RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6575
(351 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 253 bits (648), Expect = 4e-81
Identities = 62/288 (21%), Positives = 113/288 (39%), Gaps = 62/288 (21%)
Query: 65 IEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMY 124
++ L +L+ A + D +L T F A +T+A + ++ L+
Sbjct: 217 LKRGEEVPADILTQILK---AEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQ 273
Query: 125 PEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDED 184
PE++ + + E+D V G
Sbjct: 274 PEIVAR---------------------------------------LQAEVDEVIG----- 289
Query: 185 DGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAG 244
R DL + YL V+KE+ RLYPPA FR ++EE + +P ++ +
Sbjct: 290 SKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYV 349
Query: 245 IHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKT 304
+ R Y+ +P+ F P+RF P + + + PFS G R+CIGQ++A +++K
Sbjct: 350 MGRMDTYFEDPLTFNPDRFGPGAP--------KPRFTYFPFSLGHRSCIGQQFAQMEVKV 401
Query: 305 VISTILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGA-VIFQSRKQ 351
V++ +L++ P + ++ TL+ D + R
Sbjct: 402 VMAKLLQRLEFRLVPGQRF------GLQEQATLKPLDPVLCTLRPRGW 443
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 241 bits (616), Expect = 3e-76
Identities = 64/282 (22%), Positives = 108/282 (38%), Gaps = 57/282 (20%)
Query: 70 TKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQ 129
K L LLE D + + EI ++ + +T A+ +L LA +PE
Sbjct: 239 QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHAD 298
Query: 130 KIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPP 189
+ + DE+++V GG RP
Sbjct: 299 R---------------------------------------IRDEVEAVTGG------RPV 313
Query: 190 TPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNK 249
D+ + + VI E RL P ++ R+ E LG + +PAGA I+ + I R+
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 250 NYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTI 309
+ + ++F P+R+ P+ + YA PFSAG R C ++M Q+ + + +
Sbjct: 374 KSYDDNLEFDPDRWLPERA------ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAAL 427
Query: 310 LRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGAVIFQSRKQ 351
+Y + +R+ ITLR D V +R
Sbjct: 428 ATKYRFEQVA------GSNDAVRVGITLRPHDLLVRPVARHH 463
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 236 bits (605), Expect = 4e-74
Identities = 62/295 (21%), Positives = 110/295 (37%), Gaps = 65/295 (22%)
Query: 61 EFLDIEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLL 120
+ E K + F L+ + LT + + + AA DT + + +L L
Sbjct: 264 RRISTEEKLEECMDFATELILAEK--RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFL 321
Query: 121 LAMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGG 180
+A +P V + + EI +V G
Sbjct: 322 IAKHPNVEEA---------------------------------------IIKEIQTVIGE 342
Query: 181 PDEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIML 240
R D+ + +E I E+ R P +V R+ E+ + + + G +I+L
Sbjct: 343 ------RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIIL 396
Query: 241 TIAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAML 300
I +HR + ++ P +F E F + F PF GPR C G+ AM+
Sbjct: 397 NIGRMHRLE-FFPKPNEFTLENFAKN----------VPYRYFQPFGFGPRGCAGKYIAMV 445
Query: 301 QMKTVISTILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGA----VIFQSRKQ 351
MK ++ T+LR++H+ Q + I + D++L ++ +IF R
Sbjct: 446 MMKAILVTLLRRFHVKTLQG-QCVESI--QKIHDLSLHPDETKNMLEMIFTPRNS 497
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 230 bits (589), Expect = 3e-72
Identities = 64/281 (22%), Positives = 106/281 (37%), Gaps = 54/281 (19%)
Query: 69 NTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVL 128
K L+ LL+ + LTD E+ L L A T++T ++ + LA +
Sbjct: 227 QEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQ 286
Query: 129 QKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRP 188
+K E +V G ++ P
Sbjct: 287 KK---------------------------------------CYLEQKTVCG----ENLPP 303
Query: 189 PTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRN 248
T L +N L+ IKET RL PP I+ R + + +P G + ++ R
Sbjct: 304 LTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRL 363
Query: 249 KNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVIST 308
K+ WV + F P+R+ D S +A++PF AG CIG+ +A +Q+KT+ ST
Sbjct: 364 KDSWVERLDFNPDRYLQDNPAS------GEKFAYVPFGAGRHRCIGENFAYVQIKTIWST 417
Query: 309 ILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGAVIFQSR 349
+LR Y + + E+ + ++ R
Sbjct: 418 MLRLYEFDLIDGYF-----PTVNYTTMIHTPENPVIRYKRR 453
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 225 bits (576), Expect = 3e-70
Identities = 55/272 (20%), Positives = 104/272 (38%), Gaps = 54/272 (19%)
Query: 75 FLELLLEI-DHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDG 133
L++L+ + + + EI ++ FA T++ S L+ L + +
Sbjct: 225 MLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA--- 281
Query: 134 LYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPAD 193
V DE+D ++G DGR +
Sbjct: 282 ------------------------------------VIDELDELYG-----DGRSVSFHA 300
Query: 194 LHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
L + LE V+KET RL+PP I+ R E + H + G + + A +R +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+P F+P R+ + + +IPF AG C+G +A++Q+K + S +LR+Y
Sbjct: 361 DPHDFVPARYEQPRQE-----DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 314 HLSPSPRFQTIADIDKRIRMDITLRMEDGAVI 345
+ + + + +++ A +
Sbjct: 416 EFEMAQP----PESYRNDHSKMVVQLAQPAAV 443
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 224 bits (572), Expect = 1e-69
Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 62/285 (21%)
Query: 70 TKTKSFLELLLE-IDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVL 128
++ L +L D + L D I ++ T A +TT+ S L L P VL
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 129 QKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRP 188
QK +E V
Sbjct: 288 QK---------------------------------------AAEEAARVLVD------PV 302
Query: 189 PTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPL-GRHVLPAGASIMLTIAGIHR 247
P+ + + Y+ V+ E RL+P AP E+ L G + L G +M+ I +HR
Sbjct: 303 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 248 NKNYW-VNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVI 306
+K W + +F PERF + +AF PF G R CIGQ++A+ + V+
Sbjct: 363 DKTIWGDDVEEFRPERFENPSA--------IPQHAFKPFGNGQRACIGQQFALHEATLVL 414
Query: 307 STILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGAVIFQSRKQ 351
+L+ + ++ I+ +TL+ E V +S+K
Sbjct: 415 GMMLKHFDFEDHTNYEL------DIKETLTLKPEGFVVKAKSKKI 453
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 217 bits (554), Expect = 4e-67
Identities = 56/284 (19%), Positives = 99/284 (34%), Gaps = 61/284 (21%)
Query: 68 KNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEV 127
K++ T L LL + ++ E+ + FA T++ + +L L V
Sbjct: 227 KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 286
Query: 128 LQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGR 187
+ ++ L EI+ +
Sbjct: 287 -KHLEALR------------------------------------KEIEEFPA-------Q 302
Query: 188 PPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHR 247
+ M + E +E+ R PP ++ R+V +V +G +V+P G I + H
Sbjct: 303 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 248 NKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVIS 307
++ + P ++ PER ++ AFI F AG CIGQK+ +LQ+KT+++
Sbjct: 363 DEEAFPEPRRWDPERD------------EKVEGAFIGFGAGVHKCIGQKFGLLQVKTILA 410
Query: 308 TILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGA-VIFQSRK 350
T R Y D + V + RK
Sbjct: 411 TAFRSYDFQLLRD----EVPDPDYHTMVVGPTASQCRVKYIRRK 450
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 210 bits (538), Expect = 9e-65
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 56/275 (20%)
Query: 68 KNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEV 127
+ + L +LL + L+ E+ ++ L FA +T +A S+ LLL + ++
Sbjct: 217 QPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDI 276
Query: 128 LQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGR 187
++ V E + + +
Sbjct: 277 RER---------------------------------------VRQEQNKLQLS------Q 291
Query: 188 PPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHR 247
T L M YL+ V++E RL PP FR++ ++ P G + I+ H
Sbjct: 292 ELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHA 351
Query: 248 NKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVIS 307
+ + + +P +F PERF PD S + P+A +PF G R C+G+++A L+MK +
Sbjct: 352 DPDLYPDPEKFDPERFTPDGSAT-----HNPPFAHVPFGGGLRECLGKEFARLEMKLFAT 406
Query: 308 TILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDG 342
+++Q+ + + + + + + R +D
Sbjct: 407 RLIQQF------DWTLLPGQNLELVVTPSPRPKDN 435
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 201 bits (514), Expect = 7e-61
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 56/254 (22%)
Query: 66 EYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYP 125
Y FL + + D L+ E+ +T L AA++TTA + IL L+ P
Sbjct: 260 RYSQQPGADFLCDIYQ-----QDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNP 314
Query: 126 EVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDD 185
+ ++ + E+ SV D
Sbjct: 315 QAQRR---------------------------------------LLQEVQSVLP-----D 330
Query: 186 GRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGI 245
+ P DL +M YL+ +KE+ RL P P R +D+ LG + LP G + L +
Sbjct: 331 NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVL 390
Query: 246 HRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTV 305
+++ + + +F PER+ E + +P+A +PF G R CIG++ A LQ+
Sbjct: 391 GSSEDNFEDSHKFRPERWLQKEK-------KINPFAHLPFGIGKRMCIGRRLAELQLHLA 443
Query: 306 ISTILRQYHLSPSP 319
+ I+++Y + +
Sbjct: 444 LCWIIQKYDIVATD 457
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 197 bits (504), Expect = 2e-60
Identities = 58/267 (21%), Positives = 93/267 (34%), Gaps = 80/267 (29%)
Query: 77 ELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYR 136
E I H L L E TL A +T A+A + LLL+ P+ ++
Sbjct: 193 EAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR------ 246
Query: 137 PERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHS 196
V + ++
Sbjct: 247 ---------------------------------VAESEEAALA----------------- 256
Query: 197 MNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPI 256
+E RLYPPA I+ R+++ + LG LP G +++L+ R ++ +
Sbjct: 257 ------AFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGE 308
Query: 257 QFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQYHLS 316
F PERF + R + PF G R C+G+ +A+L+ V+ R++ L
Sbjct: 309 AFRPERFLEE--------RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLD 360
Query: 317 PSPRFQTIADIDKRIRMDITLRMEDGA 343
P P R+ +TLR E G
Sbjct: 361 PLP--------FPRVLAQVTLRPEGGL 379
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 193 bits (493), Expect = 9e-58
Identities = 46/294 (15%), Positives = 100/294 (34%), Gaps = 60/294 (20%)
Query: 59 EEEFLDIEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTIL 118
+ + ++ K + + +L + D K++ +I +T + +DTT+ L
Sbjct: 242 QNFYWELRQKGSVHHDYRGILYRL--LGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL 299
Query: 119 LLLAMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVF 178
+A +V + E+ +
Sbjct: 300 YEMARNLKVQDM---------------------------------------LRAEVLAAR 320
Query: 179 GGPDEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASI 238
+ L + L+ IKET RL+P + + R + ++ L +++PA +
Sbjct: 321 H-----QAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLV 375
Query: 239 MLTIAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYA 298
+ I + R ++ +P F P R+ + + + + F G R C+G++ A
Sbjct: 376 QVAIYALGREPTFFFDPENFDPTRWLSKD-------KNITYFRNLGFGWGVRQCLGRRIA 428
Query: 299 MLQMKTVISTILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDG-AVIFQSRKQ 351
L+M + +L + + D ++ L E + F Q
Sbjct: 429 ELEMTIFLINMLENFRVEIQH------LSDVGTTFNLILMPEKPISFTFWPFNQ 476
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 184 bits (468), Expect = 4e-54
Identities = 44/298 (14%), Positives = 93/298 (31%), Gaps = 52/298 (17%)
Query: 60 EEFLDIEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILL 119
E + ++ S L L + D E + +A+ T A L
Sbjct: 223 ESLRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLF 282
Query: 120 LLAMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFG 179
+ PE ++ T+E+
Sbjct: 283 QMIRNPEAMKA---------------------------------------ATEEVKRTLE 303
Query: 180 GPDED-----DGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPL----GRH 230
+ + + A+L+ + L+ +IKE+ RL + R E+ L G +
Sbjct: 304 NAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLN-IRTAKEDFTLHLEDGSY 362
Query: 231 VLPAGASIMLTIAGIHRNKNYWVNPIQFIPERF---HPDESVSSSHIRQRHPYAFIPFSA 287
+ I L +H + + +P+ F +R+ + + + Y ++PF +
Sbjct: 363 NIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGS 422
Query: 288 GPRNCIGQKYAMLQMKTVISTILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGAVI 345
G C G+ +A+ ++K + +L + L +D+ L +
Sbjct: 423 GATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEF 480
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 178 bits (455), Expect = 3e-52
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 54/269 (20%)
Query: 66 EYKNTKTKSFLELLLEI----DHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLL 121
E FL+L+++ + + L+D E++ + FA +TT++ S I+ L
Sbjct: 240 EDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYEL 299
Query: 122 AMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGP 181
A +P+V QK L+ +EID+V
Sbjct: 300 ATHPDVQQK---------------------------LQ------------EEIDAVL--- 317
Query: 182 DEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLT 241
+ PPT + M YL+ V+ ET RL+P A + R ++V + +P G +M+
Sbjct: 318 -PNKA-PPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIP 375
Query: 242 IAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQ 301
+HR+ YW P +F+PERF PY + PF +GPRNCIG ++A++
Sbjct: 376 SYALHRDPKYWTEPEKFLPERFSKKN------KDNIDPYIYTPFGSGPRNCIGMRFALMN 429
Query: 302 MKTVISTILRQYHLSPSPRFQTIADIDKR 330
MK + +L+ + P Q +
Sbjct: 430 MKLALIRVLQNFSFKPCKETQIPLKLSLG 458
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 179 bits (455), Expect = 3e-52
Identities = 48/292 (16%), Positives = 86/292 (29%), Gaps = 53/292 (18%)
Query: 65 IEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMY 124
+ +LE L H + +++ L +A A +LL L
Sbjct: 235 RLARRAHRSKWLESYL--LHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKN 292
Query: 125 PEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFG--GPD 182
PE L V E++S+
Sbjct: 293 PEALAA---------------------------------------VRGELESILWQAEQP 313
Query: 183 EDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPL-----GRHVLPAGAS 237
L S L+ V+ E+ RL I R+V ++ + L G
Sbjct: 314 VSQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFI-TREVVVDLAMPMADGREFNLRRGDR 372
Query: 238 IMLTIA-GIHRNKNYWVNPIQFIPERFHPDESVSSSH---IRQRHPYAFIPFSAGPRNCI 293
++L R+ + +P F RF + +R +P+ AG +C+
Sbjct: 373 LLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCL 432
Query: 294 GQKYAMLQMKTVISTILRQYHLSPSPRFQTIADIDKRIRMDITLRMEDGAVI 345
G+ YA+ +K + +L L I + D ++ E +
Sbjct: 433 GRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPV 484
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 165 bits (418), Expect = 5e-47
Identities = 34/276 (12%), Positives = 72/276 (26%), Gaps = 67/276 (24%)
Query: 61 EFLDIEYKNTKTKSFLELLLEIDHAADDK--LTDAEILPELTTLFFAALDTTATANSTIL 118
FL N F + + A+ D + L + F L
Sbjct: 230 AFLIKSTYNKLYDYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTL 289
Query: 119 LLLAMY-PEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSV 177
+ + + + L +EI
Sbjct: 290 KWIGLAGENLHTQ---------------------------LA------------EEIRGA 310
Query: 178 FGGPDEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPL----GRHVLP 233
T + M + V+ E+ R+ PP P + + + +
Sbjct: 311 IK---SYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVK 367
Query: 234 AGASIMLTIAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGP---- 289
G + ++ + P +++P+RF D ++ +S GP
Sbjct: 368 KGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD---------GEALLKYVWWSNGPETES 418
Query: 290 -----RNCIGQKYAMLQMKTVISTILRQYHLSPSPR 320
+ C G+ + +L + + + R+Y
Sbjct: 419 PTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL 454
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 160 bits (407), Expect = 2e-45
Identities = 40/274 (14%), Positives = 77/274 (28%), Gaps = 70/274 (25%)
Query: 68 KNTKTKSFLELLLEIDHAADDKLTDAEILP-----ELTTLFFAALDTTATANSTILLLLA 122
+ L +A + L +A+ L L FA T + +
Sbjct: 248 PALVKSDYQRLYEFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMV 307
Query: 123 MY-----PEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSV 177
+V + L +EI SV
Sbjct: 308 KRIGRAGHQVHNR---------------------------LA------------EEIRSV 328
Query: 178 FGGPDEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRH----VLP 233
+G T + M + V+ E R PP + + +++ + H +
Sbjct: 329 IK----SNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVK 384
Query: 234 AGASIMLTIAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPF-------S 286
AG + R+ + +F+PERF +E + + +
Sbjct: 385 AGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEG------EKLLRHVLWSNGPETETPT 438
Query: 287 AGPRNCIGQKYAMLQMKTVISTILRQYHLSPSPR 320
G + C G+ + +L + + I R+Y
Sbjct: 439 VGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 144 bits (366), Expect = 6e-40
Identities = 35/256 (13%), Positives = 67/256 (26%), Gaps = 75/256 (29%)
Query: 68 KNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEV 127
T + + L + +L EL + + + L L +P+
Sbjct: 206 LKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKY 264
Query: 128 LQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGR 187
+ + R +
Sbjct: 265 KEWL----RSGN---------------------SREREM--------------------- 278
Query: 188 PPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHR 247
++E R YP P + V ++ G S++L + G +
Sbjct: 279 ---------------FVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNH 323
Query: 248 NKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGP----RNCIGQKYAMLQMK 303
+ W +P +F PERF R+ + + IP G C G+ + MK
Sbjct: 324 DPRLWDHPDEFRPERFAE---------REENLFDMIPQGGGHAEKGHRCPGEGITIEVMK 374
Query: 304 TVISTILRQYHLSPSP 319
+ ++ Q
Sbjct: 375 ASLDFLVHQIEYDVPE 390
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 143 bits (363), Expect = 1e-39
Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 21/159 (13%)
Query: 192 ADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNY 251
A + +Y E ++E R YP P V + ++ P G ++L + G + +
Sbjct: 266 ALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 252 WVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGP----RNCIGQKYAMLQMKTVIS 307
W +P +F PERF + FIP G C G+ + MK
Sbjct: 326 WADPQEFRPERFRA---------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAH 376
Query: 308 TILRQYHLSPSPRFQTIADIDKRIRMD-ITLRMEDGAVI 345
++ + D D I + + G V+
Sbjct: 377 LLVNAMRYD-------VPDQDLSIDFARLPALPKSGFVM 408
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 141 bits (357), Expect = 3e-38
Identities = 42/302 (13%), Positives = 83/302 (27%), Gaps = 62/302 (20%)
Query: 60 EEFLD--IEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTI 117
++L + + +S+L + D+ + + + A +
Sbjct: 219 WKWLTPSGLDRKPREQSWLGSYV--KQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWV 276
Query: 118 LLLLAMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSV 177
+ L +PE L+ V +EI
Sbjct: 277 MGYLLTHPEALRA---------------------------------------VREEIQG- 296
Query: 178 FGGPDEDDGRPPTPADLHSMNYLECVIKETARLYPPAPIVFRQVDEEVPL-----GRHVL 232
+ + V+ ET RL A I R V ++ + + L
Sbjct: 297 -------GKHLRLEERQKNTPVFDSVLWETLRLTAAALI-TRDVTQDKKICLSNGQEYHL 348
Query: 233 PAGASIML-TIAGIHRNKNYWVNPIQFIPERF---HPDESVSSSHIRQRHPYAFIPFSAG 288
G + + + P F +RF E R Y +P+
Sbjct: 349 RRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTE 408
Query: 289 PRNCIGQKYAMLQMKTVISTILRQYHLS-PSPRFQTIADIDKRIRMDITLRMEDGAVIFQ 347
C G+ +A+ +K ++ TIL ++ + R I D + ++
Sbjct: 409 DNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYR 468
Query: 348 SR 349
R
Sbjct: 469 IR 470
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 119 bits (302), Expect = 2e-30
Identities = 52/246 (21%), Positives = 84/246 (34%), Gaps = 51/246 (20%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
L + +I+ + +F A DT TA S L+ L PE+ +KI
Sbjct: 263 LFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKI--- 319
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
Q E+D+V G R P +D
Sbjct: 320 -------------------------------Q-----KELDTVIG-----RERRPRLSDR 338
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
+ YLE I ET R P + + L +P + + ++ + W
Sbjct: 339 PQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWE 398
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+P +F PERF + I + + F G R CIG+ A ++ ++ +L+Q
Sbjct: 399 DPSEFRPERF-LTAD--GTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQL 455
Query: 314 HLSPSP 319
S P
Sbjct: 456 EFSVPP 461
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 118 bits (299), Expect = 4e-30
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
L E+D +D + ++ + L A +TT +L +A+YP + ++
Sbjct: 254 YLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV--- 310
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
Q EID + G P+ D
Sbjct: 311 -------------------------------Q-----KEIDLIMGP-----NGKPSWDDK 329
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y E V+ E R P+ +F E+ + + +P G +++ + +H ++ YW
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+P F PERF S A +PFS G R+C+G+ A ++M + +L+++
Sbjct: 390 DPEVFHPERF------LDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
Query: 314 HLSPSP 319
HL
Sbjct: 444 HLHFPH 449
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 119 bits (300), Expect = 4e-30
Identities = 49/250 (19%), Positives = 85/250 (34%), Gaps = 56/250 (22%)
Query: 78 LLLEID-------HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQK 130
+L + H +L + +T +F A+ DT +TA +LLL YP+V +
Sbjct: 256 FILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTR 315
Query: 131 IDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPT 190
V E+D V G R P
Sbjct: 316 ---------------------------------------VQAELDQVVG-----RDRLPC 331
Query: 191 PADLHSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNK 249
D ++ Y+ + E R P+ + + + +P + + ++ +
Sbjct: 332 MGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDP 391
Query: 250 NYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTI 309
W NP F P RF + I + + FS G R CIG++ + +Q+ IS +
Sbjct: 392 LKWPNPENFDPARFLDKDG----LINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISIL 447
Query: 310 LRQYHLSPSP 319
Q +P
Sbjct: 448 AHQCDFRANP 457
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 117 bits (296), Expect = 1e-29
Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 57/277 (20%)
Query: 78 LLLEIDHAADDK----LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDG 133
+L + ++ L + + + LF +TTA+ S + L +PE+ ++
Sbjct: 259 MLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRR--- 315
Query: 134 LYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPAD 193
+ +E+D G T D
Sbjct: 316 ------------------------------------LQEELDRELG--PGASCSRVTYKD 337
Query: 194 LHSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYW 252
+ L I E RL P P+ + + + + +P G ++ + G H ++ W
Sbjct: 338 RARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW 397
Query: 253 VNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQ 312
P +F P+RF + + + F G R C+G+ A L++ V++ +L+
Sbjct: 398 EQPHEFRPDRFLEPGA----------NPSALAFGCGARVCLGESLARLELFVVLARLLQA 447
Query: 313 YHLSPSPRFQTIADIDKRIRMDITLRMEDGAVIFQSR 349
+ L P P + + + L+++ V Q R
Sbjct: 448 FTLLPPPV-GALPSLQPDPYCGVNLKVQPFQVRLQPR 483
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 115 bits (291), Expect = 4e-29
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
L E++ A + D + + LF A + TT+T + LLL+ ++P+V ++
Sbjct: 253 FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRR---- 308
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
V EID V G R P D
Sbjct: 309 -----------------------------------VQQEIDDVIGQ-----VRRPEMGDQ 328
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y VI E R P+ V ++ + +P G +++ ++ + +++ W
Sbjct: 329 AHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWE 388
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
P +F PE F + P AF+PFSAG R C+G+ A +++ +++L+ +
Sbjct: 389 KPFRFHPEHFLDAQG------HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
Query: 314 HLSPSP 319
S
Sbjct: 443 SFSVPT 448
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 114 bits (287), Expect = 2e-28
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 56/259 (21%)
Query: 62 FLDIEYKNTKTKSFLELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLL 121
+ + + + + + L+D IL + +F A ++TT + L L
Sbjct: 248 LMQAKMNSDNGNAGPDQ-------DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFL 300
Query: 122 AMYPEVLQKIDGLYRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGP 181
P+V +K + +EID G
Sbjct: 301 LHNPQVKKK---------------------------------------LYEEIDQNVG-- 319
Query: 182 DEDDGRPPTPADLHSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIML 240
R PT +D + + LE I+E RL P AP+ + + + + +G + G +++
Sbjct: 320 ---FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVII 376
Query: 241 TIAGIHRNKNYWVNPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAML 300
+ +H N+ W P QF+PERF + + +++PF AGPR+CIG+ A
Sbjct: 377 NLWALHHNEKEWHQPDQFMPERFL-NP---AGTQLISPSVSYLPFGAGPRSCIGEILARQ 432
Query: 301 QMKTVISTILRQYHLSPSP 319
++ +++ +L+++ L
Sbjct: 433 ELFLIMAWLLQRFDLEVPD 451
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 108 bits (272), Expect = 2e-26
Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
L++++ ++ T + LF A +TT+T LLLL +PEV K+
Sbjct: 250 FLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKV--- 306
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
Q +EI+ V G R P D
Sbjct: 307 -------------------------------Q-----EEIERVIGR-----NRSPCMQDR 325
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y + V+ E R P + V ++ +++P G +I++++ + + +
Sbjct: 326 SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFP 385
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
NP F P F + F+PFSAG R C+G+ A +++ +++IL+ +
Sbjct: 386 NPEMFDPHHF------LDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNF 439
Query: 314 HLSPSP 319
+L
Sbjct: 440 NLKSLV 445
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 108 bits (271), Expect = 2e-26
Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
LL ++ D ++ + +LFFA +TT+T LL+ YP V +++
Sbjct: 249 YLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERV--- 305
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
Q EI+ V G RPP D
Sbjct: 306 -------------------------------Q-----KEIEQVIGS-----HRPPALDDR 324
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y + VI E RL P V V ++ +V+P + ++ + Y+
Sbjct: 325 AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFE 384
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
P F P F + F+PFS G R C+G+ A ++ +TIL+ +
Sbjct: 385 TPNTFNPGHFLDANG------ALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Query: 314 HLSPSP 319
++
Sbjct: 439 SIASPV 444
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 107 bits (269), Expect = 4e-26
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
LL+E++ T I + LFFA +TT+T LL+L YPE+ +K+
Sbjct: 248 LLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKL--- 304
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
+EID V G R P D
Sbjct: 305 -------------------------------H-----EEIDRVIGP-----SRIPAIKDR 323
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y++ V+ E R P + + + +++P G ++ T+ + + +
Sbjct: 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFP 383
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+P +F PE F +E+ + F PFS G R C G+ A +++ ++ IL+ +
Sbjct: 384 DPEKFKPEHFL-NEN---GKFKYSD--YFKPFSTGKRVCAGEGLARMELFLLLCAILQHF 437
Query: 314 HLSPSP 319
+L P
Sbjct: 438 NLKPLV 443
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 104 bits (263), Expect = 3e-25
Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 54/246 (21%)
Query: 78 LLLEIDHAADDK---LTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGL 134
L+ + + ++ LF +T +T LLL +PEV K+
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKV--- 305
Query: 135 YRPERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADL 194
+EID V G R P D
Sbjct: 306 -------------------------------H-----EEIDRVIGK-----NRQPKFEDR 324
Query: 195 HSMNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWV 253
M Y+E VI E R P+ + R+V ++ LP G + + + R+ +++
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 254 NPIQFIPERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
NP F P+ F + + + AF+PFS G RNC G+ A +++ +T+++ +
Sbjct: 385 NPQDFNPQHF------LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 438
Query: 314 HLSPSP 319
L S
Sbjct: 439 RLKSSQ 444
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 53.1 bits (128), Expect = 6e-08
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERF 263
I ET R PP ++ RQ+ ++ +G + + I +R+ + P F R
Sbjct: 306 IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR- 364
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
S+ RH + F +G NC+G +A +++ V + +L +
Sbjct: 365 EDLGIKSAFSGAARH----LAFGSGIHNCVGTAFAKNEIEIVANIVLDKM 410
Score = 37.7 bits (88), Expect = 0.004
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKI 131
L+D +IL + + AA + + ++ L PE + +
Sbjct: 248 EYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV 295
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 51.2 bits (123), Expect = 2e-07
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 17/110 (15%)
Query: 203 VIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
+ E RL+P + R EV LG HV+ G +++ +A +R +P F P+
Sbjct: 258 TVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANR------DPEVFAEPD 311
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
R D R + ++ + +
Sbjct: 312 RLDVD----------RPDADRALSAHRGHPGRLEELVTALATAALRAAAK 351
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 50.3 bits (121), Expect = 4e-07
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 23/134 (17%)
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFH 264
E R P + R E++ + + G + L + +R +P F P+ F
Sbjct: 273 ECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR------DPSIFTNPDVFD 326
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQYHLSPSPRFQTI 324
R P + F G C+G A L+ + I+T+L++ PS +
Sbjct: 327 IT----------RSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM---PSLN---L 370
Query: 325 ADIDKRIRMDITLR 338
AD + R R R
Sbjct: 371 ADFEWRYRPLFGFR 384
Score = 31.1 bits (71), Expect = 0.59
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTA--TANSTILLLLAMYPEVLQK 130
DKLT+ E L A +TT +NS + LL +PE L K
Sbjct: 216 KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLL--QHPEQLLK 259
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 51.2 bits (122), Expect = 4e-07
Identities = 51/294 (17%), Positives = 85/294 (28%), Gaps = 102/294 (34%)
Query: 60 EEFLDIEYKNTKT-------KSFLELLLE----IDHAADDKLTDA--EILPELTTLF--- 103
E+F I + T+ + EL+ + + + ++L T F
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENC 94
Query: 104 ---------FAA--LDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNISTISSALFR 152
AA L T L+ Y RP +SALFR
Sbjct: 95 YLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAK---RPFD----KKSNSALFR 147
Query: 153 -LSAQNLRLMAYTDQRDIVTDEIDSVFGG--PDEDDGRPPTPADLHSMNYLECVIKETAR 209
+ N +L+A +FGG +D Y E E
Sbjct: 148 AVGEGNAQLVA--------------IFGGQGNTDD--------------YFE----ELRD 175
Query: 210 LY-PPAPIV---FRQVDEEV-PLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERFH 264
LY +V + E + L R A + T G++ + W+ P
Sbjct: 176 LYQTYHVLVGDLIKFSAETLSELIRT--TLDAEKVFT-QGLNILE--WLEN----PSNTP 226
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQYHLSPS 318
+ + S P + P IG ++Q+ + T + +P
Sbjct: 227 DKDYLLSI------PISC-PL-------IG----VIQLAHYVVT-AKLLGFTPG 261
Score = 41.6 bits (97), Expect = 3e-04
Identities = 53/372 (14%), Positives = 105/372 (28%), Gaps = 143/372 (38%)
Query: 57 GNEEEFLDIE----YKNTKT-KSFLELLLEIDHAADDKLTD-AEILPELTTLFFAALDTT 110
GN +++ + E Y+ T + L++ + + L++ + +F L+
Sbjct: 164 GNTDDYFE-ELRDLYQ---TYHVLVGDLIK---FSAETLSELIRTTLDAEKVFTQGLNIL 216
Query: 111 A---TANST---------------ILLL-LAMYPEVLQKIDGLYRP----ERYSNISTIS 147
++T I ++ LA Y V K+ G + P + S
Sbjct: 217 EWLENPSNTPDKDYLLSIPISCPLIGVIQLAHY-VVTAKLLG-FTPGELRSYLKGATGHS 274
Query: 148 SALFRLSAQNLRLMAYTDQRD----IVTDEIDSVF--GGPDEDDGRPPTPADLHSMNYLE 201
L ++A +A TD + V I +F G +
Sbjct: 275 QGL--VTA---VAIAETDSWESFFVSVRKAITVLFFIG--------------------VR 309
Query: 202 CVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHR----------NKN- 250
C E YP + +++ + S ML+I+ + + N +
Sbjct: 310 C--YEA---YPNTSLPPSILEDSLENNE----GVPSPMLSISNLTQEQVQDYVNKTNSHL 360
Query: 251 --------YWVN-PIQFI----PE----------RFHPDESVSSSHI--RQRHP---YAF 282
VN + P+ + + S I +R F
Sbjct: 361 PAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRF 420
Query: 283 IPFSAGPRNCIGQKYAMLQMKTVISTILRQYH-----LSPS----PRFQTI--------- 324
+P ++ P + + I + + P + T
Sbjct: 421 LPVAS-PFHS---HL----LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLS 472
Query: 325 ADIDKRIRMDIT 336
I +RI I
Sbjct: 473 GSISERIVDCII 484
Score = 35.8 bits (82), Expect = 0.025
Identities = 39/275 (14%), Positives = 69/275 (25%), Gaps = 120/275 (43%)
Query: 86 ADDKLTDA------EIL----PELTTLF-----------FAAL--DTTATANSTILLLLA 122
AD+ D +I+ LT F ++A+ +T +
Sbjct: 1649 ADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFK 1708
Query: 123 MYPEVLQKI------DGLYRPERYSN----ISTISSALFRLSAQNLRLMAYTDQRDIVTD 172
E L + ++ + A F L+ + ++
Sbjct: 1709 EINEHSTSYTFRSEKGLLSATQ---FTQPALTLMEKAAFED----LK------SKGLIPA 1755
Query: 173 EIDSVFGGPDEDDGRPPTPADLHSMN-Y--LECV-----IKETARLYPPAPIVF---RQV 221
D+ F G HS+ Y L + I+ + VF +
Sbjct: 1756 --DATFAG--------------HSLGEYAALASLADVMSIESLVEV------VFYRGMTM 1793
Query: 222 DEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERFHPDESVSS--SHIRQRHP 279
VP G S IA +NP + E++ + +R
Sbjct: 1794 QVAVPRD----ELGRSNYGMIA---------INPGRVAAS--FSQEALQYVVERVGKRTG 1838
Query: 280 -------YAFIPFSAGPRNCIGQKYAMLQMKTVIS 307
Y N Q+Y V +
Sbjct: 1839 WLVEIVNY----------NVENQQY-------VAA 1856
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 49.2 bits (118), Expect = 9e-07
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFH 264
ET R PP +V R +++ +G H +P G +++L +A HR +P P+RF
Sbjct: 295 ETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHR------DPTIVGAPDRFD 348
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
PD R + F G C+G A L+ + + ++
Sbjct: 349 PD----------RAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
Score = 31.9 bits (73), Expect = 0.35
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTA--TANSTILLLLAMYPEVLQK 130
+ D+LT+ EI+ L A +TT AN+ + +L P
Sbjct: 235 EESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAML--RTPGQWAA 281
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 48.4 bits (116), Expect = 2e-06
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFH 264
E R P RQ+D +V L L +++ +R +P ++ P+ F
Sbjct: 272 ECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR------DPRRYDRPDDFD 325
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+ R P + F AG R C+G A Q++ ++ + R
Sbjct: 326 IE----------RDPVPSMSFGAGMRYCLGSYLARTQLRAAVAALAR 362
Score = 32.2 bits (74), Expect = 0.26
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTA--TANSTILLL 120
++ EI+ + T F +T A N+ + LL
Sbjct: 215 RGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLL 250
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 48.4 bits (116), Expect = 2e-06
Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Query: 203 VIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
++E R P R EEV +G +P +++++ +R +P QF P
Sbjct: 277 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR------DPKQFPDPH 330
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
RF R + F G C+G+ A L+ + + +
Sbjct: 331 RFDVT----------RDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFG 370
Score = 33.0 bits (76), Expect = 0.14
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 79 LLEIDHAADDKLTDAEILPELTTLFFAALDTTA--TANSTILLL 120
L+ + D +L+ E+ L A + + T LLL
Sbjct: 215 LIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLL 258
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 48.4 bits (116), Expect = 2e-06
Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 79/229 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
+ L E++ L A +TT A + L L + PE+
Sbjct: 222 QLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTL------------IQHPEQI--- 266
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
+ D G V
Sbjct: 267 -----DVLL------------------------------RDPGAVSG------------V 279
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
++E R + + R E++ +G + AG +++++I ++R + + P+
Sbjct: 280 VEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR------DAKAYENPDI 333
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
F R+ + F G C+GQ A +++ + +
Sbjct: 334 FDAR----------RNARHHVGFGHGIHQCLGQNLARAELEIALGGLFA 372
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 48.0 bits (115), Expect = 2e-06
Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 79/231 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
+ ++T E + +L A LDTT
Sbjct: 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNG------------------------------ 259
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
I++A+ L + D+ + D
Sbjct: 260 --IAAAV-------YCLARFPDEFARLRA-----------DPSLARN------------A 287
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
+E R P FR +V L + G +++ + +R +P ++ P+R
Sbjct: 288 FEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR------DPRRWDDPDR 341
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+ R + F +G C+GQ A L+ + V++ + R+
Sbjct: 342 YDIT----------RKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKV 382
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 47.6 bits (114), Expect = 3e-06
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFH 264
E R+ PP R E+V +G ++ AG+ I I +R +P F P+ F
Sbjct: 272 EMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANR------DPEVFDDPDVFD 325
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR---QYHLSPSPRF 321
++S R+ + F GP +C GQ + + TV + + + L+ P
Sbjct: 326 HTRPPAAS----RN----LSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEEPTV 377
Score = 31.4 bits (72), Expect = 0.46
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQK 130
++T++E + + + ++ + L A PEV
Sbjct: 215 AGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTA 258
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 47.6 bits (114), Expect = 3e-06
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFH 264
E R PP V R E++ LG H +P G+ ++ + +R +P +F P+
Sbjct: 293 ELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR------DPARFPDPDVLD 346
Query: 265 PDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
R + F G C+G A + + + +L
Sbjct: 347 VH----------RAAERQVGFGLGIHYCLGATLARAEAEIGLRALLD 383
Score = 31.9 bits (73), Expect = 0.32
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTA--TANSTILLL 120
L+ I+ L A +TT A + + L
Sbjct: 233 RDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLR 271
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 47.2 bits (113), Expect = 4e-06
Identities = 36/234 (15%), Positives = 65/234 (27%), Gaps = 83/234 (35%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
+ID + L++ +++ T L +D TA S++ LA
Sbjct: 211 KID---GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDI--------------- 252
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
+ R + P
Sbjct: 253 ------------------------ELRRRLIA-----------HPELIPN---------- 267
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI- 259
+ E R Y PA + R V +EV +G + G + ML R + F
Sbjct: 268 --AVDELLRFYGPAMV-GRLVTQEVTVGDITMKPGQTAMLWFPIASR------DRSAFDS 318
Query: 260 PERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
P+ + R P + G C+G ++ + I+ L++
Sbjct: 319 PDNIVIE----------RTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 47.3 bits (113), Expect = 4e-06
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI--PE 261
++E RL P + R +V +G +PAG ++L +R + Q+
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR------DERQYGPDAA 340
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R P + FS G +C+G A +Q + ++ +L +
Sbjct: 341 ELDVT----------RCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARC 382
Score = 34.9 bits (81), Expect = 0.033
Identities = 9/44 (20%), Positives = 13/44 (29%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQK 130
D IL T+ DT + LL P+ +
Sbjct: 232 GDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRL 275
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 47.3 bits (113), Expect = 4e-06
Identities = 36/231 (15%), Positives = 62/231 (26%), Gaps = 77/231 (33%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
L D E T L A TT
Sbjct: 220 EVDGRALDDEEAANFSTALLLAGHITTT-------------------------------- 247
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
+ + + L + D + D GR P +
Sbjct: 248 VLLGNIV-------RTLDEHPAHWDAAAE-----------DPGRIPA------------I 277
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
++E R PP P + R + + +PA + + +R + P+R
Sbjct: 278 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR------DSDAHDDPDR 331
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
F P R+ A + F G C+G A L+ + + I+ ++
Sbjct: 332 FDPS--------RKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 46.5 bits (111), Expect = 8e-06
Identities = 43/231 (18%), Positives = 75/231 (32%), Gaps = 80/231 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
D LTDAEI+ L + A +TT + L++ A+
Sbjct: 221 SENGDHLTDAEIVSTLQLMVAAGHETTIS-----LIVNAVV------------------- 256
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
L + +QR +V A+ + V
Sbjct: 257 -----NLST----------HPEQRALVLSG-----------------EAEWSA------V 278
Query: 204 IKETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI--P 260
++ET R P V R E+VP+G V+PAG +++++ + R+
Sbjct: 279 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD------ERAHGPTA 332
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+RF + + HI F GP C G + ++ + +
Sbjct: 333 DRFDLTRTSGNRHI---------SFGHGPHVCPGAALSRMEAGVALPALYA 374
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 46.2 bits (110), Expect = 8e-06
Identities = 41/230 (17%), Positives = 69/230 (30%), Gaps = 79/230 (34%)
Query: 85 AADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNIS 144
DD LT ++L + +TT A + + LA P +L
Sbjct: 234 VTDDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTA-------------- 279
Query: 145 TISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECVI 204
LR + T V+
Sbjct: 280 -------------LR-----------------------DGSADVDT------------VV 291
Query: 205 KETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERF 263
+E R PA V R +V + LP+G ++ + +R +P +F P+ F
Sbjct: 292 EEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANR------DPAEFDDPDTF 345
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
P R P I F G +C+G A +++ V+ + +
Sbjct: 346 LPG----------RKPNRHITFGHGMHHCLGSALARIELSVVLRVLAERV 385
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 46.1 bits (110), Expect = 9e-06
Identities = 36/228 (15%), Positives = 63/228 (27%), Gaps = 76/228 (33%)
Query: 86 ADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNIST 145
A +T E L + L DTT + + +L L P
Sbjct: 246 ATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP-------------------- 285
Query: 146 ISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECVIK 205
DQ + + T
Sbjct: 286 -------------------DQFAKLKA-----------NPALVETMVP------------ 303
Query: 206 ETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERFHP 265
E R P + R + LG + G +++ +R+ P +FI +R P
Sbjct: 304 EIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP 363
Query: 266 DESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
+H + F G C+G + A +Q++ + IL ++
Sbjct: 364 R----------QH----LSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 45.3 bits (108), Expect = 2e-05
Identities = 32/229 (13%), Positives = 50/229 (21%), Gaps = 78/229 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
T E L F LDT A
Sbjct: 213 PVGGRPWTVDEARRMCRNLLFGGLDTVA-------------------------------- 240
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
+ I L L + + + ++ + P
Sbjct: 241 AMIGMVA-------LHLARHPEDQRLLRE-----------RPDLIPA------------A 270
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERF 263
E R YP V R +V + G + L + + P F
Sbjct: 271 ADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLD-----------PASF 318
Query: 264 -HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
P+E R P G C+G A +++ + L
Sbjct: 319 EAPEEVRFD---RGLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLG 364
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 45.3 bits (108), Expect = 2e-05
Identities = 25/123 (20%), Positives = 39/123 (31%), Gaps = 21/123 (17%)
Query: 206 ETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERF 263
E R I R +++ + G + L I R + F P+ F
Sbjct: 293 EVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALR------DGTVFSRPDVF 346
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR---QYHLSPSPR 320
R A + + GP C G A L+ + + TI R + L +P
Sbjct: 347 DVR----------RDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPV 396
Query: 321 FQT 323
F
Sbjct: 397 FGY 399
Score = 31.5 bits (72), Expect = 0.39
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTA--TANSTILLLLAMYPEVLQK 130
A +L+ E++ + + A DTT A + + LL PE L+
Sbjct: 233 EADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLL--RSPEALEL 279
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 44.9 bits (107), Expect = 2e-05
Identities = 34/237 (14%), Positives = 63/237 (26%), Gaps = 79/237 (33%)
Query: 77 ELLLEIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYR 136
EL A ++D T F A + +T + +T L+ L + R
Sbjct: 205 ELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISL------------IQR 252
Query: 137 PERYSNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHS 196
P+ L E P
Sbjct: 253 PQLR--------NLLH------------------------------EKPELIPA------ 268
Query: 197 MNYLECVIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNP 255
++E R+ + R ++ +G ++ G +++ + G + + P
Sbjct: 269 ------GVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD------P 316
Query: 256 IQFI-PERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
F P D +SH+ F G C G + I +L+
Sbjct: 317 EHFPNPGSIELDRPNPTSHL---------AFGRGQHFCPGSALGRRHAQIGIEALLK 364
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 45.0 bits (107), Expect = 3e-05
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 203 VIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-P 260
++E R P +R E V L V+PAG ++++ +A HR P +F P
Sbjct: 299 AVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR------TPERFPDP 352
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
RF R + F G CIG A L+ + + +L
Sbjct: 353 HRFDIR----------RDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE 393
Score = 31.9 bits (73), Expect = 0.33
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 79 LLEIDHAADDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
L+ +LT E+L L A +TT AN LL
Sbjct: 237 LVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALL 280
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 44.6 bits (106), Expect = 3e-05
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 17/108 (15%)
Query: 206 ETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERF- 263
E R P P+ R E+ + +P G + + HR+ P F
Sbjct: 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRD-----------PRVFA 340
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
D I + I F GP C+G A L++ ++ +
Sbjct: 341 DADRF----DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALAT 384
Score = 32.2 bits (74), Expect = 0.22
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
D L D E+ + T+ A +TT A +
Sbjct: 235 DGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFA 270
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 44.5 bits (106), Expect = 3e-05
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 18/111 (16%)
Query: 203 VIKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-P 260
++E R P R E+V +PAG +ML +A +R + P
Sbjct: 272 AVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR------DADWMPEP 325
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+R R + F G C+G + A L+ + I +
Sbjct: 326 DRLDIT----------RDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFA 366
Score = 32.2 bits (74), Expect = 0.22
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 79 LLEIDHAADDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
LL + D+L+ E++ L A +TT N + LL
Sbjct: 210 LLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALL 253
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 44.2 bits (105), Expect = 3e-05
Identities = 34/230 (14%), Positives = 60/230 (26%), Gaps = 80/230 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
D TD E+ + A D + +L + L PE+
Sbjct: 215 AEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAM------------LRHPEQI--- 259
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
FR D+
Sbjct: 260 -----DAFR------------------------------GDEQSAQR------------A 272
Query: 204 IKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
+ E R R E++ L + G S++ ++ +R +P +
Sbjct: 273 VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANR------DPALAPDVD 326
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
R R P + F G +C+G A L+++TV + + R
Sbjct: 327 RLDVT----------REPIPHVAFGHGVHHCLGAALARLELRTVFTELWR 366
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 43.8 bits (104), Expect = 4e-05
Identities = 39/234 (16%), Positives = 67/234 (28%), Gaps = 82/234 (35%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
E+D ++L+D E++ E + +TT S L
Sbjct: 209 EVD---GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNR--------------- 250
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
DQ D++ D P
Sbjct: 251 ------------------------DQWDLLQ-----------RDPSLLPG---------- 265
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI- 259
I+E R P + R + + L AG +ML + + F
Sbjct: 266 --AIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANF------DEAVFCE 317
Query: 260 PERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
PE+F R+P + + F G C+G + A L++ + +LR+
Sbjct: 318 PEKFDVQ----------RNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRL 361
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 43.7 bits (104), Expect = 5e-05
Identities = 31/229 (13%), Positives = 58/229 (25%), Gaps = 83/229 (36%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
+++D E+ A + A + +LLL + P++
Sbjct: 205 REHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLL------------VTHPDQM--- 249
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
AL R E +
Sbjct: 250 -----ALLR------------------------------EKPELIDS------------A 262
Query: 204 IKETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPER 262
+E R R +V + + AG + ++ +R P +R
Sbjct: 263 TEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR------AP----GDR 312
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
F R + F G +CIG A LQ++ + ++
Sbjct: 313 FDIT----------REKATHMAFGHGIHHCIGAPLARLQLRVALPAVVG 351
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 43.8 bits (104), Expect = 5e-05
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 206 ETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERF 263
E R + + + R E+V +G ++ A I+ + +R + F P+ F
Sbjct: 279 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANR------DEEVFENPDEF 332
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+ + R+ P + F G CI + A ++ TV ST+ +
Sbjct: 333 NMN--------RKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQ 372
Score = 32.6 bits (75), Expect = 0.17
Identities = 5/39 (12%), Positives = 9/39 (23%), Gaps = 2/39 (5%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
+ ++ + L A T A L
Sbjct: 219 QVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLA 257
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 43.8 bits (104), Expect = 5e-05
Identities = 46/231 (19%), Positives = 71/231 (30%), Gaps = 80/231 (34%)
Query: 83 DHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSN 142
DH +T ++L L A +TT + + LLL L RPE
Sbjct: 227 DHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLL------------LDRPELP-- 272
Query: 143 ISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLEC 202
A R +D P
Sbjct: 273 ------AELR------------------------------KDPDLMPA------------ 284
Query: 203 VIKETARLYPPAPIV-FRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-P 260
+ E R+ A + R E++ L +PA ++ +AG + +P QF P
Sbjct: 285 AVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANH------DPEQFDDP 338
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
ER R + F G C+GQ A L+++ + T+LR
Sbjct: 339 ERVDFH----------RTDNHHVAFGYGVHQCVGQHLARLELEVALETLLR 379
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 43.8 bits (104), Expect = 6e-05
Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 80/230 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
+ L A ++ L A +TTA S ++ L L PE+
Sbjct: 224 QRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGL------------LSHPEQL--- 268
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
+ + + GR P
Sbjct: 269 -----TVVK------------------------------ANPGRTPM------------A 281
Query: 204 IKETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
++E R + A V R E+V +G + AG +++++ + +P F P
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANW------DPAVFKDPA 335
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+ R + F GP C+GQ A ++++ V T+ R
Sbjct: 336 VLDVE----------RGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFR 375
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 43.4 bits (103), Expect = 7e-05
Identities = 33/230 (14%), Positives = 59/230 (25%), Gaps = 80/230 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
D +TD E+ T L ++T A +L L L P +
Sbjct: 224 RDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLAL------------LDNPGQI--- 268
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
L E + V
Sbjct: 269 -----ELLF------------------------------ESPEKAER------------V 281
Query: 204 IKETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
+ E R P R ++V + ++ AG ++ +I +R + P+
Sbjct: 282 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANR------DEALTPDPD 335
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+ R + + F G C+G A ++ T+ R
Sbjct: 336 VLDAN----------RAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWR 375
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 43.4 bits (103), Expect = 7e-05
Identities = 36/231 (15%), Positives = 66/231 (28%), Gaps = 81/231 (35%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
D L++ E+L L A ++T T + + LL + RPE
Sbjct: 233 RDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLL------------MTRPELR--- 277
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
+ P+
Sbjct: 278 -----RQLL------------------------------DRPELIPS------------A 290
Query: 204 IKETARLYPPAP--IVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-P 260
++E R P R E+V L + AG ++ + +R+ QF
Sbjct: 291 VEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRD------QAQFPDA 344
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+R D R P + F G +C+G A ++++ + +L+
Sbjct: 345 DRIDVD----------RTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ 385
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 43.0 bits (102), Expect = 8e-05
Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
Query: 206 ETARLYPPAPIVF-RQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERF 263
E R A I R ++ + ++ AG +++ + +R + + P+
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANR------DGTVYEDPDAL 336
Query: 264 HPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
R + F G C+GQ A L+++ +++ ++
Sbjct: 337 DIH----------RSARHHLAFGFGVHQCLGQNLARLELEVILNALMD 374
Score = 33.4 bits (77), Expect = 0.092
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 83 DHAADDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
D A+ ++ E++ L A +TTA+ + S I LL
Sbjct: 222 DQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLL 261
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 43.1 bits (102), Expect = 9e-05
Identities = 30/243 (12%), Positives = 57/243 (23%), Gaps = 86/243 (35%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
EID + D L ++ L LDT
Sbjct: 235 EID---GKPMPDDRALGLVSLLLLGGLDTVV----------------------------- 262
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
+ + + + L + + + + +
Sbjct: 263 ---NFLGFMM-------IYLSRHPETVAEMR-----------REPLKLQR---------- 291
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI- 259
++E R + R V ++ +L G I+L A +
Sbjct: 292 --GVEELFRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGLD------DRHHDD 342
Query: 260 PERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQ---YHLS 316
P R F+ GP C G A L++ ++ L + + L
Sbjct: 343 PMTVDLS----------RRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLK 392
Query: 317 PSP 319
Sbjct: 393 DRA 395
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 43.0 bits (102), Expect = 9e-05
Identities = 43/230 (18%), Positives = 63/230 (27%), Gaps = 80/230 (34%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNI 143
D + D ++ TL AA DTTA LL L P++
Sbjct: 216 EDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALL------------LDSPDQL--- 260
Query: 144 STISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECV 203
AL R ED
Sbjct: 261 -----ALLR------------------------------EDPSLVGN------------A 273
Query: 204 IKETARLYPPAPI-VFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PE 261
++E R R +V LG + G ++ + +P PE
Sbjct: 274 VEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADF------DPAFVEEPE 327
Query: 262 RFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
RF R P + F G CIGQ+ A ++++ V T+ R
Sbjct: 328 RFDIT----------RRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFR 367
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 42.6 bits (101), Expect = 1e-04
Identities = 35/229 (15%), Positives = 63/229 (27%), Gaps = 81/229 (35%)
Query: 86 ADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNIST 145
D +LT+ + L FA LD+ A+ ++LL P++
Sbjct: 222 NDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLL------------AAHPDQR----- 264
Query: 146 ISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECVIK 205
A D ++
Sbjct: 265 ---AAAL------------------------------ADPDVMAR------------AVE 279
Query: 206 ETARLYPPA--PIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
E R + R E++ G + AG ++ + + + F PE
Sbjct: 280 EVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFD------ERAFTGPEE 333
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
F R P + F G +CIG A L+++T+ + +
Sbjct: 334 FDAA----------RTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLFT 372
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 42.6 bits (101), Expect = 1e-04
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Query: 206 ETARLYPPAPIV--FRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
E R P V R E+V + + AG ++ ++ +R+ P F P+R
Sbjct: 280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRD------PEVFPDPDR 333
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
+ R P + F GP C G A L+ + ++ +L
Sbjct: 334 IDFE----------RSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLD 372
Score = 29.1 bits (66), Expect = 2.3
Identities = 8/40 (20%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 82 IDHAADDKLTDAEILPELTTLFFAALDTTAT-ANSTILLL 120
D++T +E + L T LLL
Sbjct: 219 GAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLL 258
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 42.3 bits (100), Expect = 1e-04
Identities = 28/228 (12%), Positives = 48/228 (21%), Gaps = 80/228 (35%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNISTI 146
+T E L LDT + +
Sbjct: 231 GRPITSDEAKRMCGLLLVGGLDTVV--------------------------------NFL 258
Query: 147 SSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECVIKE 206
S ++ L + R + E R P +E
Sbjct: 259 SFSM-------EFLAKSPEHRQELI-----------ERPERIPA------------ACEE 288
Query: 207 TARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFHP 265
R + R + + L G I+L + + P
Sbjct: 289 LLRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGL------DERENACPMHVDF 341
Query: 266 DESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R + F G C+GQ A ++ + L +
Sbjct: 342 S----------RQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI 379
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 41.9 bits (99), Expect = 2e-04
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 19/109 (17%)
Query: 206 ETARLYPPAPIV--FRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
E R V R E+V + + AG + ++ +R+ P F P+R
Sbjct: 283 ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRD------PDVFPDPDR 336
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
D R P + + G C G A +Q + ++ T+L
Sbjct: 337 IDLD----------RDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLE 375
Score = 31.1 bits (71), Expect = 0.47
Identities = 6/40 (15%), Positives = 10/40 (25%), Gaps = 1/40 (2%)
Query: 82 IDHAADDKLTDAEILPELTTLFFAALDTTAT-ANSTILLL 120
++ + E + L T LLL
Sbjct: 222 GAAVGRGEVGETEAVGLAGPLQIGGEAVTHNVGQMLYLLL 261
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 41.0 bits (97), Expect = 3e-04
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 204 IKETARLYPPAP-IVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIPER 262
++ET R Y P + R E+ + + G +++ + +R++ ++ P F R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R+ H + F G C+G A L+ ++ IL +
Sbjct: 282 ------------REMH----LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
Score = 33.3 bits (77), Expect = 0.096
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 84 HAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQK 130
+ KLT E + + L +TT ++ ++ P+++
Sbjct: 167 SLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDD 213
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 41.0 bits (97), Expect = 3e-04
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 20/124 (16%)
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
++E R PP R E+V + V+ G + + IA +R + F P+
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANR------DEEVFKDPDS 297
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY---HLSPSP 319
F PD R P + F +G C+G A L+ + + +++ +
Sbjct: 298 FIPD----------RTPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKE 347
Query: 320 RFQT 323
+
Sbjct: 348 KIDN 351
Score = 28.3 bits (64), Expect = 4.2
Identities = 8/41 (19%), Positives = 14/41 (34%)
Query: 86 ADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPE 126
A+ L++ E L A +TT + +Y
Sbjct: 191 ANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNS 231
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 39.9 bits (94), Expect = 0.001
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 204 IKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PER 262
I+E R PP R+ E V LG + G + + IA +R + F E+
Sbjct: 244 IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR------DEEVFHDGEK 297
Query: 263 FHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
F PD R+P + F +G C+G A L+ + I +++
Sbjct: 298 FIPD----------RNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Score = 27.5 bits (62), Expect = 7.7
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 86 ADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPE 126
+ L+D E L + L A +TT S ++ +
Sbjct: 190 VNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNL 230
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 38.8 bits (91), Expect = 0.002
Identities = 26/226 (11%), Positives = 53/226 (23%), Gaps = 80/226 (35%)
Query: 87 DDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNISTI 146
+++ + ++ L LDT + +
Sbjct: 237 GERIAHDKAQGLISLLLLGGLDTVV--------------------------------NFL 264
Query: 147 SSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYLECVIKE 206
S + + L + + + D + +E
Sbjct: 265 SFFM-------IHLARHPELVAELR-----------SDPLKLMR------------GAEE 294
Query: 207 TARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI-PERFHP 265
R +P R V ++ L G I+L A + P +
Sbjct: 295 MFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGL------DDAANPEPWKLDF 347
Query: 266 DESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILR 311
R + F GP C G A +++ + L+
Sbjct: 348 S----------RRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLK 383
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 38.4 bits (90), Expect = 0.003
Identities = 39/233 (16%), Positives = 68/233 (29%), Gaps = 80/233 (34%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
++D + + D I + A DTT++++ ++ L+ P
Sbjct: 246 KLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP--------------- 287
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
+Q + D P D
Sbjct: 288 ------------------------EQLALAK-----------SDPALIPRLVD------- 305
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIP 260
E R P R + + + G IML+ +R++ + NP +F
Sbjct: 306 -----EAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDI 360
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R P+ RH + F G C+GQ A L+MK +L +
Sbjct: 361 TR-FPN----------RH----LGFGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 38.1 bits (89), Expect = 0.004
Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 78/233 (33%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
E+D ++L+ EI L A +TT A + +L L+ YP
Sbjct: 253 EVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYP--------------- 294
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
+QRD + D +
Sbjct: 295 ------------------------EQRDRWWSDFDGLAPT-------------------- 310
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIP 260
++E R P + R + +++ L + AG + L +R+++ + +P F
Sbjct: 311 --AVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDL 368
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R +P + H+ F G C+G A +++ + RQ
Sbjct: 369 AR-NP-----NPHL------GFGGG--GAHFCLGANLARREIRVAFDELRRQM 407
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 36.2 bits (84), Expect = 0.013
Identities = 38/234 (16%), Positives = 65/234 (27%), Gaps = 82/234 (35%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
+D + ++D + A DTT+ +++ L LA P
Sbjct: 268 VVD---GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDP--------------- 309
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
D V + L +
Sbjct: 310 ------------------------DLFARVKAD-----------------RNLLPGI--- 325
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFI- 259
++E R P R + L + AG +ML + + P QF
Sbjct: 326 ---VEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHD------PAQFPE 376
Query: 260 PERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
P +F P R + F AG C+G A L+M+ ++ +L +
Sbjct: 377 PRKFDPT----------RPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV 420
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 36.1 bits (84), Expect = 0.014
Identities = 34/233 (14%), Positives = 64/233 (27%), Gaps = 81/233 (34%)
Query: 81 EIDHAADDKLTDAEILPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERY 140
+ID +KL+D E + L A +TT + + ++ A +P
Sbjct: 247 DID---GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP--------------- 288
Query: 141 SNISTISSALFRLSAQNLRLMAYTDQRDIVTDEIDSVFGGPDEDDGRPPTPADLHSMNYL 200
DQ ++ RP T
Sbjct: 289 ------------------------DQWELY-------------KKVRPET---------- 301
Query: 201 ECVIKETARLYPPAPIVFRQVDEEVPLGRHVLPAGASIMLTIAGIHRNKNYWVNPIQFIP 260
E R P R + L + G +++ + ++ + +P F
Sbjct: 302 --AADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNI 359
Query: 261 ERFHPDESVSSSHIRQRHPYAFIPFSAGPRNCIGQKYAMLQMKTVISTILRQY 313
R +P+ H+ F G CIG A + + + + +
Sbjct: 360 LR-NPN-----PHV------GFGGT--GAHYCIGANLARMTINLIFNAVADHM 398
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 34.4 bits (78), Expect = 0.031
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 12/54 (22%)
Query: 17 IKRQDHEEKE------LQKAKGMDENNNKIDTKDDKNKDLKINSENGN-EEEFL 63
++ D K + K ++E N + + +KNK N ++ F
Sbjct: 98 LQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNK-----INNRIADKAFY 146
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 31.5 bits (72), Expect = 0.40
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 83 DHAADDKLTDAEILPELTTLFFAALDTTAT--ANSTILLL 120
D D+L+ E+ L + A +TT + LL
Sbjct: 220 DEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLL 259
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.4 bits (70), Expect = 0.49
Identities = 61/401 (15%), Positives = 113/401 (28%), Gaps = 154/401 (38%)
Query: 48 KDLKINSENGNEEEFLDIEYKNTKTKSFLELLL------------EIDHAADDKLTDAEI 95
K+ + + +L+++ N+ ++ LE+L DH+++ KL I
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNS-PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 96 LPELTTLFFAALDTTATANSTILLLLAMYPEVLQKIDGLYRPERYSNISTISSALFRLSA 155
EL L Y L + + + ++ F LS
Sbjct: 231 QAELRRLLK----------------SKPYENCLLVLLNVQNAK------AWNA--FNLSC 266
Query: 156 QNLRLMAYTDQRDI-VTDEIDSVFGG--PDEDDGRPPTPADLHSM--NYLECVIKETARL 210
+++ T R VTD + + + TP ++ S+ YL+C ++ L
Sbjct: 267 ---KILLTT--RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD---L 318
Query: 211 YPP-----APIV-----------------FRQVDE--------------EVPLGRH---- 230
P P ++ V+ E R
Sbjct: 319 -PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 231 --VLPAGASIMLTIAGIHRNKNYWVNPIQFIPERF------------HPDESVSSSH--- 273
V P A I + + W + I+ P ES S
Sbjct: 378 LSVFPPSAHIPTILLSL-----IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 274 ---------IRQRHPYAFIPFSAGPRNCIGQKYAMLQ---MKTVISTILRQY-------H 314
H R+ + Y + + +I L QY H
Sbjct: 433 LELKVKLENEYALH-----------RSIV-DHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480
Query: 315 LSPSPRFQTIA-------D---IDKRIRMDITLRMEDGAVI 345
L + + D ++++IR D T G+++
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET:
PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB:
1et0_A* 1i2l_A*
Length = 269
Score = 27.9 bits (63), Expect = 4.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 186 GRPPTPADLHSMNYLECV 203
GR P A + +N LE V
Sbjct: 131 GRNPHLAGIKHLNRLEQV 148
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll,
selenomethionine; 1.90A {Xanthomonas citri} SCOP:
b.18.1.13 c.69.1.21
Length = 615
Score = 27.4 bits (60), Expect = 7.7
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 230 HVLPAGASIMLTIAGIHRNKNYWVNPIQFIPERFHPDES 268
H G +M+ + Y NP ++P F
Sbjct: 554 HTFQPGHRVMVQVQSSLFPL-YDRNPQTYVPNIFFAKPG 591
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA
structural genomics center for infectious disease,
adenine; HET: ADE; 2.05A {Brucella melitensis biovar
abortus}
Length = 356
Score = 27.4 bits (61), Expect = 7.8
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 10/48 (20%)
Query: 166 QRDIVTDEIDSVFGGPDED--------DGRPPTPADLHSMNYL-ECVI 204
+ I + E++ F GP + G L MN+ V
Sbjct: 305 EARIKSGELN-PFTGPIKKQDGSEWLKAGEKADDQTLLGMNFYVAGVD 351
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR
repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1
d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Length = 457
Score = 27.3 bits (60), Expect = 9.7
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 3 AKQELYSFIQNVVAIKRQDHEEKELQKAKGMDENNNKIDTKDDKNKDLKINSENGNEEEF 62
A+ ++ ++ K ++H E++ + M + + D K++ NK + + G E
Sbjct: 387 ARLQI-----SMCQKKAKEHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEK 441
Query: 63 LDIEYKNTKTK 73
+ K
Sbjct: 442 GTDSQAMEEEK 452
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.384
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,375,869
Number of extensions: 330471
Number of successful extensions: 872
Number of sequences better than 10.0: 1
Number of HSP's gapped: 773
Number of HSP's successfully gapped: 162
Length of query: 351
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 257
Effective length of database: 4,077,219
Effective search space: 1047845283
Effective search space used: 1047845283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.1 bits)