BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6595
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|391330552|ref|XP_003739722.1| PREDICTED: proteasome subunit alpha type-4-like [Metaseiulus
occidentalis]
Length = 267
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGI+LA+E+RNTNKLLDE TS
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATDGIVLASERRNTNKLLDEVFTS 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|91087493|ref|XP_968456.1| PREDICTED: similar to proteasome alpha 4 subunit [Tribolium
castaneum]
gi|270009464|gb|EFA05912.1| hypothetical protein TcasGA2_TC008727 [Tribolium castaneum]
Length = 258
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGILLAAE+RNTNKLLDE TS
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAERRNTNKLLDEVFTS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|346469211|gb|AEO34450.1| hypothetical protein [Amblyomma maculatum]
Length = 264
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGILLAAE+RNTNKLLDE T+
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGILLAAERRNTNKLLDEVFTA 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|427785111|gb|JAA58007.1| Putative 20s proteasome regulatory subunit alpha type psma4/pre9
[Rhipicephalus pulchellus]
Length = 265
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGILLAAE+RNTNKLLDE T+
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGILLAAERRNTNKLLDEVFTA 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|442758861|gb|JAA71589.1| Putative 20s proteasome regulatory subunit alpha type psma4/pre9
[Ixodes ricinus]
Length = 262
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI+LAAE+RNTNKLLDE T+
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVLAAERRNTNKLLDEVFTA 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|322801291|gb|EFZ21978.1| hypothetical protein SINV_09740 [Solenopsis invicta]
Length = 257
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGILLAAEKRNTNKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDI 72
>gi|332029633|gb|EGI69522.1| Proteasome subunit alpha type-4 [Acromyrmex echinatior]
Length = 470
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISHAGTCLGILA DGILLAAEKRNTNKLLDE SEKIYKL+D
Sbjct: 225 FSPE-GRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLND 283
Query: 103 SL 104
+
Sbjct: 284 DI 285
>gi|307186251|gb|EFN71914.1| Proteasome subunit alpha type-4 [Camponotus floridanus]
Length = 490
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISHAGTCLGILA DGILL AEKRNTNKLLDE SEKIYKL+D
Sbjct: 245 FSPE-GRLYQVEYAMEAISHAGTCLGILANDGILLVAEKRNTNKLLDEVFFSEKIYKLND 303
Query: 103 SL 104
+
Sbjct: 304 DI 305
>gi|156552814|ref|XP_001600177.1| PREDICTED: proteasome subunit alpha type-4-like [Nasonia
vitripennis]
Length = 257
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGILLAAEKRNTNKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDV 72
>gi|289742271|gb|ADD19883.1| 20S proteasome regulatory subunit alpha type PSMA4/PRE9 [Glossina
morsitans morsitans]
Length = 261
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGTCLGILA+DGILLAAE RNTNKLLD SEKIYKL+
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRNTNKLLDGSIFSEKIYKLN 69
Query: 102 DSL 104
D++
Sbjct: 70 DNM 72
>gi|326526665|dbj|BAK00721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+EAISHAGT LGILA DGILLAAEKRNTNKLLDE + SEKIYKL+D
Sbjct: 12 FSPE-GRLYQVEYALEAISHAGTSLGILASDGILLAAEKRNTNKLLDEVSYSEKIYKLND 70
Query: 103 SL 104
L
Sbjct: 71 DL 72
>gi|53148461|dbj|BAD52258.1| proteasome alpha 4 subunit [Plutella xylostella]
Length = 257
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA DGILLAAE+RNTNKLLDE +S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFSS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|260804394|ref|XP_002597073.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
gi|229282335|gb|EEN53085.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
Length = 262
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI+LAAE+RNT+KLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGIVLAAERRNTHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|340384350|ref|XP_003390676.1| PREDICTED: proteasome subunit alpha type-4-like [Amphimedon
queenslandica]
Length = 263
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA+DG+LLAAE++NTNKLLD+ S
Sbjct: 3 RRYDTKTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGVLLAAERKNTNKLLDDVFLS 62
Query: 95 EKIYKLHDSL 104
EKIY+LHD++
Sbjct: 63 EKIYRLHDNM 72
>gi|242012576|ref|XP_002427007.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
gi|212511245|gb|EEB14269.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
Length = 294
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAEKRN NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAKDGILLAAEKRNINKLLDEVVFS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYQLNENM 72
>gi|193666831|ref|XP_001943723.1| PREDICTED: proteasome subunit alpha type-4-like [Acyrthosiphon
pisum]
Length = 271
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGTCLGIL DG+LLAAEKRN NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAIEAISHAGTCLGILTNDGVLLAAEKRNVNKLLDETCGS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|240848541|ref|NP_001155462.1| proteasome alpha 4 subunit-like [Acyrthosiphon pisum]
gi|239788330|dbj|BAH70853.1| ACYPI002153 [Acyrthosiphon pisum]
Length = 272
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGTCLGIL DG+LLAAEKRN NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAIEAISHAGTCLGILTNDGVLLAAEKRNVNKLLDETCGS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|195346263|ref|XP_002039685.1| GM15792 [Drosophila sechellia]
gi|195585260|ref|XP_002082407.1| GD11553 [Drosophila simulans]
gi|194135034|gb|EDW56550.1| GM15792 [Drosophila sechellia]
gi|194194416|gb|EDX07992.1| GD11553 [Drosophila simulans]
Length = 264
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAVPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L+D++
Sbjct: 63 EKIYRLNDNM 72
>gi|17136420|ref|NP_476691.1| proteasome 29kD subunit [Drosophila melanogaster]
gi|12643270|sp|P18053.2|PSA4_DROME RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=PROS-Dm29; AltName: Full=Proteasome 29 kDa subunit
gi|7291219|gb|AAF46651.1| proteasome 29kD subunit [Drosophila melanogaster]
gi|19527527|gb|AAL89878.1| RE23862p [Drosophila melanogaster]
gi|220948176|gb|ACL86631.1| Pros29-PA [synthetic construct]
gi|220957410|gb|ACL91248.1| Pros29-PA [synthetic construct]
Length = 264
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L+D++
Sbjct: 63 EKIYRLNDNM 72
>gi|194881750|ref|XP_001974984.1| GG22074 [Drosophila erecta]
gi|195486683|ref|XP_002091609.1| GE12155 [Drosophila yakuba]
gi|190658171|gb|EDV55384.1| GG22074 [Drosophila erecta]
gi|194177710|gb|EDW91321.1| GE12155 [Drosophila yakuba]
Length = 264
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L+D++
Sbjct: 63 EKIYRLNDNM 72
>gi|389609297|dbj|BAM18260.1| proteasome 29kD subunit [Papilio xuthus]
Length = 257
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA DGILLAAE+RNTNKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|357603122|gb|EHJ63634.1| proteasome alpha 4 subunit [Danaus plexippus]
Length = 257
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA DGILLAAE+RNTNKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|332376146|gb|AEE63213.1| unknown [Dendroctonus ponderosae]
Length = 259
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAIS AGTCLGILA DGILL AE+RNTNKLLDE TS
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISLAGTCLGILANDGILLVAERRNTNKLLDEVFTS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|157125112|ref|XP_001660626.1| proteasome subunit alpha type [Aedes aegypti]
gi|108873757|gb|EAT37982.1| AAEL010087-PA [Aedes aegypti]
Length = 261
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA+DGILLAAE+RNTNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDSVIFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|158293714|ref|XP_315057.4| AGAP004960-PA [Anopheles gambiae str. PEST]
gi|157016578|gb|EAA10351.5| AGAP004960-PA [Anopheles gambiae str. PEST]
Length = 259
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA+DGILLAAE+RNTNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDNVIFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|350409351|ref|XP_003488705.1| PREDICTED: hypothetical protein LOC100745131 [Bombus impatiens]
Length = 642
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 10/79 (12%)
Query: 35 KRLNQDFS---------FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTN 85
K++ QD + F P RLYQVEYAMEAISHAGTCLGILA DG+LL AE+RN N
Sbjct: 380 KKMTQDLARRYDTRTTIFSPE-GRLYQVEYAMEAISHAGTCLGILATDGVLLVAERRNIN 438
Query: 86 KLLDEGTTSEKIYKLHDSL 104
KLLDE SEKIYKL+D +
Sbjct: 439 KLLDEVYYSEKIYKLNDDI 457
>gi|170050622|ref|XP_001861393.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
gi|167872194|gb|EDS35577.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
Length = 261
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGT LGILA+DGILLAAE+RNTNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDSVIFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|340713585|ref|XP_003395322.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Bombus
terrestris]
gi|340713587|ref|XP_003395323.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Bombus
terrestris]
Length = 257
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DG+LL AE+RN NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATDGVLLVAERRNINKLLDEVYYS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDI 72
>gi|383859475|ref|XP_003705220.1| PREDICTED: uncharacterized protein LOC100875492 [Megachile
rotundata]
Length = 610
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 50/56 (89%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYAMEAISHAGTC+GILA DG+LL AE+RNTNKLLDE SEKIYKL+D +
Sbjct: 370 RLYQVEYAMEAISHAGTCVGILATDGVLLVAERRNTNKLLDEVHYSEKIYKLNDDI 425
>gi|125811518|ref|XP_001361901.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
gi|54637077|gb|EAL26480.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
Length = 262
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|195170248|ref|XP_002025925.1| GL10139 [Drosophila persimilis]
gi|194110789|gb|EDW32832.1| GL10139 [Drosophila persimilis]
Length = 262
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|195455623|ref|XP_002074799.1| GK22956 [Drosophila willistoni]
gi|194170884|gb|EDW85785.1| GK22956 [Drosophila willistoni]
Length = 262
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDNAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|195027167|ref|XP_001986455.1| GH20521 [Drosophila grimshawi]
gi|193902455|gb|EDW01322.1| GH20521 [Drosophila grimshawi]
Length = 263
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGI+LAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAIPS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++++
Sbjct: 63 EKIYKLNENM 72
>gi|239788585|dbj|BAH70965.1| ACYPI006981 [Acyrthosiphon pisum]
Length = 271
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAG CLGIL DG+LLAAEKRN NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAIEAISHAGACLGILTNDGVLLAAEKRNVNKLLDETCGS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|194753670|ref|XP_001959133.1| GF12213 [Drosophila ananassae]
gi|190620431|gb|EDV35955.1| GF12213 [Drosophila ananassae]
Length = 265
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|8380|emb|CAA36555.1| unnamed protein product [Drosophila melanogaster]
Length = 264
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+ +D++
Sbjct: 63 EKIYRRNDNM 72
>gi|380011487|ref|XP_003689834.1| PREDICTED: uncharacterized protein LOC100870087 [Apis florea]
Length = 528
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISHAGTCLGILA +GILL AE+RN NKLLDE SEKIYKL+D
Sbjct: 283 FSPE-GRLYQVEYAMEAISHAGTCLGILATNGILLVAERRNINKLLDEVYYSEKIYKLND 341
Query: 103 SL 104
+
Sbjct: 342 DI 343
>gi|195123961|ref|XP_002006470.1| GI21067 [Drosophila mojavensis]
gi|193911538|gb|EDW10405.1| GI21067 [Drosophila mojavensis]
Length = 263
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGI+LAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|195382892|ref|XP_002050162.1| GJ21990 [Drosophila virilis]
gi|194144959|gb|EDW61355.1| GJ21990 [Drosophila virilis]
Length = 263
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGI+LAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAIPS 62
Query: 95 EKIYKLHDSL 104
EKIY+L++++
Sbjct: 63 EKIYRLNENM 72
>gi|148227030|ref|NP_001089811.1| uncharacterized protein LOC734876 [Xenopus laevis]
gi|76779672|gb|AAI06639.1| MGC132180 protein [Xenopus laevis]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|392877408|gb|AFM87536.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|392878408|gb|AFM88036.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|387914280|gb|AFK10749.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|349804897|gb|AEQ17921.1| hypothetical protein [Hymenochirus curtipes]
Length = 212
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + +R YQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 7 RRYDSRTTIFSPKARFYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 66
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 67 EKIYKLNDDM 76
>gi|410912399|ref|XP_003969677.1| PREDICTED: proteasome subunit alpha type-4-like [Takifugu rubripes]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|56118656|ref|NP_001007998.1| proteasome alpha 4 subunit [Xenopus (Silurana) tropicalis]
gi|51703820|gb|AAH80876.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
(Silurana) tropicalis]
gi|89266778|emb|CAJ83532.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
(Silurana) tropicalis]
Length = 261
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|324522490|gb|ADY48068.1| Proteasome subunit alpha type-4 [Ascaris suum]
Length = 250
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLA 62
Query: 95 EKIYKLHDSL 104
EKIY+L D++
Sbjct: 63 EKIYRLSDNI 72
>gi|324523660|gb|ADY48280.1| Proteasome subunit alpha type-4, partial [Ascaris suum]
Length = 260
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLA 62
Query: 95 EKIYKLHDSL 104
EKIY+L D++
Sbjct: 63 EKIYRLSDNI 72
>gi|443698150|gb|ELT98287.1| hypothetical protein CAPTEDRAFT_152113 [Capitella teleta]
Length = 263
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI+LAAEKR+TNKLLDE + S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILATDGIVLAAEKRSTNKLLDEVSFS 62
Query: 95 EKIYKLHDSL 104
EKIY L++ +
Sbjct: 63 EKIYILYEDM 72
>gi|189054923|dbj|BAG37907.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEAFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|47230708|emb|CAF99901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 573
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 61
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 62 EKIYKLNDDM 71
>gi|229367772|gb|ACQ58866.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
Length = 261
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE + S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVSFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|393906563|gb|EFO25300.2| proteasome subunit alpha type-4 [Loa loa]
Length = 250
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLT 62
Query: 95 EKIYKLHDSL 104
EKIY+L D++
Sbjct: 63 EKIYRLADNI 72
>gi|321456911|gb|EFX68008.1| hypothetical protein DAPPUDRAFT_231772 [Daphnia pulex]
Length = 257
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI+LAAE+RNTNKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVLAAERRNTNKLLDEVFFS 62
Query: 95 EKIYKLH 101
EKIY+L+
Sbjct: 63 EKIYQLN 69
>gi|37654720|gb|AAQ96654.1| proteasome alpha 4 subunit [Branchiostoma belcheri tsingtauense]
Length = 262
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGT LGILA DGI+LAAE+RNT+KLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTRLGILANDGIVLAAERRNTHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKLHD +
Sbjct: 63 EKIYKLHDDM 72
>gi|74151744|dbj|BAE29663.1| unnamed protein product [Mus musculus]
Length = 261
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ L
Sbjct: 63 EKIYKLNEDL 72
>gi|291230768|ref|XP_002735337.1| PREDICTED: proteasome alpha 4 subunit-like [Saccoglossus
kowalevskii]
Length = 277
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 16 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGVLLAAERRNIHKLLDEVFFS 75
Query: 95 EKIYKLHDSL 104
EKIYKL D +
Sbjct: 76 EKIYKLTDDM 85
>gi|147905508|ref|NP_001080690.1| proteasome alpha 4 subunit [Xenopus laevis]
gi|27924191|gb|AAH44983.1| Psma4-prov protein [Xenopus laevis]
Length = 261
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLD+ S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDDVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D +
Sbjct: 63 EKIYKLNDDM 72
>gi|402582940|gb|EJW76885.1| proteasome subunit beta type, partial [Wuchereria bancrofti]
Length = 168
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +
Sbjct: 2 RRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLT 61
Query: 95 EKIYKLHDSL 104
EKIY+L D++
Sbjct: 62 EKIYRLADNI 71
>gi|328793299|ref|XP_397196.4| PREDICTED: hypothetical protein LOC413757 [Apis mellifera]
Length = 622
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 49/56 (87%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYAMEAISHAGTCLGILA +GILL AE+RN NKLLDE SEKIYKL+D +
Sbjct: 382 RLYQVEYAMEAISHAGTCLGILATNGILLVAERRNINKLLDEVYYSEKIYKLNDDI 437
>gi|332252665|ref|XP_003275474.1| PREDICTED: proteasome subunit alpha type-4 [Nomascus leucogenys]
Length = 245
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|167524615|ref|XP_001746643.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774913|gb|EDQ88539.1| predicted protein [Monosiga brevicollis MX1]
Length = 263
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISHAGTCLGILA+DGILLAAEK++ KLLD+ + +EKIYKL D
Sbjct: 12 FSPE-GRLYQVEYAMEAISHAGTCLGILAKDGILLAAEKKHVAKLLDQSSAAEKIYKLDD 70
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 42/58 (72%), Gaps = 9/58 (15%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAI 60
RLYQVEYAMEAISHAGTCLGILA+DGILLAAEK+ H+++L A E I
Sbjct: 17 RLYQVEYAMEAISHAGTCLGILAKDGILLAAEKK---------HVAKLLDQSSAAEKI 65
>gi|74177575|dbj|BAE38897.1| unnamed protein product [Mus musculus]
Length = 249
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|6755196|ref|NP_036096.1| proteasome subunit alpha type-4 [Mus musculus]
gi|9910830|sp|Q9R1P0.1|PSA4_MOUSE RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|378792304|pdb|3UNB|B Chain B, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792318|pdb|3UNB|P Chain P, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792332|pdb|3UNB|DD Chain d, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792346|pdb|3UNB|RR Chain r, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792360|pdb|3UNE|B Chain B, Mouse Constitutive 20s Proteasome
gi|378792374|pdb|3UNE|P Chain P, Mouse Constitutive 20s Proteasome
gi|378792388|pdb|3UNE|DD Chain d, Mouse Constitutive 20s Proteasome
gi|378792402|pdb|3UNE|RR Chain r, Mouse Constitutive 20s Proteasome
gi|378792416|pdb|3UNF|B Chain B, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792430|pdb|3UNF|P Chain P, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792444|pdb|3UNH|B Chain B, Mouse 20s Immunoproteasome
gi|378792458|pdb|3UNH|P Chain P, Mouse 20s Immunoproteasome
gi|5757663|gb|AAD50538.1|AF060093_1 proteasome subunit C9 [Mus musculus]
gi|12805051|gb|AAH01982.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Mus
musculus]
gi|26351873|dbj|BAC39573.1| unnamed protein product [Mus musculus]
gi|74207746|dbj|BAE40115.1| unnamed protein product [Mus musculus]
gi|148693889|gb|EDL25836.1| mCG9679 [Mus musculus]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|38649313|gb|AAH63170.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Rattus
norvegicus]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|8394069|ref|NP_058977.1| proteasome subunit alpha type-4 [Rattus norvegicus]
gi|130862|sp|P21670.1|PSA4_RAT RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|56641|emb|CAA39458.1| multicatalytic proteinase subunit L [Rattus rattus]
gi|57000|emb|CAA37390.1| unnamed protein product [Rattus norvegicus]
gi|149041716|gb|EDL95557.1| proteasome (prosome, macropain) subunit, alpha type 4, isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|4506185|ref|NP_002780.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
gi|77735717|ref|NP_001029553.1| proteasome subunit alpha type-4 [Bos taurus]
gi|156713442|ref|NP_001096137.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
gi|347300165|ref|NP_001231397.1| proteasome subunit alpha type-4 [Sus scrofa]
gi|383873360|ref|NP_001244491.1| proteasome subunit alpha type-4 [Macaca mulatta]
gi|114658352|ref|XP_001150677.1| PREDICTED: proteasome subunit alpha type-4 isoform 10 [Pan
troglodytes]
gi|114658354|ref|XP_001150746.1| PREDICTED: proteasome subunit alpha type-4 isoform 11 [Pan
troglodytes]
gi|114658360|ref|XP_001151019.1| PREDICTED: proteasome subunit alpha type-4 isoform 13 [Pan
troglodytes]
gi|296223921|ref|XP_002757825.1| PREDICTED: proteasome subunit alpha type-4-like [Callithrix
jacchus]
gi|296228626|ref|XP_002759892.1| PREDICTED: proteasome subunit alpha type-4 [Callithrix jacchus]
gi|297697231|ref|XP_002825769.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Pongo abelii]
gi|297697233|ref|XP_002825770.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Pongo abelii]
gi|332844466|ref|XP_003314855.1| PREDICTED: proteasome subunit alpha type-4 [Pan troglodytes]
gi|397485457|ref|XP_003813862.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Pan paniscus]
gi|397485459|ref|XP_003813863.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Pan paniscus]
gi|402875025|ref|XP_003901321.1| PREDICTED: proteasome subunit alpha type-4 [Papio anubis]
gi|426248232|ref|XP_004017868.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Ovis aries]
gi|426379953|ref|XP_004056651.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Gorilla
gorilla gorilla]
gi|426379955|ref|XP_004056652.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Gorilla
gorilla gorilla]
gi|130861|sp|P25789.1|PSA4_HUMAN RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|122140948|sp|Q3ZCK9.1|PSA4_BOVIN RecName: Full=Proteasome subunit alpha type-4
gi|21465644|pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465658|pdb|1IRU|Q Chain Q, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|220030|dbj|BAA00660.1| proteasome subunit C9 [Homo sapiens]
gi|13529191|gb|AAH05361.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|18490884|gb|AAH22445.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|28839483|gb|AAH47667.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|32879911|gb|AAP88786.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|61361191|gb|AAX42008.1| proteasome subunit alpha type 4 [synthetic construct]
gi|67970776|dbj|BAE01730.1| unnamed protein product [Macaca fascicularis]
gi|73586888|gb|AAI02103.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Bos taurus]
gi|119619569|gb|EAW99163.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
CRA_a [Homo sapiens]
gi|119619570|gb|EAW99164.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
CRA_a [Homo sapiens]
gi|123983547|gb|ABM83465.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|123998149|gb|ABM86676.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|261859964|dbj|BAI46504.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|296475399|tpg|DAA17514.1| TPA: proteasome subunit alpha type-4 [Bos taurus]
gi|380814776|gb|AFE79262.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|383420081|gb|AFH33254.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|384948312|gb|AFI37761.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|410252478|gb|JAA14206.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
gi|410287352|gb|JAA22276.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
gi|410333277|gb|JAA35585.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|421975964|gb|AFX73014.1| proteasome subunit alpha type 4 Spirometra erinaceieuropaei
[Spirometra erinaceieuropaei]
Length = 247
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEA+ HAGTCLGI+A+DGI+LAAEKR NKLLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINKLLDETAFS 62
Query: 95 EKIYKLHDSL 104
EKIYK++D +
Sbjct: 63 EKIYKINDDI 72
>gi|73921826|sp|Q4R932.1|PSA4_MACFA RecName: Full=Proteasome subunit alpha type-4
gi|67967814|dbj|BAE00389.1| unnamed protein product [Macaca fascicularis]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|334313721|ref|XP_001376636.2| PREDICTED: proteasome subunit alpha type-4-like [Monodelphis
domestica]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|149633630|ref|XP_001511366.1| PREDICTED: proteasome subunit alpha type-4-like [Ornithorhynchus
anatinus]
gi|395501100|ref|XP_003754936.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Sarcophilus
harrisii]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|47550827|ref|NP_999862.1| proteasome subunit alpha type-4 [Danio rerio]
gi|28279709|gb|AAH45970.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Danio
rerio]
gi|182891032|gb|AAI64668.1| Psma4 protein [Danio rerio]
Length = 261
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|34783332|gb|AAH22817.2| PSMA4 protein, partial [Homo sapiens]
Length = 260
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 61
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 62 EKIYKLNEDM 71
>gi|344284067|ref|XP_003413792.1| PREDICTED: proteasome subunit alpha type-4-like [Loxodonta
africana]
Length = 307
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 49 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 108
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 109 EKIYKLNEDM 118
>gi|221219640|gb|ACM08481.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|149041717|gb|EDL95558.1| proteasome (prosome, macropain) subunit, alpha type 4, isoform
CRA_b [Rattus norvegicus]
Length = 235
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ L
Sbjct: 63 EKIYKLNEYL 72
>gi|403304913|ref|XP_003943023.1| PREDICTED: proteasome subunit alpha type-4 [Saimiri boliviensis
boliviensis]
Length = 261
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|291410735|ref|XP_002721651.1| PREDICTED: proteasome alpha 4 subunit-like [Oryctolagus cuniculus]
Length = 306
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 48 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 107
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 108 EKIYKLNEDM 117
>gi|229367458|gb|ACQ58709.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
Length = 261
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|354471447|ref|XP_003497954.1| PREDICTED: proteasome subunit alpha type-4-like [Cricetulus
griseus]
gi|344247650|gb|EGW03754.1| Proteasome subunit alpha type-4 [Cricetulus griseus]
Length = 261
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|351697795|gb|EHB00714.1| Proteasome subunit alpha type-4, partial [Heterocephalus glaber]
gi|355692916|gb|EHH27519.1| Proteasome subunit alpha type-4, partial [Macaca mulatta]
gi|355778226|gb|EHH63262.1| Proteasome subunit alpha type-4, partial [Macaca fascicularis]
gi|440912779|gb|ELR62316.1| Proteasome subunit alpha type-4, partial [Bos grunniens mutus]
Length = 261
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|410960409|ref|XP_003986782.1| PREDICTED: proteasome subunit alpha type-4 [Felis catus]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|301775280|ref|XP_002923048.1| PREDICTED: proteasome subunit alpha type-4-like [Ailuropoda
melanoleuca]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|226358649|gb|ACO51177.1| proteasome (prosome, macropain) subunit alpha type 4
[Hypophthalmichthys nobilis]
Length = 97
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|432851211|ref|XP_004066910.1| PREDICTED: proteasome subunit alpha type-4-like [Oryzias latipes]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|225716624|gb|ACO14158.1| Proteasome subunit alpha type-4 [Esox lucius]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|350535088|ref|NP_001232410.1| putative Proteasome subunit alpha type 4 [Taeniopygia guttata]
gi|197127389|gb|ACH43887.1| putative Proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|310750337|ref|NP_001185531.1| proteasome subunit alpha type-4 [Gallus gallus]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|197127388|gb|ACH43886.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|335773320|gb|AEH58353.1| proteasome subunit alpha type-4-like protein, partial [Equus
caballus]
Length = 125
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|332213470|ref|XP_003255848.1| PREDICTED: proteasome subunit alpha type-4-like [Nomascus
leucogenys]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRATIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|348526654|ref|XP_003450834.1| PREDICTED: proteasome subunit alpha type-4-like [Oreochromis
niloticus]
Length = 261
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|449281518|gb|EMC88575.1| Proteasome subunit alpha type-4 [Columba livia]
Length = 267
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 9 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 68
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 69 EKIYKLNEDM 78
>gi|281350262|gb|EFB25846.1| hypothetical protein PANDA_012136 [Ailuropoda melanoleuca]
Length = 210
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|348555661|ref|XP_003463642.1| PREDICTED: proteasome subunit alpha type-4-like [Cavia porcellus]
Length = 323
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 65 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 124
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 125 EKIYKLNEDM 134
>gi|431920325|gb|ELK18360.1| Proteasome subunit alpha type-4 [Pteropus alecto]
Length = 287
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 29 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 88
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 89 EKIYKLNEDM 98
>gi|225704660|gb|ACO08176.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|226489759|emb|CAX75030.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 243
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%)
Query: 39 QDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
Q F RLYQVEYAMEA+ HAGTCLGI+A+DGI+LAAEKR N LLDE SEKIY
Sbjct: 3 QGRRFFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETVFSEKIY 62
Query: 99 KLHDSL 104
K++D +
Sbjct: 63 KINDDI 68
>gi|197127387|gb|ACH43885.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 184
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|432097273|gb|ELK27607.1| Proteasome subunit alpha type-4 [Myotis davidii]
Length = 289
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE SEKIYKL++
Sbjct: 40 FSPE-GRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNE 98
Query: 103 SL 104
+
Sbjct: 99 DM 100
>gi|355713998|gb|AES04855.1| proteasome subunit, alpha type, 4 [Mustela putorius furo]
Length = 173
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 7 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 66
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 67 EKIYKLNEDM 76
>gi|387017838|gb|AFJ51037.1| Proteasome subunit alpha type-4 [Crotalus adamanteus]
Length = 261
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+ +
Sbjct: 63 EKIYKLNQDM 72
>gi|320168981|gb|EFW45880.1| proteasome alpha 4 subunit [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 15 SHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDG 74
SH L + LLAA + ++ F P RLYQVEYAMEAISHAGTCLGIL +G
Sbjct: 3 SHDRPALDPPPKTLCLLAAHRYDSRTTIFSPE-GRLYQVEYAMEAISHAGTCLGILTSEG 61
Query: 75 ILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
I++AAE+R T+KLL++ + SEKIYKL+D +
Sbjct: 62 IIIAAERRVTSKLLEQNSLSEKIYKLNDHM 91
>gi|444730289|gb|ELW70676.1| Proteasome subunit alpha type-4 [Tupaia chinensis]
Length = 289
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE SEKIYKL++ +
Sbjct: 45 RLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDM 100
>gi|326926468|ref|XP_003209422.1| PREDICTED: aminoglycoside phosphotransferase domain-containing
protein 1-like [Meleagris gallopavo]
Length = 635
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 377 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFS 436
Query: 95 EKIYKLHDSL 104
EKIY+L++ +
Sbjct: 437 EKIYRLNEDM 446
>gi|226489757|emb|CAX75029.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 240
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEA+ HAGTCLGI+A+DGI+LAAEKR N LLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETVFS 62
Query: 95 EKIYKLHDSL 104
EKIYK++D +
Sbjct: 63 EKIYKINDDI 72
>gi|226489755|emb|CAX75028.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
gi|226489761|emb|CAX75031.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 247
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEA+ HAGTCLGI+A+DGI+LAAEKR N LLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETVFS 62
Query: 95 EKIYKLHDSL 104
EKIYK++D +
Sbjct: 63 EKIYKINDDI 72
>gi|225704204|gb|ACO07948.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+CLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|209735488|gb|ACI68613.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+CLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|209733720|gb|ACI67729.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+CLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|197632223|gb|ACH70835.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Salmo
salar]
gi|209734114|gb|ACI67926.1| Proteasome subunit alpha type-4 [Salmo salar]
gi|225704770|gb|ACO08231.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+CLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|213510924|ref|NP_001134515.1| Proteasome subunit alpha type-4 [Salmo salar]
gi|209733934|gb|ACI67836.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+CLGILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|256084130|ref|XP_002578285.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
gi|350644352|emb|CCD60901.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
Length = 247
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEA+ HAGTCLG++A+DGI+LAAEKR N LLDE S
Sbjct: 3 RRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGVVAKDGIVLAAEKRFINNLLDETVFS 62
Query: 95 EKIYKLHDSL 104
EKIYK++D +
Sbjct: 63 EKIYKINDDI 72
>gi|225703170|gb|ACO07431.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+R+ +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRSIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI HAGTCLGILA DG+LLAAE+R
Sbjct: 17 RLYQVEYAMEAIGHAGTCLGILANDGVLLAAERR 50
>gi|449670290|ref|XP_002166397.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit alpha
type-4-like [Hydra magnipapillata]
Length = 221
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYAMEAISHAGTCLGILA DG++LAAE+RNTNKLLD+ S+KIYKL +
Sbjct: 12 FSPE-GRLFQVEYAMEAISHAGTCLGILATDGVVLAAERRNTNKLLDD-VLSDKIYKLDE 69
Query: 103 S 103
+
Sbjct: 70 N 70
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYAMEAISHAGTCLGILA DG++LAAE+R
Sbjct: 17 RLFQVEYAMEAISHAGTCLGILATDGVVLAAERR 50
>gi|255717723|ref|XP_002555142.1| KLTH0G02376p [Lachancea thermotolerans]
gi|238936526|emb|CAR24705.1| KLTH0G02376p [Lachancea thermotolerans CBS 6340]
Length = 251
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 59/72 (81%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +G++A+DGI+LAAE++ T+KLL++G++S
Sbjct: 4 RRFDSRTTIFSPEGRLYQVEYALESISHAGTAIGVMAKDGIVLAAERKVTSKLLEQGSSS 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D++ +
Sbjct: 64 EKLYKLNDNITV 75
>gi|341891846|gb|EGT47781.1| hypothetical protein CAEBREN_13617 [Caenorhabditis brenneri]
gi|341898373|gb|EGT54308.1| CBN-PAS-3 protein [Caenorhabditis brenneri]
Length = 250
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI++AAE++N +KLLD+ +
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSVLT 62
Query: 95 EKIYKLHDSLN 105
EK+Y+L D+++
Sbjct: 63 EKVYRLSDNIS 73
>gi|308474035|ref|XP_003099240.1| CRE-PAS-3 protein [Caenorhabditis remanei]
gi|308267543|gb|EFP11496.1| CRE-PAS-3 protein [Caenorhabditis remanei]
Length = 250
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI++AAE++N +KLLD+ +
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSVLT 62
Query: 95 EKIYKLHDSLN 105
EK+Y+L D+++
Sbjct: 63 EKVYRLSDNIS 73
>gi|268567424|ref|XP_002639985.1| C. briggsae CBR-PAS-3 protein [Caenorhabditis briggsae]
Length = 250
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGTCLGILA DGI++AAE++N +KLLD+ +
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSVLT 62
Query: 95 EKIYKLHDSLN 105
EK+Y+L D+++
Sbjct: 63 EKVYRLSDNIS 73
>gi|195476432|ref|XP_002086125.1| GE14482 [Drosophila yakuba]
gi|194185984|gb|EDW99595.1| GE14482 [Drosophila yakuba]
Length = 70
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 51/68 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R+TNKLLD S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPS 62
Query: 95 EKIYKLHD 102
EKI L++
Sbjct: 63 EKIKGLNE 70
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAISHAGTCLGILA+DGILLAAE R
Sbjct: 17 RLYQVEYAMEAISHAGTCLGILAEDGILLAAECR 50
>gi|358336680|dbj|GAA55137.1| 20S proteasome subunit alpha 3, partial [Clonorchis sinensis]
Length = 924
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 47/56 (83%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYAMEA+ HAGTCLGI+A DGI+LAAE+R N LLDE SEKIYK++D +
Sbjct: 693 RLYQVEYAMEAVGHAGTCLGIVASDGIVLAAERRFINNLLDETAFSEKIYKINDDI 748
>gi|225716228|gb|ACO13960.1| Proteasome subunit alpha type-4 [Esox lucius]
Length = 234
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG CLGILA DG+LLAAE+RN +KLLD+ S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGACLGILANDGVLLAAERRNIHKLLDDVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI HAG CLGILA DG+LLAAE+R
Sbjct: 17 RLYQVEYAMEAIGHAGACLGILANDGVLLAAERR 50
>gi|25143215|ref|NP_491520.2| Protein PAS-3 [Caenorhabditis elegans]
gi|12229924|sp|Q9N599.2|PSA4_CAEEL RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Proteasome subunit alpha 3
gi|351065066|emb|CCD66205.1| Protein PAS-3 [Caenorhabditis elegans]
Length = 250
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAGTCLGIL+ +GI++AAE++N +KLLD+ +
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMT 62
Query: 95 EKIYKLHDSLN 105
EK+Y+L D+++
Sbjct: 63 EKVYRLSDNIS 73
>gi|115767142|ref|XP_786996.2| PREDICTED: proteasome subunit alpha type-4-like [Strongylocentrotus
purpuratus]
Length = 257
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAGT LGILA DG+LLAAE+RNT+KLLD+ S
Sbjct: 3 RRYDSKTTIFSPEGRLYQVEYAMEAIGHAGTSLGILASDGVLLAAERRNTHKLLDDVVFS 62
Query: 95 EKIYKLHDSL 104
+KIYKL+ +
Sbjct: 63 DKIYKLNSDM 72
>gi|45198836|ref|NP_985865.1| AFR318Wp [Ashbya gossypii ATCC 10895]
gi|44984865|gb|AAS53689.1| AFR318Wp [Ashbya gossypii ATCC 10895]
gi|374109096|gb|AEY98002.1| FAFR318Wp [Ashbya gossypii FDAG1]
Length = 251
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 58/72 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ T+KLL++ T+S
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSKLLEQDTSS 63
Query: 95 EKIYKLHDSLNI 106
EK+Y+L+D++ +
Sbjct: 64 EKLYRLNDNITV 75
>gi|363748150|ref|XP_003644293.1| hypothetical protein Ecym_1230 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887925|gb|AET37476.1| hypothetical protein Ecym_1230 [Eremothecium cymbalariae
DBVPG#7215]
Length = 251
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 58/72 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ T+KLL++ T+S
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSKLLEQDTSS 63
Query: 95 EKIYKLHDSLNI 106
EK+Y+L+D++ +
Sbjct: 64 EKLYRLNDNITV 75
>gi|388581891|gb|EIM22198.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 943
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQ+EYAMEAISHAGTC+GILAQDG++LAAEKR T+KLLD+ S
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTCIGILAQDGVVLAAEKRVTSKLLDKAEAS 62
Query: 95 -EKIYKLHDSL 104
EKI+ L+ ++
Sbjct: 63 NEKIFNLNSNI 73
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/35 (85%), Positives = 35/35 (100%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGTC+GILAQDG++LAAEKR+
Sbjct: 17 RLYQIEYAMEAISHAGTCIGILAQDGVVLAAEKRV 51
>gi|145244710|ref|XP_001394650.1| proteasome subunit alpha type-4 [Aspergillus niger CBS 513.88]
gi|134079340|emb|CAK96969.1| unnamed protein product [Aspergillus niger]
gi|350631407|gb|EHA19778.1| hypothetical protein ASPNIDRAFT_178388 [Aspergillus niger ATCC
1015]
Length = 255
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|70991873|ref|XP_750785.1| proteasome component Pre9 [Aspergillus fumigatus Af293]
gi|119470082|ref|XP_001258013.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
gi|66848418|gb|EAL88747.1| proteasome component Pre9, putative [Aspergillus fumigatus Af293]
gi|119406165|gb|EAW16116.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
gi|159124347|gb|EDP49465.1| proteasome component Pre9, putative [Aspergillus fumigatus A1163]
Length = 255
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|121699598|ref|XP_001268075.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
gi|119396217|gb|EAW06649.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
Length = 255
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|115400489|ref|XP_001215833.1| proteasome component Y13 [Aspergillus terreus NIH2624]
gi|114191499|gb|EAU33199.1| proteasome component Y13 [Aspergillus terreus NIH2624]
Length = 255
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|238501678|ref|XP_002382073.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
gi|220692310|gb|EED48657.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
gi|391863754|gb|EIT73053.1| 20S proteasome, regulatory subunit alpha type PSMA4/PRE9
[Aspergillus oryzae 3.042]
Length = 255
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|67522601|ref|XP_659361.1| hypothetical protein AN1757.2 [Aspergillus nidulans FGSC A4]
gi|40744887|gb|EAA64043.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487101|tpe|CBF85505.1| TPA: proteasome component Pre9, putative (AFU_orthologue;
AFUA_6G08960) [Aspergillus nidulans FGSC A4]
Length = 255
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|451851027|gb|EMD64328.1| hypothetical protein COCSADRAFT_142708 [Cochliobolus sativus
ND90Pr]
gi|451996312|gb|EMD88779.1| hypothetical protein COCHEDRAFT_1182097 [Cochliobolus
heterostrophus C5]
Length = 253
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|189201059|ref|XP_001936866.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330926491|ref|XP_003301480.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
gi|187983965|gb|EDU49453.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311323656|gb|EFQ90425.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
Length = 253
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|225557322|gb|EEH05608.1| proteasome component [Ajellomyces capsulatus G186AR]
Length = 256
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Query: 36 RLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
RL + F P RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++E
Sbjct: 10 RLLRTTIFSPE-GRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSAE 68
Query: 96 KIYKLHDSL 104
K+Y L+D++
Sbjct: 69 KLYILNDNM 77
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 22 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 66
>gi|261205276|ref|XP_002627375.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
gi|239592434|gb|EEQ75015.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
gi|239611407|gb|EEQ88394.1| proteasome component Y13 [Ajellomyces dermatitidis ER-3]
gi|327348583|gb|EGE77440.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
Length = 251
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|212529064|ref|XP_002144689.1| proteasome component Pre9, putative [Talaromyces marneffei ATCC
18224]
gi|210074087|gb|EEA28174.1| proteasome component Pre9, putative [Talaromyces marneffei ATCC
18224]
Length = 250
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|378731660|gb|EHY58119.1| proteasome subunit alpha type-4 [Exophiala dermatitidis NIH/UT8656]
Length = 251
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|325096025|gb|EGC49335.1| proteasome component [Ajellomyces capsulatus H88]
Length = 251
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|154274566|ref|XP_001538134.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
gi|150414574|gb|EDN09936.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
Length = 251
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|240277965|gb|EER41472.1| proteasome component Y13 [Ajellomyces capsulatus H143]
Length = 264
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|169618195|ref|XP_001802511.1| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
gi|160703572|gb|EAT80099.2| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
Length = 259
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++EK+Y L+D
Sbjct: 18 FSPE-GRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILND 76
Query: 103 SL 104
++
Sbjct: 77 NM 78
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 23 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 67
>gi|225679093|gb|EEH17377.1| proteasome subunit alpha type-4 [Paracoccidioides brasiliensis
Pb03]
gi|226288109|gb|EEH43622.1| proteasome component Y13 [Paracoccidioides brasiliensis Pb18]
Length = 251
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|295658654|ref|XP_002789887.1| proteasome subunit alpha type-4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282848|gb|EEH38414.1| proteasome subunit alpha type-4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 251
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|351697663|gb|EHB00582.1| Proteasome subunit alpha type-4 [Heterocephalus glaber]
Length = 178
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEA HAGTCLGILA DG+LLAA++ N ++LLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEATGHAGTCLGILANDGVLLAAKRHNIHQLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK-RLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYAMEA HAGTCLGILA DG+LLAA++ ++Q + ++Y++ M A S
Sbjct: 17 RLYQVEYAMEATGHAGTCLGILANDGVLLAAKRHNIHQLLDEVFFSEKIYKLNEDM-ACS 75
Query: 62 HAGTCLG 68
A C+G
Sbjct: 76 VAAICIG 82
>gi|366998683|ref|XP_003684078.1| hypothetical protein TPHA_0A05700 [Tetrapisispora phaffii CBS 4417]
gi|357522373|emb|CCE61644.1| hypothetical protein TPHA_0A05700 [Tetrapisispora phaffii CBS 4417]
Length = 256
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 57/72 (79%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAEDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D++ +
Sbjct: 64 EKLYKLNDNITV 75
>gi|302403749|ref|XP_002999713.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
gi|261361469|gb|EEY23897.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
gi|346970693|gb|EGY14145.1| proteasome component Y13 [Verticillium dahliae VdLs.17]
Length = 251
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYTVNDNM 72
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFSFLPHMSRLYQVEYAM 57
RLYQVEYA+EAISHAGT +GILAQDGI+LAAE++ L QD S +LY V M
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDTS----AEKLYTVNDNM 72
>gi|242764570|ref|XP_002340801.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
10500]
gi|218723997|gb|EED23414.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
10500]
Length = 250
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILAQDGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILAQDGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDTS 61
>gi|225714226|gb|ACO12959.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
gi|290561435|gb|ADD38118.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
Length = 253
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL+QVEYAMEAI HAGT LGILA DGI++AAE++NTNKLLD+ S
Sbjct: 3 RRYDTRTTIFSPEGRLFQVEYAMEAIGHAGTVLGILATDGIVVAAERKNTNKLLDDVFHS 62
Query: 95 EKIYKLHDSL 104
EKIY L++++
Sbjct: 63 EKIYSLNENM 72
>gi|358369367|dbj|GAA85982.1| proteasome component Y13 [Aspergillus kawachii IFO 4308]
Length = 254
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 52/56 (92%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYA+EAISHAGT LGILA+DGI+LAAEK+ T+KLL++ T++EK+Y L+D++
Sbjct: 16 RLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNM 71
>gi|225712516|gb|ACO12104.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
Length = 253
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL+QVEYAMEAI HAGT LGILA DGI++AAE++NTNKLLD+ S
Sbjct: 3 RRYDTRTTIFSPEGRLFQVEYAMEAIGHAGTVLGILATDGIVVAAERKNTNKLLDDVFHS 62
Query: 95 EKIYKLHDSL 104
EKIY L++++
Sbjct: 63 EKIYSLNENV 72
>gi|254581746|ref|XP_002496858.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
gi|238939750|emb|CAR27925.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
Length = 253
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ T+KLL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAEDGIVLAAERKVTSKLLEQDTST 63
Query: 95 EKIYKLHDSL 104
EK+Y+L+D +
Sbjct: 64 EKLYRLNDKI 73
>gi|367013724|ref|XP_003681362.1| hypothetical protein TDEL_0D05670 [Torulaspora delbrueckii]
gi|359749022|emb|CCE92151.1| hypothetical protein TDEL_0D05670 [Torulaspora delbrueckii]
Length = 255
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+KLL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMATDGIVLAAERKVTSKLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+Y+L+D + +
Sbjct: 64 EKLYRLNDKITV 75
>gi|307211266|gb|EFN87452.1| Proteasome subunit alpha type-4 [Harpegnathos saltator]
Length = 233
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAISHAGTCLGILA DGILLAAEKRNTNKLLDE SEKIYKL+D +
Sbjct: 1 MEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLNDDI 48
>gi|169769230|ref|XP_001819085.1| proteasome subunit alpha type-4 [Aspergillus oryzae RIB40]
gi|83766943|dbj|BAE57083.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 255
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGIL +DGI+LAAEK+ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILVKDGIVLAAEKKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYTLNDNM 72
>gi|361125155|gb|EHK97209.1| putative proteasome subunit alpha type-4 [Glarea lozoyensis 74030]
Length = 210
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKV 51
>gi|154298453|ref|XP_001549649.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 211
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKV 51
>gi|406860899|gb|EKD13956.1| proteasome component Y13 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 257
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|396475071|ref|XP_003839698.1| similar to proteasome subunit alpha type-4 [Leptosphaeria maculans
JN3]
gi|312216268|emb|CBX96219.1| similar to proteasome subunit alpha type-4 [Leptosphaeria maculans
JN3]
Length = 253
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|453088699|gb|EMF16739.1| proteasome subunit alpha type-4 [Mycosphaerella populorum SO2202]
Length = 252
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSLNIIT 108
EK+Y L+D N+IT
Sbjct: 63 EKLYILND--NMIT 74
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTS 61
>gi|388853997|emb|CCF52341.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Ustilago hordei]
Length = 270
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK+ T+KLL++ +SEKI+ +
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQSSEKIFAVS 69
Query: 102 DSL 104
D++
Sbjct: 70 DNV 72
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKV 51
>gi|156840806|ref|XP_001643781.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156114406|gb|EDO15923.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 259
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EKIY+L+D + +
Sbjct: 64 EKIYRLNDKITV 75
>gi|119193923|ref|XP_001247565.1| proteasome component [Coccidioides immitis RS]
gi|392863194|gb|EAS36085.2| proteasome component [Coccidioides immitis RS]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|258575131|ref|XP_002541747.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
gi|237902013|gb|EEP76414.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|50308239|ref|XP_454120.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643255|emb|CAG99207.1| KLLA0E03917p [Kluyveromyces lactis]
Length = 249
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+ + GI+LAAE++ T+KLL++ T+S
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMTEQGIVLAAERKVTSKLLEQDTSS 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D++ +
Sbjct: 64 EKLYKLNDNITV 75
>gi|425778303|gb|EKV16437.1| Proteasome subunit alpha type [Penicillium digitatum Pd1]
gi|425780680|gb|EKV18684.1| Proteasome subunit alpha type [Penicillium digitatum PHI26]
Length = 255
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYTINDNM 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKV 51
>gi|255932237|ref|XP_002557675.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582294|emb|CAP80472.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 255
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYTINDNM 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKV 51
>gi|303311685|ref|XP_003065854.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105516|gb|EER23709.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320039756|gb|EFW21690.1| proteasome component [Coccidioides posadasii str. Silveira]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|156042279|ref|XP_001587697.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154696073|gb|EDN95811.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 256
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKV 51
>gi|400598337|gb|EJP66054.1| proteasome component Y13 [Beauveria bassiana ARSEF 2860]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|347440672|emb|CCD33593.1| similar to proteasome subunit alpha type-4 [Botryotinia fuckeliana]
Length = 256
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|327302430|ref|XP_003235907.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
gi|326461249|gb|EGD86702.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|296813891|ref|XP_002847283.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
gi|238842539|gb|EEQ32201.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|322694126|gb|EFY85964.1| proteasome component Y13 [Metarhizium acridum CQMa 102]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|384484558|gb|EIE76738.1| proteasome subunit alpha type-4 [Rhizopus delemar RA 99-880]
Length = 247
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAIS AG LGILA+DGI++AAEK+ T+KLL+ +S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISQAGIALGILAKDGIVIAAEKKVTSKLLENDASS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D++
Sbjct: 63 EKIYKLNDNI 72
>gi|302510154|ref|XP_003017037.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
gi|302654562|ref|XP_003019085.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
gi|315040688|ref|XP_003169721.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
gi|291180607|gb|EFE36392.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
gi|291182782|gb|EFE38440.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
gi|311345683|gb|EFR04886.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
gi|326475218|gb|EGD99227.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
gi|326479704|gb|EGE03714.1| proteasome component Y13 [Trichophyton equinum CBS 127.97]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|358395275|gb|EHK44662.1| hypothetical protein TRIATDRAFT_299605 [Trichoderma atroviride IMI
206040]
Length = 251
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|346327454|gb|EGX97050.1| proteasome component Y13 [Cordyceps militaris CM01]
Length = 251
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|340514403|gb|EGR44666.1| proteasome, subunit alpha type 4-like protein [Trichoderma reesei
QM6a]
Length = 251
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|358389239|gb|EHK26831.1| hypothetical protein TRIVIDRAFT_165883 [Trichoderma virens Gv29-8]
Length = 251
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|322710739|gb|EFZ02313.1| proteasome component Y13 [Metarhizium anisopliae ARSEF 23]
Length = 251
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYVLNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|384501132|gb|EIE91623.1| hypothetical protein RO3G_16334 [Rhizopus delemar RA 99-880]
Length = 249
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAIS AG LGILA+DGI++AAEK+ T+KLL+ +S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISQAGIALGILAKDGIVIAAEKKVTSKLLENDASS 62
Query: 95 EKIYKLHDSL 104
EKIYKL+D++
Sbjct: 63 EKIYKLNDNI 72
>gi|452847781|gb|EME49713.1| hypothetical protein DOTSEDRAFT_68478 [Dothistroma septosporum
NZE10]
Length = 264
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILANDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILANDGIVLAAERKVTSKLLEQDTS 61
>gi|452989755|gb|EME89510.1| hypothetical protein MYCFIDRAFT_63049 [Pseudocercospora fijiensis
CIRAD86]
Length = 252
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTS 61
>gi|343429011|emb|CBQ72585.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Sporisorium
reilianum SRZ2]
Length = 271
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK+ T+KLL++ +SEKI+ +
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQSSEKIFTVS 69
Query: 102 DSL 104
D++
Sbjct: 70 DNV 72
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKV 51
>gi|296419027|ref|XP_002839126.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635121|emb|CAZ83317.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LG+LA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGVLAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT LG+LA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTALGVLAKDGIVLAAERKV 51
>gi|403214022|emb|CCK68523.1| hypothetical protein KNAG_0B00760 [Kazachstania naganishii CBS
8797]
Length = 259
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 56/72 (77%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +G+LAQDGI++AAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGVLAQDGIVIAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+Y+L+D + +
Sbjct: 64 EKLYRLNDKIVV 75
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+E+ISHAGT +G+LAQDGI++AAE++ L QD S
Sbjct: 18 RLYQVEYALESISHAGTAIGVLAQDGIVIAAERKVTSTLLEQDTS 62
>gi|326433120|gb|EGD78690.1| proteasome subunit alpha type-4 [Salpingoeca sp. ATCC 50818]
Length = 281
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISHAGTCLGIL+ +G++LAAEK +T KLLD +++EKI+KL +
Sbjct: 12 FSPE-GRLYQVEYAMEAISHAGTCLGILSSEGVVLAAEKISTAKLLDMSSSAEKIFKLDE 70
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYAMEAISHAGTCLGIL+ +G++LAAEK
Sbjct: 17 RLYQVEYAMEAISHAGTCLGILSSEGVVLAAEK 49
>gi|71008188|ref|XP_758193.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
gi|46097865|gb|EAK83098.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
Length = 272
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK+ T+KLL++ +SEKI+ +
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQSSEKIFAVS 69
Query: 102 DSL 104
D++
Sbjct: 70 DNV 72
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKV 51
>gi|196013139|ref|XP_002116431.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581022|gb|EDV21101.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 260
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAI AGTC GILA+DGI+L AE++ TNKLLDE S+KIYK++
Sbjct: 11 TFSPE-GRLYQVEYAMEAIGLAGTCFGILAEDGIVLGAERKITNKLLDEIPFSDKIYKIN 69
Query: 102 DSL 104
+++
Sbjct: 70 ENM 72
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL-NQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYAMEAI AGTC GILA+DGI+L AE+++ N+ +P ++Y++ M A S
Sbjct: 17 RLYQVEYAMEAIGLAGTCFGILAEDGIVLGAERKITNKLLDEIPFSDKIYKINENM-ACS 75
Query: 62 HAG 64
AG
Sbjct: 76 VAG 78
>gi|302890063|ref|XP_003043916.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724835|gb|EEU38203.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 251
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|320590076|gb|EFX02521.1| proteasome component [Grosmannia clavigera kw1407]
Length = 251
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|46121975|ref|XP_385541.1| hypothetical protein FG05365.1 [Gibberella zeae PH-1]
gi|342873109|gb|EGU75338.1| hypothetical protein FOXB_14148 [Fusarium oxysporum Fo5176]
gi|408391142|gb|EKJ70524.1| hypothetical protein FPSE_09277 [Fusarium pseudograminearum CS3096]
Length = 251
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|398404235|ref|XP_003853584.1| proteasome core particle subunit alpha 3 [Zymoseptoria tritici
IPO323]
gi|339473466|gb|EGP88560.1| hypothetical protein MYCGRDRAFT_104004 [Zymoseptoria tritici
IPO323]
Length = 251
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LGILA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDTS 61
>gi|85091201|ref|XP_958786.1| proteasome component Y13 [Neurospora crassa OR74A]
gi|28920171|gb|EAA29550.1| proteasome component Y13 [Neurospora crassa OR74A]
gi|336466568|gb|EGO54733.1| proteasome component Y13 [Neurospora tetrasperma FGSC 2508]
gi|350286544|gb|EGZ67791.1| proteasome component Y13 [Neurospora tetrasperma FGSC 2509]
Length = 251
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|164661205|ref|XP_001731725.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
gi|159105626|gb|EDP44511.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
Length = 256
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGT LGILA DG++LAAEK+ T+KLL++ +SEKI++L
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGTVLGILASDGVVLAAEKKVTSKLLEQDKSSEKIFQL- 68
Query: 102 DSLNIIT 108
S N+++
Sbjct: 69 -SGNVLS 74
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT LGILA DG++LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGTVLGILASDGVVLAAEKKV 51
>gi|389636135|ref|XP_003715720.1| proteasome subunit alpha type-4 [Magnaporthe oryzae 70-15]
gi|59802961|gb|AAX07682.1| proteasome subunit alpha type 4-like protein [Magnaporthe grisea]
gi|351648053|gb|EHA55913.1| proteasome subunit alpha type-4 [Magnaporthe oryzae 70-15]
gi|440474788|gb|ELQ43511.1| proteasome component Y13 [Magnaporthe oryzae Y34]
gi|440490961|gb|ELQ70452.1| proteasome component Y13 [Magnaporthe oryzae P131]
Length = 251
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKV 51
>gi|336268737|ref|XP_003349131.1| hypothetical protein SMAC_06967 [Sordaria macrospora k-hell]
gi|380089462|emb|CCC12560.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 251
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKV 51
>gi|428176368|gb|EKX45253.1| proteasome subunit alpha type 4 [Guillardia theta CCMP2712]
Length = 246
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAG C+GILA+DGI+LA EK+ T+KLL E +SEK+YK+
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGICVGILAKDGIVLAVEKKITSKLL-ENISSEKMYKVD 68
Query: 102 DSL 104
D L
Sbjct: 69 DHL 71
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYAMEAISHAG C+GILA+DGI+LA EK++ ++Y+V+
Sbjct: 17 RLYQVEYAMEAISHAGICVGILAKDGIVLAVEKKITSKLLENISSEKMYKVD 68
>gi|3114271|pdb|1RYP|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114285|pdb|1RYP|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513414|pdb|1G65|B Chain B, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513428|pdb|1G65|P Chain P, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150378|pdb|1JD2|B Chain B, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150399|pdb|1JD2|W Chain W, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279369|pdb|2F16|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279383|pdb|2F16|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032203|pdb|2FAK|B Chain B, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032217|pdb|2FAK|P Chain P, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490844|pdb|2GPL|B Chain B, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490858|pdb|2GPL|P Chain P, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016368|pdb|3D29|B Chain B, Proteasome Inhibition By Fellutamide B
gi|190016382|pdb|3D29|P Chain P, Proteasome Inhibition By Fellutamide B
gi|197725322|pdb|3E47|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725336|pdb|3E47|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939213|pdb|3DY3|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939227|pdb|3DY3|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939241|pdb|3DY4|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939255|pdb|3DY4|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828238|pdb|3GPJ|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828252|pdb|3GPJ|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588322|pdb|3GPT|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588336|pdb|3GPT|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588350|pdb|3GPW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588364|pdb|3GPW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588544|pdb|3HYE|B Chain B, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588558|pdb|3HYE|P Chain P, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689382|pdb|3MG4|B Chain B, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689396|pdb|3MG4|P Chain P, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361145|pdb|3MG0|B Chain B, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361159|pdb|3MG0|P Chain P, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892342|pdb|3OKJ|B Chain B, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892356|pdb|3OKJ|P Chain P, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|350610673|pdb|3TDD|B Chain B, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610687|pdb|3TDD|P Chain P, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545847|pdb|3SHJ|B Chain B, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545861|pdb|3SHJ|P Chain P, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|402550733|pdb|4GK7|B Chain B, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550747|pdb|4GK7|P Chain P, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973861|pdb|4FZC|B Chain B, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973875|pdb|4FZC|P Chain P, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973889|pdb|4FZG|B Chain B, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973903|pdb|4FZG|P Chain P, 20s Yeast Proteasome In Complex With Glidobactin
Length = 244
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 62
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 63 EKLYKLNDKIAV 74
>gi|398365831|ref|NP_011651.3| proteasome core particle subunit alpha 3 [Saccharomyces cerevisiae
S288c]
gi|130875|sp|P23638.1|PSA3_YEAST RecName: Full=Proteasome subunit alpha type-3; AltName:
Full=Macropain subunit Y13; AltName: Full=Multicatalytic
endopeptidase complex subunit Y13; AltName:
Full=Proteasome component Y13; AltName: Full=Proteinase
YSCE subunit 13
gi|75765701|pdb|1Z7Q|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765715|pdb|1Z7Q|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847461|pdb|2ZCY|B Chain B, Yeast 20s Proteasome:syringolin A-Complex
gi|178847475|pdb|2ZCY|P Chain P, Yeast 20s Proteasome:syringolin A-Complex
gi|178847503|pdb|3BDM|B Chain B, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847517|pdb|3BDM|P Chain P, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462937|pdb|3NZJ|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462951|pdb|3NZJ|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462965|pdb|3NZW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462979|pdb|3NZW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462993|pdb|3NZX|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463007|pdb|3NZX|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|378792242|pdb|3UN4|B Chain B, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792256|pdb|3UN4|P Chain P, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792276|pdb|3UN8|B Chain B, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792290|pdb|3UN8|P Chain P, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071963|pdb|4B4T|C Chain C, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072193|pdb|4G4S|C Chain C, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302340|pdb|4INR|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302354|pdb|4INR|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302368|pdb|4INT|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302382|pdb|4INT|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302396|pdb|4INU|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302410|pdb|4INU|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172262|gb|AAA34907.1| proteasome Y13 [Saccharomyces cerevisiae]
gi|506480|emb|CAA40054.1| proteasome Y13 subunit [Saccharomyces cerevisiae]
gi|1323225|emb|CAA97148.1| PRE9 [Saccharomyces cerevisiae]
gi|151943415|gb|EDN61726.1| proteasome component Y13 [Saccharomyces cerevisiae YJM789]
gi|190406847|gb|EDV10114.1| proteasome component Y13 [Saccharomyces cerevisiae RM11-1a]
gi|207345073|gb|EDZ72012.1| YGR135Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270347|gb|EEU05553.1| Pre9p [Saccharomyces cerevisiae JAY291]
gi|285812328|tpg|DAA08228.1| TPA: proteasome core particle subunit alpha 3 [Saccharomyces
cerevisiae S288c]
gi|323304876|gb|EGA58634.1| Pre9p [Saccharomyces cerevisiae FostersB]
gi|323308999|gb|EGA62229.1| Pre9p [Saccharomyces cerevisiae FostersO]
gi|323354824|gb|EGA86657.1| Pre9p [Saccharomyces cerevisiae VL3]
gi|349578344|dbj|GAA23510.1| K7_Pre9p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299391|gb|EIW10485.1| Pre9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 258
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|449303925|gb|EMC99932.1| hypothetical protein BAUCODRAFT_355760 [Baudoinia compniacensis
UAMH 10762]
Length = 268
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT LG+LA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGVLATDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT LG+LA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTALGVLATDGIVLAAERKVTSKLLEQDTS 61
>gi|367039687|ref|XP_003650224.1| hypothetical protein THITE_2109487 [Thielavia terrestris NRRL 8126]
gi|346997485|gb|AEO63888.1| hypothetical protein THITE_2109487 [Thielavia terrestris NRRL 8126]
Length = 251
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|323348418|gb|EGA82663.1| Pre9p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765413|gb|EHN06921.1| Pre9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 258
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|116203057|ref|XP_001227340.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177931|gb|EAQ85399.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 251
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|11513993|pdb|1G0U|B Chain B, A Gated Channel Into The Proteasome Core Particle
gi|11514007|pdb|1G0U|P Chain P, A Gated Channel Into The Proteasome Core Particle
gi|14488807|pdb|1FNT|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488821|pdb|1FNT|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|333361173|pdb|3MG6|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361187|pdb|3MG6|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361201|pdb|3MG7|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361215|pdb|3MG7|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361229|pdb|3MG8|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361243|pdb|3MG8|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
Length = 245
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|365760604|gb|EHN02314.1| Pre9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 221
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|443894875|dbj|GAC72222.1| translation initiation factor 3, subunit a [Pseudozyma antarctica
T-34]
Length = 706
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/63 (63%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK+ T+KLL++ +SEKI+ +
Sbjct: 447 TFSPE-GRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQSSEKIFTVS 505
Query: 102 DSL 104
D++
Sbjct: 506 DNV 508
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT +GILA+DGI+LAAEK++
Sbjct: 453 RLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKV 487
>gi|410077497|ref|XP_003956330.1| hypothetical protein KAFR_0C02020 [Kazachstania africana CBS 2517]
gi|372462914|emb|CCF57195.1| hypothetical protein KAFR_0C02020 [Kazachstania africana CBS 2517]
Length = 258
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ T+ LL++ T+
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSALLEQDTSV 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKITV 75
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 9/56 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFSFLPHMSRLYQV 53
RLYQVEYA+E+ISHAGT +GI+A+DGI+LAAE++ L QD S + +LY++
Sbjct: 18 RLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSALLEQDTS----VEKLYKL 69
>gi|367029243|ref|XP_003663905.1| hypothetical protein MYCTH_2306141 [Myceliophthora thermophila ATCC
42464]
gi|347011175|gb|AEO58660.1| hypothetical protein MYCTH_2306141 [Myceliophthora thermophila ATCC
42464]
Length = 251
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|259146637|emb|CAY79894.1| Pre9p [Saccharomyces cerevisiae EC1118]
Length = 258
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|171682782|ref|XP_001906334.1| hypothetical protein [Podospora anserina S mat+]
gi|170941350|emb|CAP67000.1| unnamed protein product [Podospora anserina S mat+]
Length = 250
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|50549081|ref|XP_502011.1| YALI0C19382p [Yarrowia lipolytica]
gi|49647878|emb|CAG82331.1| YALI0C19382p [Yarrowia lipolytica CLIB122]
Length = 250
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYAQEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 63
Query: 95 EKIYKLHDSL 104
EK+Y L++S+
Sbjct: 64 EKMYTLNESM 73
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 10/77 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFSFLPHMSRLYQVEYAM 57
RLYQVEYA EAISHAGT +GILA+DGI+LAAE++ L QD S ++Y + +M
Sbjct: 18 RLYQVEYAQEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS----AEKMYTLNESM 73
Query: 58 E-AISHAGTCLGILAQD 73
A++ + GIL Q+
Sbjct: 74 VCAVAGLNSDAGILVQN 90
>gi|209732692|gb|ACI67215.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI HAG+ L ILA DG+LLAAE+RN +KLLDE S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSRLEILANDGVLLAAERRNIHKLLDEVFFS 62
Query: 95 EKIYKLHDSL 104
EKIYKL++ +
Sbjct: 63 EKIYKLNEDM 72
>gi|401625640|gb|EJS43639.1| pre9p [Saccharomyces arboricola H-6]
Length = 258
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKIAV 75
>gi|366993485|ref|XP_003676507.1| hypothetical protein NCAS_0E00760 [Naumovozyma castellii CBS 4309]
gi|342302374|emb|CCC70146.1| hypothetical protein NCAS_0E00760 [Naumovozyma castellii CBS 4309]
Length = 259
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+A DG++LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMADDGLVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKITV 75
>gi|340780420|pdb|3OEU|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780434|pdb|3OEU|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780448|pdb|3OEV|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780462|pdb|3OEV|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|390980817|pdb|3SDI|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980831|pdb|3SDI|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980845|pdb|3SDK|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980859|pdb|3SDK|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
Length = 235
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++EK+YKL+D
Sbjct: 3 FSPE-GRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLND 61
Query: 103 SLNI 106
+ +
Sbjct: 62 KIAV 65
>gi|380490901|emb|CCF35697.1| proteasome subunit alpha type-4 [Colletotrichum higginsianum]
Length = 251
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYIVNDNM 72
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|440637274|gb|ELR07193.1| 20S proteasome subunit alpha 3 [Geomyces destructans 20631-21]
Length = 255
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILATDGIVLAAERKVTSKLLEQDTS 61
>gi|310795927|gb|EFQ31388.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 251
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYIVNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|429852095|gb|ELA27246.1| proteasome subunit alpha type-4 [Colletotrichum gloeosporioides
Nara gc5]
Length = 251
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYIVNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|340915045|gb|EGS18386.1| hypothetical protein CTHT_0064110 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 251
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D++
Sbjct: 63 EKLYVINDNM 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 61
>gi|385303984|gb|EIF48023.1| proteasome component y13 [Dekkera bruxellensis AWRI1499]
Length = 252
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAI+HAGT +G+LA+DGI+LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAINHAGTAIGVLAEDGIVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKMYVLNDNI 72
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAI+HAGT +G+LA+DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAINHAGTAIGVLAEDGIVLAAERKV 51
>gi|307106430|gb|EFN54676.1| hypothetical protein CHLNCDRAFT_24644 [Chlorella variabilis]
Length = 247
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---G 91
+R + + RLYQVEYAMEAIS+AG+C+GILA+DG++LAAEKR T+KLLD G
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISNAGSCVGILAKDGVVLAAEKRITSKLLDTQAVG 62
Query: 92 TTSEKIYKLHD 102
EK+Y+L D
Sbjct: 63 VRREKMYRLDD 73
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 35/36 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAIS+AG+C+GILA+DG++LAAEKR+
Sbjct: 17 RLYQVEYAMEAISNAGSCVGILAKDGVVLAAEKRIT 52
>gi|290992071|ref|XP_002678658.1| proteasome subunit alpha [Naegleria gruberi]
gi|284092271|gb|EFC45914.1| proteasome subunit alpha [Naegleria gruberi]
Length = 236
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
N+ +F P RLYQVEYAMEAISHAG LGI+A DGI+LAAEK+ T+KLLD +EK+
Sbjct: 7 NRTTTFSPE-GRLYQVEYAMEAISHAGAALGIIATDGIVLAAEKKITSKLLDNEKKTEKM 65
Query: 98 YKL 100
YKL
Sbjct: 66 YKL 68
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAG LGI+A DGI+LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGAALGIIATDGIVLAAEKKI 51
>gi|402079809|gb|EJT75074.1| hypothetical protein GGTG_08912 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 254
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 52/56 (92%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ T+KLL++ T++EK+Y L+D++
Sbjct: 20 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNM 75
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAISHAGT +GILA+DGI+LAAE++ L QD S
Sbjct: 20 RLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 64
>gi|401404806|ref|XP_003881853.1| putative proteasome subunit alpha type 4, subunit [Neospora caninum
Liverpool]
gi|325116267|emb|CBZ51820.1| putative proteasome subunit alpha type 4, subunit [Neospora caninum
Liverpool]
Length = 252
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYA+EAI++A + LGILAQDG++LAA+K T+KLLD+G T EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASSTLGILAQDGVVLAADKMVTSKLLDQGRTKEKIYKVD 69
Query: 102 D 102
D
Sbjct: 70 D 70
>gi|298508224|pdb|1VSY|C Chain C, Proteasome Activator Complex
gi|298508238|pdb|1VSY|Q Chain Q, Proteasome Activator Complex
gi|298508440|pdb|3L5Q|H Chain H, Proteasome Activator Complex
gi|298508454|pdb|3L5Q|T Chain T, Proteasome Activator Complex
Length = 232
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 51/58 (87%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNI 106
RLYQVEYA+E+ISHAGT +GI+A DGI+LAAE++ T+ LL++ T++EK+YKL+D + +
Sbjct: 5 RLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAV 62
>gi|351705601|gb|EHB08520.1| Proteasome subunit alpha type-4 [Heterocephalus glaber]
Length = 182
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P LYQV YAMEA HAGTCLGILA DG+LLAAE+ N +KLLDE SEKIYKL++
Sbjct: 12 FSPE-GHLYQVGYAMEATGHAGTCLGILANDGVLLAAERLNIHKLLDEVFFSEKIYKLNE 70
Query: 103 SL 104
+
Sbjct: 71 DM 72
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 12/73 (16%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN----QDFSFLPHMSRLYQVEYAMEA 59
LYQV YAMEA HAGTCLGILA DG+LLAAE RLN D F ++Y++ M A
Sbjct: 18 LYQVGYAMEATGHAGTCLGILANDGVLLAAE-RLNIHKLLDEVFFSE--KIYKLNEDM-A 73
Query: 60 ISHAG----TCLG 68
S AG TC+G
Sbjct: 74 CSMAGGWKATCIG 86
>gi|254573664|ref|XP_002493941.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
subunit [Komagataella pastoris GS115]
gi|238033740|emb|CAY71762.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
subunit [Komagataella pastoris GS115]
Length = 252
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +G+LA DG++LAAEK+ T+KLL++ +++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKVTSKLLEQDSSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKMYILNDNM 72
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +G+LA DG++LAAEK++
Sbjct: 17 RLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKV 51
>gi|328354240|emb|CCA40637.1| 20S proteasome subunit alpha 3 [Komagataella pastoris CBS 7435]
Length = 288
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +G+LA DG++LAAEK+ T+KLL++ +++
Sbjct: 39 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKVTSKLLEQDSSA 98
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 99 EKMYILNDNM 108
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +G+LA DG++LAAEK++
Sbjct: 53 RLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKV 87
>gi|345560273|gb|EGX43398.1| hypothetical protein AOL_s00215g134 [Arthrobotrys oligospora ATCC
24927]
Length = 250
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 55/70 (78%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAISHAGT +GILA DGI+LAAE++ T+KLL++ +++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAERKVTSKLLEQDSSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYILNDNM 72
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +GILA DGI+LAAE+++
Sbjct: 17 RLYQVEYALEAISHAGTAIGILATDGIVLAAERKV 51
>gi|320581587|gb|EFW95807.1| Alpha 3 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 252
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 54/68 (79%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAI+HAGT +G++A+DG++LAAE++ T+KLL++ T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALEAINHAGTAIGVMAKDGVVLAAERKVTSKLLEQDTSA 62
Query: 95 EKIYKLHD 102
EK+Y L+D
Sbjct: 63 EKMYVLND 70
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 37/45 (82%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+EAI+HAGT +G++A+DG++LAAE++ L QD S
Sbjct: 17 RLYQVEYALEAINHAGTAIGVMAKDGVVLAAERKVTSKLLEQDTS 61
>gi|339252808|ref|XP_003371627.1| multicatalytic endopeptidase [Trichinella spiralis]
gi|316968093|gb|EFV52428.1| multicatalytic endopeptidase [Trichinella spiralis]
Length = 307
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI+HAGTCL +++++GI++ AE R TNKLLD+
Sbjct: 46 RRYDSRTTIFSPEGRLYQVEYAMEAINHAGTCLSLISKEGIIMVAENRITNKLLDDEAAQ 105
Query: 95 EKIYKLHDSL 104
EKIY+L+ +
Sbjct: 106 EKIYRLNSDI 115
>gi|213402603|ref|XP_002172074.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
yFS275]
gi|212000121|gb|EEB05781.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
yFS275]
Length = 247
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+EAI+HAG +GI+++DGI+LAAEK+ T+KLL++ T+SEK+Y L D
Sbjct: 12 FSPE-GRLYQVEYALEAINHAGVAMGIVSKDGIILAAEKKVTSKLLEQDTSSEKLYVLSD 70
Query: 103 SL 104
+
Sbjct: 71 HM 72
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAI+HAG +GI+++DGI+LAAEK++
Sbjct: 17 RLYQVEYALEAINHAGVAMGIVSKDGIILAAEKKV 51
>gi|379994190|gb|AFD22722.1| proteasome subunit alpha type 4, partial [Collodictyon triciliatum]
Length = 168
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAG C+GIL+ +G++LA+EK+ T+KLL E T S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGACIGILSSEGVVLASEKKITSKLL-EPTKS 61
Query: 95 EKIYKLHDSL 104
EK+Y+L D +
Sbjct: 62 EKMYRLDDHI 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYAMEAISHAG C+GIL+ +G++LA+EK++ ++Y+++
Sbjct: 17 RLYQVEYAMEAISHAGACIGILSSEGVVLASEKKITSKLLEPTKSEKMYRLD 68
>gi|365991976|ref|XP_003672816.1| hypothetical protein NDAI_0L00880 [Naumovozyma dairenensis CBS 421]
gi|410729859|ref|XP_003671108.2| hypothetical protein NDAI_0G00890 [Naumovozyma dairenensis CBS 421]
gi|401779927|emb|CCD25865.2| hypothetical protein NDAI_0G00890 [Naumovozyma dairenensis CBS 421]
Length = 254
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+ DGI+LAAE++ T+ LL++ T+
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTGIGIMVPDGIVLAAERKVTSTLLEQDTSI 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D + +
Sbjct: 64 EKLYKLNDKITV 75
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 9/56 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFSFLPHMSRLYQV 53
RLYQVEYA+E+ISHAGT +GI+ DGI+LAAE++ L QD S + +LY++
Sbjct: 18 RLYQVEYALESISHAGTGIGIMVPDGIVLAAERKVTSTLLEQDTS----IEKLYKL 69
>gi|50290521|ref|XP_447692.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527002|emb|CAG60637.1| unnamed protein product [Candida glabrata]
Length = 257
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+E+ISHAGT +GI+ +GI+LAAE++ T+ LL++ T++
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMTSEGIVLAAERKVTSTLLEQDTST 63
Query: 95 EKIYKLHDSLNI 106
EK+YKL+D +
Sbjct: 64 EKLYKLNDRTTV 75
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 5/45 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFS 42
RLYQVEYA+E+ISHAGT +GI+ +GI+LAAE++ L QD S
Sbjct: 18 RLYQVEYALESISHAGTAIGIMTSEGIVLAAERKVTSTLLEQDTS 62
>gi|237834583|ref|XP_002366589.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
gi|211964253|gb|EEA99448.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
gi|221486124|gb|EEE24394.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
gondii GT1]
gi|221503621|gb|EEE29312.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
gondii VEG]
Length = 252
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYA+EAI++A + LGILA DG++LAA+K T+KLLD+G T EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASSTLGILATDGVVLAADKMVTSKLLDQGRTKEKIYKVD 69
Query: 102 D 102
D
Sbjct: 70 D 70
>gi|330841264|ref|XP_003292621.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
gi|325077121|gb|EGC30855.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
Length = 249
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT- 93
+R +Q + R+YQVEYAM AI HAG +GILA+DGI+LAAEK+ T KLLD+ TT
Sbjct: 3 RRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDQSTTI 62
Query: 94 SEKIYKLHD 102
SEK++K+ +
Sbjct: 63 SEKMFKIDE 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYAM AI HAG +GILA+DGI+LAAEK+
Sbjct: 17 RVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKK 50
>gi|449019113|dbj|BAM82515.1| 20S core proteasome subunit alpha 3 [Cyanidioschyzon merolae strain
10D]
Length = 264
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---- 90
+R +Q + RLYQVEYA+EAISHAG CLGIL DG++LAAE+RN +KLLD+
Sbjct: 3 RRYDQRVTTFSPEGRLYQVEYALEAISHAGACLGILCSDGVVLAAERRNLSKLLDKRGRI 62
Query: 91 GTTSEKIYKLHDSL 104
SEK+Y++ + +
Sbjct: 63 TRASEKMYEIDNHI 76
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA+EAISHAG CLGIL DG++LAAE+R
Sbjct: 17 RLYQVEYALEAISHAGACLGILCSDGVVLAAERR 50
>gi|440803659|gb|ELR24542.1| 20S proteasome alpha subunit C, putative [Acanthamoeba castellanii
str. Neff]
Length = 251
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAG +GIL +DG++LA EK+ +KLL+ G S
Sbjct: 3 RRYDARTTIFSPEGRLYQVEYAMEAISHAGAAVGILGKDGVVLACEKKIASKLLEPGKRS 62
Query: 95 EKIYKLHD 102
EK+Y++ D
Sbjct: 63 EKMYRIDD 70
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAG +GIL +DG++LA EK++
Sbjct: 17 RLYQVEYAMEAISHAGAAVGILGKDGVVLACEKKI 51
>gi|353236269|emb|CCA68267.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Piriformospora
indica DSM 11827]
Length = 262
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLASDGVVLAAEKKVTGKLLDLSVTK 62
Query: 90 ---EGTTSEKIYKLHDSLNI 106
G + EKIY L D++ +
Sbjct: 63 DGGYGGSGEKIYLLTDNVVV 82
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQ+EYAMEAISHAGT LG+LA DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLASDGVVLAAEKKVT 52
>gi|384246616|gb|EIE20105.1| 20S proteasome alpha subunit C [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---G 91
+R + + RLYQVEYAMEAIS+AG LG+LA DG++LAAEKR T+KLLD G
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISNAGAALGVLAVDGVVLAAEKRITSKLLDTNAVG 62
Query: 92 TTSEKIYKLHD 102
EK+YKL D
Sbjct: 63 VRREKMYKLAD 73
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAIS+AG LG+LA DG++LAAEKR+
Sbjct: 17 RLYQVEYAMEAISNAGAALGVLAVDGVVLAAEKRI 51
>gi|255637334|gb|ACU18997.1| unknown [Glycine max]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 52
>gi|168041029|ref|XP_001772995.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675728|gb|EDQ62220.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR T+KLL ++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDD 70
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQD-FSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR+ + L ++Y+++
Sbjct: 17 RLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKID------D 70
Query: 62 HAGTCL-GILAQDGILL 77
H + GI+A IL+
Sbjct: 71 HVACAVAGIMADANILI 87
>gi|225462543|ref|XP_002266917.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Vitis
vinifera]
gi|225462545|ref|XP_002266877.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Vitis
vinifera]
gi|147799989|emb|CAN77245.1| hypothetical protein VITISV_018657 [Vitis vinifera]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 52
>gi|388491474|gb|AFK33803.1| unknown [Medicago truncatula]
gi|388517995|gb|AFK47059.1| unknown [Medicago truncatula]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKV 51
>gi|356496249|ref|XP_003516981.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
gi|356496251|ref|XP_003516982.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 52
>gi|302758604|ref|XP_002962725.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
gi|302797208|ref|XP_002980365.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
gi|300151981|gb|EFJ18625.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
gi|300169586|gb|EFJ36188.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
Length = 254
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISNAGAAIGVLARDGVVLAAEKRVTSKLLAASRST 62
Query: 95 EKIYKL 100
EK+YK+
Sbjct: 63 EKMYKI 68
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 11/92 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR+ S L SR + Y ++ H
Sbjct: 17 RLYQVEYAMEAISNAGAAIGVLARDGVVLAAEKRVT---SKLLAASRSTEKMYKIDG--H 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKLLDEGTT 93
A GI+A IL+ NT ++ +G T
Sbjct: 72 VAAAVAGIMADANILI-----NTARVAAQGYT 98
>gi|6984140|gb|AAF34770.1|AF227625_1 proteasome 27 kDa subunit [Euphorbia esula]
Length = 242
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 4 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 62
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 9 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 44
>gi|190345778|gb|EDK37722.2| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAIS AGT +GILA+DG++LA EK+ T+KLLD+ ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKFTSKLLDDDGSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYALNDNM 72
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT +GILA+DG++LA EK+
Sbjct: 17 RLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKF 51
>gi|357482775|ref|XP_003611674.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355513009|gb|AES94632.1| Proteasome subunit alpha type [Medicago truncatula]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKV 51
>gi|146420386|ref|XP_001486149.1| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAIS AGT +GILA+DG++LA EK+ T+KLLD+ ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKFTSKLLDDDGSA 62
Query: 95 EKIYKLHDSL 104
EK+Y L+D++
Sbjct: 63 EKLYALNDNM 72
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT +GILA+DG++LA EK+
Sbjct: 17 RLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKF 51
>gi|168039234|ref|XP_001772103.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676566|gb|EDQ63047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR T+KLL ++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDD 70
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQD-FSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR+ + L ++Y+++
Sbjct: 17 RLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKID------D 70
Query: 62 HAGTCL-GILAQDGILL 77
H + GI+A IL+
Sbjct: 71 HVACAVAGIMADANILI 87
>gi|356568146|ref|XP_003552274.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 52
>gi|356521060|ref|XP_003529176.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
gi|356521062|ref|XP_003529177.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 250
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT 52
>gi|409045163|gb|EKM54644.1| hypothetical protein PHACADRAFT_258633 [Phanerochaete carnosa
HHB-10118-sp]
Length = 261
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 10/82 (12%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DGI+LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGIVLAAEKKVTGKLLDLSGAK 62
Query: 90 ---EGTTSEKIYKLHDSLNIIT 108
G + EKI+ L+ N+IT
Sbjct: 63 EGGYGGSGEKIFLLNS--NVIT 82
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DGI+LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGIVLAAEKKV 51
>gi|168054345|ref|XP_001779592.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668990|gb|EDQ55586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR T+KLL ++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDD 70
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQD-FSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYAMEAIS+AG +G+LA+DG++LAAEKR+ + L ++Y+++
Sbjct: 17 RLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKID------D 70
Query: 62 HAGTCL-GILAQDGILL 77
H + GI+A IL+
Sbjct: 71 HVACAVAGIMADANILI 87
>gi|255637272|gb|ACU18966.1| unknown [Glycine max]
Length = 250
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAME---A 59
RLYQVEYAMEAI +AGT +GIL++DG++L EK++ S+L Q + E
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT---------SKLLQTSTSTEKMYK 67
Query: 60 ISHAGTC--LGILAQDGILL 77
I TC GI++ IL+
Sbjct: 68 IDDHVTCAVAGIMSDTNILI 87
>gi|444319308|ref|XP_004180311.1| hypothetical protein TBLA_0D02920 [Tetrapisispora blattae CBS 6284]
gi|387513353|emb|CCH60792.1| hypothetical protein TBLA_0D02920 [Tetrapisispora blattae CBS 6284]
Length = 258
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+E+ISHAGT +GI+++DGI+L AE++ T+KLL++ +EK+YKL D
Sbjct: 13 FSPE-GRLYQVEYALESISHAGTSIGIMSKDGIVLLAERKITSKLLEQDILNEKLYKLSD 71
Query: 103 SLNI 106
+ +
Sbjct: 72 KITL 75
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+E+ISHAGT +GI+++DGI+L AE+++
Sbjct: 18 RLYQVEYALESISHAGTSIGIMSKDGIVLLAERKI 52
>gi|217075150|gb|ACJ85935.1| unknown [Medicago truncatula]
Length = 229
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AGT +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKV 51
>gi|392938146|gb|AFM94013.1| proteasome alpha type 4 [Beta vulgaris]
Length = 250
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AG+ +GILA+DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTATSNEKMYKIDD 70
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AG+ +GILA+DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKV 51
>gi|162312364|ref|XP_001713040.1| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1172601|sp|Q09682.1|PSA3_SCHPO RecName: Full=Probable proteasome subunit alpha type-3
gi|159883893|emb|CAA90475.2| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
pombe]
Length = 248
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA+EAI+HAG LGI+A+DGI+LAAEK+ T+KLL++ ++EK+Y + D
Sbjct: 12 FSPE-GRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGD 70
Query: 103 SL 104
++
Sbjct: 71 NM 72
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 14/85 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA+EAI+HAG LGI+A+DGI+LAAEK++ S+L + E + E + H
Sbjct: 17 RLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKV---------TSKLLEQEESAEKLYH 67
Query: 63 AGTCL-----GILAQDGILLAAEKR 82
G + G+ A IL+ +R
Sbjct: 68 IGDNMLCAVAGLTADANILINYARR 92
>gi|299116799|emb|CBN74912.1| proteasome subunit [Ectocarpus siliculosus]
Length = 249
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI++AGTC+GILA+DGI++AAE++ +KLL TSEK Y+L+
Sbjct: 11 TFSPE-GRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLY 69
Query: 102 DSLNII 107
++ + +
Sbjct: 70 ENASCV 75
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 35/35 (100%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI++AGTC+GILA+DGI++AAE+++
Sbjct: 17 RLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKV 51
>gi|77999303|gb|ABB16998.1| proteasome-like protein alpha subunit [Solanum tuberosum]
Length = 248
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T+S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSS 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
>gi|116779303|gb|ABK21227.1| unknown [Picea sitchensis]
Length = 250
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG +GILA+DG++LA EKR T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGAAVGILAKDGVILAGEKRITSKLLQTSKST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKVDD 70
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG +GILA+DG++LA EKR+ S+L Q + E +
Sbjct: 17 RLYQVEYAMEAIGNAGAAVGILAKDGVILAGEKRIT---------SKLLQTSKSTEKMYK 67
Query: 63 -----AGTCLGILAQDGILL 77
A GI+A IL+
Sbjct: 68 VDDHVACAVAGIMADANILI 87
>gi|449456526|ref|XP_004146000.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
gi|449518445|ref|XP_004166252.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Cucumis
sativus]
gi|449518447|ref|XP_004166253.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Cucumis
sativus]
Length = 250
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YKL D
Sbjct: 63 EKMYKLDD 70
>gi|76160982|gb|ABA40454.1| proteasome alpha subunit-like protein [Solanum tuberosum]
Length = 256
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T+S
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSS 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
>gi|357506163|ref|XP_003623370.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355498385|gb|AES79588.1| Proteasome subunit alpha type [Medicago truncatula]
Length = 471
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 30 LLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
L+ +R + + RLYQVEYAMEAI +AGT +GIL++DG++L EK+ T+KLL
Sbjct: 219 LIKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQ 278
Query: 90 EGTTSEKIYKLHD 102
T++EK+YK+ D
Sbjct: 279 TSTSTEKMYKIDD 291
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AGT +GIL++DG++L EK++ S+L Q + E +
Sbjct: 238 RLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVT---------SKLLQTSTSTEKMYK 288
Query: 63 -----AGTCLGILAQDGILL 77
A GI++ IL+
Sbjct: 289 IDDHVACAVAGIMSDANILI 308
>gi|66813358|ref|XP_640858.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
gi|464458|sp|P34119.1|PSA4_DICDI RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Proteasome component DD4
gi|347509|gb|AAA33233.1| proteasome [Dictyostelium discoideum]
gi|60468781|gb|EAL66781.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
Length = 250
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT- 93
+R +Q + R+YQVEYAM AI HAG +GILA+DGI+LAAEK+ T KLLD T+
Sbjct: 3 RRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSI 62
Query: 94 SEKIYKLHD 102
SEK++K+ +
Sbjct: 63 SEKMFKIDE 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYAM AI HAG +GILA+DGI+LAAEK+
Sbjct: 17 RVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKK 50
>gi|389739970|gb|EIM81162.1| proteasome subunit alpha type 4 [Stereum hirsutum FP-91666 SS1]
Length = 262
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---- 90
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD+
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDQSAEK 62
Query: 91 ----GTTSEKIYKLHDSL 104
G + EKI+ L+ ++
Sbjct: 63 DGGYGGSGEKIFLLNSNV 80
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|14594915|emb|CAC43318.1| putative alpha3 proteasome subunit [Nicotiana tabacum]
Length = 167
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AG+ +GILA+DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 7 FSPE-GRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 65
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AG+ +GILA+DG++L EK++
Sbjct: 12 RLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKV 46
>gi|403412001|emb|CCL98701.1| predicted protein [Fibroporia radiculosa]
Length = 280
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 10/82 (12%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 20 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSGVK 79
Query: 90 ---EGTTSEKIYKLHDSLNIIT 108
G + EKI+ L+ N++T
Sbjct: 80 EGGYGGSGEKIFLLNS--NVVT 99
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 34 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 68
>gi|170093417|ref|XP_001877930.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164647789|gb|EDR12033.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 255
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSSAK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EKIY L+ ++
Sbjct: 63 DGGYGGSGEKIYLLNSNV 80
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|312071781|ref|XP_003138766.1| PAS-3 protein [Loa loa]
Length = 226
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +EKIY+L D++
Sbjct: 1 MEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLTEKIYRLADNI 48
>gi|170579539|ref|XP_001894874.1| proteasome subunit alpha type 4 [Brugia malayi]
gi|158598377|gb|EDP36283.1| proteasome subunit alpha type 4, putative [Brugia malayi]
Length = 226
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAISHAGTCLGILA DGIL+AAEKRN +KLLD+ +EKIY+L D++
Sbjct: 1 MEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVLTEKIYRLADNI 48
>gi|224139550|ref|XP_002323165.1| predicted protein [Populus trichocarpa]
gi|222867795|gb|EEF04926.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Query: 103 SLNI 106
+ +
Sbjct: 71 HVAV 74
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AG+ +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKV 51
>gi|1709761|sp|P52427.1|PSA4_SPIOL RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3; AltName: Full=Proteasome 27 kDa subunit
gi|1262146|emb|CAA65660.1| proteasome subunit [Spinacia oleracea]
Length = 250
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GILA+DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AG+ +GILA+DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKV 51
>gi|448119213|ref|XP_004203677.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
gi|359384545|emb|CCE78080.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
Length = 250
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAIS AGT +GIL+ +G++LA EK+ T+KLLD+ ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKVTSKLLDDDGSA 62
Query: 95 EKIYKLHDSL 104
EKIY+++D++
Sbjct: 63 EKIYEINDNM 72
>gi|448116740|ref|XP_004203095.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
gi|359383963|emb|CCE78667.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
Length = 250
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAIS AGT +GIL+ +G++LA EK+ T+KLLD+ ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKVTSKLLDDDGSA 62
Query: 95 EKIYKLHDSL 104
EKIY+++D++
Sbjct: 63 EKIYEINDNM 72
>gi|328771855|gb|EGF81894.1| hypothetical protein BATDEDRAFT_19045 [Batrachochytrium
dendrobatidis JAM81]
Length = 247
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL+QVEYAMEAISHAGT LG+L+ +GI+LAAE++ ++KLL E +
Sbjct: 3 RRYDSRTTIFSPEGRLFQVEYAMEAISHAGTALGVLSTEGIVLAAERKTSSKLL-ENISR 61
Query: 95 EKIYKLHDS 103
EKIY+L+D+
Sbjct: 62 EKIYRLNDT 70
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSR 49
RL+QVEYAMEAISHAGT LG+L+ +GI+LAAE++ + L ++SR
Sbjct: 17 RLFQVEYAMEAISHAGTALGVLSTEGIVLAAERKTSS--KLLENISR 61
>gi|430811466|emb|CCJ31107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 215
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL+QVEYA+EAIS AGT LG+LA+DGI+LAAEK+ +KLL++ T+S
Sbjct: 3 RRYDSRTTIFSPEGRLFQVEYALEAISRAGTALGVLAEDGIVLAAEKKVISKLLEQNTSS 62
Query: 95 EKIY 98
EK+Y
Sbjct: 63 EKLY 66
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 13/92 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR-----LNQDFSFLPHMSRLYQVEYAM 57
RL+QVEYA+EAIS AGT LG+LA+DGI+LAAEK+ L Q+ S +LY V+
Sbjct: 17 RLFQVEYALEAISRAGTALGVLAEDGIVLAAEKKVISKLLEQNTS----SEKLYVVD--- 69
Query: 58 EAISHAGTCL-GILAQDGILLAAEKRNTNKLL 88
E SH + GI A IL+ +R K L
Sbjct: 70 EYYSHMICAVAGITADANILIDYTRRTAQKYL 101
>gi|449448594|ref|XP_004142051.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
gi|449523001|ref|XP_004168513.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
Length = 249
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GIL+ DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSTDGVVLVGEKKVTSKLLQTSTST 62
Query: 95 EKIYKLHD 102
EK+YKL D
Sbjct: 63 EKMYKLDD 70
>gi|224086367|ref|XP_002307867.1| predicted protein [Populus trichocarpa]
gi|118484506|gb|ABK94128.1| unknown [Populus trichocarpa]
gi|222853843|gb|EEE91390.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI +AG+ +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKV 51
>gi|281201444|gb|EFA75654.1| proteasome subunit alpha type 4 [Polysphondylium pallidum PN500]
Length = 250
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG-TT 93
+R +Q + R+YQVEYAM AI HAG +GILAQDGI+LAAEK+ KLLD +
Sbjct: 3 RRYDQRTTIFSPEGRIYQVEYAMTAIRHAGATVGILAQDGIVLAAEKKTVAKLLDSSLSQ 62
Query: 94 SEKIYKLHD 102
SEK++K+ D
Sbjct: 63 SEKMFKIDD 71
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYAM AI HAG +GILAQDGI+LAAEK+
Sbjct: 17 RIYQVEYAMTAIRHAGATVGILAQDGIVLAAEKK 50
>gi|390602034|gb|EIN11427.1| 20S proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 260
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD T
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDMSGTQ 62
Query: 95 EKIY 98
E Y
Sbjct: 63 EGGY 66
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|297835202|ref|XP_002885483.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
lyrata]
gi|297331323|gb|EFH61742.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F SRLYQVEYAMEAI +AG+ +GIL+ DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 19 FFCFCSRLYQVEYAMEAIGNAGSAIGILSTDGVVLIGEKKVTSKLLQTSTSAEKMYKIDD 78
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
SRLYQVEYAMEAI +AG+ +GIL+ DG++L EK++
Sbjct: 24 SRLYQVEYAMEAIGNAGSAIGILSTDGVVLIGEKKVT 60
>gi|255540109|ref|XP_002511119.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223550234|gb|EEF51721.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 250
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG +L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG +L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVT 52
>gi|255540107|ref|XP_002511118.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223550233|gb|EEF51720.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 250
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AGT +GIL++DG +L EK+ T+KLL T++EK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVTSKLLQTSTSTEKMYKIDD 70
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AGT +GIL++DG +L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVT 52
>gi|238568117|ref|XP_002386375.1| hypothetical protein MPER_15404 [Moniliophthora perniciosa FA553]
gi|215438155|gb|EEB87305.1| hypothetical protein MPER_15404 [Moniliophthora perniciosa FA553]
Length = 62
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 8/61 (13%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD--------EGTTSEKIYKL 100
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD G + EKIY L
Sbjct: 1 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSYTKDGGYGGSGEKIYLL 60
Query: 101 H 101
+
Sbjct: 61 N 61
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ---DFSF 43
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++ D S+
Sbjct: 1 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSY 44
>gi|348676338|gb|EGZ16156.1| hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae]
Length = 250
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYAMEAI++AG+ +GILA+DGI++AAEK+ +KLL TSEK KL
Sbjct: 11 TFSPE-GRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLD 69
Query: 102 DSL 104
D L
Sbjct: 70 DHL 72
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 33/34 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYAMEAI++AG+ +GILA+DGI++AAEK+
Sbjct: 17 RLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKK 50
>gi|301122141|ref|XP_002908797.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
gi|23394356|gb|AAN31468.1| proteasome subunit [Phytophthora infestans]
gi|262099559|gb|EEY57611.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
Length = 250
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYAMEAI++AG+ +GILA+DGI++AAEK+ +KLL TSEK KL
Sbjct: 11 TFSPE-GRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLD 69
Query: 102 DSL 104
D L
Sbjct: 70 DHL 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 33/34 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYAMEAI++AG+ +GILA+DGI++AAEK+
Sbjct: 17 RLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKK 50
>gi|392593504|gb|EIW82829.1| N-terminal nucleophile aminohydrolase [Coniophora puteana
RWD-64-598 SS2]
Length = 261
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEKR T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKRVTGKLLDLSGAK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EK++ L+ ++
Sbjct: 63 DGGYGGSGEKMFLLNSNV 80
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEKR+
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKRV 51
>gi|302680901|ref|XP_003030132.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
gi|300103823|gb|EFI95229.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
Length = 263
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDMSLAK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EKI+ L+ ++
Sbjct: 63 DGGYGGSGEKIFLLNSNV 80
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|449546689|gb|EMD37658.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 261
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSGVK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EKI+ L+ ++
Sbjct: 63 EGGYGGSGEKIFLLNSNV 80
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 16 GRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVT 52
>gi|409075171|gb|EKM75554.1| hypothetical protein AGABI1DRAFT_64309 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192125|gb|EKV42063.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 262
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLTGAK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EKI+ L+ ++
Sbjct: 63 AGGYGGSGEKIFLLNSNV 80
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|193875858|gb|ACF24565.1| proteasome alpha 4 subunit [Gymnochlora stellata]
Length = 249
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL+QVEYAMEAIS AG+ + +LA DG+LLAAEKR T+KLLD +
Sbjct: 3 RRYDSHTTIFSPQGRLFQVEYAMEAISKAGSAVALLASDGVLLAAEKRITSKLLDIRGLA 62
Query: 95 EKIYKLHDSLNI 106
EK+YK+ D + +
Sbjct: 63 EKMYKIDDHVAV 74
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYAMEAIS AG+ + +LA DG+LLAAEKR+
Sbjct: 17 RLFQVEYAMEAISKAGSAVALLASDGVLLAAEKRI 51
>gi|338717745|ref|XP_001489121.2| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Equus
caballus]
Length = 237
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAI HAGTCLGILA DG+LLAAE+RN +KLLDE SEKIYKL++ +
Sbjct: 1 MEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDM 48
>gi|395822594|ref|XP_003784601.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Otolemur
garnettii]
gi|395822596|ref|XP_003784602.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Otolemur
garnettii]
gi|33604016|gb|AAH56249.1| PSMA4 protein [Homo sapiens]
Length = 237
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAI HAGTCLGILA DG+LLAAE+RN +KLLDE SEKIYKL++ +
Sbjct: 1 MEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDM 48
>gi|299752286|ref|XP_001830819.2| proteasome subunit alpha type 4 [Coprinopsis cinerea
okayama7#130]
gi|298409764|gb|EAU90883.2| proteasome subunit alpha type 4 [Coprinopsis cinerea
okayama7#130]
Length = 261
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSSSK 62
Query: 95 EKIY 98
E Y
Sbjct: 63 EGGY 66
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|119619571|gb|EAW99165.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
CRA_b [Homo sapiens]
Length = 225
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAI HAGTCLGILA DG+LLAAE+RN +KLLDE SEKIYKL++ +
Sbjct: 1 MEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDM 48
>gi|12229904|sp|O82530.1|PSA4_PETHY RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|3608483|gb|AAC35982.1| proteasome alpha subunit [Petunia x hybrida]
Length = 249
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAI +AG+ +GI ++DG++L EK+ T+KLL T+SEK+YK+ D
Sbjct: 12 FSPE-GRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDD 70
>gi|15233268|ref|NP_188850.1| proteasome subunit alpha type-4 [Arabidopsis thaliana]
gi|12643237|sp|O81148.1|PSA4_ARATH RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C-1; AltName: Full=Proteasome
27 kDa subunit; AltName: Full=Proteasome component 9;
AltName: Full=Proteasome subunit alpha type-3
gi|14423432|gb|AAK62398.1|AF386953_1 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|3421077|gb|AAC32057.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|11994731|dbj|BAB03060.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|21554045|gb|AAM63126.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|23197586|gb|AAN15320.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|332643070|gb|AEE76591.1| proteasome subunit alpha type-4 [Arabidopsis thaliana]
Length = 250
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSA 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAI +AG+ +GIL++DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVT 52
>gi|50416403|ref|XP_457549.1| DEHA2B13860p [Debaryomyces hansenii CBS767]
gi|49653214|emb|CAG85559.1| DEHA2B13860p [Debaryomyces hansenii CBS767]
Length = 250
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AGT +GIL+ +G++LA EK+ T+KLLD+ ++EK+Y L+D
Sbjct: 12 FSPE-GRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKFTSKLLDDDGSAEKLYVLND 70
Query: 103 SL 104
++
Sbjct: 71 NM 72
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT +GIL+ +G++LA EK+
Sbjct: 17 RLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKF 51
>gi|323449973|gb|EGB05857.1| hypothetical protein AURANDRAFT_60228 [Aureococcus anophagefferens]
Length = 256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +++ + RL+QVEYA+EAI++AGT +G+LA DG+++A EK+ KLL+ +S
Sbjct: 3 RRYDRNVTTFSPEGRLHQVEYAVEAINNAGTAVGLLATDGVVMAGEKQKVTKLLEPPKSS 62
Query: 95 EKIYKLHDSLNII 107
EKIYKL D + +
Sbjct: 63 EKIYKLDDHVACV 75
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMS-RLYQVEYAMEAIS 61
RL+QVEYA+EAI++AGT +G+LA DG+++A EK+ P S ++Y+++
Sbjct: 17 RLHQVEYAVEAINNAGTAVGLLATDGVVMAGEKQKVTKLLEPPKSSEKIYKLD------D 70
Query: 62 HAGTCLGILAQDGILLAAEKR 82
H + L D +L E R
Sbjct: 71 HVACVVAGLTADANILINEAR 91
>gi|219110765|ref|XP_002177134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411669|gb|EEC51597.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 264
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL- 100
+F P RL+QVEYA+EAI++AGTC+GILA+DGI++A+E+R T+ LL TSEK Y L
Sbjct: 11 TFSPE-GRLHQVEYAIEAINNAGTCVGILARDGIVMASERRITSGLLAPSKTSEKTYPLA 69
Query: 101 -HDSLNI 106
H + N+
Sbjct: 70 AHAACNV 76
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI++AGTC+GILA+DGI++A+E+R+ S L S+ + Y + A H
Sbjct: 17 RLHQVEYAIEAINNAGTCVGILARDGIVMASERRIT---SGLLAPSKTSEKTYPLAA--H 71
Query: 63 AGTCLGILAQDGILLAAEKR 82
A + L D +L + R
Sbjct: 72 AACNVAGLTADANILIEQAR 91
>gi|402224083|gb|EJU04146.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 10/81 (12%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+LA DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLATDGVVLAAEKKVTGKLLDLSVAK 62
Query: 90 ---EGTTSEKIYKLHDSLNII 107
G + EKI+ L+ N+I
Sbjct: 63 EGGYGGSGEKIFLLN--TNVI 81
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQ+EYAMEAISHAGT LG+LA DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLATDGVVLAAEKKVT 52
>gi|334186554|ref|NP_001190735.1| N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like
protein [Arabidopsis thaliana]
gi|332658164|gb|AEE83564.1| N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like
protein [Arabidopsis thaliana]
Length = 208
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ +GILA+DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSSSM 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 14/80 (17%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAI-- 60
RLYQVEYAMEAI +AG+ +GILA+DG++L EK++ S+L Q +ME +
Sbjct: 17 RLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVT---------SKLLQTSSSMEKMYK 67
Query: 61 --SHAGTCL-GILAQDGILL 77
H + GI++ IL+
Sbjct: 68 IDDHVACAVAGIMSDANILI 87
>gi|395333038|gb|EJF65416.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 261
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT LG+L++DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLSKDGVVLAAEKKVTGKLLDMSIAK 62
Query: 90 ---EGTTSEKIYKLHDSL 104
G + EKI+ L+ ++
Sbjct: 63 EGGYGGSGEKIFLLNSNV 80
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+L++DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLSKDGVVLAAEKKV 51
>gi|328874968|gb|EGG23333.1| proteasome subunit alpha type 4 [Dictyostelium fasciculatum]
Length = 250
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT- 93
+R +Q + R+YQVEYAM AI HAG +GILA DGI+LAAEK+ KLLD T
Sbjct: 3 RRYDQRTTIFSPEGRIYQVEYAMAAIRHAGATVGILASDGIVLAAEKKTIAKLLDSSKTQ 62
Query: 94 SEKIYKLHD 102
+EK++K+ D
Sbjct: 63 AEKMFKIDD 71
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYAM AI HAG +GILA DGI+LAAEK+
Sbjct: 17 RIYQVEYAMAAIRHAGATVGILASDGIVLAAEKK 50
>gi|255070011|ref|XP_002507087.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
gi|226522362|gb|ACO68345.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
Length = 248
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAISHAG +GI G++LAAEK+ +KLL+ GT SEK++KL
Sbjct: 11 TFSPE-GRLYQVEYAMEAISHAGAAVGIRTNFGVVLAAEKKILSKLLEIGTASEKMHKLD 69
Query: 102 DSLNI 106
D + +
Sbjct: 70 DHIAV 74
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAG +GI G++LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGAAVGIRTNFGVVLAAEKKI 51
>gi|336371832|gb|EGO00172.1| hypothetical protein SERLA73DRAFT_180614 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384584|gb|EGO25732.1| hypothetical protein SERLADRAFT_466291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 261
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
+R + + RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLD 57
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT LG+LA+DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKV 51
>gi|255726496|ref|XP_002548174.1| proteasome component Y13 [Candida tropicalis MYA-3404]
gi|240134098|gb|EER33653.1| proteasome component Y13 [Candida tropicalis MYA-3404]
Length = 251
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS+AGT +GIL+ +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
+
Sbjct: 71 QM 72
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS+AGT +GIL+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKV 51
>gi|241953109|ref|XP_002419276.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223642616|emb|CAX42866.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 251
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS+AGT +GIL+ +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
+
Sbjct: 71 QM 72
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS+AGT +GIL+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKV 51
>gi|242094848|ref|XP_002437914.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
gi|241916137|gb|EER89281.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
Length = 148
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 34 EKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT 93
+R + + RLYQVEYAMEAI +AG+ LGILA DG++L EK+ T+KLL +
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSRS 61
Query: 94 SEKIYKLHDSL 104
+EK+YK+ L
Sbjct: 62 AEKMYKIDSHL 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDF 41
RLYQVEYAMEAI +AG+ LGILA DG++L EK++
Sbjct: 17 RLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKL 55
>gi|68471743|ref|XP_720178.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
gi|68472004|ref|XP_720045.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
gi|46441895|gb|EAL01189.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
gi|46442033|gb|EAL01326.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
gi|238880739|gb|EEQ44377.1| proteasome component Y13 [Candida albicans WO-1]
Length = 251
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS+AGT +GIL+ +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISNAGTAIGILSPEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
+
Sbjct: 71 QM 72
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS+AGT +GIL+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISNAGTAIGILSPEGVVLACEKKV 51
>gi|354547914|emb|CCE44649.1| hypothetical protein CPAR2_404530 [Candida parapsilosis]
Length = 252
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AGT LGI++ +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISMAGTALGIVSSEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
L
Sbjct: 71 QL 72
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT LGI++ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISMAGTALGIVSSEGVVLACEKKV 51
>gi|2511584|emb|CAA73624.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 250
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEY MEAI +AG+ +GIL++DG++L EK+ T+KLL T++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYVMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSA 62
Query: 95 EKIYKLHD 102
EK+YK+ D
Sbjct: 63 EKMYKIDD 70
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEY MEAI +AG+ +GIL++DG++L EK++
Sbjct: 17 RLYQVEYVMEAIGNAGSAIGILSKDGVVLIGEKKVT 52
>gi|452822764|gb|EME29780.1| 20S proteasome subunit alpha 3 [Galdieria sulphuraria]
Length = 250
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISHAG +G+L+Q+G++LAAEK+ +KLL+ ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGAAVGVLSQEGVVLAAEKKIISKLLETAKST 62
Query: 95 EKIYKL 100
EK+Y +
Sbjct: 63 EKMYAI 68
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAG +G+L+Q+G++LAAEK++
Sbjct: 17 RLYQVEYAMEAISHAGAAVGVLSQEGVVLAAEKKI 51
>gi|357125152|ref|XP_003564259.1| PREDICTED: proteasome subunit alpha type-4-1-like [Brachypodium
distachyon]
Length = 250
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LGILA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQSSRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LGILA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVT---SKLLQSSRSAEKMYKID--SH 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ IL+ NT +L
Sbjct: 72 LACAVAGIMSDANILI-----NTARL 92
>gi|357125088|ref|XP_003564227.1| PREDICTED: proteasome subunit alpha type-4-1-like [Brachypodium
distachyon]
Length = 250
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LGILA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILASDGVVLVGEKKVTSKLLQASRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKVDSHL 72
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LGILA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGILASDGVVLVGEKKVT---SKLLQASRSAEKMYKVD--SH 71
Query: 63 -AGTCLGILAQDGILL 77
A GI++ IL+
Sbjct: 72 LACAVAGIMSDANILI 87
>gi|212721808|ref|NP_001131770.1| proteasome subunit alpha type [Zea mays]
gi|194692490|gb|ACF80329.1| unknown [Zea mays]
gi|413953010|gb|AFW85659.1| proteasome subunit alpha type [Zea mays]
Length = 250
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LGILA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LGILA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ IL+ NT +L
Sbjct: 72 LACAVAGIMSDANILI-----NTARL 92
>gi|212276233|ref|NP_001130843.1| uncharacterized protein LOC100191947 [Zea mays]
gi|194690254|gb|ACF79211.1| unknown [Zea mays]
gi|195606230|gb|ACG24945.1| proteasome subunit alpha type 4 [Zea mays]
gi|413943016|gb|AFW75665.1| proteasome C9 1 [Zea mays]
Length = 250
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LGILA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LGILA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ IL+ NT +L
Sbjct: 72 LACAVAGIMSDANILI-----NTARL 92
>gi|344301338|gb|EGW31650.1| hypothetical protein SPAPADRAFT_140464 [Spathaspora passalidarum
NRRL Y-27907]
Length = 253
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AGT +GIL+ +G++LA EK+ T+KLLD ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISMAGTAIGILSSEGVVLACEKKVTSKLLDNDGSAEKLYIIND 70
Query: 103 SL 104
++
Sbjct: 71 NM 72
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT +GIL+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISMAGTAIGILSSEGVVLACEKKV 51
>gi|388459630|gb|AFK31630.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 227
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSSEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A G+++ ILL NT +L
Sbjct: 71 LACAVAGVMSDANILL-----NTARL 91
>gi|126133210|ref|XP_001383130.1| hypothetical protein PICST_81403 [Scheffersomyces stipitis CBS
6054]
gi|126094955|gb|ABN65101.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 253
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AGT +GIL+ +G++LA EK+ T+KLLD ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISMAGTAIGILSTEGVVLACEKKVTSKLLDNDGSAEKLYVIND 70
Query: 103 SL 104
++
Sbjct: 71 NM 72
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT +GIL+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISMAGTAIGILSTEGVVLACEKKV 51
>gi|448522378|ref|XP_003868673.1| Pre9 alpha3 (C9) subunit of the 20S proteasome [Candida
orthopsilosis Co 90-125]
gi|380353013|emb|CCG25769.1| Pre9 alpha3 (C9) subunit of the 20S proteasome [Candida
orthopsilosis]
Length = 252
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AGT LGI + +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISMAGTALGIASSEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
L
Sbjct: 71 QL 72
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AGT LGI + +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISMAGTALGIASSEGVVLACEKKV 51
>gi|388459651|gb|AFK31640.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459624|gb|AFK31627.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459626|gb|AFK31628.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459632|gb|AFK31631.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459638|gb|AFK31634.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459641|gb|AFK31635.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459645|gb|AFK31637.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459659|gb|AFK31644.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|115466708|ref|NP_001056953.1| Os06g0176000 [Oryza sativa Japonica Group]
gi|109892867|sp|P0C1G8.1|PSA4A_ORYSJ RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|223635743|sp|A2Y9X7.2|PSA4A_ORYSI RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|8096319|dbj|BAA95822.1| putative proteasome subunit [Oryza sativa Japonica Group]
gi|8096329|dbj|BAA95832.1| putative proteasome subunit alpha type 4 [Oryza sativa Japonica
Group]
gi|8671496|dbj|BAA96831.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594993|dbj|BAF18867.1| Os06g0176000 [Oryza sativa Japonica Group]
gi|125596234|gb|EAZ36014.1| hypothetical protein OsJ_20320 [Oryza sativa Japonica Group]
Length = 250
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 72 LACAVAGIMSDANILL-----NTARL 92
>gi|388459653|gb|AFK31641.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459628|gb|AFK31629.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459636|gb|AFK31633.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459643|gb|AFK31636.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRSTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|115466646|ref|NP_001056922.1| Os06g0167600 [Oryza sativa Japonica Group]
gi|75287537|sp|Q5VRG3.1|PSA4B_ORYSJ RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|229564386|sp|P0C8Y9.1|PSA4B_ORYSI RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|5091520|dbj|BAA78755.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|55296221|dbj|BAD67962.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594962|dbj|BAF18836.1| Os06g0167600 [Oryza sativa Japonica Group]
gi|215695502|dbj|BAG90693.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197662|gb|EEC80089.1| hypothetical protein OsI_21826 [Oryza sativa Indica Group]
gi|222635030|gb|EEE65162.1| hypothetical protein OsJ_20263 [Oryza sativa Japonica Group]
Length = 250
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 17 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 71
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 72 LACAVAGIMSDANILL-----NTARL 92
>gi|388459663|gb|AFK31646.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A G+++ ILL NT +L
Sbjct: 71 LACAVAGVMSDANILL-----NTARL 91
>gi|145343708|ref|XP_001416455.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
lucimarinus CCE9901]
gi|144576680|gb|ABO94748.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
lucimarinus CCE9901]
Length = 231
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+E+++HAGTC+G+ ++GILLA+EK+ +KLL++ +T EK++K+
Sbjct: 11 TFSPE-GRLFQVEYALESVNHAGTCIGLHTENGILLASEKKIMSKLLEQSSTPEKLWKI 68
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+E+++HAGTC+G+ ++GILLA+EK++
Sbjct: 17 RLFQVEYALESVNHAGTCIGLHTENGILLASEKKI 51
>gi|308799916|ref|XP_003074739.1| Pac1 Proteasome subunit alpha type 4 (IC) [Ostreococcus tauri]
gi|119358782|emb|CAL51997.2| Pac1 Proteasome subunit alpha type 4 (IC), partial [Ostreococcus
tauri]
Length = 228
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+E+++HAGTC+G+ G+LLA+EK+ +KLL++ +T EK++K+
Sbjct: 8 TFSPE-GRLFQVEYALESVNHAGTCVGLRTNTGVLLASEKKTMSKLLEQSSTPEKLWKID 66
Query: 102 DSLNI 106
+ I
Sbjct: 67 KHIVI 71
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 30/34 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYA+E+++HAGTC+G+ G+LLA+EK+
Sbjct: 14 RLFQVEYALESVNHAGTCVGLRTNTGVLLASEKK 47
>gi|392569475|gb|EIW62648.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 268
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 10/82 (12%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAG +G+L++DG++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGIVIGVLSKDGVVLAAEKKVTGKLLDMSGAT 62
Query: 90 ---EGTTSEKIYKLHDSLNIIT 108
G + EKI+ L+ N+I+
Sbjct: 63 GGSYGGSGEKIFLLNS--NVIS 82
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAG +G+L++DG++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGIVIGVLSKDGVVLAAEKKV 51
>gi|388459649|gb|AFK31639.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL +
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRPA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRPAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459657|gb|AFK31643.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL +
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRPA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRPAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|393245297|gb|EJD52808.1| proteasome subunit alpha type 4 [Auricularia delicata TFB-10046
SS5]
Length = 261
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD----- 89
+R + + RLYQ+EYAMEAISHAGT L +LA+DG+++AAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLAVLAKDGVVVAAEKKVTGKLLDLSSVK 62
Query: 90 ---EGTTSEKIYKLH 101
G + EKI+ L+
Sbjct: 63 EGGYGGSGEKIFLLN 77
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQ+EYAMEAISHAGT L +LA+DG+++AAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLAVLAKDGVVVAAEKKV 51
>gi|302833389|ref|XP_002948258.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
gi|300266478|gb|EFJ50665.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
Length = 253
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---G 91
+R + + RLYQVEYAMEAIS+AG +G+LA+DGI+L AEK+ T+KLLD G
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGIVLVAEKKITSKLLDTHAVG 62
Query: 92 TTSEKIYKLHDSL 104
EK+Y++ + +
Sbjct: 63 VRREKMYRIDNHI 75
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAIS+AG +G+LA+DGI+L AEK++
Sbjct: 17 RLYQVEYAMEAISNAGASIGLLAKDGIVLVAEKKI 51
>gi|388459655|gb|AFK31642.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+Y++ L
Sbjct: 62 EKMYRIDSHL 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYRID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|440294109|gb|ELP87130.1| proteasome subunit alpha type-4, putative [Entamoeba invadens IP1]
Length = 250
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P RLYQVEYAMEAISH+ + +GIL +DGILLAA+K+ +L+D S+K+Y+L
Sbjct: 12 FSPE-GRLYQVEYAMEAISHSSSAIGILCKDGILLAAKKKRVARLIDRSRDSDKMYEL 68
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAISH+ + +GIL +DGILLAA+K+
Sbjct: 17 RLYQVEYAMEAISHSSSAIGILCKDGILLAAKKK 50
>gi|397612435|gb|EJK61739.1| hypothetical protein THAOC_17719 [Thalassiosira oceanica]
Length = 309
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI++AGT +GILA+DG+++A+EK+ T+ LL TSEK YKL
Sbjct: 11 TFSPE-GRLHQVEYAIEAINNAGTSVGILAKDGVVMASEKKVTSGLLAPARTSEKTYKL 68
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI++AGT +GILA+DG+++A+EK++ S L +R + Y + H
Sbjct: 17 RLHQVEYAIEAINNAGTSVGILAKDGVVMASEKKVT---SGLLAPARTSEKTYKL--CPH 71
Query: 63 AGTCLGILAQDGILLAAEKR 82
A + L D +L + R
Sbjct: 72 ATCSVAGLTADANILIDQAR 91
>gi|67480423|ref|XP_655561.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|56472713|gb|EAL50177.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702243|gb|EMD42919.1| proteasome alpha subunit, putative [Entamoeba histolytica KU27]
Length = 249
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISH+ + +GILA DGILLAA+K+ +L+D +
Sbjct: 3 RRYDSRTTMFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGA 62
Query: 95 EKIYKLHDSL 104
+K+Y+L + +
Sbjct: 63 DKMYELDEHI 72
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAISH+ + +GILA DGILLAA+K+
Sbjct: 17 RLYQVEYAMEAISHSSSAIGILATDGILLAAKKK 50
>gi|167382545|ref|XP_001736156.1| proteasome subunit alpha type-4 [Entamoeba dispar SAW760]
gi|167387931|ref|XP_001738368.1| proteasome subunit alpha type-4 [Entamoeba dispar SAW760]
gi|165898463|gb|EDR25311.1| proteasome subunit alpha type-4, putative [Entamoeba dispar SAW760]
gi|165901595|gb|EDR27673.1| proteasome subunit alpha type-4, putative [Entamoeba dispar SAW760]
Length = 249
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAISH+ + +GILA DGILLAA+K+ +L+D +
Sbjct: 3 RRYDSRTTMFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGA 62
Query: 95 EKIYKLHDSL 104
+K+Y+L + +
Sbjct: 63 DKMYELDEHI 72
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAISH+ + +GILA DGILLAA+K+
Sbjct: 17 RLYQVEYAMEAISHSSSAIGILATDGILLAAKKK 50
>gi|67469051|ref|XP_650517.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467152|gb|EAL45131.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703605|gb|EMD44025.1| proteasome alpha subunit, putative [Entamoeba histolytica KU27]
Length = 239
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEAISH+ + +GILA DGILLAA+K+ +L+D ++K+Y+L +
Sbjct: 2 FSPE-GRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGADKMYELDE 60
Query: 103 SL 104
+
Sbjct: 61 HI 62
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAISH+ + +GILA DGILLAA+K+
Sbjct: 7 RLYQVEYAMEAISHSSSAIGILATDGILLAAKKK 40
>gi|393217727|gb|EJD03216.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 263
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
+R + + RLYQ+EYAMEAISHAGT LG+L+++G++LAAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLSKEGVVLAAEKKVTGKLLD 57
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 34/36 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQ+EYAMEAISHAGT LG+L+++G++LAAEK++
Sbjct: 17 RLYQIEYAMEAISHAGTVLGVLSKEGVVLAAEKKVT 52
>gi|344230978|gb|EGV62863.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
gi|344230979|gb|EGV62864.1| hypothetical protein CANTEDRAFT_115796 [Candida tenuis ATCC 10573]
Length = 248
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA E+IS AGT +GIL ++G++LA EK+ T+KLLD ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQESISMAGTAMGILTKEGVVLACEKKFTSKLLDNDGSAEKLYIIND 70
Query: 103 SL 104
+
Sbjct: 71 RM 72
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA E+IS AGT +GIL ++G++LA EK+
Sbjct: 17 RLYQVEYAQESISMAGTAMGILTKEGVVLACEKKF 51
>gi|294931563|ref|XP_002779937.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239889655|gb|EER11732.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAI++AG+ +G+L + ++LA EK+ +KLL+ G SEKIY +
Sbjct: 11 TFSPE-GRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPID 69
Query: 102 D 102
D
Sbjct: 70 D 70
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI++AG+ +G+L + ++LA EK+
Sbjct: 17 RLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKK 50
>gi|294925361|ref|XP_002778904.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239887750|gb|EER10699.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAI++AG+ +G+L + ++LA EK+ +KLL+ G SEKIY +
Sbjct: 11 TFSPE-GRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPID 69
Query: 102 D 102
D
Sbjct: 70 D 70
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI++AG+ +G+L + ++LA EK+
Sbjct: 17 RLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKK 50
>gi|294891066|ref|XP_002773403.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239878556|gb|EER05219.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAI++AG+ +G+L + ++LA EK+ +KLL+ G SEKIY +
Sbjct: 11 TFSPE-GRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPID 69
Query: 102 D 102
D
Sbjct: 70 D 70
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI++AG+ +G+L + ++LA EK+
Sbjct: 17 RLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKK 50
>gi|159489306|ref|XP_001702638.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
gi|158280660|gb|EDP06417.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
Length = 253
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE---G 91
+R + + RLYQVEYAMEAIS+AG +G+LA+DG++L AEK+ T+KLLD G
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHAVG 62
Query: 92 TTSEKIYKLHD 102
EK+Y++ +
Sbjct: 63 VRREKMYRIDN 73
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 32/36 (88%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYAMEAIS+AG +G+LA+DG++L AEK++
Sbjct: 17 RLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKIT 52
>gi|388459647|gb|AFK31638.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + R YQVEYAMEAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRPYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R YQVEYAMEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RPYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|388459634|gb|AFK31632.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYAMEAI +AG+ L +LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALAVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYAMEAI +AG+ L +LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLYQVEYAMEAIGNAGSALAVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LARAVAGIMSDANILL-----NTARL 91
>gi|223999683|ref|XP_002289514.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
gi|220974722|gb|EED93051.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI++AGT +GILA+DG+++A+E++ T+ LL TSEK YKL
Sbjct: 11 TFSPE-GRLHQVEYAIEAINNAGTSVGILARDGVVMASERKVTSGLLAPARTSEKTYKL 68
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI++AGT +GILA+DG+++A+E+++ S L +R + Y + H
Sbjct: 17 RLHQVEYAIEAINNAGTSVGILARDGVVMASERKVT---SGLLAPARTSEKTYKL--CPH 71
Query: 63 AGTCLGILAQDGILLAAEKR 82
A + L D +L + R
Sbjct: 72 ATCTVAGLTADANILIDQAR 91
>gi|149240485|ref|XP_001526118.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450241|gb|EDK44497.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
Length = 251
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EAIS AG +GI+ +G++LA EK+ T+KLLD+ ++EK+Y ++D
Sbjct: 12 FSPE-GRLYQVEYAQEAISMAGAAIGIVTSEGVVLACEKKVTSKLLDDDGSAEKLYIIND 70
Query: 103 SL 104
+
Sbjct: 71 QM 72
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS AG +GI+ +G++LA EK++
Sbjct: 17 RLYQVEYAQEAISMAGAAIGIVTSEGVVLACEKKV 51
>gi|297607192|ref|NP_001059598.2| Os07g0468800 [Oryza sativa Japonica Group]
gi|255677751|dbj|BAF21512.2| Os07g0468800 [Oryza sativa Japonica Group]
Length = 207
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 32 AAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
A +R + + RLYQV+YAMEAI +AG+ L +LA DG++L EK+ T+KLL
Sbjct: 51 AMSRRYDSRMTIFSPEGRLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVTSKLLQTS 110
Query: 92 TTSEKIYKLHDSL 104
++EK+YK+ L
Sbjct: 111 CSAEKMYKIDSHL 123
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 19/90 (21%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAI-- 60
RLYQV+YAMEAI +AG+ L +LA DG++L EK++ S+L Q + E +
Sbjct: 68 RLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVT---------SKLLQTSCSAEKMYK 118
Query: 61 --SH-AGTCLGILAQDGILLAAEKRNTNKL 87
SH A GI++ ILL NT +L
Sbjct: 119 IDSHLACAVAGIMSDANILL-----NTARL 143
>gi|260951467|ref|XP_002620030.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
gi|238847602|gb|EEQ37066.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
Length = 248
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA EAIS+AGT +GIL+ +G++LA E + +KLLD ++
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAQEAISNAGTAIGILSAEGVVLACETKVISKLLDNDGSA 62
Query: 95 EKIYKLHDSL 104
EK+Y ++D +
Sbjct: 63 EKLYVINDQM 72
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EAIS+AGT +GIL+ +G++LA E ++
Sbjct: 17 RLYQVEYAQEAISNAGTAIGILSAEGVVLACETKV 51
>gi|34978952|gb|AAQ83685.1| proteasome subunit alpha-3 [Allium sativum]
Length = 144
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 52 QVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
QVEYAMEAI +AG+ +GILA+DG++L EK+ T+KLL ++EK+YK+ D L
Sbjct: 1 QVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSKSTEKMYKIDDHL 53
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 6 QVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
QVEYAMEAI +AG+ +GILA+DG++L EK++
Sbjct: 1 QVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVT 33
>gi|125600168|gb|EAZ39744.1| hypothetical protein OsJ_24182 [Oryza sativa Japonica Group]
Length = 186
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQV+YAMEAI +AG+ L +LA DG++L EK+ T+KLL ++
Sbjct: 3 RRYDSRMTIFSPEGRLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVTSKLLQTSCSA 62
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 63 EKMYKIDSHL 72
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 19/90 (21%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAI-- 60
RLYQV+YAMEAI +AG+ L +LA DG++L EK++ S+L Q + E +
Sbjct: 17 RLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVT---------SKLLQTSCSAEKMYK 67
Query: 61 --SH-AGTCLGILAQDGILLAAEKRNTNKL 87
SH A GI++ ILL NT +L
Sbjct: 68 IDSHLACAVAGIMSDANILL-----NTARL 92
>gi|58268316|ref|XP_571314.1| proteasome subunit alpha type 4 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113158|ref|XP_774604.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257248|gb|EAL19957.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227549|gb|AAW44007.1| proteasome subunit alpha type 4, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 285
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
+R + + RLYQVEYAMEAISHAGT L +L+++GI +AAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLSKEGIAMAAEKKVTGKLLD 57
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ---DFSFLP 45
RLYQVEYAMEAISHAGT L +L+++GI +AAEK++ D S P
Sbjct: 17 RLYQVEYAMEAISHAGTVLAVLSKEGIAMAAEKKVTGKLLDLSLTP 62
>gi|303274280|ref|XP_003056462.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
gi|226462546|gb|EEH59838.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
Length = 247
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYAMEAISHAG +GI G++LAAEK+ +KLL+ SEK++KL
Sbjct: 11 TFSPD-GRLFQVEYAMEAISHAGAAVGIRTDFGVVLAAEKKILSKLLETSEASEKMFKLD 69
Query: 102 DSLNI 106
++ +
Sbjct: 70 ANIAV 74
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYAMEAISHAG +GI G++LAAEK++
Sbjct: 17 RLFQVEYAMEAISHAGAAVGIRTDFGVVLAAEKKI 51
>gi|392573949|gb|EIW67087.1| hypothetical protein TREMEDRAFT_45506 [Tremella mesenterica DSM
1558]
Length = 289
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
+R + + RLYQVEYAMEAISHAGT L +L+++GI +AAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLSKEGIAIAAEKKVTGKLLD 57
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAISHAGT L +L+++GI +AAEK++
Sbjct: 17 RLYQVEYAMEAISHAGTVLAVLSKEGIAIAAEKKV 51
>gi|209878941|ref|XP_002140911.1| proteasome subunit alpha type 4 [Cryptosporidium muris RN66]
gi|209556517|gb|EEA06562.1| proteasome subunit alpha type 4, putative [Cryptosporidium muris
RN66]
Length = 251
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYA+EAI+ A +GIL +DG++LAA+K +KLLD G T EK+Y +
Sbjct: 11 TFSPD-GRLYQVEYALEAINKAAPTIGILCKDGVILAADKAVVSKLLDPGRTLEKLYTID 69
Query: 102 DSL 104
+ +
Sbjct: 70 NHI 72
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI+ A +GIL +DG++LAA+K
Sbjct: 17 RLYQVEYALEAINKAAPTIGILCKDGVILAADK 49
>gi|321260178|ref|XP_003194809.1| proteasome subunit alpha type 4 [Cryptococcus gattii WM276]
gi|317461281|gb|ADV23022.1| proteasome subunit alpha type 4, putative [Cryptococcus gattii
WM276]
Length = 285
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
+R + + RLYQVEYAMEAISHAGT L +L ++GI +AAEK+ T KLLD
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLCKEGIAMAAEKKVTGKLLD 57
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ---DFSFLP 45
RLYQVEYAMEAISHAGT L +L ++GI +AAEK++ D S P
Sbjct: 17 RLYQVEYAMEAISHAGTVLAVLCKEGIAMAAEKKVTGKLLDLSLTP 62
>gi|388459661|gb|AFK31645.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RL QVEYA+EAI +AG+ LG+LA DG++L EK+ T+KLL ++
Sbjct: 2 RRYDSRTTIFSPEGRLCQVEYAVEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSA 61
Query: 95 EKIYKLHDSL 104
EK+YK+ L
Sbjct: 62 EKMYKIDSHL 71
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL QVEYA+EAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH
Sbjct: 16 RLCQVEYAVEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SH 70
Query: 63 -AGTCLGILAQDGILLAAEKRNTNKL 87
A GI++ ILL NT +L
Sbjct: 71 LACAVAGIMSDANILL-----NTARL 91
>gi|195505362|ref|XP_002099471.1| GE23336 [Drosophila yakuba]
gi|194185572|gb|EDW99183.1| GE23336 [Drosophila yakuba]
Length = 253
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S + TCLGILA +G+LLA E R+ +KLLD + +I +L++
Sbjct: 12 FSPE-GRLYQVEYAMEAASQSSTCLGILAHNGVLLATE-RSVDKLLDSSIPAPRICRLNE 69
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S + TCLGILA +G+LLA E+ +++ D S P + RL
Sbjct: 17 RLYQVEYAMEAASQSSTCLGILAHNGVLLATERSVDKLLDSSIPAPRICRL 67
>gi|195575239|ref|XP_002105587.1| GD16600 [Drosophila simulans]
gi|194201514|gb|EDX15090.1| GD16600 [Drosophila simulans]
Length = 257
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S +GTC+GILA++G+LLA E R+ +KL+D +I L++
Sbjct: 12 FSPE-GRLYQVEYAMEAASQSGTCVGILAKNGVLLATE-RSVDKLMDTSIPVPRISSLNE 69
Query: 103 SL 104
+
Sbjct: 70 DM 71
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S +GTC+GILA++G+LLA E+ +++ D S +P +S L
Sbjct: 17 RLYQVEYAMEAASQSGTCVGILAKNGVLLATERSVDKLMDTSIPVPRISSL 67
>gi|194905074|ref|XP_001981118.1| GG11887 [Drosophila erecta]
gi|190655756|gb|EDV52988.1| GG11887 [Drosophila erecta]
Length = 254
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S + TCLGILA++G++LA E R+ +KLLD + +I +L++
Sbjct: 12 FSPE-GRLYQVEYAMEAASQSNTCLGILAKNGVILATE-RSVDKLLDSSIPAPRICRLNE 69
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRLYQVEYAMEA 59
RLYQVEYAMEA S + TCLGILA++G++LA E+ +++ D S P + RL +
Sbjct: 17 RLYQVEYAMEAASQSNTCLGILAKNGVILATERSVDKLLDSSIPAPRICRLNE------- 69
Query: 60 ISHAGTCLGILAQDGILLAAEKR 82
A C DG +L E R
Sbjct: 70 --DAACCATGNKADGNVLTTELR 90
>gi|24850286|gb|AAN63094.1| testis-specific 20S proteasome subunit alpha 3T [Drosophila
melanogaster]
Length = 251
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S +GTC+G+LA++G+LLA E R+ +KL+D +I L++
Sbjct: 12 FSPE-GRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRISWLNE 69
Query: 103 SL 104
++
Sbjct: 70 NI 71
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S +GTC+G+LA++G+LLA E+ +++ D S +P +S L
Sbjct: 17 RLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
>gi|24651571|ref|NP_651843.1| proteasome alpha3T subunit [Drosophila melanogaster]
gi|12229947|sp|Q9VA12.1|PSA4L_DROME RecName: Full=Proteasome subunit alpha type-4-like
gi|7302012|gb|AAF57116.1| proteasome alpha3T subunit [Drosophila melanogaster]
Length = 251
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S +GTC+G+LA++G+LLA E R+ +KL+D +I L++
Sbjct: 12 FSPE-GRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRISWLNE 69
Query: 103 SL 104
++
Sbjct: 70 NI 71
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S +GTC+G+LA++G+LLA E+ +++ D S +P +S L
Sbjct: 17 RLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
>gi|189182100|gb|ACD81826.1| IP21535p [Drosophila melanogaster]
Length = 262
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYAMEA S +GTC+G+LA++G+LLA E R+ +KL+D +I L++
Sbjct: 23 FSPE-GRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRISWLNE 80
Query: 103 SL 104
++
Sbjct: 81 NI 82
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S +GTC+G+LA++G+LLA E+ +++ D S +P +S L
Sbjct: 28 RLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 78
>gi|406601407|emb|CCH46960.1| putative proteasome subunit alpha type-4 [Wickerhamomyces
ciferrii]
Length = 230
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNT 84
+R + + RLYQVEYA+EAISHAGT +GILA DGI+LAAE++ T
Sbjct: 4 RRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAERKVT 53
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA+EAISHAGT +GILA DGI+LAAE+++
Sbjct: 18 RLYQVEYALEAISHAGTAIGILATDGIVLAAERKV 52
>gi|323509271|dbj|BAJ77528.1| cgd4_250 [Cryptosporidium parvum]
Length = 261
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +GIL ++G++L A+K +KLLD+G + EKIY +
Sbjct: 11 TFSPE-GRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLLDQGKSLEKIYTI 68
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GIL ++G++L A+K
Sbjct: 17 RLYQVEYALEAINNAAPTVGILCKEGVILGADK 49
>gi|66356910|ref|XP_625633.1| proteasome subunit alpha type 4, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226753|gb|EAK87732.1| proteasome subunit alpha type 4, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 271
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 29 ILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+L+ +R + + RLYQVEYA+EAI++A +GIL ++G++L A+K +KLL
Sbjct: 7 LLVEMSRRYDSRTTTFSPEGRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLL 66
Query: 89 DEGTTSEKIYKL 100
D+G + EKIY +
Sbjct: 67 DQGKSLEKIYTI 78
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GIL ++G++L A+K
Sbjct: 27 RLYQVEYALEAINNAAPTVGILCKEGVILGADK 59
>gi|67587330|ref|XP_665249.1| proteasome subunit [Cryptosporidium hominis TU502]
gi|54655817|gb|EAL35019.1| proteasome subunit [Cryptosporidium hominis]
Length = 261
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +GIL ++G++L A+K +KLLD+G + EKIY +
Sbjct: 11 TFSPE-GRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLLDQGKSLEKIYTI 68
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GIL ++G++L A+K
Sbjct: 17 RLYQVEYALEAINNAAPTVGILCKEGVILGADK 49
>gi|84997473|ref|XP_953458.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65304454|emb|CAI76833.1| proteasome subunit, putative [Theileria annulata]
Length = 254
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +G+L G++L A+K ++KLLD G +EK+YKL
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASLTVGVLCNSGVVLVADKPISSKLLDPGKINEKLYKL 68
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA+EAI++A +G+L G++L A+K ++
Sbjct: 17 RLYQVEYALEAINNASLTVGVLCNSGVVLVADKPIS 52
>gi|71029642|ref|XP_764464.1| proteasome subunit alpha type [Theileria parva strain Muguga]
gi|68351418|gb|EAN32181.1| proteasome subunit alpha type, putative [Theileria parva]
Length = 254
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +G+L G++L A+K ++KLLD G +EK+YKL
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASLTVGVLCSSGVVLVADKPISSKLLDPGKINEKLYKL 68
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA+EAI++A +G+L G++L A+K ++
Sbjct: 17 RLYQVEYALEAINNASLTVGVLCSSGVVLVADKPIS 52
>gi|429329909|gb|AFZ81668.1| proteasome subunit alpha type, putative [Babesia equi]
Length = 255
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +G+L G++L A+K ++KLLD G +EK+YKL
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASLTIGVLCDHGVVLVADKPVSSKLLDPGKINEKLYKL 68
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA+EAI++A +G+L G++L A+K ++
Sbjct: 17 RLYQVEYALEAINNASLTIGVLCDHGVVLVADKPVS 52
>gi|403223593|dbj|BAM41723.1| proteasome component [Theileria orientalis strain Shintoku]
Length = 457
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +G+L G++L A+K ++KLLD G +EK+YKL
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASLTVGVLCNSGVVLVADKPISSKLLDPGKINEKLYKL 68
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA+EAI++A +G+L G++L A+K ++
Sbjct: 17 RLYQVEYALEAINNASLTVGVLCNSGVVLVADKPIS 52
>gi|83286581|ref|XP_730225.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii 17XNL]
gi|23489885|gb|EAA21790.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii]
Length = 246
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYA+EAI++A +GI+ DG++L A+K +KL+++ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGIITNDGVILGADKVFISKLINKANNFEKIYKID 69
Query: 102 DSL 104
D +
Sbjct: 70 DHI 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GI+ DG++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGIITNDGVILGADK 49
>gi|308159674|gb|EFO62196.1| 20S proteasome alpha subunit 3 [Giardia lamblia P15]
Length = 244
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 36 RLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
R + + RL QVEYA++A++ A CL ILAQDGI+ A+K+ +KL D+ TSE
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQ-QTSE 61
Query: 96 KIYKL 100
KIYK+
Sbjct: 62 KIYKI 66
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL QVEYA++A++ A CL ILAQDGI+ A+K+L S ++Y+++ SH
Sbjct: 16 RLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTSEKIYKID------SH 69
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ L D +L E R
Sbjct: 70 IVCAVSGLTSDANILIDEAR 89
>gi|159119197|ref|XP_001709817.1| 20S proteasome alpha subunit 3 [Giardia lamblia ATCC 50803]
gi|7576250|emb|CAB87991.1| 20S proteasome alpha-subunit 3 (C9) [Giardia intestinalis]
gi|157437934|gb|EDO82143.1| 20S proteasome alpha subunit 3 [Giardia lamblia ATCC 50803]
Length = 244
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 36 RLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
R + + RL QVEYA++A++ A CL ILAQDGI+ A+K+ +KL D+ TSE
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQ-QTSE 61
Query: 96 KIYKL 100
KIYK+
Sbjct: 62 KIYKI 66
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL QVEYA++A++ A CL ILAQDGI+ A+K+L S ++Y+++ SH
Sbjct: 16 RLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTSEKIYKID------SH 69
Query: 63 AGTCLGILAQDGILLAAEKRN 83
+ L D +L E R
Sbjct: 70 IVCAVSGLTSDANILIDEART 90
>gi|325183433|emb|CCA17894.1| proteasome subunit alpha putative [Albugo laibachii Nc14]
Length = 250
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI++AG+ +GILA+ GI++AAEK+ +KLL S K +L
Sbjct: 11 TFSPE-GRLFQVEYAIEAINNAGSAVGILAKTGIIIAAEKKVASKLLAPAKNSGKTLRLD 69
Query: 102 D 102
D
Sbjct: 70 D 70
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 33/35 (94%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI++AG+ +GILA+ GI++AAEK++
Sbjct: 17 RLFQVEYAIEAINNAGSAVGILAKTGIIIAAEKKV 51
>gi|124513788|ref|XP_001350250.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23615667|emb|CAD52659.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 246
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +G++ +DG++L A+K +KL+D+ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGLITKDGVILGADKVFISKLIDKANNYEKIYKI 68
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +G++ +DG++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGLITKDGVILGADK 49
>gi|253744109|gb|EET00362.1| 20S proteasome alpha subunit 3 [Giardia intestinalis ATCC 50581]
Length = 244
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 36 RLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
R + + RL QVEYA++A++ A CL ILAQDGI+ A+K+ +KL D+ TSE
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQ-QTSE 61
Query: 96 KIYKL 100
KIY++
Sbjct: 62 KIYRI 66
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL QVEYA++A++ A CL ILAQDGI+ A+K+L S ++Y+++ SH
Sbjct: 16 RLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTSEKIYRID------SH 69
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ L D +L E R
Sbjct: 70 IVCAVSGLTSDANILIDEAR 89
>gi|156101261|ref|XP_001616324.1| 20S proteasome alpha subunit C [Plasmodium vivax Sal-1]
gi|148805198|gb|EDL46597.1| 20S proteasome alpha subunit C, putative [Plasmodium vivax]
Length = 246
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +GI+ +G++L A+K +KL+D+ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGIITNEGVILGADKVFISKLIDKANNFEKIYKI 68
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GI+ +G++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGIITNEGVILGADK 49
>gi|145506186|ref|XP_001439059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406232|emb|CAK71662.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +Q + RL QVEYA+EAI+ G+ LG+L DG++LA EK+ + LL+ S
Sbjct: 3 RRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGVLTNDGMILATEKQEVSHLLEHSKHS 62
Query: 95 EKIYKL 100
EKIY +
Sbjct: 63 EKIYPI 68
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL----PHMSRLYQVE 54
RL QVEYA+EAI+ G+ LG+L DG++LA EK Q+ S L H ++Y ++
Sbjct: 17 RLKQVEYAIEAINQTGSALGVLTNDGMILATEK---QEVSHLLEHSKHSEKIYPID 69
>gi|389584511|dbj|GAB67243.1| 20S proteasome alpha subunit C [Plasmodium cynomolgi strain B]
Length = 246
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +GI+ +G++L A+K +KL+D+ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGIITNEGVILGADKVFISKLIDKANNFEKIYKI 68
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GI+ +G++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGIITNEGVILGADK 49
>gi|221057694|ref|XP_002261355.1| proteasome subunit [Plasmodium knowlesi strain H]
gi|194247360|emb|CAQ40760.1| proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 246
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RLYQVEYA+EAI++A +GI+ +G++L A+K +KL+D+ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGIITSEGVILGADKVFISKLIDKANNFEKIYKI 68
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GI+ +G++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGIITSEGVILGADK 49
>gi|52550475|gb|AAU84324.1| proteasome alpha subunit [uncultured archaeon GZfos9D1]
Length = 261
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG++L +KR T++LL EG + EKI+K+ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLL-EGGSVEKIFKIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T +GI AQDG++L +KRL + ++++++
Sbjct: 20 GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGGSVEKIFKID------E 73
Query: 62 HAGTCLGILAQDGILLAAEKR 82
H G L D +L R
Sbjct: 74 HIGAATSGLVADARVLVDRGR 94
>gi|52352382|gb|AAU43671.1| proteasome alpha subunit [uncultured archaeon GZfos26D8]
Length = 263
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG++L +KR T++LL EG + EKI+K+ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLL-EGGSVEKIFKIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T +GI AQDG++L +KRL + ++++++
Sbjct: 20 GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGGSVEKIFKID------E 73
Query: 62 HAGTCLGILAQDGILLAAEKR 82
H G L D +L R
Sbjct: 74 HIGAATSGLVADARILVDRGR 94
>gi|52548820|gb|AAU82669.1| proteasome alpha subunit [uncultured archaeon GZfos19A5]
Length = 263
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG++L +KR T++LL EG + EKI+K+ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLL-EGGSVEKIFKIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T +GI AQDG++L +KRL + ++++++
Sbjct: 20 GRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGGSVEKIFKID------E 73
Query: 62 HAGTCLGILAQDGILLAAEKR 82
H G L D +L R
Sbjct: 74 HIGAATSGLVADARVLVDRGR 94
>gi|9623020|gb|AAF90007.1| 20S proteasome alpha 3 subunit [Acanthamoeba castellanii]
Length = 104
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAISHAG +GIL +DG++LA EK+ +KLL+ G SEK+Y++ D +
Sbjct: 1 MEAISHAGAAVGILGKDGVVLACEKKIASKLLEPGKRSEKMYRIDDHI 48
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 11 MEAISHAGTCLGILAQDGILLAAEKRL 37
MEAISHAG +GIL +DG++LA EK++
Sbjct: 1 MEAISHAGAAVGILGKDGVVLACEKKI 27
>gi|68066270|ref|XP_675116.1| proteasome subunit [Plasmodium berghei strain ANKA]
gi|56494107|emb|CAI00054.1| proteasome subunit, putative [Plasmodium berghei]
Length = 246
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYA+EAI++A +GI+ G++L A+K +KL+++ EKIYK+
Sbjct: 11 TFSPE-GRLYQVEYALEAINNASITIGIITNGGVILGADKVFISKLINKANNFEKIYKID 69
Query: 102 DSL 104
D +
Sbjct: 70 DHI 72
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI++A +GI+ G++L A+K
Sbjct: 17 RLYQVEYALEAINNASITIGIITNGGVILGADK 49
>gi|443923517|gb|ELU42746.1| transcription factor [Rhizoctonia solani AG-1 IA]
Length = 877
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 8/64 (12%)
Query: 52 QVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE--------GTTSEKIYKLHDS 103
+ EYAMEAI+HAGT +G+ +++G++LAAEK+ T KLLD G + EKI+ L+ +
Sbjct: 87 EAEYAMEAIAHAGTVIGVQSKEGVVLAAEKKVTGKLLDTSVVKEGGYGGSGEKIFLLNKN 146
Query: 104 LNII 107
N+I
Sbjct: 147 SNLI 150
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 29/32 (90%)
Query: 6 QVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
+ EYAMEAI+HAGT +G+ +++G++LAAEK++
Sbjct: 87 EAEYAMEAIAHAGTVIGVQSKEGVVLAAEKKV 118
>gi|156089275|ref|XP_001612044.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|83616175|gb|ABC25612.1| putative proteasome subunit [Babesia bovis]
gi|154799298|gb|EDO08476.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 257
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R + + RLYQVEYA+EAI++A +G+L G++LAA+K + LLD G +
Sbjct: 3 RRYDTKTTTFSQEGRLYQVEYALEAINNANLTVGLLCDLGVVLAADKPISTPLLDPGKIN 62
Query: 95 EKIYKL 100
EK+YKL
Sbjct: 63 EKLYKL 68
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 29/36 (80%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA+EAI++A +G+L G++LAA+K ++
Sbjct: 17 RLYQVEYALEAINNANLTVGLLCDLGVVLAADKPIS 52
>gi|401417818|ref|XP_003873401.1| putative proteasome alpha 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489631|emb|CBZ24889.1| putative proteasome alpha 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA+EAI AGT +G+ +DG++LA EK + L D+ T+ E
Sbjct: 11 TFSPE-GRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDNENMQDKNTSGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI AGT +G+ +DG++LA EK
Sbjct: 17 RLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEK 49
>gi|398012419|ref|XP_003859403.1| proteasome alpha 3 subunit, putative [Leishmania donovani]
gi|322497618|emb|CBZ32691.1| proteasome alpha 3 subunit, putative [Leishmania donovani]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA+EAI AGT +G+ +DG++LA EK + L D+ T+ E
Sbjct: 11 TFSPE-GRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNTSGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI AGT +G+ +DG++LA EK
Sbjct: 17 RLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEK 49
>gi|146081283|ref|XP_001464214.1| putative proteasome alpha 3 subunit [Leishmania infantum JPCM5]
gi|134068305|emb|CAM66591.1| putative proteasome alpha 3 subunit [Leishmania infantum JPCM5]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA+EAI AGT +G+ +DG++LA EK + L D+ T+ E
Sbjct: 11 TFSPE-GRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNTSGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI AGT +G+ +DG++LA EK
Sbjct: 17 RLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEK 49
>gi|52549531|gb|AAU83380.1| hypothetical protein GZ27G5_10 [uncultured archaeon GZfos27G5]
Length = 261
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDGI+L +KR T++LL EG + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAIGIKAQDGIVLLVDKRLTSRLL-EGGSVEKIFQIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T +GI AQDGI+L +KRL + +++Q++
Sbjct: 20 GRLFQVEYAREAVKRGTTAIGIKAQDGIVLLVDKRLTSRLLEGGSVEKIFQID------E 73
Query: 62 HAGTCLGILAQDGILLAAEKR 82
H G L D +L R
Sbjct: 74 HIGAATSGLVADARVLVDRGR 94
>gi|397634206|gb|EJK71337.1| hypothetical protein THAOC_07240, partial [Thalassiosira
oceanica]
Length = 60
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+EAI++AGT +GILA+DG+++A+EK+ T+ LL
Sbjct: 11 TFSPE-GRLHQVEYAIEAINNAGTSVGILAKDGVVMASEKKVTSGLL 56
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 34/35 (97%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI++AGT +GILA+DG+++A+EK++
Sbjct: 17 RLHQVEYAIEAINNAGTSVGILAKDGVVMASEKKV 51
>gi|52550031|gb|AAU83880.1| proteasome alpha subunit [uncultured archaeon GZfos34H10]
Length = 245
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L +
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRLDE 71
Query: 103 SLNIIT 108
+ T
Sbjct: 72 HIGAAT 77
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA EA+ T +GI AQDG+ L +KRL
Sbjct: 18 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT 54
>gi|145546414|ref|XP_001458890.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426712|emb|CAK91493.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +Q + RL QVEYA+EAI+ G+ LGIL +G++LA EK+ + LL+ S
Sbjct: 3 RRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGILTNEGMILATEKQEVSHLLEHSKHS 62
Query: 95 EKIYKL 100
EKIY +
Sbjct: 63 EKIYPI 68
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL----PHMSRLYQVE 54
RL QVEYA+EAI+ G+ LGIL +G++LA EK Q+ S L H ++Y ++
Sbjct: 17 RLKQVEYAIEAINQTGSALGILTNEGMILATEK---QEVSHLLEHSKHSEKIYPID 69
>gi|356521064|ref|XP_003529178.1| PREDICTED: proteasome subunit alpha type-4-like isoform 3 [Glycine
max]
Length = 226
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
MEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 1 MEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 46
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 11 MEAISHAGTCLGILAQDGILLAAEKRL 37
MEAI +AGT +GIL++DG++L EK++
Sbjct: 1 MEAIGNAGTAIGILSKDGVVLVGEKKV 27
>gi|356568148|ref|XP_003552275.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 226
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
MEAI +AGT +GIL++DG++L EK+ T+KLL T++EK+YK+ D
Sbjct: 1 MEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDD 46
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 11 MEAISHAGTCLGILAQDGILLAAEKRL 37
MEAI +AGT +GIL++DG++L EK++
Sbjct: 1 MEAIGNAGTAIGILSKDGVVLVGEKKV 27
>gi|110667477|ref|YP_657288.1| proteasome subunit alpha [Haloquadratum walsbyi DSM 16790]
gi|385802916|ref|YP_005839316.1| proteasome subunit alpha [Haloquadratum walsbyi C23]
gi|121689860|sp|Q18K08.1|PSA_HALWD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|109625224|emb|CAJ51644.1| proteasome alpha subunit [Haloquadratum walsbyi DSM 16790]
gi|339728408|emb|CCC39557.1| proteasome alpha subunit [Haloquadratum walsbyi C23]
Length = 250
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DGI+LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLM-EPTSVEKIHKTDD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HVGI 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI DGI+LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRTPDGIVLAADKR 55
>gi|432330570|ref|YP_007248713.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanoregula formicicum SMSP]
gi|432137279|gb|AGB02206.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanoregula formicicum SMSP]
Length = 240
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI A+DG++L +KR ++KLL E ++ EKI+K+ +
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKAKDGVVLIVDKRVSSKLL-EASSIEKIFKIDE 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI A+DG++L +KR++ + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKAKDGVVLIVDKRVSSKLLEASSIEKIFKID 72
>gi|145515613|ref|XP_001443706.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411095|emb|CAK76309.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +Q + RL QVEYA+EAI+ G+ LG+L +G++LA EK+ + LL+ S
Sbjct: 3 RRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGVLTNEGMILATEKQEVSHLLEHSKHS 62
Query: 95 EKIYKL 100
EKIY +
Sbjct: 63 EKIYPI 68
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL----PHMSRLYQVE 54
RL QVEYA+EAI+ G+ LG+L +G++LA EK Q+ S L H ++Y ++
Sbjct: 17 RLKQVEYAIEAINQTGSALGVLTNEGMILATEK---QEVSHLLEHSKHSEKIYPID 69
>gi|448414403|ref|ZP_21577472.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
gi|445681969|gb|ELZ34393.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
Length = 250
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LGI DG++LAA++R ++ L+ E + EKI+KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPSLGIRTADGVVLAAQRRTSSSLM-EADSIEKIHKLDD 73
Query: 103 SLNIIT 108
L T
Sbjct: 74 YLGAAT 79
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
R+YQVEYA EA+ LGI DG++LAA++R +
Sbjct: 21 RIYQVEYAREAVKRGAPSLGIRTADGVVLAAQRRTS 56
>gi|118354007|ref|XP_001010268.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89292035|gb|EAR90023.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +Q + + +L QV+YA+EAI+ G+ +GIL ++GI+L E+++ + LL+ T S
Sbjct: 3 RRYDQKTTTFTNDGKLLQVQYAIEAINKTGSAIGILTKEGIVLTTERQDVSSLLEAPTHS 62
Query: 95 EKIYKLHDSL 104
EKI++L L
Sbjct: 63 EKIFQLDSHL 72
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL----PHMSRLYQVE 54
+L QV+YA+EAI+ G+ +GIL ++GI+L E+ QD S L H +++Q++
Sbjct: 17 KLLQVQYAIEAINKTGSAIGILTKEGIVLTTER---QDVSSLLEAPTHSEKIFQLD 69
>gi|328856907|gb|EGG06026.1| hypothetical protein MELLADRAFT_72017 [Melampsora larici-populina
98AG31]
Length = 295
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 15/106 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL---NQDFSFLPHMSRLYQVEYAMEA 59
RLYQVEYAMEAI+HAGT +GILA + E + ++D + M+ + Q + ++
Sbjct: 17 RLYQVEYAMEAINHAGTVIGILASCSPPSSEETKTGSGSEDVA----MTDVTQTK--EDS 70
Query: 60 ISHAGTCLGILAQDGILLAAEKRNTNKLLD-EGTTSEKIYKLHDSL 104
S G + G++LAAEK+ T+KLL+ E +SEKI+ ++++L
Sbjct: 71 SSKKGK-----RRTGVVLAAEKKVTSKLLEKEQGSSEKIFLINNNL 111
>gi|195341688|ref|XP_002037438.1| GM12106 [Drosophila sechellia]
gi|194131554|gb|EDW53597.1| GM12106 [Drosophila sechellia]
Length = 257
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ--DFSF-LPHMSRL 50
RLYQVEYAMEA S +GTC+GILA++G+LLA E+ +++ D S +P +S L
Sbjct: 17 RLYQVEYAMEAASQSGTCVGILAKNGVLLATERSVDKLMDTSIPVPRISTL 67
>gi|154151363|ref|YP_001404981.1| proteasome subunit alpha [Methanoregula boonei 6A8]
gi|166199284|sp|A7I9C7.1|PSA_METB6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|153999915|gb|ABS56338.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 240
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI A DG++L +KR ++KLL E ++ EKI+K+ +
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLL-ESSSIEKIFKIDE 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI A DG++L +KR++ + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKID 72
>gi|195175579|ref|XP_002028517.1| GL22394 [Drosophila persimilis]
gi|194104341|gb|EDW26384.1| GL22394 [Drosophila persimilis]
Length = 246
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P RLYQVEYAMEA+ + CLGI+A DG+LLAAE+ N+ + G S K+++L
Sbjct: 12 FSPE-GRLYQVEYAMEAVCASNLCLGIVAADGVLLAAERCNSRLV---GGPSGKMFRL 65
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYAMEA+ + CLGI+A DG+LLAAE+
Sbjct: 17 RLYQVEYAMEAVCASNLCLGIVAADGVLLAAER 49
>gi|52549118|gb|AAU82967.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos24D9]
Length = 245
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRL 69
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAME 58
RL+QVEYA EA+ T +GI AQDG+ L +KRL SRL + VE
Sbjct: 18 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT---------SRLLEGGSVEKIFR 68
Query: 59 AISHAGTCLGILAQDGILLAAEKR---NTNKLL-DEGTTSEKIYK 99
+H G L D +L R NK++ DE E + K
Sbjct: 69 LDTHIGAATSGLVADARMLIDRGRVESQINKVVYDEPIAVETLAK 113
>gi|198472237|ref|XP_002132983.1| GA28930 [Drosophila pseudoobscura pseudoobscura]
gi|198138923|gb|EDY70385.1| GA28930 [Drosophila pseudoobscura pseudoobscura]
Length = 246
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P RLYQVEYAMEA+ + CLGI+A DG+LLAAE+ N+ + G S K+++L
Sbjct: 12 FSPE-GRLYQVEYAMEAVCASNLCLGIVAADGVLLAAERCNSRLV---GGPSGKMFRL 65
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYAMEA+ + CLGI+A DG+LLAAE+
Sbjct: 17 RLYQVEYAMEAVCASNLCLGIVAADGVLLAAER 49
>gi|71411717|ref|XP_808096.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70872228|gb|EAN86245.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AEK N L D+ + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSENMEDKNISGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KLYKI 74
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AEK
Sbjct: 17 RLYQVEYAEEAISQAGTVIGILTTGGVVLGAEK 49
>gi|399218632|emb|CCF75519.1| unnamed protein product [Babesia microti strain RI]
Length = 259
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R+YQVEYA+EAI++A +GIL+++G++L A+K ++ LL + + EK+YK+
Sbjct: 10 TFSPE-GRMYQVEYALEAINNASLTIGILSKEGVVLVADKPVSSTLLGDSYSLEKLYKID 68
Query: 102 DSL 104
D +
Sbjct: 69 DHI 71
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 31/36 (86%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
R+YQVEYA+EAI++A +GIL+++G++L A+K ++
Sbjct: 16 RMYQVEYALEAINNASLTIGILSKEGVVLVADKPVS 51
>gi|448727989|ref|ZP_21710329.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
gi|445788655|gb|EMA39361.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
Length = 233
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T LG+ DG++L AE+R + L+ EG++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSTSLGVRTADGVVLVAEQRVRSPLM-EGSSIEKLHKVDD 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HIAV 78
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ T LG+ DG++L AE+R+ + +L++V+ + A+
Sbjct: 22 RLYQVEYAREAVERGSTSLGVRTADGVVLVAEQRVRSPLMEGSSIEKLHKVDDHI-AVGS 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|52548649|gb|AAU82498.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos18B6]
Length = 245
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRLDT 71
Query: 103 SLNIIT 108
+ T
Sbjct: 72 HIGAAT 77
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAME 58
RL+QVEYA EA+ T +GI AQDG+ L +KRL SRL + VE
Sbjct: 18 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT---------SRLLEGGSVEKIFR 68
Query: 59 AISHAGTCLGILAQDGILLAAEKR---NTNKLL-DEGTTSEKIYK 99
+H G L D +L R NK++ DE E + K
Sbjct: 69 LDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPIAVETLAK 113
>gi|40217443|emb|CAE46376.1| proteasome, alpha subunit [uncultured archaeon]
gi|268323826|emb|CBH37414.1| proteasome alpha subunit [uncultured archaeon]
Length = 245
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRLDT 71
Query: 103 SLNIIT 108
+ T
Sbjct: 72 HIGAAT 77
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAME 58
RL+QVEYA EA+ T +GI AQDG+ L +KRL SRL + VE
Sbjct: 18 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT---------SRLLEGGSVEKIFR 68
Query: 59 AISHAGTCLGILAQDGILLAAEKR---NTNKLL-DEGTTSEKIYK 99
+H G L D +L R NK++ DE E + K
Sbjct: 69 LDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPIAVETLAK 113
>gi|407833386|gb|EKF98756.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AEK N L D+ + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSENMEDKNISGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AEK
Sbjct: 17 RLYQVEYAEEAISQAGTVIGILTTGGVVLGAEK 49
>gi|52548384|gb|AAU82233.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos11H11]
Length = 241
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L
Sbjct: 10 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRLDT 67
Query: 103 SLNIIT 108
+ T
Sbjct: 68 HIGAAT 73
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAME 58
RL+QVEYA EA+ T +GI AQDG+ L +KRL SRL + VE
Sbjct: 14 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT---------SRLLEGGSVEKIFR 64
Query: 59 AISHAGTCLGILAQDGILLAAEKR---NTNKLL-DEGTTSEKIYK 99
+H G L D +L R NK++ DE E + K
Sbjct: 65 LDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPIAVETLAK 109
>gi|407399893|gb|EKF28469.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 286
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AEK N L D+ + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSENMEDKNISGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AEK
Sbjct: 17 RLYQVEYAEEAISQAGTVIGILTTGGVVLGAEK 49
>gi|45357814|ref|NP_987371.1| proteasome subunit alpha [Methanococcus maripaludis S2]
gi|340623432|ref|YP_004741885.1| proteasome subunit alpha [Methanococcus maripaludis X1]
gi|59798297|sp|Q6M0L9.1|PSA_METMP RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|45047374|emb|CAF29807.1| proteasome, subunit alpha [Methanococcus maripaludis S2]
gi|339903700|gb|AEK19142.1| proteasome subunit alpha [Methanococcus maripaludis X1]
Length = 259
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+D + EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI-EKIFQIDD 74
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQID 73
>gi|134046449|ref|YP_001097934.1| proteasome subunit alpha [Methanococcus maripaludis C5]
gi|166199285|sp|A4FZT6.1|PSA_METM5 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|132664074|gb|ABO35720.1| proteasome subunit alpha 4 [Methanococcus maripaludis C5]
Length = 259
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+D + EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI-EKIFQIDD 74
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQID 73
>gi|52549700|gb|AAU83549.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos30H9]
Length = 241
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P RL+QVEYA EA+ T +GI AQDG+ L +KR T++LL EG + EKI++L
Sbjct: 10 FSPD-GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLL-EGGSVEKIFRL 65
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA EA+ T +GI AQDG+ L +KRL
Sbjct: 14 GRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLT 50
>gi|340054812|emb|CCC49116.1| putative proteasome alpha 3 subunit [Trypanosoma vivax Y486]
Length = 285
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AE+ N L D + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTVVGILTSGGVVLGAERGQQNCLFDTENMEDRNVSGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KVYKI 74
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AE+
Sbjct: 17 RLYQVEYAEEAISQAGTVVGILTSGGVVLGAER 49
>gi|150403173|ref|YP_001330467.1| proteasome subunit alpha [Methanococcus maripaludis C7]
gi|166199286|sp|A6VIP0.1|PSA_METM7 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|150034203|gb|ABR66316.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
Length = 259
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+D ++ EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDV-SSIEKIFQIDD 74
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQID 73
>gi|150400006|ref|YP_001323773.1| proteasome subunit alpha [Methanococcus vannielii SB]
gi|166199289|sp|A6URN9.1|PSA_METVS RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|150012709|gb|ABR55161.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 259
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+D ++ EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLID-VSSIEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQID 73
>gi|72391542|ref|XP_846065.1| proteasome alpha 3 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175679|gb|AAX69811.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei]
gi|70802601|gb|AAZ12506.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261329602|emb|CBH12584.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 286
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR------NTNKLLDEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AE+ +T + D + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTENMEDRNISGE 69
Query: 96 KIYKLHDSL 104
K+YK+ + L
Sbjct: 70 KVYKISNHL 78
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AE+
Sbjct: 17 RLYQVEYAEEAISQAGTIIGILTTGGVVLGAER 49
>gi|297619735|ref|YP_003707840.1| proteasome endopeptidase complex subunit alpha [Methanococcus
voltae A3]
gi|297378712|gb|ADI36867.1| proteasome endopeptidase complex, alpha subunit [Methanococcus
voltae A3]
Length = 254
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R +NKL+ E ++ EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRISNKLV-EVSSIEKIFQVDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R++ + + +++QV+
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRISNKLVEVSSIEKIFQVD 73
>gi|71651059|ref|XP_814215.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70879168|gb|EAN92364.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AEK N L D + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSENMEDNNISGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AEK
Sbjct: 17 RLYQVEYAEEAISQAGTVIGILTTGGVVLGAEK 49
>gi|448382199|ref|ZP_21561955.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
gi|445662032|gb|ELZ14806.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
Length = 254
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ QDG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ QDG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRV 56
>gi|157866477|ref|XP_001687630.1| putative proteasome alpha 3 subunit [Leishmania major strain
Friedlin]
gi|68125244|emb|CAJ02729.1| putative proteasome alpha 3 subunit [Leishmania major strain
Friedlin]
Length = 285
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA+EAI AGT +G+ +DG++LA EK + L D+ + E
Sbjct: 11 TFSPE-GRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNISGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI AGT +G+ +DG++LA EK
Sbjct: 17 RLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEK 49
>gi|159905089|ref|YP_001548751.1| proteasome subunit alpha [Methanococcus maripaludis C6]
gi|229598015|sp|A9A846.1|PSA_METM6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|159886582|gb|ABX01519.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 259
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI DG++LA ++R T+KL+D + EKI+++ D
Sbjct: 17 FSPE-GRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSI-EKIFQIDD 74
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI DG++LA ++R+ + + +++Q++
Sbjct: 22 RLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQID 73
>gi|296109873|ref|YP_003616822.1| proteasome endopeptidase complex, alpha subunit [methanocaldococcus
infernus ME]
gi|295434687|gb|ADG13858.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
infernus ME]
Length = 247
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI+ +DG++LA ++R T+KL+ + + EKIY++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVKRGTTAVGIVCKDGVILAVDRRVTSKLI-KIRSIEKIYQIDD 73
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI+ +DG++LA ++R+ + + ++YQ++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIVCKDGVILAVDRRVTSKLIKIRSIEKIYQID 72
>gi|340501332|gb|EGR28129.1| proteasome subunit, putative [Ichthyophthirius multifiliis]
Length = 252
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTS 94
+R +Q + +L QV+YA+EAI+ G+ +GIL ++GI LA EK + + LL+ TS
Sbjct: 3 RRYDQKTTTFNKEGKLLQVQYAIEAINKTGSAIGILTKEGIALATEKLDVSFLLEASKTS 62
Query: 95 EKIYKLHDSL 104
EKI+ + + L
Sbjct: 63 EKIFAVDNHL 72
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAME 58
+L QV+YA+EAI+ G+ +GIL ++GI LA EK D SFL S+ + +A++
Sbjct: 17 KLLQVQYAIEAINKTGSAIGILTKEGIALATEKL---DVSFLLEASKTSEKIFAVD 69
>gi|242399329|ref|YP_002994753.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
gi|259535090|sp|C6A459.1|PSA_THESM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|242265722|gb|ACS90404.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
Length = 260
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV+YA EA+ T +G+ +DG++LA EKR T+KL+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLI-EPESYEKIFQIDD 74
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV+YA EA+ T +G+ +DG++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|375082090|ref|ZP_09729160.1| proteasome subunit alpha [Thermococcus litoralis DSM 5473]
gi|374743303|gb|EHR79671.1| proteasome subunit alpha [Thermococcus litoralis DSM 5473]
Length = 260
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV+YA EA+ T +G+ +DG++LA EKR T+KL+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLI-EPESYEKIFQIDD 74
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV+YA EA+ T +G+ +DG++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|336254519|ref|YP_004597626.1| proteasome endopeptidase complex subunit alpha [Halopiger
xanaduensis SH-6]
gi|335338508|gb|AEH37747.1| proteasome endopeptidase complex, alpha subunit [Halopiger
xanaduensis SH-6]
Length = 254
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ QDG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ QDG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRV 56
>gi|302348939|ref|YP_003816577.1| proteasome subunit alpha [Acidilobus saccharovorans 345-15]
gi|302329351|gb|ADL19546.1| Proteasome subunit alpha [Acidilobus saccharovorans 345-15]
Length = 257
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P LYQV YA EA+ T LG+L G++LAAEKR LLD EKIYK+ D
Sbjct: 17 FSPD-GELYQVRYAFEAVRKGWTSLGVLTDSGVILAAEKRKITPLLDLNGI-EKIYKVDD 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HIGV 78
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV YA EA+ T LG+L G++LAAEKR L + ++Y+V+ H
Sbjct: 23 LYQVRYAFEAVRKGWTSLGVLTDSGVILAAEKRKITPLLDLNGIEKIYKVD------DHI 76
Query: 64 GTCLGILAQDGILL 77
G + DG +L
Sbjct: 77 GVTFAGMGSDGRVL 90
>gi|327400935|ref|YP_004341774.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
gi|327316443|gb|AEA47059.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
Length = 247
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI ++G+LL A++R +KLL E TT EKIYK+ +
Sbjct: 15 FSPD-GRLFQVEYAREAVKRGATAIGIKTKEGVLLLADRRVASKLL-EITTIEKIYKIDE 72
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI ++G+LL A++R+ + + ++Y+++
Sbjct: 20 RLFQVEYAREAVKRGATAIGIKTKEGVLLLADRRVASKLLEITTIEKIYKID 71
>gi|448714782|ref|ZP_21702213.1| proteasome subunit alpha [Halobiforma nitratireducens JCM 10879]
gi|445788427|gb|EMA39141.1| proteasome subunit alpha [Halobiforma nitratireducens JCM 10879]
Length = 251
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ QDG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ QDG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRV 56
>gi|399575139|ref|ZP_10768897.1| proteasome subunit alpha [Halogranum salarium B-1]
gi|399239407|gb|EJN60333.1| proteasome subunit alpha [Halogranum salarium B-1]
Length = 253
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++LAA+KR+ + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTADGVVLAADKRSGSPLM-EPSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGIRTADGVVLAADKR 55
>gi|403160142|ref|XP_003320696.2| 20S proteasome subunit alpha 3 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169429|gb|EFP76277.2| 20S proteasome subunit alpha 3 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 349
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 16/111 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE-YAMEAIS 61
RLYQVEYAMEAI+HAGT +GILA AA +D P + E AM S
Sbjct: 63 RLYQVEYAMEAINHAGTVIGILASGA---AAPAPTGED----PKTTTTTGSEDVAMSDAS 115
Query: 62 HAGT----CLGILA---QDGILLAAEKRNTNKLLD-EGTTSEKIYKLHDSL 104
A T + I + GI+LAAEK+ T+KLL+ E T EKI+ ++ +L
Sbjct: 116 PAATKPVEPVAIKKGKRRTGIVLAAEKKVTSKLLEKEEGTGEKIFLINGNL 166
>gi|333986692|ref|YP_004519299.1| proteasome endopeptidase complex subunit alpha [Methanobacterium
sp. SWAN-1]
gi|333824836|gb|AEG17498.1| proteasome endopeptidase complex, alpha subunit [Methanobacterium
sp. SWAN-1]
Length = 249
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ + +GI+LA +KR T+KL+ E + EKI+++ D
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSLGVKSTEGIVLAVDKRPTSKLV-EPKSIEKIFQIDD 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T LG+ + +GI+LA +KR + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSTEGIVLAVDKRPTSKLVEPKSIEKIFQID 72
>gi|242214840|ref|XP_002473240.1| predicted protein [Postia placenta Mad-698-R]
gi|220727673|gb|EED81585.1| predicted protein [Postia placenta Mad-698-R]
Length = 239
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLD--------EGTTSEKIYKLHDSLNIIT 108
MEAISHAG+ LG+LA+DG++LAAEK+ T KLLD G + EKI+ L+ N+I+
Sbjct: 1 MEAISHAGSVLGVLAKDGVVLAAEKKVTGKLLDLSGAREGGYGGSGEKIFLLNS--NVIS 58
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 26/27 (96%)
Query: 11 MEAISHAGTCLGILAQDGILLAAEKRL 37
MEAISHAG+ LG+LA+DG++LAAEK++
Sbjct: 1 MEAISHAGSVLGVLAKDGVVLAAEKKV 27
>gi|448473365|ref|ZP_21601507.1| proteasome subunit alpha [Halorubrum aidingense JCM 13560]
gi|445818877|gb|EMA68726.1| proteasome subunit alpha [Halorubrum aidingense JCM 13560]
Length = 268
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR ++L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSRLM-EPASIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|448524671|ref|ZP_21619434.1| proteasome subunit alpha, partial [Halorubrum distributum JCM
10118]
gi|445700282|gb|ELZ52289.1| proteasome subunit alpha, partial [Halorubrum distributum JCM
10118]
Length = 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|154334143|ref|XP_001563323.1| putative proteasome alpha 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060339|emb|CAM37500.1| putative proteasome alpha 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 285
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL------DEGTTSE 95
+F P RLYQVEYA+EAI AGT +G+ + G++LA EK + L D+ T+ E
Sbjct: 11 TFSPE-GRLYQVEYAVEAIQQAGTVIGVCTKGGVVLAGEKMVPHPLFDSENMQDKNTSGE 69
Query: 96 KIYKL 100
K+YK+
Sbjct: 70 KMYKI 74
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA+EAI AGT +G+ + G++LA EK
Sbjct: 17 RLYQVEYAVEAIQQAGTVIGVCTKGGVVLAGEK 49
>gi|300123907|emb|CBK25178.2| unnamed protein product [Blastocystis hominis]
gi|300174996|emb|CBK20307.2| unnamed protein product [Blastocystis hominis]
Length = 217
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RLYQVEYAMEAI++A +GIL ++GI EK+ +KLL + SEK+Y +
Sbjct: 11 TFSPE-GRLYQVEYAMEAINNAPCAIGILTKEGIAFGIEKKIISKLLAKIGESEKVYAID 69
Query: 102 DSL 104
+ +
Sbjct: 70 NHI 72
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYAMEAI++A +GIL ++GI EK++
Sbjct: 17 RLYQVEYAMEAINNAPCAIGILTKEGIAFGIEKKI 51
>gi|448541426|ref|ZP_21624201.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|448549754|ref|ZP_21628359.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
gi|448555135|ref|ZP_21631175.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
gi|445708026|gb|ELZ59870.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|445712802|gb|ELZ64583.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
gi|445717880|gb|ELZ69583.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
Length = 253
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|448625033|ref|ZP_21670800.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
gi|445748795|gb|EMA00241.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|433434337|ref|ZP_20407995.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|448571755|ref|ZP_21639929.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
gi|448596663|ref|ZP_21653801.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
gi|432192764|gb|ELK49590.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|445721722|gb|ELZ73388.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
gi|445740544|gb|ELZ92049.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
Length = 253
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|284161625|ref|YP_003400248.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|284011622|gb|ADB57575.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 246
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +G+ ++G++L A++R T++LL E T EKIY + D
Sbjct: 15 FSPD-GRLFQVEYAREAVKRGATVIGVKTKEGVILVADRRVTSRLL-EPDTIEKIYIIDD 72
Query: 103 SLNIIT 108
+ T
Sbjct: 73 HIGAAT 78
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T +G+ ++G++L A++R+ + ++Y ++ H
Sbjct: 20 RLFQVEYAREAVKRGATVIGVKTKEGVILVADRRVTSRLLEPDTIEKIYIID------DH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D +L R
Sbjct: 74 IGAATSGLVADARILIDRAR 93
>gi|429216663|ref|YP_007174653.1| proteasome endopeptidase complex subunit alpha [Caldisphaera
lagunensis DSM 15908]
gi|429133192|gb|AFZ70204.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Caldisphaera lagunensis DSM 15908]
Length = 254
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD-EGTTSEKIYKLH 101
F P LYQV YA EA+ T LGI+ G++LAAEKR LLD EG EKIYK+
Sbjct: 15 FSPD-GELYQVRYAFEAVKKGWTSLGIITDQGVILAAEKRRMLPLLDLEGI--EKIYKVD 71
Query: 102 DSLNI 106
D + +
Sbjct: 72 DHIGV 76
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV YA EA+ T LGI+ G++LAAEKR L + ++Y+V+ H
Sbjct: 21 LYQVRYAFEAVKKGWTSLGIITDQGVILAAEKRRMLPLLDLEGIEKIYKVD------DHI 74
Query: 64 GTCLGILAQDGILL 77
G + DG +L
Sbjct: 75 GVTFAGMGSDGRVL 88
>gi|225712004|gb|ACO11848.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290462585|gb|ADD24340.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290561585|gb|ADD38192.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
Length = 242
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +DGI+LA EKR T+ L+ E +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTKDGIVLAVEKRITSSLM-EPSTIEKIVQID 71
Query: 102 DSL 104
L
Sbjct: 72 KHL 74
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +DGI+LA EKR+ + ++ Q++
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTKDGIVLAVEKRITSSLMEPSTIEKIVQID 71
>gi|448506441|ref|ZP_21614473.1| proteasome subunit alpha, partial [Halorubrum distributum JCM 9100]
gi|445699663|gb|ELZ51684.1| proteasome subunit alpha, partial [Halorubrum distributum JCM 9100]
Length = 92
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|448590643|ref|ZP_21650408.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
gi|445734139|gb|ELZ85698.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
Length = 259
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|448448882|ref|ZP_21591380.1| proteasome subunit alpha, partial [Halorubrum litoreum JCM 13561]
gi|445813974|gb|EMA63946.1| proteasome subunit alpha, partial [Halorubrum litoreum JCM 13561]
Length = 108
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|292655249|ref|YP_003535146.1| proteasome subunit alpha [Haloferax volcanii DS2]
gi|448292194|ref|ZP_21482854.1| proteasome subunit alpha [Haloferax volcanii DS2]
gi|300669661|sp|Q9V2V6.2|PSA1_HALVD RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S
proteasome alpha subunit 1; AltName: Full=Proteasome
core protein PsmA 1; Contains: RecName: Full=Proteasome
subunit alpha 1, N-terminally processed
gi|291372203|gb|ADE04430.1| proteasome alpha subunit [Haloferax volcanii DS2]
gi|445572994|gb|ELY27521.1| proteasome subunit alpha [Haloferax volcanii DS2]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|448602650|ref|ZP_21656585.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
gi|445747002|gb|ELZ98459.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|448575121|ref|ZP_21641644.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
gi|445732800|gb|ELZ84382.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
Length = 258
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|448561679|ref|ZP_21634887.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|448586268|ref|ZP_21648342.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
gi|445720307|gb|ELZ71982.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|445724923|gb|ELZ76549.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|29726321|pdb|1J2Q|A Chain A, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726322|pdb|1J2Q|B Chain B, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726323|pdb|1J2Q|C Chain C, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726324|pdb|1J2Q|D Chain D, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726325|pdb|1J2Q|E Chain E, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726326|pdb|1J2Q|F Chain F, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726327|pdb|1J2Q|G Chain G, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 237
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI ++G++L A+KR +KLL E T EKIYK+ +
Sbjct: 6 FSPD-GRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLL-EADTIEKIYKIDE 63
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI ++G++L A+KR+ + ++Y+++
Sbjct: 11 RLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKID 62
>gi|5833206|gb|AAD53404.1|AF126260_1 alpha-1 subunit of 20S proteasome [Haloferax volcanii DS2]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|307353112|ref|YP_003894163.1| proteasome endopeptidase complex subunit alpha [Methanoplanus
petrolearius DSM 11571]
gi|307156345|gb|ADN35725.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
petrolearius DSM 11571]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +G+ DG++L +KR + KLL++ ++ EKI+K+ D
Sbjct: 18 FSPD-GRLYQVEYAREAVKRGTTAVGVKCSDGVVLIVDKRVSTKLLEQ-SSIEKIFKVDD 75
Query: 103 SLNI 106
+ +
Sbjct: 76 HIAV 79
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +G+ DG++L +KR++ + ++++V+
Sbjct: 23 RLYQVEYAREAVKRGTTAVGVKCSDGVVLIVDKRVSTKLLEQSSIEKIFKVD 74
>gi|409096216|ref|ZP_11216240.1| proteasome subunit alpha [Thermococcus zilligii AN1]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +DG++LA EKR T++L+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSRLI-EPSSYEKIFQVDD 74
Query: 103 SL 104
+
Sbjct: 75 RI 76
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +DG++LA EKR+ +++QV+ + I+
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSRLIEPSSYEKIFQVD---DRIAA 78
Query: 63 AGTCLGILAQDGILL 77
A + GI+A +L+
Sbjct: 79 APS--GIIADARVLV 91
>gi|148642305|ref|YP_001272818.1| proteasome subunit alpha [Methanobrevibacter smithii ATCC 35061]
gi|222444524|ref|ZP_03607039.1| hypothetical protein METSMIALI_00136 [Methanobrevibacter smithii
DSM 2375]
gi|261350937|ref|ZP_05976354.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
gi|166199288|sp|A5UJS2.1|PSA_METS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|148551322|gb|ABQ86450.1| proteasome, alpha subunit, PsmA [Methanobrevibacter smithii ATCC
35061]
gi|222434089|gb|EEE41254.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860275|gb|EFC92573.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI +GI+LA +KR T+ L+ E T+ EKI+K+ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLV-EATSIEKIFKIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T +GI +GI+LA +KR + + ++++++ H
Sbjct: 21 RLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
G L D L E+ +++ T SE I
Sbjct: 75 IGAATSGLVADARAL-VERARVEAQINKITYSEPI 108
>gi|448435788|ref|ZP_21586856.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
gi|445683223|gb|ELZ35623.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
Length = 257
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|448424332|ref|ZP_21582382.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|445682325|gb|ELZ34744.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
Length = 262
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|288560613|ref|YP_003424099.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
gi|288543323|gb|ADC47207.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
Length = 294
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ ++DG++L +KR ++L+ E + EKI+++ D
Sbjct: 18 FSPD-GRLFQVEYAREAVKRGTTSLGLKSKDGVVLIVDKRTVSRLV-EAKSIEKIFQIDD 75
Query: 103 SLNIIT 108
+ + T
Sbjct: 76 HIGVAT 81
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T LG+ ++DG++L +KR + +++Q++ H
Sbjct: 23 RLFQVEYAREAVKRGTTSLGLKSKDGVVLIVDKRTVSRLVEAKSIEKIFQID------DH 76
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 77 IGVATSGLVADARALVERAR 96
>gi|448613076|ref|ZP_21662956.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
gi|445739973|gb|ELZ91479.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
Length = 254
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|355572115|ref|ZP_09043297.1| Proteasome subunit alpha [Methanolinea tarda NOBI-1]
gi|354824831|gb|EHF09070.1| Proteasome subunit alpha [Methanolinea tarda NOBI-1]
Length = 241
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++L +KR +++LL E ++ EKI+K+ +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTTAVGIKCRDGVVLIVDKRVSSRLL-EASSIEKIFKIDE 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HIGV 78
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++L +KR++ + ++++++
Sbjct: 21 GRLYQVEYAREAVKRGTTAVGIKCRDGVVLIVDKRVSSRLLEASSIEKIFKID 73
>gi|11498101|ref|NP_069326.1| proteasome subunit alpha [Archaeoglobus fulgidus DSM 4304]
gi|6093781|sp|O29760.1|PSA_ARCFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2650136|gb|AAB90747.1| proteasome, subunit alpha (psmA) [Archaeoglobus fulgidus DSM 4304]
Length = 246
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI ++G++L A+KR +KLL E T EKIYK+ +
Sbjct: 15 FSPD-GRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLL-EADTIEKIYKIDE 72
Query: 103 SL 104
+
Sbjct: 73 HI 74
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI ++G++L A+KR+ + ++Y+++
Sbjct: 20 RLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKID 71
>gi|448502557|ref|ZP_21612670.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
gi|445694052|gb|ELZ46187.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
Length = 257
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|268566775|ref|XP_002639810.1| C. briggsae CBR-PAS-5 protein [Caenorhabditis briggsae]
Length = 249
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EA+ T +GI +G+LLAAEKR+T+KL+ EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EKISKVD 71
Query: 102 DSLNIIT 108
+ +T
Sbjct: 72 QHIGNVT 78
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G+LLAAEKR + ++ +V+ + ++
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGNVTF 79
Query: 63 AG 64
AG
Sbjct: 80 AG 81
>gi|313127016|ref|YP_004037286.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
gi|448288517|ref|ZP_21479715.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
gi|312293381|gb|ADQ67841.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halogeometricum borinquense DSM 11551]
gi|445568902|gb|ELY23477.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
Length = 255
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKSDD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|336121264|ref|YP_004576039.1| proteasome endopeptidase complex subunit alpha [Methanothermococcus
okinawensis IH1]
gi|334855785|gb|AEH06261.1| proteasome endopeptidase complex, alpha subunit
[Methanothermococcus okinawensis IH1]
Length = 274
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+ E + EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAIGIKCKDGVILAVDRRITSKLI-EVCSIEKIFQIDD 73
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAIGIKCKDGVILAVDRRITSKLIEVCSIEKIFQID 72
>gi|429193526|ref|YP_007179204.1| proteasome endopeptidase complex subunit alpha [Natronobacterium
gregoryi SP2]
gi|448323924|ref|ZP_21513367.1| proteasome subunit alpha [Natronobacterium gregoryi SP2]
gi|429137744|gb|AFZ74755.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronobacterium gregoryi SP2]
gi|445619926|gb|ELY73437.1| proteasome subunit alpha [Natronobacterium gregoryi SP2]
Length = 253
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ QDG++LA +KR + LL E ++ EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLL-EDSSVEKLHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ QDG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRV 56
>gi|448361942|ref|ZP_21550555.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
gi|445649622|gb|ELZ02559.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
Length = 283
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G++ +G++LAA KR + LL E + EKI+++ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLL-EPDSVEKIHRVDD 74
Query: 103 SLNIIT 108
L + T
Sbjct: 75 HLAVAT 80
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G++ +G++LAA KR+ + ++++V+ + A++
Sbjct: 22 RLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPDSVEKIHRVDDHL-AVAT 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|289193038|ref|YP_003458979.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
sp. FS406-22]
gi|288939488|gb|ADC70243.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
sp. FS406-22]
Length = 261
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI+ +DG++LA ++R T+KL+ + + EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAIGIVCKDGVVLAVDRRITSKLV-KIRSIEKIFQIDD 73
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI+ +DG++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAIGIVCKDGVVLAVDRRITSKLVKIRSIEKIFQID 72
>gi|448529180|ref|ZP_21620439.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
gi|445709613|gb|ELZ61439.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
Length = 260
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|219853090|ref|YP_002467522.1| proteasome subunit alpha [Methanosphaerula palustris E1-9c]
gi|254783492|sp|B8GEZ3.1|PSA_METPE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|219547349|gb|ACL17799.1| Proteasome endopeptidase complex [Methanosphaerula palustris E1-9c]
Length = 241
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI DGI+L +KR +KLL E ++ EKI+K+ +
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLL-EPSSIEKIFKIDN 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI DGI+L +KR+N + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKID 72
>gi|383625346|ref|ZP_09949752.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|448700326|ref|ZP_21699434.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|445779866|gb|EMA30781.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
Length = 251
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ QDG++LA +KR + LL E ++ EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLL-EDSSVEKLHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ QDG++LA +KR+
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRV 56
>gi|448612287|ref|ZP_21662512.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
gi|445741519|gb|ELZ93019.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
Length = 242
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LGI DG++LAA + +KL+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGIRTVDGVVLAARRATQSKLM-EAESIEKLHKLED 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 TLGAAT 79
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LGI DG++LAA + + +L+++E + A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGIRTVDGVVLAARRATQSKLMEAESIEKLHKLEDTLGAAT 79
>gi|119719497|ref|YP_919992.1| proteasome subunit alpha [Thermofilum pendens Hrk 5]
gi|119524617|gb|ABL77989.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 238
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T LG+ A DG++LA EKR+ + L+ EGT EKI K+
Sbjct: 17 FSPE-GRLYQVEYAFEAVKRGMTALGVKAVDGVVLAVEKRSASPLV-EGT--EKIKKIDS 72
Query: 103 SLNI 106
+ +
Sbjct: 73 HVGV 76
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ T LG+ A DG++LA EKR
Sbjct: 21 GRLYQVEYAFEAVKRGMTALGVKAVDGVVLAVEKR 55
>gi|297804748|ref|XP_002870258.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
lyrata]
gi|297316094|gb|EFH46517.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
lyrata]
Length = 451
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F +SR V + AI +AG+ +GILA+DG++L EK+ T+KLL ++EK+YK+ D
Sbjct: 308 FYFFLSRCVAVSQCLGAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSMSTEKMYKIDD 367
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 1 MSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
+SR V + AI +AG+ +GILA+DG++L EK++
Sbjct: 312 LSRCVAVSQCLGAIGNAGSAIGILAKDGVVLVGEKKV 348
>gi|389846563|ref|YP_006348802.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|448615765|ref|ZP_21664528.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|388243869|gb|AFK18815.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|445751896|gb|EMA03327.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
Length = 252
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLM-EPTSVEKIHKSDD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HIGI 78
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLAADKR 55
>gi|256811314|ref|YP_003128683.1| proteasome subunit alpha [Methanocaldococcus fervens AG86]
gi|256794514|gb|ACV25183.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
fervens AG86]
Length = 261
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI+ +DG++LA ++R T+KL+ + + EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAVGIVCKDGVVLAVDRRITSKLV-KIRSIEKIFQIDD 73
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI+ +DG++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAVGIVCKDGVVLAVDRRITSKLVKIRSIEKIFQID 72
>gi|341883805|gb|EGT39740.1| hypothetical protein CAEBREN_02656 [Caenorhabditis brenneri]
Length = 248
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EA+ T +GI +G+LLAAEKR+T+KL+ EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EKISKVD 71
Query: 102 DSLNI 106
+ +
Sbjct: 72 QHIGV 76
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G+LLAAEKR S+L V A+E IS
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKR---------STSKLM-VNDAIEKISK 69
Query: 63 AGTCLGI 69
+G+
Sbjct: 70 VDQHIGV 76
>gi|29726314|pdb|1J2P|A Chain A, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726315|pdb|1J2P|B Chain B, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726316|pdb|1J2P|C Chain C, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726317|pdb|1J2P|D Chain D, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726318|pdb|1J2P|E Chain E, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726319|pdb|1J2P|F Chain F, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726320|pdb|1J2P|G Chain G, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
Length = 246
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI ++G++L A+KR +KLL E T EKIYK+ +
Sbjct: 15 FSPD-GRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLL-EKDTIEKIYKIDE 72
Query: 103 SL 104
+
Sbjct: 73 HI 74
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI ++G++L A+KR+ + ++Y+++
Sbjct: 20 RLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEKDTIEKIYKID 71
>gi|448491591|ref|ZP_21608431.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
gi|445692591|gb|ELZ44762.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
Length = 257
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|17508493|ref|NP_492765.1| Protein PAS-5 [Caenorhabditis elegans]
gi|12229918|sp|Q95008.1|PSA5_CAEEL RecName: Full=Proteasome subunit alpha type-5; Short=Proteasome
subunit alpha 5
gi|3876333|emb|CAB02097.1| Protein PAS-5 [Caenorhabditis elegans]
Length = 248
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EA+ T +GI +G+LLAAEKR+T+KL+ EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EKISKVD 71
Query: 102 DSLNI 106
+ +
Sbjct: 72 QHIGV 76
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G+LLAAEKR S+L V A+E IS
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKR---------STSKLM-VNDAIEKISK 69
Query: 63 AGTCLGI 69
+G+
Sbjct: 70 VDQHIGV 76
>gi|428166064|gb|EKX35047.1| proteasome subunit alpha type 5 [Guillardia theta CCMP2712]
Length = 239
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ LLD T+ EKI +L
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLLDP-TSIEKIMEL 70
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ L S +E ME SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTS--PLLDPTS----IEKIMELDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLTADARTLVDKAR 93
>gi|11066269|gb|AAG28528.1|AF198387_1 20S proteasome alpha 3 subunit [Trypanosoma brucei]
Length = 286
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE------GTTSE 95
+F P RLYQVEYA EAIS AGT +GIL G++L AE+ + L D + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGTIIGILTTGGVVLDAERGQQHGLFDTENMEDINISGE 69
Query: 96 KIYKLHDSL 104
K+YK+ + L
Sbjct: 70 KVYKISNHL 78
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EAIS AGT +GIL G++L AE+
Sbjct: 17 RLYQVEYAEEAISQAGTIIGILTTGGVVLDAER 49
>gi|448369486|ref|ZP_21556038.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
gi|445650661|gb|ELZ03577.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
Length = 294
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G++ +G++LAA KR + LL E + EKI+++ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLL-EPDSVEKIHRVDD 74
Query: 103 SLNIIT 108
L + T
Sbjct: 75 HLAVAT 80
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G++ +G++LAA KR+ + ++++V+ + A++
Sbjct: 22 RLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPDSVEKIHRVDDHL-AVAT 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|241730530|ref|XP_002413831.1| proteasome subunit alpha type, putative [Ixodes scapularis]
gi|215507647|gb|EEC17139.1| proteasome subunit alpha type, putative [Ixodes scapularis]
Length = 76
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLM-EPTTIEKIVEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 NHI 74
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVT 55
>gi|448455889|ref|ZP_21594821.1| proteasome subunit alpha [Halorubrum lipolyticum DSM 21995]
gi|445813108|gb|EMA63090.1| proteasome subunit alpha [Halorubrum lipolyticum DSM 21995]
Length = 266
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|448470468|ref|ZP_21600475.1| proteasome subunit alpha [Halorubrum kocurii JCM 14978]
gi|445808032|gb|EMA58109.1| proteasome subunit alpha [Halorubrum kocurii JCM 14978]
Length = 262
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|448446634|ref|ZP_21590856.1| proteasome subunit alpha [Halorubrum saccharovorum DSM 1137]
gi|445683778|gb|ELZ36168.1| proteasome subunit alpha [Halorubrum saccharovorum DSM 1137]
Length = 267
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|403374428|gb|EJY87164.1| Proteasome subunit alpha putative [Oxytricha trifallax]
Length = 251
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL QVEYA+E I+ + +G+LA+DG++LAAEK+ +KL S K+YK+
Sbjct: 11 TFNPD-GRLLQVEYAIEHINQDASVIGVLARDGVVLAAEKKEVSKLFIPTKESGKLYKMD 69
Query: 102 DSL 104
+ +
Sbjct: 70 EHI 72
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL QVEYA+E I+ + +G+LA+DG++LAAEK+
Sbjct: 17 RLLQVEYAIEHINQDASVIGVLARDGVVLAAEKK 50
>gi|448358193|ref|ZP_21546878.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
gi|445646764|gb|ELY99748.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
Length = 251
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|222479394|ref|YP_002565631.1| proteasome subunit alpha [Halorubrum lacusprofundi ATCC 49239]
gi|222452296|gb|ACM56561.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 267
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A+DG++LAA+KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLM-EPESIEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRAEDGVVLAADKR 55
>gi|448355908|ref|ZP_21544657.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
gi|445634616|gb|ELY87795.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
Length = 251
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|198432945|ref|XP_002127299.1| PREDICTED: similar to 20S proteasome alpha5 subunit [Ciona
intestinalis]
Length = 273
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI DG++LA EKR T+ L+ E ++ EK++++
Sbjct: 45 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTADGVVLAVEKRITSPLI-EASSIEKVFEI 101
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI DG++LA EKR+ + ++++++ +H
Sbjct: 51 RLFQVEYAIEAIKLGSTAIGIQTADGVVLAVEKRITSPLIEASSIEKVFEID------TH 104
Query: 63 AGTCL-GILAQDGILL---AAEKRNTNKLLDEGTTSEKIYK 99
G + G++A ++ E +N DE + I K
Sbjct: 105 VGCAMSGLIADSKTMIDRARVEAQNHWFTFDEKMRVQSITK 145
>gi|433591738|ref|YP_007281234.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|448334065|ref|ZP_21523249.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
gi|433306518|gb|AGB32330.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|445620793|gb|ELY74281.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
Length = 254
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|289582959|ref|YP_003481425.1| proteasome endopeptidase complex subunit alpha [Natrialba magadii
ATCC 43099]
gi|448283579|ref|ZP_21474852.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
gi|289532512|gb|ADD06863.1| proteasome endopeptidase complex, alpha subunit [Natrialba magadii
ATCC 43099]
gi|445573691|gb|ELY28210.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
Length = 251
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|448351923|ref|ZP_21540717.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
gi|445632483|gb|ELY85695.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
Length = 253
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|91772264|ref|YP_564956.1| proteasome subunit alpha [Methanococcoides burtonii DSM 6242]
gi|91711279|gb|ABE51206.1| Proteasome alpha subunit [Methanococcoides burtonii DSM 6242]
Length = 263
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T GI A+DG++L +KR T++L+ E + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAAGIKAKDGVVLIVDKRITSRLI-EAESIEKIFQIDE 73
Query: 103 SLNIIT 108
+ + T
Sbjct: 74 HIGVAT 79
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T GI A+DG++L +KR+ + +++Q++ H
Sbjct: 21 RLFQVEYAREAVKRGTTAAGIKAKDGVVLIVDKRITSRLIEAESIEKIFQID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 75 IGVATSGLVADARALVDRAR 94
>gi|448738996|ref|ZP_21721016.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
gi|445800810|gb|EMA51158.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
Length = 245
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T LG+ ++G++L AE++ + L+ EG++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSTSLGVRTEEGVVLVAEQQVRSPLM-EGSSIEKLHKVDD 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HIAV 78
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ T LG+ ++G++L AE+++ + +L++V+ + A+
Sbjct: 22 RLYQVEYAREAVERGSTSLGVRTEEGVVLVAEQQVRSPLMEGSSIEKLHKVDDHI-AVGS 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|448364978|ref|ZP_21553553.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
gi|445657202|gb|ELZ10032.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
Length = 253
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|284164986|ref|YP_003403265.1| proteasome endopeptidase complex subunit alpha [Haloterrigena
turkmenica DSM 5511]
gi|284014641|gb|ADB60592.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
turkmenica DSM 5511]
Length = 256
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRV 56
>gi|389848335|ref|YP_006350574.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|448618541|ref|ZP_21666778.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|388245641|gb|AFK20587.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|445746912|gb|ELZ98370.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
Length = 244
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + +KL+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTVDGVVLAARRATQSKLM-EAESIEKLHKLED 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + +L+++E A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTVDGVVLAARRATQSKLMEAESIEKLHKLEDALGAAT 79
>gi|308499903|ref|XP_003112137.1| CRE-PAS-5 protein [Caenorhabditis remanei]
gi|308268618|gb|EFP12571.1| CRE-PAS-5 protein [Caenorhabditis remanei]
Length = 258
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+EA+ T +GI +G+LLAAEKR+T+KL+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLM 59
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYA+EA+ T +GI +G+LLAAEKR
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKR 53
>gi|427787491|gb|JAA59197.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Rhipicephalus pulchellus]
Length = 241
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLM-EPTTIEKIVEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 NHI 74
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRV 54
>gi|433638748|ref|YP_007284508.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halovivax ruber XH-70]
gi|433290552|gb|AGB16375.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halovivax ruber XH-70]
Length = 252
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRIPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +GI DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRI 56
>gi|448397979|ref|ZP_21569917.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
gi|445672195|gb|ELZ24772.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
Length = 252
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|448378130|ref|ZP_21560676.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
gi|445654364|gb|ELZ07216.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
Length = 252
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRIPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +GI DG++LA +KR+
Sbjct: 21 GRLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRI 56
>gi|73669981|ref|YP_305996.1| proteasome subunit alpha [Methanosarcina barkeri str. Fusaro]
gi|121723425|sp|Q469M6.1|PSA_METBF RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|72397143|gb|AAZ71416.1| proteasome, subunit-alpha [Methanosarcina barkeri str. Fusaro]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI A DG++L +KR T++L+ E + EKI+++ D
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLV-EAESIEKIFQIDD 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI A DG++L +KR+ + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQID 72
>gi|448318333|ref|ZP_21507859.1| proteasome subunit alpha [Natronococcus jeotgali DSM 18795]
gi|445599357|gb|ELY53392.1| proteasome subunit alpha [Natronococcus jeotgali DSM 18795]
Length = 253
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|14520823|ref|NP_126298.1| proteasome subunit alpha [Pyrococcus abyssi GE5]
gi|12229944|sp|Q9V122.1|PSA_PYRAB RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|5458039|emb|CAB49529.1| psmA proteasome, subunit alpha (EC 3.4.99.46) [Pyrococcus abyssi
GE5]
gi|380741365|tpe|CCE69999.1| TPA: proteasome subunit alpha [Pyrococcus abyssi GE5]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +DG++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLI-EPESYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +DG++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|6093782|sp|Q59565.1|PSA_METTE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|1002689|gb|AAA93166.1| PsmA [Methanosarcina thermophila TM-1]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI A DG++L +KR T++L+ E + EKI+++ D
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLV-EAESIEKIFQIDD 71
Query: 103 SLNIIT 108
+ T
Sbjct: 72 HIGAAT 77
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI A DG++L +KR+ + +++Q++
Sbjct: 19 RLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQID 70
>gi|57641572|ref|YP_184050.1| proteasome subunit alpha [Thermococcus kodakarensis KOD1]
gi|73921835|sp|Q5JIU9.1|PSA_PYRKO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|57159896|dbj|BAD85826.1| proteasome, alpha subunit [Thermococcus kodakarensis KOD1]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +DG++LA EKR T+KL+ E ++ EKI+ + D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLI-EPSSYEKIFLIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QV YA EA+ T +G+ +DG++LA EKR+
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRIT 57
>gi|448393336|ref|ZP_21567661.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
gi|445663751|gb|ELZ16493.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRV 56
>gi|435846875|ref|YP_007309125.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronococcus occultus SP4]
gi|433673143|gb|AGB37335.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronococcus occultus SP4]
Length = 251
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|12229894|sp|O24733.1|PSA_THEK1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2398843|dbj|BAA22211.1| proteasome alpha subunit [Thermococcus sp. KS-1]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +DG++LA EKR T+KL+ E ++ EKI+ + D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLI-EPSSYEKIFLIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QV YA EA+ T +G+ +DG++LA EKR+
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRIT 57
>gi|321457997|gb|EFX69073.1| hypothetical protein DAPPUDRAFT_231717 [Daphnia pulex]
Length = 242
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLM-EPTTIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRIT 55
>gi|307209861|gb|EFN86640.1| Proteasome subunit alpha type-5 [Harpegnathos saltator]
Length = 242
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLM-EPTTVEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRIT 55
>gi|72006085|ref|XP_782337.1| PREDICTED: proteasome subunit alpha type-5-like [Strongylocentrotus
purpuratus]
Length = 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +GI+LA EKR T+ L+ E T+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLM-EATSIEKIVEI 70
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +GI+LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTS-----PLM-EATSIEKIVEIDSH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLIAD 84
>gi|325959908|ref|YP_004291374.1| proteasome subunit alpha [Methanobacterium sp. AL-21]
gi|325331340|gb|ADZ10402.1| Proteasome subunit alpha [Methanobacterium sp. AL-21]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ + +GI+L +KR T+KL+ E + EKI+++ D
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSLGVKSVEGIVLVVDKRPTSKLV-EPKSIEKIFQIDD 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T LG+ + +GI+L +KR + +++Q++ H
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSVEGIVLVVDKRPTSKLVEPKSIEKIFQID------DH 74
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL 87
G L D L + R +++
Sbjct: 75 IGAATSGLVADARALVEKARMESQI 99
>gi|212223172|ref|YP_002306408.1| proteasome subunit alpha [Thermococcus onnurineus NA1]
gi|229598016|sp|B6YSH9.1|PSA_THEON RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|212008129|gb|ACJ15511.1| Proteasome alpha subunit [Thermococcus onnurineus NA1]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++G++LA EKR T+KL+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLI-EPSSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ ++G++LA EKR+ +++Q++ H
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQID------DH 75
Query: 63 -AGTCLGILAQDGILL 77
A GI+A +L+
Sbjct: 76 IAAAPSGIIADARVLV 91
>gi|91087635|ref|XP_973117.1| PREDICTED: similar to proteasome zeta subunit [Tribolium castaneum]
gi|270009423|gb|EFA05871.1| hypothetical protein TcasGA2_TC008671 [Tribolium castaneum]
Length = 242
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLM-EPTTIEKIVEV 70
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ P M +E +E H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITS-----PLMEPT-TIEKIVEVDKH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAVSGLMAD 84
>gi|397775148|ref|YP_006542694.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|448343949|ref|ZP_21532866.1| proteasome subunit alpha [Natrinema gari JCM 14663]
gi|397684241|gb|AFO58618.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|445622032|gb|ELY75497.1| proteasome subunit alpha [Natrinema gari JCM 14663]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|341582111|ref|YP_004762603.1| proteasome subunit alpha [Thermococcus sp. 4557]
gi|340809769|gb|AEK72926.1| proteasome subunit alpha [Thermococcus sp. 4557]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++G++LA EKR T+KL+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKNGVVLAVEKRITSKLI-EPSSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QV YA EA+ T +G+ ++G++LA EKR+ +++Q++
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKNGVVLAVEKRITSKLIEPSSYEKIFQID 73
>gi|21228722|ref|NP_634644.1| proteasome subunit alpha [Methanosarcina mazei Go1]
gi|452211127|ref|YP_007491241.1| Proteasome subunit alpha,archaeal [Methanosarcina mazei Tuc01]
gi|23821980|sp|Q8PTU1.1|PSA_METMA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|20907231|gb|AAM32316.1| Proteasome, subunit-alpha [Methanosarcina mazei Go1]
gi|452101029|gb|AGF97969.1| Proteasome subunit alpha,archaeal [Methanosarcina mazei Tuc01]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI A DG++L +KR T++L+ E + EKI+++ D
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLV-EAESIEKIFQIDD 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI A DG++L +KR+ + +++Q++
Sbjct: 20 GRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQID 72
>gi|307187742|gb|EFN72714.1| Proteasome subunit alpha type-5 [Camponotus floridanus]
Length = 270
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLM-EPTTVEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRIT 55
>gi|328773136|gb|EGF83173.1| hypothetical protein BATDEDRAFT_84713 [Batrachochytrium
dendrobatidis JAM81]
Length = 250
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 36/44 (81%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
R++QVEYA++A+ ++GTC+GI A+DG++LA EK +KLL G+
Sbjct: 20 RIFQVEYAVKAVENSGTCIGIRAKDGVVLAHEKLVQSKLLVPGS 63
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ 52
R++QVEYA++A+ ++GTC+GI A+DG++LA EK L Q +P +R Q
Sbjct: 20 RIFQVEYAVKAVENSGTCIGIRAKDGVVLAHEK-LVQSKLLVPGSNRRIQ 68
>gi|448339139|ref|ZP_21528170.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
gi|445621110|gb|ELY74596.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|448328343|ref|ZP_21517655.1| proteasome subunit alpha [Natrinema versiforme JCM 10478]
gi|445615867|gb|ELY69505.1| proteasome subunit alpha [Natrinema versiforme JCM 10478]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HVGI 78
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|332016307|gb|EGI57220.1| Proteasome subunit alpha type-5 [Acromyrmex echinatior]
Length = 242
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLM-EPTTVEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRIT 55
>gi|297829986|ref|XP_002882875.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
gi|297328715|gb|EFH59134.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|448377613|ref|ZP_21560309.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
gi|445655557|gb|ELZ08402.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ A DG++LAA KR + LL E + K++++ D
Sbjct: 16 FSPD-GRLYQVEYAREAVERGSPAVGVRAADGVVLAARKRRASPLL-EADSVAKLHRIDD 73
Query: 103 SLNIIT 108
+ I +
Sbjct: 74 HIAIAS 79
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ A DG++LAA KR +++L++++ + AI+
Sbjct: 21 RLYQVEYAREAVERGSPAVGVRAADGVVLAARKRRASPLLEADSVAKLHRIDDHI-AIAS 79
Query: 63 AG 64
AG
Sbjct: 80 AG 81
>gi|15231824|ref|NP_188046.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
gi|18206373|sp|Q42134.2|PSA5B_ARATH RecName: Full=Proteasome subunit alpha type-5-B; AltName: Full=20S
proteasome alpha subunit E-2; AltName: Full=Proteasome
component Z
gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|3421090|gb|AAC32061.1| 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|9279577|dbj|BAB01035.1| 20S proteasome subunit PAE-like protein [Arabidopsis thaliana]
gi|17065644|gb|AAL33816.1| putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|332641977|gb|AEE75498.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|322799258|gb|EFZ20649.1| hypothetical protein SINV_00130 [Solenopsis invicta]
Length = 242
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLM-EPTTVEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRIT 55
>gi|448733558|ref|ZP_21715801.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
gi|445802447|gb|EMA52752.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
Length = 245
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T LG+ +DG+ L AE+R + L+ E ++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSTSLGVRTEDGVALVAEQRVRSPLM-EQSSIEKLHKVDD 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HVAV 78
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T LG+ +DG+ L AE+R+ + +L++V+
Sbjct: 22 RLYQVEYAREAVERGSTSLGVRTEDGVALVAEQRVRSPLMEQSSIEKLHKVD 73
>gi|15220961|ref|NP_175788.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|145325425|ref|NP_001077717.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|297853172|ref|XP_002894467.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|12229903|sp|O81149.1|PSA5A_ARATH RecName: Full=Proteasome subunit alpha type-5-A; AltName: Full=20S
proteasome alpha subunit E-1
gi|6056394|gb|AAF02858.1|AC009324_7 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|3421087|gb|AAC32060.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|18252873|gb|AAL62363.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21387063|gb|AAM47935.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21554176|gb|AAM63255.1| Proteasome subunit alpha type 5-1 (20S proteasome alpha subunit E1)
[Arabidopsis thaliana]
gi|297340309|gb|EFH70726.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|332194888|gb|AEE33009.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|332194889|gb|AEE33010.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|41352543|gb|AAS01024.1| proteasome alpha subunit [Ornithodoros moubata]
Length = 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLM-EPTTIEKIVEI 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRV 54
>gi|448345142|ref|ZP_21534042.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
gi|445636091|gb|ELY89255.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
Length = 256
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HVGI 78
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRV 56
>gi|359843270|gb|AEV89770.1| proteasome zeta subunit, partial [Schistocerca gregaria]
Length = 110
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLM-EPTTIEKIVEV 70
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ P M +E +E H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITS-----PLMEPT-TIEKIVEVDKH 73
Query: 63 AGTCL-GILAQDGILL 77
G + G++A +L
Sbjct: 74 IGCAVSGLMADSRTML 89
>gi|15668771|ref|NP_247571.1| proteasome subunit alpha [Methanocaldococcus jannaschii DSM 2661]
gi|2499836|sp|Q60177.1|PSA_METJA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|1591299|gb|AAB98581.1| proteasome, subunit alpha (psmA) [Methanocaldococcus jannaschii DSM
2661]
Length = 261
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+ + + EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLV-KIRSIEKIFQIDD 73
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQID 72
>gi|442755539|gb|JAA69929.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Ixodes ricinus]
Length = 241
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLM-EPTTIEKIVEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 NHI 74
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRV 54
>gi|448321224|ref|ZP_21510704.1| proteasome subunit alpha [Natronococcus amylolyticus DSM 10524]
gi|445604084|gb|ELY58035.1| proteasome subunit alpha [Natronococcus amylolyticus DSM 10524]
Length = 252
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLL-EDSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRV 56
>gi|114050993|ref|NP_001040146.1| proteasome zeta subunit [Bombyx mori]
gi|87248207|gb|ABD36156.1| proteasome zeta subunit [Bombyx mori]
Length = 243
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLM-EPTTIEKIVEV 70
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRIT 55
>gi|346469699|gb|AEO34694.1| hypothetical protein [Amblyomma maculatum]
Length = 241
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRVTSSLM-EPTTIEKIVEI 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRV 54
>gi|289740945|gb|ADD19220.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Glossina
morsitans morsitans]
Length = 242
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +G+ +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITSPLM-EPTTVEKIVEV 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +G++LA EKR+ P M VE +E H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITS-----PLMEPT-TVEKIVEVDRH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 74 IGCATSGLMADARTLIERAR 93
>gi|15678713|ref|NP_275829.1| proteasome subunit alpha [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6093783|sp|O26782.1|PSA_METTH RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2621771|gb|AAB85191.1| proteasome, alpha subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 248
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ +++GI+L +KR T+KL+ E + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLV-EPKSIEKIFQIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T LG+ +++GI+L +KR + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQID 72
>gi|424814250|ref|ZP_18239428.1| 20S proteasome, alpha subunit [Candidatus Nanosalina sp. J07AB43]
gi|339757866|gb|EGQ43123.1| 20S proteasome, alpha subunit [Candidatus Nanosalina sp. J07AB43]
Length = 237
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT-TSEKIYKLH 101
F P RL+QVEYA EA+ T LGI+ +DG++LAA RNT+ L G EK++K+
Sbjct: 19 FSPD-GRLFQVEYAKEAVKKGATALGIVYEDGVVLAA-TRNTSDL---GVRNPEKVFKVE 73
Query: 102 DSLNI 106
D L I
Sbjct: 74 DHLGI 78
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T LGI+ +DG++LAA R D + + ++++VE
Sbjct: 23 GRLFQVEYAKEAVKKGATALGIVYEDGVVLAA-TRNTSDLG-VRNPEKVFKVE------D 74
Query: 62 HAGTCLGILAQDGILLAAEKRN 83
H G + L DG L E RN
Sbjct: 75 HLGIAMSGLVADGRTLVEEARN 96
>gi|304314833|ref|YP_003849980.1| proteasome, subunit alpha [Methanothermobacter marburgensis str.
Marburg]
gi|302588292|gb|ADL58667.1| predicted proteasome, subunit alpha [Methanothermobacter
marburgensis str. Marburg]
Length = 248
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ +++GI+L +KR T+KL+ E + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLV-EPKSIEKIFQIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T LG+ +++GI+L +KR + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQID 72
>gi|239782083|pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782084|pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782085|pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782086|pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782087|pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782088|pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782089|pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782097|pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782098|pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782099|pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782100|pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782101|pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782102|pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782103|pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 264
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+ + + EKI+++ D
Sbjct: 19 FSPE-GRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLV-KIRSIEKIFQIDD 76
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 24 RLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQID 75
>gi|157105494|ref|XP_001648894.1| proteasome subunit alpha type [Aedes aegypti]
gi|157105496|ref|XP_001648895.1| proteasome subunit alpha type [Aedes aegypti]
gi|94469194|gb|ABF18446.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Aedes
aegypti]
gi|108880078|gb|EAT44303.1| AAEL004308-PA [Aedes aegypti]
gi|108880079|gb|EAT44304.1| AAEL004308-PB [Aedes aegypti]
Length = 242
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI Q+G+++A EKR T+ L+ E T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITSPLM-EPTKVEKIVEV 70
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI Q+G+++A EKR+ P M +VE +E H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITS-----PLMEPT-KVEKIVEVDRH 73
Query: 63 AGTCL-GILAQDGILL---AAEKRNTNKLLDEGTTSEKIYKLHDSLNI 106
G G++A LL E +N + DE + E + SL I
Sbjct: 74 IGCATSGLMADSRTLLDRARVECQNHWFVYDERMSVESCAQAVSSLAI 121
>gi|315229924|ref|YP_004070360.1| proteasome subunit alpha [Thermococcus barophilus MP]
gi|315182952|gb|ADT83137.1| proteasome subunit alpha [Thermococcus barophilus MP]
Length = 260
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV+YA EA+ T +G+ ++G++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVQYAREAVKRGATAVGVKCKEGVVLAVEKRVTSRLI-EPESYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV+YA EA+ T +G+ ++G++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVQYAREAVKRGATAVGVKCKEGVVLAVEKRVTSRLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|448419987|ref|ZP_21580797.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
gi|445674155|gb|ELZ26700.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
Length = 260
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++LAA+KR+ + L+ E T+ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSEGVVLAADKRSRSPLM-EPTSVEKIHKADE 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTSEGVVLAADKR 55
>gi|357152570|ref|XP_003576163.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 VGCAMSGLIADARTLVEHAR 93
>gi|326492526|dbj|BAK02046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 VGCAMSGLIADARTLVEHAR 93
>gi|339237383|ref|XP_003380246.1| proteasome subunit alpha type-2-A [Trichinella spiralis]
gi|316976947|gb|EFV60138.1| proteasome subunit alpha type-2-A [Trichinella spiralis]
Length = 277
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GIL ++G+LL EKR T+ L+ ++ EKI K+
Sbjct: 36 TFSPE-GRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVP-SSVEKIMKID 93
Query: 102 DSLNIIT 108
+ + T
Sbjct: 94 NHIGCTT 100
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GIL ++G+LL EKR+ + ++ +++
Sbjct: 42 RLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKID 93
>gi|358060183|dbj|GAA94242.1| hypothetical protein E5Q_00891 [Mixia osmundae IAM 14324]
Length = 322
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 31/130 (23%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQ-------DGILLAAEKRL----------------NQ 39
RLYQVEYAME++SHAG +GILA + +L A EK+
Sbjct: 17 RLYQVEYAMESVSHAGCIVGILAPGKGSKQAEDMLKATEKKTADSTVSSAAAAAATAPVA 76
Query: 40 DFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDE--GTTSEKI 97
S ++ + AM+ S G + + G++LAAEKR T+KLLD+ G EKI
Sbjct: 77 STSSPAAPTKSTDEDIAMKDESTEGRPV----RRGVILAAEKRVTSKLLDKEAGGGREKI 132
Query: 98 YKLHDSLNII 107
+ ++ NII
Sbjct: 133 FGINS--NII 140
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 35 KRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQ-------DGILLAAEKR 82
+R + + RLYQVEYAME++SHAG +GILA + +L A EK+
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYAMESVSHAGCIVGILAPGKGSKQAEDMLKATEKK 57
>gi|357156162|ref|XP_003577362.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 VGCAMSGLIADARTLVEHAR 93
>gi|27525440|emb|CAD47833.1| 20S proteasome alpha 5 subunit [Ceratitis capitata]
Length = 241
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI G++LAAEKR+T++L+ ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTSSGVVLAAEKRSTSELM-VSSSVEKILQVD 71
Query: 102 DSLNIIT 108
+ +T
Sbjct: 72 RHIGCVT 78
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI G++LAAEKR + + ++ QV+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTSSGVVLAAEKRSTSELMVSSSVEKILQVD 71
>gi|115486269|ref|NP_001068278.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|12229920|sp|Q9LSU1.1|PSA5_ORYSJ RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|8671498|dbj|BAA96832.1| alpha 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|77551899|gb|ABA94696.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
Japonica Group]
gi|113645500|dbj|BAF28641.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|215737179|dbj|BAG96108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765321|dbj|BAG87018.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186097|gb|EEC68524.1| hypothetical protein OsI_36813 [Oryza sativa Indica Group]
gi|222616332|gb|EEE52464.1| hypothetical protein OsJ_34630 [Oryza sativa Japonica Group]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|226499840|ref|NP_001149918.1| proteasome subunit alpha type 5 [Zea mays]
gi|242071701|ref|XP_002451127.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|195635461|gb|ACG37199.1| proteasome subunit alpha type 5 [Zea mays]
gi|223946287|gb|ACN27227.1| unknown [Zea mays]
gi|241936970|gb|EES10115.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|414864838|tpg|DAA43395.1| TPA: proteasome subunit alpha type [Zea mays]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|383624771|ref|ZP_09949177.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|448697112|ref|ZP_21698268.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|445782241|gb|EMA33091.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G++A D +LAA KR + LL E T+ EK++ + D
Sbjct: 17 FSPD-GRLYQVEYAREAVDRGAPSVGVVADDCTVLAARKRVRSPLL-EPTSVEKVHAVDD 74
Query: 103 SLNIIT 108
L I +
Sbjct: 75 HLAIAS 80
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G++A D +LAA KR+ + +++ V+ + AI+
Sbjct: 22 RLYQVEYAREAVDRGAPSVGVVADDCTVLAARKRVRSPLLEPTSVEKVHAVDDHL-AIAS 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|448391970|ref|ZP_21567065.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
gi|445665382|gb|ELZ18060.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
Length = 249
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++LAA+++ ++ L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRTPDGVVLAADRQVSSSLM-EPSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA EA+ +GI DG++LAA+++++
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRTPDGVVLAADRQVS 57
>gi|76802504|ref|YP_327512.1| proteasome subunit alpha [Natronomonas pharaonis DSM 2160]
gi|121708068|sp|Q3IPJ1.1|PSA_NATPD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|76558369|emb|CAI49960.1| proteasome alpha subunit [Natronomonas pharaonis DSM 2160]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI +DG++L +KR + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLM-ERTSVEKIHKADD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HIGI 78
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +GI +DG++L +KR+ P M R ++E I
Sbjct: 22 RLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRS-----PLMERT-----SVEKIHK 71
Query: 63 AGTCLGI 69
A +GI
Sbjct: 72 ADDHIGI 78
>gi|242036903|ref|XP_002465846.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
gi|241919700|gb|EER92844.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|226530826|ref|NP_001148604.1| proteasome subunit alpha type 5 [Zea mays]
gi|195620714|gb|ACG32187.1| proteasome subunit alpha type 5 [Zea mays]
gi|413957015|gb|AFW89664.1| hypothetical protein ZEAMMB73_505721 [Zea mays]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|170049221|ref|XP_001854661.1| proteasome subunit alpha type [Culex quinquefasciatus]
gi|167871080|gb|EDS34463.1| proteasome subunit alpha type [Culex quinquefasciatus]
Length = 276
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI Q+G+++A EKR T+ L+ E T EKI ++
Sbjct: 48 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITSPLM-EPTKVEKIVEV 104
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI Q+G+++A EKR+ P M +VE +E H
Sbjct: 54 RLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITS-----PLMEPT-KVEKIVEVDRH 107
Query: 63 AGTCL-GILAQDGILL 77
G G++A LL
Sbjct: 108 IGCATSGLMADSRTLL 123
>gi|288930694|ref|YP_003434754.1| proteasome endopeptidase complex, subunit alpha [Ferroglobus
placidus DSM 10642]
gi|288892942|gb|ADC64479.1| proteasome endopeptidase complex, alpha subunit [Ferroglobus
placidus DSM 10642]
Length = 241
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +G+ ++G++L A++R ++LL E T EKIYK+ +
Sbjct: 15 FSPD-GRLFQVEYAREAVKRGATAIGVKTKEGVVLLADRRVASRLL-EADTIEKIYKIDE 72
Query: 103 SL 104
+
Sbjct: 73 HI 74
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +G+ ++G++L A++R+ + ++Y+++
Sbjct: 20 RLFQVEYAREAVKRGATAIGVKTKEGVVLLADRRVASRLLEADTIEKIYKID 71
>gi|448729603|ref|ZP_21711918.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
gi|445794905|gb|EMA45443.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
Length = 245
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ LG+ +DG++L AE+R + L+ E ++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSPSLGVRTEDGVVLVAEQRVRSPLM-EQSSIEKLHKVDD 74
Query: 103 SLNI 106
+ +
Sbjct: 75 HIAV 78
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ LG+ +DG++L AE+R+ + +L++V+
Sbjct: 22 RLYQVEYAREAVERGSPSLGVRTEDGVVLVAEQRVRSPLMEQSSIEKLHKVD 73
>gi|410721461|ref|ZP_11360796.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598918|gb|EKQ53481.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 251
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
++ S RL+QVEYA EA+ T LG+ + +GI+L +KR ++KL+ E T+ EKI
Sbjct: 10 DKGISIFSPDGRLFQVEYAREAVKRGTTSLGVKSAEGIVLVVDKRPSSKLV-EPTSIEKI 68
Query: 98 YKLHDSLNIIT 108
+++ + + T
Sbjct: 69 FQIDEHIGAAT 79
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T LG+ + +GI+L +KR + + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSAEGIVLVVDKRPSSKLVEPTSIEKIFQID 72
>gi|408382264|ref|ZP_11179809.1| proteasome subunit alpha [Methanobacterium formicicum DSM 3637]
gi|407814920|gb|EKF85542.1| proteasome subunit alpha [Methanobacterium formicicum DSM 3637]
Length = 251
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
++ S RL+QVEYA EA+ T LG+ + +GI+L +KR ++KL+ E T+ EKI
Sbjct: 10 DKGISIFSPDGRLFQVEYAREAVKRGTTSLGVKSAEGIVLVVDKRPSSKLV-EPTSIEKI 68
Query: 98 YKLHDSLNIIT 108
+++ + + T
Sbjct: 69 FQIDEHIGAAT 79
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T LG+ + +GI+L +KR + + +++Q++
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSAEGIVLVVDKRPSSKLVEPTSIEKIFQID 72
>gi|322368955|ref|ZP_08043522.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
gi|320551686|gb|EFW93333.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
Length = 249
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +DG++LAA K + LL E EK++K+ D
Sbjct: 16 FSPD-GRLYQVEYAREAVRRGSVSVGVRTRDGVVLAARKHVRSPLL-EADGIEKLHKIDD 73
Query: 103 SLNIIT 108
L +++
Sbjct: 74 HLGVVS 79
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EA+ +G+ +DG++LAA K
Sbjct: 21 RLYQVEYAREAVRRGSVSVGVRTRDGVVLAARK 53
>gi|125554282|gb|EAY99887.1| hypothetical protein OsI_21882 [Oryza sativa Indica Group]
Length = 226
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 57 MEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
MEAI +AG+ LG+LA DG++L EK+ T+KLL ++EK+YK+ L
Sbjct: 1 MEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHL 48
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 11 MEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH-AGTCLGI 69
MEAI +AG+ LG+LA DG++L EK++ S L SR + Y ++ SH A GI
Sbjct: 1 MEAIGNAGSALGVLAADGVVLVGEKKVT---SKLLQTSRSAEKMYKID--SHLACAVAGI 55
Query: 70 LAQDGILLAAEKRNTNKL 87
++ ILL NT +L
Sbjct: 56 MSDANILL-----NTARL 68
>gi|195123867|ref|XP_002006423.1| GI18573 [Drosophila mojavensis]
gi|193911491|gb|EDW10358.1| GI18573 [Drosophila mojavensis]
Length = 245
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +D ++LA EKR T+ ++ T EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTKDSVVLAVEKRITSPMMVPKTV-EKIVKVD 71
Query: 102 DSLNIIT 108
D + T
Sbjct: 72 DHIGCAT 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +D ++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTKDSVVLAVEKRITSPMMVPKTVEKIVKVD 71
>gi|357625487|gb|EHJ75913.1| proteasome zeta subunit [Danaus plexippus]
Length = 269
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIGTSEGVVLAVEKRITSPLM-EPTTIEKIVEV 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIGTSEGVVLAVEKRIT 55
>gi|348686647|gb|EGZ26462.1| hypothetical protein PHYSODRAFT_354158 [Phytophthora sojae]
Length = 244
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL+ G+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSPLLEPGSI-EKIMEV 70
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI ++G++LA EKRL + +E ME H
Sbjct: 20 RLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSP------LLEPGSIEKIMEVDRH 73
Query: 63 AGTCLGILAQD 73
G + + D
Sbjct: 74 VGAAMSGITAD 84
>gi|217071540|gb|ACJ84130.1| unknown [Medicago truncatula]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLITDARTLVEHAR 93
>gi|388520027|gb|AFK48075.1| unknown [Medicago truncatula]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLITDARTLVEHAR 93
>gi|388510594|gb|AFK43363.1| unknown [Medicago truncatula]
gi|388521531|gb|AFK48827.1| unknown [Medicago truncatula]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|374628426|ref|ZP_09700811.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
limicola DSM 2279]
gi|373906539|gb|EHQ34643.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
limicola DSM 2279]
Length = 253
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI DGI+L +KR ++KLL E T+ EKI+ + +
Sbjct: 18 FSPD-GRLYQVEYAREAVKRGTTAVGIKCSDGIVLIVDKRISSKLL-EQTSIEKIFMIDE 75
Query: 103 SLNI 106
+ +
Sbjct: 76 HIAV 79
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA EA+ T +GI DGI+L +KR++
Sbjct: 23 RLYQVEYAREAVKRGTTAVGIKCSDGIVLIVDKRIS 58
>gi|301103320|ref|XP_002900746.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
T30-4]
gi|262101501|gb|EEY59553.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
T30-4]
Length = 244
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL+ G+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSPLLEPGSI-EKIMEV 70
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI ++G++LA EKRL + +E ME H
Sbjct: 20 RLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSP------LLEPGSIEKIMEVDKH 73
Query: 63 AGTCLGILAQD 73
G + + D
Sbjct: 74 VGAAMSGITAD 84
>gi|433639119|ref|YP_007284879.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
gi|433290923|gb|AGB16746.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
Length = 256
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA KR + LL+ + + K++++ D
Sbjct: 16 FSPD-GRLYQVEYAREAVERGSPAVGVRVADGVVLAARKRRASPLLEPDSVA-KLHRIDD 73
Query: 103 SLNI 106
++I
Sbjct: 74 HISI 77
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ DG++LAA KR
Sbjct: 21 RLYQVEYAREAVERGSPAVGVRVADGVVLAARKR 54
>gi|302848036|ref|XP_002955551.1| 20S proteasome alpha subunit B [Volvox carteri f. nagariensis]
gi|300259174|gb|EFJ43404.1| 20S proteasome alpha subunit B [Volvox carteri f. nagariensis]
Length = 235
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P +L Q+EYA+ A++ T LGI A DG+++A EK+ + L+DE TT +KI +
Sbjct: 12 TFSPS-GKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDE-TTVQKIMTIT 69
Query: 102 DSLNII 107
S+ ++
Sbjct: 70 PSIGVV 75
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
+L Q+EYA+ A++ T LGI A DG+++A EK+L
Sbjct: 18 KLVQIEYALNAVAAGATSLGISATDGVVIATEKKL 52
>gi|397643824|gb|EJK76103.1| hypothetical protein THAOC_02158 [Thalassiosira oceanica]
Length = 268
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ +AGT LG+ +DG+++A EK NK+L TT +I+ +
Sbjct: 14 TFSPD-GRIFQVEYAAKAVENAGTALGLKCRDGVVMAVEKPLQNKMLVAKTTGRRIHTVD 72
Query: 102 D 102
+
Sbjct: 73 E 73
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL-NQDFSFLPHMSRLYQVEYAMEAIS 61
R++QVEYA +A+ +AGT LG+ +DG+++A EK L N+ R++ V+
Sbjct: 20 RIFQVEYAAKAVENAGTALGLKCRDGVVMAVEKPLQNKMLVAKTTGRRIHTVD------E 73
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
H+G + DG ++ N+ +E + E+ Y
Sbjct: 74 HSGVAITGFVSDG------RQIINRAREEASNYEETY 104
>gi|390960836|ref|YP_006424670.1| proteasome subunit alpha [Thermococcus sp. CL1]
gi|390519144|gb|AFL94876.1| proteasome subunit alpha [Thermococcus sp. CL1]
Length = 260
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++G++LA EKR T++L+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSRLI-EPSSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ ++G++LA EKR+ +++Q++ H
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSRLIEPSSYEKIFQID------DH 75
Query: 63 -AGTCLGILAQDGILL 77
A GI+A +L+
Sbjct: 76 IAAAPSGIIADARVLV 91
>gi|325969159|ref|YP_004245351.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323708362|gb|ADY01849.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 246
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P LYQV YA EA+ +GI DG++LAAEKR + L+D G+ EK+Y + D
Sbjct: 16 FSPE-GELYQVRYAGEAVKRGWATIGIKCVDGVVLAAEKRKVSSLIDLGSI-EKVYMVDD 73
Query: 103 SLNI 106
+ I
Sbjct: 74 HVGI 77
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV YA EA+ +GI DG++LAAEKR L + ++Y V+ H
Sbjct: 22 LYQVRYAGEAVKRGWATIGIKCVDGVVLAAEKRKVSSLIDLGSIEKVYMVD------DHV 75
Query: 64 GTCLGILAQDGILL---AAEKRNTNKLL 88
G L D +L A ++ T++LL
Sbjct: 76 GIAASGLLSDARVLIEYARQEAQTHRLL 103
>gi|302828268|ref|XP_002945701.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
gi|300268516|gb|EFJ52696.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
Length = 249
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRVTSPLL-EPSSIEKIMEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 EHM 74
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI ++G++LA EKR+
Sbjct: 20 RLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRVT 55
>gi|448348492|ref|ZP_21537341.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
gi|445642859|gb|ELY95921.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
Length = 289
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G++ +G++LAA KR + LL E + EKI+++ +
Sbjct: 17 FSPD-GRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLL-EPDSVEKIHRVDE 74
Query: 103 SLNIIT 108
L + T
Sbjct: 75 HLAVAT 80
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G++ +G++LAA KR+ + ++++V+ + A++
Sbjct: 22 RLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPDSVEKIHRVDEHL-AVAT 80
Query: 63 AG 64
AG
Sbjct: 81 AG 82
>gi|281204809|gb|EFA79004.1| proteasome subunit alpha type 6 [Polysphondylium pallidum PN500]
Length = 247
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P +LYQVEY+ +AI G T +GI +D +++AA+K+ +KL+D T S IYK+
Sbjct: 17 FSPQ-GKLYQVEYSFKAIKSGGLTSIGIRGKDTVVVAAQKKIPDKLIDPSTVSS-IYKIT 74
Query: 102 DSLNII 107
D L I
Sbjct: 75 DYLGCI 80
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQV 53
+LYQVEY+ +AI G T +GI +D +++AA+K++ +S +Y++
Sbjct: 22 KLYQVEYSFKAIKSGGLTSIGIRGKDTVVVAAQKKIPDKLIDPSTVSSIYKI 73
>gi|448479275|ref|ZP_21604127.1| short-chain dehydrogenase/reductase SDR [Halorubrum arcis JCM
13916]
gi|445822553|gb|EMA72317.1| short-chain dehydrogenase/reductase SDR [Halorubrum arcis JCM
13916]
Length = 555
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNIIT 108
RLYQVEYA EA+ +GI A+DG++LAA+KR + L+ E + EK++K D + + +
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLM-EPESIEKLHKADDHVGVAS 80
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI A+DG++LAA+KR
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRAEDGVVLAADKR 55
>gi|77551900|gb|ABA94697.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
Japonica Group]
Length = 184
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 EHI 74
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|291001023|ref|XP_002683078.1| proteasome subunit alpha type 5 [Naegleria gruberi]
gi|284096707|gb|EFC50334.1| proteasome subunit alpha type 5 [Naegleria gruberi]
Length = 251
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI DG++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFNPQ-GRLFQVEYAIEAIKLGSTAVGIQTPDGVVLAVEKRLTSSLL-EPSSVEKIMEI 70
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI DG++LA EKRL S L S VE ME SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGIQTPDGVVLAVEKRLTS--SLLEPSS----VEKIMEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLTADARTLVEHAR 93
>gi|380011435|ref|XP_003689811.1| PREDICTED: proteasome subunit alpha type-5-like [Apis florea]
Length = 242
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++L EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLM-EPTTVEKIVEI 70
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++L EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRI 54
>gi|332372913|gb|AEE61598.1| unknown [Dendroctonus ponderosae]
Length = 257
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI G++LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGISTNQGVVLAVEKRITSNLM-EPTTIEKIVEV 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI G++LA EKR+ + + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGISTNQGVVLAVEKRITSNLMEPTTIEKIVEVD 71
>gi|407406568|gb|EKF30844.1| proteasome alpha 5 subunit, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 260
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI D +L+AAEKR+ M+++ +++Y H
Sbjct: 35 RIFQIEYAIEAIKLGSTSLGIQTPDAVLIAAEKRVPSVLVDPSSMNKILEIDY------H 88
Query: 63 AGTCLGILAQDGILLAAEKR 82
GT L + D +L R
Sbjct: 89 MGTVLSGMVADARILVEHAR 108
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
+F P R++Q+EYA+EAI T LGI D +L+AAEKR + L+D +
Sbjct: 29 TFSPE-GRIFQIEYAIEAIKLGSTSLGIQTPDAVLIAAEKRVPSVLVDPSS 78
>gi|340713776|ref|XP_003395412.1| PREDICTED: proteasome subunit alpha type-5-like [Bombus terrestris]
gi|350409380|ref|XP_003488715.1| PREDICTED: proteasome subunit alpha type-5-like [Bombus impatiens]
Length = 269
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++L EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLM-EPTTVEKIVEI 70
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++L EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRI 54
>gi|328775859|ref|XP_624341.2| PREDICTED: proteasome subunit alpha type-5 [Apis mellifera]
Length = 269
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++L EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLM-EPTTVEKIVEI 70
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++L EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRI 54
>gi|20093823|ref|NP_613670.1| proteasome subunit alpha [Methanopyrus kandleri AV19]
gi|23821987|sp|Q8TYB7.1|PSA_METKA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|19886746|gb|AAM01600.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 246
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LGI ++G++L +KR T+KL+ E + EK+Y++
Sbjct: 17 FSPD-GRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLI-EPESIEKVYQIDT 74
Query: 103 SLNIIT 108
+ T
Sbjct: 75 HIGAAT 80
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T LGI ++G++L +KR+ + ++YQ++ +H
Sbjct: 22 RLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQID------TH 75
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D +L R
Sbjct: 76 IGAATAGLVADARVLVERAR 95
>gi|388496446|gb|AFK36289.1| unknown [Medicago truncatula]
Length = 186
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|324515585|gb|ADY46251.1| Proteasome subunit alpha type-5 [Ascaris suum]
Length = 248
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+EA+ T +GI +G++LAAEKR T+KL+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIRTNEGVVLAAEKRATSKLM 59
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G++LAAEKR + ++ +V+ + A++
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIRTNEGVVLAAEKRATSKLMVNDAIEKISKVDSHV-AVTF 78
Query: 63 AG 64
AG
Sbjct: 79 AG 80
>gi|217071324|gb|ACJ84022.1| unknown [Medicago truncatula]
Length = 171
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 DSLN 105
D +
Sbjct: 72 DHIG 75
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|383319308|ref|YP_005380149.1| proteasome endopeptidase complex subunit alpha [Methanocella
conradii HZ254]
gi|379320678|gb|AFC99630.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanocella conradii HZ254]
Length = 256
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++DGI L +KR + KLL E + EKI+K+ D
Sbjct: 18 FSPD-GRLFQVHYAQEAVRRGATVMGLKSKDGIALIVDKRISTKLL-EAESIEKIFKIDD 75
Query: 103 SLNII 107
+ +
Sbjct: 76 HIGAV 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ ++DGI L +KR++ + ++++++ H
Sbjct: 23 RLFQVHYAQEAVRRGATVMGLKSKDGIALIVDKRISTKLLEAESIEKIFKID------DH 76
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L DG L R
Sbjct: 77 IGAVASGLVADGRALVDRAR 96
>gi|298674555|ref|YP_003726305.1| proteasome endopeptidase complex subunit alpha [Methanohalobium
evestigatum Z-7303]
gi|298287543|gb|ADI73509.1| proteasome endopeptidase complex, alpha subunit [Methanohalobium
evestigatum Z-7303]
Length = 255
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T GI A+DG++L +KR T++L+ E + EKI+++
Sbjct: 17 FSPD-GRLFQVEYAREAVKRGTTAAGIKAKDGVVLLVDKRITSRLI-EAESIEKIFQIDA 74
Query: 103 SLNIIT 108
+ + T
Sbjct: 75 HIGVAT 80
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T GI A+DG++L +KR+ + +++Q++ +H
Sbjct: 22 RLFQVEYAREAVKRGTTAAGIKAKDGVVLLVDKRITSRLIEAESIEKIFQID------AH 75
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 76 IGVATSGLVADARTLVDRAR 95
>gi|201066706|gb|ACH92666.1| 20S proteasome subunit alpha 5 [Leishmania donovani]
Length = 244
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI +G++LAAEKR+ MS++ ME SH
Sbjct: 20 RIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLVVPSSMSKI------MEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
T + + D +L R
Sbjct: 74 IATVMSGMVADARILVEHAR 93
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++Q+EYA+EAI T LGI +G++LAAEKR + L+
Sbjct: 14 TFSPE-GRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLV 59
>gi|391340615|ref|XP_003744634.1| PREDICTED: proteasome subunit alpha type-5-like [Metaseiulus
occidentalis]
Length = 242
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G +LA EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLM-ESTTIEKIVEI 70
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI +G +LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVT 55
>gi|146086176|ref|XP_001465480.1| 20S proteasome subunit alpha 5, (putative) [Leishmania infantum
JPCM5]
gi|398015092|ref|XP_003860736.1| proteasome alpha 5 subunit, putative [Leishmania donovani]
gi|134069578|emb|CAM67901.1| 20S proteasome subunit alpha 5, (putative) [Leishmania infantum
JPCM5]
gi|322498958|emb|CBZ34031.1| proteasome alpha 5 subunit, putative [Leishmania donovani]
Length = 244
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI +G++LAAEKR+ MS++ ME SH
Sbjct: 20 RIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLVVPSSMSKI------MEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
T + + D +L R
Sbjct: 74 IATVMSGMVADARILVEHAR 93
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++Q+EYA+EAI T LGI +G++LAAEKR + L+
Sbjct: 14 TFSPE-GRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLV 59
>gi|312067265|ref|XP_003136661.1| 20S proteasome alpha5 subunit [Loa loa]
gi|307768173|gb|EFO27407.1| proteasome subunit alpha type-5 [Loa loa]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+EA+ T +GI +G++LAAEKR T+KL+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIRTTEGVILAAEKRATSKLM 59
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G++LAAEKR + ++ +V+ + A++
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIRTTEGVILAAEKRATSKLMVNDAIEKISKVDSHV-AVTF 78
Query: 63 AG 64
AG
Sbjct: 79 AG 80
>gi|147919678|ref|YP_686578.1| proteasome subunit alpha [Methanocella arvoryzae MRE50]
gi|110621974|emb|CAJ37252.1| 20S proteasome, alpha subunit [Methanocella arvoryzae MRE50]
Length = 254
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++DGI L +KR + KLL E + EKI+K+ D
Sbjct: 15 FSPD-GRLFQVHYAQEAVRRGATVMGLKSKDGIALLVDKRISTKLL-EAESIEKIFKIDD 72
Query: 103 SLNII 107
+ +
Sbjct: 73 HIGAV 77
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ ++DGI L +KR++ + ++++++ H
Sbjct: 20 RLFQVHYAQEAVRRGATVMGLKSKDGIALLVDKRISTKLLEAESIEKIFKID------DH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L DG L R
Sbjct: 74 IGAVASGLVADGRALVDRAR 93
>gi|159478278|ref|XP_001697231.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
gi|158274705|gb|EDP00486.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
Length = 241
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLL-EPSSIEKIMEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 EHM 74
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI ++G++LA EKR+
Sbjct: 20 RLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRIT 55
>gi|123416081|ref|XP_001304820.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121886298|gb|EAX91890.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 251
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 34/41 (82%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
R+ QVEYA+++I+ AGT +G+ +G++LAAEK+NT +L+D
Sbjct: 17 RILQVEYAIQSINQAGTAIGVQFTNGVVLAAEKKNTGRLVD 57
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ---DFSFLPHMSRL 50
R+ QVEYA+++I+ AGT +G+ +G++LAAEK+ D+ F M+++
Sbjct: 17 RILQVEYAIQSINQAGTAIGVQFTNGVVLAAEKKNTGRLVDYLFPEKMAKI 67
>gi|1907268|emb|CAA62960.1| proteasome subunit C9-like protein [Sus scrofa]
Length = 226
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 68 GILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
GILA DG+LLAAE+RN +KLLDE SEKIYKL++ +
Sbjct: 1 GILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDM 37
>gi|88603528|ref|YP_503706.1| proteasome subunit alpha [Methanospirillum hungatei JF-1]
gi|88188990|gb|ABD41987.1| Proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
Length = 239
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI Q+G++L +KR ++LL E + EKI+++ +
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKCQEGVVLIVDKRINSRLL-EANSIEKIFRIDE 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI Q+G++L +KR+N + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKCQEGVVLIVDKRINSRLLEANSIEKIFRID 72
>gi|124027453|ref|YP_001012773.1| proteasome subunit alpha [Hyperthermus butylicus DSM 5456]
gi|123978147|gb|ABM80428.1| proteasome alpha subunit [Hyperthermus butylicus DSM 5456]
Length = 243
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYAMEA T +G+ A+DG+++ AEK+ T+ L+D EK+Y + +
Sbjct: 19 FSPD-GRLFQVEYAMEAAKRGWTMVGVRARDGVVIVAEKKKTSPLIDI-EQLEKVYMVDE 76
Query: 103 SLN 105
+
Sbjct: 77 HIG 79
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYAMEA T +G+ A+DG+++ AEK+ + + ++Y V+
Sbjct: 23 GRLFQVEYAMEAAKRGWTMVGVRARDGVVIVAEKKKTSPLIDIEQLEKVYMVD------E 76
Query: 62 HAGTCLGILAQDGILL 77
H G DG +L
Sbjct: 77 HIGAGFVGFGSDGRVL 92
>gi|448627225|ref|ZP_21671838.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
gi|445759054|gb|EMA10341.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
Length = 258
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|145539217|ref|XP_001455303.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423102|emb|CAK87906.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +L+QVEYAMEA+ C+G+ +D I+L EK+ T+KL D T +K+Y+L
Sbjct: 10 FSPD-GQLFQVEYAMEAVKRGLCCVGVRGKDAIILGVEKKATSKLQDVKTI-KKVYQLDH 67
Query: 103 SL 104
+L
Sbjct: 68 NL 69
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
+L+QVEYAMEA+ C+G+ +D I+L EK+ + + ++YQ+++ + ++
Sbjct: 15 QLFQVEYAMEAVKRGLCCVGVRGKDAIILGVEKKATSKLQDVKTIKKVYQLDHNL-CMTF 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+G L D +LA + R
Sbjct: 74 SG-----LNADARILANQTR 88
>gi|345497874|ref|XP_001607430.2| PREDICTED: proteasome subunit alpha type-5-like [Nasonia
vitripennis]
Length = 269
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGWTAIGICTSEGVILAVEKRTTSFLM-EPTMVEKIVEVD 71
Query: 102 DSLNIIT 108
+ ++
Sbjct: 72 KHIGCVS 78
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL--PHMSRLYQVEYAMEAI 60
RL+QVEYA+EAI T +GI +G++LA EKR SFL P M VE +E
Sbjct: 20 RLFQVEYAIEAIKLGWTAIGICTSEGVILAVEKRTT---SFLMEPTM-----VEKIVEVD 71
Query: 61 SHAGTCL--GILAQDGILL 77
H G C+ G++A ++
Sbjct: 72 KHIG-CVSSGLMADSRTMI 89
>gi|344212046|ref|YP_004796366.1| proteasome subunit alpha [Haloarcula hispanica ATCC 33960]
gi|343783401|gb|AEM57378.1| proteasome subunit alpha [Haloarcula hispanica ATCC 33960]
Length = 258
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|224119566|ref|XP_002331192.1| predicted protein [Populus trichocarpa]
gi|222873313|gb|EEF10444.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKVMEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKVMEIDDH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|342182071|emb|CCC91550.1| putative proteasome alpha 3 subunit [Trypanosoma congolense IL3000]
Length = 286
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR------NTNKLLDEGTTSE 95
+F P RLYQVEYA EAIS AG+ +GIL G++L AE+ +T + D + E
Sbjct: 11 TFSPE-GRLYQVEYAEEAISQAGSVIGILTTGGVVLGAERGQQFSLFDTEIMEDRNISGE 69
Query: 96 KIYKL 100
K++K+
Sbjct: 70 KVFKI 74
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL 44
RLYQVEYA EAIS AG+ +GIL G++L AE+ Q FS
Sbjct: 17 RLYQVEYAEEAISQAGSVIGILTTGGVVLGAER--GQQFSLF 56
>gi|452207153|ref|YP_007487275.1| proteasome alpha subunit [Natronomonas moolapensis 8.8.11]
gi|452083253|emb|CCQ36539.1| proteasome alpha subunit [Natronomonas moolapensis 8.8.11]
Length = 249
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++L +KR + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTDDGVVLVVDKRIRSPLM-ERTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +GI DG++L +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGIRTDDGVVLVVDKRIRS-----PLMERT-SVEKIHKADD 74
Query: 62 HAGTC 66
H G
Sbjct: 75 HIGIA 79
>gi|55377980|ref|YP_135830.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
gi|448639279|ref|ZP_21676693.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
gi|448658429|ref|ZP_21682829.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
gi|59798452|sp|Q5V2X8.1|PSA1_HALMA RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S
proteasome alpha subunit 1; AltName: Full=Proteasome
core protein PsmA 1
gi|55230705|gb|AAV46124.1| proteasome alpha subunit [Haloarcula marismortui ATCC 43049]
gi|445761154|gb|EMA12403.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
gi|445762866|gb|EMA14078.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
Length = 260
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|448687948|ref|ZP_21693916.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
gi|445779739|gb|EMA30655.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|448305747|ref|ZP_21495676.1| proteasome subunit alpha [Natronorubrum sulfidifaciens JCM 14089]
gi|445588205|gb|ELY42451.1| proteasome subunit alpha [Natronorubrum sulfidifaciens JCM 14089]
Length = 251
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR ++LL E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRVPSELL-EDSSVEKIHKADN 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRV 56
>gi|448666445|ref|ZP_21685090.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
gi|445771576|gb|EMA22632.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
Length = 258
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HIGI 78
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|20090630|ref|NP_616705.1| proteasome subunit alpha [Methanosarcina acetivorans C2A]
gi|23821985|sp|Q8TPX5.1|PSA_METAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|19915673|gb|AAM05185.1| multicatalytic endopeptidase complex, subunit alpha [Methanosarcina
acetivorans C2A]
Length = 247
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +GI A DG++L +KR T++L+ E + EKI+++ +
Sbjct: 14 FSPD-GRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLV-EAESIEKIFQIDE 71
Query: 103 SLNIIT 108
+ T
Sbjct: 72 HIGAAT 77
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA EA+ T +GI A DG++L +KR+ + +++Q++
Sbjct: 19 RLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQID 70
>gi|448677563|ref|ZP_21688753.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
gi|445773238|gb|EMA24271.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
Length = 258
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRS-----PLMER-SSVEKIHKADD 74
Query: 62 HAG 64
H G
Sbjct: 75 HIG 77
>gi|242006680|ref|XP_002424175.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
gi|212507516|gb|EEB11437.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
Length = 242
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +G+ +G++LA EKR T+ L+ E +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITSPLM-EPSTIEKIVEI 70
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +G++LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITS-----PLMEP-STIEKIVEIDSH 73
Query: 63 AGTCL-GILAQDGILL 77
G + G++A I++
Sbjct: 74 IGCAVSGLMADSRIMI 89
>gi|333910829|ref|YP_004484562.1| proteasome subunit alpha [Methanotorris igneus Kol 5]
gi|333751418|gb|AEF96497.1| Proteasome subunit alpha [Methanotorris igneus Kol 5]
Length = 273
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI ++G++LA ++R T+ L+ E ++ EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAIGIKCKNGVVLAVDRRITSNLI-EISSIEKIFQIDD 73
Query: 103 SL 104
+
Sbjct: 74 HI 75
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI ++G++LA ++R+ + + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAIGIKCKNGVVLAVDRRITSNLIEISSIEKIFQID 72
>gi|195628706|gb|ACG36183.1| proteasome subunit alpha type 3 [Zea mays]
Length = 249
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V + + +
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSV-HRLSGLVV 78
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
AG LA DG + + ++ E + EK+Y
Sbjct: 79 AG-----LAADGRQIVSRAKS------EAASYEKVY 103
>gi|448362716|ref|ZP_21551320.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
gi|445647338|gb|ELZ00312.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
Length = 253
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLL-EDSSVEKIHKADN 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRV 56
>gi|448301364|ref|ZP_21491357.1| proteasome subunit alpha [Natronorubrum tibetense GA33]
gi|445584100|gb|ELY38424.1| proteasome subunit alpha [Natronorubrum tibetense GA33]
Length = 252
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +DG++LA +KR + LL E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTKDGVVLAVDKRVPSPLL-EDSSVEKIHKADN 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ +DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTKDGVVLAVDKRV 56
>gi|390939124|ref|YP_006402862.1| proteasome endopeptidase complex subunit alpha [Desulfurococcus
fermentans DSM 16532]
gi|390192231|gb|AFL67287.1| proteasome endopeptidase complex, alpha subunit [Desulfurococcus
fermentans DSM 16532]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ T +GI + ++AAEKR +L+DE +KI+K+ D
Sbjct: 16 FSPD-GRIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITQLIDEKAI-QKIFKIDD 73
Query: 103 SLN 105
+
Sbjct: 74 HIG 76
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R+YQVEYA EA+ T +GI + ++AAEKR + ++++++ H
Sbjct: 21 RIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITQLIDEKAIQKIFKID------DH 74
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL----LDEGTTSEKIYKL 100
G +A DG +L + N L DE E I KL
Sbjct: 75 IGASYAGMAGDGRILISYAINQALLHRFYYDEPAPVEYITKL 116
>gi|448410502|ref|ZP_21575207.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
gi|445671538|gb|ELZ24125.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
Length = 255
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRIRS-----PLMER-SSVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 IGIA 79
>gi|218884638|ref|YP_002429020.1| proteasome subunit alpha [Desulfurococcus kamchatkensis 1221n]
gi|218766254|gb|ACL11653.1| proteasome subunit alpha [Desulfurococcus kamchatkensis 1221n]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ T +GI + ++AAEKR +L+DE +KI+K+ D
Sbjct: 16 FSPD-GRIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITQLIDEKAI-QKIFKIDD 73
Query: 103 SLN 105
+
Sbjct: 74 HIG 76
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R+YQVEYA EA+ T +GI + ++AAEKR + ++++++ H
Sbjct: 21 RIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITQLIDEKAIQKIFKID------DH 74
Query: 63 AGTCLGILAQDGILL 77
G +A DG +L
Sbjct: 75 IGASYAGMAGDGRIL 89
>gi|116778764|gb|ABK20984.1| unknown [Picea sitchensis]
Length = 237
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYAMEAI T +G+ + GI+LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAMEAIKLGSTAVGLKTKRGIILAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAMEAI T +G+ + GI+LA EKR+ P VE ME H
Sbjct: 20 RLFQVEYAMEAIKLGSTAVGLKTKRGIILAVEKRITSPL-LEPS-----SVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 VGCAMSGLIADARTLVEHAR 93
>gi|354545285|emb|CCE42012.1| hypothetical protein CPAR2_805610 [Candida parapsilosis]
Length = 265
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DG++LA EK +N R+ V+ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGVVLAVEKIINSKLLVPGKNKRIQTVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
G L DG + N+ DE + + IYK+
Sbjct: 74 IGVVYSGLLPDG------RHFVNRSRDEAQSFKSIYKI 105
>gi|85116600|ref|XP_965087.1| proteasome component C1 [Neurospora crassa OR74A]
gi|28926889|gb|EAA35851.1| proteasome component C1 [Neurospora crassa OR74A]
gi|38567096|emb|CAE76392.1| probable 20S proteasome subunit C1 [Neurospora crassa]
gi|336464939|gb|EGO53179.1| hypothetical protein NEUTE1DRAFT_119104 [Neurospora tetrasperma
FGSC 2508]
gi|350297045|gb|EGZ78022.1| putative 20S proteasome subunit C1 [Neurospora tetrasperma FGSC
2509]
Length = 297
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYAM+A+ + T +GI +DGI+LAAEK T+KLL +G +++I +
Sbjct: 15 FSPD-GRNFQVEYAMKAVENGSTSIGIRCKDGIVLAAEKVITSKLLKQG-ANKRIATVDR 72
Query: 103 SLNII 107
L I+
Sbjct: 73 HLGIV 77
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYAM+A+ + T +GI +DGI+LAAEK
Sbjct: 19 GRNFQVEYAMKAVENGSTSIGIRCKDGIVLAAEK 52
>gi|226496753|ref|NP_001152346.1| proteasome subunit alpha type 3 [Zea mays]
gi|195655367|gb|ACG47151.1| proteasome subunit alpha type 3 [Zea mays]
Length = 249
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + ++ E + EK+Y
Sbjct: 74 SGLVVAGLAADGRQIVSRAKS------EAASYEKVY 103
>gi|448399830|ref|ZP_21571063.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
gi|445668283|gb|ELZ20913.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA +R ++ L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGLRTPDGVVLAANRRVSSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LAA +R++ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASVGLRTPDGVVLAANRRVSS-----PLMER-SSVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 VGVA 79
>gi|115440617|ref|NP_001044588.1| Os01g0811100 [Oryza sativa Japonica Group]
gi|12229919|sp|Q9LSU0.1|PSA3_ORYSJ RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
proteasome alpha subunit G; AltName: Full=20S proteasome
subunit alpha-7
gi|8671500|dbj|BAA96833.1| alpha 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|55297486|dbj|BAD68202.1| putative proteasome subunit alpha type 3 [Oryza sativa Japonica
Group]
gi|55297673|dbj|BAD68244.1| putative proteasome subunit alpha type 3 [Oryza sativa Japonica
Group]
gi|113534119|dbj|BAF06502.1| Os01g0811100 [Oryza sativa Japonica Group]
gi|215737208|dbj|BAG96137.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189257|gb|EEC71684.1| hypothetical protein OsI_04163 [Oryza sativa Indica Group]
gi|222619429|gb|EEE55561.1| hypothetical protein OsJ_03826 [Oryza sativa Japonica Group]
Length = 249
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V + H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHW------H 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG ++ ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADG------RQIVSRAKSEAASYEKVY 103
>gi|298714366|emb|CBJ27423.1| proteasome subunit alpha [Ectocarpus siliculosus]
Length = 239
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLL-EPSSVEKIMEV 70
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI ++G++LA EKRL P VE ME SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPL-LEPS-----SVEKIMEVDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGAAMSGLIADARTLVDHAR 93
>gi|31211921|ref|XP_314945.1| AGAP008816-PA [Anopheles gambiae str. PEST]
gi|30176407|gb|EAA10150.2| AGAP008816-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI DG+++A EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKFGSTAIGISTPDGVVMAVEKRITSSLI-EPSKMEKIVEV 70
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI DG+++A EKR+ M ++ +V+
Sbjct: 20 RLFQVEYAIEAIKFGSTAIGISTPDGVVMAVEKRITSSLIEPSKMEKIVEVD 71
>gi|448309569|ref|ZP_21499426.1| proteasome subunit alpha, partial [Natronorubrum bangense JCM
10635]
gi|445589693|gb|ELY43919.1| proteasome subunit alpha, partial [Natronorubrum bangense JCM
10635]
Length = 139
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR ++LL E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRVPSELL-EDSSVEKIHKADN 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HIGI 78
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRV 56
>gi|313126204|ref|YP_004036474.1| 20S proteasome subunit alpha or beta [Halogeometricum borinquense
DSM 11551]
gi|448286045|ref|ZP_21477281.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
gi|312292569|gb|ADQ67029.1| 20S proteasome subunit (alpha or beta) [Halogeometricum borinquense
DSM 11551]
gi|445575344|gb|ELY29820.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
Length = 247
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R+YQVEYA EA+ +GI DG++L A++R ++ L+ E + EKI+KL
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPSVGIRTADGVVLGAQRRTSSSLM-EAESIEKIHKL 71
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
R+YQVEYA EA+ +GI DG++L A++R +
Sbjct: 21 RIYQVEYAREAVKRGAPSVGIRTADGVVLGAQRRTS 56
>gi|71412055|ref|XP_808230.1| proteasome alpha 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70872393|gb|EAN86379.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
Length = 245
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI D +++AAEKR+ M+++ +++Y H
Sbjct: 20 RIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDY------H 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
GT L + D +L R
Sbjct: 74 MGTVLSGMVADARILVEHAR 93
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
+F P R++Q+EYA+EAI T LGI D +++AAEKR + L+D +
Sbjct: 14 TFSPE-GRIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSS 63
>gi|407837276|gb|EKF99704.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
Length = 245
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI D +++AAEKR+ M+++ +++Y H
Sbjct: 20 RIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDY------H 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
GT L + D +L R
Sbjct: 74 MGTVLSGMVADARILVEHAR 93
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
+F P R++Q+EYA+EAI T LGI D +++AAEKR + L+D +
Sbjct: 14 TFSPE-GRIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSS 63
>gi|282165300|ref|YP_003357685.1| proteasome alpha subunit [Methanocella paludicola SANAE]
gi|282157614|dbj|BAI62702.1| proteasome alpha subunit [Methanocella paludicola SANAE]
Length = 256
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ ++DGI + +KR + KLL E + EKI+K+ D
Sbjct: 18 FSPD-GRLFQVHYAQEAVRRGATVMGLKSKDGIAMIVDKRISTKLL-EAESIEKIFKIDD 75
Query: 103 SLNII 107
+ +
Sbjct: 76 HIGAV 80
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ ++DGI + +KR++ + ++++++ H
Sbjct: 23 RLFQVHYAQEAVRRGATVMGLKSKDGIAMIVDKRISTKLLEAESIEKIFKID------DH 76
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L DG L + R
Sbjct: 77 IGAVASGLVADGRALVDKAR 96
>gi|414880043|tpg|DAA57174.1| TPA: hypothetical protein ZEAMMB73_721003 [Zea mays]
Length = 292
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG ++ ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADG------RQIVSRTKSEAASYEKVY 103
>gi|328768571|gb|EGF78617.1| hypothetical protein BATDEDRAFT_30413 [Batrachochytrium
dendrobatidis JAM81]
Length = 243
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ LL E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAVEKRVTSPLL-ESSSIEKVMEID 71
Query: 102 DSL 104
L
Sbjct: 72 SHL 74
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ P + +E ME SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGIQTSEGVVLAVEKRVTS-----PLLES-SSIEKVMEIDSH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 LGCAMSGLIAD 84
>gi|300711230|ref|YP_003737044.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
gi|448296668|ref|ZP_21486722.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
gi|299124913|gb|ADJ15252.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
gi|445580961|gb|ELY35327.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
Length = 255
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI + G++LA +KR + L+ E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGIRTEGGVVLAVDKRIRSPLM-ERTSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RLYQVEYA EA+ +GI + G++LA +KR+ P M R VE +A
Sbjct: 21 GRLYQVEYAREAVKRGTASIGIRTEGGVVLAVDKRIRS-----PLMERT-SVEKIHKADD 74
Query: 62 HAG-TCLGILAQDGILLAAEKRN--TNKL 87
H G G +A L+ +RN N+L
Sbjct: 75 HIGIASAGHVADARQLIDFARRNAQVNRL 103
>gi|448729831|ref|ZP_21712143.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
gi|445794152|gb|EMA44705.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
Length = 249
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRFRSP-LEERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LA +KR F + VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKR------FRSPLEERSSVEKIHKADDH 75
Query: 63 AG 64
G
Sbjct: 76 IG 77
>gi|312137045|ref|YP_004004382.1| proteasome endopeptidase complex subunit alpha [Methanothermus
fervidus DSM 2088]
gi|311224764|gb|ADP77620.1| proteasome endopeptidase complex, alpha subunit [Methanothermus
fervidus DSM 2088]
Length = 251
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LG+ +++GI+L +KR T++L+ E + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTSLGVKSKEGIVLLVDKRPTSRLV-EPKSIEKIFQIDE 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T LG+ +++GI+L +KR + +++Q++ H
Sbjct: 21 RLFQVEYAREAVKRGTTSLGVKSKEGIVLLVDKRPTSRLVEPKSIEKIFQID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D ++ + R
Sbjct: 75 IGAATSGLVADARVIIEKAR 94
>gi|440789932|gb|ELR11223.1| proteasome subunit alpha type5, putative [Acanthamoeba castellanii
str. Neff]
Length = 253
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVILAVEKRLTSPLL-EPSSVEKIMEI 70
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKRL P VE ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVILAVEKRLTSPL-LEPS-----SVEKIMEIDAH 73
Query: 63 AGTCLGILAQDGILL----AAEKRNTNKLLDEGTTSE 95
G + L D L E +N DE + E
Sbjct: 74 IGAAMSGLTGDAKTLIDYARVEAQNHTFTFDEPMSVE 110
>gi|126179622|ref|YP_001047587.1| proteasome subunit alpha [Methanoculleus marisnigri JR1]
gi|166199287|sp|A3CW55.1|PSA_METMJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|125862416|gb|ABN57605.1| Proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
Length = 240
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +G++L +KR T++LL E + EKI+K+
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLL-EPVSIEKIFKIDA 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +G++L +KR+ + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKID 72
>gi|226495745|ref|NP_001150029.1| LOC100283656 [Zea mays]
gi|195636202|gb|ACG37569.1| proteasome subunit alpha type 3 [Zea mays]
Length = 249
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG ++ ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADG------RQIVSRTKSEAASYEKVY 103
>gi|448622741|ref|ZP_21669390.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
gi|445753249|gb|EMA04666.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
Length = 249
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|261201274|ref|XP_002627037.1| proteasome component C1 [Ajellomyces dermatitidis SLH14081]
gi|239592096|gb|EEQ74677.1| proteasome component C1 [Ajellomyces dermatitidis SLH14081]
gi|239611741|gb|EEQ88728.1| proteasome component C1 [Ajellomyces dermatitidis ER-3]
gi|327358202|gb|EGE87059.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
Length = 297
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I+ +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIFTVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HIGIVS 78
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + R++ V+
Sbjct: 19 GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIITSKLLKPGANKRIFTVD------R 72
Query: 62 HAGTCLGILAQDGILLAAEKRN 83
H G L DG + R+
Sbjct: 73 HIGIVSSGLLPDGRHFVSRARD 94
>gi|224031643|gb|ACN34897.1| unknown [Zea mays]
gi|414880044|tpg|DAA57175.1| TPA: proteasome subunit alpha type [Zea mays]
Length = 249
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG ++ ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADG------RQIVSRTKSEAASYEKVY 103
>gi|261403706|ref|YP_003247930.1| proteasome subunit alpha [Methanocaldococcus vulcanius M7]
gi|261370699|gb|ACX73448.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
vulcanius M7]
Length = 257
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +DG++LA ++R T+KL+ + + EKI+++ +
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAVGITCKDGVVLAVDRRITSKLV-KIRSIEKIFQIDE 73
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI +DG++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAVGITCKDGVVLAVDRRITSKLVKIRSIEKIFQID 72
>gi|240104096|ref|YP_002960405.1| proteasome subunit alpha [Thermococcus gammatolerans EJ3]
gi|259535085|sp|C5A2C2.1|PSA_THEGJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|239911650|gb|ACS34541.1| Peptidase T1A, 20S proteasome alpha-subunit (psmA) [Thermococcus
gammatolerans EJ3]
Length = 260
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ + G++LA EKR T++L+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLI-EPSSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ + G++LA EKR+ +++Q++ H
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQID------DH 75
Query: 63 -AGTCLGILAQDGILL 77
A GI+A +L+
Sbjct: 76 IAAAPSGIIADARVLV 91
>gi|91080807|ref|XP_969972.1| PREDICTED: similar to proteasome alpha 3 subunit [Tribolium
castaneum]
gi|270005897|gb|EFA02345.1| hypothetical protein TcasGA2_TC008015 [Tribolium castaneum]
Length = 254
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT 93
F P R++QVEYAM+A+ ++GT +G+ +DG++LAAEK +KL + GT
Sbjct: 15 FSPD-GRVFQVEYAMKAVENSGTVIGLRGKDGVVLAAEKLVMSKLHEPGTN 64
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 29/33 (87%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYAM+A+ ++GT +G+ +DG++LAAEK
Sbjct: 20 RVFQVEYAMKAVENSGTVIGLRGKDGVVLAAEK 52
>gi|257076107|ref|ZP_05570468.1| proteasome subunit alpha [Ferroplasma acidarmanus fer1]
Length = 229
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LGI +DG+LL +EK+ ++L+ E + EKI + D
Sbjct: 10 FSPD-GRLFQVEYAREAVKKGSTALGIKFKDGVLLLSEKKARSRLV-EKNSLEKIQLVDD 67
Query: 103 SLNIIT 108
++ +T
Sbjct: 68 NVATVT 73
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEYA EA+ T LGI +DG+LL +EK+
Sbjct: 15 RLFQVEYAREAVKKGSTALGIKFKDGVLLLSEKK 48
>gi|383859405|ref|XP_003705185.1| PREDICTED: proteasome subunit alpha type-5-like [Megachile
rotundata]
Length = 269
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++L EKR T+ L+ E TT EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSALM-EPTTLEKIVEI 70
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEYA+EAI T +GI +G++L EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRI 54
>gi|292657036|ref|YP_003536933.1| Proteasome subunit alpha [Haloferax volcanii DS2]
gi|448293636|ref|ZP_21483740.1| proteasome subunit alpha [Haloferax volcanii DS2]
gi|12229945|sp|Q9V2V5.1|PSA2_HALVD RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S
proteasome alpha subunit 2; AltName: Full=Proteasome
core protein PsmA 2
gi|5833208|gb|AAD53405.1|AF126261_1 alpha-2 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370566|gb|ADE02793.1| Proteasome alpha subunit [Haloferax volcanii DS2]
gi|445569967|gb|ELY24534.1| proteasome subunit alpha [Haloferax volcanii DS2]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|327310393|ref|YP_004337290.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
gi|326946872|gb|AEA11978.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
Length = 239
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +LYQVEYA EA+ +G+ G++LAAEKR ++L D ++ EKIY + D
Sbjct: 16 FSPE-GKLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKRKISQLFDP-SSLEKIYIVDD 73
Query: 103 SLNI 106
+ I
Sbjct: 74 HVAI 77
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
+LYQVEYA EA+ +G+ G++LAAEKR
Sbjct: 21 KLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKR 54
>gi|71420529|ref|XP_811519.1| proteasome alpha 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|18152451|emb|CAC82813.1| proteasome subunit alpha5 [Trypanosoma cruzi]
gi|70876190|gb|EAN89668.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
Length = 245
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI D +++AAEKR+ M+++ +++Y H
Sbjct: 20 RIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDY------H 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
GT L + D +L R
Sbjct: 74 MGTVLSGMVADARILVEHAR 93
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
+F P R++Q+EYA+EAI T LGI D +++AAEKR + L+D +
Sbjct: 14 TFSPE-GRIFQIEYAIEAIKLGSTSLGIQTPDAVVIAAEKRVPSVLVDPSS 63
>gi|448602439|ref|ZP_21656495.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
gi|445747954|gb|ELZ99408.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|414887867|tpg|DAA63881.1| TPA: hypothetical protein ZEAMMB73_943597 [Zea mays]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDG 74
+G + LA DG
Sbjct: 74 SGLAVAGLAADG 85
>gi|448564996|ref|ZP_21636049.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|448583026|ref|ZP_21646495.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
gi|445716250|gb|ELZ67999.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|445729983|gb|ELZ81575.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
Length = 248
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|448546479|ref|ZP_21626643.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|448548639|ref|ZP_21627736.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
gi|448557942|ref|ZP_21632853.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
gi|445702932|gb|ELZ54872.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|445713830|gb|ELZ65604.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
gi|445714044|gb|ELZ65812.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|50551999|ref|XP_503474.1| YALI0E02794p [Yarrowia lipolytica]
gi|49649343|emb|CAG79053.1| YALI0E02794p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +DG++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATKDGVVLGVEKRITSSLL-EASSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +G+ +DG++L EKR+ S L S +E +E H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATKDGVVLGVEKRITS--SLLEASS----IEKIVEIDKH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLTAD 84
>gi|226528124|ref|NP_001149468.1| proteasome subunit alpha type 3 [Zea mays]
gi|194703092|gb|ACF85630.1| unknown [Zea mays]
gi|195625734|gb|ACG34697.1| proteasome subunit alpha type 3 [Zea mays]
gi|195627414|gb|ACG35537.1| proteasome subunit alpha type 3 [Zea mays]
gi|414887868|tpg|DAA63882.1| TPA: proteasome subunit alpha type isoform 1 [Zea mays]
gi|414887869|tpg|DAA63883.1| TPA: proteasome subunit alpha type isoform 2 [Zea mays]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADGRQIVSRTKS------EAASYEKVY 103
>gi|448601054|ref|ZP_21656337.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
gi|445734657|gb|ELZ86215.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|448310317|ref|ZP_21500162.1| proteasome subunit alpha [Natronolimnobius innermongolicus JCM
12255]
gi|445608261|gb|ELY62117.1| proteasome subunit alpha [Natronolimnobius innermongolicus JCM
12255]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + LL E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRVPSPLL-EDSSVEKIHKADN 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RLYQVEYA EA+ +G+ DG++LA +KR+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRV 56
>gi|433419469|ref|ZP_20405267.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|448568072|ref|ZP_21637680.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
gi|432199432|gb|ELK55607.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|445727534|gb|ELZ79145.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ LG+ DG++LAA + ++L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+L T
Sbjct: 74 ALGAAT 79
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ LG+ DG++LAA + + + +L++++ A+ A +
Sbjct: 21 RIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAAT 79
>gi|344299587|gb|EGW29940.1| hypothetical protein SPAPADRAFT_63567 [Spathaspora passalidarum
NRRL Y-27907]
Length = 259
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DG++LA EK +N R+ V+ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGVVLAVEKIINSKLLVPGKNKRIQTVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + N+ DE + + IYK
Sbjct: 74 IGVVYSGLLPDG------RHFVNRARDEAQSFKSIYK 104
>gi|402077154|gb|EJT72503.1| proteasome component C1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 292
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ +AGT +GI +DGI+LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENAGTSVGIRCKDGIVLAVEKVVTSKLLKPG 62
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ +AGT +GI +DGI+LA EK
Sbjct: 19 GRNFQVEYAVKAVENAGTSVGIRCKDGIVLAVEK 52
>gi|293331913|ref|NP_001169594.1| uncharacterized protein LOC100383475 [Zea mays]
gi|195657431|gb|ACG48183.1| proteasome subunit alpha type 3 [Zea mays]
gi|224030269|gb|ACN34210.1| unknown [Zea mays]
gi|414591027|tpg|DAA41598.1| TPA: proteasome subunit alpha type [Zea mays]
Length = 249
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEG-SNRRIHSVH 71
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADGRQIVSRTKS------EAASYEKVY 103
>gi|374636055|ref|ZP_09707639.1| proteasome endopeptidase complex, alpha subunit [Methanotorris
formicicus Mc-S-70]
gi|373560313|gb|EHP86580.1| proteasome endopeptidase complex, alpha subunit [Methanotorris
formicicus Mc-S-70]
Length = 272
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI + G++LA ++R T+ L+ E ++ EKI+++ D
Sbjct: 16 FSPE-GRLYQVEYAREAVRRGTTAIGIKCKSGVVLAVDRRITSSLI-EISSIEKIFQIDD 73
Query: 103 SL 104
+
Sbjct: 74 HI 75
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +GI + G++LA ++R+ + + +++Q++
Sbjct: 21 RLYQVEYAREAVRRGTTAIGIKCKSGVVLAVDRRITSSLIEISSIEKIFQID 72
>gi|195027251|ref|XP_001986497.1| GH21393 [Drosophila grimshawi]
gi|193902497|gb|EDW01364.1| GH21393 [Drosophila grimshawi]
Length = 245
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI D ++LA EKR T+ L+ T EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPLMVPKTV-EKIVKVD 71
Query: 102 DSLNIIT 108
+ + T
Sbjct: 72 EHIGCAT 78
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI D ++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPLMVPKTVEKIVKVD 71
>gi|443689760|gb|ELT92077.1| hypothetical protein CAPTEDRAFT_162763 [Capitella teleta]
Length = 241
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +GI+LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGIILAVEKRVTSSLI-EPSSIEKIMEV 70
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +GI+LA EKR+ S + S +E ME SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGIILAVEKRVTS--SLIEPSS----IEKIMEVDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADSRTLIDKAR 93
>gi|344233318|gb|EGV65191.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
gi|344233319|gb|EGV65192.1| hypothetical protein CANTEDRAFT_113714 [Candida tenuis ATCC 10573]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DGI+LA EK +N R+ ++ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGIVLAVEKIINSKLLVPGKNKRIQTID------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG L + R DE + + IYK
Sbjct: 74 IGVAYSGLLPDGRHLVSRGR------DEAKSFKSIYK 104
>gi|170588333|ref|XP_001898928.1| 20S proteasome alpha5 subunit [Brugia malayi]
gi|158593141|gb|EDP31736.1| 20S proteasome alpha5 subunit, putative [Brugia malayi]
Length = 248
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EA+ T +GI +G++LAAEKR T+KL+ EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAVKLGSTSIGIRTIEGVILAAEKRATSKLMVNDAI-EKISKV 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI +G++LAAEKR + ++ +V+ + A++
Sbjct: 20 RLFQVEYAIEAVKLGSTSIGIRTIEGVILAAEKRATSKLMVNDAIEKISKVDSHV-AVTF 78
Query: 63 AG 64
AG
Sbjct: 79 AG 80
>gi|389852860|ref|YP_006355094.1| proteasome subunit alpha [Pyrococcus sp. ST04]
gi|388250166|gb|AFK23019.1| proteasome subunit alpha [Pyrococcus sp. ST04]
Length = 261
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +G++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLI-EPESYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +G++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|294495468|ref|YP_003541961.1| proteasome endopeptidase complex, subunit alpha [Methanohalophilus
mahii DSM 5219]
gi|292666467|gb|ADE36316.1| proteasome endopeptidase complex, alpha subunit [Methanohalophilus
mahii DSM 5219]
Length = 256
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA EA+ T GI A+DG++L +KR T+ L+ E + EKI+++ +
Sbjct: 16 FSPD-GRIFQVEYAREAVKRGTTAAGIKARDGVVLLVDKRITSHLI-EAESIEKIFQIDE 73
Query: 103 SLNIIT 108
+ + T
Sbjct: 74 HIGVAT 79
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA EA+ T GI A+DG++L +KR+ + +++Q++ H
Sbjct: 21 RIFQVEYAREAVKRGTTAAGIKARDGVVLLVDKRITSHLIEAESIEKIFQID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 75 IGVATSGLVADARALVDRAR 94
>gi|435852003|ref|YP_007313589.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662633|gb|AGB50059.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 261
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T GI A++G++L +KR T++L+ E + EKI+++
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAAGIKAKEGVVLLVDKRITSRLI-EAESIEKIFQIDS 73
Query: 103 SLNIIT 108
+ + T
Sbjct: 74 HIGVAT 79
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T GI A++G++L +KR+ + +++Q++ SH
Sbjct: 21 RLFQVEYAREAVKRGTTAAGIKAKEGVVLLVDKRITSRLIEAESIEKIFQID------SH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 75 IGVATSGLVADARSLVDRAR 94
>gi|395645193|ref|ZP_10433053.1| proteasome endopeptidase complex, alpha subunit [Methanofollis
liminatans DSM 4140]
gi|395441933|gb|EJG06690.1| proteasome endopeptidase complex, alpha subunit [Methanofollis
liminatans DSM 4140]
Length = 248
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI +G++L +KR +++LL E + EKIY++ +
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGIKCSEGVILLVDKRVSSRLL-EPASIEKIYQIDE 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ T +GI +G++L +KR++ + ++YQ++ H
Sbjct: 21 RLYQVEYAREAVKRGTTAVGIKCSEGVILLVDKRVSSRLLEPASIEKIYQID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D LL R
Sbjct: 75 IGVASSGLVGDARLLVDRAR 94
>gi|332157782|ref|YP_004423061.1| proteasome subunit alpha [Pyrococcus sp. NA2]
gi|331033245|gb|AEC51057.1| proteasome subunit alpha [Pyrococcus sp. NA2]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +G++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLI-EPESYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +G++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|54696300|gb|AAV38522.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
Length = 241
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI A T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLASTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI A T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLASTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|242054733|ref|XP_002456512.1| hypothetical protein SORBIDRAFT_03g037640 [Sorghum bicolor]
gi|241928487|gb|EES01632.1| hypothetical protein SORBIDRAFT_03g037640 [Sorghum bicolor]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMILEG-SNRRIHSVH 71
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V + H
Sbjct: 20 RVFQVEYATKAVDNSGTIVGIKCKDGIVLGVEKLVTSKMILEGSNRRIHSVHH------H 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + ++ E + EK+Y
Sbjct: 74 SGLAVAGLAADGRQIVSRTKS------EAASYEKVY 103
>gi|14591336|ref|NP_143414.1| proteasome subunit alpha [Pyrococcus horikoshii OT3]
gi|6685785|sp|O59219.1|PSA_PYRHO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|3257982|dbj|BAA30665.1| 260aa long hypothetical proteasome, alpha subunit [Pyrococcus
horikoshii OT3]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +G++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLI-EPESYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +G++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|291243435|ref|XP_002741602.1| PREDICTED: proteasome alpha 5 subunit-like [Saccoglossus
kowalevskii]
Length = 241
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+++A EKR T+ L+ E T+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIKTSEGVVIAVEKRITSSLM-EPTSIEKIVEV 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G+++A EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIKTSEGVVIAVEKRITSSLMEPTSIEKIVEVD 71
>gi|401421925|ref|XP_003875451.1| 20S proteasome subunit alpha 5, (putative) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491688|emb|CBZ26961.1| 20S proteasome subunit alpha 5, (putative) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 244
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI +G++LAAEKR+ MS++ ME SH
Sbjct: 20 RIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLVIPSSMSKI------MEVDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ + D +L R
Sbjct: 74 IAAVMSGMVADARILVEHAR 93
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++Q+EYA+EAI T LGI +G++LAAEKR + L+
Sbjct: 14 TFSPE-GRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLV 59
>gi|448734628|ref|ZP_21716850.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
gi|445799696|gb|EMA50066.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
Length = 249
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
++ S RLYQVEYA EA+ +G+ DG++LA +KR + L+E ++ EKI
Sbjct: 11 DRGVSIWSPDGRLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRFRSP-LEERSSVEKI 69
Query: 98 YKLHDSLNIIT 108
+K D + I +
Sbjct: 70 HKADDHIGIAS 80
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ +G+ DG++LA +KR + ++++ +
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRFRSPLEERSSVEKIHKAD 73
>gi|410671924|ref|YP_006924295.1| proteasome subunit alpha [Methanolobus psychrophilus R15]
gi|409171052|gb|AFV24927.1| proteasome subunit alpha [Methanolobus psychrophilus R15]
Length = 262
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T G+ A DG++L +KR T++L+ E + EKI+++ +
Sbjct: 16 FSPD-GRLFQVEYAREAVKRGTTAAGVKANDGVVLLVDKRITSRLI-EAESIEKIFQIDN 73
Query: 103 SLNIIT 108
+ T
Sbjct: 74 HIGAAT 79
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA EA+ T G+ A DG++L +KR+ + +++Q++ +H
Sbjct: 21 RLFQVEYAREAVKRGTTAAGVKANDGVVLLVDKRITSRLIEAESIEKIFQID------NH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 75 IGAATSGLVADARALVDRAR 94
>gi|297742930|emb|CBI35797.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 70 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 127
Query: 102 D 102
+
Sbjct: 128 E 128
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ P VE ME H
Sbjct: 76 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPL-LEPS-----SVEKIMEIDEH 129
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 130 IGCAMSGLIADARTLVEHAR 149
>gi|223477873|ref|YP_002582203.1| proteasome subunit alpha [Thermococcus sp. AM4]
gi|214033099|gb|EEB73927.1| Proteasome subunit alpha archaeal [Thermococcus sp. AM4]
Length = 260
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ G++LA EKR T++L+ E ++ EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKWNGGVVLAVEKRITSRLI-EPSSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QV YA EA+ T +G+ G++LA EKR+ +++Q++
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKWNGGVVLAVEKRITSRLIEPSSYEKIFQID 73
>gi|159486557|ref|XP_001701305.1| 20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
gi|158271788|gb|EDO97600.1| 20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
Length = 235
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P +L Q+EYA+ A++ T LGI A DG+++A EK+ + L+DE TT +KI +
Sbjct: 12 TFSPS-GKLVQIEYALNAVAAGATSLGISATDGVVIATEKKLPSALVDE-TTVQKIMTIT 69
Query: 102 DSLNII 107
+ ++
Sbjct: 70 PQIGVV 75
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
+L Q+EYA+ A++ T LGI A DG+++A EK+L
Sbjct: 18 KLVQIEYALNAVAAGATSLGISATDGVVIATEKKL 52
>gi|242786362|ref|XP_002480789.1| proteasome subunit alpha type 3, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720936|gb|EED20355.1| proteasome subunit alpha type 3, putative [Talaromyces stipitatus
ATCC 10500]
Length = 294
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKLITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ + +S
Sbjct: 19 GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKLITSKLLKPGANKRIATVDRNIGIVS 78
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
L DG + R DE + K YK
Sbjct: 79 AG------LVPDGRHFVSRAR------DEAASWRKTYK 104
>gi|167526395|ref|XP_001747531.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773977|gb|EDQ87611.1| predicted protein [Monosiga brevicollis MX1]
Length = 248
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P R++QVEYA+EAI T +GI ++G+++A EKR T+ L+D + EKI ++
Sbjct: 14 TFSPE-GRIFQVEYAIEAIKLGSTAIGIQTKEGVIIAVEKRITSPLMDPSSI-EKIVEI 70
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA+EAI T +GI ++G+++A EKR+ P M +E +E SH
Sbjct: 20 RIFQVEYAIEAIKLGSTAIGIQTKEGVIIAVEKRITS-----PLMDP-SSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ L D L R
Sbjct: 74 IACAMSGLTADARTLIERAR 93
>gi|337283871|ref|YP_004623345.1| proteasome subunit alpha [Pyrococcus yayanosii CH1]
gi|334899805|gb|AEH24073.1| proteasome subunit alpha [Pyrococcus yayanosii CH1]
Length = 277
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T G+ ++G++LA EKR T++L+ E + EKI+++ D
Sbjct: 34 FSPD-GRLFQVNYAREAVKRGATAAGVKCEEGVVLAVEKRITSRLI-EPESYEKIFQIDD 91
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T G+ ++G++LA EKR+ +++Q++ + A S
Sbjct: 39 RLFQVNYAREAVKRGATAAGVKCEEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASS 98
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 99 -----GIIADARVLV 108
>gi|300120539|emb|CBK20093.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R++QVEYA +A++ A TCLG++ +DG+++A+EK L+ F ++Q+ ++
Sbjct: 10 GRIFQVEYASKAVADAPTCLGVICKDGVVIASEKTLDSPFVMEGSDKHIHQISQSI---- 65
Query: 62 HAGTCLGILAQDG 74
G +G + DG
Sbjct: 66 --GAGIGGYSPDG 76
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA +A++ A TCLG++ +DG+++A+EK + + EG + + I+++
Sbjct: 6 FSPE-GRIFQVEYASKAVADAPTCLGVICKDGVVIASEKTLDSPFVMEG-SDKHIHQISQ 63
Query: 103 SLN 105
S+
Sbjct: 64 SIG 66
>gi|449018712|dbj|BAM82114.1| 20S core proteasome subunit alpha 5 [Cyanidioschyzon merolae strain
10D]
Length = 273
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI DG++LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSTAVGIQCADGVVLAVEKRVTSPLI-EPRSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +GI DG++LA EKR+
Sbjct: 20 RLFQVEYALEAIKLGSTAVGIQCADGVVLAVEKRVT 55
>gi|354612218|ref|ZP_09030170.1| Proteasome subunit alpha [Halobacterium sp. DL1]
gi|353191796|gb|EHB57302.1| Proteasome subunit alpha [Halobacterium sp. DL1]
Length = 242
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++L +KR + LL EG++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTAEGVVLLVDKRTRSPLL-EGSSVEKLHKVDD 74
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ +G+ +G++L +KR + +L++V+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTAEGVVLLVDKRTRSPLLEGSSVEKLHKVD 73
>gi|212543333|ref|XP_002151821.1| proteasome subunit alpha type 3, putative [Talaromyces marneffei
ATCC 18224]
gi|210066728|gb|EEA20821.1| proteasome subunit alpha type 3, putative [Talaromyces marneffei
ATCC 18224]
Length = 292
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKLITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NVGIVS 78
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ + +S
Sbjct: 19 GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKLITSKLLKPGANKRIATVDRNVGIVS 78
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
L DG + R DE + K YK
Sbjct: 79 SG------LVPDGRHFVSRAR------DEAASWRKTYK 104
>gi|225441985|ref|XP_002265563.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Vitis
vinifera]
gi|359482854|ref|XP_003632854.1| PREDICTED: proteasome subunit alpha type-5 [Vitis vinifera]
gi|147791356|emb|CAN66160.1| hypothetical protein VITISV_007438 [Vitis vinifera]
Length = 237
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|340056627|emb|CCC50963.1| proteasome alpha 5 subunit, putatitive [Trypanosoma vivax Y486]
Length = 246
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI D +L+AAEKRL M+++ +V++ H
Sbjct: 20 RIFQIEYAIEAIKLGSTSLGIQTPDAVLIAAEKRLPSSLVDPASMNKILEVDH------H 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L + D +L R
Sbjct: 74 IGVVLSGMVADARILVEHAR 93
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++Q+EYA+EAI T LGI D +L+AAEKR + L+D + + KI ++
Sbjct: 14 TFSPE-GRIFQIEYAIEAIKLGSTSLGIQTPDAVLIAAEKRLPSSLVDPASMN-KILEVD 71
Query: 102 DSLNII 107
+ ++
Sbjct: 72 HHIGVV 77
>gi|218193366|gb|EEC75793.1| hypothetical protein OsI_12722 [Oryza sativa Indica Group]
Length = 65
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+EAI T +G+ +DG++LA EKR T+ LL
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL 59
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +G+ +DG++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVT 55
>gi|351721357|ref|NP_001235159.1| proteasome subunit alpha type-5 [Glycine max]
gi|12229923|sp|Q9M4T8.1|PSA5_SOYBN RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|7839485|gb|AAF70292.1|AF255338_1 20S proteasome subunit [Glycine max]
Length = 237
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|392568056|gb|EIW61230.1| 20S proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 247
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+LA EK ++ + R+Y V+ H
Sbjct: 20 RIFQVEYANKAVENSGTAVGIRVKDGIVLAVEKLVHSKLLIPENNKRIYTVD------KH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNII 107
G DG LA N+ DE ++ + Y+ +L +
Sbjct: 74 IGIASAGYLADGRHLA------NRARDEASSYRENYRAAPTLQYV 112
>gi|385303008|gb|EIF47110.1| proteasome subunit alpha type-6 [Dekkera bruxellensis AWRI1499]
Length = 142
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AI+ A TCLG++ +D + ++K+ +KLLD + + I+K+
Sbjct: 14 FSPE-GRLYQVEYAFKAINSANITCLGVVGEDSSVFVSQKKIPDKLLDPASITY-IFKIS 71
Query: 102 DSLNII 107
S+ ++
Sbjct: 72 PSIGML 77
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRL 37
RLYQVEYA +AI+ A TCLG++ +D + ++K++
Sbjct: 19 RLYQVEYAFKAINSANITCLGVVGEDSSVFVSQKKI 54
>gi|14601414|ref|NP_147951.1| proteasome subunit alpha [Aeropyrum pernix K1]
gi|6685800|sp|Q9YC01.1|PSA_AERPE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|5105133|dbj|BAA80447.1| proteasome alpha subunit [Aeropyrum pernix K1]
Length = 258
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 50 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNI 106
LYQV YA EA+ T LGI +G+++AAEKR L+D +KIYK+ D + +
Sbjct: 25 LYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDI-DKIYKIDDHIGV 80
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV YA EA+ T LGI +G+++AAEKR + + ++Y+++ H
Sbjct: 25 LYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKID------DHI 78
Query: 64 GTCLGILAQDGILL 77
G + DG +L
Sbjct: 79 GVAFAGMGGDGRIL 92
>gi|449455403|ref|XP_004145442.1| PREDICTED: proteasome subunit alpha type-5-like [Cucumis sativus]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADAHTLVEHAR 93
>gi|351726355|ref|NP_001235588.1| uncharacterized protein LOC100499756 [Glycine max]
gi|255626321|gb|ACU13505.1| unknown [Glycine max]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|449531037|ref|XP_004172494.1| PREDICTED: proteasome subunit alpha type-5-like [Cucumis sativus]
Length = 151
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 DSLN 105
+ +
Sbjct: 72 EHIG 75
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADAHTLVEHAR 93
>gi|359806124|ref|NP_001241191.1| uncharacterized protein LOC100799919 [Glycine max]
gi|255641541|gb|ACU21044.1| unknown [Glycine max]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|241952593|ref|XP_002419018.1| alpha subunit of the 20S core complex of the 26S proteasome,
putative; proteasome component, putative [Candida
dubliniensis CD36]
gi|223642358|emb|CAX42600.1| alpha subunit of the 20S core complex of the 26S proteasome,
putative [Candida dubliniensis CD36]
Length = 247
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AI+ A T LGI QD ++ ++K+ +KLLD T S I+K+
Sbjct: 14 FSPE-GRLYQVEYAFKAINSANITSLGITGQDSAVIISQKKIPDKLLDPKTVS-YIFKIT 71
Query: 102 DSLNII 107
S+ ++
Sbjct: 72 PSIGMV 77
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRL 37
RLYQVEYA +AI+ A T LGI QD ++ ++K++
Sbjct: 19 RLYQVEYAFKAINSANITSLGITGQDSAVIISQKKI 54
>gi|68476400|ref|XP_717661.1| hypothetical protein CaO19.12833 [Candida albicans SC5314]
gi|46439381|gb|EAK98699.1| hypothetical protein CaO19.12833 [Candida albicans SC5314]
Length = 247
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AI+ A T LGI QD ++ ++K+ +KLLD T S I+K+
Sbjct: 14 FSPE-GRLYQVEYAFKAINSANITSLGITGQDSAVIISQKKIPDKLLDPKTVS-YIFKIT 71
Query: 102 DSLNII 107
S+ ++
Sbjct: 72 PSIGMV 77
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRL 37
RLYQVEYA +AI+ A T LGI QD ++ ++K++
Sbjct: 19 RLYQVEYAFKAINSANITSLGITGQDSAVIISQKKI 54
>gi|154343830|ref|XP_001567859.1| putative proteasome alpha 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065193|emb|CAM40619.1| putative proteasome alpha 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 244
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI +G++LAAEKR+ + MS++ ME SH
Sbjct: 20 RIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSNLVISSSMSKI------MEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ + D +L R
Sbjct: 74 IAAVMSGMVADARILVEHAR 93
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++Q+EYA+EAI T LGI +G++LAAEKR + L+
Sbjct: 14 TFSPE-GRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSNLV 59
>gi|16943777|emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella patens]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
++ F+ RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E T+ EKI
Sbjct: 9 DRGFNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLL-EPTSVEKI 67
Query: 98 YKLHDSL 104
++ + +
Sbjct: 68 MEIDEHI 74
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ S L + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRIT---SVLLEPT---SVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLTADARTLVEHGR 93
>gi|326501362|dbj|BAJ98912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508742|dbj|BAJ95893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G++ + G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLMTKYGVVLAVEKRVTSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G++ + G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLMTKYGVVLAVEKRVTSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 VGCAMSGLIADARTLVEHAR 93
>gi|284165547|ref|YP_003403826.1| proteasome endopeptidase complex subunit alpha [Haloterrigena
turkmenica DSM 5511]
gi|284015202|gb|ADB61153.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
turkmenica DSM 5511]
Length = 249
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI DG++LAA+++ ++ L+ E ++ EKI+K +
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGIRTPDGVVLAADRQVSSSLM-EPSSVEKIHKADN 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RLYQVEYA EA+ +GI DG++LAA+++++
Sbjct: 22 RLYQVEYAREAVKRGTASVGIRTPDGVVLAADRQVS 57
>gi|255647525|gb|ACU24226.1| unknown [Glycine max]
Length = 237
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|320101502|ref|YP_004177094.1| proteasome endopeptidase complex subunit alpha [Desulfurococcus
mucosus DSM 2162]
gi|319753854|gb|ADV65612.1| proteasome endopeptidase complex, alpha subunit [Desulfurococcus
mucosus DSM 2162]
Length = 246
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ T +GI + ++AAEKR L+DE +KI+K+ D
Sbjct: 16 FSPD-GRIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITPLVDEKAI-QKIFKIDD 73
Query: 103 SLN 105
+
Sbjct: 74 HVG 76
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R+YQVEYA EA+ T +GI + ++AAEKR + ++++++ H
Sbjct: 21 RIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITPLVDEKAIQKIFKID------DH 74
Query: 63 AGTCLGILAQDGILL 77
G +A DG +L
Sbjct: 75 VGASYAGMAGDGRIL 89
>gi|68476211|ref|XP_717755.1| hypothetical protein CaO19.5378 [Candida albicans SC5314]
gi|46439482|gb|EAK98799.1| hypothetical protein CaO19.5378 [Candida albicans SC5314]
gi|238880513|gb|EEQ44151.1| proteasome component C7-alpha [Candida albicans WO-1]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AI+ A T LGI QD ++ ++K+ +KLLD T S I+K+
Sbjct: 14 FSPE-GRLYQVEYAFKAINSANITSLGITGQDSAVIISQKKIPDKLLDPKTVS-YIFKIT 71
Query: 102 DSLNII 107
S+ ++
Sbjct: 72 PSIGMV 77
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRL 37
RLYQVEYA +AI+ A T LGI QD ++ ++K++
Sbjct: 19 RLYQVEYAFKAINSANITSLGITGQDSAVIISQKKI 54
>gi|18977943|ref|NP_579300.1| proteasome subunit alpha [Pyrococcus furiosus DSM 3638]
gi|397652064|ref|YP_006492645.1| proteasome subunit alpha [Pyrococcus furiosus COM1]
gi|23821988|sp|Q8U0L6.1|PSA_PYRFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|18893713|gb|AAL81695.1| proteasome, subunit alpha (multicatalytic endopeptidase complex
alpha subunit) [Pyrococcus furiosus DSM 3638]
gi|393189655|gb|AFN04353.1| proteasome subunit alpha [Pyrococcus furiosus COM1]
Length = 260
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QV YA EA+ T +G+ +G++LA EKR T++L+ E + EKI+++ D
Sbjct: 17 FSPD-GRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLI-EPDSYEKIFQIDD 74
Query: 103 SL 104
+
Sbjct: 75 HI 76
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QV YA EA+ T +G+ +G++LA EKR+ +++Q++ + A S
Sbjct: 22 RLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASS 81
Query: 63 AGTCLGILAQDGILL 77
GI+A +L+
Sbjct: 82 -----GIIADARVLV 91
>gi|255647791|gb|ACU24356.1| unknown [Glycine max]
Length = 227
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|257053863|ref|YP_003131696.1| proteasome subunit alpha [Halorhabdus utahensis DSM 12940]
gi|256692626|gb|ACV12963.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
Length = 271
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LA +KR + L+ E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRIRSPLM-ERDSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LA +KR+ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRIRS-----PLMER-DSVEKIHKADDH 75
Query: 63 AG 64
G
Sbjct: 76 IG 77
>gi|332376360|gb|AEE63320.1| unknown [Dendroctonus ponderosae]
Length = 254
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R++QVEYAM+A+ ++GT +G+ DGI+LAAEK +K L E TT+++++ +
Sbjct: 15 FSPD-GRVFQVEYAMKAVENSGTVIGLKGSDGIVLAAEKLILSK-LHERTTNQRLFNI 70
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYAM+A+ ++GT +G+ DGI+LAAEK
Sbjct: 20 RVFQVEYAMKAVENSGTVIGLKGSDGIVLAAEK 52
>gi|409083904|gb|EKM84261.1| hypothetical protein AGABI1DRAFT_110820 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201040|gb|EKV50963.1| hypothetical protein AGABI2DRAFT_189272 [Agaricus bisporus var.
bisporus H97]
Length = 242
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI DG++L EKR + LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTTVGIKTPDGVILGVEKRVQSPLL-EASSIEKIMEID 71
Query: 102 DSL 104
+ L
Sbjct: 72 NHL 74
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI DG++L EKR+ S L S +E ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGIKTPDGVILGVEKRVQ---SPLLEAS---SIEKIMEIDNH 73
Query: 63 AGTCLGILAQDGILLAAEKRNT 84
G + L D + R T
Sbjct: 74 LGCAMSGLTADARTMIDHARVT 95
>gi|345004091|ref|YP_004806944.1| proteasome endopeptidase complex subunit alpha [halophilic archaeon
DL31]
gi|344319717|gb|AEN04571.1| proteasome endopeptidase complex, alpha subunit [halophilic
archaeon DL31]
Length = 268
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +GI +G++L A+KR +K++ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTPSVGIRTPEGVVLGADKRRRSKMM-EPDSVEKLHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGMAS 80
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +GI +G++L A+KR
Sbjct: 21 GRLYQVEYAREAVKRGTPSVGIRTPEGVVLGADKR 55
>gi|224071019|ref|XP_002303332.1| predicted protein [Populus trichocarpa]
gi|118485571|gb|ABK94637.1| unknown [Populus trichocarpa]
gi|222840764|gb|EEE78311.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKVMEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 ECI 74
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+EAI T +G+ ++G++LA EKR+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRIT 55
>gi|168024139|ref|XP_001764594.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684172|gb|EDQ70576.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E T+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLL-EPTSVEKIMEID 71
Query: 102 DSL 104
+ +
Sbjct: 72 EHI 74
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ S L + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRIT---SVLLEPT---SVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLTADARTLVEHGR 93
>gi|48477876|ref|YP_023582.1| proteasome subunit alpha [Picrophilus torridus DSM 9790]
gi|59798286|sp|Q6L0W3.1|PSA_PICTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|48430524|gb|AAT43389.1| proteasome alpha subunit [Picrophilus torridus DSM 9790]
Length = 234
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T LGI +DG+ L +EK+ ++L+ E T+ EKI + D
Sbjct: 15 FSPD-GRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLV-EKTSLEKIQLIDD 72
Query: 103 SLNIIT 108
+ +T
Sbjct: 73 RVAAVT 78
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA EA+ T LGI +DG+ L +EK++
Sbjct: 20 RLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVR 55
>gi|19075540|ref|NP_588040.1| 20S proteasome component alpha 7, Pre10 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|12229898|sp|O59770.1|PSA7_SCHPO RecName: Full=Probable proteasome subunit alpha type-7
gi|3080509|emb|CAA18639.1| 20S proteasome component alpha 7, Pre10 (predicted)
[Schizosaccharomyces pombe]
Length = 253
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
F RL+Q EYA +A+ +A TC+GI +DG++LA EK T+KLL
Sbjct: 13 FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLL 58
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RL+Q EYA +A+ +A TC+GI +DG++LA EK
Sbjct: 19 RLFQAEYAYKAVENASTCIGIKCEDGVILALEK 51
>gi|397779934|ref|YP_006544407.1| proteasome alpha subunit [Methanoculleus bourgensis MS2]
gi|396938436|emb|CCJ35691.1| proteasome alpha subunit [Methanoculleus bourgensis MS2]
Length = 240
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +G+ +G++L +KR T++LL E + EKI+K+
Sbjct: 16 FSPD-GRLYQVEYAREAVKRGTTAVGLKCSEGVVLIVDKRVTSRLL-EPVSIEKIFKIDT 73
Query: 103 SLNI 106
+ +
Sbjct: 74 HIGV 77
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ T +G+ +G++L +KR+ + ++++++
Sbjct: 21 RLYQVEYAREAVKRGTTAVGLKCSEGVVLIVDKRVTSRLLEPVSIEKIFKID 72
>gi|121709868|ref|XP_001272550.1| proteasome subunit alpha type 3, putative [Aspergillus clavatus
NRRL 1]
gi|119400700|gb|EAW11124.1| proteasome subunit alpha type 3, putative [Aspergillus clavatus
NRRL 1]
Length = 298
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G + KI +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIVTSKLLKPG-ANRKIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSR-LYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + P +R + V+
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIVTSKL-LKPGANRKIATVD------R 72
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
H G L DG + R DE ++ +YK
Sbjct: 73 HVGIVSAGLVPDGRHFVSRAR------DEASSWRNVYK 104
>gi|145501633|ref|XP_001436797.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403941|emb|CAK69400.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
R+YQVEYA +A+ ++ T +G+ +DG++LA EK+ ++LL E T+++IY +
Sbjct: 18 RIYQVEYATKAVENSETVIGVKCKDGVILAGEKQKFSRLL-EDNTNKRIYNI 68
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL 44
R+YQVEYA +A+ ++ T +G+ +DG++LA EK Q FS L
Sbjct: 18 RIYQVEYATKAVENSETVIGVKCKDGVILAGEK---QKFSRL 56
>gi|145503751|ref|XP_001437849.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405007|emb|CAK70452.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
R+YQVEYA +A+ ++ T +G+ +DG++LA EK+ ++LL E T+++IY +
Sbjct: 18 RIYQVEYATKAVENSETVIGVKCKDGVILAGEKQKFSRLL-EDNTNKRIYNI 68
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFL 44
R+YQVEYA +A+ ++ T +G+ +DG++LA EK Q FS L
Sbjct: 18 RIYQVEYATKAVENSETVIGVKCKDGVILAGEK---QKFSRL 56
>gi|356534412|ref|XP_003535749.1| PREDICTED: proteasome subunit alpha type-5-like [Glycine max]
Length = 236
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|195382805|ref|XP_002050119.1| GJ20367 [Drosophila virilis]
gi|194144916|gb|EDW61312.1| GJ20367 [Drosophila virilis]
Length = 245
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI D ++LA EKR T+ ++ T EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPMMVPKTV-EKIVKVD 71
Query: 102 DSLNIIT 108
+ + T
Sbjct: 72 EHIGCAT 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI D ++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPMMVPKTVEKIVKVD 71
>gi|387914854|gb|AFK11036.1| proteasome subunit alpha type-5 [Callorhinchus milii]
gi|392879026|gb|AFM88345.1| proteasome subunit alpha type-5 [Callorhinchus milii]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|388491684|gb|AFK33908.1| unknown [Lotus japonicus]
Length = 237
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEI 70
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|352682024|ref|YP_004892548.1| proteasome subunit alpha [Thermoproteus tenax Kra 1]
gi|350274823|emb|CCC81469.1| proteasome, subunit alpha [Thermoproteus tenax Kra 1]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +LYQVEYA EA+ +G+ G++LAAEKR ++L D ++ EKIY + D
Sbjct: 16 FSPE-GKLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKRKISQLFDP-SSLEKIYIIDD 73
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
+LYQVEYA EA+ +G+ G++LAAEKR
Sbjct: 21 KLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKR 54
>gi|336477106|ref|YP_004616247.1| proteasome endopeptidase complex subunit alpha [Methanosalsum
zhilinae DSM 4017]
gi|335930487|gb|AEH61028.1| proteasome endopeptidase complex, alpha subunit [Methanosalsum
zhilinae DSM 4017]
Length = 267
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA EA+ T GI +DG+ L +KR T+KL+ E + EKI+++ +
Sbjct: 16 FSPD-GRIFQVEYAREAVKRGTTAAGIKYRDGVALLVDKRITSKLI-EAESIEKIFQIDE 73
Query: 103 SLNIIT 108
+ + T
Sbjct: 74 HIGVAT 79
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA EA+ T GI +DG+ L +KR+ + +++Q++ H
Sbjct: 21 RIFQVEYAREAVKRGTTAAGIKYRDGVALLVDKRITSKLIEAESIEKIFQID------EH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L + R
Sbjct: 75 IGVATSGLVADARALVDKAR 94
>gi|168022987|ref|XP_001764020.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684759|gb|EDQ71159.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E T+ EKI ++
Sbjct: 10 TFSPE-GRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLL-EPTSVEKIMEID 67
Query: 102 DSL 104
+ +
Sbjct: 68 EHI 70
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ S L + VE ME H
Sbjct: 16 RLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRIT---SVLLEPT---SVEKIMEIDEH 69
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 70 IGCAMSGLTADARTLVEHGR 89
>gi|255719244|ref|XP_002555902.1| KLTH0H00528p [Lachancea thermotolerans]
gi|238941868|emb|CAR30040.1| KLTH0H00528p [Lachancea thermotolerans CBS 6340]
Length = 261
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL EG + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSPLL-EGDSIEKIVEIE 71
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +G+ +G++L EKR+ + ++ ++E H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSPLLEGDSIEKIVEIE------RH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGCAMSGLTAD 84
>gi|255584432|ref|XP_002532947.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223527276|gb|EEF29431.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKVMEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ P VE ME H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPL-LEPS-----SVEKVMEIDEH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|354611209|ref|ZP_09029165.1| Proteasome subunit alpha [Halobacterium sp. DL1]
gi|353196029|gb|EHB61531.1| Proteasome subunit alpha [Halobacterium sp. DL1]
Length = 266
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++L +KR ++ L++E T+ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTPSIGVRTAEGVVLLVDKRISSDLMEE-TSVEKIHKADD 74
Query: 103 SLNI 106
+ I
Sbjct: 75 HIGI 78
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDF 41
RLYQVEYA EA+ +G+ +G++L +KR++ D
Sbjct: 22 RLYQVEYAREAVKRGTPSIGVRTAEGVVLLVDKRISSDL 60
>gi|448537971|ref|XP_003871426.1| Pre10 alpha7 (C8) subunit of the 20S proteasome [Candida
orthopsilosis Co 90-125]
gi|380355783|emb|CCG25301.1| Pre10 alpha7 (C8) subunit of the 20S proteasome [Candida
orthopsilosis]
Length = 263
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DG++LA EK +N R+ V+ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGVVLAVEKIVNSKLLVPGKNKRIQTVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
G L DG + N+ DE + + I+K+
Sbjct: 74 IGVVYSGLLPDG------RHFVNRSRDEAQSFKSIFKI 105
>gi|385803838|ref|YP_005840238.1| proteasome subunit alpha [Haloquadratum walsbyi C23]
gi|339729330|emb|CCC40575.1| proteasome alpha subunit [Haloquadratum walsbyi C23]
Length = 247
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA++ LGI +G+++AA++R ++ L+ E + EK++KL +
Sbjct: 16 FSPD-GRIYQVEYAREAVNRGAPSLGIRTTNGVVIAAQRRTSSSLM-EAESIEKLHKLDE 73
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA++ LGI +G+++AA++R + + +L++++ + A S
Sbjct: 21 RIYQVEYAREAVNRGAPSLGIRTTNGVVIAAQRRTSSSLMEAESIEKLHKLDEYIGAAS 79
>gi|353236410|emb|CCA68405.1| probable PUP2-20S proteasome subunit (alpha5) [Piriformospora
indica DSM 11827]
Length = 251
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI DG++L EKR + LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTTVGIRTPDGVILGVEKRVPSPLL-ESSSVEKIMEI 70
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI DG++L EKR+ L S VE ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGIRTPDGVILGVEKRVPS--PLLESSS----VEKIMEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNK 86
G + L D + R T++
Sbjct: 74 IGCAMSGLTADARTMIDHARVTSQ 97
>gi|433590820|ref|YP_007280316.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|448331774|ref|ZP_21521025.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
gi|448385293|ref|ZP_21563799.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
gi|433305600|gb|AGB31412.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|445628733|gb|ELY82036.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
gi|445656788|gb|ELZ09620.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
Length = 246
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA ++ ++ L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRTPDGVVLAANRQISSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LAA ++++ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRTPDGVVLAANRQISS-----PLMER-SSVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 VGVA 79
>gi|313217255|emb|CBY38396.1| unnamed protein product [Oikopleura dioica]
Length = 149
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
SF P RL+QVEYA+EAI T +GI ++G +LA EKR T+ L+ T+ EKI+++
Sbjct: 14 SFSPE-GRLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLIVP-TSIEKIFEV 70
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI ++G +LA EKR+ + ++++V+ H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLIVPTSIEKIFEVD------KH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGCAMSGLIAD 84
>gi|126138826|ref|XP_001385936.1| hypothetical protein PICST_61383 [Scheffersomyces stipitis CBS
6054]
gi|126093214|gb|ABN67907.1| proteasome component YC1, partial [Scheffersomyces stipitis CBS
6054]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DGI+LA EK +N R+ ++ H
Sbjct: 16 RNFQVEYAMKAVENGGTSIGIKCKDGIVLAVEKIINSKLLVPGKNKRIQTID------RH 69
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + N+ DE + + IYK
Sbjct: 70 IGVVYSGLLPDG------RHFVNRGRDEAQSFKSIYK 100
>gi|388509786|gb|AFK42959.1| unknown [Lotus japonicus]
Length = 237
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +G+ ++G++LA EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGPTAIGLKTKEGVVLAVEKRITSPLL-EPSSVEKIMEI 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ + VE ME +H
Sbjct: 20 RLFQVEYAIEAIKLGPTAIGLKTKEGVVLAVEKRITSP------LLEPSSVEKIMEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADARTLVEHAR 93
>gi|300120523|emb|CBK20077.2| unnamed protein product [Blastocystis hominis]
Length = 602
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+E+I T +GI ++GI+LA EKRL + ++ ++++ H
Sbjct: 215 RLFQVEYAIESIKLGSTAIGINTKEGIVLAVEKRLTSKLIVPSSVIKIMEIDH------H 268
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L DGI L R
Sbjct: 269 IGAAMSGLVADGITLIDNAR 288
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
RL+QVEYA+E+I T +GI ++GI+LA EKR T+KL+
Sbjct: 215 RLFQVEYAIESIKLGSTAIGINTKEGIVLAVEKRLTSKLI 254
>gi|169602124|ref|XP_001794484.1| hypothetical protein SNOG_03940 [Phaeosphaeria nodorum SN15]
gi|160706088|gb|EAT89145.2| hypothetical protein SNOG_03940 [Phaeosphaeria nodorum SN15]
Length = 291
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 17 FSPD-GRNFQVEYAVKAVENGGTAVGIRCKDGVVLALEKLVTSKLLKPG-ANKRIATVDR 74
Query: 103 SLNIIT 108
++ I++
Sbjct: 75 NMGIVS 80
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 22 RNFQVEYAVKAVENGGTAVGIRCKDGVVLALEK 54
>gi|145542682|ref|XP_001457028.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424842|emb|CAK89631.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +L+QVEYAMEA+ C+G+ +D I+L EK+ T+KL + T +K+Y+L +
Sbjct: 10 FSPD-GQLFQVEYAMEAVKRGLCCVGVRGKDVIVLGVEKKATSKLQNVKTI-KKVYQLDN 67
Query: 103 SL 104
+L
Sbjct: 68 NL 69
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
+L+QVEYAMEA+ C+G+ +D I+L EK+ + + ++YQ++
Sbjct: 15 QLFQVEYAMEAVKRGLCCVGVRGKDVIVLGVEKKATSKLQNVKTIKKVYQLD 66
>gi|38048537|gb|AAR10171.1| similar to Drosophila melanogaster ProsMA5, partial [Drosophila
yakuba]
Length = 185
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVS-STVEKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVSSTVEKIVEVD 71
>gi|303280147|ref|XP_003059366.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459202|gb|EEH56498.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 235
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 33 AEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
A+ R N + L Q+++A+ A+ T LGI A +G++LA EK+ L+DE T
Sbjct: 2 ADSRSNYSLTTFNSSGELVQIKHALAAVGAGATSLGIRATNGVVLATEKKLPTTLVDE-T 60
Query: 93 TSEKIYKLHDSLNI 106
T EKI +L D + I
Sbjct: 61 TVEKIAQLTDEIGI 74
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
L Q+++A+ A+ T LGI A +G++LA EK+L
Sbjct: 19 LVQIKHALAAVGAGATSLGIRATNGVVLATEKKL 52
>gi|15789479|ref|NP_279303.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|169235195|ref|YP_001688395.1| proteasome subunit alpha [Halobacterium salinarum R1]
gi|12644553|sp|P57697.1|PSA_HALSA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|229598014|sp|B0R2T2.1|PSA_HALS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|10579815|gb|AAG18783.1| proteasome, subunit beta [Halobacterium sp. NRC-1]
gi|167726261|emb|CAP13042.1| proteasome alpha subunit [Halobacterium salinarum R1]
Length = 253
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ +G++L +K+ + LL EG++ EK++K+ D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLL-EGSSVEKLHKIDD 74
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ +G++L +K+
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQ 55
>gi|56754539|gb|AAW25457.1| SJCHGC09091 protein [Schistosoma japonicum]
gi|226470010|emb|CAX70286.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
gi|226489092|emb|CAX74895.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
gi|226489094|emb|CAX74896.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
Length = 235
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P +L Q+EYA++A+ +GI A +G++LAA K+ T+KL+DE T S KI ++
Sbjct: 11 TFSPS-GKLVQIEYALKAVESGAPSVGIRAANGVVLAAVKKFTSKLMDESTVS-KIEQIT 68
Query: 102 DSLNII 107
+ + ++
Sbjct: 69 NGIGMV 74
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQV 53
+L Q+EYA++A+ +GI A +G++LAA K+ +S++ Q+
Sbjct: 17 KLVQIEYALKAVESGAPSVGIRAANGVVLAAVKKFTSKLMDESTVSKIEQI 67
>gi|70606428|ref|YP_255298.1| proteasome subunit alpha [Sulfolobus acidocaldarius DSM 639]
gi|449066640|ref|YP_007433722.1| proteasome subunit alpha [Sulfolobus acidocaldarius N8]
gi|449068914|ref|YP_007435995.1| proteasome subunit alpha [Sulfolobus acidocaldarius Ron12/I]
gi|76363302|sp|Q4JB24.1|PSA_SULAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|68567076|gb|AAY80005.1| proteasome alpha subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035148|gb|AGE70574.1| proteasome subunit alpha [Sulfolobus acidocaldarius N8]
gi|449037422|gb|AGE72847.1| proteasome subunit alpha [Sulfolobus acidocaldarius Ron12/I]
Length = 242
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD-EGTTSEKIYKLH 101
F P S LYQV+YA EA+ T LG+ + G++L AEKR +LLD +G EKI+ L
Sbjct: 17 FSPDGS-LYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGI--EKIFMLD 73
Query: 102 D 102
D
Sbjct: 74 D 74
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV+YA EA+ T LG+ + G++L AEKR + + +++ ++ H
Sbjct: 23 LYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLD------DHV 76
Query: 64 GTCLGILAQDGILLAAEKRN 83
G LA DG +L R+
Sbjct: 77 GCTFAGLASDGRILIDYARS 96
>gi|302413898|ref|XP_003004781.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
gi|261355850|gb|EEY18278.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
Length = 243
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ DG++L EKR T+ LL E ++ EKI ++
Sbjct: 12 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATADGVILGVEKRVTSTLL-ETSSVEKIVEI 68
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ DG++L EKR+
Sbjct: 18 RLFQVEYSLEAIKLGSTAIGVATADGVILGVEKRVT 53
>gi|448352854|ref|ZP_21541635.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
gi|445642133|gb|ELY95204.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
Length = 273
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA EA+ +G++ +GI+LAA KR + LL+ SE I K+H
Sbjct: 18 FSPD-GRLYQVEYAREAVERGSPSVGVVTDNGIVLAARKRLRSPLLE----SESIAKIH 71
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RLYQVEYA EA+ +G++ +GI+LAA KRL ++++++V+
Sbjct: 23 RLYQVEYAREAVERGSPSVGVVTDNGIVLAARKRLRSPLLESESIAKIHRVD 74
>gi|342879829|gb|EGU81063.1| hypothetical protein FOXB_08411 [Fusarium oxysporum Fo5176]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI A+DG++LA EK ++KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRAKDGVVLAIEKVVSSKLLKPG 62
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI A+DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVENGGTSIGIRAKDGVVLAIEK 52
>gi|195584184|ref|XP_002081894.1| GD11263 [Drosophila simulans]
gi|194193903|gb|EDX07479.1| GD11263 [Drosophila simulans]
Length = 244
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTV-EKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
>gi|452847802|gb|EME49734.1| hypothetical protein DOTSEDRAFT_68493 [Dothistroma septosporum
NZE10]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
+F P +L Q+EYA+ A++ T LGI A +GI+LA EK+++ L+D G++S+
Sbjct: 11 TFSPS-GKLVQIEYALNAVNQGVTSLGIKAANGIVLATEKKSSTPLIDAGSSSK 63
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
+L Q+EYA+ A++ T LGI A +GI+LA EK+
Sbjct: 17 KLVQIEYALNAVNQGVTSLGIKAANGIVLATEKK 50
>gi|347524278|ref|YP_004781848.1| proteasome endopeptidase complex subunit alpha [Pyrolobus fumarii
1A]
gi|343461160|gb|AEM39596.1| proteasome endopeptidase complex, alpha subunit [Pyrolobus fumarii
1A]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+QVEYA EA+ T +G+ ++G++L AEKR T L D EKI K+ +
Sbjct: 19 FSPD-GRLFQVEYAFEAVRRGWTAIGVRVKEGVVLVAEKRRTAPLADM-EQMEKIMKIDE 76
Query: 103 SLN 105
+
Sbjct: 77 HIG 79
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
RL+QVEYA EA+ T +G+ ++G++L AEKR + + M ++ +++
Sbjct: 23 GRLFQVEYAFEAVRRGWTAIGVRVKEGVVLVAEKRRTAPLADMEQMEKIMKID------E 76
Query: 62 HAGTCLGILAQDGILL 77
H G L DG +L
Sbjct: 77 HIGASSVGLGGDGRIL 92
>gi|195335201|ref|XP_002034263.1| GM21770 [Drosophila sechellia]
gi|194126233|gb|EDW48276.1| GM21770 [Drosophila sechellia]
Length = 244
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLMVPSTV-EKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
>gi|156379569|ref|XP_001631529.1| predicted protein [Nematostella vectensis]
gi|156218571|gb|EDO39466.1| predicted protein [Nematostella vectensis]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+++A EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVVVAVEKRITSPLM-ESSSVEKIVEI 70
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+++A EKR+ P M VE +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVVVAVEKRITS-----PLMES-SSVEKIVEIDSH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLIAD 84
>gi|401413456|ref|XP_003886175.1| Alpha 2 subunit of 20S proteasome (ISS), related [Neospora caninum
Liverpool]
gi|325120595|emb|CBZ56149.1| Alpha 2 subunit of 20S proteasome (ISS), related [Neospora caninum
Liverpool]
Length = 258
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+ AI T +GI +DG++LA+E+R T+ LLD + +KI ++
Sbjct: 14 TFSPE-GRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLDHQSI-QKIVEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+ AI T +GI +DG++LA+E+R+
Sbjct: 20 RLFQVEYALGAIKLGSTAVGIQTKDGVILASERRIT 55
>gi|313238191|emb|CBY13285.1| unnamed protein product [Oikopleura dioica]
Length = 162
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
SF P RL+QVEYA+EAI T +GI ++G +LA EKR T+ L+ T+ EKI+++
Sbjct: 14 SFSPE-GRLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLIVP-TSIEKIFEV 70
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI ++G +LA EKR+ + ++++V+ H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLIVPTSIEKIFEVD------KH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGCAMSGLIAD 84
>gi|294658445|ref|XP_460784.2| DEHA2F09724p [Debaryomyces hansenii CBS767]
gi|202953136|emb|CAG89125.2| DEHA2F09724p [Debaryomyces hansenii CBS767]
Length = 259
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DGI+LA EK +N R+ ++ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGIVLAVEKIINSKLLVPGKNKRIQTID------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + N+ DE + IYK
Sbjct: 74 IGVAYSGLLPDG------RHFVNRGRDEAQNFKNIYK 104
>gi|452824079|gb|EME31084.1| 20S proteasome subunit alpha 5 [Galdieria sulphuraria]
Length = 252
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYAMEAI T +GI +G++LA EKR ++ LL E + EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAMEAIKLGSTAVGIQTAEGVVLAVEKRLSSPLL-EPNSVEKLVEID 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAMEAI T +GI +G++LA EKRL+ P+ VE +E H
Sbjct: 20 RLFQVEYAMEAIKLGSTAVGIQTAEGVVLAVEKRLSSPL-LEPN-----SVEKLVEIDEH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGCAMSGLVAD 84
>gi|336272686|ref|XP_003351099.1| hypothetical protein SMAC_05977 [Sordaria macrospora k-hell]
gi|380093658|emb|CCC08622.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 298
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + T +GI +DGI+LAAEK T+KLL +G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGSTSIGIRCKDGIVLAAEKVITSKLLKQG-ANKRIATVDR 72
Query: 103 SLNII 107
L I+
Sbjct: 73 HLGIV 77
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + T +GI +DGI+LAAEK
Sbjct: 19 GRNFQVEYAVKAVENGSTSIGIRCKDGIVLAAEK 52
>gi|195488764|ref|XP_002092452.1| ProsMA5 [Drosophila yakuba]
gi|194178553|gb|EDW92164.1| ProsMA5 [Drosophila yakuba]
Length = 244
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLM-VSSTVEKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVSSTVEKIVEVD 71
>gi|145503886|ref|XP_001437915.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405076|emb|CAK70518.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +L+QVEYAMEA+ C+G+ +D I+L EK++ ++L D T +K+Y+L
Sbjct: 10 FSPD-GQLFQVEYAMEAVKRGLCCVGVRGKDAIILGVEKKSASRLQDVKTI-KKVYQLDH 67
Query: 103 SL 104
+L
Sbjct: 68 NL 69
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
+L+QVEYAMEA+ C+G+ +D I+L EK+ + + ++YQ+++ + ++
Sbjct: 15 QLFQVEYAMEAVKRGLCCVGVRGKDAIILGVEKKSASRLQDVKTIKKVYQLDHNL-CMTF 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+G L D +LA + R
Sbjct: 74 SG-----LNADARILANQTR 88
>gi|409730115|ref|ZP_11271706.1| proteasome subunit alpha [Halococcus hamelinensis 100A6]
gi|448722759|ref|ZP_21705290.1| proteasome subunit alpha [Halococcus hamelinensis 100A6]
gi|445788896|gb|EMA39597.1| proteasome subunit alpha [Halococcus hamelinensis 100A6]
Length = 250
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++ A +KR + L+ E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVKTTDGVVFAVDKRYQSPLV-ERESVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYA EA+ +G+ DG++ A +KR
Sbjct: 22 RLYQVEYAREAVKRGTASIGVKTTDGVVFAVDKR 55
>gi|281206885|gb|EFA81069.1| proteasome subunit alpha type 5 [Polysphondylium pallidum PN500]
Length = 243
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLD 89
++D + RL+QVEYA+EAI T +GI ++G++LA EKR T+ LL+
Sbjct: 9 DRDVNTFSSEGRLFQVEYALEAIKLGSTAIGIQCEEGVVLAVEKRLTSTLLE 60
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEY 55
RL+QVEYA+EAI T +GI ++G++LA EKRL + ++ +++Y
Sbjct: 20 RLFQVEYALEAIKLGSTAIGIQCEEGVVLAVEKRLTSTLLEPSSIQKVVEIDY 72
>gi|225718548|gb|ACO15120.1| Proteasome subunit alpha type-5 [Caligus clemensi]
Length = 243
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI + G++LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQSSAGVVLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI + G++LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQSSAGVVLAVEKRITS-----PLM-EPSSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
L D +L + R
Sbjct: 74 MACAFSGLIPDSKMLIDKAR 93
>gi|307104566|gb|EFN52819.1| hypothetical protein CHLNCDRAFT_26444 [Chlorella variabilis]
Length = 240
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T + + +G+++A EKR T+ LL E T+ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIAVRTDEGVVMAVEKRVTSPLL-EPTSIEKVAEVD 71
Query: 102 DSLNI 106
+ + +
Sbjct: 72 EHIGV 76
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T + + +G+++A EKR+ L S +E E H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIAVRTDEGVVMAVEKRVTS--PLLEPTS----IEKVAEVDEH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGVAMSGLTAD 84
>gi|237835989|ref|XP_002367292.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
gi|211964956|gb|EEB00152.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
gi|221484916|gb|EEE23206.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
gi|221506028|gb|EEE31663.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
Length = 258
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+ AI T +GI +DG++LA+E+R T+ LLD + +KI ++
Sbjct: 14 TFSPE-GRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLDHRSI-QKIVEID 71
Query: 102 D 102
D
Sbjct: 72 D 72
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEYA+ AI T +GI +DG++LA+E+R+
Sbjct: 20 RLFQVEYALGAIKLGSTAVGIQTKDGVILASERRIT 55
>gi|145481009|ref|XP_001426527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393602|emb|CAK59129.1| unnamed protein product [Paramecium tetraurelia]
Length = 233
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P +L+QVEYAMEA+ C+G+ +D I+L EK+ T+KL + T +K+Y+L +
Sbjct: 10 FSPD-GQLFQVEYAMEAVKRGLCCVGVRGKDIIVLGVEKKATSKLQNVKTI-KKVYQLDN 67
Query: 103 SL 104
+L
Sbjct: 68 NL 69
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
+L+QVEYAMEA+ C+G+ +D I+L EK+ + + ++YQ++
Sbjct: 15 QLFQVEYAMEAVKRGLCCVGVRGKDIIVLGVEKKATSKLQNVKTIKKVYQLD 66
>gi|219121310|ref|XP_002185881.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582730|gb|ACI65351.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +G+ +DG +LA EKR ++ LLD ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAVGLQTKDGCILAVEKRLSSPLLDP-SSVEKIAEV 70
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +DG +LA EKRL+ P VE E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAVGLQTKDGCILAVEKRLSSPL-LDPS-----SVEKIAEVDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGAAMSGLVADARTLVDHAR 93
>gi|1498589|gb|AAB93421.1| 20S proteasome alpha subunit PSMA5 [Drosophila melanogaster]
Length = 244
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVP-STVEKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
>gi|323452552|gb|EGB08426.1| hypothetical protein AURANDRAFT_60080 [Aureococcus anophagefferens]
Length = 247
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA++A+ T +GI DG++LA EKR T+ L+ E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIQAVKLGSTSIGIKTADGVVLAVEKRVTSTLM-ESSSIEKVMEI 70
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA++A+ T +GI DG++LA EKR+ S L S + +V ME SH
Sbjct: 20 RLFQVEYAIQAVKLGSTSIGIKTADGVVLAVEKRVT---STLMESSSIEKV---MEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 CGAAMSGLIADARTLVDHAR 93
>gi|448089552|ref|XP_004196836.1| Piso0_004062 [Millerozyma farinosa CBS 7064]
gi|448093836|ref|XP_004197867.1| Piso0_004062 [Millerozyma farinosa CBS 7064]
gi|359378258|emb|CCE84517.1| Piso0_004062 [Millerozyma farinosa CBS 7064]
gi|359379289|emb|CCE83486.1| Piso0_004062 [Millerozyma farinosa CBS 7064]
Length = 259
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +G+ +DGI+LA EK +N +P +R Q H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGVKCKDGIVLATEKIINSKL-LVPGKNRRIQT-----IDRH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + N+ +E ++ + IYK
Sbjct: 74 IGVAYSGLLPDG------RHFVNRGREEASSFKNIYK 104
>gi|340719003|ref|XP_003397948.1| PREDICTED: proteasome subunit alpha type-3-like [Bombus terrestris]
Length = 254
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA +A+ + GT +G+ +DGI+ A EK T+KL + G T+++I+ +
Sbjct: 15 FSPD-GRVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEVG-TNKRIFNIDK 72
Query: 103 SLNI 106
L +
Sbjct: 73 HLGM 76
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R++QVEYA +A+ + GT +G+ +DGI+ A EK + + R++ ++
Sbjct: 20 RVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEVGTNKRIFNID 71
>gi|322708799|gb|EFZ00376.1| proteasome subunit alpha type 3 [Metarhizium anisopliae ARSEF 23]
Length = 321
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKVVTSKLLKPG 62
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|24654389|ref|NP_725669.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
gi|24654391|ref|NP_477202.2| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
gi|12643296|sp|Q95083.2|PSA5_DROME RecName: Full=Proteasome subunit alpha type-5
gi|7302800|gb|AAF57875.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
gi|16769466|gb|AAL28952.1| LD33318p [Drosophila melanogaster]
gi|21645223|gb|AAM70874.1| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
gi|220944274|gb|ACL84680.1| ProsMA5-PA [synthetic construct]
gi|220954210|gb|ACL89648.1| ProsMA5-PA [synthetic construct]
Length = 244
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVP-STVEKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
>gi|380012265|ref|XP_003690206.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit alpha
type-3-like [Apis florea]
Length = 254
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R++QVEYA +A+ + GT +G+ +DGI+ A EK T+KL + G T+++I+ +
Sbjct: 15 FSPD-GRVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEAG-TNKRIFNI 70
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ + GT +G+ +DGI+ A EK
Sbjct: 20 RVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEK 52
>gi|440909682|gb|ELR59567.1| Proteasome subunit alpha type-5, partial [Bos grunniens mutus]
Length = 232
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 5 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 61
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 11 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 64
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 65 IGCAMSGLIADAKTLIDKAR 84
>gi|116782788|gb|ABK22658.1| unknown [Picea sitchensis]
Length = 249
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++Q+EYA +A+ ++GT +GI +DGI+L EK +K+L EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQIEYATKAVDNSGTVIGIKCKDGIVLGVEKLIASKMLLEG-SNRRIHAVH 71
Query: 102 D 102
+
Sbjct: 72 N 72
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R++Q+EYA +A+ ++GT +GI +DGI+L EK + R++ V +
Sbjct: 19 GRVFQIEYATKAVDNSGTVIGIKCKDGIVLGVEKLIASKMLLEGSNRRIHAVH------N 72
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
HAG + LA DG + A ++ E T+ E Y
Sbjct: 73 HAGMAVAGLAADGRQIVARAKS------EATSYENTY 103
>gi|307594924|ref|YP_003901241.1| proteasome endopeptidase complex subunit alpha [Vulcanisaeta
distributa DSM 14429]
gi|307550125|gb|ADN50190.1| proteasome endopeptidase complex, alpha subunit [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P LYQV YA EA+ +GI DG++LAAEKR + L+D ++ EK+Y + D
Sbjct: 16 FSPE-GELYQVRYAGEAVKRGWATVGIKCVDGVVLAAEKRKVSALIDL-SSIEKVYMIDD 73
Query: 103 SLNI 106
+ I
Sbjct: 74 HVGI 77
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV YA EA+ +GI DG++LAAEKR L + ++Y ++ H
Sbjct: 22 LYQVRYAGEAVKRGWATVGIKCVDGVVLAAEKRKVSALIDLSSIEKVYMID------DHV 75
Query: 64 GTCLGILAQDGILL---AAEKRNTNKLL 88
G L D +L A ++ T+KLL
Sbjct: 76 GIAASGLLSDARVLIEYARQEAQTHKLL 103
>gi|384485479|gb|EIE77659.1| hypothetical protein RO3G_02363 [Rhizopus delemar RA 99-880]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +G++LA EKR ++ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGTTAIGVQTSEGVVLAVEKRVSSTLL-EPSSIEKIMEID 71
Query: 102 DSL 104
+ L
Sbjct: 72 EHL 74
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +G++LA EKR++ + L S +E ME H
Sbjct: 20 RLFQVEYAIEAIKLGTTAIGVQTSEGVVLAVEKRVSS--TLLEPSS----IEKIMEIDEH 73
Query: 63 AGTCLGILAQD 73
G + + D
Sbjct: 74 LGCAVSGMTAD 84
>gi|384251552|gb|EIE25029.1| proteasome subunit alpha [Coccomyxa subellipsoidea C-169]
Length = 240
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +G+ +++G++L EKR T+ LL E ++ EK+ ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGTTAIGVRSKEGVVLVVEKRVTSPLL-EPSSIEKVAEVD 71
Query: 102 DSLNI 106
+ +
Sbjct: 72 THIGV 76
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ +++G++L EKR+ + +E E +H
Sbjct: 20 RLFQVEYAIEAIKLGTTAIGVRSKEGVVLVVEKRVTSP------LLEPSSIEKVAEVDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGVAMSGLTADARTLIEHAR 93
>gi|48096769|ref|XP_392518.1| PREDICTED: proteasome subunit alpha type-3 [Apis mellifera]
Length = 254
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R++QVEYA +A+ + GT +G+ +DGI+ A EK T+KL + G T+++I+ +
Sbjct: 15 FSPD-GRVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEAG-TNKRIFNI 70
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ + GT +G+ +DGI+ A EK
Sbjct: 20 RVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEK 52
>gi|350396055|ref|XP_003484425.1| PREDICTED: proteasome subunit alpha type-3-like [Bombus impatiens]
Length = 254
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA +A+ + GT +G+ +DGI+ A EK T+KL + G T+++I+ +
Sbjct: 15 FSPD-GRVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEVG-TNKRIFNIDK 72
Query: 103 SLNI 106
L +
Sbjct: 73 HLGM 76
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R++QVEYA +A+ + GT +G+ +DGI+ A EK + + R++ ++
Sbjct: 20 RVFQVEYAQKAVENGGTVIGLRGKDGIVFAVEKIVTSKLYEVGTNKRIFNID 71
>gi|345320566|ref|XP_001516559.2| PREDICTED: proteasome subunit alpha type-5-like, partial
[Ornithorhynchus anatinus]
Length = 212
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 10 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 66
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 16 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 69
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 70 IGCAMSGLIADAKTLIDKAR 89
>gi|225679898|gb|EEH18182.1| proteasome subunit alpha type-5 [Paracoccidioides brasiliensis
Pb03]
Length = 272
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 37 LNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEK 96
L+ + +F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EK
Sbjct: 36 LSPNSTFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLL-ETSSVEK 93
Query: 97 IYKL 100
I ++
Sbjct: 94 IVEI 97
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 47 RLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVT 82
>gi|227827674|ref|YP_002829454.1| proteasome subunit alpha [Sulfolobus islandicus M.14.25]
gi|227830371|ref|YP_002832151.1| proteasome subunit alpha [Sulfolobus islandicus L.S.2.15]
gi|229579189|ref|YP_002837587.1| proteasome subunit alpha [Sulfolobus islandicus Y.G.57.14]
gi|229582059|ref|YP_002840458.1| proteasome subunit alpha [Sulfolobus islandicus Y.N.15.51]
gi|229584878|ref|YP_002843380.1| proteasome subunit alpha [Sulfolobus islandicus M.16.27]
gi|238619845|ref|YP_002914671.1| proteasome subunit alpha [Sulfolobus islandicus M.16.4]
gi|284997877|ref|YP_003419644.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773346|ref|YP_005645912.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385775984|ref|YP_005648552.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|259535055|sp|C3N5R0.1|PSA_SULIA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535059|sp|C4KHD9.1|PSA_SULIK RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535063|sp|C3MQ43.1|PSA_SULIL RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535067|sp|C3MVG1.1|PSA_SULIM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535070|sp|C3NHC6.1|PSA_SULIN RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535074|sp|C3NEC6.1|PSA_SULIY RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|227456819|gb|ACP35506.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.S.2.15]
gi|227459470|gb|ACP38156.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009903|gb|ACP45665.1| Proteasome endopeptidase complex [Sulfolobus islandicus
Y.G.57.14]
gi|228012775|gb|ACP48536.1| Proteasome endopeptidase complex [Sulfolobus islandicus
Y.N.15.51]
gi|228019928|gb|ACP55335.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380915|gb|ACR42003.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445772|gb|ADB87274.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323474732|gb|ADX85338.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477460|gb|ADX82698.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 241
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
LYQV+YA EA+ T +GI ++ G+++A+EKR Q + + +++ ++ H
Sbjct: 23 LYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLID------DHV 76
Query: 64 GTCLGILAQDGILLAAEKRN 83
G LA DG +L RN
Sbjct: 77 GCSFAGLASDGRVLIDYARN 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P S LYQV+YA EA+ T +GI ++ G+++A+EKR LLD + EK++ + D
Sbjct: 17 FSPDGS-LYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSI-EKVFLIDD 74
>gi|115400876|ref|XP_001216026.1| proteasome component C1 [Aspergillus terreus NIH2624]
gi|114189967|gb|EAU31667.1| proteasome component C1 [Aspergillus terreus NIH2624]
Length = 311
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE ++ +YK
Sbjct: 74 VGIVSSGLVPDGRHFVSRAR------DEASSWRGVYK 104
>gi|429329910|gb|AFZ81669.1| proteasome subunit alpha type, putative [Babesia equi]
Length = 237
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P L QVEYAMEA+ G +G+ A D +++AAEK+ KL D+G ++KI +L +
Sbjct: 10 FSPD-GHLMQVEYAMEAVKRGGCVVGVKANDAVIIAAEKKLLTKLQDQG-CNKKILQLDE 67
Query: 103 SLNI 106
++ I
Sbjct: 68 NVAI 71
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
L QVEYAMEA+ G +G+ A D +++AAEK+L
Sbjct: 16 LMQVEYAMEAVKRGGCVVGVKANDAVIIAAEKKL 49
>gi|397466400|ref|XP_003804950.1| PREDICTED: proteasome subunit alpha type-5, partial [Pan paniscus]
Length = 221
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|194755311|ref|XP_001959935.1| GF13117 [Drosophila ananassae]
gi|190621233|gb|EDV36757.1| GF13117 [Drosophila ananassae]
Length = 243
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTV-EKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
>gi|84490036|ref|YP_448268.1| proteasome subunit alpha [Methanosphaera stadtmanae DSM 3091]
gi|84373355|gb|ABC57625.1| PsmA [Methanosphaera stadtmanae DSM 3091]
Length = 287
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RL+Q+EYA EA+ T +GI++++G++ A +K+ +KL+ ++ EKI+K+ D
Sbjct: 16 FSPD-GRLFQIEYAREAVKRGTTSVGIISKEGVVFAVDKKIKSKLI-VPSSIEKIFKIDD 73
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+Q+EYA EA+ T +GI++++G++ A +K++ + ++++++ + I+
Sbjct: 21 RLFQIEYAREAVKRGTTSVGIISKEGVVFAVDKKIKSKLIVPSSIEKIFKID---DHIAT 77
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL 87
A + L A+ I +A + NKL
Sbjct: 78 ASSGLVADARRLIDIARNQAQVNKL 102
>gi|242046736|ref|XP_002461114.1| hypothetical protein SORBIDRAFT_02g040990 [Sorghum bicolor]
gi|241924491|gb|EER97635.1| hypothetical protein SORBIDRAFT_02g040990 [Sorghum bicolor]
Length = 249
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK +K++ EG ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVASKMMLEG-SNRRIHSVH 71
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVASKMMLEGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + KL E + EK+Y
Sbjct: 74 SGLAVAGLAADGRQIVSR----TKL--EAASYEKVY 103
>gi|335775191|gb|AEH58489.1| proteasome subunit alpha type-5-like protein [Equus caballus]
Length = 215
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|444724743|gb|ELW65341.1| Proteasome subunit alpha type-5 [Tupaia chinensis]
Length = 254
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 27 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 83
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 33 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 86
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 87 IGCAMSGLIADAKTLIDKAR 106
>gi|294883405|ref|XP_002770924.1| 20S proteasome subunit PAA1, putative [Perkinsus marinus ATCC
50983]
gi|239874049|gb|EER02740.1| 20S proteasome subunit PAA1, putative [Perkinsus marinus ATCC
50983]
Length = 52
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 82
+F P RLYQVEYAMEAI++AG+ +G+L + ++LA EK+
Sbjct: 11 TFSPE-GRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKK 50
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RLYQVEYAMEAI++AG+ +G+L + ++LA EK+
Sbjct: 17 RLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKK 50
>gi|223994791|ref|XP_002287079.1| proteasome subunit alpha type 3 [Thalassiosira pseudonana CCMP1335]
gi|220978394|gb|EED96720.1| proteasome subunit alpha type 3 [Thalassiosira pseudonana CCMP1335]
Length = 274
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++Q+EYA +A+ +AGT LG+ DG++L EK +K+L TT +I+ +
Sbjct: 14 TFSPD-GRIFQIEYASKAVENAGTALGLRCSDGVVLCVEKPLQHKMLVAATTGRRIHTVD 72
Query: 102 DSLNI 106
+ +
Sbjct: 73 EGAGV 77
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQ 39
R++Q+EYA +A+ +AGT LG+ DG++L EK L
Sbjct: 20 RIFQIEYASKAVENAGTALGLRCSDGVVLCVEKPLQH 56
>gi|126310923|ref|XP_001372468.1| PREDICTED: proteasome subunit alpha type-5-like [Monodelphis
domestica]
gi|395535509|ref|XP_003769768.1| PREDICTED: proteasome subunit alpha type-5 [Sarcophilus harrisii]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|432103921|gb|ELK30754.1| Proteasome subunit alpha type-5 [Myotis davidii]
Length = 315
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 88 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 144
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ + +E +E +H
Sbjct: 94 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSP------LMEPSSIEKIVEIDAH 147
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 148 IGCAMSGLIADAKTLIDKAR 167
>gi|326936240|ref|XP_003214164.1| PREDICTED: proteasome subunit alpha type-5-like, partial [Meleagris
gallopavo]
Length = 231
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 4 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 60
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 10 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDSH 63
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 64 IGCAMSGLIADAKTLIDKAR 83
>gi|257386104|ref|YP_003175877.1| proteasome subunit alpha [Halomicrobium mukohataei DSM 12286]
gi|257168411|gb|ACV46170.1| Proteasome endopeptidase complex [Halomicrobium mukohataei DSM
12286]
Length = 247
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA++ + LL E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGVRTADGVVLAADRHARSPLL-ERDSIEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HVGIAS 80
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EA+ +G+ DG++LAA++
Sbjct: 22 RLYQVEYAREAVKRGTASVGVRTADGVVLAADR 54
>gi|146414760|ref|XP_001483350.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
gi|146391823|gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
Length = 251
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E T+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLL-EHTSIEKIVEI 70
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +GI +G++L EKR+ S L H S +E +E SH
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTS--SLLEHTS----IEKIVEIDSH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLTAD 84
>gi|358060952|dbj|GAA93374.1| hypothetical protein E5Q_00014 [Mixia osmundae IAM 14324]
Length = 253
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNIIT 108
R++Q+EYA +A+ +AGT LG+ +DGI+LA EK +KLL G + +I + D+ + T
Sbjct: 20 RIFQIEYAAKAVENAGTALGLRVKDGIVLAVEKLVQSKLLVPG-ANRRIASVDDTAGLAT 78
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSR 49
R++Q+EYA +A+ +AGT LG+ +DGI+LA EK L Q +P +R
Sbjct: 20 RIFQIEYAAKAVENAGTALGLRVKDGIVLAVEK-LVQSKLLVPGANR 65
>gi|54696298|gb|AAV38521.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
construct]
gi|61367252|gb|AAX42972.1| proteasome subunit alpha type 5 [synthetic construct]
Length = 242
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|7106387|ref|NP_036097.1| proteasome subunit alpha type-5 [Mus musculus]
gi|23110942|ref|NP_002781.2| proteasome subunit alpha type-5 isoform 1 [Homo sapiens]
gi|62751982|ref|NP_001015566.1| proteasome subunit alpha type-5 [Bos taurus]
gi|222136590|ref|NP_001138373.1| proteasome subunit alpha type-5 [Sus scrofa]
gi|386780888|ref|NP_001247538.1| proteasome subunit alpha type-5 [Macaca mulatta]
gi|194211033|ref|XP_001918089.1| PREDICTED: proteasome subunit alpha type-5-like isoform 1 [Equus
caballus]
gi|296208738|ref|XP_002751222.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Callithrix
jacchus]
gi|297664206|ref|XP_002810542.1| PREDICTED: proteasome subunit alpha type-5 [Pongo abelii]
gi|301767678|ref|XP_002919250.1| PREDICTED: proteasome subunit alpha type-5-like [Ailuropoda
melanoleuca]
gi|332237497|ref|XP_003267940.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Nomascus
leucogenys]
gi|344275588|ref|XP_003409594.1| PREDICTED: proteasome subunit alpha type-5-like [Loxodonta
africana]
gi|348586990|ref|XP_003479251.1| PREDICTED: proteasome subunit alpha type-5-like [Cavia porcellus]
gi|354497813|ref|XP_003511013.1| PREDICTED: proteasome subunit alpha type-5-like [Cricetulus
griseus]
gi|359319848|ref|XP_003639184.1| PREDICTED: proteasome subunit alpha type-5-like [Canis lupus
familiaris]
gi|395821581|ref|XP_003784116.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Otolemur
garnettii]
gi|402855528|ref|XP_003892373.1| PREDICTED: proteasome subunit alpha type-5 [Papio anubis]
gi|403284168|ref|XP_003933451.1| PREDICTED: proteasome subunit alpha type-5 [Saimiri boliviensis
boliviensis]
gi|410967900|ref|XP_003990451.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Felis catus]
gi|426216148|ref|XP_004002329.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Ovis aries]
gi|12229953|sp|Q9Z2U1.1|PSA5_MOUSE RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain zeta chain; AltName: Full=Multicatalytic
endopeptidase complex zeta chain; AltName:
Full=Proteasome zeta chain
gi|38258905|sp|P28066.3|PSA5_HUMAN RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain zeta chain; AltName: Full=Multicatalytic
endopeptidase complex zeta chain; AltName:
Full=Proteasome zeta chain
gi|75060919|sp|Q5E987.1|PSA5_BOVIN RecName: Full=Proteasome subunit alpha type-5
gi|378792306|pdb|3UNB|D Chain D, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792320|pdb|3UNB|R Chain R, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792334|pdb|3UNB|FF Chain f, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792348|pdb|3UNB|TT Chain t, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792362|pdb|3UNE|D Chain D, Mouse Constitutive 20s Proteasome
gi|378792376|pdb|3UNE|R Chain R, Mouse Constitutive 20s Proteasome
gi|378792390|pdb|3UNE|FF Chain f, Mouse Constitutive 20s Proteasome
gi|378792404|pdb|3UNE|TT Chain t, Mouse Constitutive 20s Proteasome
gi|378792418|pdb|3UNF|D Chain D, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792432|pdb|3UNF|R Chain R, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792446|pdb|3UNH|D Chain D, Mouse 20s Immunoproteasome
gi|378792460|pdb|3UNH|R Chain R, Mouse 20s Immunoproteasome
gi|3805976|gb|AAC69149.1| zeta proteasome chain [Mus musculus]
gi|14715088|gb|AAH10709.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|38014563|gb|AAH60575.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Rattus
norvegicus]
gi|48145811|emb|CAG33128.1| PSMA5 [Homo sapiens]
gi|53734656|gb|AAH83342.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|59858431|gb|AAX09050.1| proteasome alpha 5 subunit [Bos taurus]
gi|74137676|dbj|BAE35866.1| unnamed protein product [Mus musculus]
gi|74179944|dbj|BAE36528.1| unnamed protein product [Mus musculus]
gi|74228645|dbj|BAE25389.1| unnamed protein product [Mus musculus]
gi|74353432|gb|AAI03752.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354487|gb|AAI02020.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354509|gb|AAI02021.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354585|gb|AAI02344.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Bos taurus]
gi|74355765|gb|AAI02019.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|80478701|gb|AAI08369.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|119576785|gb|EAW56381.1| proteasome (prosome, macropain) subunit, alpha type, 5, isoform
CRA_a [Homo sapiens]
gi|148670013|gb|EDL01960.1| mCG4051 [Mus musculus]
gi|149025685|gb|EDL81928.1| proteasome (prosome, macropain) subunit, alpha type 5, isoform
CRA_a [Rattus norvegicus]
gi|189053884|dbj|BAG36153.1| unnamed protein product [Homo sapiens]
gi|261860718|dbj|BAI46881.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
construct]
gi|296489341|tpg|DAA31454.1| TPA: proteasome alpha 5 subunit [Bos taurus]
gi|351708756|gb|EHB11675.1| Proteasome subunit alpha type-5 [Heterocephalus glaber]
gi|355558236|gb|EHH15016.1| hypothetical protein EGK_01047 [Macaca mulatta]
gi|355745506|gb|EHH50131.1| hypothetical protein EGM_00908 [Macaca fascicularis]
gi|380814784|gb|AFE79266.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|383420087|gb|AFH33257.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|384948316|gb|AFI37763.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|410250286|gb|JAA13110.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|410295702|gb|JAA26451.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|410333681|gb|JAA35787.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|417397701|gb|JAA45884.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Desmodus rotundus]
gi|431896452|gb|ELK05864.1| Proteasome subunit alpha type-5 [Pteropus alecto]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|389630560|ref|XP_003712933.1| proteasome component C1 [Magnaporthe oryzae 70-15]
gi|351645265|gb|EHA53126.1| proteasome component C1 [Magnaporthe oryzae 70-15]
gi|440472419|gb|ELQ41281.1| proteasome component C1 [Magnaporthe oryzae Y34]
Length = 292
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSVGIRCKDGVVLAVEKVVTSKLLKPG 62
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVENGGTSVGIRCKDGVVLAVEK 52
>gi|148689471|gb|EDL21418.1| mCG13747 [Mus musculus]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|448578609|ref|ZP_21644029.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
gi|445725787|gb|ELZ77407.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
Length = 246
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ +G+ +DG++LAA + + LL+ G+ EK++K+ +
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVVGVRTKDGVVLAARRSARSPLLEAGSI-EKLHKIDE 73
Query: 103 SL 104
L
Sbjct: 74 GL 75
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ +G+ +DG++LAA + + +L++++ + A S
Sbjct: 21 RIYQVEYAREAVKRGAPVVGVRTKDGVVLAARRSARSPLLEAGSIEKLHKIDEGLGAAS 79
>gi|74137638|dbj|BAE35848.1| unnamed protein product [Mus musculus]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|387017840|gb|AFJ51038.1| Proteasome subunit alpha type-5 [Crotalus adamanteus]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|71897167|ref|NP_001026578.1| proteasome subunit alpha type-5 [Gallus gallus]
gi|311771753|ref|NP_001185745.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
gi|53133117|emb|CAG31964.1| hypothetical protein RCJMB04_14i9 [Gallus gallus]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|426330627|ref|XP_004026308.1| PREDICTED: proteasome subunit alpha type-5-like [Gorilla gorilla
gorilla]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|124486159|ref|YP_001030775.1| proteasome subunit alpha [Methanocorpusculum labreanum Z]
gi|124363700|gb|ABN07508.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 272
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ T +GI + G++L +KR ++LL E ++ EKI+++ +
Sbjct: 18 FSPD-GRLYQVEYAREAVKRGTTAVGIKCKTGVVLLVDKRVNSRLL-EPSSIEKIFRIDE 75
Query: 103 SLNI 106
+ +
Sbjct: 76 HIGV 79
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ T +GI + G++L +KR+N + ++++++ H
Sbjct: 23 RLYQVEYAREAVKRGTTAVGIKCKTGVVLLVDKRVNSRLLEPSSIEKIFRID------EH 76
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D +L R
Sbjct: 77 IGVASSGLVGDARILVDRAR 96
>gi|320581767|gb|EFW95986.1| alpha subunit of the 20S core complex of the 26S proteasome,
putative proteasome component, putative [Ogataea
parapolymorpha DL-1]
Length = 583
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 49 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNII 107
RLYQVEYA +A++ + TCLG++ +D ++ ++K+ +KLLD T S I+++ DS+ ++
Sbjct: 355 RLYQVEYAFKAVNSSNITCLGLVGEDSSVVVSQKKIPDKLLDPSTIS-YIFQVSDSIGML 413
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQV 53
RLYQVEYA +A++ + TCLG++ +D ++ ++K++ +S ++QV
Sbjct: 355 RLYQVEYAFKAVNSSNITCLGLVGEDSSVVVSQKKIPDKLLDPSTISYIFQV 406
>gi|302780099|ref|XP_002971824.1| hypothetical protein SELMODRAFT_270930 [Selaginella moellendorffii]
gi|302781148|ref|XP_002972348.1| hypothetical protein SELMODRAFT_270972 [Selaginella moellendorffii]
gi|300159815|gb|EFJ26434.1| hypothetical protein SELMODRAFT_270972 [Selaginella moellendorffii]
gi|300160123|gb|EFJ26741.1| hypothetical protein SELMODRAFT_270930 [Selaginella moellendorffii]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++Q EYA +A+ ++GT +G+ +DG++L EK +K+L EG ++++I+ +H
Sbjct: 14 TFSPD-GRVFQTEYASKAVDNSGTAIGVTCKDGVVLGIEKLTPSKMLVEG-SNKRIHHVH 71
Query: 102 D 102
+
Sbjct: 72 E 72
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q EYA +A+ ++GT +G+ +DG++L EK R++ V H
Sbjct: 20 RVFQTEYASKAVDNSGTAIGVTCKDGVVLGIEKLTPSKMLVEGSNKRIHHVH------EH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNK 86
AG + LA DG + A R K
Sbjct: 74 AGMAVAGLAADGRQVVARARAEAK 97
>gi|156844179|ref|XP_001645153.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156115811|gb|EDO17295.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 260
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGITTREGVVLGVEKRATSPLL-ESDSIEKIVEID 71
Query: 102 D 102
+
Sbjct: 72 N 72
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGITTREGVVLGVEKR 53
>gi|74141404|dbj|BAE35982.1| unnamed protein product [Mus musculus]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIKTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIKTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|355714001|gb|AES04856.1| proteasome subunit, alpha type, 5 [Mustela putorius furo]
Length = 239
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 13 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 69
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 19 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 72
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 73 IGCAMSGLIADAKTLIDKAR 92
>gi|260788842|ref|XP_002589458.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
gi|229274635|gb|EEN45469.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+Q+EYA+EAI T +GI +GI+LA EKR T+ L+ T+ EKI ++
Sbjct: 14 TFSPE-GRLFQIEYAIEAIKLGSTAIGIQTSEGIVLAVEKRITSPLM-VSTSVEKIVEV 70
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+Q+EYA+EAI T +GI +GI+LA EKR+ P M VE +E SH
Sbjct: 20 RLFQIEYAIEAIKLGSTAIGIQTSEGIVLAVEKRITS-----PLMVST-SVEKIVEVDSH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAVSGLVAD 84
>gi|149235418|ref|XP_001523587.1| proteasome component C1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452566|gb|EDK46822.1| proteasome component C1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 273
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYAM+A+ + GT +GI +DGI+LA EK +N R+ V+ H
Sbjct: 20 RNFQVEYAMKAVENGGTSIGIKCKDGIVLAVEKIINSKLLVPGKNKRIQTVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
G L DG + N+ +E + + I+K+
Sbjct: 74 VGVVYSGLLPDG------RHFVNRSREEAQSFKSIFKI 105
>gi|67539246|ref|XP_663397.1| hypothetical protein AN5793.2 [Aspergillus nidulans FGSC A4]
gi|40743696|gb|EAA62886.1| hypothetical protein AN5793.2 [Aspergillus nidulans FGSC A4]
gi|259484718|tpe|CBF81179.1| TPA: proteasome subunit alpha type 3, putative (AFU_orthologue;
AFUA_6G06350) [Aspergillus nidulans FGSC A4]
Length = 298
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIITSKLLKPG-ANKRISTVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIITSKLLKPGANKRISTVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G LA DG + R DE ++ IYK
Sbjct: 74 VGIVSSGLAPDGRHFVSRAR------DEASSWRGIYK 104
>gi|45387823|ref|NP_991271.1| proteasome subunit alpha type-5 [Danio rerio]
gi|37681911|gb|AAQ97833.1| proteasome subunit, alpha type, 5 [Danio rerio]
gi|47938031|gb|AAH71495.1| Proteasome (prosome, macropain) subunit, alpha type,5 [Danio rerio]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|226358651|gb|ACO51178.1| proteasome (prosome, macropain) subunit alpha type 5
[Hypophthalmichthys nobilis]
Length = 228
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|195998175|ref|XP_002108956.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
gi|190589732|gb|EDV29754.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
Length = 230
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +GI+LA E+R T+ L E + EKI K+
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIKTSEGIVLAVERRITSPLT-EPESMEKILKID 71
Query: 102 DSL 104
+ +
Sbjct: 72 NHI 74
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +GI+LA E+R+ + M ++ +++ +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIKTSEGIVLAVERRITSPLTEPESMEKILKID------NH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLIADSRTLVDTAR 93
>gi|408397596|gb|EKJ76737.1| hypothetical protein FPSE_03148 [Fusarium pseudograminearum
CS3096]
Length = 296
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ GT +GI A+DG++LA EK ++KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVESGGTSIGIRAKDGVVLAIEKVVSSKLLKPG 62
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ GT +GI A+DG++LA EK ++ R+ V+ S
Sbjct: 19 GRNFQVEYAVKAVESGGTSIGIRAKDGVVLAIEKVVSSKLLKPGANKRIATVD------S 72
Query: 62 HAGTCLGILAQDG 74
H G + DG
Sbjct: 73 HVGAVSSGMVPDG 85
>gi|444318633|ref|XP_004179974.1| hypothetical protein TBLA_0C06620 [Tetrapisispora blattae CBS 6284]
gi|387513015|emb|CCH60455.1| hypothetical protein TBLA_0C06620 [Tetrapisispora blattae CBS 6284]
Length = 262
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEY++EAI T +GI +G++L EKR T++LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGISTSEGVVLGVEKRATSRLL-ESDSIEKIVEIE 71
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEY++EAI T +GI +G++L EKR SRL + +E +E
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGISTSEGVVLGVEKRAT---------SRLLESDSIEKIVEI 70
Query: 60 ISHAGTCLGILAQD 73
H G + L D
Sbjct: 71 EKHIGCAMSGLTAD 84
>gi|46107362|ref|XP_380740.1| hypothetical protein FG00564.1 [Gibberella zeae PH-1]
Length = 296
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ GT +GI A+DG++LA EK ++KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVESGGTSIGIRAKDGVVLAIEKVVSSKLLKPG 62
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ GT +GI A+DG++LA EK ++ R+ V+ S
Sbjct: 19 GRNFQVEYAVKAVESGGTSIGIRAKDGVVLAIEKVVSSKLLKPGANKRIATVD------S 72
Query: 62 HAGTCLGILAQDG 74
H G + DG
Sbjct: 73 HVGAVSSGMVPDG 85
>gi|448534850|ref|ZP_21621947.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
gi|445704001|gb|ELZ55921.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
Length = 274
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 17 FSPD-GRIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLM-EAESIEKLHKLDD 74
Query: 103 SLNIIT 108
L +
Sbjct: 75 HLGTAS 80
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R+YQVEYA EA+S +G+ DG++ A R + + +L++++
Sbjct: 22 RIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLMEAESIEKLHKLD 73
>gi|448437438|ref|ZP_21587461.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
gi|445681165|gb|ELZ33604.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
Length = 262
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 17 FSPD-GRIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLM-EAESIEKLHKLDD 74
Query: 103 SLNIIT 108
L +
Sbjct: 75 HLGTAS 80
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYA EA+S +G+ DG++ A R
Sbjct: 22 RIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSR 55
>gi|430813628|emb|CCJ29031.1| unnamed protein product [Pneumocystis jirovecii]
Length = 251
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 35 KRLNQDFS---FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
+R D S F P R++QVEYA +AI ++GT LGI +DG++LA E +KLL G
Sbjct: 6 RRTGYDLSNSTFSPD-GRIFQVEYACKAIENSGTALGIKVKDGVVLAVEHLIQSKLLIPG 64
Query: 92 TTSEKIYKLHDSLNI 106
++++IY + + + +
Sbjct: 65 -SNKRIYTVDEHIGV 78
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +AI ++GT LGI +DG++LA E + R+Y V+ H
Sbjct: 22 RIFQVEYACKAIENSGTALGIKVKDGVVLAVEHLIQSKLLIPGSNKRIYTVD------EH 75
Query: 63 AGTCLGILAQDG 74
G + L DG
Sbjct: 76 IGVAIAGLNTDG 87
>gi|317037422|ref|XP_001399133.2| proteasome component C1 [Aspergillus niger CBS 513.88]
Length = 297
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE ++ +YK
Sbjct: 74 VGIVSAGLVPDGRHFVSRAR------DEASSWRSVYK 104
>gi|83315915|ref|XP_730997.1| proteasome subunit alpha type 2 [Plasmodium yoelii yoelii 17XNL]
gi|23490901|gb|EAA22562.1| proteasome subunit alpha type 2 [Plasmodium yoelii yoelii]
Length = 235
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 33 AEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
A+ N + +L Q+EYA+ +S + LGI A++G+++A EK+ N+L++E T
Sbjct: 2 ADGEYNFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKTPNELIEE-T 60
Query: 93 TSEKIYKLHDSLNII 107
+ KI ++ D + I+
Sbjct: 61 SIYKIQQISDHIGIV 75
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
+L Q+EYA+ +S + LGI A++G+++A EK+
Sbjct: 18 KLVQIEYALNRVSSSSPALGIRAKNGVIIATEKK 51
>gi|448592345|ref|ZP_21651452.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
gi|445731350|gb|ELZ82934.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
Length = 246
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+ +G+ +DG++LAA + + LL+ G+ EK++K+ +
Sbjct: 16 FSPD-GRIYQVEYAREAVKRGAPVVGVRTKDGVVLAARRSARSPLLEAGSI-EKLHKIDE 73
Query: 103 SL 104
L
Sbjct: 74 GL 75
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA+ +G+ +DG++LAA + + +L++++ + A S
Sbjct: 21 RIYQVEYAREAVKRGAPVVGVRTKDGVVLAARRSARSPLLEAGSIEKLHKIDEGLGAAS 79
>gi|448500211|ref|ZP_21611690.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
gi|445696933|gb|ELZ49012.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
Length = 260
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 17 FSPD-GRIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLM-EAESIEKLHKLDD 74
Query: 103 SLNIIT 108
L +
Sbjct: 75 HLGTAS 80
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R+YQVEYA EA+S +G+ DG++ A R + + +L++++
Sbjct: 22 RIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLMEAESIEKLHKLD 73
>gi|448490545|ref|ZP_21608003.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
gi|445693663|gb|ELZ45805.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
Length = 266
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
L +
Sbjct: 74 HLGTAS 79
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R+YQVEYA EA+S +G+ DG++ A R + + +L++++
Sbjct: 21 RIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLMEAESIEKLHKLD 72
>gi|327270997|ref|XP_003220274.1| PREDICTED: proteasome subunit alpha type-5-like [Anolis
carolinensis]
Length = 232
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDSH 73
Query: 63 AG 64
G
Sbjct: 74 IG 75
>gi|145351122|ref|XP_001419934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580167|gb|ABO98227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 237
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T + I ++G++LA EKR T+ L+D ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIAIKTREGVVLAVEKRATSPLMD-ASSLEKIAEI 70
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T + I ++G++LA EKR + ++ +++ +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIAIKTREGVVLAVEKRATSPLMDASSLEKIAEID------AH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D + R
Sbjct: 74 VGCAVSGLTADAWTMVEHGR 93
>gi|157869192|ref|XP_001683148.1| putative proteasome alpha 5 subunit [Leishmania major strain
Friedlin]
gi|68224031|emb|CAJ05127.1| putative proteasome alpha 5 subunit [Leishmania major strain
Friedlin]
Length = 244
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI G++LAAEKR+ MS++ ME SH
Sbjct: 20 RIFQIEYAVEAIKLGSTSLGIRTPKGVVLAAEKRVPSTLVVPSSMSKI------MEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
+ + D +L R
Sbjct: 74 IAAVMSGMVADARILVEHAR 93
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++Q+EYA+EAI T LGI G++LAAEKR + L+
Sbjct: 14 TFSPE-GRIFQIEYAVEAIKLGSTSLGIRTPKGVVLAAEKRVPSTLV 59
>gi|358373518|dbj|GAA90116.1| proteasome subunit alpha type 3 [Aspergillus kawachii IFO 4308]
Length = 297
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE ++ +YK
Sbjct: 74 VGIVSAGLVPDGRHFVSRAR------DEASSWRSVYK 104
>gi|126459549|ref|YP_001055827.1| proteasome subunit alpha [Pyrobaculum calidifontis JCM 11548]
gi|126249270|gb|ABO08361.1| transcriptional regulator, Fis family [Pyrobaculum calidifontis JCM
11548]
Length = 242
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P ++YQVEYA EA+ +G+ + G++LAAEKR + L D T+ EKIY + +
Sbjct: 16 FSPE-GKIYQVEYAGEAVKRGWPTVGVKCKGGVVLAAEKRKISALFDP-TSLEKIYLVDE 73
Query: 103 SLNI 106
+ I
Sbjct: 74 HVAI 77
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
++YQVEYA EA+ +G+ + G++LAAEKR + ++Y V+ + AIS
Sbjct: 21 KIYQVEYAGEAVKRGWPTVGVKCKGGVVLAAEKRKISALFDPTSLEKIYLVDEHV-AISP 79
Query: 63 AG 64
+G
Sbjct: 80 SG 81
>gi|50289853|ref|XP_447358.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526668|emb|CAG60295.1| unnamed protein product [Candida glabrata]
Length = 260
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G++ +G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVVTSEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +G++ +G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVVTSEGVVLGVEKR 53
>gi|425770044|gb|EKV08519.1| Proteasome subunit alpha type 3, putative [Penicillium digitatum
Pd1]
gi|425771735|gb|EKV10172.1| Proteasome subunit alpha type 3, putative [Penicillium digitatum
PHI26]
Length = 293
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAVGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+
Sbjct: 19 GRNFQVEYAVKAVENGGTAVGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------R 72
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
H G L DG + R DE ++ YK
Sbjct: 73 HVGIVSAGLVPDGRHFVSRAR------DEASSWRSTYK 104
>gi|156717484|ref|NP_001096282.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
(Silurana) tropicalis]
gi|134025463|gb|AAI35541.1| LOC100124849 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|326484941|gb|EGE08951.1| proteasome component C1 [Trichophyton equinum CBS 127.97]
Length = 201
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKLISSKLLKAG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|296805341|ref|XP_002843495.1| proteasome component C1 [Arthroderma otae CBS 113480]
gi|238844797|gb|EEQ34459.1| proteasome component C1 [Arthroderma otae CBS 113480]
Length = 313
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 34 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIISSKLLKPG-ANKRIATVDR 91
Query: 103 SLNIIT 108
++ I++
Sbjct: 92 NIGIVS 97
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 39 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 71
>gi|225716302|gb|ACO13997.1| Proteasome subunit alpha type-5 [Esox lucius]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|213511474|ref|NP_001134432.1| Proteasome subunit alpha type-5 [Salmo salar]
gi|209733218|gb|ACI67478.1| Proteasome subunit alpha type-5 [Salmo salar]
gi|303663916|gb|ADM16120.1| Proteasome subunit alpha type-5 [Salmo salar]
Length = 241
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|71746468|ref|XP_822289.1| proteasome subunit alpha 2 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|12229939|sp|Q9U793.1|PSA2_TRYBB RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
proteasome subunit alpha-2
gi|6224689|gb|AAF05906.1|AF148125_1 20S proteasome alpha 2 subunit [Trypanosoma brucei brucei]
gi|70831957|gb|EAN77461.1| proteasome alpha 2 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 231
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL Q+EYA A S T LG+ A DG+++AAEK+ T+ L D T K++ L
Sbjct: 10 TFSPS-GRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADS-LTLHKVFALD 67
Query: 102 D 102
D
Sbjct: 68 D 68
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL Q+EYA A S T LG+ A DG+++AAEK+
Sbjct: 16 RLVQIEYATTAASKGTTALGVKATDGVVIAAEKK 49
>gi|390604864|gb|EIN14255.1| proteasome subunit alpha type 5 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 242
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++L EKR+ S + H S +E ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGIKTPEGVVLGVEKRVQS--SLIEHAS----IEKIMEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNK 86
G + L D + R T++
Sbjct: 74 LGAAMSGLTADARTIIDHARVTSQ 97
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++L EKR + L++ + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTTVGIKTPEGVVLGVEKRVQSSLIEHASI-EKIMEI 70
>gi|388583715|gb|EIM24016.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 250
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGT 92
R++Q+EYA +A+ +AGT +GI +DG++LAA+K +KLL GT
Sbjct: 20 RIFQIEYANKAVENAGTVIGIRVKDGVILAAQKLLDSKLLVPGT 63
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 30/36 (83%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
R++Q+EYA +A+ +AGT +GI +DG++LAA+K L+
Sbjct: 20 RIFQIEYANKAVENAGTVIGIRVKDGVILAAQKLLD 55
>gi|358393693|gb|EHK43094.1| alpha subunit Pup2 of the 20S proteasome [Trichoderma atroviride
IMI 206040]
Length = 245
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLL-ETSSVEKIVEI 70
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +GI +G++L EKR+ S L S VE +E H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTS--SLLETSS----VEKIVEIDRH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLQAD 84
>gi|294659838|ref|XP_462266.2| DEHA2G16676p [Debaryomyces hansenii CBS767]
gi|199434271|emb|CAG90764.2| DEHA2G16676p [Debaryomyces hansenii CBS767]
Length = 279
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
N ++ P RL+QVEYA+EAI +G+++++ ++LAA KRN +L G+ +KI
Sbjct: 8 NDSVTYSP-TGRLFQVEYALEAIKQGSAAVGLVSKNHVVLAALKRNAEEL---GSYQKKI 63
Query: 98 YKLHDSLNI 106
K+ D + I
Sbjct: 64 IKVDDHMGI 72
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI +G+++++ ++LAA KR ++ + ++ +V+ H
Sbjct: 18 RLFQVEYALEAIKQGSAAVGLVSKNHVVLAALKRNAEELG--SYQKKIIKVD------DH 69
Query: 63 AGTCLGILAQDGILLA 78
G L LA DG +L+
Sbjct: 70 MGIALAGLAPDGRVLS 85
>gi|401625601|gb|EJS43601.1| pup2p [Saccharomyces arboricola H-6]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|171695490|ref|XP_001912669.1| hypothetical protein [Podospora anserina S mat+]
gi|170947987|emb|CAP60151.1| unnamed protein product [Podospora anserina S mat+]
Length = 293
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIVTSKLLKPG-ANKRIATVDR 72
Query: 103 SLNII 107
L ++
Sbjct: 73 HLGVV 77
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|389584728|dbj|GAB67460.1| 20S proteasome subunit alpha type 2 [Plasmodium cynomolgi strain B]
Length = 235
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P +L Q+EYA+ +S + LGI A++G+++A EK+N N+L++E + IYK+
Sbjct: 12 TFSP-TGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKNPNELIEENS----IYKIQ 66
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
+L Q+EYA+ +S + LGI A++G+++A EK+
Sbjct: 18 KLVQIEYALNRVSSSSPALGIRAKNGVIIATEKK 51
>gi|302500718|ref|XP_003012352.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
gi|291175910|gb|EFE31712.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
Length = 329
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 41 FSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
++F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 97 YTFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLL-ETSSVEKIVEI 154
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 104 RLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVT 139
>gi|358384785|gb|EHK22382.1| hypothetical protein TRIVIDRAFT_78893 [Trichoderma virens Gv29-8]
Length = 245
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLL-ETSSVEKIVEI 70
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +GI +G++L EKR+ S L S VE +E H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTS--SLLETSS----VEKIVEIDRH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLQAD 84
>gi|340521670|gb|EGR51904.1| non-peptidase proeosome, subunit alpha 5 [Trichoderma reesei QM6a]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E ++ EKI ++
Sbjct: 6 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLL-ETSSVEKIVEI 62
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +GI +G++L EKR+ S L S VE +E H
Sbjct: 12 RLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTS--SLLETSS----VEKIVEIDRH 65
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 66 IGCAMSGLQAD 76
>gi|326472784|gb|EGD96793.1| proteasome subunit alpha type-3 [Trichophyton tonsurans CBS 112818]
Length = 300
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKLISSKLLKAG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|430811305|emb|CCJ31228.1| unnamed protein product [Pneumocystis jirovecii]
Length = 239
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
RLYQVEYA+EAI T +G+ G+LL AEKR T+ L++ SEKI ++
Sbjct: 20 RLYQVEYAIEAIKLGATTMGLATPQGVLLGAEKRITSSLME--PLSEKIMEI 69
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA+EAI T +G+ G+LL AEKR+ S + +S E ME +H
Sbjct: 20 RLYQVEYAIEAIKLGATTMGLATPQGVLLGAEKRITS--SLMEPLS-----EKIMEIDTH 72
Query: 63 AGTCLGILAQDGILLA----AEKRNTNKLLDEGTTSEKI 97
G + L D +L E +N DE E +
Sbjct: 73 IGCSMSGLTADARILVDHARVESQNHRFTYDEPIGVESV 111
>gi|110668370|ref|YP_658181.1| proteasome subunit alpha [Haloquadratum walsbyi DSM 16790]
gi|109626117|emb|CAJ52569.1| proteasome alpha subunit [Haloquadratum walsbyi DSM 16790]
Length = 247
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA++ LGI G+++AA++R ++ L+ E + EK++KL +
Sbjct: 16 FSPD-GRIYQVEYAREAVNRGAPSLGIRTTGGVVIAAQRRTSSSLM-EAESIEKLHKLDE 73
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R+YQVEYA EA++ LGI G+++AA++R + + +L++++ + A S
Sbjct: 21 RIYQVEYAREAVNRGAPSLGIRTTGGVVIAAQRRTSSSLMEAESIEKLHKLDEYIGAAS 79
>gi|312258|emb|CAA46111.1| PUP2 [Saccharomyces cerevisiae]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|291398347|ref|XP_002715852.1| PREDICTED: proteasome alpha 5 subunit [Oryctolagus cuniculus]
Length = 241
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|166007290|pdb|2Z5C|C Chain C, Crystal Structure Of A Novel Chaperone Complex For Yeast
20s Proteasome Assembly
gi|166007293|pdb|2Z5C|F Chain F, Crystal Structure Of A Novel Chaperone Complex For Yeast
20s Proteasome Assembly
Length = 262
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 16 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 72
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 22 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 55
>gi|71023807|ref|XP_762133.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
gi|46101725|gb|EAK86958.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI +GI ++G++L EKR +KLL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLL-ESSSIEKIMEVD 71
Query: 102 DSLN 105
L
Sbjct: 72 QHLG 75
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEYA+EAI +GI ++G++L EKR+ S+L + +E ME
Sbjct: 20 RLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQ---------SKLLESSSIEKIMEV 70
Query: 60 ISHAGTCLGILAQDGILLAAEKRNTNK 86
H G + L D + R T++
Sbjct: 71 DQHLGAAMSGLTADARTMIEHARVTSQ 97
>gi|403072195|pdb|4G4S|E Chain E, Structure Of Proteasome-Pba1-Pba2 Complex
Length = 261
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 15 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 71
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 21 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 54
>gi|134084730|emb|CAK43387.1| unnamed protein product [Aspergillus niger]
Length = 274
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG 62
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE ++ +YK
Sbjct: 74 VGIVSAGLVPDGRHFVSRAR------DEASSWRSVYK 104
>gi|169845445|ref|XP_001829442.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
gi|116509507|gb|EAU92402.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
Length = 242
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR + LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTTVGIKTPEGVVLAVEKRVQSPLL-ESSSIEKIMEI 70
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ L S +E ME +H
Sbjct: 20 RLFQVEYAIEAIKLGSTTVGIKTPEGVVLAVEKRVQS--PLLESSS----IEKIMEIDTH 73
Query: 63 AGTCLGILAQDG 74
G + L D
Sbjct: 74 LGCAMSGLTADA 85
>gi|6321692|ref|NP_011769.1| proteasome core particle subunit alpha 5 [Saccharomyces cerevisiae
S288c]
gi|1709764|sp|P32379.2|PSA5_YEAST RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain subunit PUP2; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP2;
AltName: Full=Proteasome component PUP2; AltName:
Full=Proteinase YSCE subunit PUP2
gi|14488809|pdb|1FNT|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488823|pdb|1FNT|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765703|pdb|1Z7Q|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765717|pdb|1Z7Q|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847463|pdb|2ZCY|D Chain D, Yeast 20s Proteasome:syringolin A-Complex
gi|178847477|pdb|2ZCY|R Chain R, Yeast 20s Proteasome:syringolin A-Complex
gi|178847505|pdb|3BDM|D Chain D, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847519|pdb|3BDM|R Chain R, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462939|pdb|3NZJ|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462953|pdb|3NZJ|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462967|pdb|3NZW|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462981|pdb|3NZW|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462995|pdb|3NZX|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463009|pdb|3NZX|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|340780422|pdb|3OEU|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780436|pdb|3OEU|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780450|pdb|3OEV|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780464|pdb|3OEV|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|378792244|pdb|3UN4|D Chain D, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792258|pdb|3UN4|R Chain R, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792278|pdb|3UN8|D Chain D, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792292|pdb|3UN8|R Chain R, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980819|pdb|3SDI|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980833|pdb|3SDI|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980847|pdb|3SDK|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980861|pdb|3SDK|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|403071965|pdb|4B4T|E Chain E, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|444302342|pdb|4INR|D Chain D, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302356|pdb|4INR|R Chain R, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302370|pdb|4INT|D Chain D, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302384|pdb|4INT|R Chain R, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302398|pdb|4INU|D Chain D, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302412|pdb|4INU|R Chain R, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|1323460|emb|CAA97282.1| PUP2 [Saccharomyces cerevisiae]
gi|1502356|emb|CAA67615.1| PUP2 [Saccharomyces cerevisiae]
gi|45270912|gb|AAS56837.1| YGR253C [Saccharomyces cerevisiae]
gi|151943527|gb|EDN61838.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190406741|gb|EDV10008.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|256272662|gb|EEU07639.1| Pup2p [Saccharomyces cerevisiae JAY291]
gi|259146754|emb|CAY80011.1| Pup2p [Saccharomyces cerevisiae EC1118]
gi|285812444|tpg|DAA08344.1| TPA: proteasome core particle subunit alpha 5 [Saccharomyces
cerevisiae S288c]
gi|323304754|gb|EGA58514.1| Pup2p [Saccharomyces cerevisiae FostersB]
gi|323308926|gb|EGA62158.1| Pup2p [Saccharomyces cerevisiae FostersO]
gi|323333402|gb|EGA74798.1| Pup2p [Saccharomyces cerevisiae AWRI796]
gi|323337434|gb|EGA78684.1| Pup2p [Saccharomyces cerevisiae Vin13]
gi|323348494|gb|EGA82739.1| Pup2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354899|gb|EGA86732.1| Pup2p [Saccharomyces cerevisiae VL3]
gi|349578456|dbj|GAA23622.1| K7_Pup2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765500|gb|EHN07008.1| Pup2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299508|gb|EIW10602.1| Pup2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|322699150|gb|EFY90914.1| proteasome subunit alpha type 3 [Metarhizium acridum CQMa 102]
Length = 306
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVESGGTSIGIRCKDGVVLAVEKVVTSKLLKPG 62
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ GT +GI +DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVESGGTSIGIRCKDGVVLAVEK 52
>gi|327304519|ref|XP_003236951.1| hypothetical protein TERG_01675 [Trichophyton rubrum CBS 118892]
gi|326459949|gb|EGD85402.1| hypothetical protein TERG_01675 [Trichophyton rubrum CBS 118892]
Length = 300
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKLISSKLLKAG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|255732561|ref|XP_002551204.1| proteasome component C7-alpha [Candida tropicalis MYA-3404]
gi|240131490|gb|EER31050.1| proteasome component C7-alpha [Candida tropicalis MYA-3404]
Length = 281
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AI+ A T LGI +D ++ ++K+ +KLLD T S I+K+
Sbjct: 48 FSPE-GRLYQVEYAFKAINSANITSLGITGEDSAVIISQKKIPDKLLDPKTVS-YIFKIT 105
Query: 102 DSLNII 107
S+ ++
Sbjct: 106 PSIGMV 111
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRL 37
RLYQVEYA +AI+ A T LGI +D ++ ++K++
Sbjct: 53 RLYQVEYAFKAINSANITSLGITGEDSAVIISQKKI 88
>gi|298508226|pdb|1VSY|E Chain E, Proteasome Activator Complex
gi|298508240|pdb|1VSY|S Chain S, Proteasome Activator Complex
gi|298508442|pdb|3L5Q|J Chain J, Proteasome Activator Complex
gi|298508456|pdb|3L5Q|V Chain V, Proteasome Activator Complex
gi|333361175|pdb|3MG6|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361189|pdb|3MG6|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361203|pdb|3MG7|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361217|pdb|3MG7|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361231|pdb|3MG8|D Chain D, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361245|pdb|3MG8|R Chain R, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|6942053|gb|AAF32304.1| 20S proteasome alpha subunit 3 [Giardia intestinalis]
Length = 102
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 56 AMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
A++A++ A CL ILAQDGI+ A+K+ +KL D+ TSEKIYK+
Sbjct: 1 AIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQ-QTSEKIYKI 44
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 10 AMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGI 69
A++A++ A CL ILAQDGI+ A+K+L S ++Y+++ SH +
Sbjct: 1 AIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTSEKIYKID------SHIVCAVSG 54
Query: 70 LAQDGILLAAEKRN 83
L D +L E R
Sbjct: 55 LTSDANILIDEART 68
>gi|405971985|gb|EKC36784.1| Proteasome subunit alpha type-3 [Crassostrea gigas]
Length = 255
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R++QVEYA++A+ ++GT +GI +DG++ EK T+KL + G +++++ +
Sbjct: 15 FSPD-GRVFQVEYALKAVENSGTAVGIRGKDGVVFGVEKLVTSKLYEAG-ANKRLFNIDR 72
Query: 103 SLNIIT 108
+ I T
Sbjct: 73 HIGIAT 78
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R++QVEYA++A+ ++GT +GI +DG++ EK + RL+ ++
Sbjct: 20 RVFQVEYALKAVENSGTAVGIRGKDGVVFGVEKLVTSKLYEAGANKRLFNID 71
>gi|388857251|emb|CCF49093.1| probable PUP2-20S proteasome subunit (alpha5) [Ustilago hordei]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI +GI ++G++L EKR +KLL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLL-ESSSIEKIMEVD 71
Query: 102 DSLN 105
L
Sbjct: 72 QHLG 75
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEYA+EAI +GI ++G++L EKR+ S+L + +E ME
Sbjct: 20 RLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQ---------SKLLESSSIEKIMEV 70
Query: 60 ISHAGTCLGILAQDGILLAAEKRNTNK 86
H G + L D + R T++
Sbjct: 71 DQHLGAAMSGLTADARTMIEHARVTSQ 97
>gi|367044326|ref|XP_003652543.1| hypothetical protein THITE_2114167 [Thielavia terrestris NRRL 8126]
gi|346999805|gb|AEO66207.1| hypothetical protein THITE_2114167 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNII 107
L ++
Sbjct: 73 HLGVV 77
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 19 GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 52
>gi|3114273|pdb|1RYP|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114287|pdb|1RYP|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513416|pdb|1G65|D Chain D, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513430|pdb|1G65|R Chain R, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150380|pdb|1JD2|D Chain D, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150401|pdb|1JD2|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279371|pdb|2F16|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279385|pdb|2F16|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032205|pdb|2FAK|D Chain D, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032219|pdb|2FAK|R Chain R, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490846|pdb|2GPL|D Chain D, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490860|pdb|2GPL|R Chain R, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016370|pdb|3D29|D Chain D, Proteasome Inhibition By Fellutamide B
gi|190016384|pdb|3D29|R Chain R, Proteasome Inhibition By Fellutamide B
gi|197725324|pdb|3E47|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725338|pdb|3E47|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939215|pdb|3DY3|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939229|pdb|3DY3|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939243|pdb|3DY4|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939257|pdb|3DY4|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828240|pdb|3GPJ|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828254|pdb|3GPJ|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588324|pdb|3GPT|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588338|pdb|3GPT|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588352|pdb|3GPW|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588366|pdb|3GPW|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588546|pdb|3HYE|D Chain D, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588560|pdb|3HYE|R Chain R, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689384|pdb|3MG4|D Chain D, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689398|pdb|3MG4|R Chain R, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361147|pdb|3MG0|D Chain D, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361161|pdb|3MG0|R Chain R, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892344|pdb|3OKJ|D Chain D, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892358|pdb|3OKJ|R Chain R, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|350610675|pdb|3TDD|D Chain D, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610689|pdb|3TDD|R Chain R, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545849|pdb|3SHJ|D Chain D, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545863|pdb|3SHJ|R Chain R, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|402550735|pdb|4GK7|D Chain D, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550749|pdb|4GK7|R Chain R, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973863|pdb|4FZC|D Chain D, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973877|pdb|4FZC|R Chain R, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973891|pdb|4FZG|D Chain D, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973905|pdb|4FZG|R Chain R, 20s Yeast Proteasome In Complex With Glidobactin
Length = 242
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 6 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 62
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 12 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 45
>gi|167043476|gb|ABZ08173.1| putative Proteasome A-type and B-type [uncultured marine
microorganism HF4000_APKG2H5]
Length = 418
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSLNIIT 108
RLYQVEYA E++ T +G+ +DG++L +KR ++KL+ + EK+Y++ D + I T
Sbjct: 202 RLYQVEYARESVKRGTTTVGLKYRDGVVLIVDKRISSKLVIADSI-EKMYQIDDHIGITT 260
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA E++ T +G+ +DG++L +KR++ + ++YQ++ H
Sbjct: 202 RLYQVEYARESVKRGTTTVGLKYRDGVVLIVDKRISSKLVIADSIEKMYQID------DH 255
Query: 63 AGTCLGILAQDGILLAAEKR 82
G L D L R
Sbjct: 256 IGITTSGLVADARQLVERAR 275
>gi|145232021|ref|XP_001399476.1| proteasome subunit alpha type-5 [Aspergillus niger CBS 513.88]
gi|134056386|emb|CAK47620.1| unnamed protein product [Aspergillus niger]
gi|358365712|dbj|GAA82334.1| proteasome component PUP2 [Aspergillus kawachii IFO 4308]
Length = 246
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSSLL-EASSVEKIVEI 70
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +G+ +G++L EKR+ S L S VE +E H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTS--SLLEASS----VEKIVEIDQH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAMSGLQADARSLVEHAR 93
>gi|1041976|gb|AAB34631.1| Doa5, PUP2=alpha-type proteasome subunit zeta homolog
[Saccharomyces cerevisiae, Peptide, 243 aa]
Length = 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|11513995|pdb|1G0U|D Chain D, A Gated Channel Into The Proteasome Core Particle
gi|11514009|pdb|1G0U|R Chain R, A Gated Channel Into The Proteasome Core Particle
Length = 241
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|403411362|emb|CCL98062.1| predicted protein [Fibroporia radiculosa]
Length = 922
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 37 LNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEK 96
LN+ + RL+QVEYA+EAI T +G+ ++G++LA EKR + LL E ++ EK
Sbjct: 184 LNRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVKTKEGVVLAVEKRVQSPLL-ESSSIEK 242
Query: 97 IYKLHDSL 104
I ++ L
Sbjct: 243 IMEIDRHL 250
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +G+ ++G++LA EKR+ P + +E ME H
Sbjct: 196 RLFQVEYAIEAIKLGSTTVGVKTKEGVVLAVEKRVQS-----PLLES-SSIEKIMEIDRH 249
Query: 63 AGTCLGILAQDGILLAAEKRNTNK 86
G + L D + R T++
Sbjct: 250 LGCAMSGLTADARTMIDHARVTSQ 273
>gi|322371731|ref|ZP_08046274.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
gi|320548616|gb|EFW90287.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
Length = 252
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ + G++LA +K + L+++ T+ EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGSASIGVRTEGGVVLAVDKHTRSPLMEQ-TSVEKLHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
RLYQVEYA EA+ +G+ + G++LA +K
Sbjct: 21 GRLYQVEYAREAVKRGSASIGVRTEGGVVLAVDK 54
>gi|340374882|ref|XP_003385966.1| PREDICTED: proteasome subunit alpha type-5-like [Amphimedon
queenslandica]
Length = 242
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P R++QVEYA+EAI T +GI +G+++A EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRIFQVEYAIEAIKLGSTAVGIRTSEGVVMAVEKRITSPLM-EPSSVEKILEI 70
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA+EAI T +GI +G+++A EKR+ P M VE +E SH
Sbjct: 20 RIFQVEYAIEAIKLGSTAVGIRTSEGVVMAVEKRITS-----PLMEP-SSVEKILEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D + + R
Sbjct: 74 IGCAMSGLIADSRTMVDKAR 93
>gi|357133190|ref|XP_003568210.1| PREDICTED: proteasome subunit alpha type-3-like [Brachypodium
distachyon]
Length = 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT +GI +DGI+L EK T+K++ EG ++ +++ +H
Sbjct: 14 TFSPD-GRVFQVEYAGKAVDNSGTIVGIKCKDGIVLGVEKLITSKMILEG-SNRRLHSVH 71
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DGI+L EK + RL+ V +
Sbjct: 20 RVFQVEYAGKAVDNSGTIVGIKCKDGIVLGVEKLITSKMILEGSNRRLHSVH------RN 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + + ++ E EK+Y
Sbjct: 74 SGLAVAGLAADGRQIVSRAKS------EAANYEKVY 103
>gi|401412269|ref|XP_003885582.1| putative proteasome subunit alpha type 3 [Neospora caninum
Liverpool]
gi|325120001|emb|CBZ55554.1| putative proteasome subunit alpha type 3 [Neospora caninum
Liverpool]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++QVEYA +A+ ++G C+ ++ QDGIL A EK + LL
Sbjct: 14 TFSPD-GRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLL 59
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ ++G C+ ++ QDGIL A EK
Sbjct: 20 RVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEK 52
>gi|261331946|emb|CBH14939.1| proteasome alpha 2 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 265
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL Q+EYA A S T LG+ A DG+++AAEK+ T+ L D T K++ L
Sbjct: 44 TFSPS-GRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADS-LTLHKVFALD 101
Query: 102 D 102
D
Sbjct: 102 D 102
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL Q+EYA A S T LG+ A DG+++AAEK+
Sbjct: 50 RLVQIEYATTAASKGTTALGVKATDGVVIAAEKK 83
>gi|209875677|ref|XP_002139281.1| proteasome subunit alpha type 5 [Cryptosporidium muris RN66]
gi|209554887|gb|EEA04932.1| proteasome subunit alpha type 5, putative [Cryptosporidium muris
RN66]
Length = 255
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKI 97
+F P RL+QVEYAM A+ T +GI ++G++LA+E+R T+ LL E ++ EKI
Sbjct: 14 TFSPE-GRLFQVEYAMAAMKLGSTAVGIKTEEGVVLASERRITSTLL-EPSSVEKI 67
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAM A+ T +GI ++G++LA+E+R+ + L S VE M+ +H
Sbjct: 20 RLFQVEYAMAAMKLGSTAVGIKTEEGVVLASERRITS--TLLEPSS----VEKIMDIDTH 73
Query: 63 AGTCLGILAQDG 74
G C+ L D
Sbjct: 74 VGCCMSGLVADA 85
>gi|195430738|ref|XP_002063405.1| GK21413 [Drosophila willistoni]
gi|194159490|gb|EDW74391.1| GK21413 [Drosophila willistoni]
Length = 245
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGISTSEGVVLAVEKRITSSLMVPSTV-EKIVEVD 71
Query: 102 DSLNIIT 108
+ T
Sbjct: 72 KHIGCAT 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGISTSEGVVLAVEKRITSSLMVPSTVEKIVEVD 71
>gi|134037046|gb|ABO47863.1| threonine endopeptidase [Alexandrium fundyense]
Length = 254
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++QVEYA +A+ ++GT + I +DG++ A EK +K+L +G T+++I+ +H
Sbjct: 14 TFSPD-GRVFQVEYAQKAVENSGTTVAICCKDGVIFAVEKFLLSKMLVQG-TNKRIFPVH 71
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT + I +DG++ A EK L R++ V H
Sbjct: 20 RVFQVEYAQKAVENSGTTVAICCKDGVIFAVEKFLLSKMLVQGTNKRIFPVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRN 83
AG + + D + A R+
Sbjct: 74 AGMSIAGFSADSRQIVARARS 94
>gi|121715648|ref|XP_001275433.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
gi|119403590|gb|EAW14007.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 23 ILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 82
+A+ + ++ +N +F P RL+QVEY++EAI T +G+ +G++L EKR
Sbjct: 2 FIARSEYVFPTDRGIN---TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKR 57
Query: 83 NTNKLLDEGTTSEKIYKL 100
T+ LL E ++ EKI ++
Sbjct: 58 VTSTLL-EASSVEKIVEI 74
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 24 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 59
>gi|221481844|gb|EEE20214.1| 20S proteasome subunit alpha, putative [Toxoplasma gondii GT1]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++QVEYA +A+ ++G C+ ++ QDGIL A EK + LL
Sbjct: 14 TFSPD-GRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLL 59
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ ++G C+ ++ QDGIL A EK
Sbjct: 20 RVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEK 52
>gi|237843315|ref|XP_002370955.1| proteasome subunit alpha type 3, putative [Toxoplasma gondii
ME49]
gi|211968619|gb|EEB03815.1| proteasome subunit alpha type 3, putative [Toxoplasma gondii
ME49]
gi|221502343|gb|EEE28076.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P R++QVEYA +A+ ++G C+ ++ QDGIL A EK + LL
Sbjct: 14 TFSPD-GRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLL 59
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ ++G C+ ++ QDGIL A EK
Sbjct: 20 RVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEK 52
>gi|67539404|ref|XP_663476.1| hypothetical protein AN5872.2 [Aspergillus nidulans FGSC A4]
gi|40739191|gb|EAA58381.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259479965|tpe|CBF70666.1| TPA: alpha subunit of the 20S proteasome (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 246
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-EASSVEKIVEI 70
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 55
>gi|3914431|sp|O24362.1|PSA3_SPIOL RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
proteasome alpha subunit G; AltName: Full=20S proteasome
subunit alpha-7; AltName: Full=Proteasome component C8
gi|2285802|dbj|BAA21651.1| 26S proteasome alpha subunit [Spinacia oleracea]
Length = 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA +A+ ++GT +GI +DGI+L EK + R++ V H
Sbjct: 20 RVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPGSNRRIHSVH------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIY 98
+G + LA DG + A ++ E T E +Y
Sbjct: 74 SGMAVAGLAADGRQIVARAKS------EATNYESVY 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R++Q+EYA +A+ ++GT +GI +DGI+L EK +K++ G ++ +I+ +H
Sbjct: 14 TFSPD-GRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPG-SNRRIHSVH 71
>gi|51968292|dbj|BAD42871.1| 20S proteasome alpha5 subunit [Xenopus laevis]
Length = 241
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|385301310|gb|EIF45509.1| proteasome component pup2 [Dekkera bruxellensis AWRI1499]
Length = 265
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI G++LA EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGICTSQGVILAVEKRVTSPLL-ESDSVEKIMEV 70
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +GI G++LA EKR+ L S VE ME H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGICTSQGVILAVEKRVTS--PLLESDS----VEKIMEVEKH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGCAMSGLTAD 84
>gi|343427731|emb|CBQ71257.1| probable PUP2-20S proteasome subunit (alpha5) [Sporisorium
reilianum SRZ2]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI +GI ++G++L EKR +KLL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLL-ESSSIEKIMEVD 71
Query: 102 DSLN 105
L
Sbjct: 72 QHLG 75
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEYA+EAI +GI ++G++L EKR+ S+L + +E ME
Sbjct: 20 RLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQ---------SKLLESSSIEKIMEV 70
Query: 60 ISHAGTCLGILAQDGILLAAEKRNTNK 86
H G + L D + R T++
Sbjct: 71 DQHLGAAMSGLTADARTMIEHARVTSQ 97
>gi|448739379|ref|ZP_21721394.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
gi|445799974|gb|EMA50343.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
Length = 251
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++ A +KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRSPLM-ERESVEKMHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++ A +KR P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRS-----PLMER-ESVEKMHKADDH 75
Query: 63 AG 64
G
Sbjct: 76 IG 77
>gi|443899036|dbj|GAC76369.1| hypothetical protein PANT_20d00083 [Pseudozyma antarctica T-34]
Length = 272
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI +GI ++G++L EKR +KLL E ++ EKI ++
Sbjct: 19 TFSPE-GRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLL-ESSSIEKIMEVD 76
Query: 102 DSLN 105
L
Sbjct: 77 QHLG 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEYA+EAI +GI ++G++L EKR+ S+L + +E ME
Sbjct: 25 RLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQ---------SKLLESSSIEKIMEV 75
Query: 60 ISHAGTCLGILAQDGILLAAEKRNTNK 86
H G + L D + R T++
Sbjct: 76 DQHLGAAMSGLTADARTMIEHARVTSQ 102
>gi|320167332|gb|EFW44231.1| 20S proteasome subunit alpha V [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ LL T+ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRITSPLLVP-TSIEKIVEV 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ +V+
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRITSPLLVPTSIEKIVEVD 71
>gi|164661487|ref|XP_001731866.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
gi|159105767|gb|EDP44652.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI+ ++G +L EKR+ S L + S +E ME SH
Sbjct: 20 RLFQVEYALEAIKLGSTTVGIVTKEGAVLGVEKRVQS--SLLENSS----IEKIMEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNK 86
G + L D + R T++
Sbjct: 74 LGAAMSGLTADARTMIDHARVTSQ 97
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EAI T +GI+ ++G +L EKR + LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYALEAIKLGSTTVGIVTKEGAVLGVEKRVQSSLL-ENSSIEKIMEID 71
Query: 102 DSL 104
L
Sbjct: 72 SHL 74
>gi|254571635|ref|XP_002492927.1| Alpha 7 subunit of the 20S proteasome [Komagataella pastoris
GS115]
gi|238032725|emb|CAY70748.1| Alpha 7 subunit of the 20S proteasome [Komagataella pastoris
GS115]
Length = 257
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA +A+ +AGT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYASKAVENAGTSIGIKCRDGVVLAVEKIQTSKLLVAG 62
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA +A+ +AGT +GI +DG++LA EK R+ ++ H
Sbjct: 20 RNFQVEYASKAVENAGTSIGIKCRDGVVLAVEKIQTSKLLVAGRNKRIQSID------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G + DG + N+ DE + + +YK
Sbjct: 74 IGVAYSGIIPDG------RHFVNRGRDEAQSFKSLYK 104
>gi|328353063|emb|CCA39461.1| 20S proteasome subunit alpha 7 [Komagataella pastoris CBS 7435]
Length = 268
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA +A+ +AGT +GI +DG++LA EK T+KLL G
Sbjct: 26 FSPD-GRNFQVEYASKAVENAGTSIGIKCRDGVVLAVEKIQTSKLLVAG 73
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA +A+ +AGT +GI +DG++LA EK R+ ++ H
Sbjct: 31 RNFQVEYASKAVENAGTSIGIKCRDGVVLAVEKIQTSKLLVAGRNKRIQSID------RH 84
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G + DG + N+ DE + + +YK
Sbjct: 85 IGVAYSGIIPDG------RHFVNRGRDEAQSFKSLYK 115
>gi|448727266|ref|ZP_21709632.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
gi|445791480|gb|EMA42120.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
Length = 251
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++ A +KR + L+ E + EK++K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRSPLM-ERESVEKMHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++ A +KR P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRS-----PLMER-ESVEKMHKADDH 75
Query: 63 AG 64
G
Sbjct: 76 IG 77
>gi|168024960|ref|XP_001765003.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683812|gb|EDQ70219.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ ++GT +GI +DG++L EK ++ R++ V+ H
Sbjct: 20 RVFQVEYASKAVDNSGTVVGIKCKDGVVLGVEKLISSKMLLEGSNRRIHAVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRN 83
AG + LA DG + + R+
Sbjct: 74 AGMAMAGLASDGRQIVTKARS 94
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT 93
+F P R++QVEYA +A+ ++GT +GI +DG++L EK ++K+L EG+
Sbjct: 14 TFSPD-GRVFQVEYASKAVDNSGTVVGIKCKDGVVLGVEKLISSKMLLEGSN 64
>gi|401841976|gb|EJT44275.1| PUP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGISTKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGISTKEGVVLGVEKR 53
>gi|365760548|gb|EHN02263.1| Pup2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGISTKEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGISTKEGVVLGVEKR 53
>gi|294953367|ref|XP_002787728.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
50983]
gi|239902752|gb|EER19524.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
50983]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EA+ T +GI ++G++LA EKR + L+ E ++ EKI ++
Sbjct: 15 TFSPE-GRLFQVEYAIEAVKLGSTAIGITTKEGVVLAVEKRIGSPLI-EPSSIEKIMQI 71
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EA+ T +GI ++G++LA EKR+ + +E M+ H
Sbjct: 21 RLFQVEYAIEAVKLGSTAIGITTKEGVVLAVEKRIGSP------LIEPSSIEKIMQIAPH 74
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 75 VGCAMSGLTADARTLVDHAR 94
>gi|359843272|gb|AEV89771.1| proteasome subunit alpha [Schistocerca gregaria]
Length = 255
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R++QVEYA +A+ ++GT +G+ +DG++ A EK T+KL + G +++I+ +
Sbjct: 15 FSPD-GRVFQVEYAQKAVDNSGTVIGLRGKDGVVFAVEKLVTSKLYEPG-ANQRIFNI 70
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R++QVEYA +A+ ++GT +G+ +DG++ A EK
Sbjct: 20 RVFQVEYAQKAVDNSGTVIGLRGKDGVVFAVEK 52
>gi|367004056|ref|XP_003686761.1| hypothetical protein TPHA_0H01190 [Tetrapisispora phaffii CBS 4417]
gi|357525063|emb|CCE64327.1| hypothetical protein TPHA_0H01190 [Tetrapisispora phaffii CBS 4417]
Length = 260
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI ++G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLL-ESDSIEKILEI 70
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI ++G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKR 53
>gi|410920367|ref|XP_003973655.1| PREDICTED: proteasome subunit alpha type-5-like [Takifugu rubripes]
Length = 241
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|320032565|gb|EFW14517.1| proteasome component C1 [Coccidioides posadasii str. Silveira]
Length = 295
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK +++LL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVILAVEKIVSSRLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVILAVEK 52
>gi|47227266|emb|CAF96815.1| unnamed protein product [Tetraodon nigroviridis]
Length = 241
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|328850288|gb|EGF99454.1| hypothetical protein MELLADRAFT_73374 [Melampsora larici-populina
98AG31]
Length = 256
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T + + ++GI+L E+R+ +KLL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTTIAVTTKEGIILGVERRSQSKLL-ESSSIEKIMEI 70
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQ---VEYAMEA 59
RL+QVEYA+EAI T + + ++GI+L E+R S+L + +E ME
Sbjct: 20 RLFQVEYAIEAIKLGSTTIAVTTKEGIILGVERR---------SQSKLLESSSIEKIMEI 70
Query: 60 ISHAGTCLGILAQD 73
SH G + L D
Sbjct: 71 DSHVGCAVSGLVAD 84
>gi|315045620|ref|XP_003172185.1| hypothetical protein MGYG_04776 [Arthroderma gypseum CBS 118893]
gi|311342571|gb|EFR01774.1| hypothetical protein MGYG_04776 [Arthroderma gypseum CBS 118893]
Length = 309
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 23 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKLISSKLLKAG-ANKRIATVDR 80
Query: 103 SLNIIT 108
++ I++
Sbjct: 81 NVGIVS 86
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 28 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 60
>gi|238496413|ref|XP_002379442.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|317147200|ref|XP_001821944.2| proteasome subunit alpha type-5 [Aspergillus oryzae RIB40]
gi|220694322|gb|EED50666.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|391868879|gb|EIT78088.1| 20S proteasome, regulatory subunit alpha type PSMA5/PUP2
[Aspergillus oryzae 3.042]
Length = 246
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATNEGVILGVEKRVTSTLL-EASSVEKIVEI 70
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATNEGVILGVEKRV 54
>gi|119185089|ref|XP_001243364.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392866243|gb|EAS28854.2| proteasome component C1 [Coccidioides immitis RS]
Length = 295
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK +++LL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVILAVEKIVSSRLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVILAVEK 52
>gi|303313722|ref|XP_003066870.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106537|gb|EER24725.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 295
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK +++LL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTAIGIRCKDGVILAVEKIVSSRLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NIGIVS 78
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 20 RNFQVEYAVKAVENGGTAIGIRCKDGVILAVEK 52
>gi|344253923|gb|EGW10027.1| Sortilin [Cricetulus griseus]
Length = 1190
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 5 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 61
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 11 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 64
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 65 IGCAMSGLIADAKTLIDKAR 84
>gi|148233324|ref|NP_001085788.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
laevis]
gi|49118346|gb|AAH73346.1| MGC80760 protein [Xenopus laevis]
Length = 247
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLM-EPSSIEKIVEI 70
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|71001590|ref|XP_755476.1| proteasome component Pup2 [Aspergillus fumigatus Af293]
gi|66853114|gb|EAL93438.1| proteasome component Pup2, putative [Aspergillus fumigatus Af293]
gi|159129544|gb|EDP54658.1| proteasome component Pup2, putative [Aspergillus fumigatus A1163]
Length = 250
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 18 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-EASSVEKIVEI 74
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 24 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 59
>gi|308322205|gb|ADO28240.1| proteasome subunit alpha type-5 [Ictalurus furcatus]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|222480582|ref|YP_002566819.1| proteasome subunit alpha [Halorubrum lacusprofundi ATCC 49239]
gi|222453484|gb|ACM57749.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 268
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 17 FSPD-GRIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSRPSSTLM-EAESIEKLHKLDD 74
Query: 103 SLNIIT 108
L +
Sbjct: 75 HLGTAS 80
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
R+YQVEYA EA+S +G+ DG++ A R
Sbjct: 22 RIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSR 55
>gi|229367530|gb|ACQ58745.1| Proteasome subunit alpha type-5 [Anoplopoma fimbria]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|257388445|ref|YP_003178218.1| proteasome subunit alpha [Halomicrobium mukohataei DSM 12286]
gi|257170752|gb|ACV48511.1| Proteasome endopeptidase complex [Halomicrobium mukohataei DSM
12286]
Length = 250
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ G++LA +KR + L+ E ++ EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASIGVRTSGGVVLAVDKRIRSPLM-ERSSVEKIHKADD 74
Query: 103 SLNIIT 108
+ I +
Sbjct: 75 HIGIAS 80
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ G++LA +KR+ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASIGVRTSGGVVLAVDKRIRS-----PLMER-SSVEKIHKADDH 75
Query: 63 AG 64
G
Sbjct: 76 IG 77
>gi|318098723|ref|NP_001187839.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
gi|308324110|gb|ADO29190.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|448339327|ref|ZP_21528355.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
gi|445620556|gb|ELY74052.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
Length = 247
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA ++ ++ L+ E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSSPLM-ERESVEKIHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LAA ++++ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSS-----PLMER-ESVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 VGVA 79
>gi|348508050|ref|XP_003441568.1| PREDICTED: proteasome subunit alpha type-5-like [Oreochromis
niloticus]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|432859661|ref|XP_004069204.1| PREDICTED: proteasome subunit alpha type-5-like [Oryzias latipes]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPNSIEKIVEI 70
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-NSIEKIVEIDTH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|407921616|gb|EKG14757.1| Proteasome alpha-subunit conserved site [Macrophomina phaseolina
MS6]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA +A+ + GT +GI +DG++LA EK ++KLL +G +++I +
Sbjct: 15 FSPD-GRNFQVEYAQKAVENGGTAIGIRCKDGVVLALEKIVSSKLLKKG-ANKRIASVDR 72
Query: 103 SLNIIT 108
++ I++
Sbjct: 73 NMGIVS 78
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA +A+ + GT +GI +DG++LA EK ++ R+ V+ M +S
Sbjct: 20 RNFQVEYAQKAVENGGTAIGIRCKDGVVLALEKIVSSKLLKKGANKRIASVDRNMGIVSS 79
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
L DG + R DE K+YK
Sbjct: 80 G------LVPDGRHFVSRAR------DEAAQWRKLYK 104
>gi|255938979|ref|XP_002560259.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584881|emb|CAP82918.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 246
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-EASSVEKIVEI 70
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRV 54
>gi|154422376|ref|XP_001584200.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121918446|gb|EAY23214.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 240
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P R +QVEYA +A+ LG+ +DGILLAAEK T+ LL G + +I+ ++
Sbjct: 14 TFSPD-GRQFQVEYATKAVEKDSLALGVKCKDGILLAAEKNLTSTLLTPG-GNPRIFWIN 71
Query: 102 DSLNIIT 108
DS+ T
Sbjct: 72 DSIACAT 78
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE--YAMEAI 60
R +QVEYA +A+ LG+ +DGILLAAEK L R++ + A I
Sbjct: 20 RQFQVEYATKAVEKDSLALGVKCKDGILLAAEKNLTSTLLTPGGNPRIFWINDSIACATI 79
Query: 61 SHAGTCLGILAQ 72
H C I+ Q
Sbjct: 80 GHRPDCYSIVEQ 91
>gi|425781146|gb|EKV19128.1| Proteasome component Pup2, putative [Penicillium digitatum PHI26]
gi|425783177|gb|EKV21037.1| Proteasome component Pup2, putative [Penicillium digitatum Pd1]
Length = 246
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-EASSVEKIVEI 70
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRL 37
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRV 54
>gi|169769555|ref|XP_001819247.1| proteasome component C1 [Aspergillus oryzae RIB40]
gi|83767106|dbj|BAE57245.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 298
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA +A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAAKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA +A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAAKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE + +YK
Sbjct: 74 VGIVSAGLVPDGRHFVSRAR------DEAASWRSVYK 104
>gi|50302577|ref|XP_451224.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640355|emb|CAH02812.1| KLLA0A05093p [Kluyveromyces lactis]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G++ +GI+L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVVTNEGIVLGVEKRVTSALL-ESDSIEKIVEV 70
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEY++EAI T +G++ +GI+L EKR+ + L S +E +E +H
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVVTNEGIVLGVEKRVTS--ALLESDS----IEKIVEVDTH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 IGCAMSGLTAD 84
>gi|327284932|ref|XP_003227189.1| PREDICTED: proteasome subunit alpha type-3-like [Anolis
carolinensis]
Length = 255
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTT 93
+F P R++QVEYAM+A+ ++ T LGI +DG++ EK +KL +EG+
Sbjct: 14 TFSPD-GRVFQVEYAMKAVENSSTALGIRCKDGVVFGVEKLVLSKLYEEGSN 64
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYAM+A+ ++ T LGI +DG++ EK + RL+ V+ H
Sbjct: 20 RVFQVEYAMKAVENSSTALGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVD------RH 73
Query: 63 AGTCLGILAQDGILLA 78
G + L D LA
Sbjct: 74 VGMAVAGLLADARSLA 89
>gi|238488128|ref|XP_002375302.1| proteasome subunit alpha type 3, putative [Aspergillus flavus
NRRL3357]
gi|220700181|gb|EED56520.1| proteasome subunit alpha type 3, putative [Aspergillus flavus
NRRL3357]
Length = 298
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA +A+ + GT +GI +DG++LA EK T+KLL G +++I +
Sbjct: 15 FSPD-GRNFQVEYAAKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPG-ANKRIATVDR 72
Query: 103 SLNIIT 108
+ I++
Sbjct: 73 HVGIVS 78
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA +A+ + GT +GI +DG++LA EK + R+ V+ H
Sbjct: 20 RNFQVEYAAKAVENGGTAIGIRCKDGVVLAVEKIITSKLLKPGANKRIATVD------RH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
G L DG + R DE + +YK
Sbjct: 74 VGIVSAGLVPDGRHFVSRAR------DEAASWRSVYK 104
>gi|46123563|ref|XP_386335.1| hypothetical protein FG06159.1 [Gibberella zeae PH-1]
Length = 243
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 32 AAEKRLNQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
A+++ +N +F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E
Sbjct: 5 ASDRGIN---TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-ET 59
Query: 92 TTSEKIYKL 100
++ EKI ++
Sbjct: 60 SSVEKIVEI 68
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 18 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 53
>gi|440482940|gb|ELQ63385.1| proteasome component C1 [Magnaporthe oryzae P131]
Length = 435
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEK 96
R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G +
Sbjct: 148 RNFQVEYAVKAVENGGTSVGIRCKDGVVLAVEKVVTSKLLKPGANKRR 195
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 148 RNFQVEYAVKAVENGGTSVGIRCKDGVVLAVEK 180
>gi|403217921|emb|CCK72413.1| hypothetical protein KNAG_0K00450 [Kazachstania naganishii CBS
8797]
Length = 267
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGITTSEGVVLGVEKRATSPLL-ESDSIEKIVEI 70
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI +G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGITTSEGVVLGVEKR 53
>gi|383848759|ref|XP_003700015.1| PREDICTED: proteasome subunit alpha type-3-like [Megachile
rotundata]
Length = 254
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
F P R++QVEYA +A+ + GT +G+ +DG++ A EK T+KL E +T+++I+ +
Sbjct: 15 FSPD-GRVFQVEYAKKAVENGGTVIGLRGKDGVVFAVEKIVTSKLY-EPSTNKRIFNV 70
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++QVEYA +A+ + GT +G+ +DG++ A EK + R++ V+ H
Sbjct: 20 RVFQVEYAKKAVENGGTVIGLRGKDGVVFAVEKIVTSKLYEPSTNKRIFNVD------QH 73
Query: 63 AGTCLGILAQD 73
G + L D
Sbjct: 74 VGMAVSGLISD 84
>gi|321264506|ref|XP_003196970.1| proteasome subunit alpha type 5 [Cryptococcus gattii WM276]
gi|317463448|gb|ADV25183.1| Proteasome subunit alpha type 5, putative [Cryptococcus gattii
WM276]
Length = 277
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYAMEAI T +GI G +LA EKR + LL E ++ EKI ++
Sbjct: 48 TFSPE-GRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLL-ESSSIEKIMEI 104
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAMEAI T +GI G +LA EKR+ L S +E ME SH
Sbjct: 54 RLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPS--PLLESSS----IEKIMEIDSH 107
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL 87
G + L D + R T+++
Sbjct: 108 IGCAMSGLTADARTMVEHARVTSQM 132
>gi|405124145|gb|AFR98907.1| proteasome subunit alpha type 5 [Cryptococcus neoformans var.
grubii H99]
Length = 243
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYAMEAI T +GI G +LA EKR + LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLL-ESSSIEKIMEI 70
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAMEAI T +GI G +LA EKR+ L S +E ME SH
Sbjct: 20 RLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPS--PLLESSS----IEKIMEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL 87
G + L D + R T+++
Sbjct: 74 IGCAMSGLTADARTMVEHARVTSQM 98
>gi|384496638|gb|EIE87129.1| hypothetical protein RO3G_11840 [Rhizopus delemar RA 99-880]
Length = 269
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 43 FLPHMSRLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
F P RLYQVEYA +AIS++G T +G+ +DG ++ +++ +KLLD T + ++KL
Sbjct: 16 FSPE-GRLYQVEYAFKAISNSGITSVGVRGRDGCVIVTQRKVPDKLLDPSTITH-VFKLT 73
Query: 102 DSLNII 107
+ +
Sbjct: 74 PKIGCV 79
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 3 RLYQVEYAMEAISHAG-TCLGILAQDGILLAAEKRLNQ---DFSFLPHMSRL 50
RLYQVEYA +AIS++G T +G+ +DG ++ ++++ D S + H+ +L
Sbjct: 21 RLYQVEYAFKAISNSGITSVGVRGRDGCVIVTQRKVPDKLLDPSTITHVFKL 72
>gi|347826562|emb|CCD42259.1| similar to proteasome subunit alpha type-3 [Botryotinia
fuckeliana]
Length = 298
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSVGIKCKDGVVLAVEKVITSKLLKAG 62
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAIS 61
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ ++ M A+S
Sbjct: 19 GRNFQVEYAVKAVENGGTSVGIKCKDGVVLAVEKVITSKLLKAGANKRIATIDRHMGAVS 78
Query: 62 HAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
L DG + R DE + +YK
Sbjct: 79 SG------LVPDGRHFVSRAR------DEAASWRNVYK 104
>gi|89213678|gb|ABD64146.1| proteasome subunit alpha type 5 [Opisthorchis viverrini]
Length = 245
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLH 101
+F P RL+QVEYA+EA T +GI +GI+LA EKR N L ++ EKI+K+
Sbjct: 14 TFSPE-GRLFQVEYAIEATKLGSTGIGIKTPEGIVLAVEKR-VNSPLIVPSSIEKIFKVD 71
Query: 102 DSL 104
D +
Sbjct: 72 DHI 74
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
RL+QVEYA+EA T +GI +GI+LA EKR+N + ++++V+
Sbjct: 20 RLFQVEYAIEATKLGSTGIGIKTPEGIVLAVEKRVNSPLIVPSSIEKIFKVD 71
>gi|226292478|gb|EEH47898.1| proteasome component C1 [Paracoccidioides brasiliensis Pb18]
Length = 303
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R +QVEYA++A+ + GT +GI +DG++LA EK ++KLL G +++I +
Sbjct: 22 FSPD-GRNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEKIISSKLLKPG-ANKRISTVDK 79
Query: 103 SLNIIT 108
+ I++
Sbjct: 80 HIGIVS 85
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEK 35
R +QVEYA++A+ + GT +GI +DG++LA EK
Sbjct: 27 RNFQVEYAVKAVENGGTSIGIRCKDGVVLAVEK 59
>gi|448346435|ref|ZP_21535320.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
gi|445632638|gb|ELY85849.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
Length = 247
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA ++ ++ L+ E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSSPLM-ERESVEKIHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LAA ++++ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSS-----PLMER-ESVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 VGVA 79
>gi|58042495|gb|AAV66402.2| proteasome subunit alpha-type 5 [Macaca fascicularis]
Length = 210
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 49 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
RL+QVEYA+EAI T +GI +G+ LA EKR T+ L+ E ++ EKI ++
Sbjct: 4 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLM-EPSSIEKIVEI 54
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E +H
Sbjct: 4 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEKIVEIDAH 57
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 58 IGCAMSGLIADAKTLIDKAR 77
>gi|367022734|ref|XP_003660652.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
gi|347007919|gb|AEO55407.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
Length = 245
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSPLL-ETSSVEKIVEI 70
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 55
>gi|154308422|ref|XP_001553547.1| hypothetical protein BC1G_08271 [Botryotinia fuckeliana B05.10]
Length = 298
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEG 91
F P R +QVEYA++A+ + GT +GI +DG++LA EK T+KLL G
Sbjct: 15 FSPD-GRNFQVEYAVKAVENGGTSVGIKCKDGVVLAVEKVITSKLLKAG 62
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R +QVEYA++A+ + GT +GI +DG++LA EK + R+ ++ M A+S
Sbjct: 20 RNFQVEYAVKAVENGGTSVGIKCKDGVVLAVEKVITSKLLKAGANKRIATIDRHMGAVSS 79
Query: 63 AGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYK 99
L DG + R DE + +YK
Sbjct: 80 G------LVPDGRHFVSRAR------DEAASWRNVYK 104
>gi|119481163|ref|XP_001260610.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
gi|119408764|gb|EAW18713.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
Length = 252
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +G+ +G++L EKR T+ LL E ++ EKI ++
Sbjct: 20 TFSPE-GRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLL-EASSVEKIVEI 76
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLN 38
RL+QVEY++EAI T +G+ +G++L EKR+
Sbjct: 26 RLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVT 61
>gi|367016335|ref|XP_003682666.1| hypothetical protein TDEL_0G00880 [Torulaspora delbrueckii]
gi|359750329|emb|CCE93455.1| hypothetical protein TDEL_0G00880 [Torulaspora delbrueckii]
Length = 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEY++EAI T +GI +G++L EKR T+ LL E + EKI ++
Sbjct: 14 TFSPE-GRLFQVEYSLEAIKLGSTAIGIATSEGVVLGVEKRATSPLL-EADSIEKIVEV 70
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
RL+QVEY++EAI T +GI +G++L EKR
Sbjct: 20 RLFQVEYSLEAIKLGSTAIGIATSEGVVLGVEKR 53
>gi|332375765|gb|AEE63023.1| unknown [Dendroctonus ponderosae]
Length = 248
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLL 88
+F P RL+QVEYA+E + T +GI ++GI+LAAEKR +KLL
Sbjct: 14 TFSPE-GRLFQVEYAIETVKLGATSIGICTKEGIVLAAEKRLGSKLL 59
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+E + T +GI ++GI+LAAEKRL M ++ +V+ +
Sbjct: 20 RLFQVEYAIETVKLGATSIGICTKEGIVLAAEKRLGSKLLVNDSMDKISKVDTHI----- 74
Query: 63 AGTCLGILAQDGILL 77
A T G++A L+
Sbjct: 75 ASTFAGLIADSRTLV 89
>gi|197129876|gb|ACH46374.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
Length = 241
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSE 95
+F P RL+QVEYA+EAI T +GI +G+ LA EKR T+ L++ + E
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEE 66
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G+ LA EKR+ P M +E +E SH
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITS-----PLMEP-SSIEEIVEIDSH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L + R
Sbjct: 74 IGCAMSGLIADAKTLIDKAR 93
>gi|448464461|ref|ZP_21598474.1| proteasome subunit alpha [Halorubrum kocurii JCM 14978]
gi|445815573|gb|EMA65496.1| proteasome subunit alpha [Halorubrum kocurii JCM 14978]
Length = 257
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSRASSTLM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
L +
Sbjct: 74 HLGTAS 79
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R+YQVEYA EA+S +G+ DG++ A R + + +L++++
Sbjct: 20 GRIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSRASSTLMEAESIEKLHKLD 72
>gi|323451135|gb|EGB07013.1| hypothetical protein AURANDRAFT_37911 [Aureococcus
anophagefferens]
Length = 266
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 38 NQDFSFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKL 87
+ D + RL QVEYAMEA+ CLGI+ + ++LAA KR N+L
Sbjct: 7 DTDVTVWSPQGRLLQVEYAMEAVKQGSACLGIVGEGCVVLAALKRQPNEL 56
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFS 42
RL QVEYAMEA+ CLGI+ + ++LAA KR + S
Sbjct: 17 GRLLQVEYAMEAVKQGSACLGIVGEGCVVLAALKRQPNELS 57
>gi|262401167|gb|ACY66486.1| 20S proteasome alpha subunit [Scylla paramamosain]
Length = 103
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYA+EAI T +GI +G++LA EKR T+ L+ +T EKI ++
Sbjct: 14 TFSPE-GRLFQVEYAIEAIKLGSTAIGIQTGEGVVLAVEKRITSPLMIP-STIEKIVQI 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYA+EAI T +GI +G++LA EKR+ + ++ Q++ H
Sbjct: 20 RLFQVEYAIEAIKLGSTAIGIQTGEGVVLAVEKRITSPLMIPSTIEKIVQID------KH 73
Query: 63 AGTCLGILAQDGILLAAEKR 82
G + L D L R
Sbjct: 74 IGCAVSGLVADSRTLVDHAR 93
>gi|167518918|ref|XP_001743799.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777761|gb|EDQ91377.1| predicted protein [Monosiga brevicollis MX1]
Length = 256
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 50 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
L+QVEYA+EA+ T +GI +D ++LA E+R+ KL D T KI KL D
Sbjct: 18 LFQVEYALEAVRKGTTAVGIRGKDCVVLAVERRSAAKLQDTRTV-RKICKLDD 69
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKR 36
L+QVEYA+EA+ T +GI +D ++LA E+R
Sbjct: 18 LFQVEYALEAVRKGTTAVGIRGKDCVVLAVERR 50
>gi|397772626|ref|YP_006540172.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|448340250|ref|ZP_21529223.1| proteasome subunit alpha [Natrinema gari JCM 14663]
gi|397681719|gb|AFO56096.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|445630556|gb|ELY83817.1| proteasome subunit alpha [Natrinema gari JCM 14663]
Length = 247
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P RLYQVEYA EA+ +G+ DG++LAA ++ ++ L+ E + EKI+K D
Sbjct: 17 FSPD-GRLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSSPLM-ERESVEKIHKADD 74
Query: 103 SLNIIT 108
+ + +
Sbjct: 75 HVGVAS 80
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RLYQVEYA EA+ +G+ DG++LAA ++++ P M R VE +A H
Sbjct: 22 RLYQVEYAREAVKRGTASVGLRTSDGVVLAANRQVSS-----PLMER-ESVEKIHKADDH 75
Query: 63 AGTC 66
G
Sbjct: 76 VGVA 79
>gi|58270336|ref|XP_572324.1| proteasome subunit alpha type 5 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117764|ref|XP_772516.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255130|gb|EAL17869.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228582|gb|AAW45017.1| proteasome subunit alpha type 5, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 270
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 42 SFLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKL 100
+F P RL+QVEYAMEAI T +GI G +LA EKR + LL E ++ EKI ++
Sbjct: 41 TFSPE-GRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLL-ESSSIEKIMEI 97
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
RL+QVEYAMEAI T +GI G +LA EKR+ L S +E ME SH
Sbjct: 47 RLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPS--PLLESSS----IEKIMEIDSH 100
Query: 63 AGTCLGILAQDGILLAAEKRNTNKL 87
G + L D + R T+++
Sbjct: 101 IGCAMSGLTADARTMVEHARVTSQM 125
>gi|448440658|ref|ZP_21588736.1| proteasome subunit alpha [Halorubrum saccharovorum DSM 1137]
gi|445690044|gb|ELZ42265.1| proteasome subunit alpha [Halorubrum saccharovorum DSM 1137]
Length = 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 17 FSPD-GRIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSRASSTLM-EAESIEKLHKLDD 74
Query: 103 SLN 105
L
Sbjct: 75 HLG 77
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 2 SRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVE 54
R+YQVEYA EA+S +G+ DG++ A R + + +L++++
Sbjct: 21 GRIYQVEYAREAVSRGAPSVGVRTADGVVFVAMSRASSTLMEAESIEKLHKLD 73
>gi|399218631|emb|CCF75518.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 50 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHDSL 104
L QVEYA+EA+ G +G+ +D I+LAAEK+ +NKL + T++KI ++ D+L
Sbjct: 16 LLQVEYAIEAVRRGGCIVGVTGKDVIVLAAEKKVSNKLQNN-HTAKKILQIDDNL 69
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 4 LYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISHA 63
L QVEYA+EA+ G +G+ +D I+LAAEK+++ ++ Q++ + A+S A
Sbjct: 16 LLQVEYAIEAVRRGGCIVGVTGKDVIVLAAEKKVSNKLQNNHTAKKILQIDDNL-ALSFA 74
Query: 64 GTCLGILAQDGILLAAEKR 82
G L D +LA + R
Sbjct: 75 G-----LNADARVLANKAR 88
>gi|342183771|emb|CCC93250.1| 20S proteasome subunit alpha 5 [Trypanosoma congolense IL3000]
Length = 246
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R++Q+EYA+EAI T LGI + +++AAEKR+ ++++ ++++ H
Sbjct: 20 RIFQIEYAIEAIKLGSTSLGIWTPEAVIIAAEKRVPSTLVDPLSVNKILEIDH------H 73
Query: 63 AGTCL-GILAQDGILLA---AEKRNTNKLLDEGTTSE 95
GT L G++A GIL+ E +N DE + E
Sbjct: 74 IGTVLSGMVADAGILVEHARVEAQNHRFTYDEPMSVE 110
>gi|448425951|ref|ZP_21583059.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|448484981|ref|ZP_21606347.1| proteasome subunit alpha [Halorubrum arcis JCM 13916]
gi|445679912|gb|ELZ32365.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|445818674|gb|EMA68524.1| proteasome subunit alpha [Halorubrum arcis JCM 13916]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 43 FLPHMSRLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRNTNKLLDEGTTSEKIYKLHD 102
F P R+YQVEYA EA+S +G+ DG++ A R ++ L+ E + EK++KL D
Sbjct: 16 FSPD-GRIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLM-EAESIEKLHKLDD 73
Query: 103 SLNIIT 108
+ +
Sbjct: 74 HVGTAS 79
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 3 RLYQVEYAMEAISHAGTCLGILAQDGILLAAEKRLNQDFSFLPHMSRLYQVEYAMEAISH 62
R+YQVEYA EA+S +G+ DG++ A R + + +L++++ H
Sbjct: 21 RIYQVEYAREAVSRGAPSVGVRTTDGVVFVAMSRPSSSLMEAESIEKLHKLD------DH 74
Query: 63 AGTC 66
GT
Sbjct: 75 VGTA 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,521,665,080
Number of Sequences: 23463169
Number of extensions: 52299842
Number of successful extensions: 129160
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 522
Number of HSP's that attempted gapping in prelim test: 123457
Number of HSP's gapped (non-prelim): 6286
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)