Diaphorina citri psyllid: psy6597


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MTSQEISKDVFSYCTDTSDAKILSAAYQLFLKPVARLNISVQIPELKITGKSLSNYEVIEKIKYWAQPEEFSSLKVTKSTLEFVRLDGEIENRSKLLPVLARLDGRTIKLSGFADGLRVRATEAKPDFPTRHDWDSYFRDAKNMNEMKPGERPDTIYLSNLPVKWFSTKARPNQPSEAMLRRVFQNYGDIREVDIPINDPYRAQMKPYISGMTLFSHAQSLIFKTQLGKLPGTDHVTMFIQVDIISGMDYTTIIMLKASRKTSGGASKSMCVTYVVMCMAMEISALHALHLTLDHAMPLRKTVQV
cccHHHcccEEEECcccccccccccccccEEEcEEEEEEEEEccccccccccccHHHHHHHHHHHcccccccEEEEEcccccEEEEEEEcccHHcHHHHHHHccccEEEEccccccCEEEECcccccccccccHHHHHHHccccccccccccccEEEEccccccccccccccccccHHHHHHHHHcccccEECcccccccccccccccccccccccccccEEEEEEEcEEEccHHHHHHHHHHHHcccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
********DVFSYCTDTSDAKILSAAYQLFLKPVARLNISVQIPELKITGKSLSNYEVIEKIKYWAQPEEFSSLKVTKSTLEFVRLDGEIENRSKLLPVLARLDGRTIKLSGFADGLRVRATEAKPDFPTRHDWDSYF****************TIYLSNLPVKWFST*********AMLRRVFQNYGDIREVDIPINDPYRAQMKPYISGMTLFSHAQSLIFKTQLGKLPGTDHVTMFIQVDIISGMDYTTIIMLKAS********KSMCVTYVVMCMAMEISALHALHLTLDHAMPLRKTV**
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MTSQEISKDVFSYCTDTSDAKILSAAYQLFLKPVARLNISVQIPELKITGKSLSNYEVIEKIKYWAQPEEFSSLKVTKSTLEFVRLDGEIENRSKLLPVLARLDGRTIKLSGFADGLRVRATEAKPDFPTRHDWDSYFRDAKNMNEMKPGERPDTIYLSNLPVKWFSTKARPNQPSEAMLRRVFQNYGDIREVDIPINDPYRAQMKPYISGMTLFSHAQSLIFKTQLGKLPGTDHVTMFIQVDIISGMDYTTIIMLKASRKTSGGASKSMCVTYVVMCMAMEISALHALHLTLDHAMPLRKTVQV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
A-kinase anchor protein 17A Splice factor regulating alternative splice site selection for certain mRNA precursors. Mediates regulation of pre-mRNA splicing in a PKA-dependent manner.confidentQ02040

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016607 [CC]nuclear speckprobableGO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422
GO:0051018 [MF]protein kinase A bindingprobableGO:0003674, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A8X, chain A
Confidence level:confident
Coverage over the Query: 151-165,176-249
View the alignment between query and template
View the model in PyMOL
Template: 2YH0, chain A
Confidence level:probable
Coverage over the Query: 52-165,176-249
View the alignment between query and template
View the model in PyMOL
Template: 2J8A, chain A
Confidence level:probable
Coverage over the Query: 153-277
View the alignment between query and template
View the model in PyMOL