654322222211 12 345678888 4
Q ss_pred CCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccCC
Q psy6572 707 TNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTG 775 (1416)
Q Consensus 707 ~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG 775 (1416)
.++||++.. +.|.+++..+... .+......+........+|... .+.|+++... .|.+.+..++
T Consensus 508 ~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~ 572 (795)
T 4a2l_A 508 HKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDK 572 (795)
T ss_dssp TCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTT
T ss_pred CCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCC
Confidence 778877765 5678887765443 2221000011111234556554 4556555432 6777665433
No 382
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.22 E-value=16 Score=48.04 Aligned_cols=199 Identities=13% Similarity=0.038 Sum_probs=112.7
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee---cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF- 642 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~- 642 (1416)
..+.+|+|++..+.|...... +.|+.....+. +.+.. -..+..|++.+ +.+..+-...+.|.+-++....
T Consensus 18 ~~V~~lafspdg~~lAsgs~D---g~I~lw~~~~~-~~~~~~~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVT---GEVHIYGQQQV-EVVIKLEDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETT---SEEEEECSTTC-EEEEECSSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCSE
T ss_pred CCcEEEEECCCCCEEEEEeCC---CEEEEEeCCCc-EEEEEcCCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCcE
Confidence 456788999887766655443 36666655422 22222 34567888888 4444455567889999986543
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEe-----------ecCCCCCeeEEeecCCCeEE
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVII-----------SKNLSWPNALTISYETNELF 711 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv-----------~~~l~~P~gLaiD~~~~rLY 711 (1416)
...+. .-.....|+++|...+|+..... ..|...++.+.....+. .........|++.+....++
T Consensus 92 ~~~~~--~~~~V~~v~~sp~g~~l~sgs~d--g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 92 LTTVF--VPGKITSIDTDASLDWMLIGLQN--GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEEEE--CSSCEEEEECCTTCSEEEEEETT--SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEEEc--CCCCEEEEEECCCCCEEEEEcCC--CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 33443 22457899999998888887643 35666666654322111 11234567888887554555
Q ss_pred EecCCCCeEEEEeCCCCceEEEEeccCCCCc------------ccccceeEEEe-cCcEEEeecCCCeeEEecccCCC
Q psy6572 712 WGDAHEDYIAVSDLNGENIKIIVSRRMDPTI------------NLHHVFALAVF-EDHLFWTDWEMKSIERCDKYTGK 776 (1416)
Q Consensus 712 WtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~------------~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~tG~ 776 (1416)
.+-...+.| ..++........+.....++. ......+|++. .+.++.+-...+.|..-+..+|.
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 555556777 777765443333322100000 01224566663 45566666566666655554543
No 383
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.11 E-value=15 Score=41.07 Aligned_cols=184 Identities=7% Similarity=-0.015 Sum_probs=86.3
Q ss_pred CCeEEEEe-cEEEEEEecCCcc-eEEecccccceeeee--ecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCCCce
Q psy6572 539 PPNLLFTN-KYYIREVTQAGVM-TIRIHNQTNAVGLDF--DWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATSPDG 613 (1416)
Q Consensus 539 ~~~li~s~-~~~I~~i~l~g~~-~~~~~~l~~~~~l~~--D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~p~g 613 (1416)
..+|+.+. ...|+..++.... ..+......+.+|+| .+....|+..... +.|+..++. ......... ....
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~-~~~~ 173 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSNPMMVLQL-PERC 173 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT---SEEEEECSSCSSCSEEEEC-SSCE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCcEEEEEec-CCCc
Confidence 33444433 4557777776655 333334456778888 5544444444333 367777776 222222221 2245
Q ss_pred EEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcC--CCCCcceeeecCCcce----EEEeeCCCCceEEEEecCCCC-
Q psy6572 614 LTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINK--GLQEPRGIALNPAYGY----MYWTDWGQNAHIGKAKMDGSN- 686 (1416)
Q Consensus 614 LAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~--~l~~P~gIavDp~~g~----LYWtD~g~~~~I~ra~mDGs~- 686 (1416)
+++++....++.+. ..+.|.+.++........... .......+++.+.... |+.... ...|...+++...
T Consensus 174 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 174 YCADVIYPMAVVAT-AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI--EGRVAIHYINPPNP 250 (368)
T ss_dssp EEEEEETTEEEEEE-GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET--TSEEEEEESSCSCH
T ss_pred eEEEecCCeeEEEe-CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC--CCcEEEEecCCCCc
Confidence 56666666555544 345666667665443322211 1111222322222111 222221 2234444444331
Q ss_pred ---CEEEeecC-----------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCce
Q psy6572 687 ---PKVIISKN-----------LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENI 730 (1416)
Q Consensus 687 ---r~vlv~~~-----------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r 730 (1416)
...+.... ......|++.+....|+.+. ..+.|...++.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDARTK 307 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEE
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCcE
Confidence 11111100 11467888887555555543 456788888764433
No 384
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.09 E-value=15 Score=47.33 Aligned_cols=188 Identities=10% Similarity=0.087 Sum_probs=99.9
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEe--e--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLF--P--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~--~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
.+.+|..|. .+.|++.... ..|+++... ...+.+. . ...+.+|+.|. .++||+... ..|.+.+..+..
T Consensus 408 ~v~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 408 SVLCSLKDS-EGNLWFGTYL---GNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKK 480 (781)
T ss_dssp BEEEEEECT-TSCEEEEETT---EEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSS
T ss_pred ceEEEEECC-CCCEEEEecc---CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCe
Confidence 456677764 4455554322 257777665 2222221 1 23466788874 566766654 578888876543
Q ss_pred eEEEEcCC-----CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEee-cCC--CCCeeEEeecCCCeEEEec
Q psy6572 643 RKVLINKG-----LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIIS-KNL--SWPNALTISYETNELFWGD 714 (1416)
Q Consensus 643 ~~vLi~~~-----l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~-~~l--~~P~gLaiD~~~~rLYWtD 714 (1416)
.+.+.... ...+++|++|+. |.|+++..+. .|.+.+.++...+.+.. ..+ ....+|+.|. .++|+++.
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt~~~--Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T 556 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSE-GRFWIGTFGG--GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQMWLAT 556 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTT-CCEEEEESSS--CEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCEEEEE
T ss_pred EEecccCcccccccceeEEEEEcCC-CCEEEEEcCC--CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCEEEEE
Confidence 32232211 245788999975 7787776432 47777665543333322 123 2345777774 67777765
Q ss_pred CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecc
Q psy6572 715 AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 715 ~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk 772 (1416)
. .+.|.+.+......+.+....+ +.-....+|... .+.|+++. .+.|.+++.
T Consensus 557 ~-~Glv~~~d~~~~~~~~~~~~~g---l~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~ 609 (781)
T 3v9f_A 557 G-EGLVCFPSARNFDYQVFQRKEG---LPNTHIRAISEDKNGNIWAST--NTGISCYIT 609 (781)
T ss_dssp T-TEEEEESCTTTCCCEEECGGGT---CSCCCCCEEEECSSSCEEEEC--SSCEEEEET
T ss_pred C-CCceEEECCCCCcEEEccccCC---CCCceEEEEEECCCCCEEEEc--CCceEEEEC
Confidence 4 3333777765544443332221 111234567665 46666654 234555544
No 385
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.83 E-value=8.6 Score=41.70 Aligned_cols=134 Identities=15% Similarity=0.019 Sum_probs=78.9
Q ss_pred cEEEeeCCCCeEEEeecCCCc------eEEEE-cCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC-C------CC
Q psy6572 622 NLYWCDKGLDTIEVAKLDGRF------RKVLI-NKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG-S------NP 687 (1416)
Q Consensus 622 ~LYwtD~~~~~I~v~~ldG~~------~~vLi-~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG-s------~r 687 (1416)
.||.++.. +|++..+-... +.+.+ ..++...+.||++| +|.||-+. ...|++.++.. . ..
T Consensus 6 ~l~~v~~d--~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV~---~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 6 MLRGVYQD--KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGVL---NDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CEEEEETT--EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEEE---TTEEEEESCCCSTTCCHHHHC
T ss_pred EEEEEeCC--cEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEEe---CCeEEEECCCCCCcccccccc
Confidence 45555553 66666653222 22333 33577888999999 89999994 33788888732 1 13
Q ss_pred EEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC--CCCce-----EEEEeccCCCCcccccceeEEE-ecCcEEE
Q psy6572 688 KVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL--NGENI-----KIIVSRRMDPTINLHHVFALAV-FEDHLFW 759 (1416)
Q Consensus 688 ~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l--dG~~r-----~~v~~~~~~p~~~l~~P~~lav-~~d~LYw 759 (1416)
+.|-......-..|.+| .++.||.+ ..+.|++++. +|... .+|.... +..-..|.+ .++.||-
T Consensus 80 t~IG~~Gw~~F~a~~fD-~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~g------w~~~~~lff~p~G~Lya 150 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFD-PNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGG------WSGFKFLFFHPNGYLYA 150 (236)
T ss_dssp EEEECSCGGGCSEEEEC-TTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSS------GGGEEEEEECTTSCEEE
T ss_pred cEecccccccceEEEEC-CCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCC------CCceEEEEECCCceEEE
Confidence 44444333335688999 59999999 3489999985 33321 2222221 344445555 3667776
Q ss_pred eecCCCeeEEecc
Q psy6572 760 TDWEMKSIERCDK 772 (1416)
Q Consensus 760 tD~~~~~I~~~nk 772 (1416)
.. .+.+++-.+
T Consensus 151 v~--dg~lyr~~~ 161 (236)
T 1tl2_A 151 VH--GQQFYKALP 161 (236)
T ss_dssp EE--TTEEEEECC
T ss_pred Ee--CCcEEecCC
Confidence 66 444655433
No 386
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=89.70 E-value=0.85 Score=58.05 Aligned_cols=121 Identities=12% Similarity=0.001 Sum_probs=73.9
Q ss_pred cEEEEEEecCCcc-eEEecccc----cceeeeeecCCCeEEEeeccC------CCccEEEEecCCCCeEE--ee-cCCCc
Q psy6572 547 KYYIREVTQAGVM-TIRIHNQT----NAVGLDFDWVDNCLYWSDVTM------HGSSIRRSCNNSQPELL--FP-ATSPD 612 (1416)
Q Consensus 547 ~~~I~~i~l~g~~-~~~~~~l~----~~~~l~~D~~~~~LYwtD~~~------~~~~I~r~~l~s~~~~l--~~-l~~p~ 612 (1416)
...|+.+++.+.. ..+..... .+..++|.+.+++|+++.... ....|+.+.+.+... + .. ...+.
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~-~~~~~l~~~~~ 113 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF-VRGNELPRPIQ 113 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCSSBC
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc-ccceecCcccc
Confidence 3457777776655 33333222 267888999888887765421 013677777763211 1 11 23466
Q ss_pred eEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCCC------------------CCcceeeecCCcceEEEee
Q psy6572 613 GLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGL------------------QEPRGIALNPAYGYMYWTD 670 (1416)
Q Consensus 613 gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l------------------~~P~gIavDp~~g~LYWtD 670 (1416)
.+++.+.++.|.++. .+.|.+.++.+.....|...+. ....+++..|...+|+++.
T Consensus 114 ~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 114 YLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp CEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred cceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 788888888888874 4588888887655444432221 2235889999888877753
No 387
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.27 E-value=24 Score=41.09 Aligned_cols=201 Identities=11% Similarity=-0.034 Sum_probs=101.4
Q ss_pred cccceeeeeec-CCCeEEEeeccCCCccEEEEecCC---C--C--eEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 566 QTNAVGLDFDW-VDNCLYWSDVTMHGSSIRRSCNNS---Q--P--ELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 566 l~~~~~l~~D~-~~~~LYwtD~~~~~~~I~r~~l~s---~--~--~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
...+.+|+|.+ ....|+-.. .. +.|+...+.+ . . ..... ...+..|++.+. +.++++-...+.|.+.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s-~d--g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGS-DQ--GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPN-FDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEE-TT--SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTT-SSEEEEEETTSEEEEE
T ss_pred CCceEEEEECCCCCCEEEEec-CC--ceEEEeECcccccCcccceeeeccCCCCEEEEEEeCC-CCEEEEEeCCCEEEEE
Confidence 35677888888 444444333 32 3666666541 1 1 11112 556778888864 4455555566778777
Q ss_pred ec----CCCceEEEEcCCCCCcceeeec----------------CCcceEEEeeCCCCceEEEEecCCCCCEEEeec--C
Q psy6572 637 KL----DGRFRKVLINKGLQEPRGIALN----------------PAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK--N 694 (1416)
Q Consensus 637 ~l----dG~~~~vLi~~~l~~P~gIavD----------------p~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~ 694 (1416)
++ .|....++... ..+.+++. +...+|+.... ...|...++........+.. .
T Consensus 139 d~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCE---CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN--LSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEETTEEEEEEEE---EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET--TSEEEEEETTTCCEEEEEECCGG
T ss_pred EeccccCCceeeccccc---eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCeeeEEEccCCC
Confidence 76 44433322211 22333333 33334444432 23566666654443333332 3
Q ss_pred CCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEe-ccCCCCcccccceeEEEe-----cCcEEEeecCCCeeE
Q psy6572 695 LSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVS-RRMDPTINLHHVFALAVF-----EDHLFWTDWEMKSIE 768 (1416)
Q Consensus 695 l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~-~~~~p~~~l~~P~~lav~-----~d~LYwtD~~~~~I~ 768 (1416)
......|++.+....|+ +-...+.|...++........+. .. -....+|++. .+.++++-...+.|.
T Consensus 214 ~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 214 HGAVSSICIDEECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGD------HAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp GCCEEEEEECTTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTT------CEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred CCceEEEEECCCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCC------CCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 45678899986544444 44445677777765432222221 11 1122344332 233555555566676
Q ss_pred EecccCCCceEEEE
Q psy6572 769 RCDKYTGKNCTSVV 782 (1416)
Q Consensus 769 ~~nk~tG~~~~~l~ 782 (1416)
..+..++.....+.
T Consensus 287 iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 287 IWNFVKGHCQYAFI 300 (437)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEEcCCCcEEEEEE
Confidence 66665665555444
No 388
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.38 E-value=38 Score=38.29 Aligned_cols=188 Identities=10% Similarity=-0.012 Sum_probs=95.8
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecCCCC---e-EEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP---E-LLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~---~-~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
.+.+|+|.+.++.|.-.... +.|+...+.+.. . ++.. ...+..|++.+.+..| .+-...+.|.+-+++..
T Consensus 18 ~v~~l~~sp~g~~las~~~D---~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l-~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL-ASASFDATTCIWKKNQD 93 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECCC
T ss_pred cEEEEEECCCCCEEEEEcCC---CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE-EEEECCCcEEEEEccCC
Confidence 45678888776666544333 256655555221 1 1111 3456778888755544 45455567777766544
Q ss_pred ceEE--EEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEE---eecCCCCCeeEEeecCCCeEEEecCC
Q psy6572 642 FRKV--LINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVI---ISKNLSWPNALTISYETNELFWGDAH 716 (1416)
Q Consensus 642 ~~~v--Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vl---v~~~l~~P~gLaiD~~~~rLYWtD~~ 716 (1416)
.... .+........+|++.|...+|+-..... .|..-+++....... +.........|++.+....|..+ ..
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~ 170 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA-SY 170 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-ET
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC--eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-eC
Confidence 3222 2223345678999999866666554332 455555554333222 22233445678887654444443 33
Q ss_pred CCeEEEEeCCCCceEEE--EeccCCCCcccccceeEEEe-cCcEEEeecCCCeeE
Q psy6572 717 EDYIAVSDLNGENIKII--VSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIE 768 (1416)
Q Consensus 717 ~~~I~~~~ldG~~r~~v--~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~ 768 (1416)
.+.|...++.......+ +.+. .....+|++. .+.++.+-...+.|.
T Consensus 171 d~~i~~w~~~~~~~~~~~~~~~h------~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 171 DDTVKLYREEEDDWVCCATLEGH------ESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcEEEEEecCCCEEEEEEecCC------CCceEEEEECCCCCEEEEEeCCCeEE
Confidence 45565555544332222 1211 2334566664 344445544444443
No 389
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=87.87 E-value=0.046 Score=60.86 Aligned_cols=58 Identities=7% Similarity=0.006 Sum_probs=41.0
Q ss_pred cceecCCceEEeeCCCceecC-------------------------CCCCccccCCcCCCCCccc--eeeecCCeeeecC
Q psy6572 467 ECIDLKIGYKCACRKGYQVHP-------------------------EDKHLCVDTNECLDRPCSH--YCRNTLGSYSCSC 519 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p-------------------------~d~~tC~didEC~~~~Csq--~C~nt~gsy~C~C 519 (1416)
+|++...+|+|.|++||.-.. ..+..|..++||+..+|.. +|++...+|+|.|
T Consensus 45 ~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C 124 (267)
T 4fbr_A 45 KTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEG 124 (267)
T ss_dssp SEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSC
T ss_pred eecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeC
Confidence 566667777777777775220 0234566667777666665 7899999999999
Q ss_pred CCCcE
Q psy6572 520 APGYA 524 (1416)
Q Consensus 520 ~~Gy~ 524 (1416)
++||+
T Consensus 125 ~~Gf~ 129 (267)
T 4fbr_A 125 PIGFK 129 (267)
T ss_dssp CEEEE
T ss_pred CCCcc
Confidence 99998
No 390
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=87.75 E-value=57 Score=40.14 Aligned_cols=179 Identities=17% Similarity=0.233 Sum_probs=98.9
Q ss_pred eeeecCCCeEEEeeccC------CCccEEEEecC--CCCeEEee---------------------------cCCCceEE-
Q psy6572 572 LDFDWVDNCLYWSDVTM------HGSSIRRSCNN--SQPELLFP---------------------------ATSPDGLT- 615 (1416)
Q Consensus 572 l~~D~~~~~LYwtD~~~------~~~~I~r~~l~--s~~~~l~~---------------------------l~~p~gLA- 615 (1416)
.+|......|+..+... +...+..+.++ +..++++. +..|+-|.
T Consensus 158 ~aY~ldG~~LW~idlg~Ni~aGahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL~v 237 (620)
T 2zuy_A 158 DAYKLDGTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTV 237 (620)
T ss_dssp EEECTTSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEEEE
T ss_pred EEEECCCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEEEE
Confidence 35666655555555321 12356777777 66677664 12355554
Q ss_pred EEccCCcEEEeeCC---C--------------C--eEEEeecCCCceEEEEcCCCCCcce-eeecCCcceE--EEe-eCC
Q psy6572 616 VDWVGRNLYWCDKG---L--------------D--TIEVAKLDGRFRKVLINKGLQEPRG-IALNPAYGYM--YWT-DWG 672 (1416)
Q Consensus 616 vD~~~~~LYwtD~~---~--------------~--~I~v~~ldG~~~~vLi~~~l~~P~g-IavDp~~g~L--YWt-D~g 672 (1416)
+|-.++...++-.. + . .+.++.|||....+++..+.....- .|.|...+.| .|. +..
T Consensus 238 fdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~ 317 (620)
T 2zuy_A 238 FKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSN 317 (620)
T ss_dssp EETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETT
T ss_pred EcCCCcceeeecccCCCcCccccccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCC
Confidence 45556666554211 1 1 4678889999766666555444333 3566666532 443 221
Q ss_pred C----------CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEe-cCC-CCeEEEEeCCC--CceEEEEeccC
Q psy6572 673 Q----------NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWG-DAH-EDYIAVSDLNG--ENIKIIVSRRM 738 (1416)
Q Consensus 673 ~----------~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWt-D~~-~~~I~~~~ldG--~~r~~v~~~~~ 738 (1416)
. +..+..+++||-.+..|+.. +.+||. ++.+.|. ... .+.+...+++. ...+++.-...
T Consensus 318 ~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G------s~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~ 390 (620)
T 2zuy_A 318 QPGHEAYAGQGNHSLSVADVDGDGKDEIIYG------AMAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHED 390 (620)
T ss_dssp STTCGGGTTCCCSSCEEECCSSSSSCEEEET------TEEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCC
T ss_pred CCcccccccccCcCceEEecCCCCceeEEEe------eeEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecC
Confidence 1 13688999999998888763 357885 5555555 332 33566666654 34444433210
Q ss_pred CCCcccccceeEEEe---cCcEEEeec
Q psy6572 739 DPTINLHHVFALAVF---EDHLFWTDW 762 (1416)
Q Consensus 739 ~p~~~l~~P~~lav~---~d~LYwtD~ 762 (1416)
-..|.+++++ .+.|+|.-.
T Consensus 391 -----~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 391 -----ATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp -----TTSSCSEEEEETTTCCEEEEEC
T ss_pred -----CCCCCceEEEECCCCcEEEEec
Confidence 1246666654 466777543
No 391
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.20 E-value=31 Score=40.16 Aligned_cols=159 Identities=14% Similarity=0.059 Sum_probs=86.3
Q ss_pred ceeeeeecC-CCeEEEeeccCCCccEEEEecC-CCCeEEee-c-------------CCCceEEEEccC-CcEEEeeCCCC
Q psy6572 569 AVGLDFDWV-DNCLYWSDVTMHGSSIRRSCNN-SQPELLFP-A-------------TSPDGLTVDWVG-RNLYWCDKGLD 631 (1416)
Q Consensus 569 ~~~l~~D~~-~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l-------------~~p~gLAvD~~~-~~LYwtD~~~~ 631 (1416)
+.+|.+|+. .+.||+.... ..|++..-. ...+.+.. + ..+..|++++.. +.||+.. ..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~---ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~ 253 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSS---GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HC 253 (394)
T ss_dssp EEEEEECTTCTTCEEEEEET---BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TT
T ss_pred eeEEEECCCCCCEEEEEECC---CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CC
Confidence 457888874 4677776433 246665443 23333321 1 125678999864 5666654 24
Q ss_pred eEEEeecCCCceEEEEcCCCC-----CcceeeecCC-cceEEEeeC-----------CCCceEEEEecCCCCCEEEeecC
Q psy6572 632 TIEVAKLDGRFRKVLINKGLQ-----EPRGIALNPA-YGYMYWTDW-----------GQNAHIGKAKMDGSNPKVIISKN 694 (1416)
Q Consensus 632 ~I~v~~ldG~~~~vLi~~~l~-----~P~gIavDp~-~g~LYWtD~-----------g~~~~I~ra~mDGs~r~vlv~~~ 694 (1416)
.|++..-.|..-+.+. ..+. ....|+++|. .+.||..-. +....|++..-.|..-+.+. ..
T Consensus 254 gl~~s~D~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~-~g 331 (394)
T 3b7f_A 254 GIYRMDRREGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD-RG 331 (394)
T ss_dssp EEEEEETTTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC-BT
T ss_pred eEEEeCCCCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC-CC
Confidence 5777765565433332 2122 2246889885 466777521 11236776544444444433 33
Q ss_pred CCC--------CeeEEeecCC-CeEEEecCCCCeEEEEeCCCCceEEEEe
Q psy6572 695 LSW--------PNALTISYET-NELFWGDAHEDYIAVSDLNGENIKIIVS 735 (1416)
Q Consensus 695 l~~--------P~gLaiD~~~-~rLYWtD~~~~~I~~~~ldG~~r~~v~~ 735 (1416)
|.. ..+|++|+.+ ++||+.- ..+.|++..-.|..-+.+..
T Consensus 332 lp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~~ 380 (394)
T 3b7f_A 332 LPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASADEGEHWQCIAS 380 (394)
T ss_dssp SCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEESSTTSBCEEEEC
T ss_pred CCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEECCCCCCceEccc
Confidence 332 1368888755 4677653 34567777666666555543
No 392
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=87.19 E-value=0.3 Score=39.35 Aligned_cols=36 Identities=25% Similarity=0.652 Sum_probs=26.9
Q ss_pred cCCcCCC---CCccc-eeeecC--CeeeecCCCCcEEecCCCceEe
Q psy6572 495 DTNECLD---RPCSH-YCRNTL--GSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 495 didEC~~---~~Csq-~C~nt~--gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
++++|.. .+|.+ .|+... ++|+|.|++||+ |..|..
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 4667764 77876 788755 699999999996 666643
No 393
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.09 E-value=60 Score=41.46 Aligned_cols=191 Identities=7% Similarity=-0.047 Sum_probs=101.6
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecCC-CCeEEe---e--cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNS-QPELLF---P--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR 641 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~---~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~ 641 (1416)
.+.+|..|. .+.||+.... ..|.++...+ ..+.+. . ...+.+|+.|. .++|++... .+.|.+.+....
T Consensus 364 ~v~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 364 VVSSVCDDG-QGKLWIGTDG---GGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLWFGTY-LGNISYYNTRLK 437 (781)
T ss_dssp CEEEEEECT-TSCEEEEEBS---SCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEEEEET-TEEEEEECSSSC
T ss_pred ceEEEEEcC-CCCEEEEeCC---CcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEEEEec-cCCEEEEcCCCC
Confidence 356677765 3556554323 2477766552 111111 1 23456777774 566666533 346777766533
Q ss_pred ceEEEEc--CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecC-----CCCCeeEEeecCCCeEEEec
Q psy6572 642 FRKVLIN--KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKN-----LSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 642 ~~~vLi~--~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~-----l~~P~gLaiD~~~~rLYWtD 714 (1416)
..+.+.. ......++|+.|+. |.||+... ..|.+.+......+.+.... ...+.+|++|. .++|+++-
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~-g~lwigt~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt 512 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKN-KKIWIGTH---AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGT 512 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTT-SEEEEEET---TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEE
T ss_pred cEEEeccCCCCCCeEEEEEECCC-CCEEEEEC---CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEEEE
Confidence 2222221 12345778888875 77777653 36888877654433333221 24567888885 67777765
Q ss_pred CCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCee-EEecccCC
Q psy6572 715 AHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSI-ERCDKYTG 775 (1416)
Q Consensus 715 ~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I-~~~nk~tG 775 (1416)
.. +.|.+++.++...+.+.... ........+|... .+.|+++.. ..| .+.+..++
T Consensus 513 ~~-~Gl~~~~~~~~~~~~~~~~~---~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~ 569 (781)
T 3v9f_A 513 FG-GGVGIYTPDMQLVRKFNQYE---GFCSNTINQIYRSSKGQMWLATG--EGLVCFPSARNF 569 (781)
T ss_dssp SS-SCEEEECTTCCEEEEECTTT---TCSCSCEEEEEECTTSCEEEEET--TEEEEESCTTTC
T ss_pred cC-CCEEEEeCCCCeEEEccCCC---CCCCCeeEEEEECCCCCEEEEEC--CCceEEECCCCC
Confidence 42 45778877665444443211 1112234566664 455655543 344 66665444
No 394
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=86.63 E-value=64 Score=39.56 Aligned_cols=179 Identities=16% Similarity=0.238 Sum_probs=100.4
Q ss_pred eeeecCCCeEEEeeccCC------CccEEEEecC--CCCeEEee---------------------------cCCCceEE-
Q psy6572 572 LDFDWVDNCLYWSDVTMH------GSSIRRSCNN--SQPELLFP---------------------------ATSPDGLT- 615 (1416)
Q Consensus 572 l~~D~~~~~LYwtD~~~~------~~~I~r~~l~--s~~~~l~~---------------------------l~~p~gLA- 615 (1416)
.+|+.....|+..+...+ ...+.++.++ +..++++. +..|+-|.
T Consensus 154 ~aY~ldG~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~v 233 (591)
T 2zux_A 154 DAYKLDGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTV 233 (591)
T ss_dssp EEECTTSCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEE
T ss_pred EEEECCCCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEE
Confidence 356666555554554321 1246677777 56666654 22344454
Q ss_pred EEccCCcEEEeeCC---CC----------------eEEEeecCCCceEEEEcCCCCC-cceeeecCCcceE--EEe-eCC
Q psy6572 616 VDWVGRNLYWCDKG---LD----------------TIEVAKLDGRFRKVLINKGLQE-PRGIALNPAYGYM--YWT-DWG 672 (1416)
Q Consensus 616 vD~~~~~LYwtD~~---~~----------------~I~v~~ldG~~~~vLi~~~l~~-P~gIavDp~~g~L--YWt-D~g 672 (1416)
+|-.++..+++-.. ++ .+.++.|||....+++..+... -.-.|.|...+.| .|+ |..
T Consensus 234 fdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~ 313 (591)
T 2zux_A 234 FQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSS 313 (591)
T ss_dssp EETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETT
T ss_pred EeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCC
Confidence 46566666665221 11 4678889998766666544332 2345677666654 553 221
Q ss_pred C----------CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecC--CCCeEEEEeCCCC--ceEEEEeccC
Q psy6572 673 Q----------NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDA--HEDYIAVSDLNGE--NIKIIVSRRM 738 (1416)
Q Consensus 673 ~----------~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~--~~~~I~~~~ldG~--~r~~v~~~~~ 738 (1416)
. +..+..+++||-.+..|+.. +.+||. ++.+.|+-. +.+.+...+++.. ..+++.-...
T Consensus 314 ~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G------s~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~ 386 (591)
T 2zux_A 314 KSGNEAFAGQGNHNLSIADVDGDGKDEIIFG------SMAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHED 386 (591)
T ss_dssp STTCGGGSSCCCSCCEEECCSSSSSCEEEET------TEEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCC
T ss_pred CCCcccccccCCCCCeeEeCCCCCCceEEEe------eeEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecC
Confidence 1 13688999999998888763 357885 555555543 2346677777654 3344443220
Q ss_pred CCCcccccceeEEEe---cCcEEEeec
Q psy6572 739 DPTINLHHVFALAVF---EDHLFWTDW 762 (1416)
Q Consensus 739 ~p~~~l~~P~~lav~---~d~LYwtD~ 762 (1416)
-..|.+.+++ .+.|+|.-.
T Consensus 387 -----~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 387 -----KNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp -----TTSSCSEEEEETTTCCEEEEEC
T ss_pred -----CCCCCccEEEECCCCcEEEEcC
Confidence 1245566554 456666543
No 395
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.24 E-value=48 Score=37.21 Aligned_cols=153 Identities=5% Similarity=-0.039 Sum_probs=87.1
Q ss_pred ccceeeeeec--CCCeEEEeeccCCCccEEEEecCC-CCeEEee---cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDW--VDNCLYWSDVTMHGSSIRRSCNNS-QPELLFP---ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~--~~~~LYwtD~~~~~~~I~r~~l~s-~~~~l~~---l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+..|++.+ .++.|...... +.|+...+.+ ....+.. ...+..|++.+. +.++.+-...+.|.+.++..
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~d---g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNR---GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETT---CCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEECTTSCEEEEESSC
T ss_pred CCEEEEEcCCCCCCCEEEEEeCC---CcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCC
Confidence 4577888888 55555444433 3788777773 3222222 335778898874 55556666778899998875
Q ss_pred CceE--EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeec--CCCCC---eeEEeecCCCeEEEe
Q psy6572 641 RFRK--VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISK--NLSWP---NALTISYETNELFWG 713 (1416)
Q Consensus 641 ~~~~--vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~l~~P---~gLaiD~~~~rLYWt 713 (1416)
.... .+..........|++.|...+|..+.. . .|..-++........+.. .-..+ ..|++++....|..+
T Consensus 202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVECD--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp TTSCCEECCCCTTSCEEEEEECTTSSEEEEEES--S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 5432 332213466789999998777766652 2 566666654432111110 00012 348888766666654
Q ss_pred cCCCCeEEEEeCC
Q psy6572 714 DAHEDYIAVSDLN 726 (1416)
Q Consensus 714 D~~~~~I~~~~ld 726 (1416)
....+.|...+++
T Consensus 279 s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 279 SNESNSLTIYKFD 291 (343)
T ss_dssp ETTTTEEEEEEEC
T ss_pred cCCCCcEEEEEEc
Confidence 4334556666553
No 396
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.10 E-value=48 Score=37.11 Aligned_cols=155 Identities=9% Similarity=0.020 Sum_probs=77.6
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecC-C-----CCeEEee----cCCCceEEEEccCCcEEEeeCCCCeEEEe
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-S-----QPELLFP----ATSPDGLTVDWVGRNLYWCDKGLDTIEVA 636 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s-----~~~~l~~----l~~p~gLAvD~~~~~LYwtD~~~~~I~v~ 636 (1416)
..+.+|+|.+..+.|.-.... +.|+...+. . ..+.+.. ...+.+|++.+.+. ++.+-...++|.+.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iw 134 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIW 134 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEE
Confidence 456789998877666554433 356666653 1 1122222 44567888887544 44555566788888
Q ss_pred ecC-C-CceE--EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEeecCC-CeEE
Q psy6572 637 KLD-G-RFRK--VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTISYET-NELF 711 (1416)
Q Consensus 637 ~ld-G-~~~~--vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~-~rLY 711 (1416)
++. + ...+ ..+.........|++.|...+|.-......-+|+............+.........+++.+.. +.++
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 873 2 2211 122233455788999998666655544333344433211001111222233345677776542 2333
Q ss_pred EecCCCCeEEEEeC
Q psy6572 712 WGDAHEDYIAVSDL 725 (1416)
Q Consensus 712 WtD~~~~~I~~~~l 725 (1416)
.+-...+.|...++
T Consensus 215 ~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 215 CSGSDDSTVRVWKY 228 (330)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEEeCCCeEEEEEe
Confidence 33333344444443
No 397
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.63 E-value=83 Score=39.71 Aligned_cols=16 Identities=25% Similarity=0.605 Sum_probs=13.7
Q ss_pred ceeeecCCcceEEEee
Q psy6572 655 RGIALNPAYGYMYWTD 670 (1416)
Q Consensus 655 ~gIavDp~~g~LYWtD 670 (1416)
.++|+||.+++||+..
T Consensus 396 ~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPA 411 (677)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CCceEcCCCCEEEEeC
Confidence 4789999999999863
No 398
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.69 E-value=60 Score=36.95 Aligned_cols=102 Identities=12% Similarity=0.202 Sum_probs=60.7
Q ss_pred cceEEEeeCCCCceEEEEecC-CCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCC
Q psy6572 663 YGYMYWTDWGQNAHIGKAKMD-GSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDP 740 (1416)
Q Consensus 663 ~g~LYWtD~g~~~~I~ra~mD-Gs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p 740 (1416)
.+.||+.... ..|...++. |. ++-...+..+.+++++ .++||++.. .+.|..++. +|..+-. ....
T Consensus 239 ~~~v~~~~~~--g~l~~~d~~tG~---~~w~~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~-~~~~--- 306 (376)
T 3q7m_A 239 NGVVFALAYN--GNLTALDLRSGQ---IMWKRELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWT-QSDL--- 306 (376)
T ss_dssp TTEEEEECTT--SCEEEEETTTCC---EEEEECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEE-ECTT---
T ss_pred CCEEEEEecC--cEEEEEECCCCc---EEeeccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEe-eccc---
Confidence 4778887532 356666653 33 2233334456677775 789999874 457888886 4443222 2110
Q ss_pred CcccccceeEEEecCcEEEeecCCCeeEEecccCCCceE
Q psy6572 741 TINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKNCT 779 (1416)
Q Consensus 741 ~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~ 779 (1416)
.-....++.+.+++||+... .+.|+.++..+|+.+.
T Consensus 307 --~~~~~~~~~~~~~~l~v~~~-~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 307 --LHRLLTSPVLYNGNLVVGDS-EGYLHWINVEDGRFVA 342 (376)
T ss_dssp --TTSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred --CCCcccCCEEECCEEEEEeC-CCeEEEEECCCCcEEE
Confidence 01223345567889988875 4678888877776443
No 399
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=84.50 E-value=48 Score=42.77 Aligned_cols=166 Identities=10% Similarity=0.038 Sum_probs=89.0
Q ss_pred ccceeeeeecCC-CeEEEeeccCC---CccEEEEecC-CCCeEEee-cC---------CCceEEEEccCCcEEEeeCCCC
Q psy6572 567 TNAVGLDFDWVD-NCLYWSDVTMH---GSSIRRSCNN-SQPELLFP-AT---------SPDGLTVDWVGRNLYWCDKGLD 631 (1416)
Q Consensus 567 ~~~~~l~~D~~~-~~LYwtD~~~~---~~~I~r~~l~-s~~~~l~~-l~---------~p~gLAvD~~~~~LYwtD~~~~ 631 (1416)
..+.+|++|+.. +.||+.-.... ...|++..-. ...+.+.. +. .+..|+|++....+.|+-....
T Consensus 64 ~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 64 MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp CSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred CceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 357788999854 56666532210 0356665433 22333321 11 2357999987654444443345
Q ss_pred eEEEeecCCCceEEEEcCC-----CCCcceeeecCCcc-eEEEeeCCCCceEEEEecCCCCCEEEeec--CC--------
Q psy6572 632 TIEVAKLDGRFRKVLINKG-----LQEPRGIALNPAYG-YMYWTDWGQNAHIGKAKMDGSNPKVIISK--NL-------- 695 (1416)
Q Consensus 632 ~I~v~~ldG~~~~vLi~~~-----l~~P~gIavDp~~g-~LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~l-------- 695 (1416)
.|++..=.|..-+.+.... ......|+++|..+ .||...+.. ..|++..=.|..=+.+... ..
T Consensus 144 gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~ 222 (789)
T 1sqj_A 144 GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAF 222 (789)
T ss_dssp CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-TCEEEESSTTSSCEECTTCCCSCCHHHHHTS
T ss_pred CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-CeEEEEcCCCcCcccCCCCcCcccccccccc
Confidence 6777665565544332110 12235688898754 777776432 3577654334443332210 01
Q ss_pred -------CCCeeEEeecCCCeEEEec--------CCCCeEEEEeCCCCceEEE
Q psy6572 696 -------SWPNALTISYETNELFWGD--------AHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 696 -------~~P~gLaiD~~~~rLYWtD--------~~~~~I~~~~ldG~~r~~v 733 (1416)
..|..|+|++..++||.+- ...+.|++..-.|..-+.+
T Consensus 223 ~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~ 275 (789)
T 1sqj_A 223 PDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDI 275 (789)
T ss_dssp TTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEEC
T ss_pred CcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEEC
Confidence 1237888987778888872 2456777777666554443
No 400
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.36 E-value=27 Score=44.08 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=22.1
Q ss_pred eEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 749 ALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 749 ~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
.++..++.||+.+ ..+.|+.++..+|+..-.+
T Consensus 464 ~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 464 TLSTAGNLVFQGT-AAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred eeEeCCCEEEEEC-CcccchhhhhhcChhheEe
Confidence 4556678888873 5677888888777755443
No 401
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=84.28 E-value=59 Score=36.52 Aligned_cols=154 Identities=12% Similarity=0.006 Sum_probs=79.4
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-eEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-RKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
...+..|++.+.+ .+..+-...+.|.+-++.... ...+. .......+|++.|...+|+-+... ..|..-++.+..
T Consensus 76 ~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d--~~i~~wd~~~~~ 151 (343)
T 2xzm_R 76 NHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAE--REIKLWNILGEC 151 (343)
T ss_dssp SSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETT--SCEEEEESSSCE
T ss_pred CCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCC--CEEEEEeccCCc
Confidence 3456778887644 444566667889888876443 33443 344567899999987777665432 345555555432
Q ss_pred CEEEee--cCCCCCeeEEeecCC---------CeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-c
Q psy6572 687 PKVIIS--KNLSWPNALTISYET---------NELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-E 754 (1416)
Q Consensus 687 r~vlv~--~~l~~P~gLaiD~~~---------~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~ 754 (1416)
...+.. ....+...+++.+.. +.++.+-...+.|...+..+..+..+. .. -....+|++. .
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h------~~~v~~~~~s~~ 224 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AH------ESNVNHLSISPN 224 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CC------SSCEEEEEECTT
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-Cc------cccceEEEECCC
Confidence 222111 112233455554432 133333334456666664443322222 11 2234556663 3
Q ss_pred CcEEEeecCCCeeEEecc
Q psy6572 755 DHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 755 d~LYwtD~~~~~I~~~nk 772 (1416)
+.++.+-...+.|..-+.
T Consensus 225 g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp SSEEEEEETTCEEEEEES
T ss_pred CCEEEEEcCCCeEEEEEC
Confidence 455555555555554443
No 402
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=84.26 E-value=0.61 Score=37.15 Aligned_cols=27 Identities=33% Similarity=0.872 Sum_probs=20.9
Q ss_pred Cccc--eee--ecCCeeeecCCCCcEEecCCCceE
Q psy6572 503 PCSH--YCR--NTLGSYSCSCAPGYALLSDKHGCK 533 (1416)
Q Consensus 503 ~Csq--~C~--nt~gsy~C~C~~Gy~L~~dg~sC~ 533 (1416)
+|.+ +|+ +..++|+|.|++||+ |+.|.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 5654 676 677899999999997 66674
No 403
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=83.84 E-value=0.54 Score=39.37 Aligned_cols=30 Identities=23% Similarity=0.613 Sum_probs=20.8
Q ss_pred ccccccCCCCCCcccc--cc-----eecCCceEEeeCCCce
Q psy6572 451 FVNECNVSHGGQLCAH--EC-----IDLKIGYKCACRKGYQ 484 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C-----~nt~~gy~C~C~~Gy~ 484 (1416)
+++||...+ |.+ .| ++...+|+|.|++||.
T Consensus 7 ~~~eC~s~p----C~NgGtC~~~~~~d~~~~y~C~C~~g~~ 43 (55)
T 3u7u_G 7 KCAEKEKTF----CVNGGECFMVKDLSNPSRYLCKCPNEFT 43 (55)
T ss_dssp ECCSTTTTT----SCTTCEEEEECCC--CCCEEEEECTTEE
T ss_pred cCCCCcCCC----CCCCCCcCCCCccCCCCCEeEeCCCCCc
Confidence 467776543 554 67 4567899999999995
No 404
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=83.71 E-value=18 Score=42.96 Aligned_cols=145 Identities=10% Similarity=-0.043 Sum_probs=82.0
Q ss_pred CCceEEEEccCCcEEE---eeCCCCeEEEeecCCC------ce---EEEE--cCCCCCcceeeecCCcceEEEeeCCCCc
Q psy6572 610 SPDGLTVDWVGRNLYW---CDKGLDTIEVAKLDGR------FR---KVLI--NKGLQEPRGIALNPAYGYMYWTDWGQNA 675 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYw---tD~~~~~I~v~~ldG~------~~---~vLi--~~~l~~P~gIavDp~~g~LYWtD~g~~~ 675 (1416)
.+..|++.+.+..|++ +-...+.|.+.++... .+ ..+. ......+++|+..|..+.++.+-... .
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D-g 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD-G 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT-S
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC-C
Confidence 4778899888888887 5555678888876432 11 1111 11235678999999866666653222 3
Q ss_pred eEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccc---cceeEEE
Q psy6572 676 HIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLH---HVFALAV 752 (1416)
Q Consensus 676 ~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~---~P~~lav 752 (1416)
.|...++............-..+..|++.+...+|+.+. ..+.|...++.|...+.+.... ..... ...+|+.
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVIPCPP---FYESDHPVRVLDVLW 248 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEECCCT---TCCTTSCEEEEEEEE
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccccCCc---ccCCCCceeEEEEEE
Confidence 565556554322111112234568899987666666554 5678888888865544442211 00011 3456666
Q ss_pred ecCcEEE
Q psy6572 753 FEDHLFW 759 (1416)
Q Consensus 753 ~~d~LYw 759 (1416)
..+.+|.
T Consensus 249 ~~~~~~l 255 (434)
T 2oit_A 249 IGTYVFA 255 (434)
T ss_dssp EETTEEE
T ss_pred ecCceEE
Confidence 6665555
No 405
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=83.31 E-value=58 Score=35.73 Aligned_cols=177 Identities=8% Similarity=0.011 Sum_probs=87.3
Q ss_pred EEEEEEecCCc--c--eEEecccccceeeeeecC-CCeEEEeeccCCCccEEEEecC-CCCe---EEee-cCCCceEEEE
Q psy6572 548 YYIREVTQAGV--M--TIRIHNQTNAVGLDFDWV-DNCLYWSDVTMHGSSIRRSCNN-SQPE---LLFP-ATSPDGLTVD 617 (1416)
Q Consensus 548 ~~I~~i~l~g~--~--~~~~~~l~~~~~l~~D~~-~~~LYwtD~~~~~~~I~r~~l~-s~~~---~l~~-l~~p~gLAvD 617 (1416)
..|+..++.+. . ..+......+.+|+|.+. .+.++.+-... +.|+...+. .... ++.. ...+..|++.
T Consensus 31 ~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D--~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~ 108 (297)
T 2pm7_B 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--GKVMIWKEENGRWSQIAVHAVHSASVNSVQWA 108 (297)
T ss_dssp SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--TEEEEEEBSSSCBCCCEEECCCSSCEEEEEEC
T ss_pred CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC--CEEEEEEcCCCceEEEEEeecCCCceeEEEeC
Confidence 34555555432 1 222223345667887543 24444443332 367777776 3212 2221 3456677777
Q ss_pred ccC-CcEEEeeCCCCeEEEeecCCCc--eEEEEcCCCCCcceeeecCCc------------ceEEEeeCCCCceEEEEec
Q psy6572 618 WVG-RNLYWCDKGLDTIEVAKLDGRF--RKVLINKGLQEPRGIALNPAY------------GYMYWTDWGQNAHIGKAKM 682 (1416)
Q Consensus 618 ~~~-~~LYwtD~~~~~I~v~~ldG~~--~~vLi~~~l~~P~gIavDp~~------------g~LYWtD~g~~~~I~ra~m 682 (1416)
+.. +.++.+-...+.|.+.++.... ...++.........+++.|.. +.++++-.. ...|..-++
T Consensus 109 p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lwd~ 187 (297)
T 2pm7_B 109 PHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKY 187 (297)
T ss_dssp CGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET-TSCEEEEEE
T ss_pred cCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC-CCcEEEEEE
Confidence 652 5566666667888888876432 122232333456677777752 334444321 223444444
Q ss_pred CCCCCE-EE---eecCCCCCeeEEeecCC--CeEEEecCCCCeEEEEeCCC
Q psy6572 683 DGSNPK-VI---ISKNLSWPNALTISYET--NELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 683 DGs~r~-vl---v~~~l~~P~gLaiD~~~--~rLYWtD~~~~~I~~~~ldG 727 (1416)
...... .+ +...-.+.++|++.+.. +.++.+-...+.|...+++.
T Consensus 188 ~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 433221 11 22223445778887643 34444444445565555543
No 406
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=82.88 E-value=30 Score=42.93 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=20.4
Q ss_pred EEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 750 LAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 750 lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
|+..++.||... ..+.|+.++..+|+.+-.+
T Consensus 493 ~~tagglvf~g~-~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 493 LATAGNLVFTGT-GDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred eEeCCCEEEEEC-CCCcEEEEECCCCCEEEEe
Confidence 455677788764 3567888887777754443
No 407
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.57 E-value=5.1 Score=49.86 Aligned_cols=62 Identities=15% Similarity=0.235 Sum_probs=43.6
Q ss_pred cCCCceEEEEccCCcEEEeeCC---------------------CCeEEEeecCCCc-------eEEEE-c----------
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKG---------------------LDTIEVAKLDGRF-------RKVLI-N---------- 648 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~---------------------~~~I~v~~ldG~~-------~~vLi-~---------- 648 (1416)
+..|++|++++..+.||++-.. .++|++...++.. ..+++ .
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 6789999999999999998542 2578888765321 11222 1
Q ss_pred ----------CCCCCcceeeecCCcceEEEee
Q psy6572 649 ----------KGLQEPRGIALNPAYGYMYWTD 670 (1416)
Q Consensus 649 ----------~~l~~P~gIavDp~~g~LYWtD 670 (1416)
..+..|-.|++||. |.||+..
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~e 493 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKA-GRLWILT 493 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTT-CCEEEEE
T ss_pred cccccccCCCCCccCCcceEECCC-CCEEEEe
Confidence 13678999999997 6677654
No 408
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=82.54 E-value=0.82 Score=37.81 Aligned_cols=27 Identities=30% Similarity=0.826 Sum_probs=21.0
Q ss_pred ccc--cce--ecCCceEEeeCCCceecCCCCCcccc
Q psy6572 464 CAH--ECI--DLKIGYKCACRKGYQVHPEDKHLCVD 495 (1416)
Q Consensus 464 Cs~--~C~--nt~~gy~C~C~~Gy~L~p~d~~tC~d 495 (1416)
|.+ .|+ +..++|+|.|++||. +..|+.
T Consensus 14 C~ngg~C~~~~~~~~~~C~C~~G~~-----G~~Ce~ 44 (53)
T 1egf_A 14 CLNGGVCMHIESLDSYTCNCVIGYS-----GDRCQT 44 (53)
T ss_dssp SCSSCEEEEESSSSCEEEECCTTCC-----SSSSCC
T ss_pred CCCCcEEEeeCCCCCEEEECCCCCc-----CCcCCc
Confidence 664 688 788999999999994 445653
No 409
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=82.49 E-value=1e+02 Score=37.96 Aligned_cols=16 Identities=13% Similarity=0.000 Sum_probs=13.7
Q ss_pred ceeeecCCcceEEEee
Q psy6572 655 RGIALNPAYGYMYWTD 670 (1416)
Q Consensus 655 ~gIavDp~~g~LYWtD 670 (1416)
.++|+||.+++||+..
T Consensus 389 ~~~a~dp~~g~~yv~~ 404 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGL 404 (571)
T ss_dssp CBCEEETTTTEEEEEE
T ss_pred CCceECCCCCEEEEEc
Confidence 4689999999999975
No 410
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=81.96 E-value=0.6 Score=47.90 Aligned_cols=29 Identities=24% Similarity=0.579 Sum_probs=23.4
Q ss_pred cceecCCceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 467 ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
.|+++.++|.|.|++||. |..|+.++||+
T Consensus 132 ~C~~~~~~~~c~C~~g~~-----G~~Ce~~~~c~ 160 (162)
T 1g1s_A 132 ECLETIGNYTCSCYPGFY-----GPECEYVRDDD 160 (162)
T ss_dssp EEEECSSSEEEEECTTEE-----STTSCEECC--
T ss_pred EEecCCCCceEeCCCCCc-----CcccccCcccC
Confidence 689999999999999996 45799888885
No 411
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.82 E-value=4.3 Score=50.53 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=69.8
Q ss_pred ccccceeeeeecCCCeEEEeeccCC-------------------CccEEEEecC-CC-------CeEEe-----------
Q psy6572 565 NQTNAVGLDFDWVDNCLYWSDVTMH-------------------GSSIRRSCNN-SQ-------PELLF----------- 606 (1416)
Q Consensus 565 ~l~~~~~l~~D~~~~~LYwtD~~~~-------------------~~~I~r~~l~-s~-------~~~l~----------- 606 (1416)
.+..+.+++|++.++.||++-.... .+.|+|+... .. .++++
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 3456889999999999999865421 1468887654 11 11111
Q ss_pred -----------e-cCCCceEEEEccCCcEEE-eeCC-----------CCeEEEeecC-CCceEEEEcCCCCCcceeeecC
Q psy6572 607 -----------P-ATSPDGLTVDWVGRNLYW-CDKG-----------LDTIEVAKLD-GRFRKVLINKGLQEPRGIALNP 661 (1416)
Q Consensus 607 -----------~-l~~p~gLAvD~~~~~LYw-tD~~-----------~~~I~v~~ld-G~~~~vLi~~~l~~P~gIavDp 661 (1416)
. +..|..|+||+.++ ||+ +|.. .+.+.+.... |..++.+....-....|+++.|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 0 56799999998655 666 4532 2456666654 5556666655556788999999
Q ss_pred CcceEEEee
Q psy6572 662 AYGYMYWTD 670 (1416)
Q Consensus 662 ~~g~LYWtD 670 (1416)
..+.||+.-
T Consensus 541 Dg~tlfvni 549 (592)
T 3zwu_A 541 DQKTLFVGI 549 (592)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 888888864
No 412
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=80.73 E-value=1.6 Score=41.00 Aligned_cols=66 Identities=20% Similarity=0.393 Sum_probs=49.5
Q ss_pred ccee-cCCceEEeeCCCceecCCCCCccccCCc-CC--CCCccc--eeeecC-CeeeecCCCCcE-EecCCCceEec
Q psy6572 467 ECID-LKIGYKCACRKGYQVHPEDKHLCVDTNE-CL--DRPCSH--YCRNTL-GSYSCSCAPGYA-LLSDKHGCKAT 535 (1416)
Q Consensus 467 ~C~n-t~~gy~C~C~~Gy~L~p~d~~tC~didE-C~--~~~Csq--~C~nt~-gsy~C~C~~Gy~-L~~dg~sC~a~ 535 (1416)
.|.. +++..+|.|..||+. ++..|+.++. |+ ++.|+- .|..+. ..-.|.|.+||. ..-+|.-|...
T Consensus 23 ~C~r~~~G~e~CrCl~gY~~---dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~s 96 (105)
T 1n1i_A 23 ACYRYLDGTEEWRCLLGFKE---VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCSSS 96 (105)
T ss_dssp EEEECTTSCEEEEECTTEEE---CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEECCC
T ss_pred CeEECCCCCEeEEEECCeec---cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEECCC
Confidence 4566 778889999999984 6788999999 76 688875 788875 688999999973 22345555443
No 413
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=80.58 E-value=45 Score=37.09 Aligned_cols=115 Identities=9% Similarity=-0.023 Sum_probs=62.2
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee----cCCCceEEEEc-cCCcEEEeeCCCCeEEEeecCC
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP----ATSPDGLTVDW-VGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~----l~~p~gLAvD~-~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
..+..|+|++.++.|.-.... +.|+...+.+. ...+.. ...+..|++.+ ..++++.+-...++|.+-++..
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D---~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSD---RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETT---TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred CeEEEeeEcCCCCEEEEEeCC---CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 345677887766655544332 25666666522 222222 34456666643 2356666767778888888764
Q ss_pred C-ceEE-EEcCCCCCcceeeecCCc-ceEEEeeCCCCceEEEEecCCC
Q psy6572 641 R-FRKV-LINKGLQEPRGIALNPAY-GYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 641 ~-~~~v-Li~~~l~~P~gIavDp~~-g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
. ...+ .+.......++|++.|.. +.++.+-. ....|...++.+.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs-~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS-SDGAISLLTYTGE 137 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC-SSSCEEEEEECSS
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEc-CCCCEEEEecCCC
Confidence 3 2222 222334567899999873 44444432 2234555555443
No 414
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=78.99 E-value=75 Score=41.58 Aligned_cols=188 Identities=11% Similarity=-0.039 Sum_probs=101.8
Q ss_pred ceEecCCCCCeEEEEe-cEEEEEEecCCcc-eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCC--eEEe
Q psy6572 531 GCKATSDVPPNLLFTN-KYYIREVTQAGVM-TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQP--ELLF 606 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~-~~~I~~i~l~g~~-~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~--~~l~ 606 (1416)
++.+.++...+|..+. ...|+..+..+.. .........+.+|+|.+ ++.|+-.... +.|+..++.+.. ..+.
T Consensus 21 ~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D---~~v~lWd~~~~~~~~~~~ 96 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAK---DTVYVLSLYSQKVLTTVF 96 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETT---CEEEEEETTTCSEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECc---CeEEEEECCCCcEEEEEc
Confidence 3444444344444433 3456666655443 22223344578899988 5545444333 378888777322 1221
Q ss_pred ecCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEE-E----------cCCCCCcceeeecCCcceEEEeeCCCCc
Q psy6572 607 PATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVL-I----------NKGLQEPRGIALNPAYGYMYWTDWGQNA 675 (1416)
Q Consensus 607 ~l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vL-i----------~~~l~~P~gIavDp~~g~LYWtD~g~~~ 675 (1416)
.-..+..|++++.+..|+... ..+.|.+.++.+.....+ + ........+|+++|..+.++.+-... .
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d-g 174 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY-V 174 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS-C
T ss_pred CCCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC-C
Confidence 134567888888777776554 467888888876543211 1 11234578899999755444443222 3
Q ss_pred eEEEEecCCCCCEEEeecC------------------CCCCeeEEeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 676 HIGKAKMDGSNPKVIISKN------------------LSWPNALTISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 676 ~I~ra~mDGs~r~vlv~~~------------------l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
.| .-++........+... ....+.|++.+. ++++.+-...+.|...++.
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd-g~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN-SLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT-SSEEEEEETTCCEEEEETT
T ss_pred cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC-CCEEEEEECCCeEEEEECC
Confidence 55 5555543222222111 123567888754 5555554455677777764
No 415
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.73 E-value=1.6e+02 Score=37.44 Aligned_cols=193 Identities=7% Similarity=0.017 Sum_probs=98.9
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--------cCCCceEEEEccCCcEEEeeCCCCeEEEeec
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--------ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--------l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~l 638 (1416)
.+.+|..|.. +.|++.... +.|.++... ...+.+.. ...+.+|+.|. .++|++... .+.|.+.+.
T Consensus 311 ~i~~i~~D~~-g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~lWiGt~-~~Gl~~~~~ 384 (795)
T 4a2l_A 311 SVRSIFMDSQ-GGMWLGTYF---GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKNLWIGTN-DGGLNLYNP 384 (795)
T ss_dssp CEEEEEECTT-SCEEEEESS---SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSCEEEEES-SSCEEEECT
T ss_pred cEEEEEEeCC-cCEEEEECC---CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCCEEEEEC-CCCeEEEcC
Confidence 3566777753 445443322 256666554 33332221 22356777775 556665433 345777766
Q ss_pred CCCceEEEEcC------C--CCCcceeeecCCcce-EEEeeCCCCceEEEEecCCCCCEEEeec--CC--CCCeeEEeec
Q psy6572 639 DGRFRKVLINK------G--LQEPRGIALNPAYGY-MYWTDWGQNAHIGKAKMDGSNPKVIISK--NL--SWPNALTISY 705 (1416)
Q Consensus 639 dG~~~~vLi~~------~--l~~P~gIavDp~~g~-LYWtD~g~~~~I~ra~mDGs~r~vlv~~--~l--~~P~gLaiD~ 705 (1416)
.....+.+... . .....+|+.|+. |. ||+..++ ..|.+.+......+.+... .+ ....+|+.|.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~~lWigt~~--~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 461 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEK-KSLVYIGTHA--GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG 461 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETT-TTEEEEEETT--TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCC-CCEEEEEeCc--CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC
Confidence 54332222211 1 234678888865 56 7666543 2577777665443333221 11 2456788875
Q ss_pred CCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCeeEEecccC
Q psy6572 706 ETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKSIERCDKYT 774 (1416)
Q Consensus 706 ~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~I~~~nk~t 774 (1416)
.++|+++-. +.|.+.+......+.+...............+|... .+.|++... +.|++.+..+
T Consensus 462 -~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~ 526 (795)
T 4a2l_A 462 -EGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEG 526 (795)
T ss_dssp -SSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEET
T ss_pred -CCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCC
Confidence 677877654 567888776544333322100000111234566554 455655543 5576665443
No 416
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=77.52 E-value=0.3 Score=40.38 Aligned_cols=42 Identities=29% Similarity=0.680 Sum_probs=27.7
Q ss_pred eEEeeCCCceecCCCCCccccCCcCCCCCccceeee----cCCeeeecCCCCcEEecCCCceEe
Q psy6572 475 YKCACRKGYQVHPEDKHLCVDTNECLDRPCSHYCRN----TLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 475 y~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq~C~n----t~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
++|.|++||. .+.|.++. .|++ ..++|+|.|++||+ |..|..
T Consensus 3 ~~C~C~~g~~-----------~~pC~NGG---tC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD-----------AWYCLNDA---HCFAVKIADLPVYSCECAIGFM----GQRCEY 48 (52)
T ss_dssp CCBCCCHHHH-----------HHTSCTTC---EEEEEEETTEEEEEEECCTTEE----STTSCE
T ss_pred eeeECCCCCc-----------CCcCCCCC---EEecCccCCCCCEEEECCCCCc----CCCCcc
Confidence 4688999985 22344221 3454 35689999999997 556653
No 417
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=76.84 E-value=1.5e+02 Score=36.68 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=19.9
Q ss_pred EEEecCcEEEeecCCCeeEEecccCCCceEE
Q psy6572 750 LAVFEDHLFWTDWEMKSIERCDKYTGKNCTS 780 (1416)
Q Consensus 750 lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~ 780 (1416)
|+..++.||+.. ..+.|+.++..+|+.+-.
T Consensus 480 ~~tagg~vf~gt-~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 480 MATAGDLVFYGT-LDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEE
T ss_pred eEecCCEEEEEC-CCCeEEEEECCCCCEEEE
Confidence 555677788754 356777778777775443
No 418
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=76.58 E-value=1.1e+02 Score=34.69 Aligned_cols=191 Identities=8% Similarity=0.027 Sum_probs=94.9
Q ss_pred ccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEEee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCC-ceE
Q psy6572 567 TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELLFP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR-FRK 644 (1416)
Q Consensus 567 ~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~-~~~ 644 (1416)
..+..|+|.+.+..|...... .|....++....++.. ......+++.+..+.|.++-.+.++|.+-++... ...
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~----~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~ 95 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK----SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS 95 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS----EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC----EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE
Confidence 345677777766655433222 3433344322122212 4455667777777777777766778888887543 333
Q ss_pred EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCC-CCEEEeecCCCCCeeE-EeecCCCeEEEe-cCCCCeEE
Q psy6572 645 VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGS-NPKVIISKNLSWPNAL-TISYETNELFWG-DAHEDYIA 721 (1416)
Q Consensus 645 vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs-~r~vlv~~~l~~P~gL-aiD~~~~rLYWt-D~~~~~I~ 721 (1416)
.+. .....++|++.+. .++.+. ...|...++... .....+.. |.++ ++.+ ..|.++ -...+.|.
T Consensus 96 ~~~--~~~~v~~v~~~~~--~~~~~~---~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 96 RIK--VDAPVKDLFLSRE--FIVVSY---GDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIH 162 (355)
T ss_dssp EEE--CSSCEEEEEECSS--EEEEEE---TTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCTTCEE
T ss_pred EEE--CCCceEEEEEcCC--EEEEEE---cCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcCcEEE
Confidence 332 2235667777654 344432 125666666543 11111111 4333 2322 444444 44556677
Q ss_pred EEeCCCCc-----------------eEEEEeccCCCCcccccceeEEEe-cCcEEEeecCCCe-eEEecccCCCceEEE
Q psy6572 722 VSDLNGEN-----------------IKIIVSRRMDPTINLHHVFALAVF-EDHLFWTDWEMKS-IERCDKYTGKNCTSV 781 (1416)
Q Consensus 722 ~~~ldG~~-----------------r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwtD~~~~~-I~~~nk~tG~~~~~l 781 (1416)
..++.... .+ .+... -....+|++. .+.++.|-...+. |..-+..+|.....+
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~-~~~~h------~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGV-LIKAH------TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp EEECCC------------------CCE-EECCC------SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred EEECCCCCccccccccccccccCcccE-EEEcc------CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 76665432 11 12211 2234566663 4566666666665 665565556554444
No 419
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=76.47 E-value=0.21 Score=55.56 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=37.0
Q ss_pred cceecCCceEEeeCCCceecCCCCCccc-cCCcC------C-----------------------CCCccc--eeeecCCe
Q psy6572 467 ECIDLKIGYKCACRKGYQVHPEDKHLCV-DTNEC------L-----------------------DRPCSH--YCRNTLGS 514 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p~d~~tC~-didEC------~-----------------------~~~Csq--~C~nt~gs 514 (1416)
+|++...+|+|.|++||+-. .|. ++++| . ..+|.. .|++..++
T Consensus 112 ~C~~~~~sy~C~C~~Gf~G~-----~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~ 186 (267)
T 4fbr_A 112 KTLTGTTTYNGEGPIGFKSE-----VTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMT 186 (267)
T ss_dssp SEEEEEEEETTSCCEEEEEE-----ECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEE
T ss_pred EEecCCccEEeeCCCCcccc-----CCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCC
Confidence 78999999999999999743 222 12221 1 122222 57888889
Q ss_pred eeecCCCCcE
Q psy6572 515 YSCSCAPGYA 524 (1416)
Q Consensus 515 y~C~C~~Gy~ 524 (1416)
|+|.|++||+
T Consensus 187 y~C~Cp~Gf~ 196 (267)
T 4fbr_A 187 YNGEGPIGFR 196 (267)
T ss_dssp ETTSCCEEEE
T ss_pred eEEeCCCCcc
Confidence 9999999997
No 420
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=75.47 E-value=1.1 Score=38.31 Aligned_cols=29 Identities=24% Similarity=0.613 Sum_probs=21.7
Q ss_pred ccee-----cCCceEEeeCCCceecCCCCCccc-cCCcCC
Q psy6572 467 ECID-----LKIGYKCACRKGYQVHPEDKHLCV-DTNECL 500 (1416)
Q Consensus 467 ~C~n-----t~~gy~C~C~~Gy~L~p~d~~tC~-didEC~ 500 (1416)
.|++ ..++|+|.|++||. |..|+ ++++|.
T Consensus 19 ~C~~~~~~~~~~~y~C~C~~Gf~-----G~~Ce~~i~~~~ 53 (63)
T 1hae_A 19 ECFMVKDLSNPSRYLCKCQPGFT-----GARCTENVPMKV 53 (63)
T ss_dssp EEEEEESSSSSCCEEEECCTTEE-----STTSCEECCSSC
T ss_pred EEecCCccCCCCCEEEECCCCCc-----CCccCcCcCccc
Confidence 6776 56889999999994 45685 677764
No 421
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=74.60 E-value=1.2e+02 Score=34.28 Aligned_cols=222 Identities=9% Similarity=0.004 Sum_probs=102.3
Q ss_pred ceEecCCCCCeEEEEecEEEEEEecCCcceEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCe-EEee-c
Q psy6572 531 GCKATSDVPPNLLFTNKYYIREVTQAGVMTIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPE-LLFP-A 608 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~~~~I~~i~l~g~~~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~-~l~~-l 608 (1416)
++.+..+...+|..+....++..++.....+.......+..+++.+..+.+.++-... +.|+..++.+... ..+. .
T Consensus 23 ~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~v~iWd~~~~~~~~~~~~~ 100 (355)
T 3vu4_A 23 TDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVK--EVVHIWDDVKKQDVSRIKVD 100 (355)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSST--TEEEEEETTTTEEEEEEECS
T ss_pred EEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCc--cEEEEEECCCCcEEEEEECC
Confidence 3444443344555554444554444433322222222344556666666666554443 2666666652211 1111 2
Q ss_pred CCCceEEEEccCCcEEEeeCCCCeEEEeecCCC--ceEEEEcCCCCCcce-eeecCCcceEEEeeCCCCceEEEEecCCC
Q psy6572 609 TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGR--FRKVLINKGLQEPRG-IALNPAYGYMYWTDWGQNAHIGKAKMDGS 685 (1416)
Q Consensus 609 ~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~--~~~vLi~~~l~~P~g-IavDp~~g~LYWtD~g~~~~I~ra~mDGs 685 (1416)
..+.+|++ ....++.+. .++|.+.++... ....+.. |.+ +++.+ .+|.++.......|...++...
T Consensus 101 ~~v~~v~~--~~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~-----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 101 APVKDLFL--SREFIVVSY--GDVISVFKFGNPWKRITDDIR-----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp SCEEEEEE--CSSEEEEEE--TTEEEEEESSTTCCBSSCCEE-----EEEEEEEET--TEEEEEESSCTTCEEEEECCC-
T ss_pred CceEEEEE--cCCEEEEEE--cCEEEEEECCCCceeeEEecc-----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCC
Confidence 23344444 344555543 356777777644 1111111 333 23333 4444431122234555555432
Q ss_pred C----------------CEEEeecCCCCCeeEEeecCCCeEEEecCCCCe-EEEEeCC-CCceEEEEec-cCCCCccccc
Q psy6572 686 N----------------PKVIISKNLSWPNALTISYETNELFWGDAHEDY-IAVSDLN-GENIKIIVSR-RMDPTINLHH 746 (1416)
Q Consensus 686 ~----------------r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~-I~~~~ld-G~~r~~v~~~-~~~p~~~l~~ 746 (1416)
. ....+...-.....|++.+ .++++.+-...+. |...++. |.....+..+ . ...
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h------~~~ 242 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD------RAD 242 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC------CSC
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC------CCc
Confidence 2 0122233344567899987 4555555445565 8777875 4444444322 1 233
Q ss_pred ceeEEEe-cCcEEEeecCCCeeEEecc
Q psy6572 747 VFALAVF-EDHLFWTDWEMKSIERCDK 772 (1416)
Q Consensus 747 P~~lav~-~d~LYwtD~~~~~I~~~nk 772 (1416)
..+|++. .+.++.+-...+.|..-+.
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 4566664 3455555555555554443
No 422
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=74.35 E-value=1.1 Score=38.43 Aligned_cols=33 Identities=27% Similarity=0.656 Sum_probs=23.8
Q ss_pred CcCCCCCccc--eeee-----cCCeeeecCCCCcEEecCCCceE
Q psy6572 497 NECLDRPCSH--YCRN-----TLGSYSCSCAPGYALLSDKHGCK 533 (1416)
Q Consensus 497 dEC~~~~Csq--~C~n-----t~gsy~C~C~~Gy~L~~dg~sC~ 533 (1416)
++|...+|.+ .|++ ..++|+|.|++||+ |..|.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 3444455654 6776 66899999999997 66774
No 423
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=74.29 E-value=1.7 Score=40.62 Aligned_cols=54 Identities=22% Similarity=0.618 Sum_probs=42.3
Q ss_pred cee-cCCceEEeeCCCceecCCCCCccccC--CcCC--CCCccc--eeeecC-----CeeeecCCCCcE
Q psy6572 468 CID-LKIGYKCACRKGYQVHPEDKHLCVDT--NECL--DRPCSH--YCRNTL-----GSYSCSCAPGYA 524 (1416)
Q Consensus 468 C~n-t~~gy~C~C~~Gy~L~p~d~~tC~di--dEC~--~~~Csq--~C~nt~-----gsy~C~C~~Gy~ 524 (1416)
|.. .++-.+|.|.+||.. ++..|+.+ +.|+ ++.|.. .|+.+. +...|.|.+||.
T Consensus 18 C~r~~~g~e~C~C~~gy~g---dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 18 CFRHLDEREECKCLLNYKQ---EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EECCTTSCCEEEECTTEEE---ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eEEcCCCCEEEEecCCeec---CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 455 568899999999984 57789887 5787 578875 788774 578999999974
No 424
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=74.20 E-value=2.5 Score=33.84 Aligned_cols=21 Identities=43% Similarity=0.986 Sum_probs=16.7
Q ss_pred ccc-cceecC--CceEEeeCCCce
Q psy6572 464 CAH-ECIDLK--IGYKCACRKGYQ 484 (1416)
Q Consensus 464 Cs~-~C~nt~--~gy~C~C~~Gy~ 484 (1416)
|.+ .|++.. ++|+|.|++||.
T Consensus 14 C~nG~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 14 CLHGQCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp CSSEEEEEETTTTEEEEEECTTCS
T ss_pred CCCCEeeccCCCCCEEEECCCCCc
Confidence 655 687755 689999999994
No 425
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=73.46 E-value=1.3e+02 Score=34.11 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=40.3
Q ss_pred CCeEEEecCCCCeEEEEeC-CCCceEEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEecccCCCc
Q psy6572 707 TNELFWGDAHEDYIAVSDL-NGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCDKYTGKN 777 (1416)
Q Consensus 707 ~~rLYWtD~~~~~I~~~~l-dG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~nk~tG~~ 777 (1416)
.++||+.. ..+.|..+++ +|..+-. .. +..+.++++.+++||++.. .+.|+.++..+|+.
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~~~w~---~~------~~~~~~~~~~~~~l~~~~~-~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQIMWK---RE------LGSVNDFIVDGNRIYLVDQ-NDRVMALTIDGGVT 299 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCCEEEE---EC------CCCEEEEEEETTEEEEEET-TCCEEEEETTTCCE
T ss_pred CCEEEEEe-cCcEEEEEECCCCcEEee---cc------CCCCCCceEECCEEEEEcC-CCeEEEEECCCCcE
Confidence 57888775 3567888886 4543322 11 3445677888999999875 45788888777764
No 426
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=71.87 E-value=2.1e+02 Score=36.03 Aligned_cols=132 Identities=11% Similarity=0.025 Sum_probs=72.9
Q ss_pred ceEEEEccCC-cEEEeeCC-----CCeEEEeecCCCceEEEEcCCCCCc-ceeeecCCc-ceEEEeeCCCCceEEEEecC
Q psy6572 612 DGLTVDWVGR-NLYWCDKG-----LDTIEVAKLDGRFRKVLINKGLQEP-RGIALNPAY-GYMYWTDWGQNAHIGKAKMD 683 (1416)
Q Consensus 612 ~gLAvD~~~~-~LYwtD~~-----~~~I~v~~ldG~~~~vLi~~~l~~P-~gIavDp~~-g~LYWtD~g~~~~I~ra~mD 683 (1416)
.+||||+... +||++-.. .+.|++..=.|..-+.+. .. ..| ..|+++|.+ +.||+... ...|++.. |
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~-~p-~~~~~~l~~~P~~~~~l~a~~~--~~gly~S~-D 167 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD-LP-FHPLTQMMYSPQNSDYLLALST--ENGLWVSK-N 167 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE-CS-SCBSSCCEEETTEEEEEEEEBT--TCCEEEES-S
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc-CC-CCCceEEEEecCCCCEEEEEEC--CCCEEEEe-C
Confidence 5799999754 78888642 467777765565433332 11 223 379999975 46777642 23677754 5
Q ss_pred CCCCEEEeecCCCCCeeEEeecCCCeEEEecCCC-------C--eEEEEeCCCCceEEEEeccCCCCcccccceeEEEec
Q psy6572 684 GSNPKVIISKNLSWPNALTISYETNELFWGDAHE-------D--YIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFE 754 (1416)
Q Consensus 684 Gs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~-------~--~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~ 754 (1416)
|...-..+...+. ..... ..+.|||.-... + .|.+..--|...++|. .+..++++.+
T Consensus 168 gG~TW~~i~~~v~---~~~f~-~~~~Iy~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~----------~~i~~f~~~~ 233 (685)
T 3f6k_A 168 FGGKWEEIHKAVC---LAKWG-SDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIG----------VKIYSFGLGG 233 (685)
T ss_dssp TTSSEEEEESSEE---EEEEC-STTCEEEEECSSSCTTTTTTSEEEEEESSTTSSCEEEE----------EEEEEEEEET
T ss_pred CCCCcEEeecCcc---ccccC-CCCeEEEEeeccccccCCCCceEEEEecCCCCCceEee----------ccceeeeeee
Confidence 5444444443332 12222 246778763221 1 2333322333333332 3456778888
Q ss_pred CcEEEeec
Q psy6572 755 DHLFWTDW 762 (1416)
Q Consensus 755 d~LYwtD~ 762 (1416)
++||++-.
T Consensus 234 ~yl~va~~ 241 (685)
T 3f6k_A 234 RFLFASVM 241 (685)
T ss_dssp TEEEEEEE
T ss_pred eEEEEEEe
Confidence 99988753
No 427
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=71.60 E-value=1.3e+02 Score=33.47 Aligned_cols=115 Identities=7% Similarity=-0.049 Sum_probs=69.1
Q ss_pred CCCceEEEEc-cCCcEEEeeCCCCeEEEeecCCCceEEEEc-CCCCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 609 TSPDGLTVDW-VGRNLYWCDKGLDTIEVAKLDGRFRKVLIN-KGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 609 ~~p~gLAvD~-~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~-~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
..+..|++.+ ..++++.+-...++|.+.++.......+.. ........+++.|...+|..... ...|...++....
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~--dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP--DGILDVYNLSSPD 203 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT--TSCEEEEESSCTT
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC--CCEEEEEECCCCC
Confidence 3466777776 245566666677889999987655533332 22335789999997555444332 3367777776544
Q ss_pred CE-EEeec-CCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCC
Q psy6572 687 PK-VIISK-NLSWPNALTISYETNELFWGDAHEDYIAVSDLNG 727 (1416)
Q Consensus 687 r~-vlv~~-~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG 727 (1416)
.. ..+.. .-.....|++.+....|..+. .+.|...++..
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~ 244 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRK 244 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTS
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCC
Confidence 33 23332 345567888887555565555 33777777654
No 428
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=70.88 E-value=2.8 Score=46.94 Aligned_cols=41 Identities=44% Similarity=1.084 Sum_probs=34.2
Q ss_pred cCCcCC-----CCCccceeeecCCeeeecCCCCcEEecCCCceEec
Q psy6572 495 DTNECL-----DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 495 didEC~-----~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
+.++|. ...|.|.|.|..|+|.|.|.+||.|..+.++|.+.
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 165 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCccc
Confidence 445664 24799999999999999999999999999988753
No 429
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=70.54 E-value=1.7 Score=50.17 Aligned_cols=74 Identities=30% Similarity=0.787 Sum_probs=6.8
Q ss_pred CCCCCCCCCCcccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccc--eeeecCCee
Q psy6572 440 DCGDNSDEFSCFVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSH--YCRNTLGSY 515 (1416)
Q Consensus 440 dC~dgsDe~~C~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq--~C~nt~gsy 515 (1416)
.|..|.....|.+++|.. . |.+ .|+. .++|.|++||. +..|. +++|. .+|+. .|++ .|
T Consensus 232 ~C~~G~~G~~C~~~~C~~---~--C~~~g~C~~---~~~C~C~~G~~-----G~~C~-~~~C~-~~C~~~g~C~~---~~ 293 (324)
T 2ygq_A 232 ICPPGLEGEQCEISKCPQ---P--CRNGGKCIG---KSKCKCSKGYQ-----GDLCS-KPVCE-PGCGAHGTCHE---PN 293 (324)
T ss_dssp CCCTTCCTTTTC--------------------------------------------------------------------
T ss_pred eCCCCccCCCCCcCcCCC---c--CCCCCEECC---CCEEECCCCCc-----CCCCc-CCCCC-CCCCCCCEECC---CC
Confidence 455555555666666641 1 433 4543 58999999995 33565 34554 34532 4554 58
Q ss_pred eecCCCCcEEecCCCceEec
Q psy6572 516 SCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 516 ~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
+|.|.+||. |..|...
T Consensus 294 ~C~C~~G~~----G~~C~~~ 309 (324)
T 2ygq_A 294 KCQCQEGWH----GRHCNKR 309 (324)
T ss_dssp --------------------
T ss_pred EeECCCCCc----CCCCCCC
Confidence 999999997 6677654
No 430
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=70.26 E-value=1.1e+02 Score=39.53 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=86.4
Q ss_pred ccceeeeeecCC-CeEEEeeccCCCccEEEEecC-CCCeEEee--------cCCCceEEEEccC-CcEEEeeCC-C----
Q psy6572 567 TNAVGLDFDWVD-NCLYWSDVTMHGSSIRRSCNN-SQPELLFP--------ATSPDGLTVDWVG-RNLYWCDKG-L---- 630 (1416)
Q Consensus 567 ~~~~~l~~D~~~-~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--------l~~p~gLAvD~~~-~~LYwtD~~-~---- 630 (1416)
..+.+|++++.+ +.||..... ..|+|..-. ...+.+.. .....+||||+.. +.||++-.. .
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~---ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDI---GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESS---SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CcEEEEEECCCCCCEEEEEecC---CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 467788888765 445554222 257766544 22333322 1346789999854 567775432 2
Q ss_pred CeEEEeecCCCceEEEEcC-CC----C---CcceeeecCCcc-eEEEeeCCCCceEEEEecCCCCCEEEeecC-----CC
Q psy6572 631 DTIEVAKLDGRFRKVLINK-GL----Q---EPRGIALNPAYG-YMYWTDWGQNAHIGKAKMDGSNPKVIISKN-----LS 696 (1416)
Q Consensus 631 ~~I~v~~ldG~~~~vLi~~-~l----~---~P~gIavDp~~g-~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~-----l~ 696 (1416)
..|++..=.|..-+.+... .+ . ....|+|+|.+. .||... ....|++..=.|..=+.+.... -.
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~--~~~gl~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT--RTEGIWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC--SSSCEEEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe--ccCCEEEECCCCcccCCCccCccccCCCC
Confidence 5777776566654443321 11 0 235799999764 555543 1246777655555544433210 01
Q ss_pred CCeeEEeecCC-CeEEEecCCCCeEEEEeCCCCceEE
Q psy6572 697 WPNALTISYET-NELFWGDAHEDYIAVSDLNGENIKI 732 (1416)
Q Consensus 697 ~P~gLaiD~~~-~rLYWtD~~~~~I~~~~ldG~~r~~ 732 (1416)
....|++|+.+ ++||.+-.....|++..-.|..-+.
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~ 206 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEP 206 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEE
T ss_pred CeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCccc
Confidence 23467788754 4788765443566665444444333
No 431
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=70.18 E-value=2.6 Score=47.51 Aligned_cols=33 Identities=55% Similarity=1.223 Sum_probs=29.6
Q ss_pred CCccceeeecCCeeeecCCCCcEEecCCCceEe
Q psy6572 502 RPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 502 ~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
..|+|.|.|+.|+|.|.|.+||.|..++++|.+
T Consensus 131 ~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~~ 163 (286)
T 1nt0_A 131 VPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSA 163 (286)
T ss_dssp -CCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccCCCccccccCceEeecCCCceeccCCCCccc
Confidence 359999999999999999999999999988874
No 432
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=69.33 E-value=4 Score=45.98 Aligned_cols=33 Identities=27% Similarity=0.703 Sum_probs=27.5
Q ss_pred CCcccccccccccCCCCCeEEecCCCceeccCCCCccceee
Q psy6572 1294 RTCSQICIEKKISNTERTFSCHCAEGYHMVHGKNKTSSCVA 1334 (1416)
Q Consensus 1294 ~~Csq~C~n~~~~n~~gs~~C~C~~gy~~~~~~~~~~~Cka 1334 (1416)
..|+|.|.|+. |+|.|+|.+||.|..++ .+|++
T Consensus 131 ~~c~~~C~n~~-----g~~~csC~~Gy~L~~d~---~~C~~ 163 (286)
T 1nt0_A 131 VPCDHYCHXYL-----GGYYCSCRVGYILHQNK---HTCSA 163 (286)
T ss_dssp -CCSSEEEEET-----TEEEEECCTTEEECTTS---SCEEE
T ss_pred ccCCCcccccc-----CceEeecCCCceeccCC---CCccc
Confidence 35899998777 99999999999998874 57875
No 433
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=67.63 E-value=2e+02 Score=35.96 Aligned_cols=15 Identities=27% Similarity=0.687 Sum_probs=12.8
Q ss_pred ceeeecCCcceEEEe
Q psy6572 655 RGIALNPAYGYMYWT 669 (1416)
Q Consensus 655 ~gIavDp~~g~LYWt 669 (1416)
.++|+||.+|+||+.
T Consensus 384 ~~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIP 398 (668)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CcceECCCCCEEEEe
Confidence 458999999999984
No 434
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=67.48 E-value=1.4e+02 Score=37.95 Aligned_cols=117 Identities=13% Similarity=0.091 Sum_probs=66.0
Q ss_pred cceeeeeecCC-CeEEEeeccCCCccEEEEecC-CCCeEEee-c-------CCCceEEEEcc-CCcEEEeeCC-------
Q psy6572 568 NAVGLDFDWVD-NCLYWSDVTMHGSSIRRSCNN-SQPELLFP-A-------TSPDGLTVDWV-GRNLYWCDKG------- 629 (1416)
Q Consensus 568 ~~~~l~~D~~~-~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~-l-------~~p~gLAvD~~-~~~LYwtD~~------- 629 (1416)
.+.+|+|++.+ +.||.. ... ..|+|..-. ...+.|.. + ....+|+||+. .+.||++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~~-~~~--ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYAR-AAI--GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEE-CSS--SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEE-ecC--CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 67889999876 455553 322 367777644 33333322 1 24668999985 4678876432
Q ss_pred -CCeEEEeecCCCceEEEEcC-CC-------CCcceeeecCCc-ceEEEeeCCCCceEEEEecCCCCCE
Q psy6572 630 -LDTIEVAKLDGRFRKVLINK-GL-------QEPRGIALNPAY-GYMYWTDWGQNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 630 -~~~I~v~~ldG~~~~vLi~~-~l-------~~P~gIavDp~~-g~LYWtD~g~~~~I~ra~mDGs~r~ 688 (1416)
...|++..=.|..-+.+... .+ .....|++||.+ +.||..... ...|+|..=.|..=+
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g~gl~~S~DgG~tW~ 168 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-GNGLWRSTDYGVTWS 168 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-TCCEEEESSTTSSCE
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-CCcEEEeCCCCccee
Confidence 24677766556553333221 11 012589999986 567776521 135776654454433
No 435
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=66.92 E-value=4.9 Score=48.03 Aligned_cols=51 Identities=27% Similarity=0.823 Sum_probs=32.6
Q ss_pred cCCceEEeeCCCceecCCCCCccccCCcCCC----C------Cccc--eeeecCCeeeecCCCCcEEecCCCceEec
Q psy6572 471 LKIGYKCACRKGYQVHPEDKHLCVDTNECLD----R------PCSH--YCRNTLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 471 t~~gy~C~C~~Gy~L~p~d~~tC~didEC~~----~------~Csq--~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
.+++|+|.|++||. +..|.. +|.. . +|.. .|.+.. .|.|++||. |..|...
T Consensus 259 ~~~~~~C~C~~G~~-----G~~C~~--~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~----G~~Ce~~ 321 (423)
T 2gy5_A 259 LPDPYGCSCATGWK-----GLQCNE--ACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ----GLQCERE 321 (423)
T ss_dssp ETTTTEEECCBTCB-----SGGGCB--CCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB----STTSCBC
T ss_pred CCCCCeEEeCCCcc-----cccccC--ccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc----CCCCccC
Confidence 47889999999995 345543 2221 0 2322 565543 399999997 6677654
No 436
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=66.41 E-value=68 Score=41.15 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=71.8
Q ss_pred CCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc-C----------CCCCcceeeecCC-cceEEEeeC-----
Q psy6572 609 TSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN-K----------GLQEPRGIALNPA-YGYMYWTDW----- 671 (1416)
Q Consensus 609 ~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~-~----------~l~~P~gIavDp~-~g~LYWtD~----- 671 (1416)
..+.+|+|++...+++|+-...+.|++..=.|+.-+.+.. . ......+|++||. .+.||.+.+
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccC
Confidence 4567888888876555555555677777666655443332 1 2234678999995 467887654
Q ss_pred CCCceEEEEecCCCCCEEEeec-CC-----CCC--eeEEeecCC-CeEEEecCCCCeEEEEeCCCCceEEE
Q psy6572 672 GQNAHIGKAKMDGSNPKVIISK-NL-----SWP--NALTISYET-NELFWGDAHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 672 g~~~~I~ra~mDGs~r~vlv~~-~l-----~~P--~gLaiD~~~-~rLYWtD~~~~~I~~~~ldG~~r~~v 733 (1416)
+....|+|..=.|..=+.+... .+ ... ..|+|++.+ ++||.+- ....|++..=.|..=+.+
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~TW~~~ 170 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRSTDRAQTWSRM 170 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEESSTTSSCEEC
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEECCCCcCcccc
Confidence 2235677776556554444321 11 111 368998764 5666653 345677665445444433
No 437
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=65.46 E-value=2.8e+02 Score=34.88 Aligned_cols=32 Identities=13% Similarity=-0.005 Sum_probs=20.2
Q ss_pred eEEEecCcEEEeecCCCeeEEecccCCCceEEE
Q psy6572 749 ALAVFEDHLFWTDWEMKSIERCDKYTGKNCTSV 781 (1416)
Q Consensus 749 ~lav~~d~LYwtD~~~~~I~~~nk~tG~~~~~l 781 (1416)
.|+..++.||.. ...+.|+.++..+|+.+-.+
T Consensus 481 ~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 481 TLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEETTTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred cceECCCEEEEE-CCCCcEEEEECCCCccceee
Confidence 344456667766 35677888887788755433
No 438
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=65.14 E-value=3.6 Score=32.60 Aligned_cols=18 Identities=28% Similarity=0.678 Sum_probs=15.6
Q ss_pred cce--ecCCceEEeeCCCce
Q psy6572 467 ECI--DLKIGYKCACRKGYQ 484 (1416)
Q Consensus 467 ~C~--nt~~gy~C~C~~Gy~ 484 (1416)
.|+ +..++|+|.|++||.
T Consensus 16 ~C~~~~~~~~~~C~C~~G~~ 35 (45)
T 1a3p_A 16 VXMHIESLDSYTCNCVIGYS 35 (45)
T ss_dssp EEEECTTTSSEEEECCTTEE
T ss_pred EEEeecCCCCEEEEcCCCCc
Confidence 577 678999999999995
No 439
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=64.15 E-value=3e+02 Score=34.75 Aligned_cols=213 Identities=12% Similarity=0.022 Sum_probs=101.4
Q ss_pred CCeEEEEecEEEEEEecCCcc-eEEe--ccc--ccceeeeeecCCCeEEEeeccCCCccEEEEecCCC-CeEEee--cCC
Q psy6572 539 PPNLLFTNKYYIREVTQAGVM-TIRI--HNQ--TNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQ-PELLFP--ATS 610 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g~~-~~~~--~~l--~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~-~~~l~~--l~~ 610 (1416)
..+|.++....|.+++ |.. .... ..+ ..+..|..|. .+.||+.... .+++++..+. .+.... ...
T Consensus 32 ~G~lWigT~~GL~ryD--G~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigT~~----Gl~~yd~~~~~f~~~~~~~~~~ 104 (758)
T 3ott_A 32 EGLIWIGSNKGLFSYD--GYSTQQHFTYGENNNTRIYCGVIID-NTYLYMGTDN----GILVYNYRADRYEQPETDFPTD 104 (758)
T ss_dssp TSCEEEEESSCEEEEC--SSCEEECSCTTSTTSSCEEEEEEET-TTEEEEEETT----EEEEEETTTTEECCCSCCCCSC
T ss_pred CCCEEEEECCCccccC--CCceEEEEccCCCCCceEEEEEEcC-CCcEEEEeCC----CeEEEeCCCCEEECcccCCCce
Confidence 4566676666676664 322 1111 111 2245565554 5666665322 4677765521 111001 112
Q ss_pred CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEc--CC--CCCcceeeecCCcceEEEeeCCCCceEEEEecCCCC
Q psy6572 611 PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLIN--KG--LQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDGSN 686 (1416)
Q Consensus 611 p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~--~~--l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~ 686 (1416)
+..|+. ..++|++.... .|.+.+......+.+.. .. ......|+.|.. |.||+... ..|.+.+.....
T Consensus 105 i~~i~~--~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~---~Gl~~~~~~~~~ 176 (758)
T 3ott_A 105 VRTMAL--QGDTLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKD-NQIYVGTY---NGLCRYIPSNGK 176 (758)
T ss_dssp EEEEEE--ETTEEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTT-CCEEEEET---TEEEEEETTTTE
T ss_pred EEEEEe--cCCcEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCC-CCEEEEeC---CCHhhCccCCCc
Confidence 334443 36777776543 67777765443333311 11 223567778764 77777653 257766654432
Q ss_pred CEEEeecC---CC--CCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEe
Q psy6572 687 PKVIISKN---LS--WPNALTISYETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWT 760 (1416)
Q Consensus 687 r~vlv~~~---l~--~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwt 760 (1416)
.+.+.... +. ....|..|...+.|++.. . +.|.+.+......+.+.... -....+|... .+.|++.
T Consensus 177 ~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt-~-~Gl~~~~~~~~~~~~~~~l~------~~~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 177 FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT-E-GYLFQYFPSTGQIKQTEAFH------NNSIKSLALDGNGDLLAG 248 (758)
T ss_dssp EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-E-EEEEEEETTTTEEEEEEEEE------EEEEEEEEECTTCCEEEE
T ss_pred eEEecCCCccccccceeEEEEEECCCCEEEEEE-C-CCCeEEcCCCCeEEeccCCC------CCeEEEEEEcCCCCEEEE
Confidence 22221111 11 134677775444455543 2 45777776544333222110 1224556655 4555554
Q ss_pred ecCCCeeEEecccCCC
Q psy6572 761 DWEMKSIERCDKYTGK 776 (1416)
Q Consensus 761 D~~~~~I~~~nk~tG~ 776 (1416)
. . +.|.++++.++.
T Consensus 249 T-~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 249 T-D-NGLYVYHNDTTP 262 (758)
T ss_dssp E-T-TEEEEECCTTSC
T ss_pred e-C-CceeEEecCCCc
Confidence 4 2 467777654443
No 440
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=64.00 E-value=2.1e+02 Score=32.91 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=82.7
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc-e---EEEEcCCCCCcceeeecCCcceEEEeeCCC-CceEEEEec
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF-R---KVLINKGLQEPRGIALNPAYGYMYWTDWGQ-NAHIGKAKM 682 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~-~---~vLi~~~l~~P~gIavDp~~g~LYWtD~g~-~~~I~ra~m 682 (1416)
...+.++++.+.+..| .+-...+.|.+.++.... . ............+++..|..+.|+.+-.+. ...|..-++
T Consensus 230 ~~~~~~~~~~~~g~~l-~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred ccceeeeeecCCCCee-eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 4455566666544444 444455667666654221 1 111123334467888888877777664332 235555555
Q ss_pred CCCCCEEEeecCCCCCeeEEeecCCCeEEEecC-CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEe
Q psy6572 683 DGSNPKVIISKNLSWPNALTISYETNELFWGDA-HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWT 760 (1416)
Q Consensus 683 DGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~-~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwt 760 (1416)
........+. .-..+..+++.+..+.|+.+-. ..+.|...++........+.++ .....+|++. .+.+++|
T Consensus 309 ~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH------~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 309 CSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH------TSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp TTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSCEEE
T ss_pred Cccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC------CCCEEEEEEcCCCCEEEE
Confidence 4332222222 2344567777777777776643 3567888887544333333332 2345667764 4555566
Q ss_pred ecCCCeeEEec
Q psy6572 761 DWEMKSIERCD 771 (1416)
Q Consensus 761 D~~~~~I~~~n 771 (1416)
-...+.|..=+
T Consensus 382 ~s~D~tvriWd 392 (420)
T 4gga_A 382 AAADETLRLWR 392 (420)
T ss_dssp EETTTEEEEEC
T ss_pred EecCCeEEEEE
Confidence 55555554333
No 441
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=63.74 E-value=2.1e+02 Score=32.87 Aligned_cols=183 Identities=8% Similarity=-0.028 Sum_probs=95.3
Q ss_pred CeEEEEecEEEEEEecCCcc-e-EE-ecc-cccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeEE-eecCCCceE
Q psy6572 540 PNLLFTNKYYIREVTQAGVM-T-IR-IHN-QTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPELL-FPATSPDGL 614 (1416)
Q Consensus 540 ~~li~s~~~~I~~i~l~g~~-~-~~-~~~-l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~l-~~l~~p~gL 614 (1416)
.+|.++-...|+.-++.... . ++ ..+ ...+.+|+|.+.++.|...... +.|....+.+...+. .......-.
T Consensus 117 n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 117 NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcCCCcEEEEEeCCCCceE
Confidence 35555556666666665443 2 22 222 2347889998877766654433 367777776322211 112223334
Q ss_pred EEEccCCcEEEeeCCCCeEEEeecCCCceEE-EEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC-CCC---EE
Q psy6572 615 TVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV-LINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG-SNP---KV 689 (1416)
Q Consensus 615 AvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v-Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG-s~r---~v 689 (1416)
++.|. +.+..+-...+.|.+.+.......+ .+........+++..|...+|+..... ..|...++.. ... ..
T Consensus 194 ~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D--~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 194 SLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND--NLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT--SCEEEEESSCCSSCSCCSE
T ss_pred EEeeC-CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc--ccceEEeeccccccceeee
Confidence 45543 4455566666777777766544332 233445667788888876666554422 2344444332 111 11
Q ss_pred EeecCCCCCeeEEeecCCCeEEEecC--CCCeEEEEeCCCC
Q psy6572 690 IISKNLSWPNALTISYETNELFWGDA--HEDYIAVSDLNGE 728 (1416)
Q Consensus 690 lv~~~l~~P~gLaiD~~~~rLYWtD~--~~~~I~~~~ldG~ 728 (1416)
...........+++.+....|+.+-. ..+.|...++...
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 11122233456777766666655432 2356776676443
No 442
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=63.70 E-value=3.9 Score=47.08 Aligned_cols=67 Identities=28% Similarity=0.764 Sum_probs=23.9
Q ss_pred CCCCCCCCCCcccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccccCCcCCCCCccc--eeeecCCee
Q psy6572 440 DCGDNSDEFSCFVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECLDRPCSH--YCRNTLGSY 515 (1416)
Q Consensus 440 dC~dgsDe~~C~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~~~~Csq--~C~nt~gsy 515 (1416)
.|..|.....|...+|.. . |.+ .|++ .++|.|++||. +..|+ +++|. .+|.. .|+ +.|
T Consensus 200 ~C~~G~~G~~C~~~~C~~---~--C~~~G~C~~---~~~C~C~~G~~-----G~~C~-~~~C~-~~C~~~g~C~---~~~ 261 (324)
T 2ygq_A 200 ICPPGFYGVNCDKANCST---T--CFNGGTCFY---PGKCICPPGLE-----GEQCE-ISKCP-QPCRNGGKCI---GKS 261 (324)
T ss_dssp ECCTTCBTTTTCBCCCSS---C--CCSSCCBSC---SSCBCCCTTCC-----TTTTC-----------------------
T ss_pred eCCCCccCCCcccCcCCC---C--CCCCCeeCC---CCeeeCCCCcc-----CCCCC-cCcCC-CcCCCCCEEC---CCC
Confidence 345544444555555531 1 432 4554 37899999995 44675 45554 34433 454 368
Q ss_pred eecCCCCcE
Q psy6572 516 SCSCAPGYA 524 (1416)
Q Consensus 516 ~C~C~~Gy~ 524 (1416)
+|.|++||.
T Consensus 262 ~C~C~~G~~ 270 (324)
T 2ygq_A 262 KCKCSKGYQ 270 (324)
T ss_dssp ---------
T ss_pred EEECCCCCc
Confidence 999999997
No 443
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=61.79 E-value=2.2e+02 Score=32.49 Aligned_cols=51 Identities=6% Similarity=-0.151 Sum_probs=28.7
Q ss_pred cEEEEEEecCCcc--eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC
Q psy6572 547 KYYIREVTQAGVM--TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN 599 (1416)
Q Consensus 547 ~~~I~~i~l~g~~--~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~ 599 (1416)
...|+.-++.... ..+......+.+++|.+.+..++.+-... +.|+..++.
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d--~~v~~wd~~ 217 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN--GNIRIFDWT 217 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT--SEEEEEETT
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC--CEEEEEECC
Confidence 4456555554333 23334445677899988776555554442 366666655
No 444
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=61.44 E-value=1.8e+02 Score=31.29 Aligned_cols=185 Identities=8% Similarity=-0.031 Sum_probs=89.4
Q ss_pred eEEEEecEEEEEEecCCcc--eEE-ec-ccccceeeeeecCCCeEEEeeccCCCccEEEEecCCCCeE-EeecCCCceEE
Q psy6572 541 NLLFTNKYYIREVTQAGVM--TIR-IH-NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNNSQPEL-LFPATSPDGLT 615 (1416)
Q Consensus 541 ~li~s~~~~I~~i~l~g~~--~~~-~~-~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~s~~~~-l~~l~~p~gLA 615 (1416)
+|.++....|+.-++.... .++ .. ....+.+|+|.+.++.|.-.... +.|+...+.+...+ ........-.+
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecCCceeEEEecCccceEEE
Confidence 5555556667766665443 222 22 23346789998877766544333 36777766632211 11123333344
Q ss_pred EEccCCcEEEeeCCCCeEEEeecCCCceEE-EEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecCC-CCC--E-EE
Q psy6572 616 VDWVGRNLYWCDKGLDTIEVAKLDGRFRKV-LINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG-SNP--K-VI 690 (1416)
Q Consensus 616 vD~~~~~LYwtD~~~~~I~v~~ldG~~~~v-Li~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG-s~r--~-vl 690 (1416)
+.+... +..+-...+.+.+.........+ .+.........+++.+...+|+-.... ..|...++.. ... . ..
T Consensus 115 ~~~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~ 191 (318)
T 4ggc_A 115 LSWNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND--NLVNVWPSAPGEGGWVPLQT 191 (318)
T ss_dssp EEEETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT--SCEEEEESSCBTTBSCCSEE
T ss_pred eecCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC--cceeEEECCCCcccccceee
Confidence 444443 44444455555555554433222 223445556777777776666554432 2344444432 111 1 11
Q ss_pred eecCCCCCeeEEeecCCCeEEEec--CCCCeEEEEeCCCCceE
Q psy6572 691 ISKNLSWPNALTISYETNELFWGD--AHEDYIAVSDLNGENIK 731 (1416)
Q Consensus 691 v~~~l~~P~gLaiD~~~~rLYWtD--~~~~~I~~~~ldG~~r~ 731 (1416)
..........++..+....++++- ...+.|...++......
T Consensus 192 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 192 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp ECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred ecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 111222335566655555555432 23445666665544433
No 445
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=60.97 E-value=3.8 Score=45.79 Aligned_cols=34 Identities=21% Similarity=0.614 Sum_probs=28.6
Q ss_pred CCcccccccccccCCCCCeEEecCCCceeccCCCCccceeec
Q psy6572 1294 RTCSQICIEKKISNTERTFSCHCAEGYHMVHGKNKTSSCVAN 1335 (1416)
Q Consensus 1294 ~~Csq~C~n~~~~n~~gs~~C~C~~gy~~~~~~~~~~~Cka~ 1335 (1416)
..|+|.|.|+. |+|+|.|.+||.|..+. .+|++.
T Consensus 132 ~~c~~~C~n~~-----g~~~C~C~~Gy~l~~d~---~~C~~~ 165 (278)
T 3dem_A 132 LSCDHYCHNYI-----GGYYCSCRFGYILHTDN---RTCRVE 165 (278)
T ss_dssp CCCSSEEEEET-----TEEEEECCTTCEECTTS---SCEECC
T ss_pred ccCCcCcCCcc-----CCcEEEeCCcceeccCC---CCCccc
Confidence 47899998777 99999999999998774 578764
No 446
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=58.90 E-value=2e+02 Score=30.95 Aligned_cols=152 Identities=12% Similarity=-0.004 Sum_probs=77.6
Q ss_pred cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCc----eEEEEcCCCCCcceeeecCCcceEEEeeCCCC-ceEEEEec
Q psy6572 608 ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRF----RKVLINKGLQEPRGIALNPAYGYMYWTDWGQN-AHIGKAKM 682 (1416)
Q Consensus 608 l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~----~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~-~~I~ra~m 682 (1416)
......+++.+.+. ++++-...+.|.+.++.... ..............++..|....++++-.+.. ..|...++
T Consensus 150 ~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 150 SQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred cCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 44455566665444 44555556777777764321 11112123334567778777777665543332 34544444
Q ss_pred CCCCCEEEeecCCCCCeeEEeecCCCeEEEecC-CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe-cCcEEEe
Q psy6572 683 DGSNPKVIISKNLSWPNALTISYETNELFWGDA-HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF-EDHLFWT 760 (1416)
Q Consensus 683 DGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~-~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~-~d~LYwt 760 (1416)
........ .........+++.+..+.|+.+-. ..+.|...++........+.++ .....+|++. .+.++.|
T Consensus 229 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH------~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 229 CSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH------TSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp TTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSCEEE
T ss_pred cccccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC------CCCEEEEEEcCCCCEEEE
Confidence 43333222 223344567777777777776543 4567777776543333333332 2334566664 3444444
Q ss_pred ecCCCee
Q psy6572 761 DWEMKSI 767 (1416)
Q Consensus 761 D~~~~~I 767 (1416)
-...+.|
T Consensus 302 ~s~D~~v 308 (318)
T 4ggc_A 302 AAADETL 308 (318)
T ss_dssp EETTTEE
T ss_pred EecCCeE
Confidence 4444443
No 447
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=57.02 E-value=5.7 Score=40.37 Aligned_cols=34 Identities=41% Similarity=1.024 Sum_probs=25.9
Q ss_pred CCCCCccc--eeeecCCeeeecCCCCcEEecCCCceEecC
Q psy6572 499 CLDRPCSH--YCRNTLGSYSCSCAPGYALLSDKHGCKATS 536 (1416)
Q Consensus 499 C~~~~Csq--~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~~ 536 (1416)
|...+|.. .|++..++|.|.|++||. |..|...+
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~ 157 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVR 157 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCEEC
T ss_pred CcCCCCCCCCEEecCCCCceEeCCCCCc----CcccccCc
Confidence 33345543 799999999999999998 66787653
No 448
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=54.57 E-value=13 Score=47.00 Aligned_cols=74 Identities=26% Similarity=0.607 Sum_probs=46.5
Q ss_pred CCCCCCCc--ccccccCCCCCCcccc--cceecCCceEEeeCCCceecCCCCCccc---cCCcCCC---CCccc--eeee
Q psy6572 443 DNSDEFSC--FVNECNVSHGGQLCAH--ECIDLKIGYKCACRKGYQVHPEDKHLCV---DTNECLD---RPCSH--YCRN 510 (1416)
Q Consensus 443 dgsDe~~C--~i~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~~Gy~L~p~d~~tC~---didEC~~---~~Csq--~C~n 510 (1416)
.|.....| ++++|.... +.+|+. .|.+ ++|.|++||. |..|. ++++|.. .+|+. .|++
T Consensus 514 ~Gy~G~~Ce~~~~~C~~~~-~~~C~~~G~C~~----g~C~C~~Gy~-----G~~CeC~~~~~~C~~~~g~~C~~~G~C~~ 583 (690)
T 3fcs_B 514 GKITGKYCECDDFSCVRYK-GEMCSGHGQCSC----GDCLCDSDWT-----GYYCNCTTRTDTCMSSNGLLCSGRGKCEC 583 (690)
T ss_dssp CCCBSTTSCBCSSCCCBSS-SSBGGGSEEEET----TEEEECTTEE-----SSSSCEECCCTTTBCTTSSBTSSSCEEET
T ss_pred CCeeCCCcCcccCcCcCCC-CCCCCCCCEecC----CeeECcCCCc-----CCCCccCCCCCcccCCCCCCCCCCCEEeC
Confidence 33334455 456775321 123764 5655 8999999995 34565 5778863 56765 5655
Q ss_pred cCCeeeecC-CCCcEEecCCCceEe
Q psy6572 511 TLGSYSCSC-APGYALLSDKHGCKA 534 (1416)
Q Consensus 511 t~gsy~C~C-~~Gy~L~~dg~sC~a 534 (1416)
.+|.| .+||. |..|..
T Consensus 584 ----g~C~C~~~Gy~----G~~Ce~ 600 (690)
T 3fcs_B 584 ----GSCVCIQPGSY----GDTCEK 600 (690)
T ss_dssp ----TEEECCSTTCB----STTSCB
T ss_pred ----CEEECCCCCcc----CCCcCc
Confidence 38999 99997 556654
No 449
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=53.70 E-value=5.7 Score=32.80 Aligned_cols=29 Identities=34% Similarity=0.913 Sum_probs=21.2
Q ss_pred CCccc--eee--ecCCeeeecCCCCcEEecCCCceEe
Q psy6572 502 RPCSH--YCR--NTLGSYSCSCAPGYALLSDKHGCKA 534 (1416)
Q Consensus 502 ~~Csq--~C~--nt~gsy~C~C~~Gy~L~~dg~sC~a 534 (1416)
.+|.+ .|+ +..++|+|.|++||+ |..|..
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 44 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYI----GERCQY 44 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence 34443 566 567899999999997 667754
No 450
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=52.37 E-value=4.5 Score=41.82 Aligned_cols=31 Identities=32% Similarity=0.844 Sum_probs=22.8
Q ss_pred ccccccCCCCCCcccc--cceec-CCceEEeeCCCce
Q psy6572 451 FVNECNVSHGGQLCAH--ECIDL-KIGYKCACRKGYQ 484 (1416)
Q Consensus 451 ~i~eC~~~~~~~~Cs~--~C~nt-~~gy~C~C~~Gy~ 484 (1416)
++++|.. ... |++ .|+++ +++|+|.|++||.
T Consensus 130 ~~~~C~~-~~~--C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 130 DLNYCGT-HQP--CLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp ESCHHHH-TCC--CCTTCEEEECSTTCEEEECCTTCC
T ss_pred CCCCCCC-CCC--CCCCCEEcCCCCCCcEeECCCCCc
Confidence 3567753 112 764 79997 8999999999995
No 451
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=51.53 E-value=2.8e+02 Score=30.43 Aligned_cols=74 Identities=8% Similarity=-0.057 Sum_probs=43.0
Q ss_pred cccceeeeeecC-CCeEEEeeccCCCccEEEEecC-CCCeEEee----cCCCceEEEEccC-CcEEEeeCCCCeEEEeec
Q psy6572 566 QTNAVGLDFDWV-DNCLYWSDVTMHGSSIRRSCNN-SQPELLFP----ATSPDGLTVDWVG-RNLYWCDKGLDTIEVAKL 638 (1416)
Q Consensus 566 l~~~~~l~~D~~-~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~----l~~p~gLAvD~~~-~~LYwtD~~~~~I~v~~l 638 (1416)
...+.+|+|.+. .+.++.+-... +.|+...+. ...+.+.. ...+.+|++.+.. +.++.+-...+.|.+.++
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~D--~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSYD--RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEETT--SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred CccEEEEEeCCCCCCCEEEEEECC--CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 345667787542 23333333332 367777666 32222222 4567888888763 566677777788888877
Q ss_pred CCC
Q psy6572 639 DGR 641 (1416)
Q Consensus 639 dG~ 641 (1416)
.+.
T Consensus 135 ~~~ 137 (316)
T 3bg1_A 135 TGE 137 (316)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 452
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=51.27 E-value=10 Score=47.94 Aligned_cols=64 Identities=27% Similarity=0.729 Sum_probs=42.1
Q ss_pred ccccCCCCCCcccc--cceecCCceEEeeC----CCceecCCCCCccc-cCCcCCC---CCccc--eeeecCCeeeecCC
Q psy6572 453 NECNVSHGGQLCAH--ECIDLKIGYKCACR----KGYQVHPEDKHLCV-DTNECLD---RPCSH--YCRNTLGSYSCSCA 520 (1416)
Q Consensus 453 ~eC~~~~~~~~Cs~--~C~nt~~gy~C~C~----~Gy~L~p~d~~tC~-didEC~~---~~Csq--~C~nt~gsy~C~C~ 520 (1416)
++|...++..+|+. .|++ ++|.|+ +||. |..|+ ++++|.. .+|+. .|++ |+|.|.
T Consensus 484 ~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~-----G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~ 550 (690)
T 3fcs_B 484 DECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT-----GKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCD 550 (690)
T ss_dssp CCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB-----STTSCBCSSCCCBSSSSBGGGSEEEET----TEEEEC
T ss_pred CcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee-----CCCcCcccCcCcCCCCCCCCCCCEecC----CeeECc
Confidence 45643332233654 4552 689999 8984 55686 6778872 46864 6765 899999
Q ss_pred CCcEEecCCCceE
Q psy6572 521 PGYALLSDKHGCK 533 (1416)
Q Consensus 521 ~Gy~L~~dg~sC~ 533 (1416)
+||. |..|.
T Consensus 551 ~Gy~----G~~Ce 559 (690)
T 3fcs_B 551 SDWT----GYYCN 559 (690)
T ss_dssp TTEE----SSSSC
T ss_pred CCCc----CCCCc
Confidence 9997 44554
No 453
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=50.93 E-value=4.3e+02 Score=33.54 Aligned_cols=187 Identities=13% Similarity=0.020 Sum_probs=94.3
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEeecCC-CceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATS-PDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVL 646 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~-p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vL 646 (1416)
...+++++....+.|+-.......|++..-. ...+.+..+.. ...|++|+...+++|+- ..+.|++..=.|..-+.+
T Consensus 546 ~~~i~v~~~~~~~~~~~~~~~~~~v~~S~D~G~tW~~~~~l~~~~~~i~~d~~~~~~~y~g-~~g~v~~S~DgG~tW~~~ 624 (763)
T 3a0f_A 546 GGTIAVGADGKTFVWSPSKADGKGPYTSSDYGKTWTAPSGLSKQTTGIAADRVQANTFYVY-VEGDFFVSTDGGKSYTKK 624 (763)
T ss_dssp CCEEEECTTSSCEEEECSSCCSSCCEEESSTTSCCBCCBSCCCCCSCEEECSSSTTCEEEE-ETTEEEEESSTTSBCEEE
T ss_pred cceEEEecCCCcEEEEecccCCCceEEeCCCCCCCeecCCCCCCcceEEEeccCCCEEEEE-cCCCEEEEeCCCcCcccc
Confidence 3445556555554444331001256655433 33444433332 35789998776544443 346777765555544433
Q ss_pred EcCCCC----CcceeeecC-CcceEEEeeCCCCceEEEEecCCCCCEEEeecCCCC-C----e--eEEee-cCCCeEEEe
Q psy6572 647 INKGLQ----EPRGIALNP-AYGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSW-P----N--ALTIS-YETNELFWG 713 (1416)
Q Consensus 647 i~~~l~----~P~gIavDp-~~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~-P----~--gLaiD-~~~~rLYWt 713 (1416)
. ..+. .+.-|++.| ..+.||.+-.+ ..|++..-.|..-+.|. .+.. . . ++++. .....||.+
T Consensus 625 ~-~~lp~~~~~~~~i~~~~~~~~~l~~~~~~--~~l~~S~D~G~tW~~~~--~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 699 (763)
T 3a0f_A 625 G-NGLPCCWTYTGTPVTSNLRAGELWVSVKG--VGIYHSTDFGNTFTALA--GSGSSLNPAVFSIGAPQTPNATETLFLW 699 (763)
T ss_dssp C-BTSCCSSCCCEEEEECSSSTTCEEEEETT--TEEEEESSTTSBCEECT--TBTTTBEEEEEEEECCSSTTSSCEEEEE
T ss_pred c-cCCCcccCccccEEECCCCCCcEEEEcCC--CeEEEEcCCCCCceEcc--CCCcccccceeEEeeecCCCCCceEEEE
Confidence 2 2332 122278888 56788887633 26777665555544443 2211 1 1 22222 124567775
Q ss_pred c---C-CCCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEe---cCcEEEeecCCC
Q psy6572 714 D---A-HEDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVF---EDHLFWTDWEMK 765 (1416)
Q Consensus 714 D---~-~~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~---~d~LYwtD~~~~ 765 (1416)
- . ....|++..-.|..=+.+.... ..++.+..|++. .++||++..+.+
T Consensus 700 G~~~~~~~~gl~~S~D~G~tW~~~~~~~----~~~~~~~~i~~~p~~~~~v~~~T~GrG 754 (763)
T 3a0f_A 700 GIPSASQPEGLYMSTDNGGLWTRLNDDA----HNYGGATVISGDPRIYGRVYIGMNGRG 754 (763)
T ss_dssp EECSTTSCSEEEEESSTTSCCEECSCTT----CCTBCEEEEEECTTSTTEEEEEEBSSC
T ss_pred EEcccCCCcEEEEeCCCCCCcEeccCcc----ccCCCcceEEeCCCCCCEEEEeCCCCe
Confidence 3 1 2456777766666555443211 124455566664 346888765544
No 454
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=48.99 E-value=3.1e+02 Score=30.25 Aligned_cols=150 Identities=11% Similarity=0.030 Sum_probs=72.4
Q ss_pred cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cCCCceEEEEccCCcEEEeeCCCCeEEEeecCC
Q psy6572 568 NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 568 ~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG 640 (1416)
.+.+++|.+. ++.+-... +.|+...+. ...+.+.. ...+..|++.+.+. +..+-...+.|.+.++..
T Consensus 16 ~v~~~~~s~~---~las~~~D--~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 16 KIWSFDFSQG---ILATGSTD--RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp CEEEEEEETT---EEEEEESS--SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC--
T ss_pred ceeeeccCCC---EEEEEcCC--CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEccc
Confidence 3455666543 33332222 356666665 22222211 22456788877544 445555567777777642
Q ss_pred C------ce-EEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC--CCCCEEE--eecCCCCCeeEEeecCCCe
Q psy6572 641 R------FR-KVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD--GSNPKVI--ISKNLSWPNALTISYETNE 709 (1416)
Q Consensus 641 ~------~~-~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD--Gs~r~vl--v~~~l~~P~gLaiD~~~~r 709 (1416)
. .. ...+........+|++.|...+|+-..... .|..-+++ +...+.+ +...-.....|++.+...
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~--~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~- 166 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK--SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA- 166 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS--CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC--EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-
Confidence 1 11 112223344578899999866666554332 45555552 2222222 222334456788876444
Q ss_pred EEEecCCCCeEEEEeCC
Q psy6572 710 LFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 710 LYWtD~~~~~I~~~~ld 726 (1416)
++.+-...+.|...++.
T Consensus 167 ~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEEEEcCCCeEEEEECC
Confidence 44443344555555543
No 455
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.47 E-value=5e+02 Score=32.57 Aligned_cols=180 Identities=6% Similarity=-0.089 Sum_probs=88.3
Q ss_pred CCeEEEEecEEEEEEecCCcc-eEEec-ccccceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee------cC
Q psy6572 539 PPNLLFTNKYYIREVTQAGVM-TIRIH-NQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP------AT 609 (1416)
Q Consensus 539 ~~~li~s~~~~I~~i~l~g~~-~~~~~-~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~------l~ 609 (1416)
...|.++....|.+++..... ..... ....+..|.. ..+.|++.... .|+++... ...+.+.. ..
T Consensus 73 ~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~--~~g~lWigt~~----Gl~~~~~~~~~~~~~~~~~~~l~~~ 146 (758)
T 3ott_A 73 NTYLYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL--QGDTLWLGALN----GLYTYQLQSRKLTSFDTRRNGLPNN 146 (758)
T ss_dssp TTEEEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE--ETTEEEEEETT----EEEEEETTTCCEEEECHHHHCCSCS
T ss_pred CCcEEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe--cCCcEEEEcCC----cceeEeCCCCeEEEeccCCCCcCCC
Confidence 345666666667777654432 11100 0112333432 35666655322 57777766 33333311 23
Q ss_pred CCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcCC---C--CCcceeeecCCcceEEEeeCCCCceEEEEecCC
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINKG---L--QEPRGIALNPAYGYMYWTDWGQNAHIGKAKMDG 684 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~---l--~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG 684 (1416)
.+..|+.|. .++||+... +.|.+.+......+.+.... + ...+.|+.|...+.||+... ..|.+.+...
T Consensus 147 ~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~---~Gl~~~~~~~ 220 (758)
T 3ott_A 147 TIYSIIRTK-DNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE---GYLFQYFPST 220 (758)
T ss_dssp CEEEEEECT-TCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE---EEEEEEETTT
T ss_pred eEEEEEEcC-CCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC---CCCeEEcCCC
Confidence 355677774 567766543 35777766544322222111 1 12457888876666666542 2566666543
Q ss_pred CCCEEEeecCCCCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCceEEE
Q psy6572 685 SNPKVIISKNLSWPNALTISYETNELFWGDAHEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 685 s~r~vlv~~~l~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r~~v 733 (1416)
...+.+....-.....|+.|. .+.|+++- . +-|.+++......+.+
T Consensus 221 ~~~~~~~~l~~~~i~~i~~d~-~g~lWigT-~-~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 221 GQIKQTEAFHNNSIKSLALDG-NGDLLAGT-D-NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp TEEEEEEEEEEEEEEEEEECT-TCCEEEEE-T-TEEEEECCTTSCCEEE
T ss_pred CeEEeccCCCCCeEEEEEEcC-CCCEEEEe-C-CceeEEecCCCcEEEE
Confidence 322111110011235677773 67776664 2 4677777655444433
No 456
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=44.45 E-value=5.3e+02 Score=31.74 Aligned_cols=18 Identities=6% Similarity=0.062 Sum_probs=14.9
Q ss_pred CcceeeecCCcceEEEee
Q psy6572 653 EPRGIALNPAYGYMYWTD 670 (1416)
Q Consensus 653 ~P~gIavDp~~g~LYWtD 670 (1416)
...++|+||.+++||+..
T Consensus 394 ~w~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 394 NQGHDSYDPKRELFFMGI 411 (599)
T ss_dssp CSCBCEEETTTTEEEEEE
T ss_pred CCCCccCCCCCCEEEEec
Confidence 346899999999999964
No 457
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=44.18 E-value=3.1e+02 Score=33.62 Aligned_cols=127 Identities=17% Similarity=0.289 Sum_probs=74.3
Q ss_pred EEEecC-CCCeEEee---cCCCceEEEEccCCcE--EEe-eC-----------CCCeEEEeecCCCceEEEEcCCCCCcc
Q psy6572 594 RRSCNN-SQPELLFP---ATSPDGLTVDWVGRNL--YWC-DK-----------GLDTIEVAKLDGRFRKVLINKGLQEPR 655 (1416)
Q Consensus 594 ~r~~l~-s~~~~l~~---l~~p~gLAvD~~~~~L--Ywt-D~-----------~~~~I~v~~ldG~~~~vLi~~~l~~P~ 655 (1416)
..+.|+ ..+.+|+. -..-.-.|+||.+++| .|+ +. +.+.+.++++||.-+.-|+..
T Consensus 271 ~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G------ 344 (591)
T 2zux_A 271 GIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG------ 344 (591)
T ss_dssp EEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET------
T ss_pred eEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe------
Confidence 334455 34444443 2233356889988875 553 22 236899999998876555532
Q ss_pred eeeecCCcceEEEeeCCCCceEEEEecCCCC--CEEEe-ecCCCCCeeEE-eecCCCeEEEecCC---CCeEEEEeCC
Q psy6572 656 GIALNPAYGYMYWTDWGQNAHIGKAKMDGSN--PKVII-SKNLSWPNALT-ISYETNELFWGDAH---EDYIAVSDLN 726 (1416)
Q Consensus 656 gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~--r~vlv-~~~l~~P~gLa-iD~~~~rLYWtD~~---~~~I~~~~ld 726 (1416)
+.+||.....||-+-.+....+.+++||... .+++. .+.-..|.|.+ .|..+++|+|.-.. .++-..++++
T Consensus 345 s~~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Did 422 (591)
T 2zux_A 345 SMAVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADID 422 (591)
T ss_dssp TEEECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCC
T ss_pred eeEECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecC
Confidence 2478866444444445545678899998764 34443 33334455664 46678888887542 3455555544
No 458
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=44.06 E-value=3.5e+02 Score=29.53 Aligned_cols=170 Identities=11% Similarity=0.111 Sum_probs=88.2
Q ss_pred CCeEEEeecc----C---CCccEEEEecC-CCCeEEeecCCCc---eEEEEccCCcEEEeeCC-----CCeEEEeecCCC
Q psy6572 578 DNCLYWSDVT----M---HGSSIRRSCNN-SQPELLFPATSPD---GLTVDWVGRNLYWCDKG-----LDTIEVAKLDGR 641 (1416)
Q Consensus 578 ~~~LYwtD~~----~---~~~~I~r~~l~-s~~~~l~~l~~p~---gLAvD~~~~~LYwtD~~-----~~~I~v~~ldG~ 641 (1416)
+++||+.-.. . ....++++++. ...+.+..+..|+ ++++ ..++||+.-.. ...+++.++...
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6788887432 1 01246666665 3334443322222 2333 47899987431 356888887655
Q ss_pred ceEEEEcCCCCCcc---eeeecCCcceEEEeeCC----CCceEEEEecCCCCCEEEeecCCCCCe---eEEeecCCCeEE
Q psy6572 642 FRKVLINKGLQEPR---GIALNPAYGYMYWTDWG----QNAHIGKAKMDGSNPKVIISKNLSWPN---ALTISYETNELF 711 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~---gIavDp~~g~LYWtD~g----~~~~I~ra~mDGs~r~vlv~~~l~~P~---gLaiD~~~~rLY 711 (1416)
.-+.+. .+..|+ ++++ .+++||+.--. ....+++.++....-+.+ ..+..|+ ++++ .+++||
T Consensus 148 ~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~--~~~~iy 219 (308)
T 1zgk_A 148 EWHLVA--PMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI--TAMNTIRSGAGVCV--LHNCIY 219 (308)
T ss_dssp EEEECC--CCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEE--ETTEEE
T ss_pred eEeECC--CCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC--CCCCCccccceEEE--ECCEEE
Confidence 433332 233333 2333 25788887311 123577777654322222 1232232 3333 378999
Q ss_pred EecCC-----CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeec
Q psy6572 712 WGDAH-----EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDW 762 (1416)
Q Consensus 712 WtD~~-----~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~ 762 (1416)
+.-.. ...|++.++....-+.+... | .-..-.++++.+++||+.-.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p--~~r~~~~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETETWTFVAPM---K--HRRSALGITVHQGRIYVLGG 270 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEEECCCC---S--SCCBSCEEEEETTEEEEECC
T ss_pred EEeCCCCCCccceEEEEeCCCCcEEECCCC---C--CCccceEEEEECCEEEEEcC
Confidence 98643 35788888765544433211 1 01223467778899988754
No 459
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.05 E-value=4.2e+02 Score=29.51 Aligned_cols=176 Identities=11% Similarity=0.002 Sum_probs=84.3
Q ss_pred CCeEEEeeccCCCccEEEEecC---CCCeEEeecC-CCc-eEEEEccCCcEEEeeCC----------CCeEEEeecCCCc
Q psy6572 578 DNCLYWSDVTMHGSSIRRSCNN---SQPELLFPAT-SPD-GLTVDWVGRNLYWCDKG----------LDTIEVAKLDGRF 642 (1416)
Q Consensus 578 ~~~LYwtD~~~~~~~I~r~~l~---s~~~~l~~l~-~p~-gLAvD~~~~~LYwtD~~----------~~~I~v~~ldG~~ 642 (1416)
+++||+.-... ...++++++. ...+.+..+. .|+ +.++-.+.+.||+.-.. ...+++.++....
T Consensus 19 ~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 55666654322 2356666664 2233333333 232 12222247889986432 2467888776554
Q ss_pred eEEEEcCCCC-Ccc---eeeecCCcceEEEeeCCC--------------------------------------CceEEEE
Q psy6572 643 RKVLINKGLQ-EPR---GIALNPAYGYMYWTDWGQ--------------------------------------NAHIGKA 680 (1416)
Q Consensus 643 ~~vLi~~~l~-~P~---gIavDp~~g~LYWtD~g~--------------------------------------~~~I~ra 680 (1416)
-+.+.. +. .|+ ++++ ..++||+.--.. ...+++.
T Consensus 98 W~~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 98 WVKLMS--HAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp EEECSC--CCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred EEECCC--CCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 333322 22 333 1233 568899875211 1367777
Q ss_pred ecCCCCCEEEeecCCC-CC-eeEEeecCCCeEEEecC------CCCeEEEEeCCCC-ceEEEEeccCCCCcccccceeEE
Q psy6572 681 KMDGSNPKVIISKNLS-WP-NALTISYETNELFWGDA------HEDYIAVSDLNGE-NIKIIVSRRMDPTINLHHVFALA 751 (1416)
Q Consensus 681 ~mDGs~r~vlv~~~l~-~P-~gLaiD~~~~rLYWtD~------~~~~I~~~~ldG~-~r~~v~~~~~~p~~~l~~P~~la 751 (1416)
++....=+.+...... .- .++++ .+++||+.-. ....|+..+++-. +.-..+. .+ +.....+..+++
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~-~~-~~~~~~~~~~~~ 249 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA-PV-SSPDGVAGGFAG 249 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEEEECC---CEEEECC-CS-STTTCCBSCEEE
T ss_pred eCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC-CC-CCCcccccceEE
Confidence 7654433333221111 11 23444 4789999843 2456777776322 2222221 11 000011223477
Q ss_pred EecCcEEEeec
Q psy6572 752 VFEDHLFWTDW 762 (1416)
Q Consensus 752 v~~d~LYwtD~ 762 (1416)
+.+++||+.-.
T Consensus 250 ~~~~~iyv~GG 260 (357)
T 2uvk_A 250 ISNDSLIFAGG 260 (357)
T ss_dssp EETTEEEEECC
T ss_pred EECCEEEEEcC
Confidence 88999998754
No 460
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=41.00 E-value=12 Score=44.68 Aligned_cols=55 Identities=27% Similarity=0.796 Sum_probs=35.8
Q ss_pred cceecCCceEEeeCCCceecCCCCCcccc-C----------CcCC-CCCccc--eeeecCCeeeecCCCCcEEecCCCce
Q psy6572 467 ECIDLKIGYKCACRKGYQVHPEDKHLCVD-T----------NECL-DRPCSH--YCRNTLGSYSCSCAPGYALLSDKHGC 532 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p~d~~tC~d-i----------dEC~-~~~Csq--~C~nt~gsy~C~C~~Gy~L~~dg~sC 532 (1416)
.|.+ ..++|.|++||. |..|.. . ++|. .++|.+ .| ..++|+|.|++||. |..|
T Consensus 210 ~C~~--~~g~C~C~~G~~-----G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C--~~~~~~C~C~~G~~----G~~C 276 (423)
T 2gy5_A 210 VCHE--DTGECICPPGFM-----GRTCEKACELHTFGRTCKERCSGQEGCKSYVFC--LPDPYGCSCATGWK----GLQC 276 (423)
T ss_dssp EECT--TTCCEECCTTEE-----STTSCEECCTTEESTTSCEECCSTTTTTTCCEE--ETTTTEEECCBTCB----SGGG
T ss_pred EEEC--CCCcEeCCCCcc-----CCCcccccCCCCCCCCcCccCCCCCCCCCCCEE--CCCCCeEEeCCCcc----cccc
Confidence 3544 568999999995 335653 1 2444 455654 44 35789999999997 5556
Q ss_pred Ee
Q psy6572 533 KA 534 (1416)
Q Consensus 533 ~a 534 (1416)
..
T Consensus 277 ~~ 278 (423)
T 2gy5_A 277 NE 278 (423)
T ss_dssp CB
T ss_pred cC
Confidence 43
No 461
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=40.86 E-value=15 Score=37.26 Aligned_cols=29 Identities=28% Similarity=0.638 Sum_probs=20.6
Q ss_pred cceecCCceEEeeCCCceecCCCCCccccCCcCC
Q psy6572 467 ECIDLKIGYKCACRKGYQVHPEDKHLCVDTNECL 500 (1416)
Q Consensus 467 ~C~nt~~gy~C~C~~Gy~L~p~d~~tC~didEC~ 500 (1416)
.|+++.++|.|.|.+||. +..|+.+.+|.
T Consensus 132 ~C~~~~~~~~c~C~~g~~-----g~~C~~~~~c~ 160 (164)
T 3cfw_A 132 ECVEIINNYTCNCDVGYY-----GPQCQFVQVDP 160 (164)
T ss_dssp EEEEETTEEEEEECTTCB-----SSSSCBC----
T ss_pred eecccCCCceeeeCCCcc-----cccccccccCc
Confidence 688888899999999984 45788887774
No 462
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=40.39 E-value=13 Score=45.95 Aligned_cols=36 Identities=36% Similarity=0.950 Sum_probs=30.1
Q ss_pred CCcCCCCCccc--eeee-cCCeeeecCC-CCcEEecCCCceEec
Q psy6572 496 TNECLDRPCSH--YCRN-TLGSYSCSCA-PGYALLSDKHGCKAT 535 (1416)
Q Consensus 496 idEC~~~~Csq--~C~n-t~gsy~C~C~-~Gy~L~~dg~sC~a~ 535 (1416)
+|+|...||.+ .|++ ..++|+|.|+ +||. |++|...
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCCC
Confidence 56788788876 7999 8899999999 9998 7788653
No 463
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=40.15 E-value=5.6e+02 Score=30.78 Aligned_cols=155 Identities=7% Similarity=-0.150 Sum_probs=74.7
Q ss_pred cccceeeeeecC-----CCeEEEeeccCCCccEEEEecC-CCCe------------EEee-cCCCceEEEEccCCcEEEe
Q psy6572 566 QTNAVGLDFDWV-----DNCLYWSDVTMHGSSIRRSCNN-SQPE------------LLFP-ATSPDGLTVDWVGRNLYWC 626 (1416)
Q Consensus 566 l~~~~~l~~D~~-----~~~LYwtD~~~~~~~I~r~~l~-s~~~------------~l~~-l~~p~gLAvD~~~~~LYwt 626 (1416)
...+..|+|.+. .+.+..+-... +.|+...+. .... ++.. -..+. +|+|....+..+
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~D--gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~--sv~~s~~~~las 282 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQE--GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT--TFDFLSPTTVVC 282 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETT--SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE--EEEESSSSEEEE
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecC--CeEEEEEcCCCccccccceeecCceEEEEcCCCCEE--EEEecCCCeEEE
Confidence 345677888775 12333333332 367666665 2110 1111 12333 444444455667
Q ss_pred eCCCCeEEEeecCC-CceEEEEcCCCCCcceee-ecCCcc-eEEEeeCCCCceEEEEecCC-CCCEEEee-cCCCCCeeE
Q psy6572 627 DKGLDTIEVAKLDG-RFRKVLINKGLQEPRGIA-LNPAYG-YMYWTDWGQNAHIGKAKMDG-SNPKVIIS-KNLSWPNAL 701 (1416)
Q Consensus 627 D~~~~~I~v~~ldG-~~~~vLi~~~l~~P~gIa-vDp~~g-~LYWtD~g~~~~I~ra~mDG-s~r~vlv~-~~l~~P~gL 701 (1416)
-...++|.+.++.. ......+.......++|+ .-+..| .++.|-... ..|..-++.. ....++.. ........|
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-GYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-SEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-CeEEEEECCCCCcccccccccccCcccce
Confidence 67778999988873 332222223334566774 234444 555554222 2454445432 21222221 111234568
Q ss_pred EeecCCCeEEEecCCCCeEEEEeCC
Q psy6572 702 TISYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 702 aiD~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
++.+. +.++.+-...+.|...++.
T Consensus 362 ~fsp~-~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 362 VYCPQ-IYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp EEETT-TTEEEEECSSSEEEEEETT
T ss_pred EeCCC-cCeEEEeCCCCcEEEEECc
Confidence 88753 4445554445567666654
No 464
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=39.93 E-value=6e+02 Score=31.04 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=13.5
Q ss_pred ceeeecCCcceEEEee
Q psy6572 655 RGIALNPAYGYMYWTD 670 (1416)
Q Consensus 655 ~gIavDp~~g~LYWtD 670 (1416)
.++|+||.+++||+..
T Consensus 415 ~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPA 430 (582)
T ss_dssp SCCEECTTTCCEEEEE
T ss_pred CCceECCCCCEEEEec
Confidence 3689999999999864
No 465
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=39.19 E-value=1.6e+02 Score=37.35 Aligned_cols=122 Identities=13% Similarity=0.071 Sum_probs=71.1
Q ss_pred CCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEEEEcC-C-----CCCcceeeecCC-cceEEEeeC------CC-Cc
Q psy6572 610 SPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKVLINK-G-----LQEPRGIALNPA-YGYMYWTDW------GQ-NA 675 (1416)
Q Consensus 610 ~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~-~-----l~~P~gIavDp~-~g~LYWtD~------g~-~~ 675 (1416)
.+.+|+|++....+.|+-...+.|++..-.|..-+.|... . .....+|++||. .+.||++-. +. ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 6788999988755445544456788887667654444321 1 223568999995 468887641 11 24
Q ss_pred eEEEEecCCCCCEEEeec-CCC--C-----CeeEEeecCC-CeEEEecCCCCeEEEEeCCCCceE
Q psy6572 676 HIGKAKMDGSNPKVIISK-NLS--W-----PNALTISYET-NELFWGDAHEDYIAVSDLNGENIK 731 (1416)
Q Consensus 676 ~I~ra~mDGs~r~vlv~~-~l~--~-----P~gLaiD~~~-~rLYWtD~~~~~I~~~~ldG~~r~ 731 (1416)
.|+|..=.|..=+.+... .+. . ...|+||+.+ ++||........|++..-.|..-+
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~ 168 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWS 168 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCE
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCccee
Confidence 677776556554444321 110 1 2579999875 567765422245666554454433
No 466
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=39.12 E-value=2.3e+02 Score=33.07 Aligned_cols=36 Identities=22% Similarity=0.739 Sum_probs=27.5
Q ss_pred CCcCCCCCccc--eeeecCCeeeecCCC-CcEEecCCCceEec
Q psy6572 496 TNECLDRPCSH--YCRNTLGSYSCSCAP-GYALLSDKHGCKAT 535 (1416)
Q Consensus 496 idEC~~~~Csq--~C~nt~gsy~C~C~~-Gy~L~~dg~sC~a~ 535 (1416)
.++|...+|.+ .|++..++|.|.|+. ||. |..|...
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~~ 223 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCNDP 223 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEE----STTSCEE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCccc----CCCCCCC
Confidence 35566667765 789999999999995 996 6778653
No 467
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=32.45 E-value=20 Score=44.53 Aligned_cols=36 Identities=28% Similarity=0.907 Sum_probs=28.9
Q ss_pred CCcCCCCCccc--eeee-cCCeeeecCC-CCcEEecCCCceEec
Q psy6572 496 TNECLDRPCSH--YCRN-TLGSYSCSCA-PGYALLSDKHGCKAT 535 (1416)
Q Consensus 496 idEC~~~~Csq--~C~n-t~gsy~C~C~-~Gy~L~~dg~sC~a~ 535 (1416)
+++|...||.+ .|++ ..++|.|.|+ +||. |+.|...
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~~ 40 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTTP 40 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCEE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCCc
Confidence 46788788876 7996 4589999999 9997 7788653
No 468
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=31.56 E-value=6.1e+02 Score=28.63 Aligned_cols=74 Identities=7% Similarity=-0.094 Sum_probs=44.1
Q ss_pred CCCceEEEEc-------cCCcEEEeeCCCCeEEEeecCCCceEEEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEe
Q psy6572 609 TSPDGLTVDW-------VGRNLYWCDKGLDTIEVAKLDGRFRKVLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAK 681 (1416)
Q Consensus 609 ~~p~gLAvD~-------~~~~LYwtD~~~~~I~v~~ldG~~~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~ 681 (1416)
..+.+|++.+ ..+++..+-+..++|.+-++........+...-..+.+++..|..+.++.+-.. ...|...+
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-d~~v~~wd 215 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER-NGNIRIFD 215 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET-TSEEEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC-CCEEEEEE
Confidence 3466777765 246777777778888888875443322222334457789999987655554322 22454444
Q ss_pred cC
Q psy6572 682 MD 683 (1416)
Q Consensus 682 mD 683 (1416)
+.
T Consensus 216 ~~ 217 (393)
T 4gq1_A 216 WT 217 (393)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 469
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=31.10 E-value=5.8e+02 Score=28.24 Aligned_cols=105 Identities=11% Similarity=-0.002 Sum_probs=52.0
Q ss_pred cceeeecCCcceEEEeeCCCCceEEEEecCC-CCCEEEeec-CC-CCCeeEEeecCCCeEEEecCCCCeEEEEeCCCCce
Q psy6572 654 PRGIALNPAYGYMYWTDWGQNAHIGKAKMDG-SNPKVIISK-NL-SWPNALTISYETNELFWGDAHEDYIAVSDLNGENI 730 (1416)
Q Consensus 654 P~gIavDp~~g~LYWtD~g~~~~I~ra~mDG-s~r~vlv~~-~l-~~P~gLaiD~~~~rLYWtD~~~~~I~~~~ldG~~r 730 (1416)
..+|++++ +.+|.+ +....|++ ..|| ..=+.+... .+ ..+.+|++. ..+++|.+-. .+.|++..-.|..-
T Consensus 82 ~~~i~~~~--~~~~~~--g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~-~g~v~~S~DgG~tW 154 (327)
T 2xbg_A 82 FNSVSFQG--NEGWIV--GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKAL-GNGSAEMITN-VGAIYRTKDSGKNW 154 (327)
T ss_dssp EEEEEEET--TEEEEE--EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEE-ETTEEEEEET-TCCEEEESSTTSSE
T ss_pred EEEEEecC--CeEEEE--ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEE-CCCCEEEEeC-CccEEEEcCCCCCC
Confidence 46788876 456554 22346776 4454 433332221 12 235566654 3567776653 45676655445555
Q ss_pred EEEEeccCCCCcccccceeEEEecCcEEEeecCCCeeEEec
Q psy6572 731 KIIVSRRMDPTINLHHVFALAVFEDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 731 ~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~~~~~I~~~n 771 (1416)
+.+.... ....++|++..+..+|.-...+.|++..
T Consensus 155 ~~~~~~~------~~~~~~~~~~~~~~~~~~g~~G~~~~S~ 189 (327)
T 2xbg_A 155 QALVQEA------IGVMRNLNRSPSGEYVAVSSRGSFYSTW 189 (327)
T ss_dssp EEEECSC------CCCEEEEEECTTSCEEEEETTSSEEEEE
T ss_pred EEeecCC------CcceEEEEEcCCCcEEEEECCCcEEEEe
Confidence 5443321 2234566664333333333345555543
No 470
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=29.77 E-value=5.8e+02 Score=27.78 Aligned_cols=127 Identities=12% Similarity=-0.080 Sum_probs=65.2
Q ss_pred CCeEEEeeccC------CCccEEEEecC-CCCeEEeecCCCc---eEEEEccCCcEEEeeCC------CCeEEEeecCCC
Q psy6572 578 DNCLYWSDVTM------HGSSIRRSCNN-SQPELLFPATSPD---GLTVDWVGRNLYWCDKG------LDTIEVAKLDGR 641 (1416)
Q Consensus 578 ~~~LYwtD~~~------~~~~I~r~~l~-s~~~~l~~l~~p~---gLAvD~~~~~LYwtD~~------~~~I~v~~ldG~ 641 (1416)
+++||+.-... ....+.++++. ...+.+..+..|+ ++++ .+++||+.-.. .+.+++.++...
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 67888874421 11356777766 3344444332222 2333 67889987543 257888887755
Q ss_pred ceEEEEcCCCCCcc---eeeecCCcceEEEeeCC----CCceEEEEecCCCCCEEEeecCCCCCe---eEEeecCCCeEE
Q psy6572 642 FRKVLINKGLQEPR---GIALNPAYGYMYWTDWG----QNAHIGKAKMDGSNPKVIISKNLSWPN---ALTISYETNELF 711 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~---gIavDp~~g~LYWtD~g----~~~~I~ra~mDGs~r~vlv~~~l~~P~---gLaiD~~~~rLY 711 (1416)
.-+.+. .+..|+ ++++ ..++||+.--. ....|++.++....=+.+. .+..|+ ++++ .+++||
T Consensus 176 ~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~l~ 247 (315)
T 4asc_A 176 EWKELA--PMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE--AFPQERSSLSLVS--LVGTLY 247 (315)
T ss_dssp EEEECC--CCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC--CCSSCCBSCEEEE--ETTEEE
T ss_pred eEEECC--CCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECC--CCCCcccceeEEE--ECCEEE
Confidence 433332 333343 2222 35788887411 1135667666543222222 233332 2333 377888
Q ss_pred Eec
Q psy6572 712 WGD 714 (1416)
Q Consensus 712 WtD 714 (1416)
+.-
T Consensus 248 v~G 250 (315)
T 4asc_A 248 AIG 250 (315)
T ss_dssp EEE
T ss_pred EEC
Confidence 874
No 471
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=29.71 E-value=9.3e+02 Score=30.19 Aligned_cols=133 Identities=13% Similarity=0.013 Sum_probs=67.3
Q ss_pred eeeeeecCCC-eEEEeeccC---CCccEEEEecC-CCCeEEeecCCC-ceEEEEccCC-cEEEeeCCCCeEEEeecCCCc
Q psy6572 570 VGLDFDWVDN-CLYWSDVTM---HGSSIRRSCNN-SQPELLFPATSP-DGLTVDWVGR-NLYWCDKGLDTIEVAKLDGRF 642 (1416)
Q Consensus 570 ~~l~~D~~~~-~LYwtD~~~---~~~~I~r~~l~-s~~~~l~~l~~p-~gLAvD~~~~-~LYwtD~~~~~I~v~~ldG~~ 642 (1416)
.+|++|+.+. +||++-... ..+.|+|..-. ...+.+..-..| ..|++++... .||+.. ..+.|++..=.|..
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~S~DgG~T 171 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWVSKNFGGK 171 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEEESSTTSS
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCceEEEEecCCCCEEEEEE-CCCCEEEEeCCCCC
Confidence 4788888654 788875421 12467766544 344443321223 3799998654 456553 34677776655655
Q ss_pred eEEEEcCCCCCcceeeecCCcceEEEeeCCC--------CceEEEEecCCCCCEEEeecCCCCCeeEEeecCCCeEEEec
Q psy6572 643 RKVLINKGLQEPRGIALNPAYGYMYWTDWGQ--------NAHIGKAKMDGSNPKVIISKNLSWPNALTISYETNELFWGD 714 (1416)
Q Consensus 643 ~~vLi~~~l~~P~gIavDp~~g~LYWtD~g~--------~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD~~~~rLYWtD 714 (1416)
-+.|. ..+. ...... ...|||.-... .-.|.+..--|...++|.. ...++++ ..+.||++-
T Consensus 172 W~~i~-~~v~---~~~f~~-~~~Iy~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~~----~i~~f~~--~~~yl~va~ 240 (685)
T 3f6k_A 172 WEEIH-KAVC---LAKWGS-DNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGV----KIYSFGL--GGRFLFASV 240 (685)
T ss_dssp EEEEE-SSEE---EEEECS-TTCEEEEECSSSCTTTTTTSEEEEEESSTTSSCEEEEE----EEEEEEE--ETTEEEEEE
T ss_pred cEEee-cCcc---ccccCC-CCeEEEEeeccccccCCCCceEEEEecCCCCCceEeec----cceeeee--eeeEEEEEE
Confidence 44443 2221 112222 24677764221 1133343333444444443 1235555 467787764
No 472
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=29.28 E-value=9.2e+02 Score=29.99 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=12.2
Q ss_pred eEEeecCCCeEEEecC
Q psy6572 700 ALTISYETNELFWGDA 715 (1416)
Q Consensus 700 gLaiD~~~~rLYWtD~ 715 (1416)
.+++|+..++||+.-.
T Consensus 239 ~~~~d~~~~~vy~~~~ 254 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVG 254 (689)
T ss_dssp CEEEETTTTEEEEECC
T ss_pred ceeEcCCCCEEEEeCC
Confidence 5788888888888653
No 473
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.67 E-value=9.7e+02 Score=30.09 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=65.7
Q ss_pred cCCCceEE-EEccCCcEEEee----------CCCCeEEEeecCCC--------ceEEEE-cCCCCCcceeeecCCcceEE
Q psy6572 608 ATSPDGLT-VDWVGRNLYWCD----------KGLDTIEVAKLDGR--------FRKVLI-NKGLQEPRGIALNPAYGYMY 667 (1416)
Q Consensus 608 l~~p~gLA-vD~~~~~LYwtD----------~~~~~I~v~~ldG~--------~~~vLi-~~~l~~P~gIavDp~~g~LY 667 (1416)
+..|.... ++...+.||+.- ..+++|.++++++. ..++|+ ...-..+.++++.. ++||
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~ 363 (711)
T 4hvt_A 286 INMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--DRVF 363 (711)
T ss_dssp CCSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS--SCEE
T ss_pred eecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC--CEEE
Confidence 33444433 466788888832 14568999988652 234444 33334456676654 4666
Q ss_pred EeeC-CCCceEEEEecCCC--CCEE-EeecCCCCCeeEEeecCCCeEEEecC---CCCeEEEEeCCCCceEEE
Q psy6572 668 WTDW-GQNAHIGKAKMDGS--NPKV-IISKNLSWPNALTISYETNELFWGDA---HEDYIAVSDLNGENIKII 733 (1416)
Q Consensus 668 WtD~-g~~~~I~ra~mDGs--~r~v-lv~~~l~~P~gLaiD~~~~rLYWtD~---~~~~I~~~~ldG~~r~~v 733 (1416)
++-. ....+|.+.++.+. ..+. |.......-.++.++...+.|+++-. .-..|+.+++. ...+.+
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l 435 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKII 435 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEE
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEE
Confidence 6542 33457888887543 2233 22211222334455555566665532 33578888877 334433
No 474
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=28.11 E-value=34 Score=39.51 Aligned_cols=35 Identities=43% Similarity=1.081 Sum_probs=31.0
Q ss_pred CCCccceeeecCCeeeecCCCCcEEecCCCceEec
Q psy6572 501 DRPCSHYCRNTLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 501 ~~~Csq~C~nt~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
...|++.|.+..|+|.|.|..||.|..+.++|...
T Consensus 131 ~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~~ 165 (361)
T 4aqb_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (361)
T ss_dssp SSCCSSEEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred CCCCCccCCccCCCceeccCCCeEEeccccccccc
Confidence 46789999999999999999999999998887654
No 475
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=27.52 E-value=6.1e+02 Score=27.34 Aligned_cols=133 Identities=10% Similarity=0.026 Sum_probs=70.9
Q ss_pred cCCcEEEeeC----CCCeEEEeecCCCceEEEEcCCCCCcce-eeecCCcceEEEeeC-----CCCceEEEEecCCCCCE
Q psy6572 619 VGRNLYWCDK----GLDTIEVAKLDGRFRKVLINKGLQEPRG-IALNPAYGYMYWTDW-----GQNAHIGKAKMDGSNPK 688 (1416)
Q Consensus 619 ~~~~LYwtD~----~~~~I~v~~ldG~~~~vLi~~~l~~P~g-IavDp~~g~LYWtD~-----g~~~~I~ra~mDGs~r~ 688 (1416)
.++.||+.-. ....+++.++....-+.+.. +..|+. .++-...++||+.-- .....+++.++....-+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG--PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC--CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC--CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 4778888754 23678888877654444432 323321 111123578888641 11245777776544322
Q ss_pred EEeecCCCCCe---eEEeecCCCeEEEecCC---------CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCc
Q psy6572 689 VIISKNLSWPN---ALTISYETNELFWGDAH---------EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDH 756 (1416)
Q Consensus 689 vlv~~~l~~P~---gLaiD~~~~rLYWtD~~---------~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~ 756 (1416)
.+ ..+..|+ ++++ .+++||+.-.. .+.|++.++....-+.+... | .-..-.++++.+++
T Consensus 132 ~~--~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p--~~r~~~~~~~~~~~ 202 (306)
T 3ii7_A 132 TK--PSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM---I--EARKNHGLVFVKDK 202 (306)
T ss_dssp EE--CCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC---S--SCCBSCEEEEETTE
T ss_pred eC--CCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc---c--chhhcceEEEECCE
Confidence 32 2232222 3333 37899998531 56688888765544444221 1 01223466777899
Q ss_pred EEEeec
Q psy6572 757 LFWTDW 762 (1416)
Q Consensus 757 LYwtD~ 762 (1416)
||+.-.
T Consensus 203 i~v~GG 208 (306)
T 3ii7_A 203 IFAVGG 208 (306)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 988743
No 476
>1b1v_A PSP1, protein (plasmatocyte-spreading peptide); insect cytokine, EGF-like; NMR {Synthetic} SCOP: j.8.1.1 PDB: 1b5n_A 1bqf_A 2eqh_A 2dj9_A 1hrl_A 1v28_A 2djc_A 1irr_A
Probab=27.40 E-value=32 Score=23.30 Aligned_cols=17 Identities=24% Similarity=0.567 Sum_probs=14.1
Q ss_pred ecCCCceeccCCCCccceeec
Q psy6572 1315 HCAEGYHMVHGKNKTSSCVAN 1335 (1416)
Q Consensus 1315 ~C~~gy~~~~~~~~~~~Cka~ 1335 (1416)
.|.+||++.+|+ .||++
T Consensus 6 gc~~gy~rtadg----rckpt 22 (26)
T 1b1v_A 6 GCLAGYMRTADG----RCKPT 22 (26)
T ss_dssp SCSSSCEECSSC----CEECC
T ss_pred cccccceECCCC----ccccc
Confidence 489999999995 59874
No 477
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=26.71 E-value=23 Score=29.06 Aligned_cols=13 Identities=31% Similarity=0.968 Sum_probs=11.7
Q ss_pred CCCeEEecCCCce
Q psy6572 1309 ERTFSCHCAEGYH 1321 (1416)
Q Consensus 1309 ~gs~~C~C~~gy~ 1321 (1416)
.++|.|.|.+||.
T Consensus 26 ~~~~~C~C~~Gyt 38 (53)
T 1nql_B 26 LDKYACNCVVGYI 38 (53)
T ss_dssp TTEEEEEECTTEE
T ss_pred CCCEEEecCCCCc
Confidence 3899999999997
No 478
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=26.71 E-value=9.7e+02 Score=29.51 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=71.7
Q ss_pred EEEecC-CCCeEEee---cCCCceEEEEccCCcE--EEe-eC-----------CCCeEEEeecCCCceEEEEcCCCCCcc
Q psy6572 594 RRSCNN-SQPELLFP---ATSPDGLTVDWVGRNL--YWC-DK-----------GLDTIEVAKLDGRFRKVLINKGLQEPR 655 (1416)
Q Consensus 594 ~r~~l~-s~~~~l~~---l~~p~gLAvD~~~~~L--Ywt-D~-----------~~~~I~v~~ldG~~~~vLi~~~l~~P~ 655 (1416)
..+.|+ ..+.+++. -..-.-.|+||.+++| .|. +. +.+.+.++++||.-+.-|+...
T Consensus 275 ~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs----- 349 (620)
T 2zuy_A 275 GTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA----- 349 (620)
T ss_dssp EEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT-----
T ss_pred eEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee-----
Confidence 344555 33444443 1222234788888754 443 32 1257999999987765555332
Q ss_pred eeeecCCcceEEEeeCCCCceEEEEecCCCC--CEEEe-ecCCCCCeeEE-eecCCCeEEEecCC---CCeEEEEeCC
Q psy6572 656 GIALNPAYGYMYWTDWGQNAHIGKAKMDGSN--PKVII-SKNLSWPNALT-ISYETNELFWGDAH---EDYIAVSDLN 726 (1416)
Q Consensus 656 gIavDp~~g~LYWtD~g~~~~I~ra~mDGs~--r~vlv-~~~l~~P~gLa-iD~~~~rLYWtD~~---~~~I~~~~ld 726 (1416)
.+||.....||-+..+....+...++|... .+++. .+.-..|.|++ .|..+++|+|.-.. .++-..++++
T Consensus 350 -~~iD~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~~~D~Gr~~~~Did 426 (620)
T 2zuy_A 350 -MAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHAGTDVGRGMAAHID 426 (620)
T ss_dssp -EEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCEEEEECCC
T ss_pred -eEECCCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEecCcccCCceEEEecC
Confidence 578866445555555445678888888763 34433 33333455664 47778888887532 3444445543
No 479
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=25.95 E-value=1e+03 Score=29.32 Aligned_cols=183 Identities=5% Similarity=-0.008 Sum_probs=0.0
Q ss_pred ceEecCCCCCeEEEEecEEEEEEecCCcc-eEEecccc----cceeeeeecCCCeEEEeeccCCCccEEEEecC-CCC--
Q psy6572 531 GCKATSDVPPNLLFTNKYYIREVTQAGVM-TIRIHNQT----NAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQP-- 602 (1416)
Q Consensus 531 sC~a~~~~~~~li~s~~~~I~~i~l~g~~-~~~~~~l~----~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~-- 602 (1416)
.+.-......+...+....++..+..+.. .+. +... .+.+|+|.+.++.|+..... +.|....+. ...
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D---GtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED---GELQFFSIRKNSENT 165 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT---SEEEEEECCCCTTTC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC---CEEEEEECCCCcccc
Q ss_pred ------eEE----ee-cCCCceEEEEccCCcEEEeeCCCCeEEEeecCCCceEE----EEcCCCCCcceeeecCCcceEE
Q psy6572 603 ------ELL----FP-ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLDGRFRKV----LINKGLQEPRGIALNPAYGYMY 667 (1416)
Q Consensus 603 ------~~l----~~-l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ldG~~~~v----Li~~~l~~P~gIavDp~~g~LY 667 (1416)
.++ .. ...+..||+-+.+ +.+-...+.|.+.++++..... |....-....+|+.. .++|-
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LA 240 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVV 240 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEE
Q ss_pred EeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEe-ecCCCeEEEecCCCCeEEEEeCC
Q psy6572 668 WTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTI-SYETNELFWGDAHEDYIAVSDLN 726 (1416)
Q Consensus 668 WtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLai-D~~~~rLYWtD~~~~~I~~~~ld 726 (1416)
-+-.+ .|..-++.+....++.........+|++ |.+++.+..+-...+. ....++
T Consensus 241 Sa~~~---tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 241 LTCPG---YVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EECSS---EEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEeCC---eEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
No 480
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=25.90 E-value=6.5e+02 Score=27.11 Aligned_cols=173 Identities=12% Similarity=0.024 Sum_probs=90.1
Q ss_pred CCCeEEEeeccC--CCccEEEEecC-CCCeEEeecCCCc-eEEEEccCCcEEEeeCC------CCeEEEeecCCCceEEE
Q psy6572 577 VDNCLYWSDVTM--HGSSIRRSCNN-SQPELLFPATSPD-GLTVDWVGRNLYWCDKG------LDTIEVAKLDGRFRKVL 646 (1416)
Q Consensus 577 ~~~~LYwtD~~~--~~~~I~r~~l~-s~~~~l~~l~~p~-gLAvD~~~~~LYwtD~~------~~~I~v~~ldG~~~~vL 646 (1416)
.+++||+.-... .-..+.++++. ...+.+..+..|+ +.++-..+++||+.-.. ...+++.++....-+.+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 367788774421 11356677666 3344444432222 12222347889986432 35788888876544444
Q ss_pred EcCCCCCcc---eeeecCCcceEEEeeC----CC----CceEEEEecCCCCCEEEeecCCCCCe---eEEeecCCCeEEE
Q psy6572 647 INKGLQEPR---GIALNPAYGYMYWTDW----GQ----NAHIGKAKMDGSNPKVIISKNLSWPN---ALTISYETNELFW 712 (1416)
Q Consensus 647 i~~~l~~P~---gIavDp~~g~LYWtD~----g~----~~~I~ra~mDGs~r~vlv~~~l~~P~---gLaiD~~~~rLYW 712 (1416)
..+..|+ ++++ ..++||+.-- .. ...+++.++....-+.+. .+..|+ ++++ .+++||+
T Consensus 134 --~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~i~v 205 (306)
T 3ii7_A 134 --PSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC--PMIEARKNHGLVF--VKDKIFA 205 (306)
T ss_dssp --CCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC--CCSSCCBSCEEEE--ETTEEEE
T ss_pred --CCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC--CccchhhcceEEE--ECCEEEE
Confidence 2333333 2222 3678888741 11 235777776544322322 232232 3333 3789999
Q ss_pred ecCC-----CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeec
Q psy6572 713 GDAH-----EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDW 762 (1416)
Q Consensus 713 tD~~-----~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~ 762 (1416)
.-.. ...|+..++....-+.+... | .-..-.++++.+++||+.-.
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p--~~r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNEWKMVSPM---P--WKGVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTEEEECCCC---S--CCBSCCEEEEETTEEEEEEC
T ss_pred EeCCCCCCCCceEEEeeCCCCcEEECCCC---C--CCccceeEEEECCEEEEEeC
Confidence 8432 35678887765443333211 1 01223467778999998765
No 481
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=25.67 E-value=2e+02 Score=32.45 Aligned_cols=56 Identities=18% Similarity=0.105 Sum_probs=33.8
Q ss_pred CCCeEEEecCCCCeEEEEeCCCCceEEEEeccCCCCc-ccccceeEEEecCcEEEeec
Q psy6572 706 ETNELFWGDAHEDYIAVSDLNGENIKIIVSRRMDPTI-NLHHVFALAVFEDHLFWTDW 762 (1416)
Q Consensus 706 ~~~rLYWtD~~~~~I~~~~ldG~~r~~v~~~~~~p~~-~l~~P~~lav~~d~LYwtD~ 762 (1416)
++++||-.|-+++.|+.+.-+..-..+|+..+ +... .--..--++|.++.||+-..
T Consensus 103 FngkLyt~DDRTGiVyei~~~~~iPwvIL~dG-dG~~~kGfK~EWaTVKd~~LyVGs~ 159 (331)
T 1s1d_A 103 FNGKLYSVDDRTGVVYQIEGSKAVPWVILSDG-DGTVEKGFKAEWLAVKDERLYVGGL 159 (331)
T ss_dssp ETTEEEEEETTTCEEEEEETTEEEEEEECEET-TTTEEEECCCCEEEEETTEEEEECC
T ss_pred ECCEEeeeeCCCceEEEEeCCcEEEEEEEecC-CCCcCcccceeeEEEECCEEEEeec
Confidence 68999999999999999862222223343322 1110 01122357888999998643
No 482
>2eqq_A GBP, growth-blocking peptide, long form; cytokine; NMR {Mythimna separata} SCOP: j.8.1.1 PDB: 2eqt_A
Probab=25.54 E-value=36 Score=23.40 Aligned_cols=17 Identities=24% Similarity=0.587 Sum_probs=14.3
Q ss_pred ecCCCceeccCCCCccceeec
Q psy6572 1315 HCAEGYHMVHGKNKTSSCVAN 1335 (1416)
Q Consensus 1315 ~C~~gy~~~~~~~~~~~Cka~ 1335 (1416)
.|.+||++.+|+ .||++
T Consensus 6 gc~~gy~rtadg----rckpt 22 (28)
T 2eqq_A 6 GCVAGYMRTPDG----RCKPT 22 (28)
T ss_dssp CCSTTEEECTTC----CEEES
T ss_pred cccccceECCCC----ccCce
Confidence 589999999995 59975
No 483
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=25.32 E-value=7.2e+02 Score=27.45 Aligned_cols=125 Identities=7% Similarity=-0.088 Sum_probs=59.2
Q ss_pred CeEEEeecCCCceEEEEcCCCCCc-ce-eeecCCcceEEEeeC----C-CCceEEEEecCCCCCEEEeecCCCCCe---e
Q psy6572 631 DTIEVAKLDGRFRKVLINKGLQEP-RG-IALNPAYGYMYWTDW----G-QNAHIGKAKMDGSNPKVIISKNLSWPN---A 700 (1416)
Q Consensus 631 ~~I~v~~ldG~~~~vLi~~~l~~P-~g-IavDp~~g~LYWtD~----g-~~~~I~ra~mDGs~r~vlv~~~l~~P~---g 700 (1416)
+.|++.++....-+.+.. +..| +. .++-...++||+.-- + ....|++.++|-...+-.....+..|. +
T Consensus 168 ~~v~~yd~~~~~W~~~~~--~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE--SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEE--CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCC--CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 578888887655444432 2222 11 232234678888731 0 023566666643332222222333332 2
Q ss_pred EEeecCCCeEEEecCCC----------------------CeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEE
Q psy6572 701 LTISYETNELFWGDAHE----------------------DYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLF 758 (1416)
Q Consensus 701 LaiD~~~~rLYWtD~~~----------------------~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LY 758 (1416)
.++-..+++||+.-... ..|+..++....-+.+.... . -..-.++++.+++||
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p---~--~r~~~~~~~~~~~i~ 320 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS---Q--GRAYGVSLPWNNSLL 320 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS---S--CCBSSEEEEETTEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC---C--CcccceeEEeCCEEE
Confidence 11223478999885421 25677777644434442211 0 111235566888998
Q ss_pred Eeec
Q psy6572 759 WTDW 762 (1416)
Q Consensus 759 wtD~ 762 (1416)
+.-.
T Consensus 321 v~GG 324 (357)
T 2uvk_A 321 IIGG 324 (357)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8654
No 484
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=23.27 E-value=7.8e+02 Score=27.13 Aligned_cols=187 Identities=10% Similarity=-0.011 Sum_probs=88.5
Q ss_pred ceeeeeecCCCeEEEeeccCCCccEEEEecC-CCCeEEee--cCCCceEEEEccCCcEEEeeCCCCeEEEeecC-CCceE
Q psy6572 569 AVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-SQPELLFP--ATSPDGLTVDWVGRNLYWCDKGLDTIEVAKLD-GRFRK 644 (1416)
Q Consensus 569 ~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~--l~~p~gLAvD~~~~~LYwtD~~~~~I~v~~ld-G~~~~ 644 (1416)
+.+|.+.. .+.+|.+... +.|+|..-. ...+.+.. .....+|++++. +.+|.+. ..+.|++..-. |..-+
T Consensus 124 ~~~i~~~~-~~~~~~~~~~---g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g-~~G~~~~S~d~gG~tW~ 197 (327)
T 2xbg_A 124 PRLIKALG-NGSAEMITNV---GAIYRTKDSGKNWQALVQEAIGVMRNLNRSPS-GEYVAVS-SRGSFYSTWEPGQTAWE 197 (327)
T ss_dssp EEEEEEEE-TTEEEEEETT---CCEEEESSTTSSEEEEECSCCCCEEEEEECTT-SCEEEEE-TTSSEEEEECTTCSSCE
T ss_pred eEEEEEEC-CCCEEEEeCC---ccEEEEcCCCCCCEEeecCCCcceEEEEEcCC-CcEEEEE-CCCcEEEEeCCCCCcee
Confidence 45555533 4566665432 356665433 23343333 234456777653 4444333 34567776543 45444
Q ss_pred EEEcCCCCCcceeeecCCcceEEEeeCCCCceEEEEecC-CCCCEEEeecCCCC---CeeEEeecCCCeEEEecCCCCeE
Q psy6572 645 VLINKGLQEPRGIALNPAYGYMYWTDWGQNAHIGKAKMD-GSNPKVIISKNLSW---PNALTISYETNELFWGDAHEDYI 720 (1416)
Q Consensus 645 vLi~~~l~~P~gIavDp~~g~LYWtD~g~~~~I~ra~mD-Gs~r~vlv~~~l~~---P~gLaiD~~~~rLYWtD~~~~~I 720 (1416)
.+....-....+|++++. +.||.+.. ...|.+...| |..-+.+....+.. ..+|+++. .+.||.+-. .+.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~-g~~~~~~~--~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTPD-GRLWMIVN--GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL 272 (327)
T ss_dssp EEECCSSSCEEEEEECTT-SCEEEEET--TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE
T ss_pred ECCCCCCCccceeEECCC-CCEEEEeC--CceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE
Confidence 443333344567888775 55665542 2245554445 32211111111111 23455543 566776643 3456
Q ss_pred EEEeCCCCceEEEEeccCCCCccc-ccceeEEEecCcEEEeecCCCeeEEec
Q psy6572 721 AVSDLNGENIKIIVSRRMDPTINL-HHVFALAVFEDHLFWTDWEMKSIERCD 771 (1416)
Q Consensus 721 ~~~~ldG~~r~~v~~~~~~p~~~l-~~P~~lav~~d~LYwtD~~~~~I~~~n 771 (1416)
++..-.|..-+.+.... .+ ...++|++..+..+|+-...+.|++.+
T Consensus 273 ~~S~DgG~tW~~~~~~~-----~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 273 LCSQDGGQTWQQDVDVK-----KVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEESSTTSSCEECGGGT-----TSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred EEeCCCCcccEEcCccC-----CCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 54433344433332110 01 233566665555566666667777654
No 485
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=23.11 E-value=7.1e+02 Score=26.62 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=92.5
Q ss_pred CCCeEEEeeccCC---CccEEEEecC-CC---CeEEeecCCCc---eEEEEccCCcEEEeeCC-----CCeEEEeecCCC
Q psy6572 577 VDNCLYWSDVTMH---GSSIRRSCNN-SQ---PELLFPATSPD---GLTVDWVGRNLYWCDKG-----LDTIEVAKLDGR 641 (1416)
Q Consensus 577 ~~~~LYwtD~~~~---~~~I~r~~l~-s~---~~~l~~l~~p~---gLAvD~~~~~LYwtD~~-----~~~I~v~~ldG~ 641 (1416)
.+++||+.-.... ...++++++. .. .+.+..+..|+ ++++ .+++||+.-.. ...+++.++...
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 3578888644221 1357777777 44 55554432222 2333 37899987532 357888888765
Q ss_pred ceEEEEcCCCCCcc---eeeecCCcceEEEeeCC----CCceEEEEecCCCCCEEEeecCCCCCe---eEEeecCCCeEE
Q psy6572 642 FRKVLINKGLQEPR---GIALNPAYGYMYWTDWG----QNAHIGKAKMDGSNPKVIISKNLSWPN---ALTISYETNELF 711 (1416)
Q Consensus 642 ~~~vLi~~~l~~P~---gIavDp~~g~LYWtD~g----~~~~I~ra~mDGs~r~vlv~~~l~~P~---gLaiD~~~~rLY 711 (1416)
.-+.+.. +..|+ ++++ ..++||+.--. ....|++.++....-+.+ ..+..|+ ++++ .+++||
T Consensus 139 ~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~--~~~~i~ 210 (301)
T 2vpj_A 139 QWSMLGD--MQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPMATKRSGAGVAL--LNDHIY 210 (301)
T ss_dssp EEEEEEE--CSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEE--ETTEEE
T ss_pred eEEECCC--CCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCCCcccccceEEE--ECCEEE
Confidence 5444432 22222 2222 25788887311 124577777665433333 2333332 3333 378999
Q ss_pred EecCC-----CCeEEEEeCCCCceEEEEeccCCCCcccccceeEEEecCcEEEeec
Q psy6572 712 WGDAH-----EDYIAVSDLNGENIKIIVSRRMDPTINLHHVFALAVFEDHLFWTDW 762 (1416)
Q Consensus 712 WtD~~-----~~~I~~~~ldG~~r~~v~~~~~~p~~~l~~P~~lav~~d~LYwtD~ 762 (1416)
+.-.. .+.|+..++....-+.+... |. -..-.++++.+++||+.-.
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~--~r~~~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDSWTTVTSM---TT--PRCYVGATVLRGRLYAIAG 261 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEEEECCC---SS--CCBSCEEEEETTEEEEECC
T ss_pred EEeCCCCCcccceEEEEeCCCCcEEECCCC---CC--cccceeEEEECCEEEEEcC
Confidence 98543 45788888765544444221 11 1123466778899998754
No 486
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=21.60 E-value=39 Score=28.28 Aligned_cols=21 Identities=38% Similarity=0.874 Sum_probs=15.9
Q ss_pred cCCeeeecCCCCcEEecCCCceEec
Q psy6572 511 TLGSYSCSCAPGYALLSDKHGCKAT 535 (1416)
Q Consensus 511 t~gsy~C~C~~Gy~L~~dg~sC~a~ 535 (1416)
..++|.|.|++||. |..|...
T Consensus 29 ~~~~~~C~C~~Gf~----G~~Ce~~ 49 (58)
T 3ltf_D 29 DLPVYSCECAIGFM----GQRCEYK 49 (58)
T ss_dssp TEEEEEEEECTTEE----SSSSCEE
T ss_pred CCCCEEeECCCCCc----cCCCccc
Confidence 34578999999997 6677654
No 487
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=21.56 E-value=4.3e+02 Score=35.77 Aligned_cols=35 Identities=23% Similarity=0.783 Sum_probs=28.3
Q ss_pred CCcCCCCCccc--eeeecCCeeeecCC-CCcEEecCCCceEe
Q psy6572 496 TNECLDRPCSH--YCRNTLGSYSCSCA-PGYALLSDKHGCKA 534 (1416)
Q Consensus 496 idEC~~~~Csq--~C~nt~gsy~C~C~-~Gy~L~~dg~sC~a 534 (1416)
.+.|...+|.+ .|+....+|+|.|+ +||. |..|..
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~----G~~C~~ 1054 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 1054 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCB----STTSCB
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCC----CCCccC
Confidence 36677778866 89999999999999 6996 778864
No 488
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=20.64 E-value=1.2e+03 Score=28.41 Aligned_cols=137 Identities=8% Similarity=-0.073 Sum_probs=66.9
Q ss_pred CCCeEEEeeccCCCccEEEEecC-CCCeEEeecCCCc---eEEEEccCCcEEEeeCC------CCeEEEeecCCCceEEE
Q psy6572 577 VDNCLYWSDVTMHGSSIRRSCNN-SQPELLFPATSPD---GLTVDWVGRNLYWCDKG------LDTIEVAKLDGRFRKVL 646 (1416)
Q Consensus 577 ~~~~LYwtD~~~~~~~I~r~~l~-s~~~~l~~l~~p~---gLAvD~~~~~LYwtD~~------~~~I~v~~ldG~~~~vL 646 (1416)
.+++||++-.... ..++++++. ...+.+..+..++ ++++- ..++||+.-.. ...+++.++....-+.+
T Consensus 252 ~~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 252 GNGQIVVTGGNDA-KKTSLYDSSSDSWIPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TTSCEEEECSSST-TCEEEEEGGGTEEEECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCEEEeCCCCC-CceEEecCcCCceeECCCCCccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 4678888865432 367887776 3344443333333 23331 27889987652 25688888765443433
Q ss_pred Ec---CCCCCcceeeecCCcceEEEeeCC--------CCceEEEEecCCCCCEEEeecCC---------CCCeeEEeecC
Q psy6572 647 IN---KGLQEPRGIALNPAYGYMYWTDWG--------QNAHIGKAKMDGSNPKVIISKNL---------SWPNALTISYE 706 (1416)
Q Consensus 647 i~---~~l~~P~gIavDp~~g~LYWtD~g--------~~~~I~ra~mDGs~r~vlv~~~l---------~~P~gLaiD~~ 706 (1416)
.. ..+..++..++-...++||+.-.. ....|++.+.............. ..-.++.++..
T Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 330 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 11 111122221222234556655421 12345555555443222221111 11234444556
Q ss_pred CCeEEEecC
Q psy6572 707 TNELFWGDA 715 (1416)
Q Consensus 707 ~~rLYWtD~ 715 (1416)
+++||+.-.
T Consensus 410 ~~~i~v~GG 418 (656)
T 1k3i_A 410 KGKILTFGG 418 (656)
T ss_dssp TTEEEEECC
T ss_pred CCeEEEEeC
Confidence 889999853
No 489
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=20.24 E-value=3.7e+02 Score=32.96 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=36.3
Q ss_pred cceEEEeeCCCCceEEEEecCCCCCEEEeecCCCCCeeEEee----cCCCeEEEecCCCCeEEEEeCCCCc
Q psy6572 663 YGYMYWTDWGQNAHIGKAKMDGSNPKVIISKNLSWPNALTIS----YETNELFWGDAHEDYIAVSDLNGEN 729 (1416)
Q Consensus 663 ~g~LYWtD~g~~~~I~ra~mDGs~r~vlv~~~l~~P~gLaiD----~~~~rLYWtD~~~~~I~~~~ldG~~ 729 (1416)
...||+.|......|.++.+.+... ....|..|. .+| ...+++|..|. .+.|+|++|.+..
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~---~~~Gls~~~--~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTG---VPNGLSSPR--LADNNSDGVADYAYAGDL-QGNLWRFDLIAGK 286 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTT---SCCCEEEEE--EECTTSSSBCCEEEEEET-TSEEEEEECSCSS
T ss_pred ccEEEEEECCCCceEEEEecCCCCc---cCCccccce--EEecCCCCceeEEEEEeC-CCcEEEEEcCCCC
Confidence 5678888876555676666544210 001111121 233 23478999995 5789999997754
No 490
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=20.16 E-value=1.5e+02 Score=40.31 Aligned_cols=38 Identities=21% Similarity=0.532 Sum_probs=0.0
Q ss_pred ccccCCcCCCCCccc--eeeecCCeeeecCCC-CcEEecCCCceE
Q psy6572 492 LCVDTNECLDRPCSH--YCRNTLGSYSCSCAP-GYALLSDKHGCK 533 (1416)
Q Consensus 492 tC~didEC~~~~Csq--~C~nt~gsy~C~C~~-Gy~L~~dg~sC~ 533 (1416)
.|...+||..++|.+ .|++..+.|+|.|++ ||. |..|.
T Consensus 186 pC~~~~~~~~~~C~ngg~C~~~~~~~~C~C~~~g~~----G~~Ce 226 (1245)
T 3qcw_A 186 PCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFR----GKDCS 226 (1245)
T ss_dssp ---------------------------------------------
T ss_pred CcCCcccCCCCCCCCCCCCccCCCCceeECCCCCcc----CCccc
Confidence 376667777778865 788888999999996 885 55665
No 491
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=20.11 E-value=1.2e+03 Score=28.80 Aligned_cols=78 Identities=12% Similarity=-0.032 Sum_probs=56.0
Q ss_pred eEEecccccceeeeeecCCCeEEEeeccCCCccEEEEecC-------CCC----eEE-ee---cCCCceEEEEccCCcEE
Q psy6572 560 TIRIHNQTNAVGLDFDWVDNCLYWSDVTMHGSSIRRSCNN-------SQP----ELL-FP---ATSPDGLTVDWVGRNLY 624 (1416)
Q Consensus 560 ~~~~~~l~~~~~l~~D~~~~~LYwtD~~~~~~~I~r~~l~-------s~~----~~l-~~---l~~p~gLAvD~~~~~LY 624 (1416)
+..++...+|.|+.+++.++.||....... ++.++.+. ... .++ .. ...|.-.++|..+ +.|
T Consensus 316 ~~~iP~pksPHGv~vsPDGkyi~v~GKLsp--tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aY 392 (638)
T 3sbq_A 316 TRYVPVPKNPHGCNTSSDGKYFIAAGKLSP--TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAY 392 (638)
T ss_dssp EEEEEESSSCCCEEECTTSCEEEEECTTSS--BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEE
T ss_pred EEEEeCCCCCcceeeCCCCCEEEEcCCCCC--eEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceE
Confidence 445556678999999999999999988764 66666544 111 122 22 4578889999855 999
Q ss_pred EeeCCCCeEEEeecCC
Q psy6572 625 WCDKGLDTIEVAKLDG 640 (1416)
Q Consensus 625 wtD~~~~~I~v~~ldG 640 (1416)
-|-.-..+|.+-+++.
T Consensus 393 TtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 393 TTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEETTTTEEEEEEHHH
T ss_pred eeeeecceEEEEeccH
Confidence 9988778888877653
Done!