BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6593
(433 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/247 (57%), Positives = 176/247 (71%), Gaps = 10/247 (4%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V V+R L H NV++FIGVLYKD++LN +TEYI GGTL+ +++ PW QRV+FA+D
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA-KVPXX 266
IA+GM YLHSMN+IHRDLNS NCLVRE+K VVVADFGLAR++ P + + K P
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP-- 174
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
YTVVGNPYWMAPEM+ G+ YDE VDVFS+GIVLCEIIGRV ADPDYLPR
Sbjct: 175 ------DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPR 228
Query: 327 SPDFGLDQTDFRNKFC-ASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDK 385
+ DFGL+ F +++C +CP F I CCDL+P++RP F LE WLE L MHL+
Sbjct: 229 TMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHL 288
Query: 386 PLPSDLE 392
PL LE
Sbjct: 289 PLGPQLE 295
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
G+ ++ HHN+IR GV+ K + + ++TEY+ G L + L++ Q V
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVP 264
R IAAGM YL +MN +HRDL ++N LV + V+DFGL+R++ P A TT K+P
Sbjct: 154 RGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
W APE ++ +++ DV+S+GIV+ E++ L
Sbjct: 214 IR-------------------WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
FR CP ++ C +RP F
Sbjct: 255 SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKF 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 99/170 (58%), Gaps = 25/170 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG--QPLPWGQRVNFA 205
+VA+++ L H N++ F+G + + L++VTEY++ G+L LL G + L +R++ A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 206 RDIAAGMTYLHSMN--LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
D+A GM YLH+ N ++HR+L S N LV + TV V DFGL+R+ +A T + +K
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-----KASTFLSSK- 197
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+ G P WMAPE++ + +E DV+S+G++L E+
Sbjct: 198 ---------------SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 25/170 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG--QPLPWGQRVNFA 205
+VA+++ L H N++ F+G + + L++VTEY++ G+L LL G + L +R++ A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 206 RDIAAGMTYLHSMN--LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
D+A GM YLH+ N ++HRDL S N LV + TV V DFGL+R+ +A + +K
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-----KASXFLXSK- 197
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
G P WMAPE++ + +E DV+S+G++L E+
Sbjct: 198 ---------------XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGLAR++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 186 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 222
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 142
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 203 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 239
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 240 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 152
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 213 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 249
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 250 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 346
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 347 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 386
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 387 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 346
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 347 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 386
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 387 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 121 WYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRS-LHHHNVIRFIGVLYKDRKLNLVTEY 179
W ++ + + D + + +N Q A L + L H N+I GV K+ L LV E+
Sbjct: 28 WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87
Query: 180 IAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHS---MNLIHRDLNSQNCLVRE-- 234
GG L +L G+ +P VN+A IA GM YLH + +IHRDL S N L+ +
Sbjct: 88 ARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145
Query: 235 ------DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMA 288
+K + + DFGLAR H+ TT M + G WMA
Sbjct: 146 ENGDLSNKILKITDFGLAREWHR-----TTKM------------------SAAGAYAWMA 182
Query: 289 PEMMTGQEYDETVDVFSYGIVLCEII-GRVP-ADPDYLPRSPDFGLDQTDFRNKFCASCP 346
PE++ + + DV+SYG++L E++ G VP D L + +G+ ++CP
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA--YGVAMNKLALPIPSTCP 240
Query: 347 EPFVRIAFLCCDLNPDQRPPF 367
EPF ++ C + +P RP F
Sbjct: 241 EPFAKLMEDCWNPDPHSRPSF 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 312 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIK 429
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 430 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 469
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 470 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 53 EAQVMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EXTARQGAKFPIK 170
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 171 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 210
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 211 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 56 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 173
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 174 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 213
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 214 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 45/275 (16%)
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRK-L 173
DVML ++ K + K D A + +V+ L H N+++ +GV+ +++ L
Sbjct: 36 DVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 90
Query: 174 NLVTEYIAGGTLKELLQDPGQPLPWGQ-RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
+VTEY+A G+L + L+ G+ + G + F+ D+ M YL N +HRDL ++N LV
Sbjct: 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 150
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
ED V+DFGL + + T K+P W APE +
Sbjct: 151 SEDNVAKVSDFGLTK-----EASSTQDTGKLPVK-------------------WTAPEAL 186
Query: 293 TGQEYDETVDVFSYGIVLCEI--IGRVPAD----PDYLPR-SPDFGLDQTDFRNKFCASC 345
+++ DV+S+GI+L EI GRVP D +PR + +D D C
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-------GC 239
Query: 346 PEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
P + C L+ RP F L LE + H
Sbjct: 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 54 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 171
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 172 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 211
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 212 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 52 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 110
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 169
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 170 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 209
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 210 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 45/275 (16%)
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRK-L 173
DVML ++ K + K D A + +V+ L H N+++ +GV+ +++ L
Sbjct: 21 DVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75
Query: 174 NLVTEYIAGGTLKELLQDPGQPLPWGQ-RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
+VTEY+A G+L + L+ G+ + G + F+ D+ M YL N +HRDL ++N LV
Sbjct: 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 135
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
ED V+DFGL + + T K+P W APE +
Sbjct: 136 SEDNVAKVSDFGLTK-----EASSTQDTGKLPVK-------------------WTAPEAL 171
Query: 293 TGQEYDETVDVFSYGIVLCEI--IGRVPAD----PDYLPR-SPDFGLDQTDFRNKFCASC 345
+++ DV+S+GI+L EI GRVP D +PR + +D D C
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-------GC 224
Query: 346 PEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
P + C L+ RP F L LE + H
Sbjct: 225 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 45/275 (16%)
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRK-L 173
DVML ++ K + K D A + +V+ L H N+++ +GV+ +++ L
Sbjct: 208 DVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 262
Query: 174 NLVTEYIAGGTLKELLQDPGQPLPWGQ-RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
+VTEY+A G+L + L+ G+ + G + F+ D+ M YL N +HRDL ++N LV
Sbjct: 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 322
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
ED V+DFGL + + T K+P W APE +
Sbjct: 323 SEDNVAKVSDFGLTK-----EASSTQDTGKLPVK-------------------WTAPEAL 358
Query: 293 TGQEYDETVDVFSYGIVLCEI--IGRVPAD----PDYLPR-SPDFGLDQTDFRNKFCASC 345
+++ DV+S+GI+L EI GRVP D +PR + +D D C
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-------GC 411
Query: 346 PEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
P + C L+ RP F L LE + H
Sbjct: 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V R
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 186 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 222
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 55/309 (17%)
Query: 113 ACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNC------------------------GQ 148
A D D W E+ + + G+YGE + +
Sbjct: 2 AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN----- 203
AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLL 116
Query: 204 -FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAK 175
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPD 322
P W APE + ++ DV+++G++L EI +
Sbjct: 176 FPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 216
Query: 323 YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLS 382
+ S + L + D+R + CPE + C NP RP F + E + S
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 383 VDKPLPSDL 391
+ + +L
Sbjct: 277 ISDEVEKEL 285
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 230 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGL R+I AK P
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ-GAKFPIK 347
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 348 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 387
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 388 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNF 204
+ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G P + ++F
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ IA GM ++ N IHRDL + N LV +ADFGLAR+I AK P
Sbjct: 290 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE-GAKFP 348
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 349 IK-------------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
++P+ + R+ + G +R +CPE I C P++RP FE ++
Sbjct: 390 SNPEVI-RALERG-----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 436
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ + H +++ V+ + + +VTEY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+VAVLR H N++ F+G + KD L +VT++ G +L + L Q ++ AR
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ N+IHRD+ S N + E TV + DFGLA + R + + P
Sbjct: 141 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV---KSRWSGSQQVEQP--- 194
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVP----A 319
G+ WMAPE++ Q+ + DV+SYGIVL E++ G +P
Sbjct: 195 -------------TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D + G D +K +CP+ R+ C ++RP F
Sbjct: 242 NRDQIIFMVGRGYASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLF 288
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 118 LDNWYFEKDGLLFCKEDYNGKYGEACQNC------------------------GQVAVLR 153
LD W E+ + + G+YGE + + AV++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 154 SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGM 212
+ H N+++ +GV ++ ++TE++ G L + L++ Q + + A I++ M
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXX 272
YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIK------ 175
Query: 273 XXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVP---ADPDYLPRS 327
W APE + ++ DV+++G++L EI G P DP S
Sbjct: 176 -------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-----S 217
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKPL 387
+ L + D+R + CPE + C NP RP F + E + S+ +
Sbjct: 218 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
Query: 388 PSDL 391
+L
Sbjct: 278 EKEL 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNF 204
+ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G P + ++F
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 116
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ IA GM ++ N IHRDL + N LV +ADFGLAR+I AK P
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE-GAKFP 175
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 176 IK-------------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 216
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
++P+ + R+ + G +R +CPE I C P++RP FE ++
Sbjct: 217 SNPEVI-RALERG-----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V+ A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 346
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 347 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 386
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 387 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+IR GV+ K + + +VTE + G+L L+ Q V R
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
IA+GM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY 323
W +PE + +++ DV+SYGIVL E++ G P Y
Sbjct: 215 R-------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----Y 251
Query: 324 LPRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
S + D +R CP ++ C + + RP FE + L+ L
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 115
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 174
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 175 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 216 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 276 SISDEVEKEL 285
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 126
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 127 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 185
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 186 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 227 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 287 SISDEVEKEL 296
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY++ G L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 118
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 178 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 219 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 279 SISDEVEKEL 288
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 115
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGA 174
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 175 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 216 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 276 SISDEVEKEL 285
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 114
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGA 173
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 174 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 215 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 275 SISDEVEKEL 284
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 45/275 (16%)
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRK-L 173
DVML ++ K + K D A + +V+ L H N+++ +GV+ +++ L
Sbjct: 27 DVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 81
Query: 174 NLVTEYIAGGTLKELLQDPGQPLPWGQ-RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
+VTEY+A G+L + L+ G+ + G + F+ D+ M YL N +HRDL ++N LV
Sbjct: 82 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 141
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
ED V+DFGL + + T K+P W APE +
Sbjct: 142 SEDNVAKVSDFGLTK-----EASSTQDTGKLPVK-------------------WTAPEAL 177
Query: 293 TGQEYDETVDVFSYGIVLCEI--IGRVPAD----PDYLPR-SPDFGLDQTDFRNKFCASC 345
+ DV+S+GI+L EI GRVP D +PR + +D D C
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-------GC 230
Query: 346 PEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
P + C L+ RP F L LE + H
Sbjct: 231 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 265
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EXTARQGAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 178 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 219 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
Query: 387 LPSDL 391
+ +L
Sbjct: 279 VEKEL 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 178 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 219 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
Query: 387 LPSDL 391
+ +L
Sbjct: 279 VEKEL 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 118 LDNWYFEKDGLLFCKEDYNGKYGEACQNC------------------------GQVAVLR 153
LD W E+ + + G++GE + + AV++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 154 SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGM 212
+ H N+++ +GV ++ ++TE++ G L + L++ Q + + A I++ M
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXX 272
YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIK------ 175
Query: 273 XXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---ADPDYLPRS 327
W APE + ++ DV+++G++L EI G P DP S
Sbjct: 176 -------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-----S 217
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKPL 387
+ L + D+R + CPE + C NP RP F + E + S+ +
Sbjct: 218 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
Query: 388 PSDL 391
+L
Sbjct: 278 EKEL 281
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY+ G+L + L+ + G+ L Q V+ +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 178 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 217
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 218 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 182
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 183 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 224 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 283
Query: 387 LPSDL 391
+ +L
Sbjct: 284 VEKEL 288
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 118
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 177
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 178 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 219 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 264
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 183 TAYYRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP R
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPKMR 276
Query: 365 PPF 367
P F
Sbjct: 277 PTF 279
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 48/279 (17%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEAC----QNCGQVAV-------------------LRSL 155
D W ++ + K G++GE N +VAV +++L
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL 65
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFARDIAAGMTY 214
H ++R V+ ++ + ++TEY+A G+L + L+ D G + + ++F+ IA GM Y
Sbjct: 66 QHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 125
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXX 274
+ N IHRDL + N LV E +ADFGLAR+I AK P
Sbjct: 126 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE-GAKFPIK-------- 176
Query: 275 XXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPDFGL 332
W APE + + DV+S+GI+L EI+ G++P P L
Sbjct: 177 -----------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY-PGRTNADVMTAL 224
Query: 333 DQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
Q +R +CP+ I +C ++RP F+ L+
Sbjct: 225 SQ-GYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQ 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +VTEY+ G+L + L+ + G+ L Q V+ +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ-GAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 178 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 217
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C P++RP FE L+ +LE
Sbjct: 218 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 183 TDXXRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP+ R
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPNMR 276
Query: 365 PPF 367
P F
Sbjct: 277 PTF 279
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +V EY++ G+L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 29/243 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 117 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-----------TVKSRWSGSH 165
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVP----A 319
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ G++P
Sbjct: 166 QFE--------QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSM 379
+ D + G D +K ++CP+ R+ C D+RP F + +E L+
Sbjct: 218 NRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
Query: 380 HLS 382
LS
Sbjct: 277 ELS 279
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 118
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 178 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 219 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 264
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 62 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 121
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I++
Sbjct: 122 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 182 TDYYRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 222
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP R
Sbjct: 223 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPKMR 275
Query: 365 PPF 367
P F
Sbjct: 276 PTF 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 113
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 172
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 173 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 214 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 113
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 172
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 173 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 214 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 117
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 118 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 176
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 177 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 218 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 263
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 183 TDYYRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP R
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPKMR 276
Query: 365 PPF 367
P F
Sbjct: 277 PTF 279
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I +
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 180 TDXXRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 220
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP R
Sbjct: 221 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPKMR 273
Query: 365 PPF 367
P F
Sbjct: 274 PTF 276
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++ E++ G L + L++ + Q VN
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-----QEVNAVVL 114
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 173
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 174 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 215 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 275 SISDEVEKEL 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
G+ +++ H N+I GV+ K + + +VTEY+ G+L L+ Q V R
Sbjct: 72 GEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR 131
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPX 265
I+AGM YL M +HRDL ++N L+ + V+DFGL+R++ P A TT K+P
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + +++ DV+SYGIV+ E++ +
Sbjct: 192 R-------------------WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
+ +R CP ++ C + RP F+ + L+ L
Sbjct: 233 NQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 317
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHR+L ++NCLV E+ V VADFGL+R++ G A
Sbjct: 318 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 376
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 377 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 418 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 478 SISDEVEKEL 487
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HRDL ++NC+V D TV + DFG+ R I +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 183 TDXXRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP R
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPKMR 276
Query: 365 PPF 367
P F
Sbjct: 277 PTF 279
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 44/233 (18%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNF 204
+ V+++L H +++ V+ K+ + ++TE++A G+L + L+ D G P + ++F
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 283
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ IA GM ++ N IHRDL + N LV +ADFGLAR V AK P
Sbjct: 284 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFP 332
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 333 IK-------------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 373
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
++P+ + R+ + G +R +CPE I C P++RP FE ++
Sbjct: 374 SNPEVI-RALERG-----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 420
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQNCG-----------------------QVAVLRSL 155
D W ++ L K NG++GE + +++ L
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGMTY 214
H +++ V+ + + +VTEY+ G+L + L+D G+ L V+ A +AAGM Y
Sbjct: 62 KHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXX 274
+ MN IHRDL S N LV +ADFGLAR+I AK P
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ-GAKFPIK-------- 171
Query: 275 XXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPDFGL 332
W APE + DV+S+GI+L E++ GRVP Y + L
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP----YPGMNNREVL 216
Query: 333 DQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+Q + +R CP + C +P++RP FE L+ +LE
Sbjct: 217 EQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 48/256 (18%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL------QDPGQP 195
+ A ++ H +V + +GV + R ++ ++ G L L ++P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN- 133
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
LP V F DIA GM YL S N IHRDL ++NC++ ED TV VADFGL+R I+ G
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
+K+P W+A E + Y DV+++G+ + EI+
Sbjct: 194 RQGCASKLPVK-------------------WLALESLADNLYTVHSDVWAFGVTMWEIMT 234
Query: 316 RVPADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPF 367
R ++P G++ + N C E + + C +P QRP F
Sbjct: 235 R--------GQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSF 286
Query: 368 EVLEVWLEGLSMHLSV 383
L + LE + HLSV
Sbjct: 287 TCLRMELENILGHLSV 302
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 30/233 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
+ V++ L H +++ V+ + + +V EY++ G L + L+ + G+ L Q V+ A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
IA+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + DV+S+GI+L E+ GRVP P +
Sbjct: 181 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY-PGMV 220
Query: 325 PRSPDFGLDQTD--FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
R LDQ + +R CPE + C +P++RP FE L+ +LE
Sbjct: 221 NREV---LDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 29/243 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------------TE 169
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVP----A 319
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ G++P
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSM 379
+ D + G D +K ++CP+ R+ C D+RP F + +E L+
Sbjct: 230 NRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
Query: 380 HLS 382
LS
Sbjct: 289 ELS 291
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ + Q VN
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVL 359
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHR+L ++NCLV E+ V VADFGL+R++ G A
Sbjct: 360 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 418
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 419 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
+ S + L + D+R + CPE + C NP RP F + E +
Sbjct: 460 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
Query: 382 SVDKPLPSDL 391
S+ + +L
Sbjct: 520 SISDEVEKEL 529
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 118 LDNWYFEKDGLLFCKEDYNGKYGEACQNC------------------------GQVAVLR 153
LD W E+ + + G+YGE + + AV++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 154 SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGM 212
+ H N+++ +GV ++ ++ E++ G L + L++ Q + + A I++ M
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXX 272
YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIK------ 175
Query: 273 XXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGL 332
W APE + ++ DV+++G++L EI + + S + L
Sbjct: 176 -------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL 222
Query: 333 DQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D+R + CPE + C NP RP F
Sbjct: 223 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HR+L ++NC+V D TV + DFG+ R I++
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 184 TDYYRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 224
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP+ R
Sbjct: 225 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPNMR 277
Query: 365 PPF 367
P F
Sbjct: 278 PTF 280
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DP 192
E + + +V++ H+V+R +GV+ K + +V E +A G LK L+ +P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 193 GQPLPWGQR-VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+P P Q + A +IA GM YL++ +HR+L ++NC+V D TV + DFG+ R I++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WMAPE + + + D++S+G+VL
Sbjct: 183 TDYYRKGGKGLLPVR-------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L D G LDQ D +CPE + +C NP+ R
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-------NCPERVTDLMRMCWQFNPNMR 276
Query: 365 PPF 367
P F
Sbjct: 277 PTF 279
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++ E++ G L + L++ Q + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 178 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 219 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
Query: 387 LPSDL 391
+ +L
Sbjct: 279 VEKEL 283
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++ E++ G L + L++ Q + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 178 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 219 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
Query: 387 LPSDL 391
+ +L
Sbjct: 279 VEKEL 283
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q + + A
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHR+L ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 384
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + ++ DV+++G++L EI + +
Sbjct: 385 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 425
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
S + L + D+R + CPE + C NP RP F + E + S+
Sbjct: 426 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
Query: 387 LPSDL 391
+ +L
Sbjct: 486 VEKEL 490
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN---- 203
+ AV++ + H N+++ +GV ++ ++ E++ G L + L++ + Q VN
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-----QEVNAVVL 118
Query: 204 --FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
A I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G A
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
K P W APE + ++ DV+++G++L EI +
Sbjct: 178 KFPIK-------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ S + L + D+R + CPE + C NP RP F
Sbjct: 219 PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 264
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 42/240 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-----PG------------ 193
VL+ ++H +VI+ G +D L L+ EY G+L+ L++ PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 194 ------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
+ L G ++FA I+ GM YL M+L+HRDL ++N LV E + + ++DFGL+R
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
+++ ++P WMA E + Y DV+S+G
Sbjct: 199 DVYEEDSXVKRSQGRIPVK-------------------WMAIESLFDHIYTTQSDVWSFG 239
Query: 308 IVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
++L EI+ +P F L +T R + +C E R+ C PD+RP F
Sbjct: 240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-----PG------------ 193
VL+ ++H +VI+ G +D L L+ EY G+L+ L++ PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 194 ------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
+ L G ++FA I+ GM YL M L+HRDL ++N LV E + + ++DFGL+R
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
+++ ++P WMA E + Y DV+S+G
Sbjct: 199 DVYEEDSXVKRSQGRIPVK-------------------WMAIESLFDHIYTTQSDVWSFG 239
Query: 308 IVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
++L EI+ +P F L +T R + +C E R+ C PD+RP F
Sbjct: 240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 213 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 116/284 (40%), Gaps = 57/284 (20%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGE-------------ACQNC-------------GQVAVL 152
D W + L+ ++ G +GE A ++C + +L
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
+ H N++R IGV + + + +V E + GG L+ G L + D AAGM
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXX 272
YL S IHRDL ++NCLV E + ++DFG++R G A + + +VP
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK------ 280
Query: 273 XXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGL 332
W APE + Y DV+S+GI+L E + A P P+
Sbjct: 281 -------------WTAPEALNYGRYSSESDVWSFGILLWETFS-LGASP-----YPNLSN 321
Query: 333 DQT-DFRNKF----CAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
QT +F K C CP+ R+ C P QRP F +
Sbjct: 322 QQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-----PG------------ 193
VL+ ++H +VI+ G +D L L+ EY G+L+ L++ PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 194 ------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
+ L G ++FA I+ GM YL M L+HRDL ++N LV E + + ++DFGL+R
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
+++ ++P WMA E + Y DV+S+G
Sbjct: 199 DVYEEDSYVKRSQGRIPVK-------------------WMAIESLFDHIYTTQSDVWSFG 239
Query: 308 IVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
++L EI+ +P F L +T R + +C E R+ C PD+RP F
Sbjct: 240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 213 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 205 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 294
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 202 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 243 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 291
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 213 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 198 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 287
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 213 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 206 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 295
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 116/284 (40%), Gaps = 57/284 (20%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGE-------------ACQNC-------------GQVAVL 152
D W + L+ ++ G +GE A ++C + +L
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
+ H N++R IGV + + + +V E + GG L+ G L + D AAGM
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXX 272
YL S IHRDL ++NCLV E + ++DFG++R G A + + +VP
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK------ 280
Query: 273 XXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGL 332
W APE + Y DV+S+GI+L E + A P P+
Sbjct: 281 -------------WTAPEALNYGRYSSESDVWSFGILLWETFS-LGASP-----YPNLSN 321
Query: 333 DQT-DFRNKF----CAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
QT +F K C CP+ R+ C P QRP F +
Sbjct: 322 QQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 48/277 (17%)
Query: 121 WYFEKDGLLFCKEDYNGKYGEAC----QNCGQVAV-------------------LRSLHH 157
W ++ + K+ G++GE N +VAV +++L H
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH 66
Query: 158 HNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFARDIAAGMTYLH 216
++R V+ K+ + ++TE++A G+L + L+ D G + + ++F+ IA GM Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 217 SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXX 276
N IHRDL + N LV E +ADFGLAR+I AK P
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE-GAKFPIK---------- 175
Query: 277 XYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPDFGLDQ 334
W APE + + +V+S+GI+L EI+ G++P P L Q
Sbjct: 176 ---------WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY-PGRTNADVMSALSQ 225
Query: 335 TDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
+R +CP+ I +C ++RP F+ L+
Sbjct: 226 -GYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQ 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 115
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 116 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 174
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 175 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 215
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 216 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 109
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 110 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 168
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 169 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 209
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 210 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G++L EI +
Sbjct: 254 RLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R ++C + C P QRP F+ L
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 173
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 174 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 215 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE-GAKFP 173
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 174 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 215 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 116
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 117 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 175
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 176 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 216
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 217 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 173
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 174 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 215 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 173
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 174 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 215 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 123 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 181
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 182 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 222
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 223 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 179
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 180 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 221 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 119
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 120 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 178
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 179 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 219
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 220 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 179
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 180 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 220
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 221 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 123
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 124 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE-GAKFP 182
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 183 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 223
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 224 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHRDL + N LV + + +ADFGLAR+I AK P
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 183
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 184 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 224
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 225 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H NVI GV+ K + ++TE++ G+L L+ Q V R
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 143
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA---KVP 264
IAAGM YL MN +HRDL ++N LV + V+DFGL+R + PT A K+P
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
W APE + +++ DV+SYGIV+ E++ +
Sbjct: 204 IR-------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D+R CP ++ C + + RP F
Sbjct: 245 TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNF 204
+ +++ L H ++R V+ ++ + ++TEY+ G+L + L+ P G L + ++
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 110
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
A IA GM ++ N IHR+L + N LV + + +ADFGLAR+I AK P
Sbjct: 111 AAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 169
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP---- 318
W APE + + DV+S+GI+L EI+ GR+P
Sbjct: 170 IK-------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 210
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+P+ + + +R +CPE ++ LC P+ RP F+ L LE
Sbjct: 211 TNPEVIQNL------ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G +L +VT++ G +L L + ++ AR
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------------TE 169
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVP----A 319
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ G++P
Sbjct: 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
+ D + G D +K ++CP+ R+ C D+RP F + +E L+
Sbjct: 230 NRDQIIEMVGRGSLSPDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 189
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 190 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 235
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 296 ELLARSL 302
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 140 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 188
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 189 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 234
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 235 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 295 ELLARSL 301
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 115 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 163
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 164 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 209
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 210 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 270 ELLARSL 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 166
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 167 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 212
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 273 ELLARSL 279
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 166
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 167 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 212
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 273 ELLARSL 279
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+IR GV+ + R +VTEY+ G+L L+ Q V R
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
+ AGM YL + +HRDL ++N LV + V+DFGL+R++ P A TT K+P
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + + + DV+S+G+V+ E++ Y R
Sbjct: 220 -------------------WTAPEAIAFRTFSSASDVWSFGVVMWEVLA-------YGER 253
Query: 327 SPDFGLDQTD--------FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
P + + D +R CP ++ C + QRP F + L+ L
Sbjct: 254 -PYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+IR GV+ + R +VTEY+ G+L L+ Q V R
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
+ AGM YL + +HRDL ++N LV + V+DFGL+R++ P A TT K+P
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + + + DV+S+G+V+ E++ Y R
Sbjct: 220 -------------------WTAPEAIAFRTFSSASDVWSFGVVMWEVLA-------YGER 253
Query: 327 SPDFGLDQTD--------FRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
P + + D +R CP ++ C + QRP F + L+ L
Sbjct: 254 -PYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 161
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 162 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 207
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 268 ELLARSL 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q R+
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIATILRE 132
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRN----- 182
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
T VG P+WMAPE++ YD D++S GI E+ P + P
Sbjct: 183 -----------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 231
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
F + + + + +P C + P RP
Sbjct: 232 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRP 268
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 184
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 185 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 229
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 230 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 290 ALRVDQIRDNMA 301
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q R+
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIATILRE 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRN----- 162
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
T VG P+WMAPE++ YD D++S GI E+ P + P
Sbjct: 163 -----------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
F + + + + +P C + P RP
Sbjct: 212 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRP 248
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 175
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 176 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 220
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 221 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
Query: 371 EVWLEGLSMHLS 382
+ ++ + ++
Sbjct: 281 ALRVDQIRDQMA 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 35/240 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 195
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 196 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 240
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 241 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 177
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 178 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 223 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 283 ALRVDQIRDNMA 294
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 177
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 178 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 223 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 283 ALRVDQIRDNMA 294
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 208
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 209 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 253
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 254 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
Query: 371 EVWLEGLSMHLS 382
+ ++ + ++
Sbjct: 314 ALRVDQIRDQMA 325
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 180
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 181 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 286 ALRVDQIRDNMA 297
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 182
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 183 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 227
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 228 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 288 ALRVDQIRDNMA 299
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 183
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 184 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 228
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 229 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 289 ALRVDQIRDNMA 300
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 35/240 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 195
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 196 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 240
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 241 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 176
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 177 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 221
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 222 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 282 ALRVDQIRDNMA 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H NV+ GV+ + + + +V E++ G L L+ Q V R
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
IAAGM YL M +HRDL ++N LV + V+DFGL+R+I P A TT K+P
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + +++ DV+SYGIV+ E++ +
Sbjct: 214 -------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ +R CP ++ C +RP FE
Sbjct: 255 QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFE 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 180
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 181 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 286 ALRVDQIRDNMA 297
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ E++ G+L+E LQ + + + + +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 180
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 181 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 286 ALRVDQIRDNMA 297
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPG 181
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 182 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 226
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 227 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 287 ALRVDQIRDNMA 298
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------------TE 181
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 235
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 296 ELLARSL 302
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHRDL ++N LV + V + DFGL +++ P+ K P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEFFKVKEPG 177
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 178 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 223 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 283 ALRVDQIRDNMA 294
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H NVI GV+ K + ++TE++ G+L L+ Q V R
Sbjct: 58 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 117
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA---KVP 264
IAAGM YL MN +HR L ++N LV + V+DFGL+R + PT A K+P
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
W APE + +++ DV+SYGIV+ E++ +
Sbjct: 178 IR-------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D+R CP ++ C + + RP F
Sbjct: 219 TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 261
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA
Sbjct: 133 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------------TE 173
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 174 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 227
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 228 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 288 ELLARSL 294
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G K +L +VT++ G +L L + ++ AR
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------------TE 153
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 207
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 268 ELLARSL 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 26/226 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ + L H +++F GV K+ + +VTEYI+ G L L+ G+ L Q + D
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM +L S IHRDL ++NCLV D V V+DFG+ R + + ++V K P
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVK- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W APE+ +Y DV+++GI++ E+ +G++P D L
Sbjct: 171 ------------------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD---LY 209
Query: 326 RSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + L + + + +I + C P++RP F+ L
Sbjct: 210 TNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V R
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 118
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
I +GM YL M+ +HRDL ++N LV + V+DFG++R++ P A TT K+P
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
W APE + +++ DV+SYGIV+ E++
Sbjct: 179 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V R
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 139
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
I +GM YL M+ +HRDL ++N LV + V+DFG++R++ P A TT K+P
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
W APE + +++ DV+SYGIV+ E++
Sbjct: 200 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 29/252 (11%)
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELL- 189
N E + + A ++ H NVIR +GV + K ++ ++ G L L
Sbjct: 74 NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
Query: 190 ----QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL 245
+ + +P + F DIA GM YL + N +HRDL ++NC++R+D TV VADFGL
Sbjct: 134 YSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGL 193
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
++ I+ G +AK+P W+A E + + Y DV++
Sbjct: 194 SKKIYSGDYYRQGRIAKMPVK-------------------WIAIESLADRVYTSKSDVWA 234
Query: 306 YGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+G+ + EI R + + R K C + I + C +P RP
Sbjct: 235 FGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRP 294
Query: 366 PFEVLEVWLEGL 377
F VL + LE L
Sbjct: 295 TFSVLRLQLEKL 306
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V VLR H N++ F+G +L +VT++ G +L L + ++ AR
Sbjct: 54 EVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
A GM YLH+ ++IHRDL S N + ED TV + DFGLA TV ++
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSGSH 161
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEIIGRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ L
Sbjct: 162 QFE--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQL 207
Query: 325 PRSPDFGLDQTDFR----------NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P S DQ F +K ++CP+ R+ C D+RP F + +
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
Query: 375 EGLSMHL 381
E L+ L
Sbjct: 268 ELLARSL 274
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+I GV+ K + + ++TEY+ G+L L+ Q V R
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 124
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPXX 266
I +GM YL M+ +HRDL ++N LV + V+DFG++R++ P A TT K+P
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
W APE + +++ DV+SYGIV+ E++
Sbjct: 185 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q R+
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIATILRE 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRN----- 162
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
VG P+WMAPE++ YD D++S GI E+ P + P
Sbjct: 163 -----------XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
F + + + + +P C + P RP
Sbjct: 212 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRP 248
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL V ++ G KD KL ++ EY+ GG+ +LL+ PG PL Q R+
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PG-PLDETQIATILRE 127
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRN----- 177
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
VG P+WMAPE++ YD D++S GI E+ P + P
Sbjct: 178 -----------XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 226
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
F + + + + +P C + P RP
Sbjct: 227 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRP 263
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET-SSVGSKFPVR- 186
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 187 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 229 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 271
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L+SL H N++++ GV Y R L L+ EY+ G+L++ LQ + + + + +
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL + IHR+L ++N LV + V + DFGL +++ P+ K P
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL---PQDKEYYKVKEPG 178
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV------PA 319
+W APE +T ++ DV+S+G+VL E+ + PA
Sbjct: 179 ESPI---------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 223
Query: 320 DPDYLPRSPDFG---------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + + G L + + R CP+ I C + N +QRP F L
Sbjct: 224 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
Query: 371 EVWLEGLSMHLS 382
+ ++ + +++
Sbjct: 284 ALRVDQIRDNMA 295
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 119
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVR- 177
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 178 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 220 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 262
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVR- 171
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 172 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 214 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 256
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVR- 186
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 187 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 229 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVR- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 171 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 212
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 213 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 255
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 108
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++V +K P
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVR- 166
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 167 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 208
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 209 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 251
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL + R+ G K KL ++ EY+ GG+ +LL+ PG PL R+
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PG-PLEETYIATILRE 124
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 125 ILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA-----GQLTDTQIKRN----- 174
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
VG P+WMAPE++ YD D++S GI E+ P + D P
Sbjct: 175 -----------XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
F L + +PF C + +P RP
Sbjct: 224 VLF-LIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRP 260
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 132 KEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 191
KE+ ++ N Q L H N++ I V +D LV EYI G TL E ++
Sbjct: 51 KEETLKRFEREVHNSSQ------LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES 104
Query: 192 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G PL +NF I G+ + H M ++HRD+ QN L+ +KT+ + DFG+A+ + +
Sbjct: 105 HG-PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
T V+G + +PE G+ DE D++S GIVL
Sbjct: 164 TSLTQTN--------------------HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203
Query: 312 EII 314
E++
Sbjct: 204 EML 206
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 207 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 248 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 296
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFAR 206
+ AV++ + H N+++ +GV + +VTEY+ G L + L++ + + + A
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMAT 137
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ G AK P
Sbjct: 138 QISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIK 196
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
W APE + + DV+++G++L EI + +
Sbjct: 197 -------------------WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 237
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
S + L + +R + CP + C +P RP F
Sbjct: 238 SQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSF 278
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 209 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 250 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 298
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 212 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 253 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 54/280 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQ---- 194
E + + +V++ + H+V+R +GV+ + + ++ E + G LK L+ P
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 195 ---PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 191 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 231
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 232 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 282
Query: 363 QRPPF--------EVLEVWLEGLSMHLSVDKPLPSDLEAD 394
RP F E +E +S + S + LP E D
Sbjct: 283 MRPSFLEIISSIKEEMEPGFREVSFYYSEENKLPEPEELD 322
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPGQPLPWGQRVNFA 205
++ V+ H N++ +G L LV Y+ G+L + L D PL W R A
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ A G+ +LH + IHRD+ S N L+ E T ++DFGLAR + TVM
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXS--- 193
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
+VG +MAPE + G E D++S+G+VL EII +PA ++
Sbjct: 194 -------------RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 237
Query: 326 RSPDFGL--------------DQTDFR-NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
R P L D D + N ++ E +A C ++RP + +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 371 EVWLEGLS 378
+ L+ ++
Sbjct: 298 QQLLQEMT 305
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 23/178 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ VL V ++ G K KL ++ EY+ GG+ +LL+ P Q ++
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKE 128
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ YLHS IHRD+ + N L+ E V +ADFG+A G T +
Sbjct: 129 ILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA-----GQLTDTQIKRN----- 178
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
T VG P+WMAPE++ YD D++S GI E+ P + D P
Sbjct: 179 -----------TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 225
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPGQPLPWGQRVNFA 205
++ V+ H N++ +G L LV Y+ G+L + L D PL W R A
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ A G+ +LH + IHRD+ S N L+ E T ++DFGLAR + TVM
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXX--- 193
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
+VG +MAPE + G E D++S+G+VL EII +PA ++
Sbjct: 194 -------------RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 237
Query: 326 RSPDFGL--------------DQTDFR-NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
R P L D D + N ++ E +A C ++RP + +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 371 EVWLEGLS 378
+ L+ ++
Sbjct: 298 QQLLQEMT 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ L+H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 218 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 256
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 257 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+IR GV+ + ++TE++ G L L+ Q V R
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT---TVMAKVP 264
IA+GM YL M+ +HRDL ++N LV + V+DFGL+R + + PT ++ K+P
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
W APE + +++ D +SYGIV+ E++ P +
Sbjct: 185 IR-------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS-FGERPYWD 224
Query: 325 PRSPD-FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D + D+R CP ++ C + + RP F
Sbjct: 225 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 268
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 54/280 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDP 192
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 193 G-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 191 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 231
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 232 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 282
Query: 363 QRPPF--------EVLEVWLEGLSMHLSVDKPLPSDLEAD 394
RP F E +E +S + S + LP E D
Sbjct: 283 MRPSFLEIISSIKEEMEPGFREVSFYYSEENKLPEPEELD 322
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 266 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 307 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 355
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 124 EKDGLLFCKEDYNGKYGEACQNCGQVA-VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAG 182
E+D +L + A Q+ + A +L L H +++RF GV + R L +V EY+
Sbjct: 39 EQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 98
Query: 183 GTLKELLQDPG--------------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQ 228
G L L+ G PL GQ + A +AAGM YL ++ +HRDL ++
Sbjct: 99 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 158
Query: 229 NCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMA 288
NCLV + V + DFG++R I+ +P WM
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------------------WMP 199
Query: 289 PEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA----- 343
PE + +++ DV+S+G+VL EI + P + L T+ +
Sbjct: 200 PESILYRKFTTESDVWSFGVVLWEIF--------TYGKQPWYQLSNTEAIDCITQGRELE 251
Query: 344 ---SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
+CP I C P QR + + L+ L+
Sbjct: 252 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 289
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 131
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 132 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 192 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 233 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ L+H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 204 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 242
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 243 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 125/331 (37%), Gaps = 77/331 (23%)
Query: 86 CFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYG----- 140
F + +G+G YA V +A + D W ++ + +E G +G
Sbjct: 7 VFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG 66
Query: 141 --------------------------EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN 174
E + + +V++ + H+V+R +GV+ + +
Sbjct: 67 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 126
Query: 175 LVTEYIAGGTLKELLQDPG---------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDL 225
++ E + G LK L+ P + + A +IA GM YL++ +HRDL
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 226 NSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPY 285
++NC+V ED TV + DFG+ R I++ +P
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------------------- 227
Query: 286 WMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA-- 343
WM+PE + + DV+S+G+VL EI L P GL +F
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVL-RFVMEG 278
Query: 344 -------SCPEPFVRIAFLCCDLNPDQRPPF 367
+CP+ + +C NP RP F
Sbjct: 279 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 309
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 102/244 (41%), Gaps = 31/244 (12%)
Query: 132 KEDYNGKYG-EACQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
K Y+GK E Q+ +V L+ L H N I++ G ++ LV EY G +LL
Sbjct: 47 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-SDLL 105
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
+ +PL + G+ YLHS N+IHRD+ + N L+ E V + DFG A I+
Sbjct: 106 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM---MTGQEYDETVDVFSY 306
AP VG PYWMAPE+ M +YD VDV+S
Sbjct: 166 -----APANXF--------------------VGTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 307 GIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPP 366
GI E+ R P + S + + Q + E F C P RP
Sbjct: 201 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
Query: 367 FEVL 370
EVL
Sbjct: 261 SEVL 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 132 KEDYNGKYG-EACQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
K Y+GK E Q+ +V L+ L H N I++ G ++ LV EY G + +LL
Sbjct: 86 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLL 144
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
+ +PL + G+ YLHS N+IHRD+ + N L+ E V + DFG A I+
Sbjct: 145 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM---MTGQEYDETVDVFSY 306
AP VG PYWMAPE+ M +YD VDV+S
Sbjct: 205 -----APANXF--------------------VGTPYWMAPEVILAMDEGQYDGKVDVWSL 239
Query: 307 GIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPP 366
GI E+ R P + S + + Q + E F C P RP
Sbjct: 240 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
Query: 367 FEVL 370
EVL
Sbjct: 300 SEVL 303
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 124 EKDGLLFCKEDYNGKYGEACQNCGQVA-VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAG 182
E+D +L + A Q+ + A +L L H +++RF GV + R L +V EY+
Sbjct: 68 EQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 127
Query: 183 GTLKELLQDPG--------------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQ 228
G L L+ G PL GQ + A +AAGM YL ++ +HRDL ++
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 229 NCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMA 288
NCLV + V + DFG++R I+ +P WM
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------------------WMP 228
Query: 289 PEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA----- 343
PE + +++ DV+S+G+VL EI + P + L T+ +
Sbjct: 229 PESILYRKFTTESDVWSFGVVLWEIF--------TYGKQPWYQLSNTEAIDCITQGRELE 280
Query: 344 ---SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
+CP I C P QR + + L+ L+
Sbjct: 281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 124 EKDGLLFCKEDYNGKYGEACQNCGQVA-VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAG 182
E+D +L + A Q+ + A +L L H +++RF GV + R L +V EY+
Sbjct: 45 EQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 104
Query: 183 GTLKELLQDPG--------------QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQ 228
G L L+ G PL GQ + A +AAGM YL ++ +HRDL ++
Sbjct: 105 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 164
Query: 229 NCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMA 288
NCLV + V + DFG++R I+ +P WM
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-------------------WMP 205
Query: 289 PEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA----- 343
PE + +++ DV+S+G+VL EI + P + L T+ +
Sbjct: 206 PESILYRKFTTESDVWSFGVVLWEIF--------TYGKQPWYQLSNTEAIDCITQGRELE 257
Query: 344 ---SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
+CP I C P QR + + L+ L+
Sbjct: 258 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 295
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ +L H +++ GV K R + ++TEY+A G L L++ Q + +D
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ M YL S +HRDL ++NCLV + V V+DFGL+R + ++ +K P
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVR- 171
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYLP 325
W PE++ ++ D++++G+++ EI +G++P +
Sbjct: 172 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + AS E I + C D+RP F++L
Sbjct: 214 ETAEHIAQGLRLYRPHLAS--EKVYTIMYSCWHEKADERPTFKIL 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++ H N+IR GV+ + ++TE++ G L L+ Q V R
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT---TVMAKVP 264
IA+GM YL M+ +HRDL ++N LV + V+DFGL+R + + PT ++ K+P
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
W APE + +++ D +SYGIV+ E++ P +
Sbjct: 187 IR-------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS-FGERPYWD 226
Query: 325 PRSPD-FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
+ D + D+R CP ++ C + + RP F
Sbjct: 227 MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 270
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 124
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 125 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 185 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 225
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 226 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 279
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 150
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 151 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 211 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 251
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 252 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 305
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 127
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 128 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 188 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 228
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 229 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 151
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 152 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 212 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 252
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 253 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 130
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 131 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 191 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 232 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 129
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 130 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 190 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 231 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 132
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 133 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 193 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 234 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 131
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 132 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 192 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 233 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 132
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAP 256
+ F +A GM YL S +HRDL ++NC++ E TV VADFGLAR ++
Sbjct: 133 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 193 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 234 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 218 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 256
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 257 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 203 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 241
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 242 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 203 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 241
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 242 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 220 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 258
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 259 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 135 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 195 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 233
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 234 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 287
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 218 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 256
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 257 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 204 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 242
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 243 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQ---- 194
E + + +V++ + H+V+R +GV+ + + ++ E + G LK L+ P
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 195 ---PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 181 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 221
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 222 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 272
Query: 363 QRPPF 367
RP F
Sbjct: 273 MRPSF 277
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 221 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 259
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 260 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 210 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 248
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 249 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ Y + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 244 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 282
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 283 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDP 192
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 115
Query: 193 G-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I +
Sbjct: 116 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 176 TDXXRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 216
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + + +C NP
Sbjct: 217 EIA--------TLAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPK 267
Query: 363 QRPPF 367
RP F
Sbjct: 268 MRPSF 272
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 230 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 268
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 269 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 322
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 39/248 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPGQPLPWGQRVNFA 205
++ V+ H N++ +G L LV Y+ G+L + L D PL W R A
Sbjct: 74 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 133
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ A G+ +LH + IHRD+ S N L+ E T ++DFGLAR + VM
Sbjct: 134 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVMXX--- 187
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
+VG +MAPE + G E D++S+G+VL EII +PA ++
Sbjct: 188 -------------RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 231
Query: 326 RSPDFGL--------------DQTDFR-NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
R P L D D + N ++ E +A C ++RP + +
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 371 EVWLEGLS 378
+ L+ ++
Sbjct: 292 QQLLQEMT 299
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG------- 193
E + + +V++ + H+V+R +GV+ + + ++ E + G LK L+
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 194 --QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 184 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 224
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 225 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 275
Query: 363 QRPPF 367
RP F
Sbjct: 276 MRPSF 280
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG------- 193
E + + +V++ + H+V+R +GV+ + + ++ E + G LK L+
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 194 --QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 185 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 225
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 226 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 276
Query: 363 QRPPF 367
RP F
Sbjct: 277 MRPSF 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 78/308 (25%)
Query: 110 LCSACDVML-DNWYFEKDGLLFCKEDYNGKYG---------------------------- 140
+ SA DV + D W ++ + +E G +G
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 141 ---EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELL 189
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 190 QDPG-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI 248
+P P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGI 308
I++ +P WM+PE + + DV+S+G+
Sbjct: 181 IYETDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGV 221
Query: 309 VLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDL 359
VL EI L P GL +F +CP+ + +C
Sbjct: 222 VLWEIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQY 272
Query: 360 NPDQRPPF 367
NP RP F
Sbjct: 273 NPKMRPSF 280
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDP 192
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 193 G-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 182 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 222
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 223 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 273
Query: 363 QRPPF 367
RP F
Sbjct: 274 MRPSF 278
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDP 192
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 193 G-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 178 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 218
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + +C NP
Sbjct: 219 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPK 269
Query: 363 QRPPF 367
RP F
Sbjct: 270 MRPSF 274
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 191
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 192 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 252 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 292
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 293 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------PGQPLPWGQR 201
H N+I +G +D L ++ Y + G L+E L+ P + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
++P WMAPE + + Y DV+S+G+++ EI +
Sbjct: 220 RLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+P F L + R A+C + C P QRP F+ L
Sbjct: 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 133
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 134 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 193
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 194 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 235 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 130
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 131 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 190
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 191 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 232 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 34/246 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H N++++ G+ +D + L+ E++ G+LKE L + Q++ +A
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V + DFGL + I T +
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
+W APE + ++ DV+S+G+ L E++ +D +
Sbjct: 181 V------------------FWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA 222
Query: 326 R-----SPDFG-LDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
P G + T N +CP+ ++ C + P R F+ L
Sbjct: 223 LFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 372 VWLEGL 377
E L
Sbjct: 283 EGFEAL 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 132
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 133 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 193 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 234 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 137
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 138 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 197
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 198 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 238
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 239 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 292
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H N++++ G+ +D + L+ E++ G+LKE L + Q++ +A
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V + DFGL + I T +
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR--- 189
Query: 266 XXXXXXXXXXXXYTVVGNP-YWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
+P +W APE + ++ DV+S+G+ L E++ +D +
Sbjct: 190 ----------------DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM 233
Query: 325 PR-----SPDFG-LDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEVL 370
P G + T N +CP+ ++ C + P R F+ L
Sbjct: 234 ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293
Query: 371 EVWLEGL 377
E L
Sbjct: 294 IEGFEAL 300
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 132
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH--QGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ +
Sbjct: 133 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 193 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 234 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--------ELLQDP 192
E + + +V++ + H+V+R +GV+ + + ++ E + G LK E+ +P
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 193 G-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 185 TDXXRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 225
Query: 312 EI--IGRVP----ADPDYLPRSPDFG-LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
EI + P ++ L + G LD+ D +CP+ + +C NP R
Sbjct: 226 EIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMR 278
Query: 365 PPF 367
P F
Sbjct: 279 PSF 281
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 30/185 (16%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII-HQGPRAPTTVMAKV 263
R+ + +LHS +IHRD+ S N L+ D +V + DFG A+I Q R+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-------- 174
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
T+VG PYWMAPE++T + Y VD++S GI+ E+I +P Y
Sbjct: 175 ---------------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI---EGEPPY 216
Query: 324 LPRSP 328
L +P
Sbjct: 217 LNENP 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG------- 193
E + + +V++ + H+V+R +GV+ + + ++ E + G LK L+
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 194 --QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
P + + A +IA GM YL++ +HRDL ++NC V ED TV + DFG+ R I++
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+P WM+PE + + DV+S+G+VL
Sbjct: 178 TDYYRKGGKGLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLW 218
Query: 312 EIIGRVPADPDYLPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPD 362
EI L P GL +F +CP+ + + +C NP
Sbjct: 219 EIAT--------LAEQPYQGLSNEQVL-RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPK 269
Query: 363 QRPPF 367
RP F
Sbjct: 270 MRPSF 274
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVT-EYIAGGTLKELLQDPGQPLPW 198
GE Q + +++ H NV+ +G+ + LV Y+ G L+ +++
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 133
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR--IIHQGPRAP 256
+ F +A GM +L S +HRDL ++NC++ E TV VADFGLAR + +
Sbjct: 134 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH 193
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
AK+P WMA E + Q++ DV+S+G++L E++ R
Sbjct: 194 NKTGAKLPVK-------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 317 -VPADPDYLPRSPDFGLDQTDFRNKFCAS-CPEPFVRIAFLCCDLNPDQRPPFEVL 370
P PD + D + R CP+P + C + RP F L
Sbjct: 235 GAPPYPDV--NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQP--LPWGQR 201
+ ++ +H N++R IGV + ++ E +AGG LK L++ P QP L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
++ ARDIA G YL + IHRD+ ++NCL+ + + DFG+A+ I++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A +P WM PE + D +S+G++L EI
Sbjct: 204 GCAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-- 242
Query: 319 ADPDYLPRSPDFGLDQTDF-----RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
Y+P + +F R +CP P RI C P+ RP F ++
Sbjct: 243 ---GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 58/251 (23%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---------------- 191
+ A++ + N+++ +GV + + L+ EY+A G L E L+
Sbjct: 100 EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 159
Query: 192 ------PGQP-LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFG 244
PG P L +++ AR +AAGM YL +HRDL ++NCLV E+ V +ADFG
Sbjct: 160 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 245 LARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVF 304
L+R I+ +P WM PE + Y DV+
Sbjct: 220 LSRNIYSADYYKADGNDAIPIR-------------------WMPPESIFYNRYTTESDVW 260
Query: 305 SYGIVLCEIIGRVPADPDYLPRSPDFGLDQTD----FRNKFCASCPE----PFVRIAFLC 356
+YG+VL EI P +G+ + R+ +CPE + LC
Sbjct: 261 AYGVVLWEIFS--------YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC 312
Query: 357 CDLNPDQRPPF 367
P RP F
Sbjct: 313 WSKLPADRPSF 323
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---------QDPGQPLPWGQRVNFAR 206
H N++ +G + ++TEY G L L ++ G+PL ++F+
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+A GM +L S N IHRD+ ++N L+ + DFGLAR I A++P
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYL 324
WMAPE + Y DV+SYGI+L EI +G P P L
Sbjct: 220 -------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-PGIL 259
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
S + L + ++ A P+ I C L P RP F+
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 303
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 30/173 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H ++I++ G ++ L LV EY+ G+L++ L P + Q + FA
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFA 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ I GM YLHS + IHR+L ++N L+ D+ V + DFGLA+ + +G
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG------------- 170
Query: 266 XXXXXXXXXXXXYTVVGNP----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y V + +W APE + ++ DV+S+G+ L E++
Sbjct: 171 ---------HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---------QDPGQPLPWGQRVNFAR 206
H N++ +G + ++TEY G L L ++ G+PL ++F+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+A GM +L S N IHRD+ ++N L+ + DFGLAR I A++P
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPADPDYL 324
WMAPE + Y DV+SYGI+L EI +G P P L
Sbjct: 228 -------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-PGIL 267
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
S + L + ++ A P+ I C L P RP F+
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 311
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 111/273 (40%), Gaps = 69/273 (25%)
Query: 135 YNGKYGEACQNCGQVAV---------------------LRSLHHHNVIRFIGVLYKDRKL 173
Y+G+Y + QN Q A+ +R L+H NV+ IG++ L
Sbjct: 38 YHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL 97
Query: 174 -NLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
+++ Y+ G L + ++ P + ++F +A GM YL +HRDL ++NC++
Sbjct: 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157
Query: 233 REDKTVVVADFGLARII----------HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVG 282
E TV VADFGLAR I H+ R P
Sbjct: 158 DESFTVKVADFGLARDILDREYYSVQQHRHARLPVK------------------------ 193
Query: 283 NPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDF----- 337
W A E + + DV+S+G++L E++ R P Y P D T F
Sbjct: 194 ---WTALESLQTYRFTTKSDVWSFGVLLWELLTR--GAPPYRHIDP---FDLTHFLAQGR 245
Query: 338 RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
R CP+ ++ C + +P RP F VL
Sbjct: 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 30/185 (16%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII-HQGPRAPTTVMAKV 263
R+ + +LHS +IHR++ S N L+ D +V + DFG A+I Q R+
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
T+VG PYWMAPE++T + Y VD++S GI+ E+I +P Y
Sbjct: 176 ---------------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI---EGEPPY 217
Query: 324 LPRSP 328
L +P
Sbjct: 218 LNENP 222
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 30/174 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L + + ++
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 121
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V +ADFGLA+++
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---------------- 165
Query: 266 XXXXXXXXXXXXYTVVGNP-----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y VV P +W APE ++ + DV+S+G+VL E+
Sbjct: 166 -------PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 30/174 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L + + ++
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V +ADFGLA+++
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---------------- 177
Query: 266 XXXXXXXXXXXXYTVVGNP-----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y VV P +W APE ++ + DV+S+G+VL E+
Sbjct: 178 -------PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 30/174 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L + + ++
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V +ADFGLA+++
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---------------- 164
Query: 266 XXXXXXXXXXXXYTVVGNP-----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y VV P +W APE ++ + DV+S+G+VL E+
Sbjct: 165 -------PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII-HQGPRAPTTVMAKV 263
R+ + +LHS +IHRD+ S N L+ D +V + DFG A+I Q R+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-------- 174
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
+VG PYWMAPE++T + Y VD++S GI+ E+I +P Y
Sbjct: 175 ---------------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI---EGEPPY 216
Query: 324 LPRSP 328
L +P
Sbjct: 217 LNENP 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII-HQGPRAPTTVMAKV 263
R+ + +LHS +IHRD+ S N L+ D +V + DFG A+I Q R+
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
+VG PYWMAPE++T + Y VD++S GI+ E+I +P Y
Sbjct: 176 ---------------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI---EGEPPY 217
Query: 324 LPRSP 328
L +P
Sbjct: 218 LNENP 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 30/173 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H ++I++ G ++ L LV EY+ G+L++ L P + Q + FA
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFA 123
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ I GM YLH+ + IHR+L ++N L+ D+ V + DFGLA+ + +G
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG------------- 170
Query: 266 XXXXXXXXXXXXYTVVGNP----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y V + +W APE + ++ DV+S+G+ L E++
Sbjct: 171 ---------HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVC 122
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII-HQGPRAPTTVMAKV 263
R+ + +LHS +IHRD+ S N L+ D +V + DFG A+I Q R+
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-------- 174
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
+VG PYWMAPE++T + Y VD++S GI+ E+I +P Y
Sbjct: 175 ---------------EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI---EGEPPY 216
Query: 324 LPRSP 328
L +P
Sbjct: 217 LNENP 221
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 33/185 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------------DPGQP 195
+ +L +L H ++++F GV + L +V EY+ G L + L+ +P
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L Q ++ A+ IAAGM YL S + +HRDL ++NCLV E+ V + DFG++R ++
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII- 314
+P WM PE + +++ DV+S G+VL EI
Sbjct: 185 RVGGHTMLPIR-------------------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
Query: 315 -GRVP 318
G+ P
Sbjct: 226 YGKQP 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L + + ++
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 117
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
I GM YL S +HRDL ++N LV + V +ADFGLA+++ P + + P
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDXXVVREPG 174
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
+W APE ++ + DV+S+G+VL E+
Sbjct: 175 QSPI---------------FWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW---GQRVNFARDI 208
L ++H N+++ G + LV EY GG+L +L +PLP+ +++
Sbjct: 56 LSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQC 112
Query: 209 AAGMTYLHSMN---LIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVP 264
+ G+ YLHSM LIHRDL N L+ TV+ + DFG A I T M
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNK 165
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG-RVPADPDY 323
G+ WMAPE+ G Y E DVFS+GI+L E+I R P D
Sbjct: 166 -----------------GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 208
Query: 324 LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLEVWLEGLSMHLS 382
P R + P+P + C +P QRP E++++ +
Sbjct: 209 GPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 268
Query: 383 VDKPL 387
D+PL
Sbjct: 269 ADEPL 273
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPW---GQRVNFARDI 208
L ++H N+++ G + LV EY GG+L +L +PLP+ +++
Sbjct: 55 LSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQC 111
Query: 209 AAGMTYLHSMN---LIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVP 264
+ G+ YLHSM LIHRDL N L+ TV+ + DFG A I T M
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNK 164
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG-RVPADPDY 323
G+ WMAPE+ G Y E DVFS+GI+L E+I R P D
Sbjct: 165 -----------------GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207
Query: 324 LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLEVWLEGLSMHLS 382
P R + P+P + C +P QRP E++++ +
Sbjct: 208 GPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267
Query: 383 VDKPL 387
D+PL
Sbjct: 268 ADEPL 272
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 30/173 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H ++I++ G L LV EY+ G+L++ L P + Q + FA
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFA 140
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ I GM YLH+ + IHRDL ++N L+ D+ V + DFGLA+ + +G
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEX---------- 190
Query: 266 XXXXXXXXXXXXYTVVGNP----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y V + +W APE + ++ DV+S+G+ L E++
Sbjct: 191 ------------YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 96/237 (40%), Gaps = 44/237 (18%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---------------QDP-------G 193
H N++ +G + ++TEY G L L QDP G
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+PL ++F+ +A GM +L S N IHRD+ ++N L+ + DFGLAR I
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
A++P WMAPE + Y DV+SYGI+L EI
Sbjct: 213 NYIVKGNARLPVK-------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 253
Query: 314 --IGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+G P P L S + L + ++ A P+ I C L P RP F+
Sbjct: 254 FSLGLNPY-PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 309
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L L+ EY +GG + + L G+ R F R
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQ 119
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + TV K+
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN--------EFTVGGKLD--- 168
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 169 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 217
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 218 ELRERVL-RGKYRIPFYMSTDCENLLKRFLV--LNPIKRGTLE 257
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 45/250 (18%)
Query: 141 EACQNC-----GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------ 189
E CQ ++ + HH N++ + +L LV + ++GG++ +++
Sbjct: 51 EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK 110
Query: 190 -QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI 248
+ L R++ G+ YLH IHRD+ + N L+ ED +V +ADFG++
Sbjct: 111 GEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYG 307
+ G + K T VG P WMAPE+M + YD D++S+G
Sbjct: 171 LATGGDITRNKVRK----------------TFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 308 IVLCEIIGRVPADPDYLPR------------SPDFGLDQTDFRNKFCASCPEPFVRIAFL 355
I E+ Y P S + G+ + K+ S F ++ L
Sbjct: 215 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS----FRKMISL 270
Query: 356 CCDLNPDQRP 365
C +P++RP
Sbjct: 271 CLQKDPEKRP 280
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G R F R
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-RQ 114
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 163
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 164 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 212
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 213 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 252
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 45/250 (18%)
Query: 141 EACQNC-----GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------ 189
E CQ ++ + HH N++ + +L LV + ++GG++ +++
Sbjct: 46 EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK 105
Query: 190 -QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI 248
+ L R++ G+ YLH IHRD+ + N L+ ED +V +ADFG++
Sbjct: 106 GEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 165
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYG 307
+ G + K T VG P WMAPE+M + YD D++S+G
Sbjct: 166 LATGGDITRNKVRK----------------TFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 308 IVLCEIIGRVPADPDYLPR------------SPDFGLDQTDFRNKFCASCPEPFVRIAFL 355
I E+ Y P S + G+ + K+ S F ++ L
Sbjct: 210 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS----FRKMISL 265
Query: 356 CCDLNPDQRP 365
C +P++RP
Sbjct: 266 CLQKDPEKRP 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++ D
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 208 IAAGMTYLHSMN--LIHRDLNSQNCLVR---EDKTV--VVADFGLARIIHQGPRAPTTVM 260
IA G+ Y+ + N ++HRDL S N ++ E+ V VADFGL++
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------------- 177
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRV 317
++GN WMAPE + +E Y E D +S+ ++L I+ G
Sbjct: 178 -----------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 318 PADPDYLPRSPDF--GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
P D +Y F + + R CP + LC +P +RP F +
Sbjct: 227 PFD-EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD----------- 171
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
T G+P + APE+ G++YD VDV+S G++L ++ G +P D
Sbjct: 172 -----------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 48/233 (20%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++++ +V+++ G +K+ L +V EY G++ ++++ + L + +
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
G+ YLH M IHRD+ + N L+ + +ADFG+A + T MAK
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL-------TDXMAK----- 181
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-------------- 313
V+G P+WMAPE++ Y+ D++S GI E+
Sbjct: 182 ---------RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR 232
Query: 314 -IGRVPADPDYLPRSPDFGLDQ-TDFRNKFCASCPE-----------PFVRIA 353
I +P +P R P+ D TDF + PE PFVR A
Sbjct: 233 AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 107/260 (41%), Gaps = 43/260 (16%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ---PL 196
G Q +V ++ H N++R G + LV Y+A G++ L++ + PL
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 136
Query: 197 PWGQRVNFARDIAAGMTYLHSM---NLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
W +R A A G+ YLH +IHRD+ + N L+ E+ VV DFGLA+++
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---- 192
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
V G +APE ++ + E DVF YG++L E+
Sbjct: 193 ----------------DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 236
Query: 314 I--------GRVPADPD---------YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLC 356
I R+ D D L L D + + E +++A LC
Sbjct: 237 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 296
Query: 357 CDLNPDQRPPFEVLEVWLEG 376
+P +RP + LEG
Sbjct: 297 TQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 107/260 (41%), Gaps = 43/260 (16%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ---PL 196
G Q +V ++ H N++R G + LV Y+A G++ L++ + PL
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 197 PWGQRVNFARDIAAGMTYLHSM---NLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
W +R A A G+ YLH +IHRD+ + N L+ E+ VV DFGLA+++
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--- 185
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
V G +APE ++ + E DVF YG++L E+
Sbjct: 186 -----------------YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228
Query: 314 I--------GRVPADPD---------YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLC 356
I R+ D D L L D + + E +++A LC
Sbjct: 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLC 288
Query: 357 CDLNPDQRPPFEVLEVWLEG 376
+P +RP + LEG
Sbjct: 289 TQSSPMERPKMSEVVRMLEG 308
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 114/280 (40%), Gaps = 74/280 (26%)
Query: 136 NGKYGEACQ----NCGQVAVLRSL---------------------HHHNVIRFIGVLYK- 169
NG YG+ + GQ+A ++ + HH N+ + G K
Sbjct: 34 NGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93
Query: 170 -----DRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
D +L LV E+ G++ +L+++ G L R+I G+++LH +IHR
Sbjct: 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR 153
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
D+ QN L+ E+ V + DFG++ + + TV + T +G
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVSAQLDR------TVGRR---------------NTFIGT 192
Query: 284 PYWMAPEMMTGQE-----YDETVDVFSYGIVLCEIIGRVPADPD--------YLPRSPDF 330
PYWMAPE++ E YD D++S GI E+ P D +PR+P
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP 252
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
L + KF + F+ C N QRP E L
Sbjct: 253 RLKSKKWSKKF-----QSFIES---CLVKNHSQRPATEQL 284
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
G+P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--DPGQPLPWGQRVNFA 205
++ V H N++ +G L LV Y G+L + L D PL W R A
Sbjct: 71 EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIA 130
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ A G+ +LH + IHRD+ S N L+ E T ++DFGLAR + +
Sbjct: 131 QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR----- 185
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
+VG + APE + G E D++S+G+VL EII +PA ++
Sbjct: 186 --------------IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 228
Query: 326 RSPDFGL--------------DQTDFR-NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
R P L D D + N ++ E +A C ++RP + +
Sbjct: 229 REPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
Query: 371 EVWLE 375
+ L+
Sbjct: 289 QQLLQ 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
G P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYMSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 37/230 (16%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQ 200
H N++ +G + ++TEY G L L+ +P + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
++F+ +A GM +L S N IHRD+ ++N L+ + DFGLAR I
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVP 318
A++P WMAPE + Y DV+SYGI+L EI +G P
Sbjct: 228 ARLPVK-------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 268
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P L S + L + ++ A P+ I C L P RP F+
Sbjct: 269 Y-PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 317
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 30/173 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H +++++ G ++ + LV EY+ G+L++ L P + Q + FA
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFA 117
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ I GM YLH+ + IHR L ++N L+ D+ V + DFGLA+ + +G
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG------------- 164
Query: 266 XXXXXXXXXXXXYTVVGNP----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y V + +W APE + ++ DV+S+G+ L E++
Sbjct: 165 ---------HEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 30/173 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR+L+H +++++ G ++ + LV EY+ G+L++ L P + Q + FA
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFA 118
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ I GM YLH+ + IHR L ++N L+ D+ V + DFGLA+ + +G
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG------------- 165
Query: 266 XXXXXXXXXXXXYTVVGNP----YWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y V + +W APE + ++ DV+S+G+ L E++
Sbjct: 166 ---------HEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LVTE++ G L + L+ + D
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 112
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 171 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 208
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 209 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +++ L+H N+++ V+ ++ L L+ EY +GG + + L G+ R F R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-RQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + TV K+
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN--------EFTVGGKLD--- 171
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
G P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 172 -----------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 221 ELRERVL-RGKYRIPFYMSTDCENLLKRFLV--LNPIKRGTLE 260
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 50/240 (20%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---------QP--- 195
+ +L +L H ++++F GV L +V EY+ G L + L+ G QP
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 196 ---LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
L Q ++ A IA+GM YL S + +HRDL ++NCLV + V + DFG++R ++
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
+P WM PE + +++ DV+S+G++L E
Sbjct: 187 DYYRVGGHTMLPIR-------------------WMPPESIMYRKFTTESDVWSFGVILWE 227
Query: 313 IIGRVPADPDYLPRSPDFGLDQTDFRNKFCAS--------CPEPFVRIAFLCCDLNPDQR 364
I + P F L T+ CP+ + C P QR
Sbjct: 228 IFT--------YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQR 279
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + + L+H N+++ V+ ++ L LV EY +GG + + L G+ R F R
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-RQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL ++N L+ D + +ADFG + G +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD----------- 170
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
G P + APE+ G++YD VDV+S G++L ++ G +P D L
Sbjct: 171 -----------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
+ L + +R F S + FL LNP +R E
Sbjct: 220 ELRERVL-RGKYRIPFYXSTDCENLLKKFLI--LNPSKRGTLE 259
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPG-----QPLPWGQRV 202
H N++ +G + ++TEY G L L+ DP L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRD+ ++N L+ + DFGLAR I A+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI+L EI +G P
Sbjct: 228 LPVK-------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY- 267
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P L S + L + ++ A P+ I C L P RP F+
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 39/235 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++ D
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 208 IAAGMTYLHSMN--LIHRDLNSQNCLVR---EDKTV--VVADFGLARIIHQGPRAPTTVM 260
IA G+ Y+ + N ++HRDL S N ++ E+ V VADFG ++
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------------- 177
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRV 317
++GN WMAPE + +E Y E D +S+ ++L I+ G
Sbjct: 178 -----------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 318 PADPDYLPRSPDF--GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
P D +Y F + + R CP + LC +P +RP F +
Sbjct: 227 PFD-EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LV E++ G L + L+ + D
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL ++IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 169
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 170 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 207
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 208 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 39/235 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++ +L+H N+++ G+++ ++ V E++ G L L D P+ W ++ D
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 208 IAAGMTYLHSMN--LIHRDLNSQNCLVR---EDKTV--VVADFGLARIIHQGPRAPTTVM 260
IA G+ Y+ + N ++HRDL S N ++ E+ V VADF L++
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------------- 177
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRV 317
++GN WMAPE + +E Y E D +S+ ++L I+ G
Sbjct: 178 -----------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 318 PADPDYLPRSPDF--GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
P D +Y F + + R CP + LC +P +RP F +
Sbjct: 227 PFD-EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ YLH +IHRDL + N L D + +ADFG++ + T+ +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS------AKNTRTIQRR----- 192
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMM-----TGQEYDETVDVFSYGIVLCEI 313
+ +G PYWMAPE++ + YD DV+S GI L E+
Sbjct: 193 ----------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ YLH +IHRDL + N L D + +ADFG++ T + +
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTXIQRR----- 166
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMM-----TGQEYDETVDVFSYGIVLCEI 313
+ +G PYWMAPE++ + YD DV+S GI L E+
Sbjct: 167 ----------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++L+ LHH N++ I V++ +R L LV E++ LK++L + L Q +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ + H ++HRDL QN L+ D + +ADFGLAR R+ T + +
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL---- 183
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP-----ADP 321
++ AP+++ G ++Y +VD++S G + E+I P D
Sbjct: 184 -----------------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226
Query: 322 DYLPR 326
D LP+
Sbjct: 227 DQLPK 231
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 28/185 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++L+ LHH N++ I V++ +R L LV E++ LK++L + L Q +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ + H ++HRDL QN L+ D + +ADFGLAR R+ T + +
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL---- 183
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP-----ADP 321
++ AP+++ G ++Y +VD++S G + E+I P D
Sbjct: 184 -----------------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226
Query: 322 DYLPR 326
D LP+
Sbjct: 227 DQLPK 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L + H +++ +G Y D KL ++ E+ GG + ++ + + L Q R
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ + +LHS +IHRDL + N L+ + + +ADFG++
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS--------------------- 164
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEM-----MTGQEYDETVDVFSYGIVLCEIIGRVPADPD 322
+ +G PYWMAPE+ M YD D++S GI L E+ P +
Sbjct: 165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224
Query: 323 YLPRSPDFGLDQTD-----FRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
P + ++D +K+ + F++IA D NP+ RP
Sbjct: 225 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRD-FLKIAL---DKNPETRP 268
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 146 CGQVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-------DPG---- 193
G++ VL L HH N+I +G L L EY G L + L+ DP
Sbjct: 73 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 194 ----QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
L Q ++FA D+A GM YL IHRDL ++N LV E+ +ADFGL+R
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-- 190
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
Q T M ++P WMA E + Y DV+SYG++
Sbjct: 191 GQEVYVKKT-MGRLPVR-------------------WMAIESLNYSVYTTNSDVWSYGVL 230
Query: 310 LCEII 314
L EI+
Sbjct: 231 LWEIV 235
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 146 CGQVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-------DPG---- 193
G++ VL L HH N+I +G L L EY G L + L+ DP
Sbjct: 63 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 122
Query: 194 ----QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
L Q ++FA D+A GM YL IHRDL ++N LV E+ +ADFGL+R
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-- 180
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
Q T M ++P WMA E + Y DV+SYG++
Sbjct: 181 GQEVYVKKT-MGRLPVR-------------------WMAIESLNYSVYTTNSDVWSYGVL 220
Query: 310 LCEII 314
L EI+
Sbjct: 221 LWEIV 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L + H +++ +G Y D KL ++ E+ GG + ++ + + L Q R
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ + +LHS +IHRDL + N L+ + + +ADFG++
Sbjct: 118 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS--------------------- 156
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEM-----MTGQEYDETVDVFSYGIVLCEIIGRVPADPD 322
+ +G PYWMAPE+ M YD D++S GI L E+ P +
Sbjct: 157 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 216
Query: 323 YLPRSPDFGLDQTD-----FRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
P + ++D +K+ + F++IA D NP+ RP
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRD-FLKIAL---DKNPETRP 260
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R HH NV+ +L +V E++ GG L +++ + Q
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLS 149
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ ++YLH+ +IHRD+ S + L+ D + ++DFG V +VP
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC----------AQVSKEVPKRK 199
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
+VG PYWMAPE+++ Y VD++S GI++ E+I +P Y
Sbjct: 200 -----------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID---GEPPYFNEP 245
Query: 328 P 328
P
Sbjct: 246 P 246
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L ++ E++ GG L +++ L Q
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEA 149
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTVMAKVPXX 266
+ + YLH+ +IHRD+ S + L+ D V ++DFG A+I P+
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX--------- 200
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
+VG PYWMAPE+++ Y VD++S GI++ E+ V +P Y
Sbjct: 201 -------------LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM---VDGEPPYFSD 244
Query: 327 SP 328
SP
Sbjct: 245 SP 246
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LV E++ G L + L+ + D
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 169
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 170 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 207
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 208 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------DPGQPLPWGQR-----V 202
H N++ +G + ++TEY G L L+ DP + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRD+ ++N L+ + DFGLAR I A+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI+L EI +G P
Sbjct: 228 LPVK-------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY- 267
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P L S + L + ++ A P+ I C L P RP F+
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LV E++ G L + L+ + D
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 109
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 167
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 168 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 205
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 206 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 110
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 111 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 164
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 165 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ + + L+H NV++F G + L EY +GG L + ++ D G P P QR F
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFH 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK---- 165
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 166 -------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
NG+ G +VA+LR L H NV+R + V R K+ LV E++
Sbjct: 41 NGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY 100
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P LP + R G+ +LH+ ++HRDL +N LV TV +ADFGLAR
Sbjct: 101 LDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I + MA P VV ++ APE++ Y VD++S G
Sbjct: 161 IY-------SYQMALAP---------------VVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 308 IVLCEIIGRVP 318
+ E+ R P
Sbjct: 199 CIFAEMFRRKP 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LV E++ G L + L+ + D
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 114
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 172
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 173 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 210
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 211 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ YLH +IHRDL + N L D + +ADFG++ A T +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQ----- 190
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMM-----TGQEYDETVDVFSYGIVLCEI 313
+ +G PYWMAPE++ + YD DV+S GI L E+
Sbjct: 191 --------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ V+ L H +++ GV + + LV E++ G L + L+ + D
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 131
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK- 189
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W +PE+ + Y DV+S+G+++ E+ G++P Y
Sbjct: 190 ------------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YEN 227
Query: 326 RSPDFGLD--QTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
RS ++ T FR +I C P+ RP F L
Sbjct: 228 RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 274
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
NG+ G +VA+LR L H NV+R + V R K+ LV E++
Sbjct: 41 NGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY 100
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P LP + R G+ +LH+ ++HRDL +N LV TV +ADFGLAR
Sbjct: 101 LDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I + MA P VV ++ APE++ Y VD++S G
Sbjct: 161 IY-------SYQMALFP---------------VVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 308 IVLCEIIGRVP 318
+ E+ R P
Sbjct: 199 CIFAEMFRRKP 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+VAVL ++ H N++++ ++ L +V +Y GG L K + G Q +++
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I + ++H ++HRD+ SQN + +D TV + DFG+AR+++ T +A+
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELAR---- 183
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+G PY+++PE+ + Y+ D+++ G VL E+
Sbjct: 184 ------------ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 146 CGQVAVLRSLHHHNVIRF-------------IGVLYKDRKLNLVTEYIAGGTLKELLQDP 192
+V +L SL+H V+R+ + + K L + EY GTL +L+
Sbjct: 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE 109
Query: 193 GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
+ R I ++Y+HS +IHRDL N + E + V + DFGLA+ +H+
Sbjct: 110 NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLC 311
+P + +G ++A E++ G Y+E +D++S GI+
Sbjct: 170 LDILKLDSQNLPGSSDNLT-------SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 312 EII-------GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
E+I RV S +F D D + K +I L D +P++R
Sbjct: 223 EMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEK-------KIIRLLIDHDPNKR 275
Query: 365 P 365
P
Sbjct: 276 P 276
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 59/247 (23%)
Query: 150 AVLRS-LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------QDPGQ-------- 194
A+LR+ L H NV+ +GV+ KD+ L+++ Y + G L E L D G
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 195 -PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L V+ IAAGM YL S +++H+DL ++N LV + V ++D GL R ++
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA- 181
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPY----WMAPEMMTGQEYDETVDVFSYGIV 309
Y ++GN WMAPE + ++ D++SYG+V
Sbjct: 182 ----------------------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 219
Query: 310 LCEIIGRVPADPDYLPRSPDFGLDQTD----FRNKFCASCPE--PFVRIAFL--CCDLNP 361
L E+ P G D RN+ CP+ P A + C + P
Sbjct: 220 LWEVFS--------YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFP 271
Query: 362 DQRPPFE 368
+RP F+
Sbjct: 272 SRRPRFK 278
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 59/247 (23%)
Query: 150 AVLRS-LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL------QDPGQ-------- 194
A+LR+ L H NV+ +GV+ KD+ L+++ Y + G L E L D G
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 195 -PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L V+ IAAGM YL S +++H+DL ++N LV + V ++D GL R ++
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA- 198
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPY----WMAPEMMTGQEYDETVDVFSYGIV 309
Y ++GN WMAPE + ++ D++SYG+V
Sbjct: 199 ----------------------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 236
Query: 310 LCEIIGRVPADPDYLPRSPDFGLDQTD----FRNKFCASCPE--PFVRIAFL--CCDLNP 361
L E+ P G D RN+ CP+ P A + C + P
Sbjct: 237 LWEVFS--------YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFP 288
Query: 362 DQRPPFE 368
+RP F+
Sbjct: 289 SRRPRFK 295
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L S H N+++ + Y + L ++ E+ AGG + ++ + +PL Q +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ YLH +IHRDL + N L D + +ADFG++ A T +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQ----- 190
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMM-----TGQEYDETVDVFSYGIVLCEI 313
+G PYWMAPE++ + YD DV+S GI L E+
Sbjct: 191 --------RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 146 CGQVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-------DPG---- 193
G++ VL L HH N+I +G L L EY G L + L+ DP
Sbjct: 70 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 129
Query: 194 ----QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
L Q ++FA D+A GM YL IHR+L ++N LV E+ +ADFGL+R
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-- 187
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
Q T M ++P WMA E + Y DV+SYG++
Sbjct: 188 GQEVYVKKT-MGRLPVR-------------------WMAIESLNYSVYTTNSDVWSYGVL 227
Query: 310 LCEII 314
L EI+
Sbjct: 228 LWEIV 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
NG+ G +VA+LR L H NV+R + V R K+ LV E++
Sbjct: 41 NGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY 100
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P LP + R G+ +LH+ ++HRDL +N LV TV +ADFGLAR
Sbjct: 101 LDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I + MA P VV ++ APE++ Y VD++S G
Sbjct: 161 IY-------SYQMALDP---------------VVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 308 IVLCEIIGRVP 318
+ E+ R P
Sbjct: 199 CIFAEMFRRKP 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 24/169 (14%)
Query: 155 LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFARDIAAGMT 213
L+H NV++F G + L EY +GG L + ++ D G P P QR F + AG+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVV 119
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXX 273
YLH + + HRD+ +N L+ E + ++DFGLA + R ++ K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--ERLLNK----------- 166
Query: 274 XXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
+ G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 167 ------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 44 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 102
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 163 DSTXXKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 202
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 203 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
Query: 371 EVWLEGL 377
+ L +
Sbjct: 263 KAQLSTI 269
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 49 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 107
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 108 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 168 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 207
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 208 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
Query: 371 EVWLEGL 377
+ L +
Sbjct: 268 KAQLSTI 274
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 72 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 130
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 131 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 191 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 230
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 231 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
Query: 371 EVWLEGL 377
+ L +
Sbjct: 291 KAQLSTI 297
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
G+ G +VAVLR L H NV+R V R KL LV E++
Sbjct: 49 TGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P +P + + G+ +LHS ++HRDL QN LV + +ADFGLAR
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I+ A T+V+ + ++ APE++ Y VD++S G
Sbjct: 169 -IYSFQMALTSVVVTL---------------------WYRAPEVLLQSSYATPVDLWSVG 206
Query: 308 IVLCEIIGRVP-----ADPDY---------LPRSPDFGLDQTDFRNKFCASCPEPFVR-- 351
+ E+ R P +D D LP D+ D R F + +P +
Sbjct: 207 CIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 266
Query: 352 ---------IAFLCCDLNPDQR---------PPFEVLEVWLEGLSMHL 381
+ C NP +R P F+ LE E L HL
Sbjct: 267 TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHL 314
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 46 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 104
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 105 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 164
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 165 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 204
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 205 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
Query: 371 EVWLEGL 377
+ L +
Sbjct: 265 KAQLSTI 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 47 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 105
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 106 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 165
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 166 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 205
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 206 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
Query: 371 EVWLEGL 377
+ L +
Sbjct: 266 KAQLSTI 272
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 44 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 102
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 163 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 202
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 203 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
Query: 371 EVWLEGL 377
+ L +
Sbjct: 263 KAQLSTI 269
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 53/271 (19%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L ++ EY +GG L E + + G+ + F + + +G+
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGV 129
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y HSM + HRDL +N L+ + + DFG ++ ++H P+
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-------------- 175
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVL-CEIIGRVPADPDYLPR 326
+ VG P ++APE++ QEYD + DV+S G+ L ++G P + PR
Sbjct: 176 ----------STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225
Query: 327 SPDFGLDQTDFRNKFCA------SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
D+R S P+ +RI+ CC L + + + H
Sbjct: 226 ---------DYRKTIQRILSVKYSIPDD-IRISPECCHLISRIFVADPATRISIPEIKTH 275
Query: 381 LSVDKPLPSDLEADIYQFATRKSASPLTEPE 411
K LP+DL + S EPE
Sbjct: 276 SWFLKNLPADL------MNESNTGSQFQEPE 300
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 41 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 99
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 100 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 160 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 199
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 200 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
Query: 371 EVWLEGL 377
+ L +
Sbjct: 260 KAQLSTI 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 44 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 102
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 163 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 202
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 203 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
Query: 371 EVWLEGL 377
+ L +
Sbjct: 263 KAQLSTI 269
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+++ L+ L H ++I+ V+ + +V EY G +++ G+R F +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRR--FFQQ 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + Y H ++HRDL +N L+ ++ V +ADFGL+ I+ G T+
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--------- 167
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVL-CEIIGRVPADPDYLP 325
G+P + APE++ G+ Y VDV+S GIVL ++GR+P D +++P
Sbjct: 168 -------------CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 248
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 303
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E++
Sbjct: 304 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---G 343
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 344 EPPYFNEPP 352
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 190 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 231 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 275
Query: 371 EVWL 374
+L
Sbjct: 276 RDFL 279
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 109
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 110 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDET-VDVFSYGIVLCEIIG 315
T + + ++ APE++ G +Y T VD++S G + E++
Sbjct: 168 THEVVTL---------------------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
Query: 316 R 316
R
Sbjct: 207 R 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ ++ S+ H +++R +GV + LVT+ + G L E + + + +N+
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 125
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
IA GM YL L+HRDL ++N LV+ V + DFGLAR++ + K+P
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK- 184
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
WMA E + +++ DV+SYG+ + E++ D +P
Sbjct: 185 ------------------WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 226
Query: 328 PDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
L + R C + C ++ D RP F+ L
Sbjct: 227 EIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDET-VDVFSYGIVLCEIIG 315
T + + ++ APE++ G +Y T VD++S G + E++
Sbjct: 161 THEVVTL---------------------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 180 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 221 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 265
Query: 371 EVWL 374
+L
Sbjct: 266 RDFL 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 24/225 (10%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ ++ S+ H +++R +GV + LVT+ + G L E + + + +N+
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 148
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
IA GM YL L+HRDL ++N LV+ V + DFGLAR++ + K+P
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK- 207
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
WMA E + +++ DV+SYG+ + E++ G P D
Sbjct: 208 ------------------WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 249
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
PD L + R C + C ++ D RP F+ L
Sbjct: 250 EIPD--LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 32/177 (18%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L +V EY +GG L E + + G+ + F + + +G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGV 128
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y H+M + HRDL +N L+ + +ADFG ++ ++H P+
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK-------------- 174
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-DVFSYGIVL-CEIIGRVP-ADPD 322
+ VG P ++APE++ +EYD V DV+S G+ L ++G P DP+
Sbjct: 175 ----------SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 184 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 225 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 269
Query: 371 EVWL 374
+L
Sbjct: 270 RDFL 273
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 67/266 (25%)
Query: 112 SACDVMLDNWYFEKDGLLFCKEDYNGKYG----------------------EACQNCGQV 149
S D+ +N YF+ L + G++G ++ QN +V
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEV 69
Query: 150 AVLRSLHHHNVIRFIGVLYK----DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
L + H N+++FIG + D L L+T + G+L + L+ + W + + A
Sbjct: 70 YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHIA 127
Query: 206 RDIAAGMTYLH----------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+A G+ YLH + HRD+ S+N L++ + T +ADFGLA G A
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-----QEYDETVDVFSYGIVL 310
T + VG +MAPE++ G ++ +D+++ G+VL
Sbjct: 188 GDT-------------------HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
Query: 311 CEIIGRV-----PADPDYLPRSPDFG 331
E+ R P D LP + G
Sbjct: 229 WELASRCTAADGPVDEYMLPFEEEIG 254
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 190 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 231 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 275
Query: 371 EVWL 374
+L
Sbjct: 276 RDFL 279
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 180 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 221 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 265
Query: 371 EVWL 374
+L
Sbjct: 266 RDFL 269
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 171
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 226
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E++
Sbjct: 227 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---G 266
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 267 EPPYFNEPP 275
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 126
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 127 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 181
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E++
Sbjct: 182 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---G 221
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 222 EPPYFNEPP 230
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 117
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 118 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 172
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E+ V
Sbjct: 173 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM---VDG 212
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 213 EPPYFNEPP 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 180 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 221 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 265
Query: 371 EVWL 374
+L
Sbjct: 266 RDFL 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 128
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 129 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 183
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E++
Sbjct: 184 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---G 223
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 224 EPPYFNEPP 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V + SL H N+IR GV+ + +VTE G+L + L+ G +A
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG-PRAPTTVMAKVPXX 266
+A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-------------- 312
W APE + + + D + +G+ L E
Sbjct: 184 -------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 313 --IIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
I+ ++ + + LPR D CP+ + C P+ RP F L
Sbjct: 225 SQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTFVAL 269
Query: 371 EVWL 374
+L
Sbjct: 270 RDFL 273
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+++ HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 103 PLIKSYLF--QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 161 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 42/189 (22%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V ++R H NV+ +L +V E++ GG L +++ R+N
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMN-EEQ 121
Query: 208 IAA-------GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTV 259
IAA ++ LH+ +IHRD+ S + L+ D V ++DFG A++ + PR
Sbjct: 122 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----- 176
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+VG PYWMAPE+++ Y VD++S GI++ E+ V
Sbjct: 177 -----------------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM---VDG 216
Query: 320 DPDYLPRSP 328
+P Y P
Sbjct: 217 EPPYFNEPP 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 424 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 482
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV + V + DFGL+R +
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 543 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 582
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 583 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
Query: 371 EVWLEGL 377
+ L +
Sbjct: 643 KAQLSTI 649
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 109
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 110 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 168 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
Query: 316 R 316
R
Sbjct: 207 R 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 44 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 102
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV V + DFGL+R +
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 162
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 163 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 202
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 203 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
Query: 371 EVWLEGL 377
+ L +
Sbjct: 263 KAQLSTI 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 99 GESYALVERSILCSACDVML---DNWYFEKDGLLFCKEDYN-GKYGEACQNC-------- 146
GESY V + + +V+L N + EK + K ++ G+Y + +N
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
++++L+SL H N+I+ V + LVTE+ GG L E + + N +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMK 153
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV---VADFGLARIIHQGPRAPTTVMAKV 263
I +G+ YLH N++HRD+ +N L+ +++ + DFGL+ + +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR----- 208
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ ++Y+E DV+S G+++
Sbjct: 209 -----------------LGTAYYIAPEVLK-KKYNEKCDVWSCGVIM 237
>pdb|1X6A|A Chain A, Solution Structures Of The Second Lim Domain Of Human Lim-
Kinase 2 (limk2)
Length = 81
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 53 EDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSIL-C 111
+DY GK+GE C C +M+GP MV G+ K+HPECF C SC I DG++YALV+ + L C
Sbjct: 8 KDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYC 67
Query: 112 SAC 114
C
Sbjct: 68 GKC 70
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 101
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 102 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 160 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 316 R 316
R
Sbjct: 199 R 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 103
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 104 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 162 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 316 R 316
R
Sbjct: 201 R 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 161 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 101
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 102 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 160 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 316 R 316
R
Sbjct: 199 R 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 161 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 101
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 102 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 160 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 316 R 316
R
Sbjct: 199 R 199
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 35/241 (14%)
Query: 146 CGQVAVLRSLHHHNVIRF-------------IGVLYKDRKLNLVTEYIAGGTLKELLQDP 192
+V +L SL+H V+R+ + + K L + EY TL +L+
Sbjct: 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE 109
Query: 193 GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
+ R I ++Y+HS +IHRDL N + E + V + DFGLA+ +H+
Sbjct: 110 NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLC 311
+P + +G ++A E++ G Y+E +D++S GI+
Sbjct: 170 LDILKLDSQNLPGSSDNLT-------SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 312 EII-------GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
E+I RV S +F D D + K +I L D +P++R
Sbjct: 223 EMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEK-------KIIRLLIDHDPNKR 275
Query: 365 P 365
P
Sbjct: 276 P 276
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 106
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 107 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 165 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 316 R 316
R
Sbjct: 204 R 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
T + + ++ APE++ G + Y VD++S G + E++
Sbjct: 161 THEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+P+ ++++ +A GM +L S IHRDL ++N L+ E+ V + DFGLAR I++ P
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
++P WMAPE + + Y DV+SYG++L EI
Sbjct: 254 DYVRKGDTRLPLK-------------------WMAPESIFDKIYSTKSDVWSYGVLLWEI 294
Query: 314 --IGRVPADPDYLPRSPDFGLDQ---TDFRNKFCASCPE----PFVRIAFLCCDLNPDQR 364
+G P P +D+ + R PE +I C +P +R
Sbjct: 295 FSLGGSPY--------PGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER 346
Query: 365 PPFEVL 370
P F L
Sbjct: 347 PRFAEL 352
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 25/165 (15%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
+L + H +IR G +++ ++ +YI GG L LL+ Q P +A ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCL 117
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLHS ++I+RDL +N L+ ++ + + DFG A+ +
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV--------------------- 156
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
Y + G P ++APE+++ + Y++++D +S+GI++ E++
Sbjct: 157 ---PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAG--GTLKELLQDPGQPLP 197
G ++++L+ L+H N+++ + V++ + KL LV E++ T + G PLP
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP 102
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ F + G+ + HS ++HRDL QN L+ + + +ADFGLAR R T
Sbjct: 103 LIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGR 316
+ + ++ APE++ G + Y VD++S G + E++ R
Sbjct: 161 HEVVTL---------------------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 207
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I +G+ +LH N+I+RDL +N L+ +D V ++D GLA + G
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--------------- 342
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
G P +MAPE++ G+EYD +VD F+ G+ L E+I
Sbjct: 343 ------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
G+ G +VAVLR L H NV+R V R KL LV E++
Sbjct: 49 TGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P +P + + G+ +LHS ++HRDL QN LV + +ADFGLAR
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I+ A T+V+ + ++ APE++ Y VD++S G
Sbjct: 169 -IYSFQMALTSVVVTL---------------------WYRAPEVLLQSSYATPVDLWSVG 206
Query: 308 IVLCEIIGRVP 318
+ E+ R P
Sbjct: 207 CIFAEMFRRKP 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 207
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I +G+ +LH N+I+RDL +N L+ +D V ++D GLA + G
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--------------- 342
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
G P +MAPE++ G+EYD +VD F+ G+ L E+I
Sbjct: 343 ------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PL
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPL 104
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 105 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 155
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 156 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 316 R 316
R
Sbjct: 202 R 202
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 207
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I +G+ +LH N+I+RDL +N L+ +D V ++D GLA + G
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--------------- 342
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
G P +MAPE++ G+EYD +VD F+ G+ L E+I
Sbjct: 343 ------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PL
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPL 105
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 106 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 156
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 157 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 316 R 316
R
Sbjct: 203 R 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR---VNFARD 207
+L +H ++ L LV + GG ++ + + + P Q + +
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I +G+ +LH N+I+RDL +N L+ +D V ++D GLA + G
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--------------- 342
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
G P +MAPE++ G+EYD +VD F+ G+ L E+I
Sbjct: 343 ------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 136 NGKYGEACQNCGQVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKE 187
G+ G +VAVLR L H NV+R V R KL LV E++
Sbjct: 49 TGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108
Query: 188 LLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
L + P +P + + G+ +LHS ++HRDL QN LV + +ADFGLAR
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 248 IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
I+ A T+V+ + ++ APE++ Y VD++S G
Sbjct: 169 -IYSFQMALTSVVVTL---------------------WYRAPEVLLQSSYATPVDLWSVG 206
Query: 308 IVLCEIIGRVP 318
+ E+ R P
Sbjct: 207 CIFAEMFRRKP 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 141 EACQNCGQVAV----------LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ 190
+ C+NC +V +R H ++++ IGV+ ++ + ++ E G L+ LQ
Sbjct: 424 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQ 482
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
L + +A ++ + YL S +HRD+ ++N LV V + DFGL+R +
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 542
Query: 251 QGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ K+P WMAPE + + + DV+ +G+ +
Sbjct: 543 DSTYYKAS-KGKLPIK-------------------WMAPESINFRRFTSASDVWMFGVCM 582
Query: 311 CEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
EI+ + + G + R +CP + C +P +RP F L
Sbjct: 583 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
Query: 371 EVWLEGL 377
+ L +
Sbjct: 643 KAQLSTI 649
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 30/179 (16%)
Query: 148 QVAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQDPGQPLPWG 199
+VA+LR L H NV+R + V R K+ LV E++ L + P LP
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ R G+ +LH+ ++HRDL +N LV TV +ADFGLARI +
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQ 173
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
MA P VV ++ APE++ Y VD++S G + E+ R P
Sbjct: 174 MALTP---------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 132 KEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD 191
K Y + QN +V + L H +++ + LV E G + L++
Sbjct: 47 KAMYKAGMVQRVQN--EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN 104
Query: 192 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
+P + +F I GM YLHS ++HRDL N L+ + + +ADFGLA
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA----- 159
Query: 252 GPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVL 310
K+P YT+ G P +++PE+ T + DV+S G +
Sbjct: 160 -------TQLKMP---------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFY 203
Query: 311 CEIIGRVPADPD 322
+IGR P D D
Sbjct: 204 TLLIGRPPFDTD 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 76 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 190
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 191 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 236 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 64 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 178
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 179 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 224 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 186
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 187 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 232 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 187
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 188 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 233 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 187
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 188 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 233 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 95 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 209
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 210 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 255 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 191
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 192 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 237 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 191
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 192 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 237 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 67 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 181
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 182 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 227 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 266
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 104
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 105 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 155
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 156 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 316 R 316
R
Sbjct: 202 R 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ Y H ++HRDL QN L+ + + +ADFGLAR R T + +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL---- 164
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADP 321
++ AP+++ G ++Y T+D++S G + E++ P P
Sbjct: 165 -----------------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 105
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 106 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 156
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 157 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 316 R 316
R
Sbjct: 203 R 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 104
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 105 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 155
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 156 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 316 R 316
R
Sbjct: 202 R 202
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 101
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 102 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 152
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 153 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 316 R 316
R
Sbjct: 199 R 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 46/247 (18%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQRVNF 204
++ +L+ L+H NVI++ +D +LN+V E G L ++ + + +P +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ + + ++HS ++HRD+ N + V + D GL R A
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--------- 192
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
+++VG PY+M+PE + Y+ D++S G +L E+
Sbjct: 193 ------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL-------- 232
Query: 325 PRSPDFG-----------LDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
+SP +G ++Q D+ E ++ +C + +P++RP +V V+
Sbjct: 233 -QSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP--DVTYVY 289
Query: 374 LEGLSMH 380
MH
Sbjct: 290 DVAKRMH 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 153
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 154 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 153
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 154 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 153
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 154 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 28/173 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPLPWGQRVNF 204
++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PLP + F
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLF 110
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ G+ + HS ++HRDL QN L+ + + +ADFGLAR VP
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------------GVP 156
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGR 316
V ++ APE++ G + Y VD++S G + E++ R
Sbjct: 157 VRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 106
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 107 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 157
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 158 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Query: 316 R 316
R
Sbjct: 204 R 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 101
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 102 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 152
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 153 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 316 R 316
R
Sbjct: 199 R 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 105
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 106 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 156
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 157 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 316 R 316
R
Sbjct: 203 R 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 103
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 104 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 154
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 155 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 316 R 316
R
Sbjct: 201 R 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ Y H ++HRDL QN L+ + + +ADFGLAR R T + +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL---- 164
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADP 321
++ AP+++ G ++Y T+D++S G + E++ P P
Sbjct: 165 -----------------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++L+ L H N+++ V++ ++L LV E++ LK+LL L +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ Y H ++HRDL QN L+ + + +ADFGLAR R T + +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL---- 164
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADP 321
++ AP+++ G ++Y T+D++S G + E++ P P
Sbjct: 165 -----------------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFP 202
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I A+
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI L E+ +G P
Sbjct: 232 LPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY- 271
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P S + + + FR P I C D +P +RP F+
Sbjct: 272 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAG--GTLKELLQDPGQPLP 197
G ++++L+ L+H N+++ + V++ + KL LV E++ T + G PLP
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 107 LIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------- 156
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGR 316
VP V ++ APE++ G + Y VD++S G + E++ R
Sbjct: 157 ----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPL 105
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 106 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 156
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 157 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 316 R 316
R
Sbjct: 203 R 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 21/224 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ ++++L H ++++ IG++ ++ ++ E G L L+ L V ++
Sbjct: 58 SEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I M YL S+N +HRD+ +N LV + V + DFGL+R I +V ++P
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 175
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
WM+PE + + + DV+ + + + EI+ +L
Sbjct: 176 -------------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
G+ + R CP + C D +P RP F L
Sbjct: 217 KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 33/177 (18%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA-- 205
+VAVL+ L H N+++ R LV E GG EL + + + + V+ A
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG---ELFDEIIHRMKFNE-VDAAVI 141
Query: 206 -RDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMA 261
+ + +G+TYLH N++HRDL +N L+ +D + + DFGL+ + +
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER--- 198
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ ++YDE DV+S G++L ++ P
Sbjct: 199 -------------------LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 103
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 104 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------- 154
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 155 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 316 R 316
R
Sbjct: 201 R 201
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 21/224 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ ++++L H ++++ IG++ ++ ++ E G L L+ L V ++
Sbjct: 74 SEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I M YL S+N +HRD+ +N LV + V + DFGL+R I +V ++P
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 191
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
WM+PE + + + DV+ + + + EI+ +L
Sbjct: 192 -------------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
G+ + R CP + C D +P RP F L
Sbjct: 233 KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 276
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 21/224 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ ++++L H ++++ IG++ ++ ++ E G L L+ L V ++
Sbjct: 62 SEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
I M YL S+N +HRD+ +N LV + V + DFGL+R I +V ++P
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
WM+PE + + + DV+ + + + EI+ +L
Sbjct: 180 -------------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
Query: 327 SPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
G+ + R CP + C D +P RP F L
Sbjct: 221 KDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I A+
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI L E+ +G P
Sbjct: 227 LPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY- 266
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P S + + + FR P I C D +P +RP F+
Sbjct: 267 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 314
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I A+
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI L E+ +G P
Sbjct: 209 LPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY- 248
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
P S + + + FR P I C D +P +RP F+ + +E
Sbjct: 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I A+
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI L E+ +G P
Sbjct: 232 LPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY- 271
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P S + + + FR P I C D +P +RP F+
Sbjct: 272 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 32/177 (18%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L +V EY +GG L E + + G+ + F + + +G+
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGV 127
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y H+M + HRDL +N L+ + + DFG ++ ++H P+
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-------------- 173
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-DVFSYGIVL-CEIIGRVP-ADPD 322
+ VG P ++APE++ +EYD V DV+S G+ L ++G P DP+
Sbjct: 174 ----------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 187
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 188 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 233 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 32/177 (18%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L +V EY +GG L E + + G+ + F + + +G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGV 128
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y H+M + HRDL +N L+ + + DFG ++ ++H P+
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-------------- 174
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-DVFSYGIVL-CEIIGRVP-ADPD 322
+ VG P ++APE++ +EYD V DV+S G+ L ++G P DP+
Sbjct: 175 ----------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PL
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPL 105
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL +N L+ + + +ADFGLAR
Sbjct: 106 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF------- 156
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 157 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 316 R 316
R
Sbjct: 203 R 203
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ +L +V E GG L E+++ R+ +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI--IK 128
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H N++HRDL +N L+ +D + + DFGL+ Q +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----- 183
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ G YDE DV+S G++L ++ P
Sbjct: 184 -----------------IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTP 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E+++ LK+ + G PL
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPL 103
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL +N L+ + + +ADFGLAR
Sbjct: 104 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF------- 154
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 155 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 316 R 316
R
Sbjct: 201 R 201
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I A+
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI--IGRVPAD 320
+P WMAPE + Y DV+SYGI L E+ +G P
Sbjct: 225 LPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY- 264
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFE 368
P S + + + FR P I C D +P +RP F+
Sbjct: 265 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 312
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 104 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 218
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 219 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 264 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 303
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 80 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 194
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 195 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 240 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 25/240 (10%)
Query: 133 EDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 192
ED +G+ +A+ SL H +++R +G L L LVT+Y+ G+L + ++
Sbjct: 51 EDKSGRQSFQAVTDHMLAI-GSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQH 108
Query: 193 GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
L +N+ IA GM YL ++HR+L ++N L++ V VADFG+A ++
Sbjct: 109 RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
+ AK P WMA E + +Y DV+SYG+ + E
Sbjct: 169 DKQLLYSEAKTPIK-------------------WMALESIHFGKYTHQSDVWSYGVTVWE 209
Query: 313 II--GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
++ G P L PD L + R C + C ++ + RP F+ L
Sbjct: 210 LMTFGAEPYAGLRLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
KL V +YI GG L LQ L R +A +IA+ + YLHS+N+++RDL +N L
Sbjct: 113 KLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHSLNIVYRDLKPENIL 171
Query: 232 VREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
+ +V+ DFGL + I H + T G P ++AP
Sbjct: 172 LDSQGHIVLTDFGLCKENIEHNSTTS-----------------------TFCGTPEYLAP 208
Query: 290 EMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
E++ Q YD TVD + G VL E++ +P
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQD------PGQP-------LPWGQR 201
HH NV+ +G K L ++ E+ G L L+ P +P L
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I + P A
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
++P WMAPE + + Y DV+S+G++L EI
Sbjct: 211 RLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 25/240 (10%)
Query: 133 EDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP 192
ED +G+ +A+ SL H +++R +G L L LVT+Y+ G+L + ++
Sbjct: 69 EDKSGRQSFQAVTDHMLAI-GSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQH 126
Query: 193 GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
L +N+ IA GM YL ++HR+L ++N L++ V VADFG+A ++
Sbjct: 127 RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
+ AK P WMA E + +Y DV+SYG+ + E
Sbjct: 187 DKQLLYSEAKTPIK-------------------WMALESIHFGKYTHQSDVWSYGVTVWE 227
Query: 313 II--GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
++ G P L PD L + R C + C ++ + RP F+ L
Sbjct: 228 LMTFGAEPYAGLRLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ +L +V E GG L E+++ R+ +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI--IK 128
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H N++HRDL +N L+ +D + + DFGL+ Q +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----- 183
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ G YDE DV+S G++L ++ P
Sbjct: 184 -----------------IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTP 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 132
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 186
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 187 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 317 VPADPD 322
P + +
Sbjct: 230 PPFEAN 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
+GD F K IG G + I+C+A D +L+ N +K F + +
Sbjct: 15 IGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAILERNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQ 194
A + ++ +++ ++H N+I + V + L + YI + L Q
Sbjct: 67 ------AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 195 PLPWGQRVNFA-RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+R+++ + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----- 175
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
A T+ M Y V Y+ APE++ G Y E VD++S G+++ E+
Sbjct: 176 -AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 314 I 314
I
Sbjct: 219 I 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ +L +V E GG L E+++ R+ +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI--IK 128
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H N++HRDL +N L+ +D + + DFGL+ Q +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----- 183
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ G YDE DV+S G++L ++ P
Sbjct: 184 -----------------IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTP 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 35/241 (14%)
Query: 146 CGQVAVLRSLHHHNVIRFIGVLYKDRK-------------LNLVTEYIAGGTLKELLQDP 192
+V +L SL+H V+R+ + R L + EY TL +L+
Sbjct: 50 LSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE 109
Query: 193 GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG 252
+ R I ++Y+HS +IHR+L N + E + V + DFGLA+ +H+
Sbjct: 110 NLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLC 311
+P + +G ++A E++ G Y+E +D +S GI+
Sbjct: 170 LDILKLDSQNLPGSSDNLT-------SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
Query: 312 EII-------GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
E I RV S +F D D + K +I L D +P++R
Sbjct: 223 EXIYPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEK-------KIIRLLIDHDPNKR 275
Query: 365 P 365
P
Sbjct: 276 P 276
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 104
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL +N L+ + + +ADFGLAR
Sbjct: 105 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF------- 155
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 156 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 316 R 316
R
Sbjct: 202 R 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPL 102
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL +N L+ + + +ADFGLAR
Sbjct: 103 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF------- 153
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 154 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 316 R 316
R
Sbjct: 200 R 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP---GQPL 196
G ++++L+ L+H N+++ + V++ + KL LV E++ LK+ + G PL
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL 103
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
P + F + G+ + HS ++HRDL +N L+ + + +ADFGLAR
Sbjct: 104 PLIKSYLF--QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF------- 154
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
VP V ++ APE++ G + Y VD++S G + E++
Sbjct: 155 -----GVPVRTYXHE---------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 316 R 316
R
Sbjct: 201 R 201
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 45/242 (18%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLY--KDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
G Q ++A+L+ L H NV++ + VL + L +V E + G + E+ +PL
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLS 135
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
Q + +D+ G+ YLH +IHRD+ N LV ED + +ADFG++ +G A
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALL 194
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEY---DETVDVFSYGIVL-CEI 313
+ VG P +MAPE ++ + +DV++ G+ L C +
Sbjct: 195 S--------------------NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 314 IGRVP--------------ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDL 359
G+ P + P PD D D + PE RI L
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPES--RIVVPEIKL 292
Query: 360 NP 361
+P
Sbjct: 293 HP 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGMT 213
H +++ IG + ++ L+ +Y+ G LK L P + W QR+ A G+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXX 273
YLH+ +IHRD+ S N L+ E+ + DFG+++ +G T + V
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELDQTHLXXV---------- 200
Query: 274 XXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
V G ++ PE E DV+S+G+VL E++ A LPR
Sbjct: 201 ------VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 207 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGMT 213
H +++ IG + ++ L+ +Y+ G LK L P + W QR+ A G+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXX 273
YLH+ +IHRD+ S N L+ E+ + DFG+++ +G T + V
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELGQTHLXXV---------- 200
Query: 274 XXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
V G ++ PE E DV+S+G+VL E++ A LPR
Sbjct: 201 ------VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 199
G+ ++AVLR + H N++ + L LV + ++GG L + + + G
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-K 120
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAP 256
R + + YLH M ++HRDL +N L E+ ++++DFGL+++ +G
Sbjct: 121 DASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG---- 176
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
VM+ T G P ++APE++ + Y + VD +S G++
Sbjct: 177 -DVMS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 111
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 165
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 166 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 209 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP-----------LPWGQRVN 203
HH NV+ +G K L ++ E+ G L L+ L +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
P WMAPE + + Y DV+S+G++L EI + A P
Sbjct: 209 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASP-- 246
Query: 324 LPRSPDFGLDQTDFRNKFCA---------SCPEPFVRIAFLCCDLNPDQRPPFEVL 370
P +D+ +F + + PE + + C P QRP F L
Sbjct: 247 ---YPGVKIDE-EFXRRLKEGTRMRAPDYTTPEMY-QTMLDCWHGEPSQRPTFSEL 297
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 71 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 185
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 186 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 231 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 65 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 123
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 177
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 178 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 221 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ A + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRA-----------------ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPD 322
P + +
Sbjct: 204 PPFEAN 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 110
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 164
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 165 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 208 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ A + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 SRRA-----------------ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 207 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 186
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 187 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 232 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 191
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 192 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 237 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 207 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 187
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 188 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 233 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 71 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 185
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 186 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 231 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 47 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 105
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 106 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 159
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 160 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 203 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 74 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 188
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 189 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 234 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 47/245 (19%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
VGD F K IG G + I+C+A D +LD N +K F + +
Sbjct: 15 VGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL 189
A + ++ +++ ++H N+I + V + L LV E + L +++
Sbjct: 67 ------AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI 119
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
Q L + + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 120 Q---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
A T+ M Y V Y+ APE++ G Y E VD++S G +
Sbjct: 176 -----AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGCI 214
Query: 310 LCEII 314
+ E++
Sbjct: 215 MGEMV 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 45 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 103
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 157
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 158 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 201 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FD 110
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + + +ADFG + +H AP+
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VH----APS 164
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
+ T+ G ++ PEM+ G+ +DE VD++S G++ E + +
Sbjct: 165 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
Query: 318 P 318
P
Sbjct: 208 P 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 191
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 192 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 237 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 107
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 161
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 162 SRRD-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 205 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ A + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRA-----------------ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 184
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 185 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 230 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 199
G C +V++L+ L H N++ +++ ++ L LV EY+ LK+ L D G +
Sbjct: 42 GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH 100
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
F + G+ Y H ++HRDL QN L+ E + +ADFGLAR
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY G + + LQ +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FD 111
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 165
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 166 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 209 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++TE+ G L L+ L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 200 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 32/168 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR--VNFA 205
++ VL L H N+I+ + +++LV E + GG L + + + G + +R +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAV 154
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVRE---DKTVVVADFGLARII-HQGPRAPTTVMA 261
+ I + YLH ++HRDL +N L D + +ADFGL++I+ HQ V+
Sbjct: 155 KQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ-------VLM 207
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
K TV G P + APE++ G Y VD++S GI+
Sbjct: 208 K----------------TVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP-----------LPWGQRVN 203
HH NV+ +G K L ++ E+ G L L+ L +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
P WMAPE + + Y DV+S+G++L EI
Sbjct: 209 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+++ LR L H ++I+ V+ ++ +V EY ++Q +R F +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL +N L+ E V +ADFGL+ I+ G T+
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--------- 172
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII-GRVPADPDYLP 325
G+P + APE+++G+ Y VDV+S G++L ++ R+P D + +P
Sbjct: 173 -------------CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+++ LR L H ++I+ V+ ++ +V EY ++Q +R F +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 120
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL +N L+ E V +ADFGL+ I+ G T+
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--------- 171
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII-GRVPADPDYLP 325
G+P + APE+++G+ Y VDV+S G++L ++ R+P D + +P
Sbjct: 172 -------------CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FD 110
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + + +ADFG + +H AP+
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS--VH----APS 164
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
+ T+ G ++ PEM+ G+ +DE VD++S G++ E + +
Sbjct: 165 SRRD-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
Query: 318 P 318
P
Sbjct: 208 P 208
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 202
++A+L L+H +V++ + ++ K +L +V E IA K+L + P L
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVY-LTELHIK 159
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ----------G 252
++ G+ Y+HS ++HRDL NCLV +D +V V DFGLAR +
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 253 PRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLC 311
PR + P T ++ APE++ QE Y E +DV+S G +
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVT----RWYRAPELILLQENYTEAIDVWSIGCIFA 275
Query: 312 EIIGRVPADPDY 323
E++ + + Y
Sbjct: 276 ELLNMIKENVAY 287
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 186
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 187 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 232 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++TE+ G L L+ L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 200 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 111
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 165
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PE + G+ +DE VD++S G++ E ++G+
Sbjct: 166 SRRT-----------------TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 209 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 47/245 (19%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
VGD F K IG G + I+C+A D +LD N +K F + +
Sbjct: 15 VGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL 189
A + ++ +++ ++H N+I + V + L LV E + L +++
Sbjct: 67 ------AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI 119
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
Q L + + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 120 Q---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
A T+ M Y V Y+ APE++ G Y E VD++S G +
Sbjct: 176 -----AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGCI 214
Query: 310 LCEII 314
+ E++
Sbjct: 215 MGEMV 219
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+++ LR L H ++I+ V+ ++ +V EY ++Q +R F +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 115
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL +N L+ E V +ADFGL+ I+ G T+
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--------- 166
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII-GRVPADPDYLP 325
G+P + APE+++G+ Y VDV+S G++L ++ R+P D + +P
Sbjct: 167 -------------CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+++ LR L H ++I+ V+ ++ +V EY ++Q +R F +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARR--FFQQ 111
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y H ++HRDL +N L+ E V +ADFGL+ I+ G T+
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--------- 162
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII-GRVPADPDYLP 325
G+P + APE+++G+ Y VDV+S G++L ++ R+P D + +P
Sbjct: 163 -------------CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 31/194 (15%)
Query: 134 DYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 193
D GK QN L+ H ++I+ V+ + +V EY++GG L + + G
Sbjct: 58 DVVGKIRREIQN------LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG 111
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+ L + + I +G+ Y H ++HRDL +N L+ +ADFGL+ ++ G
Sbjct: 112 R-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCE 312
+ G+P + APE+++G+ Y VD++S G++L
Sbjct: 171 FLRXS----------------------CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA 208
Query: 313 II-GRVPADPDYLP 325
++ G +P D D++P
Sbjct: 209 LLCGTLPFDDDHVP 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
FA +A GM +L + +HRDL ++N LV K V + DFGLAR I A++
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 236
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR------- 316
P WMAPE + Y DV+SYGI+L EI
Sbjct: 237 PVK-------------------WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
+P D ++ + L Q F+ E I C + +RP F L +L
Sbjct: 278 IPVDANF------YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 47/245 (19%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
VGD F K IG G + I+C+A D +LD N +K F + +
Sbjct: 8 VGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 59
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL 189
A + ++ +++ ++H N+I + V + L LV E + L +++
Sbjct: 60 ------AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI 112
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
Q L + + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 113 Q---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 168
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
A T+ M Y V Y+ APE++ G Y E VD++S G +
Sbjct: 169 -----AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGCI 207
Query: 310 LCEII 314
+ E++
Sbjct: 208 MGEMV 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 50 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 108
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +A+FG + +H AP+
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VH----APS 162
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 163 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 206 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 107
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + AP+
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------CHAPS 161
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 162 SRRT-----------------TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 205 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+VAVL+ L H N+++ R LV E GG L E++ Q +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSEVDAAVIMK 111
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G TYLH N++HRDL +N L+ D + + DFGL+ G +
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----- 166
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ ++YDE DV+S G++L
Sbjct: 167 -----------------LGTAYYIAPEVLR-KKYDEKCDVWSCGVIL 195
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 23/147 (15%)
Query: 173 LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
L V EY+ GG L +Q + +A +I G+ +LHS +++RDL N L+
Sbjct: 93 LFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+D + +ADFG+ + G A T G P ++APE++
Sbjct: 152 DKDGHIKIADFGMCKENMLGD-AKTNXFC--------------------GTPDYIAPEIL 190
Query: 293 TGQEYDETVDVFSYGIVLCE-IIGRVP 318
GQ+Y+ +VD +S+G++L E +IG+ P
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 47/245 (19%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
VGD F K IG G + I+C+A D +LD N +K F + +
Sbjct: 15 VGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL 189
A + ++ +++ ++H N+I + V + L LV E + L +++
Sbjct: 67 ------AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVI 119
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
Q L + + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 120 Q---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
A T+ M Y V Y+ APE++ G Y E VD++S G +
Sbjct: 176 -----AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGCI 214
Query: 310 LCEII 314
+ E++
Sbjct: 215 MGEMV 219
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRTE-----------------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++TE+ G L L+ L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I + P
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 200 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARD------ 207
HH NV+ +G K L ++ E+ G L L+ + +P+ + +D
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 208 -------IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
+A GM +L S IHRDL ++N L+ E V + DFGLAR I + P
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 210 ARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +A+FG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ T+ G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 SRRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 207 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+VAVL+ L H N+++ R LV E GG L E++ Q +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMK 128
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G TYLH N++HRDL +N L+ D + + DFGL+ G +
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----- 183
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ ++YDE DV+S G++L
Sbjct: 184 -----------------LGTAYYIAPEVLR-KKYDEKCDVWSCGVIL 212
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 32/177 (18%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L +V EY +GG L E + + G+ + F + + +G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGV 128
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y H+M + HRDL +N L+ + + FG ++ ++H P+
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK-------------- 174
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-DVFSYGIVL-CEIIGRVP-ADPD 322
+ VG P ++APE++ +EYD V DV+S G+ L ++G P DP+
Sbjct: 175 ----------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 130 FCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
KE GK G + +N ++AVL + H N++ + L L+ + ++GG L + +
Sbjct: 51 IAKEALEGKEG-SMEN--EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 190 QDPGQPLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL---VREDKTVVVADFGL 245
+ G R+ F + + YLH + ++HRDL +N L + ED ++++DFGL
Sbjct: 108 VEKGFYTERDASRLIFQ--VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+++ P +V++ T G P ++APE++ + Y + VD +S
Sbjct: 166 SKM-----EDPGSVLS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 306 YGIV 309
G++
Sbjct: 204 IGVI 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 23/147 (15%)
Query: 173 LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
L V EY+ GG L +Q + +A +I G+ +LHS +++RDL N L+
Sbjct: 94 LFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+D + +ADFG+ + G A T G P ++APE++
Sbjct: 153 DKDGHIKIADFGMCKENMLGD-AKTN--------------------EFCGTPDYIAPEIL 191
Query: 293 TGQEYDETVDVFSYGIVLCE-IIGRVP 318
GQ+Y+ +VD +S+G++L E +IG+ P
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 50 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 108
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 162
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 163 S-----------------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 206 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 25/227 (11%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ ++ L + ++R IGV + L LV E GG L + L + +P
Sbjct: 60 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA-KVPXX 266
++ GM YL N +HRDL ++N L+ ++DFGL++ + T A K P
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W APE + +++ DV+SYG+ + E + G+ P
Sbjct: 179 -------------------WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
Query: 325 PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
P F ++Q R + CP + C + RP F +E
Sbjct: 220 PEVMAF-IEQGK-RMECPPECPPELYALMSDCWIYKWEDRPDFLTVE 264
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQR------------ 201
HH NV+ +G K L ++ E+ G L L+ + +P+ +
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 202 --VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 211 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 246
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 107
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 161
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 162 SRRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 205 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
+GD F K IG G + I+C+A D +L+ N +K F + +
Sbjct: 15 IGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAILERNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQ 194
A + ++ +++ ++H N+I + V + L + YI + L Q
Sbjct: 67 ------AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 195 PLPWGQRVNFA-RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+R+++ + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----- 175
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
A T+ M Y V Y+ APE++ G Y E VD++S G ++ E+
Sbjct: 176 -AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 314 I 314
I
Sbjct: 219 I 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 111
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 165
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 166 SRRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 209 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWG 199
G ++++++ L H N++R V++ + KL LV E++ K + P G
Sbjct: 45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG 104
Query: 200 QRVN----FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+N F + G+ + H ++HRDL QN L+ + + + DFGLAR
Sbjct: 105 LELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG----I 160
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
P + + V ++ AP+++ G + Y ++D++S G +L E+I
Sbjct: 161 PVNTFS-----------------SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203
Query: 315 GRVPADP 321
P P
Sbjct: 204 TGKPLFP 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
+GD F K IG G + I+ +A D +L+ N +K F + +
Sbjct: 15 IGDSTF--TVLKRYQNLKPIGSGA------QGIVVAAYDAILERNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQ 194
A + ++ +++ ++H N+I + V + L + YI + L Q
Sbjct: 67 ------AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 195 PLPWGQRVNFA-RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+R+++ + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----- 175
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
A T+ M Y V Y+ APE++ G Y E VD++S G+++ E+
Sbjct: 176 -AGTSFM--------------MTPYVVTR--YYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 314 I 314
I
Sbjct: 219 I 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 S-----------------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 207 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRT-----------------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++ E+ G L L+ L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 209 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 130 FCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
KE GK G + +N ++AVL + H N++ + L L+ + ++GG L + +
Sbjct: 51 IAKEALEGKEG-SMEN--EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 190 QDPGQPLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL---VREDKTVVVADFGL 245
+ G R+ F + + YLH + ++HRDL +N L + ED ++++DFGL
Sbjct: 108 VEKGFYTERDASRLIF--QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+++ P +V++ T G P ++APE++ + Y + VD +S
Sbjct: 166 SKM-----EDPGSVLS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 306 YGIV 309
G++
Sbjct: 204 IGVI 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 SRRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 106
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 160
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 161 S-----------------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 204 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 132
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 186
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 187 SRRD-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 317 VP 318
P
Sbjct: 230 PP 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY G + + LQ +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FD 111
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 165
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 166 S-----------------RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF-EVLE 371
P + + + + + +F F E + NP QRP EVLE
Sbjct: 209 PPFEANTYQETYK-RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 130 FCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
KE GK G + +N ++AVL + H N++ + L L+ + ++GG L + +
Sbjct: 51 IAKEALEGKEG-SMEN--EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 190 QDPGQPLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL---VREDKTVVVADFGL 245
+ G R+ F + + YLH + ++HRDL +N L + ED ++++DFGL
Sbjct: 108 VEKGFYTERDASRLIF--QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+++ P +V++ T G P ++APE++ + Y + VD +S
Sbjct: 166 SKM-----EDPGSVLS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 306 YGIV 309
G++
Sbjct: 204 IGVI 207
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 47/216 (21%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 115
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPX 265
+ G+TYL + ++HRD+ N LV + + DFG++ ++I + MA
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE--------MAN--- 164
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP--- 321
VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 165 -------------EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAI 211
Query: 322 ----DYL-----PRSPD--FGLDQTDFRNKFCASCP 346
DY+ P+ P F L+ DF NK P
Sbjct: 212 FELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNP 247
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 186
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 187 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 232 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 189
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + +T+ G P +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGA------------------------TWTLCGTPEY 225
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 74 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 188
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 189 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 234 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++ E+ G L L+ L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 209 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 32/177 (18%)
Query: 153 RSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGM 212
RSL H N++RF V+ L +V EY +GG L E + + G+ + F + + +G+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGV 128
Query: 213 TYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
+Y H+M + HRDL +N L+ + + FG ++ ++H P+
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK-------------- 174
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-DVFSYGIVL-CEIIGRVP-ADPD 322
VG P ++APE++ +EYD V DV+S G+ L ++G P DP+
Sbjct: 175 ----------DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++ E+ G L L+ L
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 186 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 246 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 46/202 (22%)
Query: 155 LHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
+ H N+++FI + L L+T + G+L + L+ G + W + + A ++
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK--GNIITWNELCHVAETMSR 123
Query: 211 GMTYLH-----------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
G++YLH ++ HRD S+N L++ D T V+ADFGLA G T
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDT- 182
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-----QEYDETVDVFSYGIVLCEII 314
+ VG +MAPE++ G ++ +D+++ G+VL E++
Sbjct: 183 ------------------HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
Query: 315 GRV-----PADPDYLPRSPDFG 331
R P D LP + G
Sbjct: 225 SRCKAADGPVDEYMLPFEEEIG 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKVVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVNFA-RDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q +R+++ + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 151 DLKPSNIVVKSDATLKILDFGLART------AGTSFM--------------MTPYVVTR- 189
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ S+ + +V R +G+ + L+ + + G L + +++ + +N+ IA
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
GM YL L+HRDL ++N LV+ + V + DFG A+++ + KVP
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK---- 186
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDF 330
WMA E + + Y DV+SYG+ + E++ D +P S
Sbjct: 187 ---------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + R C I C ++ D RP F L
Sbjct: 232 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 129
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 130 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------- 178
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
T+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 179 -----------KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 25/186 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q +V + L H N++R G + ++ L+ EY GT+ LQ +
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FD 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + ++A ++Y HS +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VH----APS 163
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ + G ++ PEM+ G+ +DE VD++S G++ E ++G+
Sbjct: 164 SRRD-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 317 VPADPD 322
P + +
Sbjct: 207 PPFEAN 212
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++ E+ G L L+ L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I + P
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 209 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 125
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---------- 175
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
T+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 176 ------------TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T A V+G +++PE G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAA------------------VIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPD 329
D DV+S G VL E++ +P + SPD
Sbjct: 194 DSVDARSDVYSLGCVLYEVLT---GEPPFTGDSPD 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 125
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---------- 175
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
T+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 176 ------------TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVNFA-RDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q +R+++ + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 151 DLKPSNIVVKSDATLKILDFGLART------AGTSFM--------------MTPYVVTR- 189
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 35/175 (20%)
Query: 156 HHHNVIRFIGVLYK-DRKLNLVTEYIAGGTLKELLQDPGQP---------------LPWG 199
HH NV+ +G K L ++ E+ G L L+ L
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I + P
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
A++P WMAPE + + Y DV+S+G++L EI
Sbjct: 200 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 47/245 (19%)
Query: 77 VGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLD-NWYFEKDGLLFCKEDY 135
VGD F K IG G + I+C+A D +LD N +K F + +
Sbjct: 15 VGDSTF--TVLKRYQNLKPIGSGA------QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 66
Query: 136 NGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELL 189
A + ++ +++ ++H N+I + V + L LV E + L
Sbjct: 67 ------AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN----LC 116
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
Q L + + G+ +LHS +IHRDL N +V+ D T+ + DFGLAR
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART- 175
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
A T+ M V Y+ APE++ G Y E VD++S G +
Sbjct: 176 -----AGTSFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 310 LCEII 314
+ E++
Sbjct: 215 MGEMV 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 124 EKDG-LLFCKEDYNGKYGEACQN--CGQVAVLRSLHHHNVIRFIGVLY--KDRKLNLVTE 178
+ DG +L KE G EA + +V +LR L H N++R+ + + L +V E
Sbjct: 28 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 179 YIAGGTLKELLQDPGQPLPWGQ-----RVNFARDIAAGMTYLHS---MNLIHRDLNSQNC 230
Y GG L ++ + + RV +A + S ++HRDL N
Sbjct: 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 231 LVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE 290
+ + V + DFGLARI++ T AK T VG PY+M+PE
Sbjct: 148 FLDGKQNVKLGDFGLARILNHD-----TSFAK----------------TFVGTPYYMSPE 186
Query: 291 MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
M Y+E D++S G +L E+ +P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMP 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 23/150 (15%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
+L V EY+ GG L +Q G+ Q V +A +I+ G+ +LH +I+RDL N +
Sbjct: 94 RLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVM 152
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ + + +ADFG+ + +M V G P ++APE+
Sbjct: 153 LDSEGHIKIADFGMCK---------EHMMDGV------------TTREFCGTPDYIAPEI 191
Query: 292 MTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
+ Q Y ++VD ++YG++L E++ G+ P D
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 155
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ E + V DFG A+ + + + G P +
Sbjct: 156 PENLLIDEQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 191
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLAGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 130 FCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL 189
K+ GK G + +N ++AVL + H N++ + L L+ + ++GG L + +
Sbjct: 51 IAKKALEGKEG-SMEN--EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 190 QDPGQPLPW-GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL---VREDKTVVVADFGL 245
+ G R+ F + + YLH + ++HRDL +N L + ED ++++DFGL
Sbjct: 108 VEKGFYTERDASRLIF--QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+++ P +V++ T G P ++APE++ + Y + VD +S
Sbjct: 166 SKM-----EDPGSVLS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 306 YGIV 309
G++
Sbjct: 204 IGVI 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L H N++R VL+ D+KL LV E+ LK+ L +F
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ + HS N++HRDL QN L+ + + +ADFGLAR R + + +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL---- 165
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLCEI 313
++ P+++ G + Y ++D++S G + E+
Sbjct: 166 -----------------WYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L H N++ + V K ++ LV E++ L +L P L + +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQ 132
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I G+ + HS N+IHRD+ +N LV + V + DFG AR + AP V
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL----AAPGEVYD------ 182
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE++ G +Y + VDV++ G ++ E+ P P
Sbjct: 183 -----------DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLXGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
P WMAPE + + Y DV+S+G++L EI
Sbjct: 258 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 289
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVL-----YKDRKLNLVTEYIAGGTLKELLQDPGQPL 196
A + ++ +L+ H N+I +L Y + K V + L +++ QPL
Sbjct: 98 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPL 156
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
F + G+ Y+HS +IHRDL N LV E+ + + DFG+AR + P
Sbjct: 157 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 216
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
M + V ++ APE+M EY + +D++S G + E++
Sbjct: 217 QYFMTE-----------------YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
Query: 316 R 316
R
Sbjct: 260 R 260
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
P WMAPE + + Y DV+S+G++L EI
Sbjct: 263 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 294
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
P WMAPE + + Y DV+S+G++L EI
Sbjct: 256 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 287
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 189
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 225
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P A++
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
P WMAPE + + Y DV+S+G++L EI
Sbjct: 265 PLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 296
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ ++ L + ++R IGV + L LV E GG L + L + +P
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA-KVPXX 266
++ GM YL N +HR+L ++N L+ ++DFGL++ + T A K P
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
W APE + +++ DV+SYG+ + E +
Sbjct: 505 -------------------WYAPECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 25/146 (17%)
Query: 173 LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL +N L+
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLI 169
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+ + V DFG A+ + + + G P ++APE++
Sbjct: 170 DQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEYLAPEII 205
Query: 293 TGQEYDETVDVFSYGIVLCEIIGRVP 318
+ Y++ VD ++ G+++ E+ P
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
IA + +LHS L+HRDL N D V V DFGL + Q TV+ +P
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD-EEEQTVLTPMPAYA 185
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
VG +M+PE + G Y VD+FS G++L E++
Sbjct: 186 RHTGQ--------VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 75 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 128
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 129 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 224
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 225 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 139
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 188
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADPDYLP 325
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 189 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP---- 232
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNP---DQRPPFEVLEV 372
PD + F + E R LN D RPP + E+
Sbjct: 233 --PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL 280
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVL-----YKDRKLNLVTEYIAGGTLKELLQDPGQPL 196
A + ++ +L+ H N+I +L Y + K V + L +++ QPL
Sbjct: 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPL 155
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
F + G+ Y+HS +IHRDL N LV E+ + + DFG+AR + P
Sbjct: 156 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 215
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
M + V ++ APE+M EY + +D++S G + E++
Sbjct: 216 QYFMTE-----------------YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
Query: 316 R 316
R
Sbjct: 259 R 259
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
IA + +LHS L+HRDL N D V V DFGL + Q TV+ +P
Sbjct: 173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD-EEEQTVLTPMPAYA 231
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
VG +M+PE + G Y VD+FS G++L E++
Sbjct: 232 THXGQ--------VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+++V+ L H N+I+ + LV EY+ GG L + + D L + F +
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 207 DIAAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
I G+ ++H M ++H DL +N C+ R+ K + + DFGLAR PR V
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVN---- 248
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
G P ++APE++ D++S G++
Sbjct: 249 ----------------FGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T A V+G +++PE G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAA------------------VIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEII 314
D DV+S G VL E++
Sbjct: 194 DSVDARSDVYSLGCVLYEVL 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 134 DYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 193
D GK QN L+ H ++I+ V+ +V EY++GG L + + G
Sbjct: 53 DVVGKIKREIQN------LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+ R F + I + + Y H ++HRDL +N L+ +ADFGL+ ++ G
Sbjct: 107 RVEEMEARRLF-QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCE 312
T+ G+P + APE+++G+ Y VD++S G++L
Sbjct: 166 FLRTS----------------------CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 313 II-GRVPADPDYLP 325
++ G +P D +++P
Sbjct: 204 LLCGTLPFDDEHVP 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T A V+G +++PE G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAA------------------VIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEII 314
D DV+S G VL E++
Sbjct: 194 DSVDARSDVYSLGCVLYEVL 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T A V+G +++PE G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAA------------------VIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEII 314
D DV+S G VL E++
Sbjct: 194 DSVDARSDVYSLGCVLYEVL 213
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 75 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 128
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 129 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 224
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 225 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V R +G+ + LVT+ + G L + +++ L +N+ IA GM+YL +
Sbjct: 81 VSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
L+HRDL ++N LV+ V + DFGLAR++ KVP
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK------------- 186
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
WMA E + + + DV+SYG+ + E++
Sbjct: 187 ------WMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVNFA-RDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q +R+++ + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYVVTR- 189
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + +T+ G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWTLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---------- 173
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 174 ------------VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 154
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + +T+ G P +
Sbjct: 155 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWTLCGTPEY 190
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 110 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T A V+G +++PE G
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAA------------------VIGTAQYLSPEQARG 210
Query: 295 QEYDETVDVFSYGIVLCEII 314
D DV+S G VL E++
Sbjct: 211 DSVDARSDVYSLGCVLYEVL 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 147
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 148 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------- 196
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 197 -----------KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++++ RSL H +V+ F G + + +V E +L EL + L + + R
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQ 149
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
I G YLH +IHRDL N + ED V + DFGLA ++ + G R
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------- 198
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG-IVLCEIIGRVP 318
+ G P ++APE+++ + + VDV+S G I+ ++G+ P
Sbjct: 199 -----------KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 38 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 91
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 92 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 187
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 188 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 39 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 92
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 152
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M VP V
Sbjct: 153 DLKPSNIVVKSDCTLKILDFGLART------AGTSFMM-VP---------------FVVT 190
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 174
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 223
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 224 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 36 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 89
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 90 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 145
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 185
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 186 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 90
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 91 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 186
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 187 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
+ VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 193 --------SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 245 KIIKL-EYDFPEKF 257
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 38 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 91
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 92 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 187
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 188 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + VADFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 161
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 162 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 161
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 162 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 161
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 162 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 161
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 162 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 169 PENLIIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 90
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 91 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 186
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 187 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 30 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 83
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 84 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 139
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 179
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 180 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 124 EKDG-LLFCKEDYNGKYGEACQN--CGQVAVLRSLHHHNVIRFIGVLY--KDRKLNLVTE 178
+ DG +L KE G EA + +V +LR L H N++R+ + + L +V E
Sbjct: 28 KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 179 YIAGGTLKELLQDPGQPLPWGQ-----RVNFARDIAAGMTYLHS---MNLIHRDLNSQNC 230
Y GG L ++ + + RV +A + S ++HRDL N
Sbjct: 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 231 LVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE 290
+ + V + DFGLARI++ T AK VG PY+M+PE
Sbjct: 148 FLDGKQNVKLGDFGLARILNHD-----TSFAKA----------------FVGTPYYMSPE 186
Query: 291 MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
M Y+E D++S G +L E+ +P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMP 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N L+
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + A V+G +++PE G
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAA------------------VIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEII 314
D DV+S G VL E++
Sbjct: 194 DSVDARSDVYSLGCVLYEVL 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 31 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 84
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 85 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 180
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 181 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +LD N +K F + + A + ++ +++ ++H N+I +
Sbjct: 31 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLN 84
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L +++Q L + + G+ +LHS
Sbjct: 85 VFTPQKTLEEFQDVYLVME-LMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T+ M Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYV 180
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 181 VTR--YYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN--FA 205
++A+ + L H N+++++G ++ + + E + GG+L LL+ PL ++ +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVP 264
+ I G+ YLH ++HRD+ N L+ V+ ++DFG ++ + P T
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCT------ 180
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG--QEYDETVDVFSYGIVLCEI-IGRVPADP 321
T G +MAPE++ + Y + D++S G + E+ G+ P
Sbjct: 181 -------------ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
P++ F + + S C + +PD+R
Sbjct: 228 LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEY--------IAGGTLKELL 189
G + C ++A+LR L H NVI V + DRK+ L+ +Y I +
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN 119
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGL 245
+ P Q LP G + I G+ YLH+ ++HRDL N LV E V +AD G
Sbjct: 120 KKPVQ-LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 246 ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVF 304
AR+ + +P +A + VV ++ APE++ G + Y + +D++
Sbjct: 179 ARLFN----SPLKPLADLD--------------PVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 305 SYGIVLCEIIGRVP 318
+ G + E++ P
Sbjct: 221 AIGCIFAELLTSEP 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 54/249 (21%)
Query: 127 GLLFCKEDYNGKYGEACQN--CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGT 184
GL+ ++ + + A +N ++ VL + ++ F G Y D ++++ E++ GG+
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 90
Query: 185 LKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVAD 242
L ++L+ G+ P +V+ A + G+TYL + ++HRD+ N LV + + D
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 243 FGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVD 302
FG++ + MA + VG +M+PE + G Y D
Sbjct: 149 FGVSGQL-------IDSMAN----------------SFVGTRSYMSPERLQGTHYSVQSD 185
Query: 303 VFSYGIVLCEI-IGRVPADP-----------------DYL-----PRSPD--FGLDQTDF 337
++S G+ L E+ +GR P P DY+ P+ P F L+ DF
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 245
Query: 338 RNKFCASCP 346
NK P
Sbjct: 246 VNKCLIKNP 254
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L H N++R VL+ D+KL LV E+ LK+ L +F
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ G+ + HS N++HRDL QN L+ + + +A+FGLAR R + + +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL---- 165
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLCEI 313
++ P+++ G + Y ++D++S G + E+
Sbjct: 166 -----------------WYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 201
A + ++ +L+ H N+I + D N YI ++EL+Q + Q
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLHRVISTQM 108
Query: 202 VN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
++ F + LH N+IHRDL N L+ + + V DFGLARII +
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII 314
+ + V ++ APE M+T +Y +DV+S G +L E+
Sbjct: 169 NSEPTGQ-----------QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Query: 315 GRVPADP 321
R P P
Sbjct: 218 LRRPIFP 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 33/226 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV--NFA 205
++A+ + L H N+++++G ++ + + E + GG+L LL+ PL ++ +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVP 264
+ I G+ YLH ++HRD+ N L+ V+ ++DFG ++ + P T
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTE----- 167
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG--QEYDETVDVFSYGIVLCEIIGRVPADPD 322
T G +MAPE++ + Y + D++S G C II P
Sbjct: 168 --------------TFTGTLQYMAPEIIDKGPRGYGKAADIWSLG---CTIIEMATGKPP 210
Query: 323 YL----PRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
+ P++ F + + S C + +PD+R
Sbjct: 211 FYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 49/219 (22%)
Query: 152 LRSLHHHN---VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARD 207
L+ LH N ++ F G Y D ++++ E++ GG+L ++L+ G+ P +V+ A
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 131
Query: 208 IAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ G+TYL + ++HRD+ N LV + + DFG++ + MA
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN---- 180
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADP---- 321
+ VG +M+PE + G Y D++S G+ L E+ +GR P
Sbjct: 181 ------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
Query: 322 -------DYL-----PRSPD--FGLDQTDFRNKFCASCP 346
DY+ P+ P F L+ DF NK P
Sbjct: 229 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 267
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ +L V EY+ GG L +Q + LP ++ +I+ + YLH +I+RDL N
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 183
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
L+ + + + D+G+ + +G R T T G P ++AP
Sbjct: 184 VLLDSEGHIKLTDYGMCK---EGLRPGDTTS------------------TFCGTPNYIAP 222
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
E++ G++Y +VD ++ G+++ E++ GR P D
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 25/139 (17%)
Query: 178 EYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDK 236
E+ GTL++ ++ G+ L + I G+ Y+HS LIHRDL N + + K
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK 173
Query: 237 TVVVADFGL-ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ 295
V + DFGL + + G R + G +M+PE ++ Q
Sbjct: 174 QVKIGDFGLVTSLKNDGKRTRSK-----------------------GTLRYMSPEQISSQ 210
Query: 296 EYDETVDVFSYGIVLCEII 314
+Y + VD+++ G++L E++
Sbjct: 211 DYGKEVDLYALGLILAELL 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ ++ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
++AVL+ + H N++ + LV + ++GG L + + + G + +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQ 113
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ + + YLH ++HRDL +N L E+ +++ DFGL+++ G +M+
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG------IMS-- 165
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
T G P ++APE++ + Y + VD +S G++
Sbjct: 166 ---------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ +LR L H NVI+ + VLY + +K+ +V EY G + L P + P Q +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ G+ YLHS ++H+D+ N L+ T+ ++ G+A +H P A
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH--PFAADDTCR---- 169
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDE--TVDVFSYGIVLCEI 313
T G+P + PE+ G + VD++S G+ L I
Sbjct: 170 -------------TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + VADFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 201
A + ++ +L+ H N+I + D N YI ++EL+Q + Q
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLHRVISTQM 108
Query: 202 VN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP-- 253
++ F + LH N+IHRDL N L+ + + V DFGLARII +
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 254 -RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLC 311
PT + + V ++ APE M+T +Y +DV+S G +L
Sbjct: 169 NSEPTGQQSGMT--------------EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214
Query: 312 EIIGRVPADP 321
E+ R P P
Sbjct: 215 ELFLRRPIFP 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR 201
A + ++ +L+ H N+I + D N YI ++EL+Q + Q
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI----IQELMQTDLHRVISTQM 108
Query: 202 VN------FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP-- 253
++ F + LH N+IHRDL N L+ + + V DFGLARII +
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 254 -RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLC 311
PT + + V ++ APE M+T +Y +DV+S G +L
Sbjct: 169 NSEPTGQQSGMT--------------EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214
Query: 312 EIIGRVPADP 321
E+ R P P
Sbjct: 215 ELFLRRPIFP 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + VADFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 161
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 197
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--XQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GR 316
GR
Sbjct: 218 TGR 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYVVTR- 189
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 38 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 91
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYVVTR- 190
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 191 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
VG +++PE++T + ++ D+++ G ++ +++ +P
Sbjct: 193 --------XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYVVTR- 189
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 189
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
+ VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 190 --------SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 328 PDFGLDQTDFRNKF 341
L+ DF KF
Sbjct: 242 KIIKLE-YDFPEKF 254
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEA 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 193
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
+ VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 194 --------SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 246 KIIKL-EYDFPEKF 258
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M P V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFMM-TPE---------------VVT 188
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-DPGQPLPWGQRVNFAR 206
++ +L+ L H N++ + V + R+L+LV EY L EL + G P + + +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ- 110
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ + H N IHRD+ +N L+ + + + DFG AR++ GP
Sbjct: 111 -TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGP------------- 155
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ +PE++ G +Y VDV++ G V E++ VP P
Sbjct: 156 -------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 173 LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
L +V EY GG + L+ G+ R +A I YLHS++LI+RDL +N L+
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+ + VADFG A+ + + + G P ++APE++
Sbjct: 176 DQQGYIKVADFGFAKRV------------------------KGRTWXLCGTPEYLAPEII 211
Query: 293 TGQEYDETVDVFSYGIVLCEIIGRVP 318
+ Y++ VD ++ G+++ E+ P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q ++ + L H N++R + +++ L+ E+ G L + LQ G+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FD 112
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ F ++A + Y H +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VH----APS 166
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ G ++ PEM+ G+ +DE VD++ G++ E ++G
Sbjct: 167 L-----------------RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 317 VPAD 320
P D
Sbjct: 210 PPFD 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 131 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 189
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 225
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 161
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 197
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 179 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 220 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 31/194 (15%)
Query: 134 DYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG 193
D GK QN L+ H ++I+ V+ +V EY++GG L + + G
Sbjct: 53 DVVGKIKREIQN------LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
+ R F + I + + Y H ++HRDL +N L+ +ADFGL+ ++ G
Sbjct: 107 RVEEMEARRLF-QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 254 RAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCE 312
+ G+P + APE+++G+ Y VD++S G++L
Sbjct: 166 FLRDS----------------------CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 313 II-GRVPADPDYLP 325
++ G +P D +++P
Sbjct: 204 LLCGTLPFDDEHVP 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M + V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFMME----------------PEVVT 188
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 29/172 (16%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIA 209
+L ++H V++ + KL L+ +++ GG L L + + + V F ++A
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELA 140
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXX 267
G+ +LHS+ +I+RDL +N L+ E+ + + DFGL++ I H+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE---------------- 184
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
Y+ G +MAPE++ Q + + D +SYG+++ E++ G +P
Sbjct: 185 -------KKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+AGG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVK------------------------GRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+AP ++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY+ GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N L+ + + V DFG A+ + + + G P +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q ++ + L H N++R + +++ L+ E+ G L + LQ G+
Sbjct: 55 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FD 113
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ F ++A + Y H +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VH----APS 167
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ G ++ PEM+ G+ +DE VD++ G++ E ++G
Sbjct: 168 L-----------------RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 210
Query: 317 VPAD 320
P D
Sbjct: 211 PPFD 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ LV E GG L E++ R+ R
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI--IR 133
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H ++HRDL +N L+ +D + + DFGL+ +
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK----- 188
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ G YDE DV+S G++L ++ P
Sbjct: 189 -----------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCP 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q ++ + L H N++R + +++ L+ E+ G L + LQ G+
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FD 112
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ F ++A + Y H +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VH----APS 166
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGR 316
+ G ++ PEM+ G+ +DE VD++ G++ E ++G
Sbjct: 167 L-----------------RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 317 VPAD 320
P D
Sbjct: 210 PPFD 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 190
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 191 --------AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 243 KIIKL-EYDFPEKF 255
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 126
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 185 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 315 -GR 316
GR
Sbjct: 223 TGR 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 112
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 173 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 214 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 126
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 185 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 315 -GRV 317
GR
Sbjct: 223 TGRT 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 123
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEM 181
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 182 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 315 -GRV 317
GR
Sbjct: 220 TGRT 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 190
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 191 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 243 KIIKL-EYDFPEKF 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K E + +L++++ +++ + L +V EY GG + L+ G+
Sbjct: 81 KLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
R +A I YLHS++LI+RDL +N ++ + + V DFGLA+ +
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-------- 191
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
+ + G P ++APE++ + Y++ VD ++ G+++ E+
Sbjct: 192 ----------------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 318 P 318
P
Sbjct: 236 P 236
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 127
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEM 185
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 186 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 315 -GRV 317
GR
Sbjct: 224 TGRT 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 193 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 245 KIIKL-EYDFPEKF 257
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 190
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 191 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 243 KIIKL-EYDFPEKF 255
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 140
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 189
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 190 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 328 PDFGLDQTDFRNKF 341
L+ DF KF
Sbjct: 242 KIIKLE-YDFPEKF 254
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K E + +L++++ +++ + L +V EY GG + L+ G+
Sbjct: 81 KLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
R +A I YLHS++LI+RDL +N ++ + + V DFGLA+ +
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-------- 191
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
+ + G P ++APE++ + Y++ VD ++ G+++ E+
Sbjct: 192 ----------------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 318 P 318
P
Sbjct: 236 P 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ LV E GG L E++ R+ R
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI--IR 139
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H ++HRDL +N L+ +D + + DFGL+ +
Sbjct: 140 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK----- 194
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+G Y++APE++ G YDE DV+S G++L ++ P
Sbjct: 195 -----------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 193 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 245 KIIKL-EYDFPEKF 257
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 179 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 220 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ LV E GG L E++ R+ R
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI--IR 156
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H ++HRDL +N L+ +D + + DFGL+ +
Sbjct: 157 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK----- 211
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ G YDE DV+S G++L
Sbjct: 212 -----------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 141
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 190
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 191 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 243 KIIKL-EYDFPEKF 255
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 114
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 175 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 216 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 125
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 174
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 175 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 227 KIIKL-EYDFPEKF 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 124
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 185 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 226 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 193 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 245 KIIKL-EYDFPEKF 257
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 90
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M + V
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLART------AGTSFMME----------------PEVVT 188
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+++ LV E GG L E++ R+ R
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI--IR 157
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY+H ++HRDL +N L+ +D + + DFGL+ +
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK----- 212
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ G YDE DV+S G++L
Sbjct: 213 -----------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 144
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 193
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 194 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 246 KIIKL-EYDFPEKF 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 118
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 167
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 168 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 220 KIIKL-EYDFPEKF 232
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 42 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 95
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 155
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M Y V
Sbjct: 156 DLKPSNIVVKSDCTLKILDFGLART------AGTSFM--------------MTPYVVTR- 194
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 195 -YYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 119
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 168
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 169 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 328 PDFGLDQTDFRNKF 341
L+ DF KF
Sbjct: 221 KIIKLE-YDFPEKF 233
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 76 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 132
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM 190
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 191 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 315 -GRV 317
GR
Sbjct: 229 TGRT 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 132
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 193 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 234 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L+ N +K F + + A + ++ +++ ++H N+I +
Sbjct: 31 QGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLN 84
Query: 166 VLYKDRKLNLVTE-YIAGGTL-KELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHR 223
V + L + YI + L Q L + + G+ +LHS +IHR
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 224 DLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGN 283
DL N +V+ D T+ + DFGLAR A T+ M V
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLART------AGTSFMMT----------------PYVVT 182
Query: 284 PYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 134
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 195 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 236 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 134
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 195 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 236 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ +L V EY+ GG L +Q + LP ++ +I+ + YLH +I+RDL N
Sbjct: 93 ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 151
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
L+ + + + D+G+ + +G R T G P ++AP
Sbjct: 152 VLLDSEGHIKLTDYGMCK---EGLRPGDTTS------------------XFCGTPNYIAP 190
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
E++ G++Y +VD ++ G+++ E++ GR P D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 120
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 169
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 170 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 328 PDFGLDQTDFRNKF 341
L+ DF KF
Sbjct: 222 KIIKLE-YDFPEKF 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 25/149 (16%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
+L V EY+ GG L +Q G+ V +A +IA G+ +L S +I+RDL N +
Sbjct: 416 RLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474
Query: 232 VREDKTVVVADFGLAR-IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE 290
+ + + +ADFG+ + I G V K G P ++APE
Sbjct: 475 LDSEGHIKIADFGMCKENIWDG------VTTK----------------XFCGTPDYIAPE 512
Query: 291 MMTGQEYDETVDVFSYGIVLCEII-GRVP 318
++ Q Y ++VD +++G++L E++ G+ P
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ +L V EY+ GG L +Q + LP ++ +I+ + YLH +I+RDL N
Sbjct: 78 ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 136
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
L+ + + + D+G+ + +G R T G P ++AP
Sbjct: 137 VLLDSEGHIKLTDYGMCK---EGLRPGDTTS------------------XFCGTPNYIAP 175
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
E++ G++Y +VD ++ G+++ E++ GR P D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 121
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 170
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 171 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 328 PDFGLDQTDFRNKF 341
L+ DF KF
Sbjct: 223 KIIKLE-YDFPEKF 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 28/177 (15%)
Query: 148 QVAVLR-SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+V +LR S H NVIR+ KDR+ + + TL+E ++ + + +
Sbjct: 67 EVQLLRESDEHPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ 125
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKT-----VVVADFGLARIIHQGPRAPTTVMA 261
+G+ +LHS+N++HRDL N L+ +++DFGL + + G R + +
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG-RHSFSRRS 184
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT---GQEYDETVDVFSYGIVLCEIIG 315
VP G W+APEM++ + TVD+FS G V +I
Sbjct: 185 GVP-----------------GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 143
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 192
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
VG +++PE++T + ++ D+++ G ++ +++ +P
Sbjct: 193 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 146 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 194
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 195 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--XQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GR 316
GR
Sbjct: 218 TGR 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 224
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 225 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 138 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 186
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 187 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 182 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 230
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 231 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 131 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 179
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 180 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 136 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 184
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 185 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 178
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 179 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L N +K F + + A + ++ +L+ ++H N+I +
Sbjct: 35 QGIVCAAFDTVLGINVAVKKLSRPFQNQTH------AKRAYRELVLLKCVNHKNIISLLN 88
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L Q L + + G+ +LHS
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDAN----LCQVIHMELDHERMSYLLYQMLCGIKHLHSAG 144
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T M
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLART------ASTNFMMT----------------P 182
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 146
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 195
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
VG +++PE++T + ++ D+++ G ++ +++ +P
Sbjct: 196 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 137 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 185
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 186 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 180
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 181 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 128 LLFCKEDYNGKYGEACQN--CGQVAVLRSLHHHNVIRFIGVLY--KDRKLNLVTEYIAGG 183
+L KE G EA + +V +LR L H N++R+ + + L +V EY GG
Sbjct: 33 ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92
Query: 184 TLKELLQDPGQPLPWGQ-----RVNFARDIAAGMTYLHS---MNLIHRDLNSQNCLVRED 235
L ++ + + RV +A + S ++HRDL N +
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 236 KTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ 295
+ V + DFGLARI++ AK VG PY+M+PE M
Sbjct: 153 QNVKLGDFGLARILNHDED-----FAK----------------EFVGTPYYMSPEQMNRM 191
Query: 296 EYDETVDVFSYGIVLCEIIGRVP 318
Y+E D++S G +L E+ +P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMP 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 180
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 181 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII 314
V + ++ APE M+ Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GR 316
GR
Sbjct: 218 TGR 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
V+ L H ++ D KL Y G L + ++ G R + +I +
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 148
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXX 270
+ YLH +IHRDL +N L+ ED + + DFG A+++ +P + A+
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPESKQARAN------ 197
Query: 271 XXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP---ADPDYLPRS 327
VG +++PE++T + ++ D+++ G ++ +++ +P A +YL
Sbjct: 198 --------XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 328 PDFGLDQTDFRNKF 341
L + DF KF
Sbjct: 250 KIIKL-EYDFPEKF 262
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
K G Q ++ + LHH N++R Y R++ L+ EY G L + LQ
Sbjct: 63 KEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-FD 121
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ ++A + Y H +IHRD+ +N L+ + +ADFG + +H AP+
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS--VH----APS 175
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
T+ G ++ PEM+ G+ ++E VD++ G++ E++
Sbjct: 176 L-----------------RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGN 218
Query: 318 PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
P + + D KF AS P + NP +R P
Sbjct: 219 PPFESASHNETYRRIVKVDL--KFPASVPTGAQDLISKLLRHNPSERLPL 266
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--SQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGL R H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ +L V EY+ GG L +Q + LP ++ +I+ + YLH +I+RDL N
Sbjct: 82 ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 140
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
L+ + + + D+G+ + +G R T G P ++AP
Sbjct: 141 VLLDSEGHIKLTDYGMCK---EGLRPGDTTS------------------XFCGTPNYIAP 179
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
E++ G++Y +VD ++ G+++ E++ GR P D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V R H NV+ F+G L ++T G TL +++D L + A++
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI 248
I GM YLH+ ++H+DL S+N K VV+ DFGL I
Sbjct: 139 IVKGMGYLHAKGILHKDLKSKNVFYDNGK-VVITDFGLFSI 178
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPC----------- 178
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
YT PY++APE++ ++YD++ D++S G+++
Sbjct: 179 ---------YT----PYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
+L V EY+ GG L +Q G+ V +A +IA G+ +L S +I+RDL N +
Sbjct: 95 RLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 153
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ + + +ADFG+ + V K G P ++APE+
Sbjct: 154 LDSEGHIKIADFGMCK-----ENIWDGVTTK----------------XFCGTPDYIAPEI 192
Query: 292 MTGQEYDETVDVFSYGIVLCEII-GRVP 318
+ Q Y ++VD +++G++L E++ G+ P
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 128
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM 186
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 187 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 315 -GR 316
GR
Sbjct: 225 TGR 227
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 477
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 538 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 579 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 128
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM 186
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 187 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 315 -GRV 317
GR
Sbjct: 225 TGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 128
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEM 186
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 187 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 315 -GR 316
GR
Sbjct: 225 TGR 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 127 GLLFCKEDYNGKYGEACQN--CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGT 184
GL+ ++ + + A +N ++ VL + ++ F G Y D ++++ E++ GG+
Sbjct: 41 GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 100
Query: 185 LKELLQDPGQ-PLPWGQRVNFARDIAAGMTYLHSMN-LIHRDLNSQNCLVREDKTVVVAD 242
L ++L++ + P +V+ A + G+ YL + ++HRD+ N LV + + D
Sbjct: 101 LDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCD 158
Query: 243 FGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVD 302
FG++ + MA + VG +MAPE + G Y D
Sbjct: 159 FGVSGQL-------IDSMAN----------------SFVGTRSYMAPERLQGTHYSVQSD 195
Query: 303 VFSYGIVLCEI-IGRVPADP 321
++S G+ L E+ +GR P P
Sbjct: 196 IWSMGLSLVELAVGRYPIPP 215
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ L++L H ++ + VL K+ +V EY GG L + + + RV F R
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF-RQ 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
I + + Y+HS HRDL +N L E + + DFGL P+ +
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLC----AKPKGNKDYHLQ----- 167
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII-GRVPADPD 322
T G+ + APE++ G+ Y DV+S GI+L ++ G +P D D
Sbjct: 168 -----------TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ V++ L + ++R IG+ + + LV E G L + LQ + + +
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVH 476
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR-APTTVMAKVPX 265
++ GM YL N +HRDL ++N L+ ++DFGL++ + K P
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLP 325
W APE + ++ DV+S+G+++ E +
Sbjct: 537 K-------------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
S + + R A CP + LC + + RP F +E+ L
Sbjct: 578 GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 120
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 179 MTGXVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 314 I-GR 316
+ GR
Sbjct: 217 LTGR 220
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV--NFA 205
+V++L+ L H N+I V++ + +L+L+ EY K + ++P + RV +F
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSM----RVIKSFL 138
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLV-----REDKTVVVADFGLARIIHQGPRAPTTVM 260
+ G+ + HS +HRDL QN L+ E + + DFGLAR R T +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPA 319
+ ++ PE++ G + Y +VD++S + E++ + P
Sbjct: 199 ITL---------------------WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237
Query: 320 DP 321
P
Sbjct: 238 FP 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRVNFAR 206
+V +L+ L H N+ + LV E GG L E++ R+ R
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI--IR 133
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ +G+TY H ++HRDL +N L+ +D + + DFGL+ +
Sbjct: 134 QVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK----- 188
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+G Y++APE++ G YDE DV+S G++L
Sbjct: 189 -----------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++A+ +SL + +V+ F G D + +V E +L EL + + + F R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQ 150
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
G+ YLH+ +IHRDL N + +D V + DFGLA +I G R
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK----------- 199
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
T+ G P ++APE++ + + VD++S G +L ++G+ P
Sbjct: 200 -----------KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXX 268
YLHS+N+ HRD+ +N L R + + + DFG A+ H P
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----------- 224
Query: 269 XXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
YT PY++APE++ ++YD++ D +S G++
Sbjct: 225 ---------YT----PYYVAPEVLGPEKYDKSCDXWSLGVI 252
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GR 316
GR
Sbjct: 218 TGR 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 126
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 185 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
Query: 315 -GRV 317
GR
Sbjct: 223 TGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 64 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 120
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 178
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 179 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
Query: 315 -GRV 317
GR
Sbjct: 217 TGRT 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 72 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 128
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 186
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 187 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
Query: 315 -GRV 317
GR
Sbjct: 225 TGRT 228
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 140
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 199 MXGXVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 314 I-GRV 317
+ GR
Sbjct: 237 LTGRT 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 123
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 181
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 182 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 315 -GRV 317
GR
Sbjct: 220 TGRT 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 123
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 181
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 182 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 315 -GRV 317
GR
Sbjct: 220 TGRT 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 76 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 132
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 190
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 191 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 315 -GRV 317
GR
Sbjct: 229 TGRT 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 55/250 (22%)
Query: 95 CIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRS 154
IG+G S+ +V ++ LC + +++ + G+A +N ++ ++R
Sbjct: 27 VIGNG-SFGVVYQAKLCDSGELVAIKKVLQ---------------GKAFKN-RELQIMRK 69
Query: 155 LHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWGQRVNFAR 206
L H N++R Y + LNLV +Y+ + Q LP +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPX 265
+ + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G + + ++
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
Y+ APE++ G +Y ++DV+S G VL E++ P P
Sbjct: 187 -------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG-- 225
Query: 325 PRSPDFGLDQ 334
D G+DQ
Sbjct: 226 ----DSGVDQ 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 133
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 191
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 192 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 315 -GRV 317
GR
Sbjct: 230 TGRT 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 120
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 179 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 314 I-GR 316
+ GR
Sbjct: 217 LTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 125
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 183
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 184 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 314 I-GR 316
+ GR
Sbjct: 222 LTGR 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 AGFVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 67 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 123
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 181
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 182 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 315 -GRV 317
GR
Sbjct: 220 TGRT 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 116
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 175 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 314 I-GR 316
+ GR
Sbjct: 213 LTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 117
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 176 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 314 I-GR 316
+ GR
Sbjct: 214 LTGR 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 29/188 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L H N+I + ++LV +++ L+ +++D L +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
G+ YLH ++HRDL N L+ E+ + +ADFGLA+ RA
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA------------ 168
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
+ VV ++ APE++ G Y VD+++ G +L E++ RVP +LP
Sbjct: 169 --------YXHQVVTR-WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP----FLPG 215
Query: 327 SPDFGLDQ 334
D LDQ
Sbjct: 216 DSD--LDQ 221
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 133
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 191
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 192 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 315 -GRV 317
GR
Sbjct: 230 TGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 77 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 133
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 191
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 192 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 315 -GRV 317
GR
Sbjct: 230 TGRT 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 AGFVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 117
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 176 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 314 I-GR 316
+ GR
Sbjct: 214 LTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 127
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 185
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 186 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 315 -GRV 317
GR
Sbjct: 224 TGRT 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 75 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 131
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 189
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 190 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 315 -GRV 317
GR
Sbjct: 228 TGRT 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 169
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV------------------------KGRTWXLCGTPEY 205
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 88 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 144
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 202
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 203 XGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 315 -GRV 317
GR
Sbjct: 241 TGRT 244
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 62 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 118
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 176
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 177 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 314 I-GR 316
+ GR
Sbjct: 215 LTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 139
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 197
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 198 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 314 I-GRV 317
+ GR
Sbjct: 236 LTGRT 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 116
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 175 MAGFVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 314 I-GR 316
+ GR
Sbjct: 213 LTGR 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 41/185 (22%)
Query: 148 QVAVLRSLHHHNVIRFIG----------------VLYKDRKLNLVTEYIAGGTLKELLQD 191
+V L L H N++ + G K + L + E+ GTL++ ++
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 192 P-GQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL-ARII 249
G+ L + I G+ Y+HS LI+RDL N + + K V + DFGL +
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 250 HQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G R + G +M+PE ++ Q+Y + VD+++ G++
Sbjct: 174 NDGKRXRSK-----------------------GTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 310 LCEII 314
L E++
Sbjct: 211 LAELL 215
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + HHNVI V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 116
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 175 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 314 I-GR 316
+ GR
Sbjct: 213 LTGR 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 168 YKDR-KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+KD L +V EY GG + L+ G+ R +A I YLHS++LI+RDL
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYRDLK 168
Query: 227 SQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
+N ++ + + V DFG A+ + + + G P +
Sbjct: 169 PENLMIDQQGYIQVTDFGFAKRV------------------------KGRTWXLCGTPEY 204
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+APE++ + Y++ VD ++ G+++ E+ P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 140
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 199 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 314 I-GRV 317
+ GR
Sbjct: 237 LTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 88 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 144
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 202
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 203 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 315 -GRV 317
GR
Sbjct: 241 TGRT 244
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 140
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 199 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 314 I-GRV 317
+ GR
Sbjct: 237 LTGRT 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 139
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 197
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 198 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 314 I-GRV 317
+ GR
Sbjct: 236 LTGRT 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLH 216
H N+++ V + LV E + GG L E ++ + + R + + ++++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMH 123
Query: 217 SMNLIHRDLNSQNCLVREDK---TVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXX 273
+ ++HRDL +N L ++ + + DFG AR+ + P K P
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-----KPPDNQPLKTPC-------- 170
Query: 274 XXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
+T+ ++ APE++ YDE+ D++S G++L ++ G+VP
Sbjct: 171 ----FTL----HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 48/189 (25%)
Query: 155 LHHHNVIRFI---GVLYKDRKLN--LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+ H N+ RFI + D ++ LV EY G+L + L W A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS--LHTSDWVSSCRLAHSVT 121
Query: 210 AGMTYLHSM---------NLIHRDLNSQNCLVREDKTVVVADFGLA------RIIHQGPR 254
G+ YLH+ + HRDLNS+N LV+ D T V++DFGL+ R++ G
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-------QEYDETVDVFSYG 307
+ + VG +MAPE++ G + + VD+++ G
Sbjct: 182 DNAAI-------------------SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
Query: 308 IVLCEIIGR 316
++ EI R
Sbjct: 223 LIYWEIFMR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 126
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 185 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 314 I-GRV 317
+ GR
Sbjct: 223 LTGRT 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQ 194
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQ 126
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 255 APTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEI 313
V + ++ APE+M Y++TVD++S G ++ E+
Sbjct: 185 MTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 314 I-GRV 317
+ GR
Sbjct: 223 LTGRT 227
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 174
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 175 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGTLKELLQDPGQPL 196
CQ ++ +L H N+I ++ + + + LVT ++ G L +LL+ Q L
Sbjct: 85 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLK--TQHL 141
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHD 199
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIG 315
T V ++ APE M+ + Y +++D++S G +L E++
Sbjct: 200 HTGFLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 316 RVPADP 321
P P
Sbjct: 244 NRPIFP 249
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYI----AGGTLKELLQDPGQPLPWGQRVN 203
++ +L L +IR ++ D L YI A LK+L + P L
Sbjct: 75 EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF-LTEEHIKT 133
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
++ G ++H +IHRDL NCL+ +D +V V DFGLAR I+ T ++ +
Sbjct: 134 ILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS--EKDTNIVNDL 191
Query: 264 -----PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLCEIIG 315
P + V ++ APE++ QE Y +++D++S G + E++
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTR--WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 121
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 174
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 175 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 51 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 108
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 109 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 165
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
T G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 166 K------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 124 EKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVT 177
E+ + C+++ + K E C ++ +++ L+H NV+ V +KL L
Sbjct: 40 EQVAIKQCRQELSPKNRERW--CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97
Query: 178 EYIAGGTLKELLQDPGQ--PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRED 235
EY GG L++ L L G DI++ + YLH +IHRDL +N +++
Sbjct: 98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157
Query: 236 KTVV---VADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+ + D G A+ + QG VG ++APE++
Sbjct: 158 PQRLIHKIIDLGYAKELDQG----------------------ELCTEFVGTLQYLAPELL 195
Query: 293 TGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLP 325
++Y TVD +S+G + E I G P P++ P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 124 EKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVT 177
E+ + C+++ + K E C ++ +++ L+H NV+ V +KL L
Sbjct: 41 EQVAIKQCRQELSPKNRERW--CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 98
Query: 178 EYIAGGTLKELLQDPGQ--PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRED 235
EY GG L++ L L G DI++ + YLH +IHRDL +N +++
Sbjct: 99 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 158
Query: 236 KTVV---VADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+ + D G A+ + QG VG ++APE++
Sbjct: 159 PQRLIHKIIDLGYAKELDQG----------------------ELCTEFVGTLQYLAPELL 196
Query: 293 TGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLP 325
++Y TVD +S+G + E I G P P++ P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 105
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 162
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
T G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 163 K------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++L+ + H NVI V + L+ E +AGG L + L + + L + F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQ 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS+ + H DL +N ++ + + + DFGLA I G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK------- 175
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 176 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 105
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 162
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
T G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 163 K------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + D+GLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 53/219 (24%)
Query: 110 LCSACD------VMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRF 163
+CSA D V + Y LF K Y ++ +L+ + H NVI
Sbjct: 41 VCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-----------ELRLLKHMRHENVIGL 89
Query: 164 IGVLYKDRKLNLVTEY-----IAGGTLKELLQDPGQPLPWGQ-RVNF-ARDIAAGMTYLH 216
+ V D L+ T++ G L +L++ G+ R+ F + G+ Y+H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIH 145
Query: 217 SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXX 276
+ +IHRDL N V ED + + DFGLAR +A + + V
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLAR------QADSEMXGXVVTR---------- 189
Query: 277 XYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII 314
++ APE ++ Y +TVD++S G ++ E+I
Sbjct: 190 --------WYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQDPGQPL 196
A + ++ +L+ L H NVI + V + +E + G L +++ Q L
Sbjct: 71 ARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--SQAL 128
Query: 197 PWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ V F + G+ Y+HS +IHRDL N V ED + + DFGLAR Q
Sbjct: 129 S-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEE 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
T +A ++ APE+M Y++TVD++S G ++ E++
Sbjct: 185 MTGYVA---------------------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 55/250 (22%)
Query: 95 CIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRS 154
IG+G S+ +V ++ LC + + L+ K+ GK A +N ++ ++R
Sbjct: 27 VIGNG-SFGVVYQAKLCDSGE------------LVAIKKVLQGK---AFKN-RELQIMRK 69
Query: 155 LHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWGQRVNFAR 206
L H N++R Y + LNLV +Y+ + Q LP +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPX 265
+ + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G + + ++
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 186
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
Y+ APE++ G +Y ++DV+S G VL E++ P P
Sbjct: 187 -------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG-- 225
Query: 325 PRSPDFGLDQ 334
D G+DQ
Sbjct: 226 ----DSGVDQ 231
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 27/144 (18%)
Query: 171 RKLNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
R L ++ E + GG L +Q+ G Q + RDI + +LHS N+ HRD+ +N
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 230 CLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
L +D + + DFG A+ Q T PY+
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQN-----------------------ALQTPCYTPYY 176
Query: 287 MAPEMMTGQEYDETVDVFSYGIVL 310
+APE++ ++YD++ D++S G+++
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 27/144 (18%)
Query: 171 RKLNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
R L ++ E + GG L +Q+ G Q + RDI + +LHS N+ HRD+ +N
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 230 CLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
L +D + + DFG A+ Q T PY+
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQN-----------------------ALQTPCYTPYY 195
Query: 287 MAPEMMTGQEYDETVDVFSYGIVL 310
+APE++ ++YD++ D++S G+++
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 55/250 (22%)
Query: 95 CIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRS 154
IG+G S+ +V ++ LC + +++ + G+A +N ++ ++R
Sbjct: 27 VIGNG-SFGVVYQAKLCDSGELVAIKKVLQ---------------GKAFKN-RELQIMRK 69
Query: 155 LHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWGQRVNFAR 206
L H N++R Y + LNLV +Y+ + Q LP +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPX 265
+ + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G + + ++
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 186
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPADPDYL 324
Y+ APE++ G +Y ++DV+S G VL E++ P P
Sbjct: 187 -------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG-- 225
Query: 325 PRSPDFGLDQ 334
D G+DQ
Sbjct: 226 ----DSGVDQ 231
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++A+ +SL + +V+ F G D + +V E +L EL + + + F R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQ 134
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
G+ YLH+ +IHRDL N + +D V + DFGLA +I G R
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---------- 184
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+ G P ++APE++ + + VD++S G +L ++G+ P
Sbjct: 185 ------------DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++A+ +SL + +V+ F G D + +V E +L EL + + + F R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQ 150
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
G+ YLH+ +IHRDL N + +D V + DFGLA +I G R
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK----------- 199
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+ G P ++APE++ + + VD++S G +L ++G+ P
Sbjct: 200 -----------KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++A+ +SL + +V+ F G D + +V E +L EL + + + + F R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR-RKAVTEPEARYFMRQ 150
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPXX 266
G+ YLH+ +IHRDL N + +D V + DFGLA +I G R
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK----------- 199
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+ G P ++APE++ + + VD++S G +L ++G+ P
Sbjct: 200 -----------KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 33/242 (13%)
Query: 78 GDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNG 137
G K PECF+ G G+ + + R + + + +K ++ +D
Sbjct: 10 GPEKIRPECFELLRVLGKGGYGKVFQV--RKVTGANTGKIFAMKVLKKAMIVRNAKD--- 64
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
+ +L + H ++ I KL L+ EY++GG L L+ G +
Sbjct: 65 ----TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR-IIHQGPRAP 256
+ +I+ + +LH +I+RDL +N ++ V + DFGL + IH G
Sbjct: 121 -DTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---- 175
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
+T G +MAPE++ ++ VD +S G ++ +++
Sbjct: 176 ------------------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 317 VP 318
P
Sbjct: 218 AP 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 47/190 (24%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQ---- 190
A + ++ +L+ + H NVI + V R L LVT ++ G L +++
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCAKL 118
Query: 191 --DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI 248
D Q L + I G+ Y+HS ++IHRDL N V ED + + DFGLAR
Sbjct: 119 TDDHVQFLIY--------QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYG 307
H V + ++ APE+M Y++TVD++S G
Sbjct: 170 -HTDDEMTGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 308 IVLCEII-GR 316
++ E++ GR
Sbjct: 207 CIMAELLTGR 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 141 EACQNCGQVAVLRSLH-HHNVIRFIGVLY--KDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
+A + ++ +L L H N++ + VL DR + LV +Y+ + + +P+
Sbjct: 51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPV- 109
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPT 257
+ + + YLHS L+HRD+ N L+ + V VADFGL+R R
Sbjct: 110 --HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGR 316
+ + V ++ APE++ G +Y + +D++S G +L EI+
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 317 VPADP 321
P P
Sbjct: 228 KPIFP 232
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 29/171 (16%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V++ DR L +V EY+ GG L L+ + P W + + ++ + +HSM
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLALDAIHSMG 193
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXY 278
IHRD+ N L+ + + +ADFG ++ +G M +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-------MVRCD-------------- 232
Query: 279 TVVGNPYWMAPEMMTGQ----EYDETVDVFSYGIVLCE-IIGRVPADPDYL 324
T VG P +++PE++ Q Y D +S G+ L E ++G P D L
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 29/171 (16%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V++ DR L +V EY+ GG L L+ + P W + + ++ + +HSM
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLALDAIHSMG 188
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXY 278
IHRD+ N L+ + + +ADFG ++ +G M +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-------MVRCD-------------- 227
Query: 279 TVVGNPYWMAPEMMTGQ----EYDETVDVFSYGIVLCE-IIGRVPADPDYL 324
T VG P +++PE++ Q Y D +S G+ L E ++G P D L
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 29/171 (16%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V++ DR L +V EY+ GG L L+ + P W + + ++ + +HSM
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLALDAIHSMG 193
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGL-ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXY 278
IHRD+ N L+ + + +ADFG ++ +G M +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-------MVRCD-------------- 232
Query: 279 TVVGNPYWMAPEMMTGQ----EYDETVDVFSYGIVLCE-IIGRVPADPDYL 324
T VG P +++PE++ Q Y D +S G+ L E ++G P D L
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQRVN 203
++ VL+SL H N+I+ V + +V E GG L E + Q G+ L G
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVRE---DKTVVVADFGLARIIHQGPRAPTTVM 260
+ + + Y HS +++H+DL +N L ++ + + DFGLA + +
Sbjct: 129 LMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA-- 186
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
G +MAPE+ ++ D++S G+V+
Sbjct: 187 --------------------AGTALYMAPEVFK-RDVTFKCDIWSAGVVM 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 53 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 110
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 111 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 167
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 168 KX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 105
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 162
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 163 KX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H NVI +L + YI ++ L Q L
Sbjct: 85 CQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND 144
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLARI P T
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDHTG 202
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 203 FLT----------------EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 319 ADP 321
P
Sbjct: 247 IFP 249
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 105
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 162
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 163 KX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 183 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 221 PIFPG------DSGVDQ 231
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 107 RSILCSACDVMLD-NWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHHNVIRFIG 165
+ I+C+A D +L N +K F + + A + ++ +L+ ++H N+I +
Sbjct: 37 QGIVCAAFDTVLGINVAVKKLSRPFQNQTH------AKRAYRELVLLKCVNHKNIISLLN 90
Query: 166 VLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V + L LV E + L Q L + + G+ +LHS
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDAN----LCQVIHMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
+IHRDL N +V+ D T+ + DFGLAR A T M
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART------ACTNFMMT----------------P 184
Query: 280 VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
V Y+ APE++ G Y VD++S G ++ E++
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 183
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 184 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 222 PIFPG------DSGVDQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 195 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 233 PIFPG------DSGVDQ 243
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + + +
Sbjct: 48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEE 105
Query: 201 RVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R F +I + + YLHS ++++RD+ +N ++ +D + + DFGL + +G T+
Sbjct: 106 RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATM 162
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
G P ++APE++ +Y VD + G+V+ E++ GR+P
Sbjct: 163 KX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + FGLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 183 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 221 PIFPG------DSGVDQ 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 186
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 187 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 225 PIFPG------DSGVDQ 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQDPGQPL 196
A + ++ +L+ L H NVI + V + +E + G L +++ Q L
Sbjct: 71 ARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQAL 128
Query: 197 PWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ V F + G+ Y+HS +IHRDL N V ED + + DFGLAR Q
Sbjct: 129 S-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEE 184
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
T +A ++ APE+M Y++TVD++S G ++ E++
Sbjct: 185 MTGYVA---------------------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 183 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 221 PIFPG------DSGVDQ 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V++ D+ L +V EY+ GG L L+ + P W + + ++ + +HSM
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF--YTAEVVLALDAIHSMG 194
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYT 279
LIHRD+ N L+ + + +ADFG + + T M T
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE------TGMVHCD--------------T 234
Query: 280 VVGNPYWMAPEMMTGQE----YDETVDVFSYGIVLCE-IIGRVPADPDYL 324
VG P +++PE++ Q Y D +S G+ L E ++G P D L
Sbjct: 235 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL 284
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 216
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 217 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 255 PIFPG------DSGVDQ 265
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRK----LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y ++K LNLV +Y+ + Q LP
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 190
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 191 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 229 PIFPG------DSGVDQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 195 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 233 PIFPG------DSGVDQ 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS + H DL +N ++ + + + DFG+A I G
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------- 176
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 177 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRK----LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y ++K LNLV +Y+ + Q LP
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 201
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 202 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 240 PIFPG------DSGVDQ 250
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 210
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 211 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 249 PIFPG------DSGVDQ 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 29/172 (16%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIA 209
+L ++H +++ + KL L+ +++ GG L L + + + V F ++A
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELA 136
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXX 267
+ +LHS+ +I+RDL +N L+ E+ + + DFGL++ I H+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------- 180
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
Y+ G +MAPE++ + + ++ D +S+G+++ E++ G +P
Sbjct: 181 -------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DF LAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 195
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 196 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 234 PIFPG------DSGVDQ 244
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 183 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 221 PIFPG------DSGVDQ 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + D GLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 137
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS + H DL +N ++ + + + DFG+A I G
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------- 190
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 191 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 216
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 217 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 255 PIFPG------DSGVDQ 265
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 220
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 221 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 259 PIFPG------DSGVDQ 269
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 218
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 219 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 257 PIFPG------DSGVDQ 267
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + D GLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V +LR + H N+I + + L+ E ++GG L + L + + L + F +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQ 116
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLHS + H DL +N ++ + + + DFG+A I G
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------- 169
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 170 ---------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V L LVT ++ G L +++ Q
Sbjct: 94 AKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVK--CQK 150
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + DFGLAR H
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 208
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y+ TVD++S G ++ E++
Sbjct: 209 TGYVATR----------------------WYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
Query: 315 -GRV 317
GR
Sbjct: 247 TGRT 250
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 261
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 262 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 300 PIFPG------DSGVDQ 310
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRK------LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R L H N++R Y + LNLV +Y+ + Q LP
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G +
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 187
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G +Y ++DV+S G VL E++
Sbjct: 188 ICSR----------------------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
Query: 318 PADPDYLPRSPDFGLDQ 334
P P D G+DQ
Sbjct: 226 PIFPG------DSGVDQ 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP 195
A + ++ +L+ + H NVI + V R L LVT ++ G L +++ Q
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK--CQK 121
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L I G+ Y+HS ++IHRDL N V ED + + D GLAR H
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEM 179
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
V + ++ APE+M Y++TVD++S G ++ E++
Sbjct: 180 TGYVATR----------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 315 -GRV 317
GR
Sbjct: 218 TGRT 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L + H N+I ++ + YI ++ L Q L
Sbjct: 67 CQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 126
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV--ADPDHDHTG 184
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 185 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 319 ADP 321
P
Sbjct: 229 IFP 231
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 44/186 (23%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 210
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 211 GMTYLHSMNLIHRDLNSQNCLVR-------------EDKTVVVADFGLARIIHQGPRAPT 257
G+ +LHS+ +IHRDL QN LV E+ ++++DFGL + + G +
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM-------TGQEYDETVDVFSYGIVL 310
T + G W APE++ T + ++D+FS G V
Sbjct: 187 TNLNNPS-----------------GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 311 CEIIGR 316
I+ +
Sbjct: 230 YYILSK 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 29/172 (16%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIA 209
+L ++H +++ + KL L+ +++ GG L L + + + V F ++A
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELA 136
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXX 267
+ +LHS+ +I+RDL +N L+ E+ + + DFGL++ I H+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------- 180
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
Y+ G +MAPE++ + + ++ D +S+G+++ E++ G +P
Sbjct: 181 -------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 29/172 (16%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIA 209
+L ++H +++ + KL L+ +++ GG L L + + + V F ++A
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELA 137
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXX 267
+ +LHS+ +I+RDL +N L+ E+ + + DFGL++ I H+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------- 181
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
Y+ G +MAPE++ + + ++ D +S+G+++ E++ G +P
Sbjct: 182 -------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Query: 141 EACQN------CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL----Q 190
EAC N G++ V + +H N++ + D +L +VT ++A G+ K+L+
Sbjct: 63 EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM 122
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADF--GLARI 248
D L + + + Y+H M +HR + + + L+ D V ++ L+ I
Sbjct: 123 DGMNELAIAY---ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG--QEYDETVDVFSY 306
H G R V+ P Y+V P W++PE++ Q YD D++S
Sbjct: 180 SH-GQRQ--RVVHDFP------------KYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSV 223
Query: 307 GIVLCEII-GRVP 318
GI CE+ G VP
Sbjct: 224 GITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Query: 141 EACQN------CGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL----Q 190
EAC N G++ V + +H N++ + D +L +VT ++A G+ K+L+
Sbjct: 47 EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM 106
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADF--GLARI 248
D L + + + Y+H M +HR + + + L+ D V ++ L+ I
Sbjct: 107 DGMNELAIAY---ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 163
Query: 249 IHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG--QEYDETVDVFSY 306
H G R V+ P Y+V P W++PE++ Q YD D++S
Sbjct: 164 SH-GQRQ--RVVHDFP------------KYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSV 207
Query: 307 GIVLCEII-GRVP 318
GI CE+ G VP
Sbjct: 208 GITACELANGHVP 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 148 QVAVLRSLHHHNVIRFIGV-----LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 202
++ +L L +IR + L K +L +V E IA LK+L + P L
Sbjct: 77 EITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIF-LTEQHVK 134
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARI------IHQGPRAP 256
++ G ++H +IHRDL NCL+ +D +V + DFGLAR IH
Sbjct: 135 TILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQE-YDETVDVFSYGIVLCEIIG 315
+ P + V ++ APE++ QE Y ++D++S G + E++
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTR--WYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 316 RVPA 319
+ +
Sbjct: 253 MMKS 256
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV--ADPDHDHTGFLT- 185
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 186 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 78 GDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNG 137
G K PECF+ G G+ + + R + + + +K ++ +D
Sbjct: 10 GPEKIRPECFELLRVLGKGGYGKVFQV--RKVTGANTGKIFAMKVLKKAMIVRNAKD--- 64
Query: 138 KYGEACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLP 197
+ +L + H ++ I KL L+ EY++GG L L+ G +
Sbjct: 65 ----TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 198 WGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR-IIHQGPRAP 256
+ +I+ + +LH +I+RDL +N ++ V + DFGL + IH G
Sbjct: 121 -DTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---- 175
Query: 257 TTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGR 316
+ G +MAPE++ ++ VD +S G ++ +++
Sbjct: 176 ------------------TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 317 VP 318
P
Sbjct: 218 AP 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHS-MNLIHRDLNSQN 229
+L V EY GG L + + R F +I + + YLHS N+++RDL +N
Sbjct: 225 RLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 282
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
++ +D + + DFGL + +G + T+ T G P ++AP
Sbjct: 283 LMLDKDGHIKITDFGLCK---EGIKDGATMK------------------TFCGTPEYLAP 321
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
E++ +Y VD + G+V+ E++ GR+P
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +++SL H N+IR + + LV E GG L E + + +D
Sbjct: 56 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKD 114
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ + + Y H +N+ HRDL +N L D + + DFGLA G
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG------------ 162
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
T VG PY+++P+++ G Y D +S G+++
Sbjct: 163 ----------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHS-MNLIHRDLNSQN 229
+L V EY GG L + + R F +I + + YLHS N+++RDL +N
Sbjct: 222 RLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 279
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
++ +D + + DFGL + +G + T+ T G P ++AP
Sbjct: 280 LMLDKDGHIKITDFGLCK---EGIKDGATMK------------------TFCGTPEYLAP 318
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
E++ +Y VD + G+V+ E++ GR+P
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI R +L L+T Y G+L + LQ Q L + A A
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEPHLALRLAVSAAC 116
Query: 211 GMTYLH--------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
G+ +LH + HRD S+N LV+ + +AD GLA + QG + +
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG--SDYLDIGN 174
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQ------EYDETVDVFSYGIVLCEIIGR 316
P VG +MAPE++ Q E + D++++G+VL EI R
Sbjct: 175 NPR---------------VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
Query: 317 V----------PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFV 350
P D +P P F D + C P +
Sbjct: 220 TIVNGIVEDYRPPFYDVVPNDPSF----EDMKKVVCVDQQTPTI 259
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLT- 185
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 186 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLT- 189
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 190 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLT- 189
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 190 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +++SL H N+IR + + LV E GG L E + + +D
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKD 131
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ + + Y H +N+ HRDL +N L D + + DFGLA G
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG------------ 179
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
T VG PY+++P+++ G Y D +S G+++
Sbjct: 180 ----------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM 214
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLT- 185
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 186 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+V++LR + H N+I V + L+ E ++GG L + L + L + +F +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQ 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH+ + H DL +N ++ + + + DFGLA I G
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----------- 172
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
+ G P ++APE++ + D++S G++
Sbjct: 173 -----------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 32/167 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 203
+ L+ L H N++RF K +K + LVTE GTLK L+ R +
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR-S 133
Query: 204 FARDIAAGMTYLHSMN--LIHRDLNSQNCLVR-EDKTVVVADFGLARIIHQGPRAPTTVM 260
+ R I G+ +LH+ +IHRDL N + +V + D GLA + RA
Sbjct: 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRAS---F 186
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYG 307
AK V+G P + APE ++YDE+VDV+++G
Sbjct: 187 AKA----------------VIGTPEFXAPEXYE-EKYDESVDVYAFG 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 61/229 (26%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI R +L L+T Y G+L + LQ R+ + IA+
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS--IAS 145
Query: 211 GMTYLH--------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
G+ +LH + HRDL S+N LV+++ +AD GLA ++H V
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV-GN 203
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDET-----------VDVFSYGIVLC 311
P VG +MAPE++ DET VD++++G+VL
Sbjct: 204 NPR---------------VGTKRYMAPEVL-----DETIQVDCFDSYKRVDIWAFGLVLW 243
Query: 312 EIIGRV----------PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFV 350
E+ R+ P D +P P F D R C P +
Sbjct: 244 EVARRMVSNGIVEDYKPPFYDVVPNDPSF----EDMRKVVCVDQQRPNI 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEY-----IAGGTLKELLQDPGQPL 196
A + ++ +L+ L H NVI + V + +E + G L +++ Q L
Sbjct: 63 ARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQAL 120
Query: 197 PWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ V F + G+ Y+HS +IHRDL N V ED + + DFGLAR Q
Sbjct: 121 S-DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEE 176
Query: 256 PTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
T V ++ APE+M Y++TVD++S G ++ E++
Sbjct: 177 MT---------------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 61/229 (26%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI R +L L+T Y G+L + LQ R+ + IA+
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS--IAS 116
Query: 211 GMTYLH--------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
G+ +LH + HRDL S+N LV+++ +AD GLA ++H V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV-GN 174
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDET-----------VDVFSYGIVLC 311
P VG +MAPE++ DET VD++++G+VL
Sbjct: 175 NPR---------------VGTKRYMAPEVL-----DETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 312 EIIGRV----------PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFV 350
E+ R+ P D +P P F D R C P +
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDVVPNDPSF----EDMRKVVCVDQQRPNI 259
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 147 GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+++++ LHH +I ++ L+ E+++GG L + + + + +N+ R
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 207 DIAAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLA 246
G+ ++H +++H D+ +N C ++ +V + DFGLA
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 61/229 (26%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI R +L L+T Y G+L + LQ R+ + IA+
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS--IAS 116
Query: 211 GMTYLH--------SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
G+ +LH + HRDL S+N LV+++ +AD GLA ++H V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV-GN 174
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDET-----------VDVFSYGIVLC 311
P VG +MAPE++ DET VD++++G+VL
Sbjct: 175 NPR---------------VGTKRYMAPEVL-----DETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 312 EIIGRV----------PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFV 350
E+ R+ P D +P P F D R C P +
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDVVPNDPSF----EDMRKVVCVDQQRPNI 259
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L + H N+I ++ + YI ++ L Q L
Sbjct: 67 CQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 126
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 184
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 185 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 319 ADP 321
P
Sbjct: 229 IFP 231
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 40/182 (21%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 210
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 211 GMTYLHSMNLIHRDLNSQNCLVR-------------EDKTVVVADFGLARIIHQGPRAPT 257
G+ +LHS+ +IHRDL QN LV E+ ++++DFGL + + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM---TGQEYDETVDVFSYGIVLCEII 314
+ G W APE++ T + ++D+FS G V I+
Sbjct: 205 XNLNNPS-----------------GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 315 GR 316
+
Sbjct: 248 SK 249
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 40/182 (21%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 210
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 211 GMTYLHSMNLIHRDLNSQNCLVR-------------EDKTVVVADFGLARIIHQGPRAPT 257
G+ +LHS+ +IHRDL QN LV E+ ++++DFGL + + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM---TGQEYDETVDVFSYGIVLCEII 314
+ G W APE++ T + ++D+FS G V I+
Sbjct: 205 XNLNNPS-----------------GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 315 GR 316
+
Sbjct: 248 SK 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + +
Sbjct: 51 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSED 108
Query: 201 RVNF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTT 258
R F +I + + YLHS N+++RDL +N ++ +D + + DFGL + +G + T
Sbjct: 109 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 165
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRV 317
+ G P ++APE++ +Y VD + G+V+ E++ GR+
Sbjct: 166 MKX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
Query: 318 P 318
P
Sbjct: 208 P 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
E + VL++ H + +L V EY GG L + +
Sbjct: 53 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSED 110
Query: 201 RVNF-ARDIAAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTT 258
R F +I + + YLHS N+++RDL +N ++ +D + + DFGL + +G + T
Sbjct: 111 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 167
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRV 317
+ G P ++APE++ +Y VD + G+V+ E++ GR+
Sbjct: 168 MKX------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
Query: 318 P 318
P
Sbjct: 210 P 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHS-MNLIHRDLNSQN 229
+L V EY GG L + + R F +I + + YLHS N+++RDL +N
Sbjct: 83 RLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 140
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
++ +D + + DFGL + +G + T+ G P ++AP
Sbjct: 141 LMLDKDGHIKITDFGLCK---EGIKDGATMKX------------------FCGTPEYLAP 179
Query: 290 EMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
E++ +Y VD + G+V+ E++ GR+P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 65 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 124
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 182
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 183 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 319 ADP 321
P
Sbjct: 227 IFP 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 189
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 190 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRV--NF 204
+ ++ L H +++ + D L +V E++ G L E+++ + + V ++
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKT---VVVADFGLARIIHQGPRAPTTVMA 261
R I + Y H N+IHRD+ +N L+ + V + DFG+A I G
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVA--- 190
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
VG P++MAPE++ + Y + VDV+ G++L
Sbjct: 191 ----------------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 69 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 128
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 186
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 187 FLX----------------EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 319 ADP 321
P
Sbjct: 231 IFP 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 70 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 129
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 187
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 188 FLX----------------EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 319 ADP 321
P
Sbjct: 232 IFP 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 190
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 191 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 63 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 122
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 180
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 181 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 319 ADP 321
P
Sbjct: 225 IFP 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 191
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 192 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 182
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 183 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 189
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 190 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 73 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 132
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 190
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 191 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 319 ADP 321
P
Sbjct: 235 IFP 237
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 65 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 124
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 182
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 183 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 319 ADP 321
P
Sbjct: 227 IFP 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 189
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 190 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 143 CQNC-GQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWG 199
CQ ++ +L H N+I ++ + YI ++ L Q L
Sbjct: 67 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND 126
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTG 184
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
V ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 185 FLT----------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 319 ADP 321
P
Sbjct: 229 IFP 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 183
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 184 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F I G+ Y+HS N++HRDL N L+ + + DFGLAR+ P T
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLT- 205
Query: 264 PXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVPADP 321
V ++ APE M+ + Y +++D++S G +L E++ P P
Sbjct: 206 ---------------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP-LPWGQRVNFARDIA 209
+L ++ V+ L LV + GG LK + GQ P + V +A +I
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXX 269
G+ LH +++RDL +N L+ + + ++D GLA + +G T+ +
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----QTIKGR------- 345
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
VG +MAPE++ + Y + D ++ G +L E+I
Sbjct: 346 -----------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 30/149 (20%)
Query: 165 GVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRD 224
G+LY L TE + G +L++ + G LP Q + RD + +LHS L+H D
Sbjct: 130 GILY------LQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 225 LNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNP 284
+ N + + DFGL ++ G V G+P
Sbjct: 183 VKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQE--------------------GDP 220
Query: 285 YWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+MAPE++ G Y DVFS G+ + E+
Sbjct: 221 RYMAPELLQG-SYGTAADVFSLGLTILEV 248
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKL-NLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFA 205
++ +L+ + H NVI + V L N Y+ ++ LQ G +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ G+ Y+HS ++HRDL N V ED + + DFGLAR H V+ +
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTR--- 205
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII 314
++ APE +++ Y++TVD++S G ++ E++
Sbjct: 206 -------------------WYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 44/186 (23%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG---QPLPWGQRVN---FARDIAA 210
H NVIR+ DR L + E + L++L++ + L + N R IA+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 211 GMTYLHSMNLIHRDLNSQNCLVR-------------EDKTVVVADFGLARIIHQGPRAPT 257
G+ +LHS+ +IHRDL QN LV E+ ++++DFGL + + G
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM-------TGQEYDETVDVFSYGIVL 310
+ G W APE++ T + ++D+FS G V
Sbjct: 187 XNLNNPS-----------------GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 311 CEIIGR 316
I+ +
Sbjct: 230 YYILSK 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQP-LPWGQRVNFARDIA 209
+L ++ V+ L LV + GG LK + GQ P + V +A +I
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXX 269
G+ LH +++RDL +N L+ + + ++D GLA + +G T+ +
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----QTIKGR------- 345
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
VG +MAPE++ + Y + D ++ G +L E+I
Sbjct: 346 -----------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 142 ACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKL-NLVTEYIAGGTLKELLQDP-GQPLPWG 199
A + ++ +L+ + H NVI + V L N Y+ ++ LQ G
Sbjct: 67 AKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEE 126
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ + G+ Y+HS ++HRDL N V ED + + DFGLAR H V
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYV 184
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII 314
+ + ++ APE +++ Y++TVD++S G ++ E++
Sbjct: 185 VTR----------------------WYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ KL+L+ +YI GG L L + ++ + +I + +LH + +I+RD+ +N
Sbjct: 131 ETKLHLILDYINGGELFTHLSQRERFTEHEVQI-YVGEIVLALEHLHKLGIIYRDIKLEN 189
Query: 230 CLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWM 287
L+ + VV+ DFGL++ + + RA Y G +M
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERA----------------------YDFCGTIEYM 227
Query: 288 APEMMTGQE--YDETVDVFSYGIVLCEII 314
AP+++ G + +D+ VD +S G+++ E++
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 23/168 (13%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++A+L + H N+I+ + + LV E G D L R
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXX 267
+ + + YL ++IHRD+ +N ++ ED T+ + DFG A + +G
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--------------- 183
Query: 268 XXXXXXXXXXYTVVGNPYWMAPEMMTGQEY-DETVDVFSYGIVLCEII 314
YT G + APE++ G Y ++++S G+ L ++
Sbjct: 184 -------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 150
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 151 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 205
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 206 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
Query: 316 R 316
R
Sbjct: 253 R 253
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 111
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 112 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 166
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 167 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
Query: 316 R 316
R
Sbjct: 214 R 214
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 31/164 (18%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGM 212
HH +VI +++ LN++ EY+ TL ++L+ G+ +P + + +
Sbjct: 99 HHKSVIVNPS---QNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154
Query: 213 TYLHSMNLIHRDLNSQNCLVR-EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXX 271
++HS+ + HRD+ QN LV +D T+ + DFG A+ + P P+
Sbjct: 155 GFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL--IPSEPSVAX----------- 201
Query: 272 XXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
+ + ++ APE+M G EY ++D++S G V E+I
Sbjct: 202 ---------ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 137
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 138 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 192
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 193 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
Query: 316 R 316
R
Sbjct: 240 R 240
>pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
Length = 169
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 23/109 (21%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVV---GDHKFHPECF 87
C+ C + L + F + G ++CKED+ ++G C C Q + P VV D +H CF
Sbjct: 36 CADCQMQLADRCFSRAGSVYCKEDFFKRFGTKCTACQQGIP-PTQVVRKAQDFVYHLHCF 94
Query: 88 KCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYN 136
C C+ + G D +Y +DG L CKEDY
Sbjct: 95 ACIICNRQLATG-------------------DEFYLMEDGRLVCKEDYE 124
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 23/87 (26%)
Query: 63 CQNCGQ-MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C Q ++ ++ V D +H C KC C + L +
Sbjct: 9 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQ----------------------MQLADR 46
Query: 122 YFEKDGLLFCKEDYNGKYGEACQNCGQ 148
F + G ++CKED+ ++G C C Q
Sbjct: 47 CFSRAGSVYCKEDFFKRFGTKCTACQQ 73
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 112
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 113 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 167
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 168 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
Query: 316 R 316
R
Sbjct: 215 R 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 46/225 (20%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKEL-LQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
VI V ++ L+ EY AGG + L L + + + + + I G+ YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 219 NLIHRDLNSQNCLVRED---KTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXX 275
N++H DL QN L+ + + DFG++R I
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR------------------- 191
Query: 276 XXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSPDFGLD-Q 334
++G P ++APE++ D+++ GI+ ++ SP G D Q
Sbjct: 192 ---EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT---------SPFVGEDNQ 239
Query: 335 TDFRNKFCASC---PEPFVRIAFLCCDL-------NPDQRPPFEV 369
+ N + E F ++ L D NP++RP E+
Sbjct: 240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEI 284
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 117
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 118 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 172
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 173 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
Query: 316 R 316
R
Sbjct: 220 R 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
L H N++ FI KD +L LV++Y G+L + L + + A A+
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTAS 114
Query: 211 GMTYLHSMNLI---------HRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
G+ +LH M ++ HRDL S+N LV+++ T +AD GLA + H + T +
Sbjct: 115 GLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHD---SATDTID 169
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEM------MTGQEYDETVDVFSYGIVLCEIIG 315
P VG +MAPE+ M E + D+++ G+V EI
Sbjct: 170 IAPNHR-------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
Query: 316 R 316
R
Sbjct: 217 R 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 38/197 (19%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYK--DRK----LNLVTEYIAGGTLK--ELLQDPGQPLPWG 199
++ ++R + H NV+ Y D+K LNLV EY+ + Q +P
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTT 258
+ + + Y+HS+ + HRD+ QN L+ V+ + DFG A+I+ G +
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRV 317
+ ++ Y+ APE++ G Y +D++S G V+ E++
Sbjct: 202 ICSR----------------------YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
Query: 318 PADPDYLPRSPDFGLDQ 334
P P + G+DQ
Sbjct: 240 PLFPG------ESGIDQ 250
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 148 QVAVLRSLHHHNVIRF--------------IGVLYKDRKLNLVTEYIAGGTLKELLQDPG 193
++ ++R L H N+++ +G L + + +V EY+ L Q P
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP- 116
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR-EDKTVVVADFGLARII 249
L R+ F + G+ Y+HS N++HRDL N + ED + + DFGLARI+
Sbjct: 117 -LLEEHARL-FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ + L H ++ D ++ ++ E+++GG L E + D + + V + R
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCL--VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ G+ ++H N +H DL +N + + + + DFGL H P+ V
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT--AHLDPKQSVKV------ 315
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
G + APE+ G+ D++S G++
Sbjct: 316 --------------TTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ + L H ++ D ++ ++ E+++GG L E + D + + V + R
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCL--VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPX 265
+ G+ ++H N +H DL +N + + + + DFGL H P+ V
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT--AHLDPKQSVKV------ 209
Query: 266 XXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
G + APE+ G+ D++S G++
Sbjct: 210 --------------TTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 58/238 (24%)
Query: 111 CSACDVMLDNWYFEK----DGLLFCKEDYNGKYGEACQNCGQVA---------------- 150
S D+ +N YF+ DG + + G Y E C+ C A
Sbjct: 8 SSGVDLGTENLYFQSMVFSDGYVVKETIGVGSYSE-CKRCVHKATNMEYAVKVIDKSKRD 66
Query: 151 -------VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR-V 202
+LR H N+I V + + LVTE + GG ELL + + +R
Sbjct: 67 PSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG---ELLDKILRQKFFSEREA 123
Query: 203 NFA-RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPT 257
+F I + YLHS ++HRDL N L ++ + + DFG A+ + RA
Sbjct: 124 SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL----RAEN 179
Query: 258 TVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
++ T ++APE++ Q YDE D++S GI+L ++
Sbjct: 180 GLLM-----------------TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 152 LRSLHHHNVIRFIGVLY----KDRK---LNLVTEYIAGGTL----KELLQDPGQPLPWGQ 200
L LHH N+++ Y +DR+ LN+V EY+ TL + + P P
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILI 131
Query: 201 RVNFARDI-AAGMTYLHSMNLIHRDLNSQNCLVRE-DKTVVVADFGLARIIHQGPRAPTT 258
+V + I + G +L S+N+ HRD+ N LV E D T+ + DFG A+ + P P
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL--SPSEPNV 189
Query: 259 VMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
+ + Y+ APE++ G Q Y VD++S G + E++
Sbjct: 190 --------------------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 249 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 299
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 300 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 43/183 (23%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +++ L H ++ + + +V + + GG L+ LQ Q V+F +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---------QNVHFKEE 115
Query: 208 --------IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ + YL + +IHRD+ N L+ E V + DF +A ++ PR
Sbjct: 116 TVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML---PRETQIT 172
Query: 260 MAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT---GQEYDETVDVFSYGIVLCEII-G 315
T+ G +MAPEM + G Y VD +S G+ E++ G
Sbjct: 173 -------------------TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
Query: 316 RVP 318
R P
Sbjct: 214 RRP 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 263 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 313
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 314 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 123 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 173
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 174 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 124 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 174
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 175 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 124 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 174
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 175 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 61/215 (28%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-----DPG--------- 193
+V +++ LHH N+ R V ++ + LV E GG L + L G
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 194 ---------------------QPLPWGQR----VNFARDIAAGMTYLHSMNLIHRDLNSQ 228
+ L + QR N R I + + YLH+ + HRD+ +
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 229 NCLVREDKT--VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYW 286
N L +K+ + + DFGL++ ++ M T G PY+
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT-----------------TKAGTPYF 240
Query: 287 MAPEMM--TGQEYDETVDVFSYGIVL-CEIIGRVP 318
+APE++ T + Y D +S G++L ++G VP
Sbjct: 241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 124 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 174
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 175 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
++ +L+ L+H +I+ I + +V E + GG L + + + ++ F +
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ A + YLH +IHRDL +N L+ ED + + DFG ++I+ + T++M
Sbjct: 130 LLA-VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMR--- 180
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 181 --------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 66/210 (31%)
Query: 155 LHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
+ H N++ FI K +L L+T+Y G+L + L+ L + A +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVS 145
Query: 211 GMTYLHSM--------NLIHRDLNSQNCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMA 261
G+ +LH+ + HRDL S+N LV+++ T +AD GLA + I T
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD------TNEV 199
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETV-----------DVFSYGIVL 310
+P T VG +M PE++ DE++ D++S+G++L
Sbjct: 200 DIPPN------------TRVGTKRYMPPEVL-----DESLNRNHFQSYIMADMYSFGLIL 242
Query: 311 CEIIGR-----------------VPADPDY 323
E+ R VP+DP Y
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR-VNFA-RDI 208
+LR H N+I V + + LVTE + GG ELL + + +R +F I
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG---ELLDKILRQKFFSEREASFVLHTI 130
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKT----VVVADFGLARIIHQGPRAPTTVMAKVP 264
+ YLHS ++HRDL N L ++ + + DFG A+ + RA ++
Sbjct: 131 GKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL----RAENGLLM--- 183
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
T ++APE++ Q YDE D++S GI+L ++
Sbjct: 184 --------------TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 159 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
++ G + + +N+ E + GG+L +L+++ G LP + + + G+ YLHS
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSR 204
Query: 219 NLIHRDLNSQNCLVREDKT-VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXX 277
++H D+ + N L+ D + + DFG A + + +
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY-------------- 250
Query: 278 YTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+ G MAPE++ G+ D VDV+S
Sbjct: 251 --IPGTETHMAPEVVLGRSCDAKVDVWS 276
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 159 NVIRFIGV---LYKDRK-LNLVTEYIAGGTLKELLQDPG-QPLPWGQRVNFARDIAAGMT 213
+++R + V LY RK L +V E + GG L +QD G Q + + I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR 247
YLHS+N+ HRD+ +N L R + + + DFG A+
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 148 QVAVLRSLHHHNVI--RFIGVLYKD---RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 202
++ +L HH N++ R I V +++ KL LVTE + L +++ D +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQ 137
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR-----------IIHQ 251
F I G+ LH ++HRDL+ N L+ ++ + + DF LAR + H+
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 252 GPRAPTTVM 260
RAP VM
Sbjct: 198 WYRAPELVM 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 148 QVAVLRSLHHHNVI--RFIGVLYKD---RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 202
++ +L HH N++ R I V +++ KL LVTE + L +++ D +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQ 137
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR-----------IIHQ 251
F I G+ LH ++HRDL+ N L+ ++ + + DF LAR + H+
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 252 GPRAPTTVM 260
RAP VM
Sbjct: 198 WYRAPELVM 206
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 42/238 (17%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN--LVTEYIAGGTLKELLQDPGQ-PLPWGQRVNFARDI 208
LR H NV+ +G + L+T ++ G+L +L + + Q V FA D+
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 209 AAGMTYLHSMN-LIHRD-LNSQNCLVREDKT--VVVADFGLARIIHQGPRAPTTVMAKVP 264
A GM +LH++ LI R LNS++ ++ ED T + +AD + ++P + A
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYA--- 171
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYD---ETVDVFSYGIVLCEIIGR-VP-A 319
P W+APE + + D + D++S+ ++L E++ R VP A
Sbjct: 172 -------------------PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 212
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
D + L+ R ++ +C + +P +RP F+++ LE +
Sbjct: 213 DLSNMEIGMKVALE--GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGG---ELFEDIVAREYYSEADASHCI 109
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + + H M ++HRDL +N L+ + V +ADFGLA + +A
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA------- 162
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ + Y + VD+++ G++L
Sbjct: 163 --------------WFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
KL+ + + + GG L L G R +A +I G+ ++H+ +++RDL N L
Sbjct: 265 KLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRFVVYRDLKPANIL 323
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ E V ++D GLA K P + VG +MAPE+
Sbjct: 324 LDEHGHVRISDLGLA----------CDFSKKKP-------------HASVGTHGYMAPEV 360
Query: 292 M-TGQEYDETVDVFSYGIVLCEII 314
+ G YD + D FS G +L +++
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
KL+ + + + GG L L G R +A +I G+ ++H+ +++RDL N L
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ E V ++D GLA K P + VG +MAPE+
Sbjct: 325 LDEHGHVRISDLGLA----------CDFSKKKP-------------HASVGTHGYMAPEV 361
Query: 292 M-TGQEYDETVDVFSYGIVLCEII 314
+ G YD + D FS G +L +++
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
KL+ + + + GG L L G R +A +I G+ ++H+ +++RDL N L
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ E V ++D GLA K P + VG +MAPE+
Sbjct: 325 LDEHGHVRISDLGLA----------CDFSKKKP-------------HASVGTHGYMAPEV 361
Query: 292 M-TGQEYDETVDVFSYGIVLCEII 314
+ G YD + D FS G +L +++
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
KL+ + + + GG L L G R +A +I G+ ++H+ +++RDL N L
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRFVVYRDLKPANIL 324
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ E V ++D GLA K P + VG +MAPE+
Sbjct: 325 LDEHGHVRISDLGLA----------CDFSKKKP-------------HASVGTHGYMAPEV 361
Query: 292 M-TGQEYDETVDVFSYGIVLCEII 314
+ G YD + D FS G +L +++
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G +LK + GQ LP + + + +I ++YLHS+ L++ DL +N ++ E
Sbjct: 161 IVMEYVGGQSLK---RSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 235 DKTVVVADFGLARI 248
++ ++ ++RI
Sbjct: 218 EQLKLIDLGAVSRI 231
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 159 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
++ G + + +N+ E + GG+L +L+++ G LP + + + G+ YLHS
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSR 185
Query: 219 NLIHRDLNSQNCLVREDKT-VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXX 277
++H D+ + N L+ D + + DFG A + +
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY-------------- 231
Query: 278 YTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+ G MAPE++ G+ D VDV+S
Sbjct: 232 --IPGTETHMAPEVVLGRSCDAKVDVWS 257
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQP--LPWGQRVN 203
+ VL+ L+H N+++ + + R L+ E+ G+L +L++P LP + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCL--VREDKTVV--VADFGLAR 247
RD+ GM +L ++HR++ N + + ED V + DFG AR
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+V +LR + H N+I+ + LV + + G L + L + L + R
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMR 131
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ + LH +N++HRDL +N L+ +D + + DFG + + G +
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------------ 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMM------TGQEYDETVDVFSYGIVLCEIIGRVP 318
+V G P ++APE++ Y + VD++S G+++ ++ P
Sbjct: 180 ----------LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 157 HHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLH 216
+ N++ I D + LV E + GG++ +Q + + RD+AA + +LH
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ-KHFNEREASRVVRDVAAALDFLH 128
Query: 217 SMNLIHRDLNSQNCLVREDKTVV---VADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXX 273
+ + HRDL +N L + V + DF L + ++
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT--------- 179
Query: 274 XXXXYTVVGNPYWMAPEMM---TGQE--YDETVDVFSYGIVLCEIIGRVP 318
T G+ +MAPE++ T Q YD+ D++S G+VL ++ P
Sbjct: 180 -----TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCL 231
+L V E++ GG L +Q + + +A +I + + +LH +I+RDL N L
Sbjct: 98 RLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVL 156
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEM 291
+ + +ADFG+ + +G T T G P ++APE+
Sbjct: 157 LDHEGHCKLADFGMCK---EGICNGVTTA------------------TFCGTPDYIAPEI 195
Query: 292 MTGQEYDETVDVFSYGIVLCEII-GRVP 318
+ Y VD ++ G++L E++ G P
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N L+
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVLIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKD--RKLNLVTEYIAGGTLKELLQDPGQP--LPWGQRVN 203
+ VL+ L+H N+++ + + R L+ E+ G+L +L++P LP + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCL--VREDKTVV--VADFGLAR 247
RD+ GM +L ++HR++ N + + ED V + DFG AR
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPXXXXX 269
G+ Y+H ++HRD+ + N L+ D + +ADFGLAR + P +V
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL--- 193
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVP 318
++ PE++ G+ +Y +D++ G ++ E+ R P
Sbjct: 194 ---------------WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADASHCI 111
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------- 161
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 162 ------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADASHCI 110
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------- 160
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 161 ------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPXXXXX 269
G+ Y+H ++HRD+ + N L+ D + +ADFGLAR + P +V
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL--- 193
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVP 318
++ PE++ G+ +Y +D++ G ++ E+ R P
Sbjct: 194 ---------------WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADASHCI 111
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------- 161
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 162 ------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
D L LV +Y GG L LL LP + ++ + +H ++ +HRD+ N
Sbjct: 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 205
Query: 230 CLVREDKTVVVADFGL-ARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMA 288
L+ + + +ADFG +++ G TV + V VG P +++
Sbjct: 206 ILMDMNGHIRLADFGSCLKLMEDG-----TVQSSV----------------AVGTPDYIS 244
Query: 289 PEMMTGQE-----YDETVDVFSYGIVLCEII-GRVP 318
PE++ E Y D +S G+ + E++ G P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+V +LR + H N+I+ + LV + + G L + L + L + R
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMR 118
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ + LH +N++HRDL +N L+ +D + + DFG + + G +
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------------ 166
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMM------TGQEYDETVDVFSYGIVLCEIIGRVP 318
V G P ++APE++ Y + VD++S G+++ ++ P
Sbjct: 167 ----------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPXXXXX 269
G+ Y+H ++HRD+ + N L+ D + +ADFGLAR + P +V
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL--- 193
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVP 318
++ PE++ G+ +Y +D++ G ++ E+ R P
Sbjct: 194 ---------------WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 211 GMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPXXXXX 269
G+ Y+H ++HRD+ + N L+ D + +ADFGLAR + P +V
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL--- 192
Query: 270 XXXXXXXXYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEIIGRVP 318
++ PE++ G+ +Y +D++ G ++ E+ R P
Sbjct: 193 ---------------WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 109 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 164
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 165 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 202
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMIFR 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFEDIVAREFYSEADASHCI 134
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------- 184
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 185 ------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+V +LR + H N+I+ + LV + + G L + L + L + R
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMR 131
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ + LH +N++HRDL +N L+ +D + + DFG + + G +
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------------ 179
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMM------TGQEYDETVDVFSYGIVLCEIIGRVP 318
V G P ++APE++ Y + VD++S G+++ ++ P
Sbjct: 180 ----------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRV--NF 204
+ ++ L H +++ + D L +V E++ G L E+++ + + V ++
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKT---VVVADFGLARIIHQGPRAPTTVMA 261
R I + Y H N+IHRD+ L+ + V + FG+A I G
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVA--- 192
Query: 262 KVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
VG P++MAPE++ + Y + VDV+ G++L
Sbjct: 193 ----------------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 225
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 110 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 203
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFR 227
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRV--NF 204
+ ++ L H +++ + D L +V E++ G L E+++ + + V ++
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
R I + Y H N+IHRD+ L+ + G + Q + +
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR-- 193
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
VG P++MAPE++ + Y + VDV+ G++L
Sbjct: 194 ----------------VGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 110 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 203
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 204 DYQMYDYSLDMWSLGCMLASMIFR 227
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 204
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-R 233
LV E++ K+L Q + R + +I + Y HSM ++HRD+ N ++
Sbjct: 116 LVFEHVNNTDFKQLYQTLTD---YDIRF-YMYEILKALDYCHSMGIMHRDVKPHNVMIDH 171
Query: 234 EDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMT 293
E + + + D+GLA H G V ++ Y+ PE++
Sbjct: 172 EHRKLRLIDWGLAEFYHPGQEYNVRVASR----------------------YFKGPELLV 209
Query: 294 G-QEYDETVDVFSYGIVLCEIIGR 316
Q YD ++D++S G +L +I R
Sbjct: 210 DYQMYDYSLDMWSLGCMLASMIFR 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 159 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
++ G + + +N+ E + GG+L +L++ G LP + + + G+ YLH+
Sbjct: 111 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR 169
Query: 219 NLIHRDLNSQNCLVREDKT-VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXX 277
++H D+ + N L+ D + + DFG A + + +
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-------------- 215
Query: 278 YTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+ G MAPE++ G+ D VD++S
Sbjct: 216 --IPGTETHMAPEVVMGKPCDAKVDIWS 241
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 159 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
++ G + + +N+ E + GG+L +L++ G LP + + + G+ YLH+
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR 183
Query: 219 NLIHRDLNSQNCLVREDKT-VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXX 277
++H D+ + N L+ D + + DFG A + + +
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-------------- 229
Query: 278 YTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+ G MAPE++ G+ D VD++S
Sbjct: 230 --IPGTETHMAPEVVMGKPCDAKVDIWS 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 159 NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSM 218
++ G + + +N+ E + GG+L +L++ G LP + + + G+ YLH+
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR 185
Query: 219 NLIHRDLNSQNCLVREDKT-VVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXX 277
++H D+ + N L+ D + + DFG A + + +
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-------------- 231
Query: 278 YTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+ G MAPE++ G+ D VD++S
Sbjct: 232 --IPGTETHMAPEVVMGKPCDAKVDIWS 257
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLV-REDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ +I + Y HSM ++HRD+ N ++ E + + + D+GLA H G V ++
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGR 316
Y+ PE++ Q YD ++D++S G +L +I R
Sbjct: 196 ----------------------YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ +LR + H ++I I + LV + + G L + L + L + + R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMR 207
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXX 266
+ +++LH+ N++HRDL +N L+ ++ + ++DFG + + G +
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK------------ 255
Query: 267 XXXXXXXXXXXYTVVGNPYWMAPEMM------TGQEYDETVDVFSYGIVLCEIIGRVP 318
+ G P ++APE++ T Y + VD+++ G++L ++ P
Sbjct: 256 ----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ LV + + GG EL +D + +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG---ELFEDIVAREYYSEADASHCI 136
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAK 262
I + ++H +++HRDL +N L+ + V +ADFGLA I QG +
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQ-------- 187
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 188 ------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 148 QVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD--PGQPLPWGQRVNFA 205
+ + R L H N++R + ++ L+ + + GG EL +D + +
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG---ELFEDIVAREYYSEADASHCI 127
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ I + + H M ++HRDL +N L+ + V +ADFGLA + +A
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA------- 180
Query: 263 VPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G P +++PE++ Y + VD+++ G++L
Sbjct: 181 --------------WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR--DI 208
+LR H N+I V + + +VTE + GG ELL + + +R A I
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG---ELLDKILRQKFFSEREASAVLFTI 125
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVRED----KTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ YLH+ ++HRDL N L ++ +++ + DFG A+ + RA ++
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL----RAENGLLM--- 178
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
T ++APE++ Q YD D++S G++L ++
Sbjct: 179 --------------TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 173 LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV 232
L LV EY GG L LL G+ +P + +I + +H + +HRD+ N L+
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 233 REDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMM 292
+ +ADFG + RA TV + V VG P +++PE++
Sbjct: 196 DRCGHIRLADFGSCLKL----RADGTVRSLV----------------AVGTPDYLSPEIL 235
>pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVV---GDHKFHPECF 87
CS C V L F + ++CK+D+ ++G C C Q+ P VV D +H CF
Sbjct: 36 CSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAAC-QLGIPPTQVVRRAQDFVYHLHCF 94
Query: 88 KCTSCSCCIGDGESYALVERS-ILCSA 113
C C + G+ + L+E S ++C A
Sbjct: 95 ACVVCKRQLATGDEFYLMEDSRLVCKA 121
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 107 RSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNC 146
+ + CS C V L F + ++CK+D+ ++G C C
Sbjct: 32 KCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAAC 71
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRED--KTVVVADFGLARIIHQGPRAPTTVM 260
FA I + LH +IH DL +N L+++ + V DFG + HQ
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ--------- 254
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPAD 320
YT + + ++ APE++ G Y +D++S G +L E++ P
Sbjct: 255 ---------------RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
Query: 321 P 321
P
Sbjct: 300 P 300
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR--DI 208
+LR H N+I V + + +VTE GG ELL + + +R A I
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGG---ELLDKILRQKFFSEREASAVLFTI 125
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVRED----KTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ YLH+ ++HRDL N L ++ +++ + DFG A+ + RA ++
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL----RAENGLLX--- 178
Query: 265 XXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
T ++APE++ Q YD D++S G++L
Sbjct: 179 --------------TPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQN 229
+ L LV +Y GG L LL LP + ++ + +H ++ +HRD+ N
Sbjct: 162 ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 221
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPXXXXXXXXXXXXXYTVVGNPYWMAP 289
L+ + + +ADFG ++ ++V VG P +++P
Sbjct: 222 VLLDVNGHIRLADFGSCLKMNDDGTVQSSV--------------------AVGTPDYISP 261
Query: 290 EMMTGQE-----YDETVDVFSYGIVLCEII-GRVP 318
E++ E Y D +S G+ + E++ G P
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVRED--KTVVVADFGLARIIHQGPRAPTTVM 260
FA I + LH +IH DL +N L+++ + V DFG + HQ
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ--------- 254
Query: 261 AKVPXXXXXXXXXXXXXYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPAD 320
YT + + ++ APE++ G Y +D++S G +L E++ P
Sbjct: 255 ---------------RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
Query: 321 P 321
P
Sbjct: 300 P 300
>pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVV---GDHKFHPECF 87
CS C V L F + ++CK+D+ ++G C C Q+ P VV D +H CF
Sbjct: 90 CSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAAC-QLGIPPTQVVRRAQDFVYHLHCF 148
Query: 88 KCTSCSCCIGDGESYALVERS-ILCSA 113
C C + G+ + L+E S ++C A
Sbjct: 149 ACVVCKRQLATGDEFYLMEDSRLVCKA 175
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 107 RSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNC 146
+ + CS C V L F + ++CK+D+ ++G C C
Sbjct: 86 KCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAAC 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,704,950
Number of Sequences: 62578
Number of extensions: 594540
Number of successful extensions: 3971
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 1439
Number of HSP's gapped (non-prelim): 1318
length of query: 433
length of database: 14,973,337
effective HSP length: 102
effective length of query: 331
effective length of database: 8,590,381
effective search space: 2843416111
effective search space used: 2843416111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)