RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6593
(433 letters)
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 324 bits (832), Expect = e-109
Identities = 146/259 (56%), Positives = 179/259 (69%), Gaps = 8/259 (3%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V V+R L H NV++FIGVLYKD++LN +TEYI GGTL+ +++ PW QRV+FA+DI
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
A+GM YLHSMN+IHRDLNS NCLVRE+K VVVADFGLAR++ P +
Sbjct: 118 ASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG-------LRS 170
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRSP 328
++ RKKRYTVVGNPYWMAPEM+ G+ YDE VDVFS+GIVLCEIIGRV ADPDYLPR+
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM 230
Query: 329 DFGLDQTDFRNKFC-ASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKPL 387
DFGL+ F +++C +CP F I CCDL+P++RP F LE WLE L MHL+ PL
Sbjct: 231 DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPL 290
Query: 388 PSDLEADIYQFATRKSASP 406
LE F
Sbjct: 291 GPQLEQLDRGFWETYRRGE 309
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 213 bits (544), Expect = 2e-66
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 28/248 (11%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL--QDPGQPLPWGQRVNFAR 206
VA+++ L H N++ F+G + + L++VTEY++ G+L LL + L +R++ A
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 207 DIAAGMTYLHSMN--LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
D+A GM YLH+ N ++HR+L S N LV + TV V DFGL+R+ + +
Sbjct: 145 DVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA----- 199
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVPADPDY 323
G P WMAPE++ + +E DV+S+G++L E+ + P +
Sbjct: 200 ----------------AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNL 242
Query: 324 LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSV 383
P + R + + I C P +RP F + L L +V
Sbjct: 243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS-AV 301
Query: 384 DKPLPSDL 391
P SDL
Sbjct: 302 PPPNRSDL 309
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 206 bits (526), Expect = 8e-64
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V VLR H N++ F+G + L +VT++ G +L L + ++ AR
Sbjct: 71 VGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
A GM YLH+ ++IHRDL S N + ED TV + DFGLA + +
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE--------- 180
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVPADPDYL 324
+ G+ WMAPE++ Q+ Y DV+++GIVL E++ G++P +
Sbjct: 181 ----------QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-SNIN 229
Query: 325 PRSPDFGLDQTDFR----NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
R + +K ++CP+ R+ C D+RP F + +E L+
Sbjct: 230 NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 204 bits (522), Expect = 3e-63
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 37/240 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V ++ +L+H N+++ G+++ +V E++ G L L D P+ W ++ DI
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 209 AAGMTYLHSMN--LIHRDLNSQNCLVRE-----DKTVVVADFGLARIIHQGPRAPTTVMA 261
A G+ Y+ + N ++HRDL S N ++ VADFGL++ +V
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------SVSG 185
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRVP 318
++GN WMAPE + +E Y E D +S+ ++L I+ G P
Sbjct: 186 ------------------LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 319 -ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
+ Y + + R CP + LC +P +RP F + L L
Sbjct: 228 FDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 205 bits (523), Expect = 3e-63
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 29/237 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
VAVLR H N++ F+G + KD L +VT++ G +L + L Q ++ AR
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
A GM YLH+ N+IHRD+ S N + E TV + DFGLA + + +
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT------ 195
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVLCEII-GRVPADPDYL 324
G+ WMAPE++ Q+ + DV+SYGIVL E++ G +P
Sbjct: 196 -------------GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY-SHIN 241
Query: 325 PRSPDFGLDQTDFR----NKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
R + + +K +CP+ R+ C ++RP F + +E L
Sbjct: 242 NRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 202 bits (516), Expect = 5e-62
Identities = 53/242 (21%), Positives = 88/242 (36%), Gaps = 34/242 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V R H NV+ F+G L ++T G TL +++D L + A++I
Sbjct: 80 VMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
GM YLH+ ++H+DL S+N ++ VV+ DFGL I ++
Sbjct: 140 VKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQ---- 194
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQE---------YDETVDVFSYGIVLCEII-GRVP 318
G +APE++ + + DVF+ G + E+ P
Sbjct: 195 ------------NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
Query: 319 ---ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+ + G+ + + I C ++RP F L LE
Sbjct: 243 FKTQPAEAIIWQMGTGMKPNLSQI----GMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
Query: 376 GL 377
L
Sbjct: 299 KL 300
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 200 bits (510), Expect = 1e-61
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 38/241 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ L H N+I GV K+ L LV E+ GG L +L G+ +P VN+A I
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQI 114
Query: 209 AAGMTYLHSMN---LIHRDLNSQNCLVRE--------DKTVVVADFGLARIIHQGPRAPT 257
A GM YLH +IHRDL S N L+ + +K + + DFGLAR H+ T
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-----T 169
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GR 316
T M + G WMAPE++ + + DV+SYG++L E++ G
Sbjct: 170 TKM------------------SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
VP + +G+ ++CPEPF ++ C + +P RP F + L
Sbjct: 212 VPF-RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270
Query: 377 L 377
+
Sbjct: 271 I 271
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 197 bits (502), Expect = 4e-60
Identities = 71/249 (28%), Positives = 102/249 (40%), Gaps = 34/249 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL--QDPGQPLPWGQRVNFAR 206
+ L ++H N+++ G + LV EY GG+L +L +P +++
Sbjct: 52 LRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 109
Query: 207 DIAAGMTYLHSMN---LIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAK 262
+ G+ YLHSM LIHRDL N L+ TV+ + DFG A I T M
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMT- 161
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVPADP 321
G+ WMAPE+ G Y E DVFS+GI+L E+I R P D
Sbjct: 162 ----------------NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
P R + P+P + C +P QRP E + + L +
Sbjct: 206 IGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265
Query: 382 S-VDKPLPS 389
D+PL
Sbjct: 266 PGADEPLQY 274
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 191 bits (488), Expect = 2e-58
Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 36/239 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNL--VTEYIAGGTLKELLQD-PGQPLPWGQRVNFA 205
LR H NV+ +G + +T ++ G+L +L + + Q V FA
Sbjct: 58 CPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA 117
Query: 206 RDIAAGMTYLHSMN--LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
D+A GM +LH++ + LNS++ ++ ED T ++ +
Sbjct: 118 LDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP----------- 166
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYD---ETVDVFSYGIVLCEII-GRVPA 319
+ P W+APE + + D + D++S+ ++L E++ VP
Sbjct: 167 ---------------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
D + R ++ +C + +P +RP F+++ LE +
Sbjct: 212 A-DLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 177 bits (450), Expect = 1e-51
Identities = 70/236 (29%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+L+ H N++R IGV + + + +V E + GG L+ G L + D A
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
AGM YL S IHRDL ++NCLV E + ++DFG++R G A + + +VP K
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK--- 280
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRS 327
W APE + Y DV+S+GI+L E G P Y
Sbjct: 281 ----------------WTAPEALNYGRYSSESDVWSFGILLWETFSLGASP----Y---- 316
Query: 328 PDFGLDQT------DFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
P+ QT R CP+ R+ C P QRP F + L+ +
Sbjct: 317 PNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 174 bits (444), Expect = 3e-51
Identities = 53/273 (19%), Positives = 92/273 (33%), Gaps = 57/273 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
+ + H N++ FI K L+T+Y G+L + L+ L +
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKL 139
Query: 205 ARDIAAGMTYLHSMNL--------IHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
A +G+ +LH+ HRDL S+N LV+++ T +AD GLA
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG------QEYDETVDVFSYGIVL 310
T VG +M PE++ + D++S+G++L
Sbjct: 200 DIPP-----------------NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
Query: 311 CEIIGRVPADP----------DYLPRSPDFGLDQT-----DFR-----NKFCASCPEPFV 350
E+ R + D +P P + + R C
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302
Query: 351 RIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSV 383
++ C NP R ++ L +S +
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 173 bits (441), Expect = 4e-51
Identities = 59/267 (22%), Positives = 99/267 (37%), Gaps = 57/267 (21%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
+ L H N++ FI R + L+T Y G+L + LQ L +
Sbjct: 53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRI 110
Query: 205 ARDIAAGMTYLHS--------MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
IA+G+ +LH + HRDL S+N LV+++ +AD GLA + Q
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ----- 165
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQ------EYDETVDVFSYGIVL 310
+T V VG +MAPE++ + + VD++++G+VL
Sbjct: 166 STNQLDVGNNPR------------VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
Query: 311 CEIIGRVPADP----------DYLPRSPDFGLDQT-----DFR-----NKFCASCPEPFV 350
E+ R+ ++ D +P P F + R F
Sbjct: 214 WEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 273
Query: 351 RIAFLCCDLNPDQRPPFEVLEVWLEGL 377
++ C NP R ++ L +
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 173 bits (440), Expect = 5e-51
Identities = 56/268 (20%), Positives = 87/268 (32%), Gaps = 57/268 (21%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
+ L H N++ FI KD LV++Y G+L + L + +
Sbjct: 48 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKL 105
Query: 205 ARDIAAGMTYLHS--------MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
A A+G+ +LH + HRDL S+N LV+++ T +AD GLA
Sbjct: 106 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG------QEYDETVDVFSYGIVL 310
VG +MAPE++ E + D+++ G+V
Sbjct: 166 DIAP-----------------NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208
Query: 311 CEIIGRVPADP----------DYLPRSPDFGLDQT-----DFR-----NKFCASCPEPFV 350
EI R D +P P + R
Sbjct: 209 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA 268
Query: 351 RIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
+I C N R ++ L LS
Sbjct: 269 KIMRECWYANGAARLTALRIKKTLSQLS 296
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 170 bits (433), Expect = 2e-49
Identities = 57/273 (20%), Positives = 88/273 (32%), Gaps = 57/273 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
+ L H N++ FI KD LV++Y G+L + L + +
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKL 144
Query: 205 ARDIAAGMTYLHS--------MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
A A+G+ +LH + HRDL S+N LV+++ T +AD GLA
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG------QEYDETVDVFSYGIVL 310
VG +MAPE++ E + D+++ G+V
Sbjct: 205 DIAP-----------------NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247
Query: 311 CEIIGRVPAD---PDY-LPRSPDFGLDQTDF----------------RNKFCASCPEPFV 350
EI R DY LP D +
Sbjct: 248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA 307
Query: 351 RIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSV 383
+I C N R ++ L LS +
Sbjct: 308 KIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 160 bits (407), Expect = 7e-46
Identities = 59/287 (20%), Positives = 98/287 (34%), Gaps = 60/287 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKD-----RKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 203
+ + + H N+ RFI + + LV EY G+L + L W
Sbjct: 58 IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCR 115
Query: 204 FARDIAAGMTYLHSMNL---------IHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
A + G+ YLH+ HRDLNS+N LV+ D T V++DFGL+ +
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 255 APTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG-------QEYDETVDVFSYG 307
+ VG +MAPE++ G + + VD+++ G
Sbjct: 176 VRPGEEDNAAI-------------SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
Query: 308 IVLCEIIGRVPAD------PDY-LPRSPDFGLDQT--DFRNKFC---------------A 343
++ EI R P+Y + + G T D + +
Sbjct: 223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENS 282
Query: 344 SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKPLPSD 390
C D + + R + E + L M +K +
Sbjct: 283 LAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPT 329
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 159 bits (405), Expect = 1e-45
Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 61/275 (22%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN----LVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
V L + H N+++FIG + ++ L+T + G+L + L+ + W + +
Sbjct: 69 VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHI 126
Query: 205 ARDIAAGMTYLHSMNL----------IHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
A +A G+ YLH HRD+ S+N L++ + T +ADFGLA G
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 255 APTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG-----QEYDETVDVFSYGIV 309
A T VG +MAPE++ G ++ +D+++ G+V
Sbjct: 187 AGDTH-------------------GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227
Query: 310 LCEII-GRVPAD---PDY-------LPRSPDFG-----LDQTDFRNKFCASCPE-----P 348
L E+ AD +Y + + P + R +
Sbjct: 228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287
Query: 349 FVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSV 383
C D + + R + + + ++
Sbjct: 288 LCETIEECWDHDAEARLSAGCVGERITQMQRLTNI 322
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 163 bits (415), Expect = 1e-45
Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 61/292 (20%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ-----NCGQVAV-------------------LRS 154
D W E+ + + G+YGE + VAV ++
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 272
Query: 155 LHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMT 213
+ H N+++ +GV ++ ++TE++ G L + L++ Q + + A I++ M
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGA 273
YL N IHR+L ++NCLV E+ V VADFGL+R++ AK P K
Sbjct: 333 YLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIK------- 384
Query: 274 RKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPDFG 331
W APE + ++ DV+++G++L EI G P Y P
Sbjct: 385 ------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----Y----PGID 424
Query: 332 LDQT------DFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
L Q D+R + CPE + C NP RP F + E +
Sbjct: 425 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 159 bits (403), Expect = 4e-44
Identities = 81/289 (28%), Positives = 121/289 (41%), Gaps = 61/289 (21%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ----NCGQVAV-------------------LRSL 155
D W ++ L + G +GE +VA+ ++ L
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 236
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTY 214
H +++ V+ ++ +VTEY++ G+L + L+ G+ L Q V+ A IA+GM Y
Sbjct: 237 RHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGAR 274
+ MN +HRDL + N LV E+ VADFGLAR+I AK P K
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK-------- 346
Query: 275 KKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPDFGL 332
W APE + DV+S+GI+L E+ GRVP Y P
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----Y----PGMVN 387
Query: 333 DQT------DFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLE 375
+ +R CPE + C P++RP FE L+ +LE
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 154 bits (392), Expect = 4e-44
Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 41/254 (16%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDI 208
AV++ + H N+++ +GV ++ ++TE++ G L + L++ Q + + A I
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
++ M YL N IHRDL ++NCLV E+ V VADFGL+R++ AK P K
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIK-- 177
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPR 326
W APE + ++ DV+++G++L EI G P Y
Sbjct: 178 -----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----Y--- 213
Query: 327 SPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLS 378
G+D + CPE + C NP RP F + E +
Sbjct: 214 ---PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
Query: 379 MHLSVDKPLPSDLE 392
S+ + +L
Sbjct: 271 QESSISDEVEKELG 284
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 158 bits (401), Expect = 8e-44
Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 57/290 (19%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ---NCGQVAV------------------LRSLHH 157
W L + G++G+ +VAV + L H
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH 245
Query: 158 HNVIRFIGVLYKDR-KLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTYL 215
N+++ +GV+ +++ L +VTEY+A G+L + L+ L + F+ D+ M YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 216 HSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARK 275
N +HRDL ++N LV ED V+DFGL + T K+P K
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVK--------- 351
Query: 276 KRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRSPD---F 330
W APE + +++ DV+S+GI+L EI GRVP Y PR P
Sbjct: 352 ----------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP----Y-PRIPLKDVV 396
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMH 380
+ ++ CP + C L+ RP F L LE + H
Sbjct: 397 PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 154 bits (392), Expect = 9e-44
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 50/244 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+++ H N+IR GV+ + R +VTEY+ G+L L+ Q V R +
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVG 161
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM-AKVPRKAA 268
AGM YL + +HRDL ++N LV + V+DFGL+R++ P A T K+P +
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR-- 219
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP-------- 318
W APE + + + DV+S+G+V+ E++ G P
Sbjct: 220 -----------------WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
Query: 319 ----ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
+ Y LP CP ++ C + QRP F +
Sbjct: 263 VISSVEEGYRLPAPMG---------------CPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Query: 374 LEGL 377
L+ L
Sbjct: 308 LDAL 311
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 153 bits (389), Expect = 1e-43
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 37/247 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ +L+SL H N++++ GV Y + L L+ EY+ G+L++ LQ + + + + +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPR 265
I GM YL + IHRDL ++N LV + V + DFGL +++ Q + P
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-------GRVP 318
W APE +T ++ DV+S+G+VL E+
Sbjct: 182 F-------------------WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
Query: 319 ADPDYLPRSPDFGLDQTDFRNKF-------C-ASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + CP+ I C + N +QRP F L
Sbjct: 223 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Query: 371 EVWLEGL 377
+ ++ +
Sbjct: 283 ALRVDQI 289
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 155 bits (393), Expect = 2e-43
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+++ H N+IR GV+ K + + +VTEY+ G+L L+ Q V R IA
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP-TTVMAKVPRKAA 268
+GM YL M +HRDL ++N L+ + V+DFGL R++ P A TT K+P +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP-------- 318
W +PE + +++ DV+SYGIVL E++ G P
Sbjct: 216 -----------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 319 ----ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
D Y LP D CP ++ C + + RP FE +
Sbjct: 259 VIKAVDEGYRLPPPMD---------------CPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 374 LEGL 377
L+ L
Sbjct: 304 LDKL 307
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 158 bits (402), Expect = 2e-43
Identities = 82/310 (26%), Positives = 125/310 (40%), Gaps = 61/310 (19%)
Query: 114 CDVMLDNWYFEKDGLLFCKEDYNGKYGEACQ----NCGQVAV------------------ 151
+ D W ++ L + G +GE +VA+
Sbjct: 255 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 314
Query: 152 -LRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIA 209
++ L H +++ V+ ++ + +VTEY++ G+L + L+ G+ L Q V+ A IA
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
+GM Y+ MN +HRDL + N LV E+ VADFGLAR+I AK P K
Sbjct: 374 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIK--- 429
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLPRS 327
W APE + DV+S+GI+L E+ GRVP Y
Sbjct: 430 ----------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----Y---- 465
Query: 328 PDFGLDQT------DFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHL 381
P + +R CPE + C P++RP FE L+ +LE
Sbjct: 466 PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525
Query: 382 SVDKPLPSDL 391
+L
Sbjct: 526 EPQYQPGENL 535
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 151 bits (385), Expect = 2e-43
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+ L H +++F GV K+ + +VTEYI+ G L L+ G+ L Q + D+
Sbjct: 55 QTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
GM +L S IHRDL ++NCLV D V V+DFG+ R + + K P K
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG-TKFPVK--- 170
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP--------- 318
W APE+ +Y DV+++GI++ E+ G++P
Sbjct: 171 ----------------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
Query: 319 ---ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
+ L R + +I + C P++RP F+ L +
Sbjct: 215 VLKVSQGHRLYRPHL---------------ASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259
Query: 375 EGL 377
E L
Sbjct: 260 EPL 262
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 154 bits (390), Expect = 2e-43
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 58/248 (23%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
++ HHN+IR GV+ K + + ++TEY+ G L + L++ Q V R IA
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA 157
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM-AKVPRKAA 268
AGM YL +MN +HRDL ++N LV + V+DFGL+R++ P A T K+P +
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-- 215
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY--- 323
W APE ++ +++ DV+S+GIV+ E++ G P Y
Sbjct: 216 -----------------WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP----YWEL 254
Query: 324 --------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEV 369
LP D CP ++ C +RP F
Sbjct: 255 SNHEVMKAINDGFRLPTPMD---------------CPSAIYQLMMQCWQQERARRPKFAD 299
Query: 370 LEVWLEGL 377
+ L+ L
Sbjct: 300 IVSILDKL 307
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 153 bits (389), Expect = 3e-43
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ +L++LH ++++ GV Y + L LV EY+ G L++ LQ L + + ++
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 134
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP---RAPTTVMAKV 263
I GM YL S +HRDL ++N LV + V +ADFGLA+++ +
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE--PGQS 192
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADP 321
P W APE ++ + DV+S+G+VL E+
Sbjct: 193 PIF-------------------WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS--- 230
Query: 322 DYLPRSPDFGLDQTDFRNKFCA----------------SCPEPFVRIAFLCCDLNPDQRP 365
P + + + + +CP + LC +P RP
Sbjct: 231 -CSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 289
Query: 366 PFEVLEVWLEGL 377
F L L+ L
Sbjct: 290 SFSALGPQLDML 301
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 151 bits (385), Expect = 3e-43
Identities = 73/297 (24%), Positives = 113/297 (38%), Gaps = 77/297 (25%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ---NCGQVAV------------------LRSLHH 157
W L + G++G+ +VAV + L H
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH 73
Query: 158 HNVIRFIGVLYKDR-KLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTYL 215
N+++ +GV+ +++ L +VTEY+A G+L + L+ L + F+ D+ M YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 216 HSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARK 275
N +HRDL ++N LV ED V+DFGL + T K+P K
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVK--------- 179
Query: 276 KRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP------------ADP 321
W APE + +++ DV+S+GI+L EI GRVP +
Sbjct: 180 ----------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 229
Query: 322 DY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
Y + CP + C L+ RP F L LE +
Sbjct: 230 GYKMDAPDG---------------CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 153 bits (388), Expect = 3e-43
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 37/247 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ +L+SL H N++++ GV Y + L L+ EY+ G+L++ LQ + + + + +
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPR 265
I GM YL + IHRDL ++N LV + V + DFGL +++ Q + P
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 212
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-------GRVP 318
W APE +T ++ DV+S+G+VL E+
Sbjct: 213 F-------------------WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 253
Query: 319 ADPDYLPRSPDFGLDQTDFRNKF-------C-ASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ + CP+ I C + N +QRP F L
Sbjct: 254 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
Query: 371 EVWLEGL 377
+ ++ +
Sbjct: 314 ALRVDQI 320
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 152 bits (386), Expect = 5e-43
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+LR+L+H N++++ G+ +D + L+ E++ G+LKE L + Q++ +A I
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPRKA 267
GM YL S +HRDL ++N LV + V + DFGL + I P
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF- 194
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYLP 325
W APE + ++ DV+S+G+ L E++ + P L
Sbjct: 195 ------------------WYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALF 236
Query: 326 R----SPDFGLDQTDFRNKF-------C-ASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
+ T N C +CP+ ++ C + P R F+ L
Sbjct: 237 LKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296
Query: 374 LEGL 377
E L
Sbjct: 297 FEAL 300
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 156 bits (395), Expect = 5e-43
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 75/298 (25%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ----NCGQVAV-------------------LRSL 155
D W ++ L K+ G++GE +VAV +++L
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL 240
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTY 214
H +++ V+ K+ + ++TE++A G+L + L+ G P + ++F+ IA GM +
Sbjct: 241 QHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGAR 274
+ N IHRDL + N LV +ADFGLAR+I AK P K
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-AKFPIK-------- 350
Query: 275 KKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP----ADPD------ 322
W APE + + DV+S+GI+L EI+ GR+P ++P+
Sbjct: 351 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 323 --Y-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
Y +PR + CPE I C P++RP FE ++ L+
Sbjct: 400 RGYRMPRPEN---------------CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 151 bits (384), Expect = 7e-43
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 150 AVLRSLHHHNVIRFIGV-LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++ H NV+ +G+ L + +V Y+ G L+ +++ + F +
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV 137
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAPTTVMAKVPRK 266
A GM YL S +HRDL ++NC++ E TV VADFGLAR ++ AK+P K
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
WMA E + Q++ DV+S+G++L E++ G P Y
Sbjct: 198 -------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP----Y- 233
Query: 325 PRSPDFGLDQTDFRNKFC--------ASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
++ D CP+P + C + RP F L +
Sbjct: 234 -----PDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288
Query: 377 L 377
+
Sbjct: 289 I 289
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 150 bits (382), Expect = 1e-42
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 30/235 (12%)
Query: 150 AVLRSLHHHNVIRFIGV-LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++R L+H NV+ IG+ L + +++ Y+ G L + ++ P + ++F +
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQV 133
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP--RAPTTVMAKVPRK 266
A GM YL +HRDL ++NC++ E TV VADFGLAR I A++P K
Sbjct: 134 ARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
W A E + + DV+S+G++L E++ G P Y
Sbjct: 194 -------------------WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP----YR 230
Query: 325 PRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
P R CP+ ++ C + +P RP F VL +E +
Sbjct: 231 HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 151 bits (384), Expect = 2e-42
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 58/247 (23%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 69 YVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP K
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY---- 323
WMA E + + Y DV+SYG+ + E++ G P Y
Sbjct: 185 ----------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIP 224
Query: 324 -------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
LP+ P C I C ++ D RP F L
Sbjct: 225 ASEISSILEKGERLPQPPI---------------CTIDVYMIMRKCWMIDADSRPKFREL 269
Query: 371 EVWLEGL 377
+ +
Sbjct: 270 IIEFSKM 276
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 148 bits (376), Expect = 6e-42
Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 73/297 (24%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ----NCGQVAV-------------------LRSL 155
+W + L F KE G++G VA+ + +L
Sbjct: 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 76
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYL 215
H +++ GV K R + ++TEY+A G L L++ Q + +D+ M YL
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 216 HSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARK 275
S +HRDL ++NCLV + V V+DFGL+R + ++V +K P +
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVR--------- 186
Query: 276 KRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP------------ADP 321
W PE++ ++ D++++G+++ EI G++P
Sbjct: 187 ----------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
Query: 322 DY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
L R E I + C D+RP F++L + +
Sbjct: 237 GLRLYRPHL---------------ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 150 bits (381), Expect = 1e-41
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 150 AVLRSLHHHNVIRFIGV-LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++ H NV+ +G+ L + +V Y+ G L+ +++ + F +
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV 201
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQG--PRAPTTVMAKVPRK 266
A GM +L S +HRDL ++NC++ E TV VADFGLAR ++ AK+P K
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDYL 324
WMA E + Q++ DV+S+G++L E++ G P Y
Sbjct: 262 -------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP----YP 298
Query: 325 PRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
+ R CP+P + C + RP F L + +
Sbjct: 299 DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 148 bits (375), Expect = 1e-41
Identities = 77/298 (25%), Positives = 120/298 (40%), Gaps = 75/298 (25%)
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQ----NCGQVAV-------------------LRSL 155
D W ++ L + G++GE +VAV ++ L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-GQPLPWGQRVNFARDIAAGMTY 214
H ++R V+ ++ ++TEY+ G+L + L+ P G L + ++ A IA GM +
Sbjct: 66 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGAR 274
+ N IHRDL + N LV + + +ADFGLAR+I AK P K
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIK-------- 175
Query: 275 KKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP------------AD 320
W APE + + DV+S+GI+L EI+ GR+P +
Sbjct: 176 -----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 321 PDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
Y + R + CPE ++ LC P+ RP F+ L LE
Sbjct: 225 RGYRMVRPDN---------------CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 147 bits (374), Expect = 1e-41
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 50/243 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
V+ L H +++ GV + + LVTE++ G L + L+ + D+
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 114
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
GM YL +IHRDL ++NCLV E++ + V+DFG+ R + +T K P K
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVK--- 170
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP--------- 318
W +PE+ + Y DV+S+G+++ E+ G++P
Sbjct: 171 ----------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
Query: 319 ---ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
+ L + +I C P+ RP F L L
Sbjct: 215 VEDISTGFRLYKPRL---------------ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
Query: 375 EGL 377
+
Sbjct: 260 AEI 262
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 148 bits (376), Expect = 2e-41
Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 29/280 (10%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
V+ S+ + +V R +G+ + L+T+ + G L + +++ + +N+ IA
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
GM YL L+HRDL ++N LV+ + V + DFGLA+++ + KVP K
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY--LP 325
WMA E + + Y DV+SYG+ + E++ G P Y +P
Sbjct: 185 ----------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIP 224
Query: 326 RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDK 385
S + + R C I C ++ D RP F L + ++
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 284
Query: 386 PLPSDLEADIYQFATRKSASPL-TEPECTAPTPADGALRP 424
+ D + L E + AD L P
Sbjct: 285 VIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDADEYLIP 324
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 147 bits (374), Expect = 3e-41
Identities = 64/260 (24%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK--LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+ +LR+L+H ++I++ G L LV EY+ G+L++ L + Q + FA+
Sbjct: 84 IDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR--HSIGLAQLLLFAQ 141
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP---RAPTTVMAKV 263
I GM YLH+ + IHRDL ++N L+ D+ V + DFGLA+ + +G R
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED--GDS 199
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADP 321
P W APE + ++ DV+S+G+ L E++ P
Sbjct: 200 PVF-------------------WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240
Query: 322 DY----LPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEV 369
L + CP + C + RP FE
Sbjct: 241 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFEN 300
Query: 370 LEVWLEGLSMHLSVDKPLPS 389
L L+ ++H PS
Sbjct: 301 LIPILK--TVHEKYQGQAPS 318
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 145 bits (369), Expect = 7e-41
Identities = 53/250 (21%), Positives = 90/250 (36%), Gaps = 51/250 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++ L + ++R IGV + L LV E GG L + L + +P +
Sbjct: 61 AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 119
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPRKA 267
+ GM YL N +HRDL ++N L+ ++DFGL++ + K P K
Sbjct: 120 SMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK- 178
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP------- 318
W APE + +++ DV+SYG+ + E + G+ P
Sbjct: 179 ------------------WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220
Query: 319 -----ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEV 372
+ + P+ CP + C + RP F +E
Sbjct: 221 EVMAFIEQGKRMECPPE---------------CPPELYALMSDCWIYKWEDRPDFLTVEQ 265
Query: 373 WLEGLSMHLS 382
+ L+
Sbjct: 266 RMRACYYSLA 275
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 146 bits (370), Expect = 1e-40
Identities = 75/271 (27%), Positives = 113/271 (41%), Gaps = 50/271 (18%)
Query: 150 AVLRSLHHHNVIRFIGV------LYKDRKLNLVTEYIAGGTLKELLQ-----DPGQPLPW 198
A ++ H +V + +GV + ++ ++ G L L + LP
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTT 258
V F DIA GM YL S N IHRDL ++NC++ ED TV VADFGL+R I+ G
Sbjct: 137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 259 VMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GR 316
+K+P K W+A E + Y DV+++G+ + EI+ G+
Sbjct: 197 CASKLPVK-------------------WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 317 VPADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFE 368
P Y G++ + N C E + + C +P QRP F
Sbjct: 238 TP----Y------AGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFT 287
Query: 369 VLEVWLEGLSMHLSVDKPLPSDLEADIYQFA 399
L + LE + HLSV L +I +
Sbjct: 288 CLRMELENILGHLSVLSTSQDPLYINIERAH 318
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 146 bits (370), Expect = 2e-40
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 44/266 (16%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------DPGQPLPWGQ 200
+V++ + H+V+R +GV+ + + ++ E + G LK L+ P +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
+ A +IA GM YL++ +HRDL ++NC+V ED TV + DFG+ R I++
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP 318
+P + WM+PE + + DV+S+G+VL EI P
Sbjct: 200 GLLPVR-------------------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
Query: 319 ADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
Y S + +CP+ + +C NP RP F + ++
Sbjct: 241 ----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
Query: 377 L--------SMHLSVDKPLPSDLEAD 394
S + S + LP E D
Sbjct: 297 EMEPGFREVSFYYSEENKLPEPEELD 322
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 146 bits (370), Expect = 2e-40
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 58/247 (23%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+ SL H +++R +G+ L LVT+Y+ G+L + ++ L +N+ IA
Sbjct: 67 LAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 125
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
GM YL ++HR+L ++N L++ V VADFG+A ++ + AK P K
Sbjct: 126 KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK--- 182
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY---- 323
WMA E + +Y DV+SYG+ + E++ G P Y
Sbjct: 183 ----------------WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP----YAGLR 222
Query: 324 -------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
L + C + C ++ + RP F+ L
Sbjct: 223 LAEVPDLLEKGERLAQPQI---------------CTIDVYMVMVKCWMIDENIRPTFKEL 267
Query: 371 EVWLEGL 377
+
Sbjct: 268 ANEFTRM 274
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 145 bits (367), Expect = 2e-40
Identities = 66/267 (24%), Positives = 97/267 (36%), Gaps = 69/267 (25%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V + SL H N+IR GV+ + +VTE G+L + L+ G +A +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPRKA 267
A GM YL S IHRDL ++N L+ V + DFGL R + Q KVP
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA- 189
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY-- 323
W APE + + + D + +G+ L E+ G+ P +
Sbjct: 190 ------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP----WIG 227
Query: 324 ----------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
LPR D CP+ + C P+ RP F
Sbjct: 228 LNGSQILHKIDKEGERLPRPED---------------CPQDIYNVMVQCWAHKPEDRPTF 272
Query: 368 EVLEVWLEGLSMHLSVDKPLPSDLEAD 394
L +L P+D+ A+
Sbjct: 273 VALRDFLLEAQ---------PTDMRAE 290
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 144 bits (366), Expect = 2e-40
Identities = 51/246 (20%), Positives = 88/246 (35%), Gaps = 60/246 (24%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
V++ L + ++R IG+ + LV E G L + LQ + + + ++
Sbjct: 70 NVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVS 127
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPRKAA 268
GM YL N +HRDL ++N L+ ++DFGL++ + K P K
Sbjct: 128 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK-- 185
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY--- 323
W APE + ++ DV+S+G+++ E G+ P Y
Sbjct: 186 -----------------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP----YRGM 224
Query: 324 --------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEV 369
+ CP + LC + + RP F
Sbjct: 225 KGSEVTAMLEKGERMGCPAG---------------CPREMYDLMNLCWTYDVENRPGFAA 269
Query: 370 LEVWLE 375
+E+ L
Sbjct: 270 VELRLR 275
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 144 bits (366), Expect = 4e-40
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQ-----DPGQPLPWG 199
A ++ H NVIR +GV + K ++ ++ G L L + +P
Sbjct: 88 ACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ F DIA GM YL + N +HRDL ++NC++R+D TV VADFGL++ I+ G
Sbjct: 148 TLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRV 317
+AK+P K W+A E + + Y DV+++G+ + EI G
Sbjct: 208 IAKMPVK-------------------WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMT 248
Query: 318 PADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEV 369
P Y G+ + + C + I + C +P RP F V
Sbjct: 249 P----Y------PGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSV 298
Query: 370 LEVWLEGL 377
L + LE L
Sbjct: 299 LRLQLEKL 306
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 143 bits (364), Expect = 4e-40
Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 59/247 (23%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+R H ++++ IGV+ ++ ++ E G L+ LQ L + +A ++
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
+ YL S +HRD+ ++N LV + V + DFGL+R + + K+P K
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-GKLPIK--- 182
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY---- 323
WMAPE + + + DV+ +G+ + EI+ G P +
Sbjct: 183 ----------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVK 222
Query: 324 -------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
LP P+ CP + C +P +RP F L
Sbjct: 223 NNDVIGRIENGERLPMPPN---------------CPPTLYSLMTKCWAYDPSRRPRFTEL 267
Query: 371 EVWLEGL 377
+ L +
Sbjct: 268 KAQLSTI 274
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 143 bits (362), Expect = 1e-39
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 64/259 (24%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPG 193
+L +L H ++++F GV L +V EY+ G L + L+
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L Q ++ A IA+GM YL S + +HRDL ++NCLV + V + DFG++R ++
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 254 RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+P + WM PE + +++ DV+S+G++L EI
Sbjct: 188 YYRVGGHTMLPIR-------------------WMPPESIMYRKFTTESDVWSFGVILWEI 228
Query: 314 I--GRVP----ADPD---------YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCD 358
G+ P ++ + L R CP+ + C
Sbjct: 229 FTYGKQPWFQLSNTEVIECITQGRVLERPRV---------------CPKEVYDVMLGCWQ 273
Query: 359 LNPDQRPPFEVLEVWLEGL 377
P QR + + L L
Sbjct: 274 REPQQRLNIKEIYKILHAL 292
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 145 bits (368), Expect = 1e-39
Identities = 78/275 (28%), Positives = 110/275 (40%), Gaps = 49/275 (17%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQ 200
H N+I +G +D L ++ EY + G L+E LQ +P + L
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
V+ A +A GM YL S IHRDL ++N LV ED + +ADFGLAR IH T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP 318
++P K WMAPE + + Y DV+S+G++L EI G P
Sbjct: 253 GRLPVK-------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
Query: 319 ADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
Y + F L + R ++C + C P QRP F+ L L+
Sbjct: 294 ----YPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 377 LSMHLSVDKPLPSDLEADIYQFATRKSASPLTEPE 411
+ L S+ E Y T
Sbjct: 350 I-------VALTSNQEMGYYHHHHHHDYDIPTTEN 377
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 143 bits (363), Expect = 2e-39
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQ 200
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP 318
++P K WMAPE + + Y DV+S+G+++ EI G P
Sbjct: 219 GRLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 319 ADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
Y + F L + R A+C + C P QRP F+ L L+
Sbjct: 260 ----YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 377 L 377
+
Sbjct: 316 I 316
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 141 bits (359), Expect = 2e-39
Identities = 62/261 (23%), Positives = 98/261 (37%), Gaps = 72/261 (27%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPG 193
+ L H NV+ +GV+ KD+ L+++ Y + G L E L
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L V+ IAAGM YL S +++H+DL ++N LV + V ++D GL R ++
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 254 RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+ +P + WMAPE + ++ D++SYG+VL E+
Sbjct: 183 YYKLLGNSLLPIR-------------------WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
Query: 314 I--GRVPADPDY-----------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAF 354
G P Y LP D CP +
Sbjct: 224 FSYGLQP----YCGYSNQDVVEMIRNRQVLPCPDD---------------CPAWVYALMI 264
Query: 355 LCCDLNPDQRPPFEVLEVWLE 375
C + P +RP F+ + L
Sbjct: 265 ECWNEFPSRRPRFKDIHSRLR 285
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 141 bits (358), Expect = 3e-39
Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 59/247 (23%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
++++L H ++++ IG++ ++ ++ E G L L+ L V ++ I
Sbjct: 65 VIMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC 123
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
M YL S+N +HRD+ +N LV + V + DFGL+R I + + ++P K
Sbjct: 124 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIK--- 179
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPADPDY---- 323
WM+PE + + + DV+ + + + EI+ G+ P +
Sbjct: 180 ----------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLE 219
Query: 324 -------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
LP+ CP + C D +P RP F L
Sbjct: 220 NKDVIGVLEKGDRLPKPDL---------------CPPVLYTLMTRCWDYDPSDRPRFTEL 264
Query: 371 EVWLEGL 377
L +
Sbjct: 265 VCSLSDV 271
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 148 bits (376), Expect = 3e-39
Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 51/243 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+R H ++++ IGV+ ++ ++ E G L+ LQ L + +A ++
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
+ YL S +HRD+ ++N LV + V + DFGL+R + + K+P K
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-GKLPIK--- 557
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP--------- 318
WMAPE + + + DV+ +G+ + EI+ G P
Sbjct: 558 ----------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
Query: 319 ----ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
+ + LP P+ CP + C +P +RP F L+ L
Sbjct: 602 IGRIENGERLPMPPN---------------CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
Query: 375 EGL 377
+
Sbjct: 647 STI 649
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 142 bits (360), Expect = 4e-39
Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 49/264 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD------PGQPLPWGQRV 202
++ +H N++R IGV + ++ E +AGG LK L++ L +
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTV 259
+ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRV 317
A +P K WM PE + D +S+G++L EI G +
Sbjct: 204 CAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 244
Query: 318 PADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEV 369
P Y + + +CP P RI C P+ RP F +
Sbjct: 245 P----Y------PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAI 294
Query: 370 LEVWLEGLSMHLSV-DKPLPSDLE 392
+ +E + V + LP +
Sbjct: 295 ILERIEYCTQDPDVINTALPIEYG 318
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 141 bits (357), Expect = 5e-39
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 59/243 (24%)
Query: 149 VAVLRSLHHHNVIRFIG----VLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF 204
+L+ L H N++RF + + + LVTE + GTLK L+ + ++
Sbjct: 76 AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSW 134
Query: 205 ARDIAAGMTYLHSMN--LIHRDLNSQNCLV-REDKTVVVADFGLARIIHQGPRAPTTVMA 261
R I G+ +LH+ +IHRDL N + +V + D GLA +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---------- 184
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP-- 318
V+G P +MAPEM ++YDE+VDV+++G+ + E+ P
Sbjct: 185 -------------SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYS 230
Query: 319 -----------ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF 367
P S D + + + C N D+R
Sbjct: 231 ECQNAAQIYRRVTSGVKPASFDKVAIP-EVKE---------IIE---GCIRQNKDERYSI 277
Query: 368 EVL 370
+ L
Sbjct: 278 KDL 280
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 143 bits (362), Expect = 5e-39
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWGQ 200
H N+I +G +D L ++ EY + G L+E L+ P + + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
V+ +A GM YL S IHRDL ++N LV E+ + +ADFGLAR I+ T
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP 318
++P K WMAPE + + Y DV+S+G+++ EI G P
Sbjct: 265 GRLPVK-------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 319 ADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEG 376
Y + F L + R A+C + C P QRP F+ L L+
Sbjct: 306 ----YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
Query: 377 L 377
+
Sbjct: 362 I 362
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 142 bits (359), Expect = 1e-38
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 49/263 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------DPGQPLPWGQRV 202
++ +H N++R IGV + ++ E +AGG LK L+ L +
Sbjct: 125 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 184
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTV 259
+ ARDIA G YL + IHRD+ ++NCL+ + + DFG+AR I++
Sbjct: 185 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRV 317
A +P K WM PE + D +S+G++L EI G +
Sbjct: 245 CAMLPVK-------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 285
Query: 318 PADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFLCCDLNPDQRPPFEV 369
P Y + + +CP P RI C P+ RP F +
Sbjct: 286 P----Y------PSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAI 335
Query: 370 LEVWLEGLSMHLSV-DKPLPSDL 391
+ +E + V + LP +
Sbjct: 336 ILERIEYCTQDPDVINTALPIEY 358
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 140 bits (355), Expect = 2e-38
Identities = 64/244 (26%), Positives = 94/244 (38%), Gaps = 45/244 (18%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-----------------DPGQPLPW 198
+H N++ +G ++TEY G L L+ D L
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTT 258
++F+ +A GM +L S N IHRDL ++N L+ + + DFGLAR I
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 259 VMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GR 316
A++P K WMAPE + Y DV+SYGI L E+ G
Sbjct: 205 GNARLPVK-------------------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 317 VPADPDYLPRSPD---FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
P Y D + + + FR P I C D +P +RP F+ +
Sbjct: 246 SP----YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301
Query: 374 LEGL 377
+E
Sbjct: 302 IEKQ 305
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 145 bits (367), Expect = 3e-38
Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 51/244 (20%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
++ L + ++R IGV + L LV E GG L + L + +P ++
Sbjct: 388 QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 446
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA-PTTVMAKVPRKAA 268
GM YL N +HR+L ++N L+ ++DFGL++ + K P K
Sbjct: 447 MGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-- 504
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVP-------- 318
W APE + +++ DV+SYG+ + E + G+ P
Sbjct: 505 -----------------WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
Query: 319 ----ADPDY-LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVW 373
+ + P+ CP + C + RP F +E
Sbjct: 548 VMAFIEQGKRMECPPE---------------CPPELYALMSDCWIYKWEDRPDFLTVEQR 592
Query: 374 LEGL 377
+
Sbjct: 593 MRAC 596
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 138 bits (349), Expect = 6e-38
Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 40/239 (16%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIA 209
+++ L H +++ GV + LV E++ G+L L+ + ++ A+ +A
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLA 123
Query: 210 AGMTYLHSMNLIHRDLNSQNCLVREDKTVV--------VADFGLARIIHQGPRAPTTVMA 261
A M +L LIH ++ ++N L+ ++ ++D G++ + +
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP------KDIL 177
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII--GRVP 318
+ W+ PE + + + D +S+G L EI G P
Sbjct: 178 QERIP-------------------WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218
Query: 319 ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
L + R++ A + C D PD RP F + L L
Sbjct: 219 ----LSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 138 bits (351), Expect = 6e-38
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 50/255 (19%)
Query: 150 AVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------------------- 190
VL+ ++H +VI+ G +D L L+ EY G+L+ L+
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 191 ----DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLA 246
+ L G ++FA I+ GM YL M L+HRDL ++N LV E + + ++DFGL+
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 247 RIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSY 306
R +++ ++P K WMA E + Y DV+S+
Sbjct: 198 RDVYEEDSYVKRSQGRIPVK-------------------WMAIESLFDHIYTTQSDVWSF 238
Query: 307 GIVLCEII--GRVPADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPD 362
G++L EI+ G P Y P+ F L +T R + +C E R+ C PD
Sbjct: 239 GVLLWEIVTLGGNP----YPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPD 294
Query: 363 QRPPFEVLEVWLEGL 377
+RP F + LE +
Sbjct: 295 KRPVFADISKDLEKM 309
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 138 bits (351), Expect = 7e-38
Identities = 67/248 (27%), Positives = 97/248 (39%), Gaps = 46/248 (18%)
Query: 150 AVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ---------------DPG 193
VL L HH N+I +G L L EY G L + L+
Sbjct: 77 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L Q ++FA D+A GM YL IHRDL ++N LV E+ +ADFGL+R
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-- 194
Query: 254 RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
M ++P + WMA E + Y DV+SYG++L EI
Sbjct: 195 -YVKKTMGRLPVR-------------------WMAIESLNYSVYTTNSDVWSYGVLLWEI 234
Query: 314 I--GRVPADPDYLPRSPD--FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEV 369
+ G P Y + + +R + +C + + C P +RP F
Sbjct: 235 VSLGGTP----YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQ 290
Query: 370 LEVWLEGL 377
+ V L +
Sbjct: 291 ILVSLNRM 298
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 138 bits (351), Expect = 1e-37
Identities = 63/237 (26%), Positives = 94/237 (39%), Gaps = 35/237 (14%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-------------PGQPLPWGQRV 202
H N++ +G + ++TEY G L L+ +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+F+ +A GM +L S N IHRD+ ++N L+ + DFGLAR I A+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRVPAD 320
+P K WMAPE + Y DV+SYGI+L EI G P
Sbjct: 228 LPVK-------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY- 267
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGL 377
P L S + L + ++ A P+ I C L P RP F+ + +L+
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 138 bits (349), Expect = 1e-37
Identities = 67/272 (24%), Positives = 102/272 (37%), Gaps = 75/272 (27%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ--------------DPGQ 194
+L L H +++RF GV + R L +V EY+ G L L+
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
PL GQ + A +AAGM YL ++ +HRDL ++NCLV + V + DFG++R I+
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 255 APTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
+P + WM PE + +++ DV+S+G+VL EI
Sbjct: 214 YRVGGRTMLPIR-------------------WMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 315 --GRVPADPDY-----------------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFL 355
G+ P + L R CP I
Sbjct: 255 TYGKQP----WYQLSNTEAIDCITQGRELERPRA---------------CPPEVYAIMRG 295
Query: 356 CCDLNPDQRPPF----EVLEVWLEGLSMHLSV 383
C P QR L+ + ++L V
Sbjct: 296 CWQREPQQRHSIKDVHARLQALAQAPPVYLDV 327
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 138 bits (350), Expect = 2e-37
Identities = 66/262 (25%), Positives = 103/262 (39%), Gaps = 62/262 (23%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ------------------ 190
A++ + N+++ +GV + + L+ EY+A G L E L+
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 191 -----DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGL 245
PL +++ AR +AAGM YL +HRDL ++NCLV E+ V +ADFGL
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 246 ARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFS 305
+R I+ +P + WM PE + Y DV++
Sbjct: 221 SRNIYSADYYKADGNDAIPIR-------------------WMPPESIFYNRYTTESDVWA 261
Query: 306 YGIVLCEII--GRVPADPDYLPRSPDFGLDQTDFRNKFCA--------SCPEPFVRIAFL 355
YG+VL EI G P Y +G+ + +CP + L
Sbjct: 262 YGVVLWEIFSYGLQP----Y------YGMAHEEVIYYVRDGNILACPENCPLELYNLMRL 311
Query: 356 CCDLNPDQRPPFEVLEVWLEGL 377
C P RP F + L+ +
Sbjct: 312 CWSKLPADRPSFCSIHRILQRM 333
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 137 bits (347), Expect = 2e-37
Identities = 62/243 (25%), Positives = 92/243 (37%), Gaps = 44/243 (18%)
Query: 156 HHHNVIRFIGV-LYKDRKLNLVTEYIAGGTLKELLQ---------------DPGQPLPWG 199
HH NV+ +G L ++ E+ G L L+ L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I++ P
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII--GRV 317
A++P K WMAPE + + Y DV+S+G++L EI G
Sbjct: 209 DARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 318 PADPDY--LPRSPD-FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWL 374
P Y + + + R + + C P QRP F L L
Sbjct: 250 P----YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
Query: 375 EGL 377
L
Sbjct: 306 GNL 308
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 137 bits (347), Expect = 5e-37
Identities = 65/251 (25%), Positives = 91/251 (36%), Gaps = 54/251 (21%)
Query: 156 HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL----------------------QDPG 193
H N++ +G + L+ EY G L L ++
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGP 253
L + + FA +A GM +L + +HRDL ++N LV K V + DFGLAR I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 254 --RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
A++P K WMAPE + Y DV+SYGI+L
Sbjct: 227 NYVVRGN--ARLPVK-------------------WMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 312 EII--GRVPADPDYLPRSPD---FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPP 366
EI G P Y D + L Q F+ E I C + +RP
Sbjct: 266 EIFSLGVNP----YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321
Query: 367 FEVLEVWLEGL 377
F L +L
Sbjct: 322 FPNLTSFLGCQ 332
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 135 bits (341), Expect = 1e-36
Identities = 46/224 (20%), Positives = 75/224 (33%), Gaps = 38/224 (16%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+V + H +R + L L TE G +L++ + G LP Q + R
Sbjct: 106 EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLR 164
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
D + +LHS L+H D+ N + + DFGL +
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-------------- 210
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPR 326
G+P +MAPE++ G Y DVFS G+ + E+ +
Sbjct: 211 --------GAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMEL------- 254
Query: 327 SPDFGLDQTDFRNKFC-----ASCPEPFVRIAFLCCDLNPDQRP 365
P G R + A + + + +P R
Sbjct: 255 -PHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA 297
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 135 bits (341), Expect = 2e-36
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++++ +V+++ G +K+ L +V EY G++ ++++ + L + +
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST 134
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ YLH M IHRD+ + N L+ + +ADFG+A
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA---------------------G 173
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY----- 323
Q KR TV+G P+WMAPE++ Y+ D++S GI E+ P D
Sbjct: 174 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233
Query: 324 ---LPRSPDFGLDQ-----TDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+P +P + +F + FV+ C +P+QR
Sbjct: 234 IFMIPTNPPPTFRKPELWSDNFTD---------FVK---QCLVKSPEQRA 271
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 134 bits (339), Expect = 2e-36
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 149 VAVLRSLHHHNVIRFIGV-------------LYKDRKLNLVTEYIAGGTLKELLQDPGQP 195
V +L SL+H V+R+ + K L + EY GTL +L+
Sbjct: 53 VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112
Query: 196 LPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ R I ++Y+HS +IHRDL N + E + V + DFGLA+ +H+
Sbjct: 113 QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS--- 169
Query: 256 PTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQ-EYDETVDVFSYGIVLCEII 314
+ + + G+ + +G ++A E++ G Y+E +D++S GI+ E+I
Sbjct: 170 ----LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Query: 315 -GRVPADPDYLP----RSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
RS NK + +I L D +P++RP
Sbjct: 226 YPFSTGMERVNILKKLRSVSIEFPPDFDDNKM-----KVEKKIIRLLIDHDPNKRP 276
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 134 bits (338), Expect = 3e-36
Identities = 51/238 (21%), Positives = 82/238 (34%), Gaps = 27/238 (11%)
Query: 149 VAVLRSLHHHNVIRFIGV------------LYKDRKLNLVTEYIAGGTLKELL--QDPGQ 194
V L L H ++R+ L + + LK+ + + +
Sbjct: 54 VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 195 PLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
++ IA + +LHS L+HRDL N D V V DFGL + Q
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 255 APTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
T + A + VG +M+PE + G Y VD+FS G++L E++
Sbjct: 174 EQTVL---------TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
Query: 315 GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP-PFEVLE 371
P + F F P + +P +RP ++E
Sbjct: 225 --YPFSTQMERVRTLTDVRNLKFPPLFTQKYPC-EYVMVQDMLSPSPMERPEAINIIE 279
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 133 bits (338), Expect = 4e-36
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 24/167 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFA 205
+ +L+ L+H NVI++ +D +LN+V E G L +++ + +P +
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ + + ++HS ++HRD+ N + V + D GL R T A
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-----KTTAAH--- 194
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
++VG PY+M+PE + Y+ D++S G +L E
Sbjct: 195 -------------SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 135 bits (341), Expect = 4e-36
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARD 207
VAVL ++ H N++++ ++ L +V +Y GG L + + G Q +++
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
I + ++H ++HRD+ SQN + +D TV + DFG+AR+++ T +A+
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELAR----- 183
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPA 319
+G PY+++PE+ + Y+ D+++ G VL E+ A
Sbjct: 184 -----------ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 132 bits (334), Expect = 8e-36
Identities = 47/236 (19%), Positives = 85/236 (36%), Gaps = 49/236 (20%)
Query: 149 VAVLRSLHHHNVIRFIG----------------VLYKDRKLNLVTEYIAGGTLKELLQD- 191
V L L H N++ + G K + L + E+ GTL++ ++
Sbjct: 55 VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 114
Query: 192 PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQ 251
G+ L + I G+ Y+HS LI+RDL N + + K V + DFGL +
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
Query: 252 GPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
KR G +M+PE ++ Q+Y + VD+++ G++L
Sbjct: 175 D----------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212
Query: 312 EIIGRVPADPDYLPRSP--DFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
E++ ++ + + + P+ RP
Sbjct: 213 ELL--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRP 260
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 131 bits (331), Expect = 3e-35
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 46/228 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ VL V ++ G KD KL ++ EY+ GG+ +LL+ PL Q R+I
Sbjct: 71 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREI 128
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ YLHS IHRD+ + N L+ E V +ADFG+A
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA---------------------G 167
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY----- 323
Q + KR T VG P+WMAPE++ YD D++S GI E+ P +
Sbjct: 168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 227
Query: 324 ---LPRSPDFGLDQ---TDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+P++ L+ + FV C + P RP
Sbjct: 228 LFLIPKNNPPTLEGNYSKPLKE---------FVE---ACLNKEPSFRP 263
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 129 bits (327), Expect = 1e-34
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 23/170 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ V+R + N++ ++ +L +V EY+AGG+L +++ + + GQ R+
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCREC 125
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ +LHS +IHRD+ S N L+ D +V + DFG A
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC---------------------A 164
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
Q + KR T+VG PYWMAPE++T + Y VD++S GI+ E+I P
Sbjct: 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 129 bits (327), Expect = 1e-34
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 51/235 (21%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L + H +++ +G Y D KL ++ E+ GG + ++ + + L Q R +
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ +LHS +IHRDL + N L+ + + +ADFG+ +A
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV---------------------SA 165
Query: 269 QRRGARKKRYTVVGNPYWMAPE-----MMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY 323
+ +KR + +G PYWMAPE M YD D++S GI L E+ P +
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
Query: 324 --------LPRSPDFGLDQ-----TDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+ +S L +FR+ F++ + D NP+ RP
Sbjct: 226 NPMRVLLKIAKSDPPTLLTPSKWSVEFRD---------FLK---IALDKNPETRP 268
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 130 bits (328), Expect = 2e-34
Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ L ++ G + + +N+ E + GG+L +L++ G LP + + +
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQA 159
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPRKA 267
G+ YLH+ ++H D+ + N L+ D + + DFG A +
Sbjct: 160 LEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD--------------- 204
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP-------- 318
+ + G MAPE++ G+ D VD++S ++ ++ G P
Sbjct: 205 -GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Query: 319 -------ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
P P + P R
Sbjct: 264 LCLKIASEPPPIREIPPSCAPLTAQAIQE---------------GLRKEPVHRA 302
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 128 bits (324), Expect = 5e-34
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V ++R H NV+ +L ++ E++ GG L +++ L Q +
Sbjct: 93 VVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAV 150
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ YLH+ +IHRD+ S + L+ D V ++DFG A
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC---------------------A 189
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII 314
Q KR ++VG PYWMAPE+++ Y VD++S GI++ E++
Sbjct: 190 QISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 129 bits (327), Expect = 1e-33
Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 40/233 (17%)
Query: 149 VAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
V +LR H NVIR+ + + E TL+E ++ + + +
Sbjct: 68 VQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL-CAATLQEYVEQKDFAHLGLEPITLLQQ 126
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKT-----VVVADFGLARIIHQGPRAPTTVMAK 262
+G+ +LHS+N++HRDL N L+ +++DFGL + + G
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG---------- 176
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG---QEYDETVDVFSYGIVLCEIIGRVPA 319
R + +R V G W+APEM++ + TVD+FS G V +I
Sbjct: 177 --------RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG-- 226
Query: 320 DPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDL-------NPDQRP 365
P C P + +L +P +RP
Sbjct: 227 ---SHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP 276
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 126 bits (319), Expect = 6e-33
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARD 207
+ V + +H N++ + D +L +VT ++A G+ K+L+ + +
Sbjct: 77 LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ + Y+H M +HR + + + L+ D V ++ +
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR--------------SNLSMISHG 182
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMT--GQEYDETVDVFSYGIVLCEII-GRVP 318
++R V W++PE++ Q YD D++S GI CE+ G VP
Sbjct: 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 123 bits (311), Expect = 2e-32
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQ-------DPGQPLPWGQR 201
+ + HH N++ + +L LV + ++GG++ ++++ L
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
R++ G+ YLH IHRD+ + N L+ ED +V +ADFG++ + G
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN--- 180
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPEMMT-GQEYDETVDVFSYGIVLCEIIGRVPAD 320
K R T VG P WMAPE+M + YD D++S+GI E+
Sbjct: 181 -------------KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Query: 321 PDY--------LPRSP----DFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
Y ++ + G+ + K+ S + + LC +P++RP
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK-MIS---LCLQKDPEKRP 280
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 121 bits (307), Expect = 1e-31
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 47/252 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG--QPLPWGQRVNFAR 206
+ V+ H N++ +G L LV Y+ G+L + L PL W R A+
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
A G+ +LH + IHRD+ S N L+ E T ++DFGLAR + TVM
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA---SEKFAQTVMT----- 192
Query: 267 AAQRRGARKKRYT-VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVPADPDYL 324
+ +VG +MAPE + G+ ++ D++S+G+VL EII G D
Sbjct: 193 ------------SRIVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPAVDE--- 236
Query: 325 PRSPDFGL---------DQTDFR-------NKFCASCPEPFVRIAFLCCDLNPDQRPPF- 367
L ++ N ++ E +A C ++RP
Sbjct: 237 -HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 368 EVLEVWLEGLSM 379
+V ++ L+ ++
Sbjct: 296 KVQQL-LQEMTA 306
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 121 bits (305), Expect = 1e-31
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 57/238 (23%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV--NFAR 206
+A+ + L H N+++++G ++ + + E + GG+L LL+ PL ++ + +
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPR 265
I G+ YLH ++HRD+ N L+ V+ ++DFG ++ +
Sbjct: 130 QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--------------- 174
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEM--MTGQEYDETVDVFSYGIVLCEII-GRVP---- 318
G T G +MAPE+ + Y + D++S G + E+ G+ P
Sbjct: 175 ------GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
Query: 319 ----------ADPDYLPRSPD-FGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
P P+ + F K C + +PD+R
Sbjct: 229 GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK---------------CFEPDPDKRA 271
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 120 bits (304), Expect = 1e-31
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 125 KDGLLFC-KE-DYNGKYGEACQNCGQ-VAVLRSLHHHNVIRFIG--VLYKDRKLNLVTEY 179
DG + KE DY Q V +LR L H N++R+ + + L +V EY
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 180 IAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGMTYLHSMNL-----IHRDLNSQNCL 231
GG L ++ Q L + + + H + +HRDL N
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 232 VREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEM 291
+ + V + DFGLARI++ T AK T VG PY+M+PE
Sbjct: 149 LDGKQNVKLGDFGLARILNH-----DTSFAK----------------TFVGTPYYMSPEQ 187
Query: 292 MTGQEYDETVDVFSYGIVLCEIIGRVPA 319
M Y+E D++S G +L E+ +P
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPP 215
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 121 bits (306), Expect = 3e-31
Identities = 63/228 (27%), Positives = 88/228 (38%), Gaps = 45/228 (19%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V L+ L H N I++ G ++ LV EY G +LL+ +PL +
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHGA 163
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ YLHS N+IHRD+ + N L+ E V + DFG A+
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS---------------------AS 202
Query: 269 QRRGARKKRYTVVGNPYWMAPE---MMTGQEYDETVDVFSYGIVLCEIIGRVPADPDY-- 323
+ VG PYWMAPE M +YD VDV+S GI E+ R P +
Sbjct: 203 I----MAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
Query: 324 ------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+ ++ L + F FV C P RP
Sbjct: 259 MSALYHIAQNESPALQSGHWSEYFRN-----FVD---SCLQKIPQDRP 298
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 120 bits (303), Expect = 5e-31
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 50/238 (21%)
Query: 149 VAVLRSL-HHHNVIRFIGVLYK------DRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQ 200
+ +L+ HH N+ + G K D +L LV E+ G++ +L+++ G L
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
R+I G+++LH +IHRD+ QN L+ E+ V + DFG+
Sbjct: 131 IAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV--------------- 175
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE-----YDETVDVFSYGIVLCEIIG 315
+AQ +R T +G PYWMAPE++ E YD D++S GI E+
Sbjct: 176 ------SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229
Query: 316 RVPADPDY--------LPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
P D +PR+P L + KF + F+ C N QRP
Sbjct: 230 GAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQS-----FIE---SCLVKNHSQRP 279
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 118 bits (298), Expect = 2e-30
Identities = 47/232 (20%), Positives = 81/232 (34%), Gaps = 15/232 (6%)
Query: 143 CQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL--QDPGQPLPWGQ 200
++ + N + + L + + LK+ + + + G
Sbjct: 106 DAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
++ IA + +LHS L+HRDL N D V V DFGL + Q T +
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL- 224
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPAD 320
A VG +M+PE + G Y VD+FS G++L E++
Sbjct: 225 --------TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL--YSFS 274
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP-PFEVLE 371
+ F F P+ + +P +RP +++E
Sbjct: 275 TQMERVRIITDVRNLKFPLLFTQKYPQ-EHMMVQDMLSPSPTERPEATDIIE 325
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 117 bits (294), Expect = 4e-30
Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 27/229 (11%)
Query: 148 QVAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVN 203
+V L H +V+R+ +D + + EY GG+L + + + + +
Sbjct: 60 EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 119
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ G+ Y+HSM+L+H D+ N + + + KV
Sbjct: 120 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT--------SIPNAASEEGDEDDWASNKV 171
Query: 264 PRKAAQRRGARK--KRYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVPAD 320
K + G+ ++A E++ + D+F+ + + G P
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL- 230
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPE----PFVRIAFLCCDLNPDQRP 365
P G + R P+ F + + +P++RP
Sbjct: 231 -------PRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRP 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 121 bits (305), Expect = 6e-30
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQP--LPWGQ 200
+ +++ L+H NV+ V +KL L EY GG L++ L L G
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPT 257
DI++ + YLH +IHRDL +N ++ + + D G A+ + QG
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG----- 177
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GR 316
+ VG ++APE++ ++Y TVD +S+G + E I G
Sbjct: 178 -----------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220
Query: 317 VPADPDYLP 325
P P++ P
Sbjct: 221 RPFLPNWQP 229
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 116 bits (292), Expect = 1e-29
Identities = 47/235 (20%), Positives = 86/235 (36%), Gaps = 24/235 (10%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDR----KLNLVTEYIAGGTLKELLQ---DPGQPLPWGQR 201
+ R +H N++R + ++R + L+ + GTL ++ D G L Q
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
+ I G+ +H+ HRDL N L+ ++ V+ D G A
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ------------A 184
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEY---DETVDVFSYGIVLCEII-GRV 317
+ + +++ + + APE+ + Q + DE DV+S G VL ++ G
Sbjct: 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
Query: 318 PADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPP-FEVLE 371
P D + Q ++ ++P QRP +L
Sbjct: 245 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 116 bits (292), Expect = 1e-29
Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 39/196 (19%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN--LVTEYIAGGTLKELLQDPGQPLPWGQRV--NF 204
VL+ L+H N+++ + + + L+ E+ G+L +L++P +
Sbjct: 58 FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGLARIIHQGPRAPTTVM 260
RD+ GM +L ++HR++ N + + DFG AR +
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-------- 169
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG--------QEYDETVDVFSYGIVLCE 312
++ ++ G ++ P+M ++Y TVD++S G+
Sbjct: 170 --------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 313 II-GRVPADPDYLPRS 327
G +P P PR
Sbjct: 216 AATGSLPFRPFEGPRR 231
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 117 bits (295), Expect = 3e-29
Identities = 55/253 (21%), Positives = 93/253 (36%), Gaps = 59/253 (23%)
Query: 149 VAVLR-SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV----- 202
+ +L S H NVIR+ DR L + E L++L++ +
Sbjct: 59 IKLLTESDDHPNVIRYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 203 -NFARDIAAGMTYLHSMNLIHRDLNSQNCLV-------------REDKTVVVADFGLARI 248
+ R IA+G+ +LHS+ +IHRDL QN LV E+ ++++DFGL +
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 249 IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG-------QEYDETV 301
+ G + T + G W APE++ + ++
Sbjct: 178 LDSGQSSFRTNLN-----------------NPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 302 DVFSYGIVLCEIIGRVPADPDYLPRSPDFGLDQTDFRNKFCASCPE--PFVRIAFLCCDL 359
D+FS G V I+ + P + + R F + + DL
Sbjct: 221 DIFSMGCVFYYILSKG-----KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDL 275
Query: 360 -------NPDQRP 365
+P +RP
Sbjct: 276 ISQMIDHDPLKRP 288
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 116 bits (293), Expect = 3e-29
Identities = 43/258 (16%), Positives = 85/258 (32%), Gaps = 47/258 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLN--LVTEYIAGGTLKELLQDPGQPLPWGQRV--NF 204
VL+ L+H N+++ + + + L+ E+ G+L +L++P +
Sbjct: 58 FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 205 ARDIAAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGLARIIHQGPRAPTTVM 260
RD+ GM +L ++HR++ N + + DFG AR +
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-------- 169
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG--------QEYDETVDVFSYGIVLCE 312
++ ++ G ++ P+M ++Y TVD++S G+
Sbjct: 170 --------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 313 II-GRVPADPDYLPRSPDFGLDQT---DFRNKFCASCPEPFVRIAFLCCDLNPDQRPPF- 367
G +P P PR + + I +
Sbjct: 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGL 275
Query: 368 -EVLEVWLEGLSMHLSVD 384
+L L + L D
Sbjct: 276 QVLLTPVLANI---LEAD 290
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 115 bits (290), Expect = 4e-29
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 28/193 (14%)
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARII 249
L + ++ +A GM +L S IHRDL ++N L+ E V + DFGLAR I
Sbjct: 184 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 250 HQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIV 309
++ P A++P K WMAPE + + Y DV+S+G++
Sbjct: 244 YKDPDYVRKGDARLPLK-------------------WMAPETIFDRVYTIQSDVWSFGVL 284
Query: 310 LCEII--GRVPADPDY--LPRSPDF-GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
L EI G P Y + +F + R + + C P QR
Sbjct: 285 LWEIFSLGASP----YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 340
Query: 365 PPFEVLEVWLEGL 377
P F L L L
Sbjct: 341 PTFSELVEHLGNL 353
Score = 38.4 bits (89), Expect = 0.003
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 6/100 (6%)
Query: 156 HHHNVIRFIGV-LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTY 214
HH NV+ +G L ++ E+ G L L+ + V + A
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFVPYKTKGARFRQG 138
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPR 254
+ I DL + + ++ + F + +
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 114 bits (287), Expect = 4e-29
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 154 SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMT 213
L H N++ I V +D LV EYI G TL E ++ G PL +NF I G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIK 125
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGA 273
+ H M ++HRD+ QN L+ +KT+ + DFG+A+ + + T
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN--------------- 170
Query: 274 RKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
V+G + +PE G+ DE D++S GIVL E++ G P
Sbjct: 171 -----HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 112 bits (283), Expect = 1e-28
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V + L H +++ + LV E G + L++ +P + +F I
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
GM YLHS ++HRDL N L+ + + +ADFGL A
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL---------------------AT 160
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
Q + +K YT+ G P +++PE+ T + DV+S G + +IGR P
Sbjct: 161 QLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 112 bits (283), Expect = 3e-28
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 49/241 (20%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQRVNFA 205
+ L H +++ IG + ++ L+ +Y+ G LK L P + W QR+
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP----TTVMA 261
A G+ YLH+ +IHRD+ S N L+ E+ + DFG+++ G +TV
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK---GTELDQTHLSTV-- 200
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII-GRVPA 319
V G ++ PE + G+ +++ DV+S+G+VL E++ R
Sbjct: 201 ------------------VKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVLCARSAI 241
Query: 320 DPDYLPRSPD-------FGLDQTDF--------RNKFCASCPEPFVRIAFLCCDLNPDQR 364
LPR + +K F A C L+ + R
Sbjct: 242 VQS-LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR 300
Query: 365 P 365
P
Sbjct: 301 P 301
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 112 bits (282), Expect = 5e-28
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 49/254 (19%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ---PLPWGQRVNFA 205
V ++ H N++R G + LV Y+A G++ L++ + PL W +R A
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 206 RDIAAGMTYLH---SMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
A G+ YLH +IHRD+ + N L+ E+ VV DFGLA+++ TT
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT---- 193
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII-GRVPAD 320
V G +APE + TG+ E DVF YG++L E+I G+ D
Sbjct: 194 ----------------AVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFD 236
Query: 321 PDYLPRSPDFGL-----------------DQTDFRNKFCASCPEPFVRIAFLCCDLNPDQ 363
L D L D D + + E +++A LC +P +
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDV-DLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 364 RPPF-EVLEVWLEG 376
RP EV+ LEG
Sbjct: 296 RPKMSEVVR-MLEG 308
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 111 bits (280), Expect = 1e-27
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 26/223 (11%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
VL + ++ F G Y D ++++ E++ GG+L ++L+ G +P + +
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIK 142
Query: 211 GMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
G+TYL ++HRD+ N LV + + DFG++ + MA
Sbjct: 143 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMAN------- 188
Query: 270 RRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI-IGRVPADPDYLPRSP 328
+ VG +M+PE + G Y D++S G+ L E+ +GR P P
Sbjct: 189 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 239
Query: 329 DFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLE 371
Q + P R + FE+L+
Sbjct: 240 LMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLD 282
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 110 bits (277), Expect = 1e-27
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
+V EY+ G TL++++ G P+ + + D + + H +IHRD+ N ++
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 235 DKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG 294
V V DFG+AR I + T V+G +++PE G
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTA------------------AVIGTAQYLSPEQARG 193
Query: 295 QEYDETVDVFSYGIVLCEII-GRVP 318
D DV+S G VL E++ G P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 109 bits (275), Expect = 2e-27
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V + L H N++R G + ++ L+ EY GT+ LQ + + ++
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITEL 118
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
A ++Y HS +IHRD+ +N L+ + +ADFG + P
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--------------VHAP---- 160
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+R + G ++ PEM+ G+ +DE VD++S G++ E ++G+ P
Sbjct: 161 -----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 110 bits (278), Expect = 2e-27
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 149 VAVLRSLHHHN--VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+A L L H+ +IR D+ + +V E L L+ + +R ++ +
Sbjct: 58 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWK 115
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
++ + +H ++H DL N L+ D + + DFG+A +
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD-------------- 160
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQ-----------EYDETVDVFSYGIVLCEII- 314
+ + VG +M PE + + DV+S G +L +
Sbjct: 161 -----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215
Query: 315 GRVP 318
G+ P
Sbjct: 216 GKTP 219
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein
ISL-1; protein-protein complex, LIM domain, Zn finger,
activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Length = 169
Score = 106 bits (266), Expect = 2e-27
Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 21/120 (17%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQMM--SGPVMVVGDHKFHPECFK 88
CS C V L F + ++CK+D+ ++G C C + + V D +H CF
Sbjct: 36 CSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFA 95
Query: 89 CTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
C C + G+ + Y +D L CK DY G
Sbjct: 96 CVVCKRQLATGDEF-------------------YLMEDSRLVCKADYETAKQGGSGGSGG 136
Score = 64.5 bits (157), Expect = 2e-12
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 23/88 (26%)
Query: 63 CQNCGQMMSGP-VMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C Q + ++ D +H +C KC+ C L
Sbjct: 9 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHV----------------------PLAER 46
Query: 122 YFEKDGLLFCKEDYNGKYGEACQNCGQV 149
F + ++CK+D+ ++G C C
Sbjct: 47 CFSRGESVYCKDDFFKRFGTKCAACQLG 74
Score = 64.1 bits (156), Expect = 2e-12
Identities = 16/66 (24%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 31 CSACDVML---DNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECF 87
C C L D +Y +D L CK DY G G MV + H
Sbjct: 96 CVVCKRQLATGDEFYLMEDSRLVCKADYETAKQGGSGGSGGSGGGTPMVAASPERHDGGL 155
Query: 88 KCTSCS 93
+
Sbjct: 156 QANPVE 161
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 111 bits (278), Expect = 4e-27
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 149 VAVLRSLHHHN--VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+A L L H+ +IR D+ + +V E L L+ + +R ++ +
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWK 162
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
++ + +H ++H DL N L+ D + + DFG+A +
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD-------------- 207
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQ-----------EYDETVDVFSYGIVLCEII- 314
+ + VG +M PE + + DV+S G +L +
Sbjct: 208 -----TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 315 GRVP 318
G+ P
Sbjct: 263 GKTP 266
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 109 bits (274), Expect = 4e-27
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 149 VAVLRSLHHHN--VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+A L L H+ +IR D+ + +V E L L+ + +R ++ +
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWK 134
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
++ + +H ++H DL N L+ D + + DFG+A +
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD-------------- 179
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQ-----------EYDETVDVFSYGIVLCEII- 314
+ + VG +M PE + + DV+S G +L +
Sbjct: 180 -----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 315 GRVP 318
G+ P
Sbjct: 235 GKTP 238
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 109 bits (274), Expect = 4e-27
Identities = 40/172 (23%), Positives = 59/172 (34%), Gaps = 34/172 (19%)
Query: 154 SLHHHNVI------RFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
L +V+ G LY + I G L +L+ G PL + V R
Sbjct: 90 RLQEPHVVPIHDFGEIDGQLY------VDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQ 142
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
I + + H+ HRD+ +N LV D + DFG+A
Sbjct: 143 IGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG--------- 193
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
VG Y+MAPE + D+++ VL E + G P
Sbjct: 194 -----------NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP 234
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 109 bits (273), Expect = 1e-26
Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 34/175 (19%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD----PGQPLPWGQRVNFAR 206
L+ H ++F LV E + GTL + P + +P G ++FA
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVR-----------EDKTVVVADFGLARIIHQGPRA 255
+ + +H +IH D+ N ++ + + D G + + P+
Sbjct: 180 RMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG 239
Query: 256 PTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ EM++ + ++ +D F +
Sbjct: 240 TIF-------------------TAKCETSGFQCVEMLSNKPWNYQIDYFGVAATV 275
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 109 bits (273), Expect = 2e-26
Identities = 29/169 (17%), Positives = 70/169 (41%), Gaps = 28/169 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++++ LHH +I ++ L+ E+++GG L + + + + +N+ R
Sbjct: 99 ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA 158
Query: 209 AAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
G+ ++H +++H D+ +N C ++ +V + DFGLA ++
Sbjct: 159 CEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-------------- 204
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+ + APE++ + D+++ G ++L
Sbjct: 205 --------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 245
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 107 bits (269), Expect = 4e-26
Identities = 29/186 (15%), Positives = 67/186 (36%), Gaps = 34/186 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-------QPLPWGQR 201
+ ++ + + + G++ ++ ++ EY+ ++ + + +P
Sbjct: 94 LQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVI 153
Query: 202 VNFARDIAAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
+ + +Y+H+ N+ HRD+ N L+ ++ V ++DFG + +
Sbjct: 154 KCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-------- 205
Query: 261 AKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRV 317
K G +M PE + + VD++S GI L + V
Sbjct: 206 ---------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
Query: 318 PADPDY 323
P
Sbjct: 251 PFSLKI 256
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 106 bits (267), Expect = 4e-26
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF---- 204
+AVL+ + H N++ + LV + ++GG L + + +R +
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL---------ERGVYTEKD 107
Query: 205 ----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPT 257
+ + + + YLH ++HRDL +N L E+ +++ DFGL+++ G
Sbjct: 108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----- 162
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLC 311
+M T G P ++APE++ + Y + VD +S G++
Sbjct: 163 -IM-----------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY 198
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 109 bits (275), Expect = 4e-26
Identities = 51/289 (17%), Positives = 100/289 (34%), Gaps = 63/289 (21%)
Query: 154 SLHHHNVIR-----------FIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV 202
+ H ++++ V Y +V EY+ G +LK GQ LP + +
Sbjct: 135 EVVHPSIVQIFNFVEHTDRHGDPVGY------IVMEYVGGQSLKRSK---GQKLPVAEAI 185
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ +I ++YLHS+ L++ DL +N ++ E+ + + D G I+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS----------- 233
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVPADP 321
G + G P + APE++ T D+++ G L + +
Sbjct: 234 --------FGY------LYGTPGFQAPEIVRTGPTVAT-DIYTVGRTLAALTLDLPTRNG 278
Query: 322 DYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPP------FEVLEVWLE 375
Y+ P+ D + + + R+ D +P QR ++ V E
Sbjct: 279 RYVDGLPE---DDPVLKT------YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329
Query: 376 GLSMHLSVDKPLPSDLEADIYQFATRKSASPLTEPECTAPTPADGALRP 424
++ V +P S + + T+ A+
Sbjct: 330 VVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTAN 378
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 104 bits (263), Expect = 8e-26
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ + L H N++R + +++ L+ E+ G L + LQ G + F ++
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEEL 123
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
A + Y H +IHRD+ +N L+ + +ADFG +
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---------------- 167
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEII-GRVP 318
+R T+ G ++ PEM+ G+ +DE VD++ G++ E + G P
Sbjct: 168 -------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 105 bits (264), Expect = 1e-25
Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++L H N++ +L ++ E+I+G + E + L + V++ +
Sbjct: 52 ISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQV 111
Query: 209 AAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
+ +LHS N+ H D+ +N R T+ + +FG AR + G
Sbjct: 112 CEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-------------- 157
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+ P + APE+ D++S G ++L
Sbjct: 158 --------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 104 bits (263), Expect = 1e-25
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++ RSL H +V+ F G + + +V E +L EL + L + + R I
Sbjct: 66 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQI 124
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G YLH +IHRDL N + ED V + DFGLA +
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---------------- 168
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLP 325
+++ + G P ++APE+++ + + VDV+S G ++ ++G+ P + L
Sbjct: 169 -----GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 221
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 105 bits (265), Expect = 1e-25
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 54/182 (29%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR------- 201
+ VL L H N+I+ + +++LV E + GG EL R
Sbjct: 99 IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG---ELF----------DRIVEKGYY 145
Query: 202 -----VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGP 253
+ + I + YLH ++HRDL +N L D + +ADFGL++I+
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204
Query: 254 RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IV 309
TV G P + APE++ G Y VD++S G I+
Sbjct: 205 ---------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYIL 243
Query: 310 LC 311
LC
Sbjct: 244 LC 245
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 105 bits (263), Expect = 2e-25
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++ RSL H +V+ F G + + +V E +L EL + R + R I
Sbjct: 92 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR-YYLRQI 150
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G YLH +IHRDL N + ED V + DFGLA +
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---------------- 194
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLP 325
+++ + G P ++APE+++ + + VDV+S G ++ ++G+ P + L
Sbjct: 195 -----GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 247
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 107 bits (269), Expect = 2e-25
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 27/165 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++L+SL H N+I+ V + LVTE+ GG L E + + + N + I
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQI 155
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+G+ YLH N++HRD+ +N L+ + + DFGL+ +
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD------------- 202
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
K +G Y++APE++ + Y+E DV+S G+++
Sbjct: 203 ---------YKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIM 237
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 105 bits (264), Expect = 3e-25
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 28/169 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++V+ L H N+I+ + LV EY+ GG L + + D L + F + I
Sbjct: 137 ISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI 196
Query: 209 AAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
G+ ++H M ++H DL +N C+ R+ K + + DFGLAR
Sbjct: 197 CEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-------------- 242
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+K G P ++APE++ D++S G ++L
Sbjct: 243 --------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 103 bits (260), Expect = 3e-25
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 29/183 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLY--KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
+A+L+ L H NV++ + VL + L +V E + G + E+ +PL Q + +
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQ 144
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
D+ G+ YLH +IHRD+ N LV ED + +ADFG++
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD------------- 191
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTG--QEYD-ETVDVFSYGIVL-CEIIGRVPADPD 322
VG P +MAPE ++ + + + +DV++ G+ L C + G+ P +
Sbjct: 192 --------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
Query: 323 YLP 325
+
Sbjct: 244 RIM 246
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 104 bits (262), Expect = 3e-25
Identities = 43/205 (20%), Positives = 73/205 (35%), Gaps = 60/205 (29%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV------ 202
V +++ LHH N+ R V ++ + LV E GG L + L +
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 203 ---------------------------------NFARDIAAGMTYLHSMNLIHRDLNSQN 229
N R I + + YLH+ + HRD+ +N
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 230 CLV--REDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
L + + + DFGL++ ++ M T G PY++
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT-----------------TKAGTPYFV 241
Query: 288 APEMM--TGQEYDETVDVFSYGIVL 310
APE++ T + Y D +S G++L
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLL 266
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 106 bits (266), Expect = 4e-25
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
V +L+ L H N+++ ++D+ LV E GG L + + + R
Sbjct: 77 VQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQ 134
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ +G+TY+H ++HRDL +N L+ +D + + DFGL+
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS------------ 182
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
KK +G Y++APE++ G YDE DV+S G++L
Sbjct: 183 ----------KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 106 bits (266), Expect = 5e-25
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
VAVL+ L H N+++ ++D++ LV E GG L + + + +
Sbjct: 87 VAVLKLLDHPNIMKLYDF-FEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQ 144
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ +G+TYLH N++HRDL +N L+ +D + + DFGL+ +
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ------------ 192
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
KK +G Y++APE++ + YDE DV+S G++L
Sbjct: 193 ----------KKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVIL 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 102 bits (257), Expect = 1e-24
Identities = 53/290 (18%), Positives = 103/290 (35%), Gaps = 60/290 (20%)
Query: 149 VAVLRSL-HHHNVIRFIGVLYKDRKLN--------LVTEYIAGGTLKELLQ-DPGQPLPW 198
V ++ L H N+++F ++ + L+TE G ++ L + + PL
Sbjct: 76 VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 199 GQRVNFARDIAAGMTYLHSMN--LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAP 256
+ + ++H +IHRDL +N L+ T+ + DFG A I P
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS 195
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEM---MTGQEYDETVDVFSYGIVLCEI 313
+ AQRR ++ T P + PE+ + E D+++ G +L +
Sbjct: 196 WS---------AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 314 I-GRVPAD--------------PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCD 358
+ P + P + + F +R
Sbjct: 247 CFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVF----------------HSLIRA---MLQ 287
Query: 359 LNPDQRPP-FEVLE-VWLEGLSMHLSVDKPLPSDLEADIYQFATRKSASP 406
+NP++R EV+ + + +++ P+ LE + + S P
Sbjct: 288 VNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGP 337
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 101 bits (254), Expect = 1e-24
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 37/172 (21%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQR------ 201
+ VL+SL H N+I+ V ++D + +V E GG ELL+ G+
Sbjct: 71 IEVLKSLDHPNIIKIFEV-FEDYHNMYIVMETCEGG---ELLERIVSAQARGKALSEGYV 126
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTT 258
+ + + Y HS +++H+DL +N L + + + DFGLA +
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD------ 180
Query: 259 VMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ G +MAPE+ + D++S G+V+
Sbjct: 181 ----------------EHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVM 215
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 104 bits (261), Expect = 2e-24
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
V +L+ L H N+++ + +D +V E GG L + + + +
Sbjct: 72 VELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQ 129
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ +G+TY+H N++HRDL +N L+ +D + + DFGL+ Q
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN------------ 177
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
K +G Y++APE++ G YDE DV+S G++L
Sbjct: 178 ----------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 103 bits (259), Expect = 2e-24
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 30/168 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L+ L+H +I+ + +V E + GG L + + + L + +
Sbjct: 191 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQM 248
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ YLH +IHRDL +N L+ ED + + DFG ++I+ + ++M
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-----SLM----- 298
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVL 310
T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 299 ------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 101 bits (253), Expect = 2e-24
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V +LR + H N+I + + L+ E ++GG L + L + L + F + I
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQI 117
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLV----REDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
G+ YLHS + H DL +N ++ + + + DFG+A I G
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG------------ 165
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ + G P ++APE++ + D++S G++
Sbjct: 166 ----------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 104 bits (261), Expect = 2e-24
Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 28/169 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ + L H ++ D ++ ++ E+++GG L E + D + + V + R +
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 264
Query: 209 AAGMTYLHSMNLIHRDLNSQN--CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
G+ ++H N +H DL +N + + + DFGL +
Sbjct: 265 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-------------- 310
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+ G + APE+ G+ D++S G I+L
Sbjct: 311 --------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 101 bits (254), Expect = 3e-24
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 54/180 (30%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRV------ 202
+ +L+ L+H +I+ + +V E + GG EL +V
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG---ELFD----------KVVGNKRL 111
Query: 203 ------NFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGP 253
+ + + YLH +IHRDL +N L+ ED + + DFG ++I+ +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET- 170
Query: 254 RAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE---YDETVDVFSYGIVL 310
++M T+ G P ++APE++ Y+ VD +S G++L
Sbjct: 171 ----SLM-----------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 100 bits (251), Expect = 3e-24
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ + + L+H NV++F G + L EY +GG L + ++ +P F +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQL 114
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------- 160
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLPR 326
+ + G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD------ 209
Query: 327 SPDFGLDQTDFRNKFCA--SCPEPFVRIAFLCCDL-------NPDQR 364
++ + P+ +I L NP R
Sbjct: 210 --QPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSAR 253
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 100 bits (252), Expect = 3e-24
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 42/173 (24%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF---- 204
+ R L H N++R + ++ LV + + GG EL +D R +
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG---ELFED------IVAREFYSEAD 106
Query: 205 ----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPT 257
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----- 161
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ + G P +++PE++ Y + VD+++ G++L
Sbjct: 162 -----------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 101 bits (253), Expect = 3e-24
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ + + L+H NV++F G + L EY +GG L + ++ +P F +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQL 114
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
AG+ YLH + + HRD+ +N L+ E + ++DFGLA + R
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------- 160
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLPR 326
+ + G ++APE++ +E+ E VDV+S GIVL ++ G +P D
Sbjct: 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD------ 209
Query: 327 SPDFGLDQTDFRNKFCA--SCPEPFVRIAFLCCDL-------NPDQR 364
++ + P+ +I L NP R
Sbjct: 210 --QPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSAR 253
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 100 bits (251), Expect = 3e-24
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+ +++SL H N+IR ++D + LV E GG L E + +D
Sbjct: 57 IEIMKSLDHPNIIRLYET-FEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKD 114
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
+ + + Y H +N+ HRDL +N L D + + DFGLA G
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG------------ 162
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
K T VG PY+++P+++ G Y D +S G ++LC
Sbjct: 163 ----------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLC 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 100 bits (251), Expect = 3e-24
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 46/236 (19%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--ELLQDPGQPLPWGQRVNFARDI 208
+R++ + F G L+++ + + E + K + + D GQ +P A I
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 209 AAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ +LHS +++IHRD+ N L+ V + DFG++ + +AK
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-------VDDVAK----- 166
Query: 268 AQRRGARKKRYTVVGNPYWMAPE----MMTGQEYDETVDVFSYGIVLCEI-IGRVPADPD 322
G +MAPE + + Y D++S GI + E+ I R P D
Sbjct: 167 ----------DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216
Query: 323 --------YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVL 370
+ P L F +F F C N +RP + L
Sbjct: 217 GTPFQQLKQVVEEPSPQLPADKFSAEFVD-----FTS---QCLKKNSKERPTYPEL 264
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 101 bits (253), Expect = 4e-24
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V++L+ + H NVI V + L+ E +AGG L + L + L + F + I
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQI 123
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
G+ YLHS+ + H DL +N ++ + + DFGLA I G
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------------ 171
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ + G P ++APE++ + D++S G++
Sbjct: 172 ----------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 101 bits (254), Expect = 5e-24
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 46/178 (25%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF---- 204
+ R L H N++R + ++ LV + + GG L E + R +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---------AREFYSEAD 129
Query: 205 ----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPT 257
+ I + Y HS ++HR+L +N L+ + V +ADFGLA ++
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----- 184
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+ + G P +++PE++ Y + VD+++ G I+L
Sbjct: 185 -----------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 100 bits (252), Expect = 5e-24
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V++LR + HHNVI V + L+ E ++GG L + L L + +F + I
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQI 124
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
G+ YLH+ + H DL +N ++ + + DFGLA I G
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG------------ 172
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ + G P ++APE++ + D++S G++
Sbjct: 173 ----------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 99 bits (250), Expect = 5e-24
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 47/178 (26%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF---- 204
V +L+ L H N+++ +L +V E GG L + + +R F
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------KRKRFSEHD 122
Query: 205 ----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPT 257
+ + +G+TY+H N++HRDL +N L+ +D + + DFGL+ Q
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN----- 177
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
K +G Y++APE++ G YDE DV+S G I+L
Sbjct: 178 -----------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS 217
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 101 bits (253), Expect = 7e-24
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V++LR + H N+I V + L+ E ++GG L + L L + +F + I
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQI 124
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVR----EDKTVVVADFGLARIIHQGPRAPTTVMAKVP 264
G+ YLH+ + H DL +N ++ + + DFGLA I G
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG------------ 172
Query: 265 RKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ + G P ++APE++ + D++S G++
Sbjct: 173 ----------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 101 bits (254), Expect = 1e-23
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 45/178 (25%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF---- 204
+ R L H N++R + ++ L+ + + GG EL +D R +
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG---ELFED------IVAREYYSEAD 111
Query: 205 ----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPT 257
+ I + + H M ++HR+L +N L+ + V +ADFGLA +
Sbjct: 112 ASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV----EGEQ 167
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLC 311
+ G P +++PE++ Y + VD+++ G I+L
Sbjct: 168 QAW-----------------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 99.6 bits (249), Expect = 1e-23
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 27/167 (16%)
Query: 149 VAVLRSL-HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKE-LLQDPGQPLPWGQRVNFAR 206
+AVL VI V ++ L+ EY AGG + L + + + + +
Sbjct: 79 IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
I G+ YLH N++H DL QN L+ + + DFG++R I
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA----------- 187
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
+ ++G P ++APE++ D+++ GI+
Sbjct: 188 -----------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 99.3 bits (248), Expect = 3e-23
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTL-KELLQDPGQPLPWGQRV--NFA 205
++ L H +++ + D L +V E++ G L E+++ + + V ++
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAPTTVMAK 262
R I + Y H N+IHRD+ L+ V + FG+A + + V
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE----SGLVA-- 190
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
VG P++MAPE++ + Y + VDV+ G++L
Sbjct: 191 ---------------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 98.5 bits (246), Expect = 3e-23
Identities = 40/202 (19%), Positives = 79/202 (39%), Gaps = 51/202 (25%)
Query: 149 VAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF--- 204
+ L+ H N+++ V + LV E + GG EL + ++ +F
Sbjct: 56 ITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG---ELFER------IKKKKHFSET 106
Query: 205 -----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAP 256
R + + ++++H + ++HRDL +N L ++ + + DFG AR+
Sbjct: 107 EASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK----PPD 162
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----IVLCE 312
+ T ++ APE++ YDE+ D++S G +L
Sbjct: 163 NQPL-----------------KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS- 204
Query: 313 IIGRVP--ADPDYLPRSPDFGL 332
G+VP + L + +
Sbjct: 205 --GQVPFQSHDRSLTCTSAVEI 224
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3;
intramolecular (fusion) protein-protein complex, protein
binding/transcription complex; NMR {Mus musculus}
Length = 182
Score = 95.0 bits (236), Expect = 4e-23
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ--MMSGPVMVVGDHKFHPECFK 88
CS C V L F + ++CK+D+ ++G C C + V D +H CF
Sbjct: 90 CSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFA 149
Query: 89 CTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDY 135
C C + G+ + Y +D L CK DY
Sbjct: 150 CVVCKRQLATGDEF-------------------YLMEDSRLVCKADY 177
Score = 74.2 bits (182), Expect = 8e-16
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 23/119 (19%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSG-PVMVVGDHKFHPECFKC 89
N ++ G C C Q + ++ D +H +C KC
Sbjct: 31 LENTQFDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKC 90
Query: 90 TSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
+ C L F + ++CK+D+ ++G C C
Sbjct: 91 SDCHV----------------------PLAERCFSRGESVYCKDDFFKRFGTKCAACQL 127
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 99.7 bits (248), Expect = 4e-23
Identities = 43/303 (14%), Positives = 86/303 (28%), Gaps = 50/303 (16%)
Query: 141 EACQNCGQVAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYI----AGGTLKELLQ------ 190
+A + + + + I V +R + +++ + L+ +
Sbjct: 143 QAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHS 202
Query: 191 DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIH 250
+ L R+ + + LH L+H L + ++ + V + F
Sbjct: 203 STHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 262
Query: 251 QGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE-----YDETVDVFS 305
+P P A M+ + D ++
Sbjct: 263 ASAVSPIG--------------------RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302
Query: 306 YGIVLCEII-GRVPADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQR 364
G+ + I +P G + FR+ C + P+P + + R
Sbjct: 303 LGLAIYWIWCADLP-----NTDDAALGGSEWIFRS--CKNIPQPVRALLEGFLRYPKEDR 355
Query: 365 P-PFEVLEV-WLEGLSMHLSVDKPLPSDLEADIYQFATRKSASPLTEPECTAPTPADGAL 422
P + +E E L LS PL TR+ +P + A A+
Sbjct: 356 LLPLQAMETPEYEQLRTELSAALPLYQTDGE-----PTREGGAPPSGTSQPDEAGAAEAV 410
Query: 423 RPI 425
I
Sbjct: 411 TAI 413
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 98.1 bits (245), Expect = 5e-23
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 25/179 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V +++ L+H N+++ V+ ++ L L+ EY +GG + + L G + + + R I
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQI 123
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ + Y H ++HRDL ++N L+ D + +ADFG + G
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---------------- 167
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVL-CEIIGRVPADPDYLP 325
K G P + APE+ G++YD VDV+S G++L + G +P D L
Sbjct: 168 ------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 97.6 bits (244), Expect = 6e-23
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L+ L H N++ + V + R+L+LV EY T+ L + +P +
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQT 111
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ + H N IHRD+ +N L+ + + + DFG AR++
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL------------------- 152
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
Y V Y +PE++ G +Y VDV++ G V E++ VP
Sbjct: 153 ---TGPSDYYDDEVATRWYR-SPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 97.1 bits (242), Expect = 1e-22
Identities = 51/231 (22%), Positives = 86/231 (37%), Gaps = 46/231 (19%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLK--ELLQDPGQPLPWGQRVNFARDI 208
+R++ + F G L+++ + + E + K + + D GQ +P A I
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 209 AAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ +LHS +++IHRD+ N L+ V + DFG++ + +AK
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-------VDSVAKT---- 211
Query: 268 AQRRGARKKRYTVVGNPYWMAPE----MMTGQEYDETVDVFSYGIVLCEI-IGRVPADPD 322
G +MAPE + + Y D++S GI + E+ I R P D
Sbjct: 212 -----------IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
Query: 323 --------YLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+ P L F +F F C N +RP
Sbjct: 261 GTPFQQLKQVVEEPSPQLPADKFSAEFVD-----FTS---QCLKKNSKERP 303
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 96.9 bits (242), Expect = 1e-22
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L+ L H N++ + V K ++ LV E++ T+ + L+ L + + I
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQI 133
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ + HS N+IHRD+ +N LV + V + DFG AR +
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL------------------- 174
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
A + Y V Y APE++ G +Y + VDV++ G ++ E+ P
Sbjct: 175 ---AAPGEVYDDEVATRWYR-APELLVGDVKYGKAVDVWAIGCLVTEMFMGEP 223
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 97.4 bits (242), Expect = 1e-22
Identities = 28/257 (10%), Positives = 57/257 (22%), Gaps = 46/257 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLN--LVTEYIAG--GTLKELLQDP---GQPLPWGQRVN 203
+ + N L+ + L L
Sbjct: 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHI 198
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ L S L+H N + D +++ D
Sbjct: 199 LTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW---------------- 242
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE--YDETVDVFSYGIVLCEII-GRVP-- 318
+ G R + E + + ++ + G+ + + +P
Sbjct: 243 ------KVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294
Query: 319 ------ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP-PFEVLE 371
P G D F + C P+ + + + +R P E +E
Sbjct: 295 LVTPGIKGSWKRPSLRVPGTDSLAFGS--CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352
Query: 372 -VWLEGLSMHLSVDKPL 387
L +S
Sbjct: 353 TPEFLQLQNEISSSLST 369
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 95.4 bits (238), Expect = 2e-22
Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 46/177 (25%)
Query: 149 VAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF--- 204
V +LR + H N+I+ + LV + + G L + L ++V
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---------EKVTLSEK 124
Query: 205 -----ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R + + LH +N++HRDL +N L+ +D + + DFG + + G
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG------- 177
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE------YDETVDVFSYGIVL 310
+K V G P ++APE++ Y + VD++S G+++
Sbjct: 178 ---------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 95.9 bits (239), Expect = 3e-22
Identities = 50/235 (21%), Positives = 80/235 (34%), Gaps = 55/235 (23%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAA 210
VL+S +++ G + + + E + K + G P+P I
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQG-PIPERILGKMTVAIVK 135
Query: 211 GMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQ 269
+ YL +IHRD+ N L+ E + + DFG + ++ A+
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG--------------ISGRLVDDKAK 181
Query: 270 RRGARKKRYTVVGNPYWMAPE-----MMTGQEYDETVDVFSYGIVLCEI-IGRVPADPDY 323
G +MAPE T +YD DV+S GI L E+ G+ P Y
Sbjct: 182 D--------RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP----Y 229
Query: 324 LPRSPDFGL-------------DQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
DF + F F + FV+ C + +RP
Sbjct: 230 KNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQS-----FVK---DCLTKDHRKRP 276
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 96.3 bits (240), Expect = 4e-22
Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 46/177 (25%)
Query: 149 VAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF--- 204
+LR + H ++I I + LV + + G L + L ++V
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT---------EKVALSEK 200
Query: 205 -----ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
R + +++LH+ N++HRDL +N L+ ++ + ++DFG + + G
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG------- 253
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE------YDETVDVFSYGIVL 310
+K + G P ++APE++ Y + VD+++ G++L
Sbjct: 254 ---------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 95.5 bits (238), Expect = 5e-22
Identities = 48/235 (20%), Positives = 83/235 (35%), Gaps = 50/235 (21%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGG---TLKELLQDPGQPLPWGQRVNFARD 207
V+RS +++F G L+++ + E ++ K + +P
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 208 IAAGMTYLHS-MNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
+ +L + +IHRD+ N L+ + + DFG+
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI--------------------- 172
Query: 267 AAQRRGARKKRYTVVGNPYWMAPE----MMTGQEYDETVDVFSYGIVLCEI-IGRVP-AD 320
+ Q + K G +MAPE + Q YD DV+S GI L E+ GR P
Sbjct: 173 SGQLVDSIAKTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 321 PD-------YLPRSPDFGL---DQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP 365
+ + + L ++ +F F FV LC + +RP
Sbjct: 232 WNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN-----FVN---LCLTKDESKRP 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 95.5 bits (238), Expect = 5e-22
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 46/178 (25%)
Query: 149 VAVLRSLHHH-NVIRFIGV----LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 203
V +++ + V + R L ++ E + GG L +Q+ G
Sbjct: 72 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD-------QA 124
Query: 204 F--------ARDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQG 252
F RDI + +LHS N+ HRD+ +N L +D + + DFG A+ Q
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 253 PRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
T PY++APE++ ++YD++ D++S G+++
Sbjct: 185 AL-----------------------QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene,
transcription, developmental protein; 2.40A {Homo
sapiens} PDB: 2xjz_A
Length = 131
Score = 89.8 bits (223), Expect = 6e-22
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 31 CSACDVMLDN---WYFEKDGLLFCKEDYNGKYG--EACQNCGQMMSGP--VMVVGDHKFH 83
C C L + K G C+ DY +G C +C + + M V D +H
Sbjct: 32 CDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAYEMTMRVKDKVYH 91
Query: 84 PECFKCTSCSCCIGDGESYALVERSILCSAC 114
ECFKC +C G+ Y L+ I+C
Sbjct: 92 LECFKCAACQKHFCVGDRYLLINSDIVCEQD 122
Score = 60.1 bits (146), Expect = 2e-11
Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 22/90 (24%)
Query: 63 CQNCGQMMSG-PVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C Q + + D +H +C C C C +G+
Sbjct: 5 CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR-------------------R 45
Query: 122 YFEKDGLLFCKEDYNGKYG--EACQNCGQV 149
+ K G C+ DY +G C +C +
Sbjct: 46 LYYKLGRKLCRRDYLRLFGQDGLCASCDKR 75
Score = 27.4 bits (61), Expect = 4.7
Identities = 6/27 (22%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 31 CSACDVMLDN--WYFEKDGLLFCKEDY 55
C+AC Y + + C++D
Sbjct: 97 CAACQKHFCVGDRYLLINSDIVCEQDI 123
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 95.1 bits (237), Expect = 7e-22
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 45/176 (25%)
Query: 149 VAVL-RSLHHHNVIRFIGVLYKDRK-LNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-- 204
+ +L R H N+I V Y D K + +VTE + GG ELL ++ F
Sbjct: 66 IEILLRYGQHPNIITLKDV-YDDGKYVYVVTELMKGG---ELLDK------ILRQKFFSE 115
Query: 205 ------ARDIAAGMTYLHSMNLIHRDLNSQNCLVREDK----TVVVADFGLARIIHQGPR 254
I + YLH+ ++HRDL N L ++ ++ + DFG A+ + R
Sbjct: 116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL----R 171
Query: 255 APTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVL 310
A ++ T ++APE++ Q YD D++S G++L
Sbjct: 172 AENGLL-----------------MTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 94.2 bits (235), Expect = 1e-21
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V++L+ L H N++ +++ ++ L LV EY+ LK+ L D G + F +
Sbjct: 51 VSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQL 109
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ Y H ++HRDL QN L+ E + +ADFGLAR
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAK------------------- 150
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
K Y VV Y P+++ G +Y +D++ G + E+ P
Sbjct: 151 ---SIPTKTYDNEVVTLWYR-PPDILLGSTDYSTQIDMWGVGCIFYEMATGRP 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 92.7 bits (231), Expect = 2e-21
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 25/180 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ L+ H ++I+ V+ +V EY++GG L + + G + + + I
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQI 120
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ + Y H ++HRDL +N L+ +ADFGL+ ++ G
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------------- 164
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLPR 326
+ T G+P + APE+++G+ Y VD++S G++L ++ G +P D +++P
Sbjct: 165 ------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT 218
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 93.5 bits (233), Expect = 2e-21
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 47/191 (24%)
Query: 149 VAVLRSLHHH-NVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF--- 204
V +L H NV+ I ++ + LV E + GG++ + +R +F
Sbjct: 61 VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH---------KRRHFNEL 111
Query: 205 -----ARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARIIHQGPRAP 256
+D+A+ + +LH+ + HRDL +N L + V + DF L I
Sbjct: 112 EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 257 TTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE-----YDETVDVFSYG---- 307
+ + T G+ +MAPE++ YD+ D++S G
Sbjct: 172 PI--------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217
Query: 308 IVLCEIIGRVP 318
I+L G P
Sbjct: 218 ILLS---GYPP 225
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 94.3 bits (234), Expect = 2e-21
Identities = 38/260 (14%), Positives = 72/260 (27%), Gaps = 57/260 (21%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEY-IAGGTLKELLQD------PGQPLPWGQRVN 203
+++ +IR L+ Y L+ + + L R+
Sbjct: 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQ 210
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
+ + LH L+H L + ++ + V + F
Sbjct: 211 LTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV---------------- 254
Query: 264 PRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQE-----------YDETVDVFSYGIVLCE 312
R G R + + PE+ + + D ++ G+V+
Sbjct: 255 ------RDG---ARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305
Query: 313 II-GRVP--ADPDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRP-PFE 368
I +P D F + C + P+P + + R P +
Sbjct: 306 IWCADLPITKDAALGGSEWIF---------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356
Query: 369 VLE-VWLEGLSMHLSVDKPL 387
+E E L LS PL
Sbjct: 357 AMETPEYEQLRTELSAALPL 376
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 92.6 bits (231), Expect = 2e-21
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++L+ L H N+++ V++ ++L LV E++ LK+LL L +F +
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQL 109
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ Y H ++HRDL QN L+ + + +ADFGLAR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF------------------- 150
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
G ++YT +V Y AP+++ G ++Y T+D++S G + E++ P
Sbjct: 151 ---GIPVRKYTHEIVTLWYR-APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 92.2 bits (230), Expect = 4e-21
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+++L+ LHH N++ I V++ +R L LV E++ LK++L + L Q + +
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKIYLYQL 128
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ + H ++HRDL QN L+ D + +ADFGLAR
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF------------------- 169
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
G + YT VV Y AP+++ G ++Y +VD++S G + E+I P
Sbjct: 170 ---GIPVRSYTHEVVTLWYR-APDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 92.1 bits (229), Expect = 8e-21
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTE-YIAGGTLKELLQDPGQPLPWGQRVNFARD 207
+A+L + H N+I+ + + LV E + +G L + + L R
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQ 138
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ + + YL ++IHRD+ +N ++ ED T+ + DFG A + +G
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK-------------- 184
Query: 268 AQRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVL 310
YT G + APE++ G Y ++++S G+ L
Sbjct: 185 --------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 92.9 bits (231), Expect = 8e-21
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 52/190 (27%)
Query: 149 VAVLRSLHHH-NVIRFIGV----LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVN 203
V + +++R + V + L +V E + GG L +QD G
Sbjct: 105 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-------QA 157
Query: 204 F--------ARDIAAGMTYLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLARIIHQG 252
F + I + YLHS+N+ HRD+ +N L R + + + DFG A+
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217
Query: 253 PRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYG----I 308
T PY++APE++ ++YD++ D++S G I
Sbjct: 218 ----------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255
Query: 309 VLCEIIGRVP 318
+LC G P
Sbjct: 256 LLC---GYPP 262
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 91.1 bits (227), Expect = 2e-20
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L+ L H N+I + ++LV +++ L+ +++D L +
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ YLH ++HRDL N L+ E+ + +ADFGLA+ P +A
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG------------SPNRA- 168
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
YT VV Y APE++ G + Y VD+++ G +L E++ RVP
Sbjct: 169 ---------YTHQVVTRWYR-APELLFGARMYGVGVDMWAVGCILAELLLRVP 211
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 89.6 bits (223), Expect = 2e-20
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++ LR L H ++I+ V+ ++ +V EY AG L + + + + F + I
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD-KMSEQEARRFFQQI 121
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ + Y H ++HRDL +N L+ E V +ADFGL+ I+ G
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---------------- 165
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLPR 326
T G+P + APE+++G+ Y VDV+S G++L ++ R+P D + +P
Sbjct: 166 ------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 89.9 bits (224), Expect = 2e-20
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ +L+ L H N++R VL+ D+KL LV E+ LK+ L +F +
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
G+ + HS N++HRDL QN L+ + + +A+FGLAR
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF------------------- 151
Query: 269 QRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEII 314
G + Y+ VV Y P+++ G + Y ++D++S G + E+
Sbjct: 152 ---GIPVRCYSAEVVTLWYR-PPDVLFGAKLYSTSIDMWSAGCIFAELA 196
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 90.9 bits (226), Expect = 2e-20
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 27/182 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ RSL H N++RF V+ L ++ EY +GG L E + + G+ + F + +
Sbjct: 67 IINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQL 125
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKT--VVVADFGLARIIHQGPRAPTTVMAKVPRK 266
+G++Y HSM + HRDL +N L+ + + DFG ++ + +T
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-------- 177
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVL-CEIIGRVPADPDYL 324
VG P ++APE++ QEYD + DV+S G+ L ++G P +
Sbjct: 178 --------------VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
Query: 325 PR 326
PR
Sbjct: 224 PR 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 89.2 bits (222), Expect = 5e-20
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYK--DRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFA 205
+ +LR L H NVI+ + VLY +K+ +V EY G ++E+L P + P Q +
Sbjct: 57 IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYF 115
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ YLHS ++H+D+ N L+ T+ ++ G+A +H
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF------------- 162
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQE-YD-ETVDVFSYGIVLCEII-GRVPADPD 322
+ T G+P + PE+ G + + VD++S G+ L I G P + D
Sbjct: 163 ----AADDTCR--TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
Query: 323 YLPR 326
+ +
Sbjct: 217 NIYK 220
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 89.6 bits (223), Expect = 5e-20
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
++ L+ L H ++I+ V+ + +V EY AGG L + + + + + F + I
Sbjct: 60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKK-RMTEDEGRRFFQQI 117
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ Y H ++HRDL +N L+ ++ V +ADFGL+ I+ G
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---------------- 161
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPADPDYLP 325
T G+P + APE++ G+ Y VDV+S GIVL ++ GR+P D +++P
Sbjct: 162 ------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 88.7 bits (221), Expect = 5e-20
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 28/174 (16%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARD 207
+++L+ L+H N+++ + V++ + KL LV E++ LK+ + +P ++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ G+ + HS ++HRDL QN L+ + + +ADFGLAR
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF------------------ 153
Query: 268 AQRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
G + YT VV Y APE++ G + Y VD++S G + E++ R
Sbjct: 154 ----GVPVRTYTHEVVTLWYR-APEILLGAKYYSTAVDIWSLGCIFAEMVTRRA 202
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 90.3 bits (224), Expect = 9e-20
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 152 LRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGT-LKELLQDPGQPLPWGQRVNFA 205
L L+H +V++ + ++ K +L +V E + K+L + P L
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTP-VYLTELHIKTLL 162
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
++ G+ Y+HS ++HRDL NCLV +D +V V DFGLAR + + +
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 266 KAAQRRGARKKRYTV------VGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+ V ++ APE ++ + Y E +DV+S G + E++ +
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
Query: 319 AD-PDYLPRSPDF 330
+ + R P F
Sbjct: 283 ENVAYHADRGPLF 295
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding
protein 1; B-tandem zipper, protein binding; 1.30A {Mus
musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB:
2dfy_X 2xjz_I 2xjy_B
Length = 188
Score = 85.8 bits (212), Expect = 9e-20
Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 27/125 (21%)
Query: 31 CSACDVMLDNW---YFEKDGLLFCKEDYNGKYGEA--CQNCGQMMSG--PVMVVGDHKFH 83
CS+C L + + K G++ C+ DY +G + C CGQ + VM + +H
Sbjct: 35 CSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYH 94
Query: 84 PECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+CF C++C + G+ + +G LFC+ D
Sbjct: 95 LKCFTCSTCRNRLVPGDR--------------------FHYINGSLFCEHDRPTALINGH 134
Query: 144 QNCGQ 148
N G
Sbjct: 135 LNSGG 139
Score = 57.7 bits (139), Expect = 5e-10
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 22/93 (23%)
Query: 60 GEACQNCGQMMSG-PVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVML 118
+ C CG ++ ++ D +H C KC+SC +GD +
Sbjct: 5 WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGT----------------- 47
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEA--CQNCGQV 149
+ K G++ C+ DY +G + C CGQ
Sbjct: 48 --SSYTKSGMILCRNDYIRLFGNSGACSACGQS 78
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 89.4 bits (222), Expect = 1e-19
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN-----LVTEYIAGGT-LKELLQDPGQPLPWGQRVNFA 205
L L +IR ++ D L +V E + LK+L + P L
Sbjct: 79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA--DSDLKKLFKTP-IFLTEEHIKTIL 135
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
++ G ++H +IHRDL NCL+ +D +V V DFGLAR I+ +
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 266 KAAQRRGARKKRYT--VVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEII-GRVPADP 321
+ KK+ T VV Y APE ++ + Y +++D++S G + E++
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWY-RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
Query: 322 DYLPRSPDF 330
D R P F
Sbjct: 255 DPTNRFPLF 263
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 89.5 bits (222), Expect = 2e-19
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 31/182 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+ L+ H ++I+ V+ + +V EY++GG L + + G L + + I
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQI 125
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+G+ Y H ++HRDL +N L+ +ADFGL+ ++ G
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---------------- 169
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVL----CEIIGRVPADPDY 323
+ T G+P + APE+++G+ Y VD++S G++L C G +P D D+
Sbjct: 170 ------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC---GTLPFDDDH 220
Query: 324 LP 325
+P
Sbjct: 221 VP 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 88.6 bits (220), Expect = 2e-19
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 152 LRSLHHHNVIRFIGVLY------KDRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRV 202
+R L H N++R Y + LNLV +Y+ T+ + + Q LP
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVK 159
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMA 261
+ + + Y+HS + HRD+ QN L+ D V+ + DFG A+ + +G P
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNV--- 214
Query: 262 KVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
Y Y+ APE++ G +Y ++DV+S G VL E++ P
Sbjct: 215 ---------------SYICSR--YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 88.2 bits (219), Expect = 3e-19
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 54/214 (25%)
Query: 136 NGKYGEACQ----NCGQVAV----------------LRSLHHHNVIRFIGVLY------K 169
NG +G Q +VA+ +R + H NV+ Y
Sbjct: 50 NGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109
Query: 170 DRKLNLVTEYIAGGTLKELLQD---PGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLN 226
+ LNLV EY+ T+ + Q +P + + + Y+HS+ + HRD+
Sbjct: 110 EVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK 168
Query: 227 SQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPY 285
QN L+ V+ + DFG A+I+ G P Y Y
Sbjct: 169 PQNLLLDPPSGVLKLIDFGSAKILIAGE--PNV------------------SYICSR--Y 206
Query: 286 WMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
+ APE++ G Y +D++S G V+ E++ P
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP 240
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 86.9 bits (216), Expect = 3e-19
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 63/232 (27%)
Query: 121 WYFEKDGLLF-CKEDY-------NGKYGEAC-----QNCGQVAV---------------- 151
W +E + + ++DY GKY E N +V V
Sbjct: 23 WDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK 82
Query: 152 -LRSLHHH-NVIRFIGVLY--KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARD 207
L +L N+I ++ R LV E++ K+L Q L + +
Sbjct: 83 ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYE 138
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLV-REDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
I + Y HSM ++HRD+ N ++ E + + + D+GLA H G
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-------------- 184
Query: 267 AAQRRGARKKRYTV-VGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGR 316
+ Y V V + Y+ PE ++ Q YD ++D++S G +L +I R
Sbjct: 185 ---------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 87.2 bits (216), Expect = 1e-18
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 151 VLRSLHHHNVIRFIGVLY----KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-A 205
+L ++ RF+ L L LV + GG LK + GQ R F A
Sbjct: 237 ILEKVNS----RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+I G+ LH +++RDL +N L+ + + ++D GLA + +G
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---------- 342
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
VG +MAPE++ + Y + D ++ G +L E I G+ P
Sbjct: 343 ------------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 85.4 bits (212), Expect = 1e-18
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 33/182 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDR--------KLNLVTEYIAGGTLKELLQDPGQPLPWGQ 200
+ +L+ L H NV+ I + + LV ++ L LL + +
Sbjct: 67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSE 125
Query: 201 RVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVM 260
+ + G+ Y+H ++HRD+ + N L+ D + +ADFGLAR +
Sbjct: 126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ---- 181
Query: 261 AKVPRKAAQRRGARKKRYT--VVGNPYWM-APEMMTGQE-YDETVDVFSYGIVLCEIIGR 316
RYT VV W PE++ G+ Y +D++ G ++ E+ R
Sbjct: 182 --------------PNRYTNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
Query: 317 VP 318
P
Sbjct: 226 SP 227
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 81
Score = 78.7 bits (194), Expect = 2e-18
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 49 LFCKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERS 108
+DY GK+GE C C +M+GP MV G+ K+HPECF C SC I DG++YALV+ +
Sbjct: 4 GSSGKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHA 63
Query: 109 -ILCSAC 114
+ C C
Sbjct: 64 TLYCGKC 70
Score = 29.0 bits (65), Expect = 0.76
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 129 LFCKEDYNGKYGEACQNCGQ 148
+DY GK+GE C C
Sbjct: 4 GSSGKDYWGKFGEFCHGCSL 23
Score = 28.2 bits (63), Expect = 1.2
Identities = 7/37 (18%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 31 CSACDVML---DNWYFEKDGLLFCKEDYNGKYGEACQ 64
C +C V++ D + + L+C + +N
Sbjct: 44 CMSCKVIIEDGDAYALVQHATLYCGKCHNEVVSGPSS 80
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 84.2 bits (209), Expect = 3e-18
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 32/178 (17%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDP-----GQPLPWGQRVN 203
+++++ L H N++R V++ + KL LV E++ LK+ + + L
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
F + G+ + H ++HRDL QN L+ + + + DFGLAR
Sbjct: 113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-------------- 158
Query: 264 PRKAAQRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
G ++ VV Y AP+++ G + Y ++D++S G +L E+I P
Sbjct: 159 --------GIPVNTFSSEVVTLWYR-APDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 85.2 bits (211), Expect = 3e-18
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 39/214 (18%)
Query: 140 GEACQNCGQVAVLRSLHHHNVIRFIGVL--YKDRKLNLVTEYIAGGTLKELL-------- 189
G + C ++A+LR L H NVI V + DRK+ L+ +Y A L ++
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKA 118
Query: 190 QDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDK----TVVVADFGL 245
LP G + I G+ YLH+ ++HRDL N LV + V +AD G
Sbjct: 119 NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 246 ARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM-APEMMTG-QEYDETVDV 303
AR+ + + + V T W APE++ G + Y + +D+
Sbjct: 179 ARLFNSPLKPLADLDPVV--------------VTF-----WYRAPELLLGARHYTKAIDI 219
Query: 304 FSYGIVLCEIIGRVP---ADPDYLPRSPDFGLDQ 334
++ G + E++ P + + S + DQ
Sbjct: 220 WAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 83.0 bits (206), Expect = 6e-18
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 25/171 (14%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDI 208
V+ L H ++ D KL Y G L + ++ G F +I
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---CTRFYTAEI 139
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ + YLH +IHRDL +N L+ ED + + DFG A+++ +
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA---------- 189
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+ VG +++PE++T + ++ D+++ G ++ + + G P
Sbjct: 190 ---------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 90
Score = 76.7 bits (189), Expect = 1e-17
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 22/104 (21%)
Query: 41 WYFEKDGLLFCKEDY-NGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDG 99
++D L+ E GK C +C Q++ GP +V +HPE F C C +
Sbjct: 5 SSGDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYI 64
Query: 100 ESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ E+ G L+C+ Y +
Sbjct: 65 G---------------------FVEEKGALYCELCYEKFFASGP 87
Score = 36.3 bits (84), Expect = 0.002
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEAC 63
C+ C + + E+ G L+C+ Y +
Sbjct: 54 CAHCKNTMAYIGFVEEKGALYCELCYEKFFASGP 87
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 82.3 bits (204), Expect = 1e-17
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
V++L+ L H N+I V++ + +L+L+ EY LK+ + D + +F +
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM-DKNPDVSMRVIKSFLYQL 141
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLV-----REDKTVVVADFGLARIIHQGPRAPTTVMAKV 263
G+ + HS +HRDL QN L+ E + + DFGLAR
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-------------- 187
Query: 264 PRKAAQRRGARKKRYT--VVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
G +++T ++ Y PE++ G + Y +VD++S + E++ + P
Sbjct: 188 --------GIPIRQFTHEIITLWYR-PPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 82.8 bits (205), Expect = 2e-17
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 152 LRSLHHH-NVIRFIGVLY--KDRKLNLVTEYIAGGT-LKELLQDPGQPLPWGQRVNFARD 207
L L H N++ + VL DR + LV +Y+ T L +++ L +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYM--ETDLHAVIR--ANILEPVHKQYVVYQ 117
Query: 208 IAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKA 267
+ + YLHS L+HRD+ N L+ + V VADFGL+R R + +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 268 AQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
+ V ++ APE ++ +Y + +D++S G +L EI+ P
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 82.0 bits (203), Expect = 3e-17
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 32/173 (18%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ ++H N+I + V + L +V E + L +++Q L +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ---MELDHERMSYLL 133
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ +LHS +IHRDL N +V+ D T+ + DFGLAR V
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV------ 187
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
R Y+ APE++ G Y E VD++S G ++ E+I
Sbjct: 188 --VTR--------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain,
ablim2, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 81
Score = 74.8 bits (184), Expect = 5e-17
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 54 DYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSA 113
DY YG C +C Q + G V+ +HP+CF C C G+ + +C
Sbjct: 9 DYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQK 68
Query: 114 CD 115
C
Sbjct: 69 CS 70
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 82.1 bits (203), Expect = 5e-17
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPW--GQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQ 228
L LV + GG ++ + + + P R F I +G+ +LH N+I+RDL +
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 229 NCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
N L+ +D V ++D GLA + + G P +M
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----------------------KGYAGTPGFM 356
Query: 288 APEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
APE++ G+EYD +VD F+ G+ L E I R P
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion,
acrosom; 2.62A {Homo sapiens}
Length = 126
Score = 75.5 bits (186), Expect = 8e-17
Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 26/110 (23%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVV--GDHKFHP--E 85
C CD +L Y + CK Y + CQ C + V V + +H E
Sbjct: 33 CFDCDSILAGEIYVMVNDKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTYNNFSWHASTE 92
Query: 86 CFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDY 135
CF C+ CS C+ + + +G++FC +
Sbjct: 93 CFLCSCCSKCLIGQK---------------------FMPVEGMVFCSVEC 121
Score = 59.7 bits (145), Expect = 3e-11
Identities = 14/87 (16%), Positives = 22/87 (25%), Gaps = 22/87 (25%)
Query: 63 CQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C ++ S + +H + F C C +
Sbjct: 6 CAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAG---------------------EI 44
Query: 122 YFEKDGLLFCKEDYNGKYGEACQNCGQ 148
Y + CK Y + CQ C
Sbjct: 45 YVMVNDKPVCKPCYVKNHAVVCQGCHN 71
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 80.0 bits (198), Expect = 1e-16
Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 41/183 (22%)
Query: 152 LRSLHHHNVIRFIGVLY-------KDRKLNLVTEYIAGGTLKELL---QDPGQPLPWGQR 201
L LHH N+++ Y +D LN+V EY+ TL P
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPILI 131
Query: 202 VNFARDIAAGMTYLH--SMNLIHRDLNSQNCLV-REDKTVVVADFGLARIIHQGPRAPTT 258
F + + LH S+N+ HRD+ N LV D T+ + DFG A+ + P
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNV 189
Query: 259 --VMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTG-QEYDETVDVFSYGIVLCEIIG 315
+ R Y+ APE++ G Q Y VD++S G + E++
Sbjct: 190 AYI--------CSR--------------YYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227
Query: 316 RVP 318
P
Sbjct: 228 GEP 230
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 80.0 bits (198), Expect = 1e-16
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 29/173 (16%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN-----LVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
L HH N++ + + LVTE + L +++ D + F
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
I G+ LH ++HRDL+ N L+ ++ + + DF LAR V R
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV---THR- 197
Query: 267 AAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
++ APE +M + + + VD++S G V+ E+ R
Sbjct: 198 ------------------WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 79.6 bits (197), Expect = 1e-16
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 28/177 (15%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN-----LVTEYIAGGT-LKELLQDPGQPLPWGQRVNFA 205
L+ H N+I + D N ++ E + T L ++ Q L F
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELM--QTDLHRVIS--TQMLSDDHIQYFI 118
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ LH N+IHRDL N L+ + + V DFGLARII + + +
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 266 K---AAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A R ++ APE M+T +Y +DV+S G +L E+ R P
Sbjct: 179 MVEFVATR--------------WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 78.8 bits (195), Expect = 2e-16
Identities = 56/181 (30%), Positives = 77/181 (42%), Gaps = 36/181 (19%)
Query: 149 VAVLRSLH---HHNVIRFIGVLYKDR-----KLNLVTEYIAGGTLKELLQD-PGQPLPWG 199
VA+LR L H NV+R + V R K+ LV E++ L+ L P LP
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE 120
Query: 200 QRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTV 259
+ R G+ +LH+ ++HRDL +N LV TV +ADFGLARI
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--------- 171
Query: 260 MAKVPRKAAQRRGARKKRYT--VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRV 317
T VV Y APE++ Y VD++S G + E+ R
Sbjct: 172 ---YQM-----------ALTPVVVTLWYR-APEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
Query: 318 P 318
P
Sbjct: 217 P 217
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 79.9 bits (197), Expect = 2e-16
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 32/173 (18%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
++ ++H N+I + V + L LV E L +++Q L +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQ---MELDHERMSYLL 170
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ +LHS +IHRDL N +V+ D T+ + DFGLAR V
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV------ 224
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
R Y+ APE++ G Y E VD++S G ++ E++
Sbjct: 225 --VTR--------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 78.9 bits (195), Expect = 3e-16
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 27/173 (15%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN-----LVTEYIAGGTLKELLQDPGQPLPWGQRVNFAR 206
L H N+I ++ +V + + L +LL+ Q L F
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLK--TQHLSNDHICYFLY 135
Query: 207 DIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRK 266
I G+ Y+HS N++HRDL N L+ + + DFGLAR+ + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV--- 192
Query: 267 AAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
A R ++ APE M+ + Y +++D++S G +L E++ P
Sbjct: 193 -ATR--------------WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 78.4 bits (194), Expect = 3e-16
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 152 LRSLHHHNVIRFIGVLY-----KDRKLNLVTEYIAGGTLKELLQDPGQP-LPWGQRVNFA 205
L + H NV+R V ++ KL LV E++ L L +P +P +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ +LHS ++HRDL QN LV + +ADFGLARI
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS------------FQM 174
Query: 266 KAAQRRGARKKRYT--VVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVP 318
T VV Y APE++ Y VD++S G + E+ R P
Sbjct: 175 -----------ALTSVVVTLWYR-APEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 78.1 bits (193), Expect = 5e-16
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
L+ + H NVI + V D L+ LV ++ G L +L++ + L +
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK--HEKLGEDRIQFLV 134
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ Y+H+ +IHRDL N V ED + + DFGLAR V V R
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMTGYV---VTR 189
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
++ APE ++ Y +TVD++S G ++ E+I
Sbjct: 190 -------------------WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 77.4 bits (191), Expect = 8e-16
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 34/174 (19%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
L+ + H NVI + V R L LVT + G L +++ Q L
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLI 138
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
I G+ Y+HS ++IHRDL N V ED + + DFGLAR H V R
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYV---ATR 193
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
++ APE M+ Y++TVD++S G ++ E++
Sbjct: 194 -------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 77.6 bits (191), Expect = 2e-15
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQNC 230
KL+ + + + GG L L G + F A +I G+ ++H+ +++RDL N
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSE--ADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 231 LVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPE 290
L+ E V ++D GLA + K + VG +MAPE
Sbjct: 324 LLDEHGHVRISDLGLACDFSKK-----------------------KPHASVGTHGYMAPE 360
Query: 291 MMT-GQEYDETVDVFSYGIVLCE-IIGRVP 318
++ G YD + D FS G +L + + G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 76.2 bits (188), Expect = 2e-15
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 35/174 (20%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN------LVTEYIAGGTLKELLQDPGQPLPWGQRVNFA 205
L+ + H NVI + V L LV ++ L++++ +
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMG---LKFSEEKIQYLV 132
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
+ G+ Y+HS ++HRDL N V ED + + DFGLAR M
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-------DAEMTG--- 182
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGIVLCEIIGRVP 318
Y V ++ APE +++ Y++TVD++S G ++ E++
Sbjct: 183 ------------Y--VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 80
Score = 70.1 bits (172), Expect = 2e-15
Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 21/97 (21%)
Query: 47 GLLFCKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVE 106
+D+ + C C + + + D +HPECF C C G
Sbjct: 2 SSGSSGKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGS------ 55
Query: 107 RSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+FE DG FC+ Y+ + G
Sbjct: 56 ---------------FFELDGRPFCELHYHHRRGSGP 77
Score = 36.2 bits (84), Expect = 0.002
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEAC 63
C C +FE DG FC+ Y+ + G
Sbjct: 44 CGDCFTSFSTGSFFELDGRPFCELHYHHRRGSGP 77
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 75.7 bits (187), Expect = 3e-15
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V EY+ GG L +Q + P F + +I+ + YLH +I+RDL N
Sbjct: 84 RLFFVIEYVNGGDLMFHMQRQRKLPEE---HARFYSAEISLALNYLHERGIIYRDLKLDN 140
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ + + + D+G+ + + G T G P ++A
Sbjct: 141 VLLDSEGHIKLTDYGMCKEGLRPGDTT----------------------STFCGTPNYIA 178
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLPRSPD 329
PE++ G++Y +VD ++ G+++ E + GR P D +PD
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 74.9 bits (185), Expect = 4e-15
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
KL L+ +++ GG L L V F ++A + +LHS+ +I+RDL +N
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAELALALDHLHSLGIIYRDLKPEN 156
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ E+ + + DFGL++ I +A Y+ G +MA
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKA----------------------YSFCGTVEYMA 194
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ + + ++ D +S+G+++ E + G +P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 75.1 bits (185), Expect = 6e-15
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 32/159 (20%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQ 228
+ L LV EY GG L LL G+ +P + F +I + +H + +HRD+
Sbjct: 133 ENYLYLVMEYYVGGDLLTLLSKFGERIP-AEMARFYLAEIVMAIDSVHRLGYVHRDIKPD 191
Query: 229 NCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
N L+ + +ADFG ++ G + VG P ++
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGT---------------------VRSLVAVGTPDYL 230
Query: 288 APEMMTGQE-------YDETVDVFSYGIVLCE-IIGRVP 318
+PE++ Y D ++ G+ E G+ P
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting
protein 1, zyxin related protein 1 (ZRP-1), structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 81
Score = 68.5 bits (168), Expect = 7e-15
Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 20/93 (21%)
Query: 51 CKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSIL 110
E E C C Q + ++ +HP CF C C +
Sbjct: 6 SGEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDG------------ 53
Query: 111 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ + + C ED++ K+
Sbjct: 54 --------IPFTVDATSQIHCIEDFHRKFASGP 78
Score = 37.0 bits (86), Expect = 0.001
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 31 CSACDVMLDN--WYFEKDGLLFCKEDYNGKYGEAC 63
C C LD + + + C ED++ K+
Sbjct: 44 CVVCHRGLDGIPFTVDATSQIHCIEDFHRKFASGP 78
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 74.6 bits (184), Expect = 7e-15
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V E++ GG L +Q + R F A +I + + +LH +I+RDL N
Sbjct: 98 RLFFVMEFVNGGDLMFHIQKSRRFDEA---RARFYAAEIISALMFLHDKGIIYRDLKLDN 154
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ + +ADFG+ + I G T G P ++A
Sbjct: 155 VLLDHEGHCKLADFGMCKEGICNGVTT----------------------ATFCGTPDYIA 192
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ Y VD ++ G++L E + G P
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 74.7 bits (184), Expect = 8e-15
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNS 227
+ + +V + + GG L+ LQ V ++ + YL + +IHRD+
Sbjct: 87 EEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVKLFICELVMALDYLQNQRIIHRDMKP 143
Query: 228 QNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
N L+ E V + DF +A ++ + + T+ G +M
Sbjct: 144 DNILLDEHGHVHITDFNIAAMLPRETQI----------------------TTMAGTKPYM 181
Query: 288 APEMMTGQE---YDETVDVFSYGIVLCE-IIGRVP 318
APEM + ++ Y VD +S G+ E + GR P
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 73.7 bits (182), Expect = 1e-14
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
KL L+ EY++GG L L+ G F +I+ + +LH +I+RDL +N
Sbjct: 95 KLYLILEYLSGGELFMQLEREGIFMED---TACFYLAEISMALGHLHQKGIIYRDLKPEN 151
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
++ V + DFGL + IH G +T G +MA
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTVT----------------------HTFCGTIEYMA 189
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ ++ VD +S G ++ + + G P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 74.3 bits (183), Expect = 1e-14
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V EY+ GG L +Q + P F + +I+ + YLH +I+RDL N
Sbjct: 127 RLFFVIEYVNGGDLMFHMQRQRKLPEE---HARFYSAEISLALNYLHERGIIYRDLKLDN 183
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ + + + D+G+ + + G T G P ++A
Sbjct: 184 VLLDSEGHIKLTDYGMCKEGLRPGDTT----------------------STFCGTPNYIA 221
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVPADPDYLPRSPD 329
PE++ G++Y +VD ++ G+++ E + GR P D +PD
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 73.8 bits (182), Expect = 1e-14
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V EY GG L L R F +I + + YLHS ++++RD+ +N
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEE---RARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
++ +D + + DFGL + I G T G P ++A
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATM----------------------KTFCGTPEYLA 173
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ +Y VD + G+V+ E + GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 73.8 bits (182), Expect = 1e-14
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
KL V +YI GG L LQ P R F A +IA+ + YLHS+N+++RDL +N
Sbjct: 113 KLYFVLDYINGGELFYHLQRERCFLEP---RARFYAAEIASALGYLHSLNIVYRDLKPEN 169
Query: 230 CLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ +V+ DFGL I T G P ++A
Sbjct: 170 ILLDSQGHIVLTDFGLCKENIEHNSTT----------------------STFCGTPEYLA 207
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ Q YD TVD + G VL E + G P
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 73.4 bits (181), Expect = 1e-14
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
L V EY+ GG L +Q + L R F A +I G+ +LHS +++RDL N
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLS---RATFYAAEIILGLQFLHSKGIVYRDLKLDN 148
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
L+ +D + +ADFG+ + + + T G P ++A
Sbjct: 149 ILLDKDGHIKIADFGMCKENMLGDAKT----------------------NTFCGTPDYIA 186
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ GQ+Y+ +VD +S+G++L E +IG+ P
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 73.5 bits (181), Expect = 1e-14
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDI 208
+L++++ +++ + L +V EY+AGG + L+ G+ P F A I
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYAAQI 150
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
YLHS++LI+RDL +N L+ + + V DFG A+ + T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RT---------- 195
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
+T+ G P +APE++ + Y++ VD ++ G+++ E G P
Sbjct: 196 ---------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 74.0 bits (182), Expect = 1e-14
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 170 DRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQ 228
D L LV +Y GG L LL LP + F ++ + +H ++ +HRD+
Sbjct: 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLP-EEMARFYLAEMVIAIDSVHQLHYVHRDIKPD 204
Query: 229 NCLVREDKTVVVADFGLA-RIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
N L+ + + +ADFG +++ G + VG P ++
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDG---------------------TVQSSVAVGTPDYI 243
Query: 288 APEMMTGQE-----YDETVDVFSYGIVLCE-IIGRVP 318
+PE++ E Y D +S G+ + E + G P
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 73
Score = 67.1 bits (163), Expect = 2e-14
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSAC 114
C +C + ++G V+ G+ +HP C C C +GE L SI AC
Sbjct: 3 SGSSGCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPAC 59
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 73.2 bits (180), Expect = 2e-14
Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 70/212 (33%)
Query: 152 LRSLHHHNVIRFIGVLY--------------------------------------KDRKL 173
++ L H N+I+ + Y +++ L
Sbjct: 54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 174 NLVTEYIAGGTLKELLQ---DPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNC 230
N++ EY+ TL ++L+ G+ +P + + + ++HS+ + HRD+ QN
Sbjct: 114 NVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL 172
Query: 231 LV-REDKTVVVADFGLARIIHQGPRAPTT--VMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
LV +D T+ + DFG A+ + P+ + R ++
Sbjct: 173 LVNSKDNTLKLCDFGSAKKLIPSE--PSVAYI--------CSR--------------FYR 208
Query: 288 APEMMTG-QEYDETVDVFSYGIVLCEIIGRVP 318
APE+M G EY ++D++S G V E+I P
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKP 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 72.4 bits (178), Expect = 3e-14
Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 149 VAVLRSLHHH--NVIRFIGVLYKDRKLNLVTEYIAGGTLKEL---LQDPGQPLPWGQRVN 203
V +L+ + VIR + + L+ E ++L + + G L +
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV--QDLFDFITERG-ALQEELARS 153
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAK 262
F + + + H+ ++HRD+ +N L+ ++ + + DFG ++
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--------- 204
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVP 318
G + PE + Y + V+S GI+L +++ G +P
Sbjct: 205 --------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 71.9 bits (177), Expect = 5e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V EY+ GG L +Q G+ P F A +IA G+ +L S +I+RDL N
Sbjct: 95 RLYFVMEYVNGGDLMYHIQQVGRFKEP---HAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 151
Query: 230 CLVREDKTVVVADFGLARI-IHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
++ + + +ADFG+ + I G T G P ++A
Sbjct: 152 VMLDSEGHIKIADFGMCKENIWDGVTT----------------------KTFCGTPDYIA 189
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ Q Y ++VD +++G++L E + G+ P
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 72.4 bits (178), Expect = 5e-14
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 37/178 (20%)
Query: 151 VLRSLHHHNVIRFIGVLY----KDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNF-A 205
++ + ++ L+ DR L +V EY+ GG L L+ + P W + F
Sbjct: 122 IMAFANS----PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR---FYT 174
Query: 206 RDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPR 265
++ + +HSM IHRD+ N L+ + + +ADFG +++
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-------- 226
Query: 266 KAAQRRGARKKRYTVVGNPYWMAPEMMTGQ----EYDETVDVFSYGIVLCE-IIGRVP 318
T VG P +++PE++ Q Y D +S G+ L E ++G P
Sbjct: 227 ------------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 70.9 bits (174), Expect = 6e-14
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 154 SLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMT 213
+ V R + V++ +V E+I GG+L+E+ P+ + + +AA
Sbjct: 87 RIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPV---GAIRAMQSLAAAAD 143
Query: 214 YLHSMNLIHRDLNSQNCLVREDKTVVVADFGLAR 247
H + + V D VV+A
Sbjct: 144 AAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 71.1 bits (175), Expect = 8e-14
Identities = 36/190 (18%), Positives = 75/190 (39%), Gaps = 51/190 (26%)
Query: 152 LRSLHHHNVIRFIGVLYKDRKLN--------------LVTEYIAGGT-LKELLQDPGQPL 196
+R L H N+++ +L +V EY+ T L +L+ PL
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM--ETDLANVLE--QGPL 117
Query: 197 PWGQRVNFARDIAAGMTYLHSMNLIHRDL-------NSQNCLVREDKTVVVADFGLARII 249
F + G+ Y+HS N++HRDL N+++ +++ + DFGLARI+
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK------IGDFGLARIM 171
Query: 250 HQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPE-MMTGQEYDETVDVFSYGI 308
+ + + ++ +P +++ Y + +D+++ G
Sbjct: 172 DPHYSHKGHLSEGL----VTK--------------WYRSPRLLLSPNNYTKAIDMWAAGC 213
Query: 309 VLCEIIGRVP 318
+ E++
Sbjct: 214 IFAEMLTGKT 223
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 71.7 bits (176), Expect = 9e-14
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHS-MNLIHRDLNSQ 228
+L V EY GG L L R F +I + + YLHS N+++RDL +
Sbjct: 222 RLCFVMEYANGGELFFHLSRERVFSED---RARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 229 NCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMA 288
N ++ +D + + DFGL K + GA K T G P ++A
Sbjct: 279 NLMLDKDGHIKITDFGLC-------------------KEGIKDGATMK--TFCGTPEYLA 317
Query: 289 PEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
PE++ +Y VD + G+V+ E + GR+P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1,
LIM domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Length = 101
Score = 64.7 bits (158), Expect = 2e-13
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGP--VMVVGDHKFHPECF 87
C+ C L + + KD + C + + C+ C + + + +H +CF
Sbjct: 36 CAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCF 95
Query: 88 KCTSC 92
S
Sbjct: 96 SGPSS 100
Score = 58.6 bits (142), Expect = 4e-11
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 23/93 (24%)
Query: 58 KYGEACQNCGQMMSG--PVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
C C + + + + +H CF+C C + +
Sbjct: 3 SGSSGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANE---------------- 46
Query: 116 VMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
+ KD + C + + C+ C +
Sbjct: 47 -----TFVAKDNKILCNKCTTREDSPKCKGCFK 74
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 69.3 bits (170), Expect = 3e-13
Identities = 51/235 (21%), Positives = 83/235 (35%), Gaps = 55/235 (23%)
Query: 149 VAVLRSLH----HHNVIRFIGVLYKDRKLNLVTEY-IAGGTLKELLQDPGQPLPWGQRVN 203
VA+L + H VIR + LV E + L + + + G PL G
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRC 143
Query: 204 FARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVV-VADFGLARIIHQGPRAPTTVMAK 262
F + A + + HS ++HRD+ +N L+ + + DFG ++H P
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--------- 194
Query: 263 VPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYD-ETVDVFSYGIVLCEII-GRVPAD 320
G + PE ++ +Y V+S GI+L +++ G +P
Sbjct: 195 --------------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP-- 238
Query: 321 PDYLPRSPDFGLDQTDFRNKFCASCPEPFVRIAFLCCDL-------NPDQRPPFE 368
F DQ + P ++ CC L P RP E
Sbjct: 239 ---------FERDQEILEAEL--HFPA---HVSPDCCALIRRCLAPKPSSRPSLE 279
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 69.6 bits (171), Expect = 3e-13
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
KL+L+ +YI GG L L + V +I + +LH + +I+RD+ +N
Sbjct: 133 KLHLILDYINGGELFTHLSQRERFTEH---EVQIYVGEIVLALEHLHKLGIIYRDIKLEN 189
Query: 230 CLVREDKTVVVADFGLAR--IIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWM 287
L+ + VV+ DFGL++ + + RA Y G +M
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERA----------------------YDFCGTIEYM 227
Query: 288 APEMMTGQE--YDETVDVFSYGIVLCE-IIGRVP 318
AP+++ G + +D+ VD +S G+++ E + G P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 69.1 bits (170), Expect = 3e-13
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 30/171 (17%)
Query: 151 VLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDI 208
+L + H +IR G +++ ++ +YI GG L LL+ + P P F A ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP---VAKFYAAEV 115
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAA 268
+ YLHS ++I+RDL +N L+ ++ + + DFG A+ + T
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VT---------- 160
Query: 269 QRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
YT+ G P ++APE+++ + Y++++D +S+GI++ E + G P
Sbjct: 161 ---------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 70.4 bits (172), Expect = 4e-13
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 27/150 (18%)
Query: 172 KLNLVTEYIAGGTLKELLQDPGQ-PLPWGQRVNF-ARDIAAGMTYLHSMNLIHRDLNSQN 229
+L V EY+ GG L +Q G+ P F A +IA G+ +L S +I+RDL N
Sbjct: 416 RLYFVMEYVNGGDLMYHIQQVGRFKEP---HAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 472
Query: 230 CLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAP 289
++ + + +ADFG+ K G K T G P ++AP
Sbjct: 473 VMLDSEGHIKIADFGMC-------------------KENIWDGVTTK--TFCGTPDYIAP 511
Query: 290 EMMTGQEYDETVDVFSYGIVLCE-IIGRVP 318
E++ Q Y ++VD +++G++L E + G+ P
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 66.6 bits (162), Expect = 4e-13
Identities = 22/131 (16%), Positives = 37/131 (28%), Gaps = 22/131 (16%)
Query: 21 CRSSLIFTSGCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ-MMSGPVMVVGD 79
+L G S + + + C CGQ + + ++
Sbjct: 76 GAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAG 135
Query: 80 HKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKY 139
+H CF+C C + +KDG ++CK Y +
Sbjct: 136 KSWHKSCFRCAKCGKSLESTT---------------------LADKDGEIYCKGCYAKNF 174
Query: 140 GEACQNCGQVA 150
G GQ A
Sbjct: 175 GPKGFGFGQGA 185
Score = 45.4 bits (107), Expect = 9e-06
Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 22/90 (24%)
Query: 60 GEACQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVML 118
G+ C C + + FH CF C C +
Sbjct: 7 GKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTT------------------ 48
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
++CK Y KYG + G
Sbjct: 49 ---VAVHGDEIYCKSCYGKKYGPKGKGKGM 75
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 80
Score = 63.1 bits (154), Expect = 6e-13
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 21/95 (22%)
Query: 49 LFCKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERS 108
Y K+ C C + ++ + D +H EC CT C + +
Sbjct: 4 GSSGPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQ-------- 55
Query: 109 ILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ +D +C + +
Sbjct: 56 -------------FTSRDEDPYCVACFGELFASGP 77
Score = 34.6 bits (80), Expect = 0.007
Identities = 5/34 (14%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYGEAC 63
C+ C L + +D +C + +
Sbjct: 44 CTGCQTPLAGQQFTSRDEDPYCVACFGELFASGP 77
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM
domain protein CLP-36, contractIle protein, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 79
Score = 62.8 bits (153), Expect = 7e-13
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 21/90 (23%)
Query: 54 DYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSA 113
N + C CG + G + + D HPEC+ CT C +
Sbjct: 9 IGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQK-------------- 54
Query: 114 CDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+F + ++C++ +
Sbjct: 55 -------GHFFVEDQIYCEKHARERVSGPS 77
Score = 38.6 bits (90), Expect = 3e-04
Identities = 5/34 (14%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEAC 63
C+ C L +F + ++C++ +
Sbjct: 44 CTDCGTNLKQKGHFFVEDQIYCEKHARERVSGPS 77
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM
domain 3, structural genomics, NPPSFA; NMR {Mus
musculus} SCOP: g.39.1.3 g.39.1.3
Length = 89
Score = 61.7 bits (150), Expect = 2e-12
Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 21/89 (23%)
Query: 55 YNGKYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSAC 114
+ + C CG + G V+ D HPECF C C+ +
Sbjct: 20 GSAQRMPLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQK--------------- 64
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
YF +G L+C+ +
Sbjct: 65 ------GYFFVEGELYCETHARARTSGPS 87
Score = 37.5 bits (87), Expect = 8e-04
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEAC 63
C+ C++ L YF +G L+C+ +
Sbjct: 54 CADCNLNLKQKGYFFVEGELYCETHARARTSGPS 87
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 80
Score = 61.3 bits (149), Expect = 2e-12
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 23/91 (25%)
Query: 54 DYNGKYGEACQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCS 112
+ C C + G ++ D ++H CFKC +CS
Sbjct: 9 PIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSV------------------ 50
Query: 113 ACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+L Y KDG+ +C+ DY+ ++G
Sbjct: 51 ----ILTGEYISKDGVPYCESDYHAQFGSGP 77
Score = 49.4 bits (118), Expect = 4e-08
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 63
C C V+L Y KDG+ +C+ DY+ ++G
Sbjct: 45 CQTCSVILTGEYISKDGVPYCESDYHAQFGSGP 77
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 70
Score = 60.9 bits (148), Expect = 3e-12
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 22/85 (25%)
Query: 63 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWY 122
C CG+ + G V+ ++ +HPECF+C C + D +
Sbjct: 8 CHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG---------------------F 46
Query: 123 FEKDGLLFCKEDYNGKYGEACQNCG 147
+ G C+ +N + + G
Sbjct: 47 VKNAGRHLCRPCHNREKASGP-SSG 70
Score = 31.6 bits (72), Expect = 0.063
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEACQNCG 67
C C +L D + + G C+ +N + + G
Sbjct: 34 CDLCQEVLADIGFVKNAGRHLCRPCHNREKASGP-SSG 70
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein
2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 82
Score = 61.0 bits (148), Expect = 3e-12
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 23/96 (23%)
Query: 50 FCKEDYNGKYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVER 107
Y+ + C C Q + D FH CF+C C + D
Sbjct: 5 SSGPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEP------- 57
Query: 108 SILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ +D L C + Y +
Sbjct: 58 --------------FTCQDSELLCNDCYCSAFSSGP 79
Score = 32.9 bits (75), Expect = 0.030
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEAC 63
C C L + + +D L C + Y +
Sbjct: 46 CCRCQRSLADEPFTCQDSELLCNDCYCSAFSSGP 79
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 65.0 bits (159), Expect = 6e-12
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 149 VAVLRSLHHH-NVIRFIGV----LYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQR-- 201
V + +++R + V + L +V E + GG L +QD G + +R
Sbjct: 61 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREA 119
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVR---EDKTVVVADFGLARII 249
+ I + YLHS+N+ HRD+ +N L + + + DFG A+
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM
domains protein 1, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 82
Score = 60.1 bits (146), Expect = 7e-12
Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 23/99 (23%)
Query: 47 GLLFCKEDYNGKYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYAL 104
+ + C+ C + + + +H +CF C++C IG G
Sbjct: 2 SSGSSGKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGS---- 57
Query: 105 VERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+F K +C + K+
Sbjct: 58 -----------------FFPKGEDFYCVTCHETKFASGP 79
Score = 35.0 bits (81), Expect = 0.005
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYGEAC 63
CS C ++ +F K +C + K+
Sbjct: 46 CSNCKQVIGTGSFFPKGEDFYCVTCHETKFASGP 79
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3,
LIM-domain protein DRAL, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 70
Score = 58.9 bits (143), Expect = 1e-11
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 21/86 (24%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVM 117
C C + ++ + + +H ECF CT+C +
Sbjct: 3 SGSSGCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQR----------------- 45
Query: 118 LDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ +D +C + Y
Sbjct: 46 ----FTARDDFAYCLNCFCDLYASGP 67
Score = 34.6 bits (80), Expect = 0.005
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYGEAC 63
C+AC L + +D +C + Y
Sbjct: 34 CTACRKQLSGQRFTARDDFAYCLNCFCDLYASGP 67
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4;
protein-protein interaction, LIM-interaction DOM LMO4,
RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo
sapiens}
Length = 123
Score = 60.1 bits (145), Expect = 2e-11
Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 20/115 (17%)
Query: 27 FTSGCSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ-MMSGPVMVVGDHKFHPE 85
+ + D + G G + C CG + ++ D +H
Sbjct: 28 YKMDVTVIDTKDGSQSKLGGGGSGGHMGSGGLSWKRCAGCGGKIADRFLLYAMDSYWHSR 87
Query: 86 CFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWYFEKDGLLFCKEDYNGKYG 140
C KC+SC +GD + + K G++ C+ DY +G
Sbjct: 88 CLKCSSCQAQLGDIGT-------------------SSYTKSGMILCRNDYIRLFG 123
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Length = 66
Score = 57.7 bits (140), Expect = 3e-11
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 21/79 (26%)
Query: 63 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWY 122
C C + + G V+ ++H E F C C +
Sbjct: 8 CGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGH---------------------RH 46
Query: 123 FEKDGLLFCKEDYNGKYGE 141
+E+ GL +C+ YN +G+
Sbjct: 47 YERKGLAYCETHYNQLFGD 65
Score = 38.0 bits (89), Expect = 3e-04
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYGE 61
C+ C+ ++E+ GL +C+ YN +G+
Sbjct: 34 CAKCEKPFLGHRHYERKGLAYCETHYNQLFGD 65
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1,
skeletal muscle LIM- protein 1, SLIM 1, structural
genomics NPPSFA; NMR {Homo sapiens}
Length = 77
Score = 57.9 bits (140), Expect = 4e-11
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 47 GLLFCKEDYNGKYGEACQNCGQMMSGP-----VMVVGDHKFHPECFKCTSCSCCIGDGES 101
+ Y + C C ++G V+ +H CF C CS + +
Sbjct: 2 SSGSSGDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLA-NKR 60
Query: 102 YALVERSILCSAC 114
+ + + C C
Sbjct: 61 FVFHQEQVYCPDC 73
Score = 25.9 bits (57), Expect = 7.8
Identities = 5/27 (18%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYN 56
C C V L + + ++C +
Sbjct: 49 CKKCSVNLANKRFVFHQEQVYCPDCAK 75
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein
1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 69
Score = 56.6 bits (137), Expect = 9e-11
Identities = 11/82 (13%), Positives = 23/82 (28%), Gaps = 21/82 (25%)
Query: 63 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWY 122
C C + ++ + D +H +CF C +CS + +
Sbjct: 8 CVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQR---------------------F 46
Query: 123 FEKDGLLFCKEDYNGKYGEACQ 144
+ +C + Y
Sbjct: 47 TAVEDQYYCVDCYKNFVSGPSS 68
Score = 32.4 bits (74), Expect = 0.033
Identities = 5/35 (14%), Positives = 9/35 (25%), Gaps = 1/35 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEACQ 64
C C L + + +C + Y
Sbjct: 34 CVTCSKKLAGQRFTAVEDQYYCVDCYKNFVSGPSS 68
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding
protein, zinc finger; NMR {Coturnix japonica} SCOP:
g.39.1.3 g.39.1.3 PDB: 2o10_A
Length = 81
Score = 56.3 bits (136), Expect = 1e-10
Identities = 19/90 (21%), Positives = 24/90 (26%), Gaps = 22/90 (24%)
Query: 60 GEACQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVML 118
G C CG+ + FH CF C C +
Sbjct: 7 GNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTT------------------ 48
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
D ++CK Y KYG GQ
Sbjct: 49 ---VAIHDAEVYCKSCYGKKYGPKGYGYGQ 75
Score = 40.1 bits (94), Expect = 7e-05
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEACQNCGQ 68
C C LD+ D ++CK Y KYG GQ
Sbjct: 37 CMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQ 75
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken
structural genomics/proteomics initiative, RSGI, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 72
Score = 55.5 bits (134), Expect = 2e-10
Identities = 15/88 (17%), Positives = 23/88 (26%), Gaps = 23/88 (26%)
Query: 58 KYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
C CG+ M + G +H CF C+ C +G
Sbjct: 3 SGSSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRS--------------- 47
Query: 116 VMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ G +C Y K+
Sbjct: 48 ------FVPDKGAHYCVPCYENKFASGP 69
Score = 37.4 bits (87), Expect = 5e-04
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEAC 63
CS C+ L + + G +C Y K+
Sbjct: 36 CSGCEQPLGSRSFVPDKGAHYCVPCYENKFASGP 69
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1;
LMO2(LIM2)-LDB1(LID), chimera, fusion protein,
oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Length = 123
Score = 56.2 bits (135), Expect = 4e-10
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 24/98 (24%)
Query: 55 YNGKYG--EACQNCGQMMSG--PVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSIL 110
Y +G C +C + + M V D +H ECFKC +C G+
Sbjct: 1 YLRLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFSVGD---------- 50
Query: 111 CSACDVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
Y + + C++D + G
Sbjct: 51 ----------RYLLINSDIVCEQDIYEWTKINGGSGGS 78
Score = 34.3 bits (78), Expect = 0.021
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 31 CSACDVMLD--NWYFEKDGLLFCKEDYNGKYGEACQNCGQMMSGP 73
C+AC + Y + + C++D + G SG
Sbjct: 39 CAACQKHFSVGDRYLLINSDIVCEQDIYEWTKINGGSGGSGGSGG 83
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the
N-terminal LIM domain of LMO4...; fusion protein, LMO
proteins, metal binding protein; NMR {Mus musculus}
SCOP: g.39.1.3 g.39.1.3
Length = 122
Score = 56.1 bits (135), Expect = 5e-10
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 20/100 (20%)
Query: 60 GEACQNCGQ-MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVML 118
+ C CG + ++ D +H C KC+SC +GD +
Sbjct: 5 WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGT----------------- 47
Query: 119 DNWYFEKDGLLFCKEDYNGKYGEACQNCGQVAVLRSLHHH 158
+ K G++ C+ DY +G + +
Sbjct: 48 --SSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGDVM 85
Score = 46.5 bits (110), Expect = 1e-06
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 15/92 (16%)
Query: 31 CSACDVMLDNW---YFEKDGLLFCKEDYNGKYGEACQNCGQMMSGPVMVVGDHKFHPECF 87
CS+C L + + K G++ C+ DY +G +
Sbjct: 35 CSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSG------------GHMGSGG 82
Query: 88 KCTSCSCCIGDGESYALVERSILCSACDVMLD 119
G + + ++ + D
Sbjct: 83 DVMVVGEPTLMGGEFGDEDERLITRLENTQFD 114
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1;
ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK,
IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Length = 72
Score = 53.9 bits (130), Expect = 7e-10
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 23/89 (25%)
Query: 54 DYNGKYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILC 111
+ G C+ C + ++ +H +CF C C +G
Sbjct: 5 YFQGSASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGL----------- 53
Query: 112 SACDVMLDNWYFEKDGLLFCKEDYNGKYG 140
++E +G +C+ D+ +
Sbjct: 54 ----------FYEFEGRKYCEHDFQMLFA 72
Score = 31.6 bits (72), Expect = 0.056
Identities = 6/31 (19%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYG 60
C+ C ++E +G +C+ D+ +
Sbjct: 42 CAQCFQQFPEGLFYEFEGRKYCEHDFQMLFA 72
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 77
Score = 54.3 bits (131), Expect = 7e-10
Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 23/92 (25%)
Query: 51 CKEDYNGKYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERS 108
+ N C+ C + ++ +H +CF C C +G
Sbjct: 2 SEFMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGL-------- 53
Query: 109 ILCSACDVMLDNWYFEKDGLLFCKEDYNGKYG 140
++E +G +C+ D+ +
Sbjct: 54 -------------FYEFEGRKYCEHDFQMLFA 72
Score = 30.8 bits (70), Expect = 0.14
Identities = 6/31 (19%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYG 60
C+ C ++E +G +C+ D+ +
Sbjct: 42 CAQCFQQFPEGLFYEFEGRKYCEHDFQMLFA 72
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 53.9 bits (130), Expect = 8e-10
Identities = 17/88 (19%), Positives = 22/88 (25%), Gaps = 23/88 (26%)
Query: 58 KYGEACQNCGQ--MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
CQ C + M M +H CF C C IG
Sbjct: 3 SGSSGCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKS--------------- 47
Query: 116 VMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ KD FC Y ++
Sbjct: 48 ------FIPKDNQNFCVPCYEKQHASGP 69
Score = 35.1 bits (81), Expect = 0.003
Identities = 7/34 (20%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 31 CSACDVML-DNWYFEKDGLLFCKEDYNGKYGEAC 63
C C + + KD FC Y ++
Sbjct: 36 CHRCQQPIGTKSFIPKDNQNFCVPCYEKQHASGP 69
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1;
LIM-interaction-domain (LID), metal binding protein; NMR
{Mus musculus} SCOP: g.39.1.3 g.39.1.3
Length = 114
Score = 54.3 bits (130), Expect = 2e-09
Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 20/91 (21%)
Query: 63 CQNCGQ-MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C Q + + D +H +C C C C +G+
Sbjct: 6 CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR-------------------R 46
Query: 122 YFEKDGLLFCKEDYNGKYGEACQNCGQVAVL 152
+ K G C+ DY G V+
Sbjct: 47 LYYKLGRKLCRRDYLRLGGSGGHMGSGGDVM 77
Score = 51.6 bits (123), Expect = 1e-08
Identities = 12/71 (16%), Positives = 18/71 (25%), Gaps = 7/71 (9%)
Query: 31 CSACDVMLDN---WYFEKDGLLFCKEDYNGKYGEACQNCGQMM----SGPVMVVGDHKFH 83
C C L + K G C+ DY G P ++ G+
Sbjct: 33 CDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLGGSGGHMGSGGDVMVVGEPTLMGGEFGDE 92
Query: 84 PECFKCTSCSC 94
E +
Sbjct: 93 DERLITRLENT 103
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 58.2 bits (141), Expect = 2e-09
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 149 VAVLRSL------HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELL-QDPGQPLPWGQR 201
+ +L L + NVI + + + E + L EL+ ++ Q
Sbjct: 144 IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLV 202
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE-DKTVV-VADFGLARIIHQGPRAPTTV 259
FA I + LH +IH DL +N L+++ ++ + V DFG + HQ
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-------- 254
Query: 260 MAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEI 313
+ YT + + ++ APE++ G Y +D++S G +L E+
Sbjct: 255 ----------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAEL 292
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting
protein 1, zyxin related protein 1 (ZRP-1), structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 50.9 bits (122), Expect = 1e-08
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 24/87 (27%)
Query: 63 CQNCGQMMSGPVMVVG--DHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDN 120
C CG+ + G V D FH CF C++C +
Sbjct: 8 CGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQH-------------------- 47
Query: 121 WYFEKDGLLFCKEDYNGKYGEACQNCG 147
++ + +C+ Y E+ + G
Sbjct: 48 -FYAVERRAYCEGCYVATL-ESGPSSG 72
Score = 35.5 bits (82), Expect = 0.003
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKEDYNGKYGEACQNCG 67
CS C L ++ + +C+ Y E+ + G
Sbjct: 36 CSTCRAQLRGQHFYAVERRAYCEGCYVATL-ESGPSSG 72
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 49.8 bits (119), Expect = 2e-08
Identities = 12/90 (13%), Positives = 24/90 (26%), Gaps = 25/90 (27%)
Query: 58 KYGEACQNCGQMMSGP----VMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSA 113
C C +SG + + ++H +CF C CS +
Sbjct: 3 SGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRG------------- 49
Query: 114 CDVMLDNWYFEKDGLLFCKEDYNGKYGEAC 143
+ + + C + G +
Sbjct: 50 --------FLTERDDILCPDCGKDISGPSS 71
Score = 28.6 bits (64), Expect = 0.64
Identities = 5/34 (14%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEAC 63
C C + L + + + C + G +
Sbjct: 38 CKKCSLSLVGRGFLTERDDILCPDCGKDISGPSS 71
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His
protein, LIM and senescent cell antigen-like domains 1,
structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 79
Score = 49.0 bits (117), Expect = 4e-08
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 22/74 (29%)
Query: 63 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNWY 122
CQ C ++ ++ + +HP+ F C +C L
Sbjct: 18 CQKCHAIIDEQPLIFKNDPYHPDHFNCANCGK----------------------ELTADA 55
Query: 123 FEKDGLLFCKEDYN 136
E G L+C ++
Sbjct: 56 RELKGELYCLPCHD 69
Score = 30.9 bits (70), Expect = 0.12
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 31 CSACDVMLDNWYFEKDGLLFCKEDYN 56
C+ C L E G L+C ++
Sbjct: 44 CANCGKELTADARELKGELYCLPCHD 69
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN
actin- interacting protein, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 76
Score = 48.7 bits (116), Expect = 5e-08
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 58 KYGEACQNCGQMMSGP----VMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSA 113
C C + +SG + D ++H ECF C CS + G+ + + I C
Sbjct: 3 SGSSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLV-GKGFLTQNKEIFCQK 61
Query: 114 C 114
C
Sbjct: 62 C 62
Score = 26.0 bits (57), Expect = 6.0
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEACQNCG 67
C C V L + ++ +FC++ +G +
Sbjct: 38 CGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDISGPSS 75
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 52.4 bits (126), Expect = 1e-07
Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 33/148 (22%)
Query: 175 LVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGMTYLHSM-NLIHRDLNSQNCLV 232
+V E + G L L++ + +P ++ + G+ Y+H +IH D+ +N L+
Sbjct: 107 MVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Query: 233 RE------DKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYW 286
+ +AD G A + + +
Sbjct: 166 EIVDSPENLIQIKIADLGNACWYDE------------------------HYTNSIQTREY 201
Query: 287 MAPEMMTGQEYDETVDVFSYGIVLCEII 314
+PE++ G + D++S ++ E+I
Sbjct: 202 RSPEVLLGAPWGCGADIWSTACLIFELI 229
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 51.6 bits (124), Expect = 2e-07
Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 36/175 (20%)
Query: 149 VAVLRSL------HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPWGQR 201
V +L + + ++ L LV E + L +LL++ + +
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLT 159
Query: 202 VNFARDIAAGMTYLHS--MNLIHRDLNSQNCLVREDK--TVVVADFGLARIIHQGPRAPT 257
FA+ + + +L + +++IH DL +N L+ K + + DFG + + Q
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ------ 213
Query: 258 TVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
+ Y + + ++ +PE++ G YD +D++S G +L E
Sbjct: 214 ------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVE 250
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM
domain protein; NMR {Rattus rattus} SCOP: g.39.1.3
g.39.1.3
Length = 76
Score = 47.0 bits (112), Expect = 3e-07
Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 23/87 (26%)
Query: 63 CQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVMLDNW 121
C C + + +H C KC C + G
Sbjct: 3 CPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSG---------------------G 41
Query: 122 YFEKDGLLFCKED-YNGKYGEACQNCG 147
+ E +G +C Y+ +G G
Sbjct: 42 HAEHEGKPYCNHPCYSAMFGPKGFGRG 68
Score = 33.9 bits (78), Expect = 0.011
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 31 CSACDVMLDN-WYFEKDGLLFCKED-YNGKYGEACQNCGQMMS 71
C C L + + E +G +C Y+ +G G S
Sbjct: 30 CEKCGKTLTSGGHAEHEGKPYCNHPCYSAMFGPKGFGRGGAES 72
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 91
Score = 44.8 bits (106), Expect = 2e-06
Identities = 16/94 (17%), Positives = 27/94 (28%), Gaps = 30/94 (31%)
Query: 60 GEACQNCGQMMSGPV-----MVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSAC 114
E C C + V ++ FH CF+C+ C+ + G
Sbjct: 15 RETCVECQK----TVYPMERLLANQQVFHISCFRCSYCNNKLSLGT-------------- 56
Query: 115 DVMLDNWYFEKDGLLFCKEDYNGKYGEACQNCGQ 148
Y G ++CK +N +
Sbjct: 57 -------YASLHGRIYCKPHFNQLFKSKGNYDEG 83
Score = 34.4 bits (79), Expect = 0.010
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 31 CSACDVMLDNW-YFEKDGLLFCKEDYNGKYGEACQNCGQMMSGP 73
CS C+ L Y G ++CK +N + SGP
Sbjct: 45 CSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGSGP 88
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 47.2 bits (111), Expect = 5e-06
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 168 YKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLH-SMNLIHRDLN 226
+KD +L +V E+ GG L Q + + + A + S+ HRDL+
Sbjct: 132 FKDDQLFIVLEFEFGGID--LEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLH 189
Query: 227 SQNCLVREDKTVVVADFGLAR 247
N L+++ + +
Sbjct: 190 WGNVLLKKTSLKKLHYTLNGK 210
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 46.4 bits (110), Expect = 1e-05
Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 30/169 (17%)
Query: 175 LVTEYIAGGTLKELLQD-PGQPLPWGQRVNFARDIAAGMTYLHS-MNLIHRDLNSQNCLV 232
+V E + G L + + Q LP + + G+ YLH+ +IH D+ +N L+
Sbjct: 122 MVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
Query: 233 REDKTVVVADFGLARIIHQGPRAPTT--------------------------VMAKVPRK 266
++ + A + P + + K+
Sbjct: 181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADL 240
Query: 267 AAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCEIIG 315
+ + Y + E++ G Y+ D++S + E+
Sbjct: 241 GNACWVHKHFTEDIQTRQY-RSLEVLIGSGYNTPADIWSTACMAFELAT 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 45.8 bits (109), Expect = 1e-05
Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 27/178 (15%)
Query: 149 VAVLRSLHH------HNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPWGQR 201
+ VL+ + + + + E + G E L++ QP P
Sbjct: 67 INVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE-LLGKNTFEFLKENNFQPYPLPHV 125
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMA 261
+ A + + +LH L H DL +N L + + +
Sbjct: 126 RHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL------------YNEHKSCEE 173
Query: 262 KVPRKAAQRR---G----ARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
K + + R G + T+V ++ PE++ + + DV+S G +L E
Sbjct: 174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 45.8 bits (109), Expect = 2e-05
Identities = 31/177 (17%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 149 VAVLRSL-----HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPWGQRV 202
+L+ + +++N++++ G + L+ E G +L E++
Sbjct: 82 ADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIK 140
Query: 203 NFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAK 262
+ +I + YL M+L H DL +N L+ + F + I + +
Sbjct: 141 LYCIEILKALNYLRKMSLTHTDLKPENILLDDP------YFEKSLITVRRVTDGKKIQIY 194
Query: 263 VPRKAAQRR---G----ARKKRYTVVGNPYWMAPEMMTGQEYDETVDVFSYGIVLCE 312
+ + G +++ + APE++ +D + D++S+G VL E
Sbjct: 195 RTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.8 bits (108), Expect = 2e-05
Identities = 45/251 (17%), Positives = 78/251 (31%), Gaps = 75/251 (29%)
Query: 160 VIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMN 219
V +F+G Y + L L + F YL +
Sbjct: 61 VGKFLG--YVSSLVEPSKVGQFDQVLNLCLTE------------FEN------CYLEGND 100
Query: 220 LIH---RDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKK 276
IH L +N ++ ++ ARI+ + P + A +A A+
Sbjct: 101 -IHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALF--RAVGEGNAQL- 156
Query: 277 RYTVVGNPYWMAPEMMTGQ----EY-DETVDVF-SYGIVLCEIIGRVPADPDYLPRSPDF 330
+ G GQ +Y +E D++ +Y +++ ++I L R+
Sbjct: 157 -VAIFG-----------GQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTL- 203
Query: 331 GLDQTDFRNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKPLPSD 390
D F + + +L NP P + L LS+ +S PL
Sbjct: 204 -----DAEKVF----TQGLNILEWL---ENPSNTPDKDYL------LSIPISC--PL--- 240
Query: 391 LEADI--YQFA 399
I Q A
Sbjct: 241 ----IGVIQLA 247
Score = 35.8 bits (82), Expect = 0.037
Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 40/137 (29%)
Query: 324 LPRSPDFGLDQTDFRNKFCASCPEP----------------FVR-IAFLCCDLNPDQRPP 366
+P + F Q + +F PEP + + ++ + P +
Sbjct: 22 VPTASFFIASQ--LQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQ 79
Query: 367 F-EVLEV--------WLEGLSMHLSVDKPLPSDLEADI---------YQFATRKSASPLT 408
F +VL + +LEG +H ++ L + + + Y A + P
Sbjct: 80 FDQVLNLCLTEFENCYLEGNDIH-ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFD 138
Query: 409 EPECTAPTPA--DGALR 423
+ +A A +G +
Sbjct: 139 KKSNSALFRAVGEGNAQ 155
Score = 30.8 bits (69), Expect = 1.0
Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 42/115 (36%)
Query: 99 GESY-ALVERSILCSACDVMLDNWYFEKDG--LLF---------CKEDYNGK--YGEACQ 144
GE Y AL A DVM E ++F D G+ YG
Sbjct: 1765 GE-YAALA-----SLA-DVM----SIE-SLVEVVFYRGMTMQVAVPRDELGRSNYGMIAI 1812
Query: 145 NCGQVAVLRSLHH-HNVIRFIGVLYKDRKLNLVTE----------YIAGGTLKEL 188
N G+VA S V+ +G ++ + E Y+A G L+ L
Sbjct: 1813 NPGRVAASFSQEALQYVVERVG-----KRTGWLVEIVNYNVENQQYVAAGDLRAL 1862
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 76
Score = 40.8 bits (96), Expect = 4e-05
Identities = 14/77 (18%), Positives = 20/77 (25%), Gaps = 22/77 (28%)
Query: 60 GEACQNCGQM-MSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACDVML 118
C C + + +H C KC CS + G
Sbjct: 9 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGG------------------ 50
Query: 119 DNWYFEKDGLLFCKEDY 135
+ E DG FC +
Sbjct: 51 ---HAEHDGKPFCHKPC 64
Score = 27.0 bits (60), Expect = 3.1
Identities = 8/26 (30%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 31 CSACDVMLD-NWYFEKDGLLFCKEDY 55
C C L + E DG FC +
Sbjct: 39 CERCSKTLTPGGHAEHDGKPFCHKPC 64
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 43.4 bits (103), Expect = 9e-05
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 51/190 (26%)
Query: 149 VAVLRSL------HHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPG-QPLPWGQR 201
+ VL L ++ + + +V E + G + + +++ G P
Sbjct: 62 IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHI 120
Query: 202 VNFARDIAAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVA-------------------D 242
A I + +LHS L H DL +N L + D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 243 FGLARIIHQGPRAPTTVMAKVPRKAAQRRGARKKRYTVVGNPYWMAPEMMTGQEYDETVD 302
FG A + T+V ++ APE++ + + D
Sbjct: 181 FGSATYDDE------------------------HHSTLVSTRHYRAPEVILALGWSQPCD 216
Query: 303 VFSYGIVLCE 312
V+S G +L E
Sbjct: 217 VWSIGCILIE 226
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 43.5 bits (103), Expect = 9e-05
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLVRE 234
++ YI G K++++D ++ A I + LH ++IH DL + N + +
Sbjct: 416 IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK 466
Query: 235 DKTVVVADFGLARI 248
D + + DFGL +I
Sbjct: 467 D--LYIIDFGLGKI 478
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 42.0 bits (99), Expect = 2e-04
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 214 YLHSMNLIHRDLNSQNCLV-----REDKTVVVADFGLAR 247
+H +L++RD+ N L+ + + V DFG+ +
Sbjct: 121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 42.3 bits (99), Expect = 3e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 175 LVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDIAAGMTYLHSMNLIHRDLNSQNCLV-- 232
LV + + G +L++L + L + A + + ++HS + +HRD+ N L+
Sbjct: 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 138
Query: 233 -REDKTVVVADFGLAR 247
R V + DFGLA+
Sbjct: 139 GRRANQVYIIDFGLAK 154
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 42.1 bits (99), Expect = 3e-04
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 214 YLHSMNLIHRDLNSQNCLV--REDKTVVVADFGLAR 247
Y+H +H D+ + N L+ + V + D+GLA
Sbjct: 167 YIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 41.6 bits (98), Expect = 4e-04
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 214 YLHSMNLIHRDLNSQNCLV--REDKTVVVADFGLAR 247
Y+H +H D+ + N L+ + V +AD+GL+
Sbjct: 166 YIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSY 201
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 41.2 bits (97), Expect = 4e-04
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 214 YLHSMNLIHRDLNSQNCLV-----REDKTVVVADFGLAR 247
Y+HS NLI+RD+ +N L+ + + + + DF LA+
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 40.9 bits (96), Expect = 5e-04
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 214 YLHSMNLIHRDLNSQNCLV-REDKTVV-VADFGLAR 247
+LH +H ++ ++N V ED++ V +A +G A
Sbjct: 174 FLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 40.0 bits (94), Expect = 8e-04
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 214 YLHSMNLIHRDLNSQNCLV---REDKTVVVADFGLAR 247
Y+HS N IHRD+ N L+ ++ V + DFGLA+
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM
domain EVH1 DO cell motility, phosphorylation,
cytoskeleton; 2.35A {Homo sapiens}
Length = 65
Score = 36.4 bits (84), Expect = 0.001
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 59 YGEACQNCGQMMS--GPVMVVGDHKFH--PECFKCTSCSCCIGDGESYALVERSILCSAC 114
+ CQ C + + + +H ECF C+ CS C+ G+ + VE + CS
Sbjct: 1 HAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLI-GQKFMPVEGMVFCSVE 59
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains;
zinc finger protein, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 82
Score = 36.1 bits (83), Expect = 0.002
Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 28/82 (34%)
Query: 60 GEACQNCGQMMSGPV-----MVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSAC 114
G+ C CG+ + + V H FH CF+C +C + G Y
Sbjct: 15 GDLCALCGE----HLYVLERLCVNGHFFHRSCFRCHTCEATLWPG-GYE----------- 58
Query: 115 DVMLDNWYFEKDGLLFCKEDYN 136
DG +C +
Sbjct: 59 -------QHPGDGHFYCLQHLP 73
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 35.3 bits (81), Expect = 0.031
Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
L+ L V + ++ E I L + + + I
Sbjct: 155 FRALQKLQGLAVPKVYAW----EGNAVLMELIDAKELYRVRVENPDEV--------LDMI 202
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ + ++H DL+ N LV E+ ++ DF + +
Sbjct: 203 LEEVAKFYHRGIVHGDLSQYNVLVSEEGIWII-DFPQS-VEVGEEGW 247
>4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine,
PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A
{Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A*
4ej7_A* 3r78_A*
Length = 272
Score = 33.9 bits (77), Expect = 0.073
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 5/107 (4%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
LR LH V + +L + G + D + ++V +++
Sbjct: 126 AVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV--WKEM 183
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ + + H D + N + E K + D G I R
Sbjct: 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI---ADRY 227
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 33.9 bits (77), Expect = 0.095
Identities = 8/36 (22%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
L H D+++ N LV ++++ + D+ + P+
Sbjct: 208 LCHSDIHAGNVLVGNEESIYIIDWDEPML---APKE 240
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 33.5 bits (76), Expect = 0.12
Identities = 13/107 (12%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 149 VAVLRSLHHHNVIRFIGVLYKDRKLNLVTEYIAGGTLKELLQDPGQPLPWGQRVNFARDI 208
+R H ++ D +L + + ++ + P+ +
Sbjct: 115 AECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFL 174
Query: 209 AAGMTYLHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ H DL N V++ K D G + +
Sbjct: 175 KTEKP-EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR---ADKW 217
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 32.3 bits (73), Expect = 0.27
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARI 248
L H+D + N L+ E++ + V D
Sbjct: 224 LCHQDYGTGNTLLGENEQIWVIDLDTVSF 252
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 31.9 bits (72), Expect = 0.28
Identities = 7/36 (19%), Positives = 10/36 (27%), Gaps = 5/36 (13%)
Query: 63 CQNCGQMMSGPVMVVGDHKFHPECFKCTSCSCCIGD 98
C C P +V + C C + D
Sbjct: 24 CPECK---VYPPKIVERFS-EGDVV-CALCGLVLSD 54
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 32.0 bits (72), Expect = 0.35
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARI 248
L+H D ++ N + R ++ V DFG +
Sbjct: 209 LVHNDFSANNMIFRNNRLFGVIDFGDFNV 237
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 31.5 bits (71), Expect = 0.39
Identities = 7/36 (19%), Positives = 11/36 (30%), Gaps = 3/36 (8%)
Query: 220 LIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ H D N +V + D G + R
Sbjct: 186 VTHGDACLPNIMVENGRFSGFIDCGRLGV---ADRY 218
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.1 bits (72), Expect = 0.39
Identities = 51/446 (11%), Positives = 116/446 (26%), Gaps = 128/446 (28%)
Query: 15 ENLRFLCRSSLIFTSGCSACDVMLD-----NWYFEKDGLLFCKEDYNGKYGEACQNCGQM 69
E L+ L I + S D + + + L + Y +NC
Sbjct: 200 EMLQKLLY--QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY--------ENC--- 246
Query: 70 MSGPVMVVGDHKFHPEC-----FKC----TSCSCCIGDGESYALVERSILCSACDVMLDN 120
++V + + + C T+ + D S A L +
Sbjct: 247 -----LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL------DHHS 295
Query: 121 WYFEKDGL--LFCKEDY-NGKYG----EACQ-NCGQVAVLRSLHHHNVIRFIGVLY--KD 170
D + L K Y + + E N +++++ + + + D
Sbjct: 296 MTLTPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 171 RKLNLVT---EYIAGGTLKELLQD-----PGQPLP-------WGQRV-NFARDIAAGMTY 214
+ ++ + +++ P +P W + + + +
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV---VNK 410
Query: 215 LHSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRAPTTVMAKVPRKAAQRRGAR 274
LH +L+ + ++ T+ + I+ + + R
Sbjct: 411 LHKYSLVEKQ--------PKESTISIPS------IYLELKVKLENEYALHRSIVDHYNIP 456
Query: 275 KKRYTVVGNP-------YWMAPEMMTGQEYDETVDVFSYGIVLCEIIGRVPADPDYLPRS 327
K + P Y + E+ E + +F V +L
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR----------MV-----FL--- 498
Query: 328 PDFGLDQTDF-RNKFCASCPEPFVRIAFLCCDLNPDQRPPFEVLEVWLEGLSMHLSVDKP 386
DF F K + L + + L+ + ++ + P
Sbjct: 499 -DF-----RFLEQKIRHDSTAWNASGSIL--NT-------LQQLKFYKP----YICDNDP 539
Query: 387 LPSDLEADIYQFATRKSASPLTEPEC 412
L I F + + +
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYT 565
>2az0_A B2 protein; protein-RNA complex, four-helix bundle, viral
protein/RNA complex; HET: 5BU; 2.60A {Flock house virus}
SCOP: a.30.8.1 PDB: 2az2_A* 2b9z_A
Length = 73
Score = 29.4 bits (65), Expect = 0.40
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 194 QPLPWGQRVNFARDIAAGMTYLHSMNLIHRDL-NSQNCLVREDKTV 238
Q LP R+ A + A GM+Y + N + RDL N CL + TV
Sbjct: 9 QELP--DRIQTAVEAAMGMSYQDAPNNVRRDLDNLHACLNKAKLTV 52
>3vbz_A Phospholipase A2 homolog, taipoxin beta chain; phospholipase A2
fold, PLA2 fold, neurotoxin, binding; 1.76A {Oxyuranus
scutellatus scutellatus} PDB: 3vc0_A
Length = 118
Score = 28.8 bits (64), Expect = 1.3
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALV--ERSILCSA 113
+ CG + G + D + H EC+ C +Y + C++
Sbjct: 21 DFMNYGCYCGTVGRGTPVDDLDRCCQVHDECYATAEKHGCYPSLTTYQWECRQVGNECNS 80
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme,
catalytic-site mutant, chemica hydrolase; 1.60A
{Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A
2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A*
1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Length = 436
Score = 30.0 bits (67), Expect = 1.7
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 376 GLSMHLSVDKPLPSDLEADIYQFATRKSASPLTEPECTAPTPA 418
G H + P S+ + FA +TE + + +
Sbjct: 203 GFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQGASSS 245
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger,
transferase-structural protein; 1.47A {Homo sapiens}
PDB: 2ln0_A
Length = 112
Score = 28.1 bits (62), Expect = 2.4
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 62 ACQNCGQ------MMSGPVMVVGDHKFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
+C +CG + P + V +C +C +CS C G++ + + C +CD
Sbjct: 28 SCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNA---DNMLFCDSCD 84
>2qhd_A Phospholipase A2; beta sheet, three helices, protein-ligand
complex, hydrolase; HET: DAO; 1.95A {Echis carinatus}
PDB: 2qhe_A 3bjw_A*
Length = 122
Score = 28.1 bits (62), Expect = 2.7
Identities = 12/57 (21%), Positives = 15/57 (26%), Gaps = 2/57 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCS 112
Y CG GP + D H C+ D Y I+C
Sbjct: 20 SYTSYGCFCGGGERGPPLDATDRCCLAHSCCYDTLPDCSPKTDRYKYKRENGEIICE 76
>4e4c_A Phospholipase A2; hydrolase; HET: MES; 1.80A {Notechis scutatus
scutatus} PDB: 1ae7_A* 2not_A
Length = 119
Score = 28.0 bits (62), Expect = 2.8
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESY--ALVERSILCS 112
Y + CG SG + D K H +C+ C +Y E C
Sbjct: 21 HYMDYGCYCGAGGSGTPVDELDRCCKIHDDCYDEAGKKGCFPKMSAYDYYCGENGPYCR 79
>1oz6_A Phospholipase A2; enzyme, PLA2, hydrolase; 2.60A {Echis carinatus}
SCOP: a.133.1.2
Length = 120
Score = 28.1 bits (62), Expect = 2.8
Identities = 13/57 (22%), Positives = 15/57 (26%), Gaps = 2/57 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCS 112
YG CG GP D H C+ SY I+C
Sbjct: 20 SYGSYGCYCGWGGQGPPKDATDRCCLVHDCCYTRVGDCSPKMTLYSYRFENGDIICD 76
>1n28_B Phospholipase A2, membrane associated; hydrolase; 1.50A {Homo
sapiens} SCOP: a.133.1.2 PDB: 1n29_A 1kvo_A* 1ayp_A
1db4_A* 1db5_A* 1dcy_A* 1j1a_A* 1bbc_A* 1kqu_A* 1pod_A
1poe_A*
Length = 124
Score = 28.0 bits (62), Expect = 3.2
Identities = 11/47 (23%), Positives = 13/47 (27%), Gaps = 2/47 (4%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESY 102
YG +CG G D C+K C SY
Sbjct: 20 SYGFYGCHCGVGGRGSPKDATDRCCVTQDCCYKRLEKRGCGTKFLSY 66
>1gp7_A Phospholipase A2; snake venom, KING cobra, cardiotoxic activity,
myotoxic activity, pancreatic loop, hydrolase, lipid
degradation, calcium; 2.6A {Ophiophagus hannah} SCOP:
a.133.1.2
Length = 151
Score = 28.1 bits (62), Expect = 3.6
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 10/65 (15%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKC-TSCSCCIGDGE-------SYALVER 107
KY + CG SG + D + H C+ C + SY ER
Sbjct: 48 KYADYGCYCGAGGSGTPVDKLDRCCQVHDNCYTQAQKLPACSSIMDSPYVKIYSYDCSER 107
Query: 108 SILCS 112
++ C
Sbjct: 108 TVTCK 112
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente
structural genomics, JCSG, protein structure initiative,
PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}
Length = 352
Score = 28.6 bits (64), Expect = 3.8
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 218 MNLIHRDLNSQNCLVREDK-TVVVADFG-LARIIHQGPRAPTT 258
M ++ + + + D + + G LA+++ QG T+
Sbjct: 2 MTILSD-VKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTS 43
>1vip_A Phospholipase A2; hydrolase, anticoagulant; 2.20A {Daboia russellii
russellii} SCOP: a.133.1.2
Length = 121
Score = 27.7 bits (61), Expect = 3.9
Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCS 112
Y + CG G D H C++ SY+ I+C
Sbjct: 20 SYSDYGCYCGWGGKGKPQDATDRCCFVHDCCYEKVKSCKPKLSLYSYSFQNGGIVCG 76
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 28.8 bits (63), Expect = 4.0
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 216 HSMNLIHRDLNSQNCLVREDKTVVVADFGLARIIHQGPRA 255
+ LIH DL++ + +V +D T V+ D + GP
Sbjct: 230 RAQALIHGDLHTGSVMVTQDSTQVI-DPEFSFY---GPMG 265
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 28.2 bits (63), Expect = 4.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 220 LIHRDLNSQNCLVREDKTVVVA--DFGLARI 248
LIH D +S + L +K + DFG A I
Sbjct: 193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223
>1gmz_A Phospholipase A2; hydrolase, neurotoxic; 2.4A {Bothrops pirajai}
SCOP: a.133.1.2
Length = 122
Score = 27.3 bits (60), Expect = 4.6
Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
Y CG G D H C+ + D SY+ + +I+C D
Sbjct: 20 YYVTYGCYCGVGGRGGPKDATDRCCFVHDCCYGKLTSCKPKTDRYSYSRKDGTIVCGEND 79
>3dih_A Phospholipase A2 homolog, ammodytin L; phospholipase A2 fold,
myotoxin, secreted, toxin; 2.60A {Vipera ammodytes
ammodytes} PDB: 3ux7_A
Length = 122
Score = 26.9 bits (59), Expect = 6.1
Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
Y +CG G D H C+ S + Y +I+C +
Sbjct: 20 SYSFYGCHCGLGNKGKPKDATDRCCFVHSCCYAKLSDCSPKTNRYEYHRENGAIVCGSST 79
>3r0l_D Phospholipase A2 CB; crotoxin, presynaptic neurotoxin, snake venom,
phospholipase heterodimer interface, hydrolase; 1.35A
{Crotalus durissus terrificus} PDB: 2qog_B 2qog_A 1bjj_A
1a2a_A
Length = 122
Score = 27.0 bits (59), Expect = 6.8
Identities = 12/60 (20%), Positives = 15/60 (25%), Gaps = 2/60 (3%)
Query: 58 KYGEACQNCGQMMSGPVMVVGDH--KFHPECFKCTSCSCCIGDGESYALVERSILCSACD 115
Y CG G D H C+ + D Y+L I C
Sbjct: 20 FYAFYGCYCGWGGQGRPKDATDRCCFVHDCCYGKLAKCNTKWDIYRYSLKSGYITCGKGT 79
>1g4i_A Phospholipase A2; lipid degradation, hydrolase; 0.97A {Bos taurus}
SCOP: a.133.1.2 PDB: 1bvm_A 1fdk_A* 1bp2_A 1mkt_A
1mkv_A* 1une_A 2bpp_A 4bp2_A 2bp2_A 1kvy_A 1bpq_A 2zp3_A
1ceh_A 3bp2_A 2zp5_A 1kvx_A 1kvw_A 2zp4_A 1irb_A 2bax_A*
...
Length = 123
Score = 26.9 bits (59), Expect = 7.2
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Query: 59 YGEACQNCGQMMSGPVMVVGDH--KFHPECFKC-TSCSCCIGDGESYALVERSILCSACD 115
+ CG SG + D + H C+K C ++ S CS +
Sbjct: 22 FNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNE 81
Query: 116 V 116
+
Sbjct: 82 I 82
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 27.7 bits (61), Expect = 7.4
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Query: 175 LVTEYIAGGTLKEL-LQDPGQPLPWGQRVNFARDIAAGMTYLHS-MNLIHRDLNSQNCLV 232
L+ E+I L L + G+ L D+ + L+ L+H DL+ N +
Sbjct: 145 LLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY 204
Query: 233 REDKTVVVADFGLA 246
V D G A
Sbjct: 205 --IDKVYFIDMGQA 216
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG,
PSI, protein structure initiative, joint center for S
genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2
c.2.1.1
Length = 380
Score = 27.6 bits (62), Expect = 8.1
Identities = 5/19 (26%), Positives = 6/19 (31%), Gaps = 3/19 (15%)
Query: 77 VGDH---KFHPECFKCTSC 92
GD C +C C
Sbjct: 100 PGDLIVWNRGITCGECYWC 118
>3npk_A Geranyltranstransferase; isoprene biosynthesis, SGX, structural
genomics protein structure initiative; 1.50A
{Campylobacter jejuni}
Length = 291
Score = 27.6 bits (62), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 199 GQRVNFARDIAAGMTYLHSMNLIHRDL 225
+ +N A D+A + ++H+ +LIH DL
Sbjct: 56 PELLNQALDVALALEFIHTYSLIHDDL 82
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.445
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,008,112
Number of extensions: 440521
Number of successful extensions: 2109
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1405
Number of HSP's successfully gapped: 471
Length of query: 433
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 337
Effective length of database: 4,021,377
Effective search space: 1355204049
Effective search space used: 1355204049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.6 bits)