Your job contains 1 sequence.
>psy6599
MNVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL
KGHCPIDKTHRNQCRACRLNKCFMSAMNKDDFK
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6599
(93 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015381 - symbol:dsf "dissatisfaction" species:722... 437 1.1e-40 1
UNIPROTKB|Q6ZMP8 - symbol:NR2E1 "Nuclear receptor subfami... 356 1.4e-32 1
UNIPROTKB|F1RT26 - symbol:NR2E1 "Uncharacterized protein"... 356 1.4e-32 1
UNIPROTKB|Q91379 - symbol:NR2E1 "Nuclear receptor subfami... 350 6.0e-32 1
UNIPROTKB|F1MN68 - symbol:NR2E1 "Uncharacterized protein"... 350 6.0e-32 1
UNIPROTKB|F1PD89 - symbol:NR2E1 "Uncharacterized protein"... 350 6.0e-32 1
UNIPROTKB|Q9Y466 - symbol:NR2E1 "Nuclear receptor subfami... 350 6.0e-32 1
UNIPROTKB|I3LU21 - symbol:NR2E1 "Uncharacterized protein"... 350 6.0e-32 1
MGI|MGI:1100526 - symbol:Nr2e1 "nuclear receptor subfamil... 350 6.0e-32 1
ZFIN|ZDB-GENE-040801-127 - symbol:nr2e1 "nuclear receptor... 350 6.0e-32 1
UNIPROTKB|F1Q176 - symbol:NR2E1 "Uncharacterized protein"... 339 8.8e-31 1
FB|FBgn0003720 - symbol:tll "tailless" species:7227 "Dros... 313 5.0e-28 1
WB|WBGene00003657 - symbol:nhr-67 species:6239 "Caenorhab... 306 2.8e-27 1
UNIPROTKB|Q9XVV3 - symbol:nhr-67 "Nuclear hormone recepto... 306 2.8e-27 1
UNIPROTKB|F1P0M4 - symbol:NR2E3 "Uncharacterized protein"... 291 1.1e-25 1
ZFIN|ZDB-GENE-041114-63 - symbol:nr2e3 "nuclear receptor ... 286 4.1e-25 1
UNIPROTKB|F1ML62 - symbol:NR2E3 "Photoreceptor-specific n... 282 9.7e-25 1
UNIPROTKB|Q9TTF0 - symbol:NR2E3 "Photoreceptor-specific n... 282 9.7e-25 1
UNIPROTKB|Q9Y5X4 - symbol:NR2E3 "Photoreceptor-specific n... 282 9.7e-25 1
MGI|MGI:1346317 - symbol:Nr2e3 "nuclear receptor subfamil... 282 9.7e-25 1
UNIPROTKB|F1SIS0 - symbol:F1SIS0 "Uncharacterized protein... 282 1.0e-24 1
ZFIN|ZDB-GENE-990415-253 - symbol:nr2f5 "nuclear receptor... 267 4.6e-23 1
WB|WBGene00001400 - symbol:fax-1 species:6239 "Caenorhabd... 267 6.4e-23 1
FB|FBgn0034012 - symbol:Hr51 "Hormone receptor 51" specie... 270 1.2e-22 1
WB|WBGene00021417 - symbol:nhr-236 species:6239 "Caenorha... 262 1.3e-22 1
MGI|MGI:1352453 - symbol:Nr2f6 "nuclear receptor subfamil... 259 3.0e-22 1
UNIPROTKB|P10588 - symbol:NR2F6 "Nuclear receptor subfami... 259 4.1e-22 1
UNIPROTKB|F1N3S3 - symbol:NR2F6 "Uncharacterized protein"... 259 4.8e-22 1
UNIPROTKB|F1S962 - symbol:NR2F6 "Uncharacterized protein"... 259 4.9e-22 1
UNIPROTKB|E2R3D0 - symbol:NR2F6 "Uncharacterized protein"... 259 5.1e-22 1
ZFIN|ZDB-GENE-030131-4362 - symbol:nr2f6a "nuclear recept... 258 5.3e-22 1
UNIPROTKB|E9PSV4 - symbol:Hnf4a "Hepatocyte nuclear facto... 256 5.5e-22 1
UNIPROTKB|F1M5T7 - symbol:Hnf4a "Hepatocyte nuclear facto... 256 5.5e-22 1
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 256 6.9e-22 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 256 6.9e-22 1
ZFIN|ZDB-GENE-980526-115 - symbol:nr2f1a "nuclear recepto... 256 1.0e-21 1
UNIPROTKB|F1NZ15 - symbol:HNF4A "Uncharacterized protein"... 258 1.1e-21 1
MGI|MGI:109128 - symbol:Hnf4a "hepatic nuclear factor 4, ... 256 2.1e-21 1
RGD|2810 - symbol:Hnf4a "hepatocyte nuclear factor 4, alp... 256 2.1e-21 1
UNIPROTKB|G3V750 - symbol:Hnf4a "Hepatocyte nuclear facto... 256 2.1e-21 1
ZFIN|ZDB-GENE-040426-2351 - symbol:nr2f6b "nuclear recept... 253 2.1e-21 1
UNIPROTKB|Q7YRQ5 - symbol:HNF4A "Uncharacterized protein"... 254 3.0e-21 1
UNIPROTKB|Q90733 - symbol:NR2F2 "COUP transcription facto... 252 3.0e-21 1
UNIPROTKB|E2R9S0 - symbol:HNF4A "Uncharacterized protein"... 254 3.5e-21 1
UNIPROTKB|P41235 - symbol:HNF4A "Hepatocyte nuclear facto... 254 3.5e-21 1
UNIPROTKB|Q1I181 - symbol:HNF4A "Uncharacterized protein"... 254 3.5e-21 1
UNIPROTKB|E1C7C2 - symbol:HNF4G "Uncharacterized protein"... 250 8.2e-21 1
UNIPROTKB|F2Z3S9 - symbol:Nr2f1 "Protein Nr2f1" species:1... 248 9.6e-21 1
UNIPROTKB|F1RNX7 - symbol:NR2F1 "Uncharacterized protein"... 248 9.9e-21 1
MGI|MGI:1352451 - symbol:Nr2f1 "nuclear receptor subfamil... 248 9.9e-21 1
UNIPROTKB|P10589 - symbol:NR2F1 "COUP transcription facto... 248 1.0e-20 1
UNIPROTKB|Q9TTR8 - symbol:NR2F1 "COUP transcription facto... 248 1.0e-20 1
ZFIN|ZDB-GENE-990415-252 - symbol:nr2f2 "nuclear receptor... 248 1.1e-20 1
UNIPROTKB|E2QW41 - symbol:NR2F2 "Uncharacterized protein"... 246 1.1e-20 1
UNIPROTKB|Q9TTR7 - symbol:NR2F2 "COUP transcription facto... 246 1.5e-20 1
UNIPROTKB|P24468 - symbol:NR2F2 "COUP transcription facto... 246 1.5e-20 1
UNIPROTKB|F1SCJ6 - symbol:NR2F2 "Uncharacterized protein"... 246 1.5e-20 1
MGI|MGI:1352452 - symbol:Nr2f2 "nuclear receptor subfamil... 246 1.5e-20 1
RGD|69305 - symbol:Nr2f2 "nuclear receptor subfamily 2, g... 246 1.5e-20 1
UNIPROTKB|O09018 - symbol:Nr2f2 "COUP transcription facto... 246 1.5e-20 1
UNIPROTKB|F1PX81 - symbol:NR2F2 "Uncharacterized protein"... 246 1.6e-20 1
UNIPROTKB|F1N056 - symbol:NR2F1 "COUP transcription facto... 242 1.7e-20 1
ZFIN|ZDB-GENE-040426-1438 - symbol:nr2f1b "nuclear recept... 244 1.8e-20 1
UNIPROTKB|E1BS38 - symbol:HNF4beta "Uncharacterized prote... 247 1.8e-20 1
UNIPROTKB|F1N848 - symbol:HNF4beta "Uncharacterized prote... 247 1.8e-20 1
ZFIN|ZDB-GENE-030131-1077 - symbol:hnf4a "hepatocyte nucl... 247 1.9e-20 1
UNIPROTKB|F1MGG2 - symbol:HNF4G "Uncharacterized protein"... 244 2.9e-20 1
UNIPROTKB|Q14541 - symbol:HNF4G "Hepatocyte nuclear facto... 242 4.0e-20 1
WB|WBGene00006790 - symbol:unc-55 species:6239 "Caenorhab... 239 4.8e-20 1
UNIPROTKB|F1N2D7 - symbol:HNF4G "Uncharacterized protein"... 241 5.2e-20 1
MGI|MGI:1353604 - symbol:Hnf4g "hepatocyte nuclear factor... 241 5.2e-20 1
ZFIN|ZDB-GENE-060929-100 - symbol:hnf4g "hepatocyte nucle... 242 6.5e-20 1
UNIPROTKB|E2R9K8 - symbol:HNF4G "Uncharacterized protein"... 242 6.7e-20 1
UNIPROTKB|P51129 - symbol:rxrg "Retinoic acid receptor RX... 242 7.1e-20 1
UNIPROTKB|E2RGP7 - symbol:RORC "Uncharacterized protein" ... 243 7.4e-20 1
UNIPROTKB|F1P101 - symbol:F1P101 "Uncharacterized protein... 235 9.2e-20 1
WB|WBGene00003603 - symbol:nhr-4 species:6239 "Caenorhabd... 241 1.1e-19 1
UNIPROTKB|Q0VC20 - symbol:RXRG "Retinoic acid receptor RX... 240 1.1e-19 1
UNIPROTKB|P48443 - symbol:RXRG "Retinoic acid receptor RX... 240 1.1e-19 1
UNIPROTKB|Q0GFF6 - symbol:RXRG "Retinoic acid receptor RX... 240 1.1e-19 1
MGI|MGI:98216 - symbol:Rxrg "retinoid X receptor gamma" s... 240 1.1e-19 1
RGD|620046 - symbol:Rxrg "retinoid X receptor gamma" spec... 240 1.1e-19 1
UNIPROTKB|B7Z3E4 - symbol:RXRB "Retinoic acid receptor RX... 234 1.2e-19 1
UNIPROTKB|E9PK95 - symbol:RXRB "Retinoic acid receptor RX... 234 1.2e-19 1
UNIPROTKB|P51449 - symbol:RORC "Nuclear receptor ROR-gamm... 241 1.2e-19 1
FB|FBgn0004914 - symbol:Hnf4 "Hepatocyte nuclear factor 4... 243 1.3e-19 1
ZFIN|ZDB-GENE-040718-34 - symbol:rxrgb "retinoid X recept... 239 1.4e-19 1
ZFIN|ZDB-GENE-030131-2730 - symbol:hnf4b "hepatic nuclear... 239 1.5e-19 1
UNIPROTKB|H0YLS5 - symbol:RORA "Nuclear receptor ROR-alph... 233 1.5e-19 1
UNIPROTKB|H7BYJ4 - symbol:RORC "Nuclear receptor ROR-gamm... 241 1.6e-19 1
FB|FBgn0003651 - symbol:svp "seven up" species:7227 "Dros... 243 1.6e-19 1
UNIPROTKB|B3KY83 - symbol:RXRA "cDNA FLJ16020 fis, clone ... 234 1.7e-19 1
ZFIN|ZDB-GENE-990415-243 - symbol:rxrab "retinoid x recep... 235 1.7e-19 1
UNIPROTKB|F1LNV3 - symbol:F1LNV3 "Uncharacterized protein... 239 1.7e-19 1
UNIPROTKB|E2RD69 - symbol:RXRG "Uncharacterized protein" ... 238 1.9e-19 1
UNIPROTKB|F1N7B3 - symbol:RORC "Uncharacterized protein" ... 239 1.9e-19 1
UNIPROTKB|F1NSP3 - symbol:RXRG "Retinoic acid receptor RX... 238 1.9e-19 1
UNIPROTKB|P28701 - symbol:RXRG "Retinoic acid receptor RX... 238 1.9e-19 1
UNIPROTKB|K7GLR7 - symbol:RXRG "Retinoic acid receptor RX... 232 1.9e-19 1
RGD|1595785 - symbol:Rorc "RAR-related orphan receptor C"... 239 1.9e-19 1
WARNING: Descriptions of 809 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015381 [details] [associations]
symbol:dsf "dissatisfaction" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0018993
"somatic sex determination" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0007530 "sex determination" evidence=TAS]
[GO:0007619 "courtship behavior" evidence=NAS;TAS] [GO:0007617
"mating behavior" evidence=NAS] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA;NAS] [GO:0007620 "copulation"
evidence=NAS] [GO:0018991 "oviposition" evidence=NAS;TAS]
[GO:0045924 "regulation of female receptivity" evidence=NAS]
[GO:0008049 "male courtship behavior" evidence=TAS] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0048047 "mating
behavior, sex discrimination" evidence=TAS] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0018991
GO:GO:0046872 GO:GO:0004879 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045924 GO:GO:0008049 GO:GO:0035206
GO:GO:0048047 GO:GO:0007620 GO:GO:0018993 HSSP:P19793 EMBL:AF106677
ProteinModelPortal:O96680 SMR:O96680 STRING:O96680 PRIDE:O96680
FlyBase:FBgn0015381 eggNOG:NOG242640 InParanoid:O96680
OrthoDB:EOG4MW6NV ArrayExpress:O96680 Bgee:O96680 Uniprot:O96680
Length = 693
Score = 437 (158.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 75/81 (92%), Positives = 77/81 (95%)
Query: 10 GDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKT 69
GDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNR+YTCKA GDLKG CP+DKT
Sbjct: 5 GDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKT 64
Query: 70 HRNQCRACRLNKCFMSAMNKD 90
HRNQCRACRL KCF SAMNKD
Sbjct: 65 HRNQCRACRLAKCFQSAMNKD 85
>UNIPROTKB|Q6ZMP8 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2, group E, member
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 EMBL:CH471051 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:AL078596 UniGene:Hs.157688 HGNC:HGNC:7973
OMA:ILLEDAW HSSP:P20393 EMBL:AK131541 IPI:IPI00000354 SMR:Q6ZMP8
STRING:Q6ZMP8 Ensembl:ENST00000368983 Uniprot:Q6ZMP8
Length = 422
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 63/83 (75%), Positives = 70/83 (84%)
Query: 8 SLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPID 67
S G R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+D
Sbjct: 43 SPGGRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVD 100
Query: 68 KTHRNQCRACRLNKCFMSAMNKD 90
KTHRNQCRACRL KC MNKD
Sbjct: 101 KTHRNQCRACRLKKCLEVNMNKD 123
>UNIPROTKB|F1RT26 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:CU469092 Ensembl:ENSSSCT00000004846
Uniprot:F1RT26
Length = 421
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 63/83 (75%), Positives = 70/83 (84%)
Query: 8 SLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPID 67
SL R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+D
Sbjct: 42 SLESRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVD 99
Query: 68 KTHRNQCRACRLNKCFMSAMNKD 90
KTHRNQCRACRL KC MNKD
Sbjct: 100 KTHRNQCRACRLKKCLEVNMNKD 122
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|I3LU21 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:CU469092
RefSeq:XP_003353327.1 ProteinModelPortal:I3LU21
Ensembl:ENSSSCT00000022342 GeneID:100155153 KEGG:ssc:100155153
Uniprot:I3LU21
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>MGI|MGI:1100526 [details] [associations]
symbol:Nr2e1 "nuclear receptor subfamily 2, group E, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0001662 "behavioral fear response" evidence=IMP] [GO:0002118
"aggressive behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007610
"behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021764
"amygdala development" evidence=IMP] [GO:0021772 "olfactory bulb
development" evidence=IMP] [GO:0021819 "layer formation in cerebral
cortex" evidence=IMP] [GO:0021872 "forebrain generation of neurons"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0045766 "positive
regulation of angiogenesis" evidence=IMP] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IMP] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IMP] [GO:0051128 "regulation of cellular component
organization" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060164 "regulation of timing of
neuron differentiation" evidence=IMP] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0090049 "regulation of
cell migration involved in sprouting angiogenesis" evidence=IMP]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1100526 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0003677 GO:GO:0060291
GO:GO:0007601 GO:GO:0001078 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045665 GO:GO:0045766 GO:GO:0001077
GO:GO:0048814 GO:GO:0060041 GO:GO:0035176 GO:GO:0035019
GO:GO:0001662 GO:GO:0045165 GO:GO:0008347 GO:GO:0045787
GO:GO:2000179 GO:GO:0048712 GO:GO:0021960 GO:GO:0021542
GO:GO:2000178 GO:GO:0002118 GO:GO:0021772 GO:GO:0021819
HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895
GO:GO:0060164 eggNOG:NOG277339 KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 EMBL:S77482 EMBL:BC057104
IPI:IPI00131076 RefSeq:NP_689415.1 UniGene:Mm.287100
ProteinModelPortal:Q64104 SMR:Q64104 DIP:DIP-46432N STRING:Q64104
PhosphoSite:Q64104 PRIDE:Q64104 Ensembl:ENSMUST00000019938
GeneID:21907 KEGG:mmu:21907 InParanoid:Q64104 OMA:ILLEDAW
NextBio:301450 Bgee:Q64104 CleanEx:MM_NR2E1 Genevestigator:Q64104
GermOnline:ENSMUSG00000019803 Uniprot:Q64104
Length = 385
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 12 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHR 71
R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHR
Sbjct: 10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHR 67
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 68 NQCRACRLKKCLEVNMNKD 86
>ZFIN|ZDB-GENE-040801-127 [details] [associations]
symbol:nr2e1 "nuclear receptor subfamily 2, group
E, member 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040801-127 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GeneTree:ENSGT00700000104390 eggNOG:NOG277339
KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q OMA:ILLEDAW EMBL:CU138515
EMBL:BC077146 EMBL:EF010862 IPI:IPI00504614 RefSeq:NP_001003608.1
UniGene:Dr.78647 STRING:Q6DEH0 Ensembl:ENSDART00000026635
GeneID:445214 KEGG:dre:445214 NextBio:20831976 Uniprot:Q6DEH0
Length = 396
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 62/84 (73%), Positives = 68/84 (80%)
Query: 7 NSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPI 66
N R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G +G CP+
Sbjct: 16 NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GT-QGGCPV 73
Query: 67 DKTHRNQCRACRLNKCFMSAMNKD 90
DKTHRNQCRACRL KC MNKD
Sbjct: 74 DKTHRNQCRACRLKKCLEVNMNKD 97
>UNIPROTKB|F1Q176 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:AAEX03008592
Ensembl:ENSCAFT00000035327 Uniprot:F1Q176
Length = 412
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 59/76 (77%), Positives = 65/76 (85%)
Query: 15 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQC 74
DIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI RNR Y CK+ G+ +G CP+DKTHRNQC
Sbjct: 35 DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS-GN-QGGCPVDKTHRNQC 92
Query: 75 RACRLNKCFMSAMNKD 90
RACRL KC MNKD
Sbjct: 93 RACRLKKCLEVNMNKD 108
>FB|FBgn0003720 [details] [associations]
symbol:tll "tailless" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI;TAS] [GO:0007362
"terminal region determination" evidence=IGI;NAS;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0045165 "cell fate
commitment" evidence=IMP] [GO:0001748 "optic lobe placode
development" evidence=IMP] [GO:0009948 "anterior/posterior axis
specification" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] [GO:0007369 "gastrulation"
evidence=NAS] [GO:0001708 "cell fate specification" evidence=TAS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0003677
"DNA binding" evidence=IDA;NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=TAS] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0035271 "ring gland development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0055057
"neuroblast division" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0003677 GO:GO:0008293 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003705
GO:GO:0051726 GO:GO:0007369 GO:GO:0001746 GO:GO:0001748
GO:GO:0007362 GO:GO:0035271 GeneTree:ENSGT00700000104390
eggNOG:NOG277339 KO:K08545 OMA:ILLEDAW GO:GO:0055057 EMBL:M34639
EMBL:AF019362 EMBL:BT022195 PIR:A35602 RefSeq:NP_524596.1
UniGene:Dm.1906 ProteinModelPortal:P18102 SMR:P18102 DIP:DIP-19302N
IntAct:P18102 MINT:MINT-300240 STRING:P18102 PRIDE:P18102
EnsemblMetazoa:FBtr0085709 GeneID:43656 KEGG:dme:Dmel_CG1378
UCSC:CG1378-RA CTD:43656 FlyBase:FBgn0003720 InParanoid:P18102
OrthoDB:EOG4PRR6T PhylomeDB:P18102 GenomeRNAi:43656 NextBio:835100
Bgee:P18102 GermOnline:CG1378 Uniprot:P18102
Length = 452
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 55/78 (70%), Positives = 62/78 (79%)
Query: 13 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRN 72
L +PCKVC D SSGKHYGIY+CDGC+GFFKRSI R+R Y CK+Q +G C +DKTHRN
Sbjct: 29 LYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQK--QGLCVVDKTHRN 86
Query: 73 QCRACRLNKCFMSAMNKD 90
QCRACRL KCF MNKD
Sbjct: 87 QCRACRLRKCFEVGMNKD 104
>WB|WBGene00003657 [details] [associations]
symbol:nhr-67 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0035262 "gonad morphogenesis" evidence=IMP] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0008340 GO:GO:0040010 GO:GO:0016477 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040018
GO:GO:0003700 GO:GO:0006351 GO:GO:0040035 GO:GO:0035262
GeneTree:ENSGT00700000104390 EMBL:Z73103 eggNOG:NOG277339
PIR:T19102 RefSeq:NP_502094.1 ProteinModelPortal:Q9XVV3 SMR:Q9XVV3
DIP:DIP-25535N IntAct:Q9XVV3 MINT:MINT-1049427 STRING:Q9XVV3
EnsemblMetazoa:C08F8.8 GeneID:178024 KEGG:cel:CELE_C08F8.8
UCSC:C08F8.8 CTD:178024 WormBase:C08F8.8 HOGENOM:HOG000017978
InParanoid:Q9XVV3 KO:K08545 OMA:NSPEMGS NextBio:899406
ArrayExpress:Q9XVV3 Uniprot:Q9XVV3
Length = 416
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 13 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGD-LKGHCPIDKTHR 71
LLD+ C+VC D SSGKHY I+SCDGC+GFFKRSI R+R Y CK +G +G C +DKTHR
Sbjct: 16 LLDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHR 75
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 76 NQCRACRLRKCLEIGMNKD 94
>UNIPROTKB|Q9XVV3 [details] [associations]
symbol:nhr-67 "Nuclear hormone receptor family member
nhr-67" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0008340
GO:GO:0040010 GO:GO:0016477 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040018 GO:GO:0003700
GO:GO:0006351 GO:GO:0040035 GO:GO:0035262
GeneTree:ENSGT00700000104390 EMBL:Z73103 eggNOG:NOG277339
PIR:T19102 RefSeq:NP_502094.1 ProteinModelPortal:Q9XVV3 SMR:Q9XVV3
DIP:DIP-25535N IntAct:Q9XVV3 MINT:MINT-1049427 STRING:Q9XVV3
EnsemblMetazoa:C08F8.8 GeneID:178024 KEGG:cel:CELE_C08F8.8
UCSC:C08F8.8 CTD:178024 WormBase:C08F8.8 HOGENOM:HOG000017978
InParanoid:Q9XVV3 KO:K08545 OMA:NSPEMGS NextBio:899406
ArrayExpress:Q9XVV3 Uniprot:Q9XVV3
Length = 416
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 53/79 (67%), Positives = 61/79 (77%)
Query: 13 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGD-LKGHCPIDKTHR 71
LLD+ C+VC D SSGKHY I+SCDGC+GFFKRSI R+R Y CK +G +G C +DKTHR
Sbjct: 16 LLDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHR 75
Query: 72 NQCRACRLNKCFMSAMNKD 90
NQCRACRL KC MNKD
Sbjct: 76 NQCRACRLRKCLEIGMNKD 94
>UNIPROTKB|F1P0M4 [details] [associations]
symbol:NR2E3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0045872 "positive regulation of
rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0030522 OMA:MLSQHTK EMBL:AADN02051066 IPI:IPI00600137
Ensembl:ENSGALT00000003264 Uniprot:F1P0M4
Length = 405
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 50/73 (68%), Positives = 58/73 (79%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
CKVCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+A G G CP+DK HRNQC+AC
Sbjct: 35 CKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQA-GT--GLCPVDKAHRNQCQAC 91
Query: 78 RLNKCFMSAMNKD 90
RL KC + MNKD
Sbjct: 92 RLKKCLQAGMNKD 104
>ZFIN|ZDB-GENE-041114-63 [details] [associations]
symbol:nr2e3 "nuclear receptor subfamily 2, group E,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL929050
IPI:IPI00511770 ProteinModelPortal:F1QGF3
Ensembl:ENSDART00000127099 ArrayExpress:F1QGF3 Bgee:F1QGF3
Uniprot:F1QGF3
Length = 426
Score = 286 (105.7 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 49/73 (67%), Positives = 57/73 (78%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
CKVC D SSGKHYGIY+C+GCSGFFKRS+ R +Y C+A G G CP+DK HRNQC+AC
Sbjct: 46 CKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQA-GT--GMCPVDKAHRNQCQAC 102
Query: 78 RLNKCFMSAMNKD 90
RL KC + MNKD
Sbjct: 103 RLKKCLQAGMNKD 115
>UNIPROTKB|F1ML62 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 UniGene:Bt.241 CTD:10002
KO:K08546 OMA:MLSQHTK GO:GO:0045872 EMBL:DAAA02027989
IPI:IPI01028398 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926
GeneID:281944 KEGG:bta:281944 NextBio:20805821 Uniprot:F1ML62
Length = 411
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 46/75 (61%), Positives = 57/75 (76%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+ G CP+DK HRNQC+
Sbjct: 37 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQ 93
Query: 76 ACRLNKCFMSAMNKD 90
ACRL KC + MN+D
Sbjct: 94 ACRLKKCLQAGMNQD 108
>UNIPROTKB|Q9TTF0 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 HSSP:P19793
eggNOG:NOG277339 EMBL:AF107729 IPI:IPI00954760 UniGene:Bt.241
STRING:Q9TTF0 InParanoid:Q9TTF0 OrthoDB:EOG41C6WF Uniprot:Q9TTF0
Length = 411
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 46/75 (61%), Positives = 57/75 (76%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+ G CP+DK HRNQC+
Sbjct: 37 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQ 93
Query: 76 ACRLNKCFMSAMNKD 90
ACRL KC + MN+D
Sbjct: 94 ACRLKKCLQAGMNQD 108
>UNIPROTKB|Q9Y5X4 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007602 "phototransduction"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602
HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339
OrthoDB:EOG41C6WF EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674
IPI:IPI00001888 IPI:IPI00215922 RefSeq:NP_055064.1
RefSeq:NP_057430.1 UniGene:Hs.187354 ProteinModelPortal:Q9Y5X4
SMR:Q9Y5X4 MINT:MINT-4302911 STRING:Q9Y5X4 PhosphoSite:Q9Y5X4
DMDM:8928275 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002
UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974
MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540
PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 BindingDB:Q9Y5X4
ChEMBL:CHEMBL4374 GenomeRNAi:10002 NextBio:37775 CleanEx:HS_NR2E3
Genevestigator:Q9Y5X4 GermOnline:ENSG00000031544 Uniprot:Q9Y5X4
Length = 410
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 46/75 (61%), Positives = 57/75 (76%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+ G CP+DK HRNQC+
Sbjct: 45 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQ 101
Query: 76 ACRLNKCFMSAMNKD 90
ACRL KC + MN+D
Sbjct: 102 ACRLKKCLQAGMNQD 116
>MGI|MGI:1346317 [details] [associations]
symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive
regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0008285
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0030522
GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606
eggNOG:NOG277339 OrthoDB:EOG41C6WF CTD:10002 KO:K08546
EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 IPI:IPI00135703
RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7
SMR:Q9QXZ7 STRING:Q9QXZ7 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7
Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958
InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 Bgee:Q9QXZ7
CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7
GermOnline:ENSMUSG00000032292 GO:GO:0045872 Uniprot:Q9QXZ7
Length = 395
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 46/75 (61%), Positives = 57/75 (76%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+ G CP+DK HRNQC+
Sbjct: 38 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQ 94
Query: 76 ACRLNKCFMSAMNKD 90
ACRL KC + MN+D
Sbjct: 95 ACRLKKCLQAGMNQD 109
>UNIPROTKB|F1SIS0 [details] [associations]
symbol:F1SIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045872
"positive regulation of rhodopsin gene expression" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 OMA:MLSQHTK GO:GO:0045872
EMBL:CU570658 Ensembl:ENSSSCT00000005490 Uniprot:F1SIS0
Length = 419
Score = 282 (104.3 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 47/75 (62%), Positives = 58/75 (77%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R +Y C+ G G CP+DK HRNQC+
Sbjct: 45 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQ-MG--AGMCPVDKAHRNQCQ 101
Query: 76 ACRLNKCFMSAMNKD 90
ACRL KC + MN+D
Sbjct: 102 ACRLKKCLQAGMNQD 116
>ZFIN|ZDB-GENE-990415-253 [details] [associations]
symbol:nr2f5 "nuclear receptor subfamily 2, group
F, member 5" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-253 GO:GO:0005634
GO:GO:0046872 GO:GO:0007601 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:X70300 IPI:IPI00492421 PIR:S35334
RefSeq:NP_571261.1 UniGene:Dr.22 ProteinModelPortal:Q06726
SMR:Q06726 STRING:Q06726 Ensembl:ENSDART00000040769 GeneID:30427
KEGG:dre:30427 CTD:30427 InParanoid:Q06726 KO:K08702 OMA:HYNENGP
OrthoDB:EOG4JHCFP NextBio:20806829 ArrayExpress:Q06726 Bgee:Q06726
Uniprot:Q06726
Length = 403
Score = 267 (99.0 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 4 GTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGH 63
G D GD++ ++ C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+ D
Sbjct: 40 GNDALSGDKIPNVDCMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRGNRD---- 95
Query: 64 CPIDKTHRNQCRACRLNKCFMSAMNKD 90
CPID+ HRNQC+ CRL KC M ++
Sbjct: 96 CPIDQHHRNQCQYCRLKKCLKVGMRRE 122
>WB|WBGene00001400 [details] [associations]
symbol:fax-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043059
"regulation of forward locomotion" evidence=IMP] [GO:0043058
"regulation of backward locomotion" evidence=IMP] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0048665 "neuron fate specification"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
GO:GO:0048665 GO:GO:0043058 GeneTree:ENSGT00700000104390
HSSP:P19793 KO:K07295 GO:GO:0043059 EMBL:AF176087 EMBL:FO080551
RefSeq:NP_508547.1 UniGene:Cel.19526 ProteinModelPortal:G5EDJ0
SMR:G5EDJ0 EnsemblMetazoa:F56E3.4 GeneID:180609
KEGG:cel:CELE_F56E3.4 CTD:180609 WormBase:F56E3.4a OMA:FREYAGA
NextBio:910094 Uniprot:G5EDJ0
Length = 419
Score = 267 (99.0 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 47/73 (64%), Positives = 55/73 (75%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD SSGKHYGI +C+GCSGFFKRS+ R +Y C+A G G+C +DK HRNQC+AC
Sbjct: 102 CAVCGDVSSGKHYGILACNGCSGFFKRSVRRRLIYRCQA-GT--GNCVVDKAHRNQCQAC 158
Query: 78 RLNKCFMSAMNKD 90
RL KC MNKD
Sbjct: 159 RLKKCLNKGMNKD 171
>FB|FBgn0034012 [details] [associations]
symbol:Hr51 "Hormone receptor 51" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003707 "steroid
hormone receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0020037 "heme binding" evidence=IDA]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0020037 GO:GO:0016319 GO:GO:0048526
eggNOG:NOG277339 KO:K08546 OMA:MLSQHTK EMBL:BT122090
RefSeq:NP_611032.2 UniGene:Dm.16048 SMR:A1ZA01 STRING:A1ZA01
EnsemblMetazoa:FBtr0114456 GeneID:36702 KEGG:dme:Dmel_CG16801
CTD:36702 FlyBase:FBgn0034012 InParanoid:A1ZA01 OrthoDB:EOG4NCJVD
GenomeRNAi:36702 NextBio:799957 Uniprot:A1ZA01
Length = 582
Score = 270 (100.1 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 48/77 (62%), Positives = 56/77 (72%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD SSGKHYGI +C+GCSGFFKRS+ R +Y C+A G G C +DK HRNQ
Sbjct: 107 LGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQA-GT--GRCVVDKAHRNQ 163
Query: 74 CRACRLNKCFMSAMNKD 90
C+ACRL KC MNKD
Sbjct: 164 CQACRLKKCLQMGMNKD 180
>WB|WBGene00021417 [details] [associations]
symbol:nhr-236 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 EMBL:FO080811 RefSeq:NP_500190.3
ProteinModelPortal:Q9N418 SMR:Q9N418 PaxDb:Q9N418
EnsemblMetazoa:Y38F2AL.5 GeneID:189677 KEGG:cel:CELE_Y38F2AL.5
UCSC:Y38F2AL.5 CTD:189677 WormBase:Y38F2AL.5 eggNOG:NOG271764
HOGENOM:HOG000020978 InParanoid:Q9N418 OMA:HAVQHER Uniprot:Q9N418
Length = 283
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C+VCGDR+SG+HYG+ SCDGC GFFKRSI RN Y+CK GD C ID T RNQC+AC
Sbjct: 13 CRVCGDRASGRHYGVLSCDGCRGFFKRSIRRNLRYSCKESGD----CVIDVTRRNQCQAC 68
Query: 78 RLNKCFMSAMNK 89
R KC AMN+
Sbjct: 69 RFQKCITVAMNR 80
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 259 (96.2 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ D C ID+ HRNQ
Sbjct: 53 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQ 108
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 109 CQYCRLKKCFRVGMRKE 125
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 259 (96.2 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ D C ID+ HRNQ
Sbjct: 52 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQ 107
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 108 CQYCRLKKCFRVGMRKE 124
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 259 (96.2 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ D C ID+ HRNQ
Sbjct: 54 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQ 109
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 110 CQYCRLKKCFRVGMRKE 126
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 259 (96.2 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ D C ID+ HRNQ
Sbjct: 56 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQ 111
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 112 CQYCRLKKCFRVGMRKE 128
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 259 (96.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 44/77 (57%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ D C ID+ HRNQ
Sbjct: 57 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQ 112
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 113 CQYCRLKKCFRVGMRKE 129
>ZFIN|ZDB-GENE-030131-4362 [details] [associations]
symbol:nr2f6a "nuclear receptor subfamily 2, group
F, member 6a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030131-4362 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08549 OMA:DPNGGTN HSSP:P20393 EMBL:CR384062
EMBL:BC065330 IPI:IPI00494205 RefSeq:NP_991120.1 UniGene:Dr.77527
SMR:Q6P117 Ensembl:ENSDART00000022379 GeneID:325637 KEGG:dre:325637
CTD:325637 InParanoid:Q6P117 NextBio:20809398 Uniprot:Q6P117
Length = 402
Score = 258 (95.9 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 46/89 (51%), Positives = 60/89 (67%)
Query: 4 GTDNSLG--DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
G+D G D+ + C VCGD+SSGKHYG+++C+GC FFKRS+ RN YTC++ D
Sbjct: 37 GSDMEAGEDDKGCVVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLNYTCRSNRD-- 94
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C ID+ HRNQC+ CRL KCF M K+
Sbjct: 95 --CQIDQHHRNQCQYCRLKKCFRVGMRKE 121
>UNIPROTKB|E9PSV4 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
IPI:IPI01007598 Ensembl:ENSRNOT00000067429 ArrayExpress:E9PSV4
Uniprot:E9PSV4
Length = 351
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ + NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 22 NLNSSNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 74
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 75 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 103
>UNIPROTKB|F1M5T7 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:2810
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 IPI:IPI00947962
Ensembl:ENSRNOT00000064595 ArrayExpress:F1M5T7 Uniprot:F1M5T7
Length = 190
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ + NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 22 NLNSSNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 74
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 75 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 103
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 256 (95.2 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKR+I RN YTC++ D C ID+ HRNQ
Sbjct: 53 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRD----CQIDQHHRNQ 108
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 109 CQYCRLKKCFRVGMRKE 125
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 256 (95.2 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
L + C VCGD+SSGKHYG+++C+GC FFKR+I RN YTC++ D C ID+ HRNQ
Sbjct: 53 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRD----CQIDQHHRNQ 108
Query: 74 CRACRLNKCFMSAMNKD 90
C+ CRL KCF M K+
Sbjct: 109 CQYCRLKKCFRVGMRKE 125
>ZFIN|ZDB-GENE-980526-115 [details] [associations]
symbol:nr2f1a "nuclear receptor subfamily 2, group
F, member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-115 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H
OMA:DKGQGQP EMBL:X70299 EMBL:CR751602 EMBL:BC056574 EMBL:BC066671
EMBL:U93463 IPI:IPI00499015 IPI:IPI00923775 IPI:IPI00923787
PIR:S35333 RefSeq:NP_571255.1 UniGene:Dr.16
ProteinModelPortal:Q06725 SMR:Q06725 Ensembl:ENSDART00000051263
Ensembl:ENSDART00000133384 GeneID:30418 KEGG:dre:30418 CTD:30418
InParanoid:O42536 NextBio:20806824 ArrayExpress:Q06725 Bgee:Q06725
Uniprot:Q06725
Length = 411
Score = 256 (95.2 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 46/87 (52%), Positives = 58/87 (66%)
Query: 4 GTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGH 63
G+ NS G I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A +
Sbjct: 63 GSQNS-GQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN---- 117
Query: 64 CPIDKTHRNQCRACRLNKCFMSAMNKD 90
CPID+ HRNQC+ CRL KC M ++
Sbjct: 118 CPIDQHHRNQCQYCRLKKCLKVGMRRE 144
>UNIPROTKB|F1NZ15 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005504 "fatty
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006591 "ornithine
metabolic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0007548 "sex differentiation" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0019216 "regulation
of lipid metabolic process" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0060395 "SMAD protein
signal transduction" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0030308 GO:GO:0046872
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 GeneTree:ENSGT00690000101777
OMA:PAFCDLP EMBL:AADN02019318 IPI:IPI00574089
Ensembl:ENSGALT00000006810 ArrayExpress:F1NZ15 Uniprot:F1NZ15
Length = 455
Score = 258 (95.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ T NS+G L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 38 NLNTSNSIGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FN 90
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 91 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 119
>MGI|MGI:109128 [details] [associations]
symbol:Hnf4a "hepatic nuclear factor 4, alpha" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006591 "ornithine metabolic process"
evidence=ISO] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0006637 "acyl-CoA metabolic process" evidence=ISO] [GO:0006805
"xenobiotic metabolic process" evidence=ISO] [GO:0007164
"establishment of tissue polarity" evidence=ISO] [GO:0007548 "sex
differentiation" evidence=IMP] [GO:0007596 "blood coagulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO;IMP] [GO:0010470 "regulation of gastrulation"
evidence=IMP] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0032534 "regulation
of microvillus assembly" evidence=ISO] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045216 "cell-cell
junction organization" evidence=ISO] [GO:0045722 "positive
regulation of gluconeogenesis" evidence=ISO] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=ISO] [GO:0055091 "phospholipid homeostasis" evidence=IMP]
[GO:0060395 "SMAD protein signal transduction" evidence=IDA]
[GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:109128 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0006629 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0044212 Reactome:REACT_127416 GO:GO:0000062 GO:GO:0006637
GO:GO:0016290 GO:GO:2000189 GO:GO:0005504 GO:GO:0070328
GO:GO:0006805 GO:GO:0006591 GO:GO:0043433 GO:GO:0030522
GO:GO:0031018 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 HOVERGEN:HBG005606 EMBL:AL591488 GO:GO:0010470
GO:GO:0033159 CTD:3172 eggNOG:NOG241134 KO:K07292 GO:GO:0007164
GO:GO:0032534 EMBL:D29015 EMBL:AY902317 EMBL:AK143948 EMBL:BC039220
EMBL:EF193393 IPI:IPI00230333 IPI:IPI00321964 PIR:S52074
RefSeq:NP_032287.2 UniGene:Mm.202383 ProteinModelPortal:P49698
SMR:P49698 IntAct:P49698 STRING:P49698 PhosphoSite:P49698
PaxDb:P49698 PRIDE:P49698 Ensembl:ENSMUST00000018094
Ensembl:ENSMUST00000109411 GeneID:15378 KEGG:mmu:15378
UCSC:uc008nta.2 UCSC:uc008ntb.1 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 InParanoid:P49698 OMA:PAFCDLP ChiTaRS:HNF4A
NextBio:288038 Bgee:P49698 CleanEx:MM_HNF4A Genevestigator:P49698
GermOnline:ENSMUSG00000017950 Uniprot:P49698
Length = 474
Score = 256 (95.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ + NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNSSNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>RGD|2810 [details] [associations]
symbol:Hnf4a "hepatocyte nuclear factor 4, alpha" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO;IPI] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006591 "ornithine
metabolic process" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=ISO] [GO:0006637 "acyl-CoA metabolic process"
evidence=IDA] [GO:0006805 "xenobiotic metabolic process"
evidence=ISO] [GO:0007164 "establishment of tissue polarity"
evidence=IDA] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IDA] [GO:0009749 "response to glucose
stimulus" evidence=ISO;IDA] [GO:0010470 "regulation of gastrulation"
evidence=ISO] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in regulation
of gene expression" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0032534 "regulation of microvillus assembly"
evidence=IMP] [GO:0033159 "negative regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045216 "cell-cell junction organization"
evidence=IDA] [GO:0045722 "positive regulation of gluconeogenesis"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IEP] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055091 "phospholipid homeostasis" evidence=ISO] [GO:0060395
"SMAD protein signal transduction" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2810
GO:GO:0005737 GO:GO:0008285 GO:GO:0042803 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629 GO:GO:0045722
GO:GO:0042593 GO:GO:0055091 GO:GO:0050796 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0000062 GO:GO:0006637 GO:GO:0016290
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524 GO:GO:0045216
HOVERGEN:HBG005606 GO:GO:0010470 GO:GO:0033159 CTD:3172
eggNOG:NOG241134 KO:K07292 GO:GO:0007164 GO:GO:0032534
HOGENOM:HOG000260822 EMBL:D10554 EMBL:X57133 EMBL:EF193392
IPI:IPI00207142 IPI:IPI00231412 PIR:A36471 PIR:S23502
RefSeq:NP_071516.2 UniGene:Rn.12238 PDB:1M7W PDBsum:1M7W
ProteinModelPortal:P22449 SMR:P22449 IntAct:P22449 STRING:P22449
PhosphoSite:P22449 GeneID:25735 KEGG:rno:25735 InParanoid:P22449
EvolutionaryTrace:P22449 NextBio:607871 ArrayExpress:P22449
Genevestigator:P22449 GermOnline:ENSRNOG00000008895 Uniprot:P22449
Length = 474
Score = 256 (95.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ + NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNSSNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|G3V750 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4, alpha, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005504 "fatty acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006591 "ornithine metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0009749 "response to glucose
stimulus" evidence=IEA] [GO:0010470 "regulation of gastrulation"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0055091 "phospholipid homeostasis" evidence=IEA] [GO:0060395
"SMAD protein signal transduction" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:CH474005
CTD:3172 KO:K07292 GeneTree:ENSGT00690000101777 RefSeq:NP_071516.2
UniGene:Rn.12238 GeneID:25735 KEGG:rno:25735
Ensembl:ENSRNOT00000011978 Uniprot:G3V750
Length = 474
Score = 256 (95.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ + NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNSSNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>ZFIN|ZDB-GENE-040426-2351 [details] [associations]
symbol:nr2f6b "nuclear receptor subfamily 2, group
F, member 6b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040426-2351 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 eggNOG:NOG277317 OrthoDB:EOG4FN4HT HSSP:P20393
EMBL:BX248501 EMBL:CT573239 EMBL:BC065332 IPI:IPI00503290
RefSeq:NP_998404.1 UniGene:Dr.16181 SMR:Q6P115
Ensembl:ENSDART00000027666 Ensembl:ENSDART00000123931 GeneID:406522
KEGG:dre:406522 CTD:406522 InParanoid:Q6P115 OMA:VMGIDSI
NextBio:20818095 Uniprot:Q6P115
Length = 404
Score = 253 (94.1 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
D+ + C VCGD+SSGKHYG+++C+GC FFKRSI RN YTC++ + C ID+ H
Sbjct: 46 DKACVVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLNYTCRSNRE----CQIDQHH 101
Query: 71 RNQCRACRLNKCFMSAMNKD 90
RNQC+ CRL KCF M K+
Sbjct: 102 RNQCQYCRLKKCFRVGMRKE 121
>UNIPROTKB|Q7YRQ5 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20153 EMBL:DAAA02036724 EMBL:AY318752 IPI:IPI00691213
RefSeq:NP_001015557.1 UniGene:Bt.107136 SMR:Q7YRQ5 STRING:Q7YRQ5
Ensembl:ENSBTAT00000016078 GeneID:509200 KEGG:bta:509200
InParanoid:Q7YRQ5 NextBio:20868867 Uniprot:Q7YRQ5
Length = 455
Score = 254 (94.5 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 38 NLNAPNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 90
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 91 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 119
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 252 (93.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/92 (50%), Positives = 59/92 (64%)
Query: 2 NVGTDNSLGDRLLD---IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQG 58
N + S GD+ I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A
Sbjct: 56 NAASQQSQGDKQQQQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANR 115
Query: 59 DLKGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
+ CPID+ HRNQC+ CRL KC M ++
Sbjct: 116 N----CPIDQHHRNQCQYCRLKKCLKVGMRRE 143
>UNIPROTKB|E2R9S0 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:AAEX03013956
RefSeq:XP_852731.1 ProteinModelPortal:E2R9S0
Ensembl:ENSCAFT00000014977 GeneID:485884 KEGG:cfa:485884
NextBio:20859787 Uniprot:E2R9S0
Length = 474
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNAPNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|P41235 [details] [associations]
symbol:HNF4A "Hepatocyte nuclear factor 4-alpha"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
[GO:0060398 "regulation of growth hormone receptor signaling
pathway" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0030308 "negative regulation of cell growth" evidence=IMP]
[GO:0007596 "blood coagulation" evidence=IDA] [GO:0005102 "receptor
binding" evidence=IDA] [GO:0005504 "fatty acid binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IDA] [GO:0006591 "ornithine metabolic process"
evidence=IMP] [GO:0006805 "xenobiotic metabolic process"
evidence=IMP] [GO:0055088 "lipid homeostasis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISS] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=ISS] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0009749 "response to glucose
stimulus" evidence=ISS] [GO:0050796 "regulation of insulin
secretion" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0055091 "phospholipid
homeostasis" evidence=ISS] [GO:0070328 "triglyceride homeostasis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 EMBL:CH471077 Reactome:REACT_111045
GO:GO:0008285 GO:GO:0042803 GO:GO:0005654 GO:GO:0030154
GO:GO:0030308 GO:GO:0042493 GO:GO:0046872 GO:GO:0007596
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0005102 GO:GO:0006629
GO:GO:0019216 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
Orphanet:552 Pathway_Interaction_DB:hnf3bpathway GO:GO:0050796
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0000062 GO:GO:0006637 GO:GO:0016290 GO:GO:2000189
GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0031018
GO:GO:0051591 GO:GO:0007548 GO:GO:0006367 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 MIM:606391 HOVERGEN:HBG005606 GO:GO:0010470
GO:GO:0033159 GO:GO:0033613 EMBL:X87870 EMBL:X87871 EMBL:X87872
EMBL:Z49825 EMBL:AY680696 EMBL:AY680697 EMBL:AY680698 EMBL:U72969
EMBL:U72959 EMBL:U72961 EMBL:U72962 EMBL:U72963 EMBL:U72964
EMBL:U72965 EMBL:U72966 EMBL:U72967 EMBL:U72968 EMBL:EF591040
EMBL:AL132772 EMBL:BC137539 EMBL:BC137540 EMBL:X76930
IPI:IPI00013196 IPI:IPI00216080 IPI:IPI00300558 IPI:IPI00412368
IPI:IPI00641248 IPI:IPI00645235 IPI:IPI00847265 PIR:JC4937
PIR:JC4938 PIR:JC6096 RefSeq:NP_000448.3 RefSeq:NP_001025174.1
RefSeq:NP_001025175.1 RefSeq:NP_001245284.1 RefSeq:NP_787110.2
RefSeq:NP_849181.1 UniGene:Hs.116462 PDB:1PZL PDB:3CBB PDB:3FS1
PDBsum:1PZL PDBsum:3CBB PDBsum:3FS1 ProteinModelPortal:P41235
SMR:P41235 DIP:DIP-499N IntAct:P41235 MINT:MINT-269829
STRING:P41235 PhosphoSite:P41235 DMDM:148886624 PaxDb:P41235
PRIDE:P41235 Ensembl:ENST00000316099 Ensembl:ENST00000316673
Ensembl:ENST00000415691 Ensembl:ENST00000443598
Ensembl:ENST00000457232 GeneID:3172 KEGG:hsa:3172 UCSC:uc002xlt.3
UCSC:uc002xlu.3 UCSC:uc002xly.3 UCSC:uc002xma.3 CTD:3172
GeneCards:GC20P042984 HGNC:HGNC:5024 HPA:CAB019417 HPA:HPA004712
MIM:125850 MIM:600281 neXtProt:NX_P41235 Orphanet:263455
PharmGKB:PA29349 eggNOG:NOG241134 KO:K07292 BindingDB:P41235
ChEMBL:CHEMBL5398 EvolutionaryTrace:P41235 GenomeRNAi:3172
NextBio:12578 ArrayExpress:P41235 Bgee:P41235 Genevestigator:P41235
GermOnline:ENSG00000101076 GO:GO:0007164 GO:GO:0060398
GO:GO:0032534 Uniprot:P41235
Length = 474
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNAPNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|Q1I181 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:CU062400
EMBL:DQ061106 RefSeq:NP_001038036.1 UniGene:Ssc.19208 SMR:Q1I181
STRING:Q1I181 Ensembl:ENSSSCT00000008067 GeneID:733636
KEGG:ssc:733636 Uniprot:Q1I181
Length = 474
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ NSLG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NLNAPNSLGVSAL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FS 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 250 (93.1 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 42/73 (57%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RSI +N VYTC+ C +DK RNQCR C
Sbjct: 59 CAICGDRATGKHYGASSCDGCKGFFRRSIRKNHVYTCR----FSRQCVVDKDKRNQCRYC 114
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 115 RLKKCFRAGMKKE 127
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 248 (92.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 81 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 136
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 137 YCRLKKCLKVGMRRE 151
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 83 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 138
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 139 YCRLKKCLKVGMRRE 153
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 83 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 138
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 139 YCRLKKCLKVGMRRE 153
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 248 (92.4 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 84 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 139
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 140 YCRLKKCLKVGMRRE 154
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 248 (92.4 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 85 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 140
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 141 YCRLKKCLKVGMRRE 155
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 85 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 140
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 141 YCRLKKCLKVGMRRE 155
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 246 (91.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|Q9TTR7 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9913
"Bos taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0001972 "retinoic acid binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0060849
"regulation of transcription involved in lymphatic endothelial cell
fate commitment" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IEA] [GO:0045736 "negative regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0001937 "negative regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
OrthoDB:EOG4MGS7H EMBL:AJ249441 EMBL:BC123677 IPI:IPI00695873
PIR:JH0787 RefSeq:NP_776827.1 UniGene:Bt.53763
ProteinModelPortal:Q9TTR7 SMR:Q9TTR7 STRING:Q9TTR7
Ensembl:ENSBTAT00000023969 GeneID:281945 KEGG:bta:281945 CTD:7026
InParanoid:Q9TTR7 KO:K08548 OMA:GPPNNTQ NextBio:20805822
ArrayExpress:Q9TTR7 GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
Uniprot:Q9TTR7
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|F1PX81 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 OMA:GPPNNTQ
EMBL:AAEX03002267 Ensembl:ENSCAFT00000017350 Uniprot:F1PX81
Length = 420
Score = 246 (91.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 77 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPIDQHHRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 YCRLKKCLKVGMRRE 147
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSG HYG ++C+GC FFKRS+ RN YTC+A + CPID+ HRNQC+
Sbjct: 14 IECVVCGDKSSGHHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN----CPIDQHHRNQCQ 69
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 70 YCRLKKCLKVGMRRE 84
>ZFIN|ZDB-GENE-040426-1438 [details] [associations]
symbol:nr2f1b "nuclear receptor subfamily 2, group
F, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-1438 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
EMBL:BC056748 EMBL:BC065651 IPI:IPI00482303 IPI:IPI00923764
RefSeq:NP_956886.1 UniGene:Dr.86046 HSSP:P19793
ProteinModelPortal:Q6PH18 SMR:Q6PH18 Ensembl:ENSDART00000027242
GeneID:393564 KEGG:dre:393564 CTD:393564 InParanoid:Q6PH18
OMA:MENIRIF NextBio:20814585 ArrayExpress:Q6PH18 Bgee:Q6PH18
Uniprot:Q6PH18
Length = 389
Score = 244 (91.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C VCGD+SSGKHYG ++C+GC FFKRS+ RN YTC+A + CP+D+ HRNQC+
Sbjct: 52 VECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPVDQHHRNQCQ 107
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 108 YCRLKKCLKVGMRRE 122
>UNIPROTKB|E1BS38 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00820290 Ensembl:ENSGALT00000033724 Uniprot:E1BS38
Length = 456
Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RS+ +N VY+C+ C IDK RNQCR C
Sbjct: 50 CSICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYSCR----FSRQCVIDKDKRNQCRYC 105
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 106 RLKKCFRAGMKKE 118
>UNIPROTKB|F1N848 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 OMA:EIEYIAL EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00593954 Ensembl:ENSGALT00000009154
Ensembl:ENSGALT00000039029 Uniprot:F1N848
Length = 459
Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RS+ +N VY+C+ C IDK RNQCR C
Sbjct: 61 CSICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYSCR----FSRQCVIDKDKRNQCRYC 116
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 117 RLKKCFRAGMKKE 129
>ZFIN|ZDB-GENE-030131-1077 [details] [associations]
symbol:hnf4a "hepatocyte nuclear factor 4, alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-1077 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20393 EMBL:CR318614 EMBL:BC056550 IPI:IPI00496171
UniGene:Dr.77049 SMR:Q6PHH5 STRING:Q6PHH5
Ensembl:ENSDART00000028236 Ensembl:ENSDART00000145426
InParanoid:Q6PHH5 Uniprot:Q6PHH5
Length = 463
Score = 247 (92.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 44/89 (49%), Positives = 57/89 (64%)
Query: 2 NVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
N+ N LG L C +CGDR++GKHYG SCDGC GFF+RS+ +N +Y+C+
Sbjct: 47 NMNAANHLGAGTL---CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FN 99
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 100 RQCIVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|F1MGG2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:DAAA02038880 IPI:IPI00694519 UniGene:Bt.16536
Ensembl:ENSBTAT00000010892 ArrayExpress:F1MGG2 Uniprot:F1MGG2
Length = 425
Score = 244 (91.0 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 5 TDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHC 64
T + D ++ C +CGDR++GKHYG SCDGC GFF+RSI ++ VY+C+ C
Sbjct: 16 TSMNTADNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----FSRQC 71
Query: 65 PIDKTHRNQCRACRLNKCFMSAMNKD 90
+DK RNQCR CRL KCF + M K+
Sbjct: 72 VVDKDKRNQCRYCRLRKCFRAGMKKE 97
>UNIPROTKB|Q14541 [details] [associations]
symbol:HNF4G "Hepatocyte nuclear factor 4-gamma"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0030522
GO:GO:0031018 GO:GO:0006367 HOVERGEN:HBG005606 eggNOG:NOG241134
HOGENOM:HOG000260822 EMBL:Z49826 EMBL:BX571750 EMBL:AF133504
EMBL:AF133496 EMBL:AF133497 EMBL:AF133498 EMBL:AF133499
EMBL:AF133500 EMBL:AF133501 EMBL:AF133502 EMBL:AF133503
EMBL:AF207953 EMBL:BC105009 EMBL:BC105011 IPI:IPI00291564
IPI:IPI00852837 PIR:JC6095 RefSeq:NP_004124.4 UniGene:Hs.241529
PDB:1LV2 PDBsum:1LV2 ProteinModelPortal:Q14541 SMR:Q14541
STRING:Q14541 PhosphoSite:Q14541 DMDM:160110004 PaxDb:Q14541
PRIDE:Q14541 DNASU:3174 Ensembl:ENST00000354370
Ensembl:ENST00000396423 GeneID:3174 KEGG:hsa:3174 UCSC:uc003yaq.3
CTD:3174 GeneCards:GC08P076370 H-InvDB:HIX0007597 HGNC:HGNC:5026
HPA:HPA005438 MIM:605966 neXtProt:NX_Q14541 PharmGKB:PA29351
InParanoid:Q14541 KO:K08037 OMA:ANYSEVL OrthoDB:EOG4G4GQH
ChEMBL:CHEMBL1961786 ChiTaRS:HNF4G EvolutionaryTrace:Q14541
GenomeRNAi:3174 NextBio:12594 ArrayExpress:Q14541 Bgee:Q14541
CleanEx:HS_HNF4G Genevestigator:Q14541 GermOnline:ENSG00000164749
Uniprot:Q14541
Length = 408
Score = 242 (90.2 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 47/90 (52%), Positives = 58/90 (64%)
Query: 1 MNVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
MN TDN G L C +CGDR++GKHYG SCDGC GFF+RSI ++ VY+C+
Sbjct: 1 MNT-TDN--GVNCL---CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----F 50
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +DK RNQCR CRL KCF + M K+
Sbjct: 51 SRQCVVDKDKRNQCRYCRLRKCFRAGMKKE 80
>WB|WBGene00006790 [details] [associations]
symbol:unc-55 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0010171 GO:GO:0040011 GO:GO:0030522
OMA:MENIRIF EMBL:Z75542 EMBL:EF601082 RefSeq:NP_001122482.2
UniGene:Cel.28878 ProteinModelPortal:G5ECR9 SMR:G5ECR9
EnsemblMetazoa:F55D12.4a GeneID:192082 KEGG:cel:CELE_F55D12.4
CTD:192082 WormBase:F55D12.4a Uniprot:G5ECR9
Length = 370
Score = 239 (89.2 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 46/84 (54%), Positives = 55/84 (65%)
Query: 8 SLGDRLLDIP-CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPI 66
SLG+ D C VCGD+SSGKHYG +SC+GC FFKRSI R+ YTC+A + C I
Sbjct: 10 SLGNSSPDATDCVVCGDKSSGKHYGQFSCEGCKSFFKRSIRRSLSYTCRATKN----CAI 65
Query: 67 DKTHRNQCRACRLNKCFMSAMNKD 90
D HRNQC+ CRL KC M K+
Sbjct: 66 DVQHRNQCQYCRLTKCIRMGMRKE 89
>UNIPROTKB|F1N2D7 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:DAAA02038880
IPI:IPI00904047 Ensembl:ENSBTAT00000052638 ArrayExpress:F1N2D7
Uniprot:F1N2D7
Length = 408
Score = 241 (89.9 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RSI ++ VY+C+ C +DK RNQCR C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----FSRQCVVDKDKRNQCRYC 67
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 68 RLRKCFRAGMKKE 80
>MGI|MGI:1353604 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_13641
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1353604 GO:GO:0005829 GO:GO:0045893
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018
HOVERGEN:HBG005606 eggNOG:NOG241134 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 CTD:3174 KO:K08037 OrthoDB:EOG4G4GQH
EMBL:AJ242626 IPI:IPI00322956 RefSeq:NP_038948.1 UniGene:Mm.330897
ProteinModelPortal:Q9WUU6 SMR:Q9WUU6 STRING:Q9WUU6
PhosphoSite:Q9WUU6 PRIDE:Q9WUU6 Ensembl:ENSMUST00000108393
GeneID:30942 KEGG:mmu:30942 InParanoid:Q9WUU6 NextBio:307386
Bgee:Q9WUU6 CleanEx:MM_HNF4G Genevestigator:Q9WUU6
GermOnline:ENSMUSG00000017688 Uniprot:Q9WUU6
Length = 408
Score = 241 (89.9 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RSI ++ VY+C+ C +DK RNQCR C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----FSRQCVVDKDKRNQCRYC 67
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 68 RLRKCFRAGMKKE 80
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 242 (90.2 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 8 SLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPID 67
S G+ + C +CGD+++GKHYG SCDGC GFF+RSI ++ VY+C+ C +D
Sbjct: 52 SQGENGVSSNCAICGDKATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----FNRQCVVD 107
Query: 68 KTHRNQCRACRLNKCFMSAMNKD 90
K RNQCR CRL+KCF + M K+
Sbjct: 108 KDKRNQCRFCRLHKCFRAGMKKE 130
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 242 (90.2 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 5 TDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHC 64
T + D ++ C +CGDR++GKHYG SCDGC GFF+RSI ++ VY+C+ C
Sbjct: 53 TSMNATDNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCR----FSRQC 108
Query: 65 PIDKTHRNQCRACRLNKCFMSAMNKD 90
+DK RNQCR CRL KCF + M K+
Sbjct: 109 VVDKDKRNQCRYCRLRKCFRAGMKKE 134
>UNIPROTKB|P51129 [details] [associations]
symbol:rxrg "Retinoic acid receptor RXR-gamma" species:8355
"Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11443
PIR:D41977 ProteinModelPortal:P51129 SMR:P51129 Uniprot:P51129
Length = 470
Score = 242 (90.2 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 46/90 (51%), Positives = 58/90 (64%)
Query: 1 MNVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
MN + NS G I C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ VYTC+ D
Sbjct: 130 MNNYSCNSPGALTKHI-CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKD- 187
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C IDK RN+C+ CR KC M ++
Sbjct: 188 ---CLIDKRQRNRCQYCRYQKCLAMGMKRE 214
>UNIPROTKB|E2RGP7 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:AAEX03011059 Ensembl:ENSCAFT00000020479
Uniprot:E2RGP7
Length = 518
Score = 243 (90.6 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N VY+C Q + CPID+T RN+C+
Sbjct: 29 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVVYSCTRQQN----CPIDRTSRNRCQ 84
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 85 HCRLQKCLALGMSRDAVK 102
>UNIPROTKB|F1P101 [details] [associations]
symbol:F1P101 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 EMBL:AADN02066725 EMBL:AADN02066726
IPI:IPI00576452 Ensembl:ENSGALT00000001533 OMA:GSIRILE
Uniprot:F1P101
Length = 302
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>WB|WBGene00003603 [details] [associations]
symbol:nhr-4 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:Z81074
GeneTree:ENSGT00700000104802 EMBL:AF083223 PIR:T21645 PIR:T43346
RefSeq:NP_501775.1 UniGene:Cel.19600 ProteinModelPortal:O45436
SMR:O45436 DIP:DIP-25524N IntAct:O45436 MINT:MINT-1120817
PaxDb:O45436 EnsemblMetazoa:F32B6.1 GeneID:177839
KEGG:cel:CELE_F32B6.1 UCSC:F32B6.1.2 CTD:177839 WormBase:F32B6.1
eggNOG:NOG277733 HOGENOM:HOG000017160 InParanoid:O45436 OMA:DVAFGKH
NextBio:898600 Uniprot:O45436
Length = 492
Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 45/85 (52%), Positives = 56/85 (65%)
Query: 6 DNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
+ S G RL+ C VCGD + GKHYGI +C+GC GFF+RS+ R Y+C+ GD CP
Sbjct: 41 ETSNGGRLI---CDVCGDVAFGKHYGINACNGCKGFFRRSVWSRRQYSCRFGGD----CP 93
Query: 66 IDKTHRNQCRACRLNKCFMSAMNKD 90
+ K HRN CR+CRL KCF MN D
Sbjct: 94 VVKEHRNVCRSCRLKKCFEVGMNPD 118
>UNIPROTKB|Q0VC20 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K EMBL:BC120391
IPI:IPI00712482 RefSeq:NP_001068876.1 UniGene:Bt.11333
ProteinModelPortal:Q0VC20 SMR:Q0VC20 STRING:Q0VC20 PRIDE:Q0VC20
Ensembl:ENSBTAT00000022350 GeneID:509500 KEGG:bta:509500 CTD:6258
InParanoid:Q0VC20 KO:K08526 OMA:FMKFPTG NextBio:20868991
Uniprot:Q0VC20
Length = 463
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>UNIPROTKB|P48443 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
EMBL:CH471067 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0032526
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0007519 HOVERGEN:HBG005606 EMBL:AL160058 DrugBank:DB00523
DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:U38480 EMBL:CR456705
EMBL:BC012063 IPI:IPI00009736 RefSeq:NP_001243500.1
RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8
ProteinModelPortal:P48443 SMR:P48443 DIP:DIP-56220N IntAct:P48443
MINT:MINT-1378806 STRING:P48443 PhosphoSite:P48443 DMDM:1350913
PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842
GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370
HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443
PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443
BindingDB:P48443 ChEMBL:CHEMBL2004 EvolutionaryTrace:P48443
GenomeRNAi:6258 NextBio:24303 ArrayExpress:P48443 Bgee:P48443
CleanEx:HS_RXRG Genevestigator:P48443 GermOnline:ENSG00000143171
Uniprot:P48443
Length = 463
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>UNIPROTKB|Q0GFF6 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:DQ866834 EMBL:AY429474
RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6
SMR:Q0GFF6 STRING:Q0GFF6 Ensembl:ENSSSCT00000006936 GeneID:445465
KEGG:ssc:445465 Uniprot:Q0GFF6
Length = 463
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>MGI|MGI:98216 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98216 GO:GO:0005634
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
GO:GO:0032526 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:M84819 EMBL:X66225 EMBL:S62948
EMBL:BC058401 IPI:IPI00124345 PIR:B41727 PIR:S26670
RefSeq:NP_001153203.1 RefSeq:NP_033133.1 UniGene:Mm.3475
ProteinModelPortal:P28705 SMR:P28705 STRING:P28705
PhosphoSite:P28705 PRIDE:P28705 Ensembl:ENSMUST00000015987
Ensembl:ENSMUST00000111384 Ensembl:ENSMUST00000111386 GeneID:20183
KEGG:mmu:20183 UCSC:uc007dla.2 InParanoid:P28705 BindingDB:P28705
ChEMBL:CHEMBL4402 NextBio:297713 Bgee:P28705 CleanEx:MM_RXRG
Genevestigator:P28705 GermOnline:ENSMUSG00000015843 Uniprot:P28705
Length = 463
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>RGD|620046 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0007422
"peripheral nervous system development" evidence=IEP] [GO:0007507
"heart development" evidence=IEP] [GO:0007519 "skeletal muscle
tissue development" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620046
GO:GO:0005634 GO:GO:0007507 GO:GO:0030182 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007422 GO:GO:0014070 GO:GO:0032526 GO:GO:0032870
GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HSSP:P19793 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:BC091363 IPI:IPI00363863
RefSeq:NP_113953.1 UniGene:Rn.40816 ProteinModelPortal:Q5BJR8
SMR:Q5BJR8 STRING:Q5BJR8 PhosphoSite:Q5BJR8
Ensembl:ENSRNOT00000006117 GeneID:83574 KEGG:rno:83574
UCSC:RGD:620046 InParanoid:Q5BJR8 BindingDB:Q5BJR8
ChEMBL:CHEMBL4277 NextBio:616077 ArrayExpress:Q5BJR8
Genevestigator:Q5BJR8 Uniprot:Q5BJR8
Length = 463
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>UNIPROTKB|B7Z3E4 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR354565 UniGene:Hs.388034 HGNC:HGNC:10478
ChiTaRS:RXRB EMBL:AK295759 IPI:IPI00922754 SMR:B7Z3E4 STRING:B7Z3E4
Ensembl:ENST00000413614 Ensembl:ENST00000549096
Ensembl:ENST00000549320 Ensembl:ENST00000551433
Ensembl:ENST00000553107 UCSC:uc003ode.1 HOVERGEN:HBG105962
Uniprot:B7Z3E4
Length = 286
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 109 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 164
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 165 RYQKCLATGMKRE 177
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 15 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 70
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 71 RYQKCLATGMKRE 83
>UNIPROTKB|P51449 [details] [associations]
symbol:RORC "Nuclear receptor ROR-gamma" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0033077 "T
cell differentiation in thymus" evidence=IEA] [GO:0048535 "lymph
node development" evidence=IEA] [GO:0048537 "mucosal-associated
lymphoid tissue development" evidence=IEA] [GO:0072539 "T-helper 17
cell differentiation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077 GO:GO:0006367
GO:GO:0048535 EMBL:AL589765 PDB:3KYT PDB:3L0J PDB:3L0L PDBsum:3KYT
PDBsum:3L0J PDBsum:3L0L HOVERGEN:HBG106848 EMBL:U16997
EMBL:AL834219 EMBL:BC031554 IPI:IPI00216710 IPI:IPI00418178
PIR:JC2494 RefSeq:NP_001001523.1 RefSeq:NP_005051.2
UniGene:Hs.256022 UniGene:Hs.607993 PDB:3B0W PDBsum:3B0W
ProteinModelPortal:P51449 SMR:P51449 IntAct:P51449 STRING:P51449
PhosphoSite:P51449 DMDM:49066040 PRIDE:P51449 DNASU:6097
Ensembl:ENST00000318247 Ensembl:ENST00000356728 GeneID:6097
KEGG:hsa:6097 UCSC:uc001ezh.3 CTD:6097 GeneCards:GC01M151778
HGNC:HGNC:10260 MIM:602943 neXtProt:NX_P51449 PharmGKB:PA34632
eggNOG:NOG317095 KO:K08534 ChEMBL:CHEMBL1741186
EvolutionaryTrace:P51449 GenomeRNAi:6097 NextBio:23717
ArrayExpress:P51449 Bgee:P51449 CleanEx:HS_RORC
Genevestigator:P51449 GermOnline:ENSG00000143365 GO:GO:0048537
GO:GO:0072539 Uniprot:P51449
Length = 518
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 29 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQN----CPIDRTSRNRCQ 84
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 85 HCRLQKCLALGMSRDAVK 102
>FB|FBgn0004914 [details] [associations]
symbol:Hnf4 "Hepatocyte nuclear factor 4" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0007492 "endoderm development"
evidence=NAS] [GO:0008610 "lipid biosynthetic process"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IDA]
[GO:0034440 "lipid oxidation" evidence=IDA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
EMBL:AE014134 GO:GO:0016042 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 EMBL:U70874 PIR:S36218
RefSeq:NP_723414.1 UniGene:Dm.4524 ProteinModelPortal:P49866
SMR:P49866 MINT:MINT-1331960 STRING:P49866 PaxDb:P49866
EnsemblMetazoa:FBtr0079749 GeneID:44544 KEGG:dme:Dmel_CG9310
CTD:44544 FlyBase:FBgn0004914 InParanoid:P49866 KO:K08704
OrthoDB:EOG4Z08MV GenomeRNAi:44544 NextBio:837399 Bgee:P49866
GermOnline:CG9310 GO:GO:0034440 Uniprot:P49866
Length = 666
Score = 243 (90.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+RS+ +N YTC+ +C +DK RNQCR C
Sbjct: 104 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCR----FARNCVVDKDKRNQCRYC 159
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 160 RLRKCFKAGMKKE 172
>ZFIN|ZDB-GENE-040718-34 [details] [associations]
symbol:rxrgb "retinoid X receptor, gamma b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040718-34 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 InterPro:IPR021780 Pfam:PF11825
EMBL:BX296562 IPI:IPI00972012 Ensembl:ENSDART00000110950
Bgee:F1QDD2 Uniprot:F1QDD2
Length = 458
Score = 239 (89.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ YTC+ D+K C IDK RN+C+ C
Sbjct: 133 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCR---DIK-ECLIDKRQRNRCQYC 188
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 189 RYQKCLAMGMKRE 201
>ZFIN|ZDB-GENE-030131-2730 [details] [associations]
symbol:hnf4b "hepatic nuclear factor 4, beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030131-2730 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 eggNOG:NOG241134 HSSP:P11473
EMBL:BC065657 IPI:IPI00509611 RefSeq:NP_991109.1 UniGene:Dr.6336
ProteinModelPortal:Q6P0E0 SMR:Q6P0E0 GeneID:324010 KEGG:dre:324010
CTD:324010 NextBio:20808536 Uniprot:Q6P0E0
Length = 465
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 39/73 (53%), Positives = 49/73 (67%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +C DR++GKHYG SCDGC GFF+RS+ +N YTC+ C +DK RNQCR C
Sbjct: 63 CAICADRATGKHYGASSCDGCKGFFRRSVRKNHAYTCR----FSRQCVVDKDKRNQCRYC 118
Query: 78 RLNKCFMSAMNKD 90
RL KCF + M K+
Sbjct: 119 RLRKCFRAGMRKE 131
>UNIPROTKB|H0YLS5 [details] [associations]
symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC087385 EMBL:AC009560
EMBL:AC012404 EMBL:AC022898 EMBL:AC079068 EMBL:AC107241
EMBL:AC107905 HGNC:HGNC:10258 ChiTaRS:RORA Ensembl:ENST00000559343
Bgee:H0YLS5 Uniprot:H0YLS5
Length = 153
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 73 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 128
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 129 HCRLQKCLAVGMSRDAVK 146
>UNIPROTKB|H7BYJ4 [details] [associations]
symbol:RORC "Nuclear receptor ROR-gamma" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 EMBL:AL589765 HGNC:HGNC:10260
ProteinModelPortal:H7BYJ4 SMR:H7BYJ4 Ensembl:ENST00000392697
OMA:AFPPLYK Bgee:H7BYJ4 Uniprot:H7BYJ4
Length = 572
Score = 241 (89.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 83 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQN----CPIDRTSRNRCQ 138
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 139 HCRLQKCLALGMSRDAVK 156
>FB|FBgn0003651 [details] [associations]
symbol:svp "seven up" species:7227 "Drosophila melanogaster"
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0007503 "fat body development" evidence=TAS] [GO:0061331
"epithelial cell proliferation involved in Malpighian tubule
morphogenesis" evidence=IMP] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048749
"compound eye development" evidence=NAS] [GO:0004872 "receptor
activity" evidence=NAS;TAS] [GO:0001752 "compound eye photoreceptor
fate commitment" evidence=TAS] [GO:0007465 "R7 cell fate
commitment" evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=TAS] [GO:0007462 "R1/R6 cell fate commitment"
evidence=TAS] [GO:0007510 "cardioblast cell fate determination"
evidence=IGI;IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007507
"heart development" evidence=NAS;TAS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=NAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0042331 "phototaxis"
evidence=IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0046530
"photoreceptor cell differentiation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0007601 UniGene:Dm.20676 GeneID:41491
KEGG:dme:Dmel_CG11502 CTD:41491 FlyBase:FBgn0003651
GeneTree:ENSGT00670000097509 KO:K14032 GenomeRNAi:41491
NextBio:824138 GermOnline:CG11502 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 GO:GO:0007510
GO:GO:0061331 GO:GO:0007503 GO:GO:0007270 GO:GO:0042331
GO:GO:0007462 GO:GO:0007464 GO:GO:0007465 GO:GO:0007419
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:M28864
PIR:B32693 RefSeq:NP_731681.1 ProteinModelPortal:P16376 SMR:P16376
STRING:P16376 EnsemblMetazoa:FBtr0082563 InParanoid:P16376
PhylomeDB:P16376 Bgee:P16376 Uniprot:P16376
Length = 746
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
D +I C VCGD+SSGKHYG ++C+GC FFKRS+ RN Y+C+ + CPID+ H
Sbjct: 193 DSKQNIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRN----CPIDQHH 248
Query: 71 RNQCRACRLNKCFMSAMNKD 90
RNQC+ CRL KC M ++
Sbjct: 249 RNQCQYCRLKKCLKMGMRRE 268
>UNIPROTKB|B3KY83 [details] [associations]
symbol:RXRA "cDNA FLJ16020 fis, clone BRAMY2003287, highly
similar to RETINOIC ACID RECEPTOR RXR-ALPHA" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060687 "regulation
of branching involved in prostate gland morphogenesis"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006954
GO:GO:0045944 GO:GO:0051384 GO:GO:0007565 GO:GO:0001889
GO:GO:0007494 GO:GO:0044212 GO:GO:0043065 GO:GO:0032526
GO:GO:0003690 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038
GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:AC156789 EMBL:AL354796 EMBL:AL669970 EMBL:AL683798
UniGene:Hs.590886 HGNC:HGNC:10477 EMBL:AK131192 IPI:IPI01011260
SMR:B3KY83 STRING:B3KY83 Ensembl:ENST00000540193 Uniprot:B3KY83
Length = 365
Score = 234 (87.4 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 38 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 93
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 94 RYQKCLAMGMKRE 106
>ZFIN|ZDB-GENE-990415-243 [details] [associations]
symbol:rxrab "retinoid x receptor, alpha b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 EMBL:U29894 IPI:IPI00481196 PIR:I50514
RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415
SMR:Q90415 STRING:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011
HOGENOM:HOG000260821 InParanoid:Q90415 OrthoDB:EOG4SJ5DV
NextBio:20931280 ArrayExpress:Q90415 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415
Length = 379
Score = 235 (87.8 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 54 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CMIDKRQRNRCQYC 109
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 110 RYQKCLAMGMKRE 122
>UNIPROTKB|F1LNV3 [details] [associations]
symbol:F1LNV3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:AC133978 IPI:IPI00948562
Ensembl:ENSRNOT00000067042 ArrayExpress:F1LNV3 Uniprot:F1LNV3
Length = 486
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 7 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQN----CPIDRTSRNRCQ 62
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 63 HCRLQKCLALGMSRDAVK 80
>UNIPROTKB|E2RD69 [details] [associations]
symbol:RXRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:AAEX03018391
RefSeq:XP_536146.2 ProteinModelPortal:E2RD69
Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989
NextBio:20854245 Uniprot:E2RD69
Length = 463
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKD----CLIDKRQRNRCQYC 194
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 195 RYQKCLVMGMKRE 207
>UNIPROTKB|F1N7B3 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:DAAA02007247 IPI:IPI00687924 UniGene:Bt.49360
Ensembl:ENSBTAT00000044130 Uniprot:F1N7B3
Length = 506
Score = 239 (89.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 29 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQN----CPIDRTSRNRCQ 84
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 85 HCRLQKCLALGMSRDAVK 102
>UNIPROTKB|F1NSP3 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 IPI:IPI00600229 EMBL:AADN02034021 EMBL:AADN02034022
EMBL:AADN02034023 Ensembl:ENSGALT00000005387 OMA:FIKFPAG
Uniprot:F1NSP3
Length = 467
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 143 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 198
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 199 RYQKCLAMGMKRE 211
>UNIPROTKB|P28701 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 EMBL:X58997 EMBL:S72435 IPI:IPI00584417 IPI:IPI00600229
PIR:A43781 PIR:S46479 RefSeq:NP_990625.1 UniGene:Gga.717
ProteinModelPortal:P28701 SMR:P28701 STRING:P28701 GeneID:396231
KEGG:gga:396231 InParanoid:P28701 NextBio:20816283 Uniprot:P28701
Length = 467
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 143 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 198
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 199 RYQKCLAMGMKRE 211
>UNIPROTKB|K7GLR7 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 Gene3D:3.30.50.10
GeneTree:ENSGT00690000101777 EMBL:CU462963 EMBL:CU469086
Ensembl:ENSSSCT00000033501 Uniprot:K7GLR7
Length = 78
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ +YTC+ D C IDK RN+C+ C
Sbjct: 16 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD----CLIDKRQRNRCQYC 71
Query: 78 RLNKCFM 84
R KC +
Sbjct: 72 RYQKCLV 78
>RGD|1595785 [details] [associations]
symbol:Rorc "RAR-related orphan receptor C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1595785
GO:GO:0005634 GO:GO:0046872 GO:GO:0007623 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077
GO:GO:0030522 GO:GO:0048535 GO:GO:0048537 GO:GO:0072539 OMA:AFPPLYK
EMBL:AC133978 IPI:IPI00370940 Ensembl:ENSRNOT00000028292
ArrayExpress:F1LRS6 Uniprot:F1LRS6
Length = 508
Score = 239 (89.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 29 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQN----CPIDRTSRNRCQ 84
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 85 HCRLQKCLALGMSRDAVK 102
>MGI|MGI:104856 [details] [associations]
symbol:Rorc "RAR-related orphan receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046632
"alpha-beta T cell differentiation" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048535 "lymph node
development" evidence=IMP] [GO:0048537 "mucosal-associated lymphoid
tissue development" evidence=IMP] [GO:0072539 "T-helper 17 cell
differentiation" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:104856
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077 GO:GO:0030522
GO:GO:0048535 GeneTree:ENSGT00700000104109 HOGENOM:HOG000010200
HOVERGEN:HBG106848 CTD:6097 eggNOG:NOG317095 KO:K08534
GO:GO:0048537 GO:GO:0072539 EMBL:U43508 EMBL:AF019660 EMBL:AF019655
EMBL:AF019656 EMBL:AF019657 EMBL:AF019658 EMBL:AF019659 EMBL:U39071
EMBL:AF163668 EMBL:AJ132394 EMBL:BC014804 IPI:IPI00228543
IPI:IPI00311164 PIR:JC5375 RefSeq:NP_035411.2 UniGene:Mm.4372
ProteinModelPortal:P51450 SMR:P51450 DIP:DIP-59439N IntAct:P51450
STRING:P51450 PhosphoSite:P51450 PRIDE:P51450
Ensembl:ENSMUST00000029795 Ensembl:ENSMUST00000107292 GeneID:19885
KEGG:mmu:19885 InParanoid:P51450 OrthoDB:EOG4229JB
ChEMBL:CHEMBL1293231 NextBio:297392 Bgee:P51450 CleanEx:MM_RORC
Genevestigator:P51450 GermOnline:ENSMUSG00000028150 Uniprot:P51450
Length = 516
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 29 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQN----CPIDRTSRNRCQ 84
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 85 HCRLQKCLALGMSRDAVK 102
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 237 (88.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 39/73 (53%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ YTC+ D C IDK RN+C+ C
Sbjct: 117 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKD----CQIDKRQRNRCQYC 172
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 173 RYQKCLAMGMKRE 185
>ZFIN|ZDB-GENE-990415-250 [details] [associations]
symbol:rorca "RAR-related orphan receptor C a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-250 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:CR450766 IPI:IPI00844980
ProteinModelPortal:F1QGI9 Ensembl:ENSDART00000100484 Bgee:F1QGI9
Uniprot:F1QGI9
Length = 480
Score = 238 (88.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N +Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRN----CIIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 234 (87.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 108 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 163
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 164 RYQKCLATGMKRE 176
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 234 (87.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 66 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 121
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 122 RYQKCLATGMKRE 134
>WB|WBGene00003652 [details] [associations]
symbol:nhr-62 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104802 EMBL:Z83235 EMBL:AL032645 PIR:T23558
RefSeq:NP_492607.1 ProteinModelPortal:O02279 SMR:O02279
PaxDb:O02279 EnsemblMetazoa:Y67A6A.2a GeneID:172836
KEGG:cel:CELE_Y67A6A.2 UCSC:Y67A6A.2 CTD:172836 WormBase:Y67A6A.2a
eggNOG:NOG294772 HOGENOM:HOG000017417 InParanoid:O02279 OMA:CAIAKEH
NextBio:877201 ArrayExpress:O02279 Uniprot:O02279
Length = 515
Score = 238 (88.8 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 14 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQ 73
+++ C VCGD++ GKHYG+ +C+GC GFF+RS+ NR Y C+ +G C I K HRN
Sbjct: 94 INLVCVVCGDQAFGKHYGVNACNGCKGFFRRSVWHNRQYLCR----FEGRCAIAKEHRNV 149
Query: 74 CRACRLNKCFMSAMN 88
CRACRL +CF++ MN
Sbjct: 150 CRACRLKQCFVAGMN 164
>UNIPROTKB|I3L553 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:FP340554 Ensembl:ENSSSCT00000029985 Uniprot:I3L553
Length = 574
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + CPID+T RN+C+
Sbjct: 85 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQN----CPIDRTSRNRCQ 140
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 141 HCRLQKCLALGMSRDAVK 158
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 234 (87.4 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 66 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 121
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 122 RYQKCLATGMKRE 134
>ZFIN|ZDB-GENE-041210-198 [details] [associations]
symbol:nr2c1 "nuclear receptor subfamily 2, group
C, member 1" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041210-198 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596
OMA:MEHIWRM EMBL:BX640593 IPI:IPI00494218 UniGene:Dr.42016
SMR:Q5RH32 Ensembl:ENSDART00000066948 Ensembl:ENSDART00000128968
InParanoid:Q5RH32 Uniprot:Q5RH32
Length = 600
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRSI +N VYTC+ G+ C I+K HRN+C+ C
Sbjct: 113 CVVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGE----CVINKHHRNRCQYC 168
Query: 78 RLNKCFMSAMNKD 90
RL +C M +D
Sbjct: 169 RLQRCMALGMKQD 181
>WB|WBGene00021848 [details] [associations]
symbol:nhr-239 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:FO081806
GeneTree:ENSGT00700000104390 EMBL:FO081807 RefSeq:NP_497579.3
ProteinModelPortal:Q9BKZ8 SMR:Q9BKZ8 EnsemblMetazoa:Y54F10AM.1
GeneID:190264 KEGG:cel:CELE_Y54F10AM.1 UCSC:Y54F10AM.1 CTD:190264
WormBase:Y54F10AM.1 eggNOG:NOG310907 HOGENOM:HOG000214264
InParanoid:Q9BKZ8 OMA:CEICGDK Uniprot:Q9BKZ8
Length = 262
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 40/74 (54%), Positives = 54/74 (72%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C++CGD+S G+HYG+++CDGCS FFKRS+ +N +YTC A G+ K C +DK RN C
Sbjct: 9 VNCEICGDKSYGRHYGVWACDGCSCFFKRSVRKNIIYTCIA-GNWK--CVVDKGRRNWCP 65
Query: 76 ACRLNKCFMSAMNK 89
ACRL KC MN+
Sbjct: 66 ACRLAKCTRLKMNR 79
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 234 (87.4 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 82 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 137
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 138 RYQKCLATGMKRE 150
>ZFIN|ZDB-GENE-040724-215 [details] [associations]
symbol:rorcb "RAR-related orphan receptor C b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-215 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:DQ017628
IPI:IPI00498218 UniGene:Dr.12904 InParanoid:Q1L678 Uniprot:Q1L678
Length = 480
Score = 236 (88.1 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N +Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M++D
Sbjct: 64 HCRLQKCLALGMSRD 78
>ZFIN|ZDB-GENE-110411-42 [details] [associations]
symbol:si:dkey-80m2.2 "si:dkey-80m2.2" species:7955
"Danio rerio" [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-110411-42
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CR388088 EMBL:CR628385 EMBL:CR749162 IPI:IPI00995584
ProteinModelPortal:E7FBX0 Ensembl:ENSDART00000128798 Uniprot:E7FBX0
Length = 480
Score = 236 (88.1 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS + Y+C Q + CPID+ RN+C+
Sbjct: 9 IPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSRQSN----CPIDRASRNRCQ 64
Query: 76 ACRLNKCFMSAMNKDDFK 93
+CRL KC M++D K
Sbjct: 65 SCRLKKCVAQGMSRDAVK 82
>UNIPROTKB|F1NH64 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0004886 "9-cis retinoic acid
receptor activity" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response
element binding" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060687
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0044323
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD
GO:GO:0070644 EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026435
IPI:IPI00584474 Ensembl:ENSGALT00000004139 Uniprot:F1NH64
Length = 448
Score = 234 (87.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 121 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 176
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 177 RYQKCLAMGMKRE 189
>UNIPROTKB|P51128 [details] [associations]
symbol:rxra "Retinoic acid receptor RXR-alpha" species:8355
"Xenopus laevis" [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11446
PIR:C41977 ProteinModelPortal:P51128 SMR:P51128 Uniprot:P51128
Length = 488
Score = 235 (87.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 161 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKD----CMIDKRQRNRCQYC 216
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 217 RYQKCLAMGMKRE 229
>UNIPROTKB|F1SJB4 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GO:GO:0042462
GeneTree:ENSGT00700000104109 OMA:SGHTMRA EMBL:CU468713
EMBL:CU062494 Ensembl:ENSSSCT00000005803 Uniprot:F1SJB4
Length = 452
Score = 234 (87.4 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 237 (88.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 5 TDNSLGD----RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS D ++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 98 TDNSSPDQGPNKVFDL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKD- 155
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 156 ---CIINKHHRNRCQYCRLQRCIAFGMRQD 182
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 235 (87.8 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 168 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CVIDKRQRNRCQYC 223
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 224 RYQKCLAMGMKRE 236
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 234 (87.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 130 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 185
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 186 RYQKCLATGMKRE 198
>UNIPROTKB|Q98934 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG324222 GeneTree:ENSGT00700000104109
HOGENOM:HOG000010200 HOVERGEN:HBG106848 CTD:6096 KO:K08533
OrthoDB:EOG4KH2TT EMBL:AADN02059739 EMBL:AADN02059740
EMBL:AADN02059741 EMBL:AADN02059742 EMBL:AADN02059743
EMBL:AADN02059744 EMBL:AADN02059745 EMBL:AADN02059746
EMBL:AADN02059747 EMBL:AADN02059748 EMBL:AADN02059749
EMBL:AADN02059750 EMBL:Y08638 IPI:IPI00597298 RefSeq:NP_990424.1
UniGene:Gga.581 HSSP:P45446 SMR:Q98934 STRING:Q98934
Ensembl:ENSGALT00000024445 GeneID:395980 KEGG:gga:395980
NextBio:20816045 Uniprot:Q98934
Length = 459
Score = 234 (87.4 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>UNIPROTKB|F1MWS0 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GO:GO:0042462
GeneTree:ENSGT00700000104109 CTD:6096 KO:K08533 OMA:SGHTMRA
EMBL:DAAA02022913 EMBL:DAAA02022911 EMBL:DAAA02022912
IPI:IPI00709815 RefSeq:NP_001179587.1 UniGene:Bt.51697
Ensembl:ENSBTAT00000028921 GeneID:528382 KEGG:bta:528382
NextBio:20874809 Uniprot:F1MWS0
Length = 459
Score = 234 (87.4 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>UNIPROTKB|P19793 [details] [associations]
symbol:RXRA "Retinoic acid receptor RXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044323 "retinoic acid-responsive element
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0019048 "virus-host interaction"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006766 "vitamin metabolic process" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0003708 "retinoic acid receptor activity"
evidence=TAS] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0070644 "vitamin D response element binding"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471090 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0008203 GO:GO:0001889 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 GO:GO:0000790 GO:GO:0003713 GO:GO:0032526
GO:GO:0003690 GO:GO:0046982 GO:GO:0001890
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0033189
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0010269 GO:GO:0031490 GO:GO:0033280 GO:GO:0031103
GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606
GO:GO:0006766 PDB:1R0N PDBsum:1R0N GO:GO:0060528 GO:GO:0035357
GO:GO:0055012 GO:GO:0044323 PDB:1FM6 PDB:1FM9 PDB:1K74 PDB:1RDT
PDB:1XV9 PDB:1XVP PDB:3H0A PDBsum:1FM6 PDBsum:1FM9 PDBsum:1K74
PDBsum:1RDT PDBsum:1XV9 PDBsum:1XVP PDBsum:3H0A PDB:1MV9 PDB:1MVC
PDB:1MZN PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0 PDB:3DZU
PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3KWY PDB:3OAP PDB:3OZJ
PDB:3PCU PDB:3R5M PDBsum:1MV9 PDBsum:1MVC PDBsum:1MZN PDBsum:2P1T
PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0 PDBsum:3DZU
PDBsum:3DZY PDBsum:3E00 PDBsum:3E94 PDBsum:3FUG PDBsum:3KWY
PDBsum:3OAP PDBsum:3OZJ PDBsum:3PCU PDBsum:3R5M PDB:1XLS
PDBsum:1XLS PDB:3R29 PDB:3R2A PDBsum:3R29 PDBsum:3R2A PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
DrugBank:DB00523 DrugBank:DB00926 PDB:1DSZ PDBsum:1DSZ
DrugBank:DB00210 OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:X52773 EMBL:AB307705 EMBL:AC156789 EMBL:AL354796
EMBL:AL669970 EMBL:AL683798 EMBL:BC110998 EMBL:DQ303444
IPI:IPI00418394 PIR:S09592 RefSeq:NP_002948.1 UniGene:Hs.590886
PDB:1BY4 PDB:1FBY PDB:1G1U PDB:1G5Y PDB:1LBD PDB:1RXR PDB:1YNW
PDB:2NLL PDB:3NSP PDB:3NSQ PDB:3UVV PDBsum:1BY4 PDBsum:1FBY
PDBsum:1G1U PDBsum:1G5Y PDBsum:1LBD PDBsum:1RXR PDBsum:1YNW
PDBsum:2NLL PDBsum:3NSP PDBsum:3NSQ PDBsum:3UVV DisProt:DP00062
ProteinModelPortal:P19793 SMR:P19793 DIP:DIP-641N IntAct:P19793
MINT:MINT-98407 STRING:P19793 PhosphoSite:P19793 DMDM:133701
PaxDb:P19793 PRIDE:P19793 DNASU:6256 Ensembl:ENST00000481739
GeneID:6256 KEGG:hsa:6256 UCSC:uc004cfb.2 CTD:6256
GeneCards:GC09P137208 HGNC:HGNC:10477 HPA:CAB004565 HPA:CAB005352
MIM:180245 neXtProt:NX_P19793 PharmGKB:PA34890 InParanoid:P19793
KO:K08524 OMA:KHFLPLD BindingDB:P19793 ChEMBL:CHEMBL2061
EvolutionaryTrace:P19793 GenomeRNAi:6256 NextBio:24295
PMAP-CutDB:P19793 ArrayExpress:P19793 Bgee:P19793 CleanEx:HS_RXRA
Genevestigator:P19793 GermOnline:ENSG00000186350 Uniprot:P19793
Length = 462
Score = 234 (87.4 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 190
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 191 RYQKCLAMGMKRE 203
>RGD|1308419 [details] [associations]
symbol:Rora "RAR-related orphan receptor A" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006809 "nitric oxide biosynthetic process"
evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISO]
[GO:0043030 "regulation of macrophage activation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046068 "cGMP metabolic
process" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0007623 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0030522 GO:GO:0006809 GO:GO:0021702
GO:GO:0046068 GO:GO:0043030 IPI:IPI00780466
Ensembl:ENSRNOT00000057506 UCSC:RGD:1308419 ArrayExpress:F1M505
Uniprot:F1M505
Length = 466
Score = 234 (87.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 41/86 (47%), Positives = 57/86 (66%)
Query: 8 SLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPID 67
S+ ++ IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID
Sbjct: 6 SIAAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLID 61
Query: 68 KTHRNQCRACRLNKCFMSAMNKDDFK 93
+T RN+C+ CRL KC M++D K
Sbjct: 62 RTSRNRCQHCRLQKCLAVGMSRDAVK 87
>ZFIN|ZDB-GENE-061204-2 [details] [associations]
symbol:rorb "RAR-related orphan receptor B"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-061204-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:BX537293 EMBL:CU929335 IPI:IPI00489649
Ensembl:ENSDART00000089748 Bgee:F1R6M2 Uniprot:F1R6M2
Length = 466
Score = 234 (87.4 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLALGMSRDAVK 81
>MGI|MGI:98214 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001890 "placenta development"
evidence=IMP] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003677 "DNA binding" evidence=ISO;IDA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IGI] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;IDA] [GO:0004886 "9-cis retinoic acid receptor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0007507 "heart development" evidence=IMP;TAS]
[GO:0007566 "embryo implantation" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=TAS] [GO:0019048 "virus-host interaction"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0031641 "regulation of myelination"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO;IDA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=TAS] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IGI;IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IGI;IMP;TAS]
[GO:0060485 "mesenchyme development" evidence=TAS] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060978 "angiogenesis involved in
coronary vascular morphogenesis" evidence=TAS] [GO:0061032
"visceral serous pericardium development" evidence=TAS]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98214 GO:GO:0019048 GO:GO:0008285
GO:GO:0005654 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0006954 GO:GO:0045944
GO:GO:0051384 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790 GO:GO:0032526
GO:GO:0060978 GO:GO:0003690 GO:GO:0010629 GO:GO:0001893
GO:GO:0033189 GO:GO:0010269 GO:GO:0031490 GO:GO:0033280
GO:GO:0007566 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 Reactome:REACT_27166 HOVERGEN:HBG005606 GO:GO:0061032
GO:GO:0060528 GO:GO:0060485 GeneTree:ENSGT00690000101777
GO:GO:0035357 PDB:1XDK PDBsum:1XDK GO:GO:0055012 GO:GO:0044323
PDB:3A9E PDBsum:3A9E PDB:1DKF PDBsum:1DKF HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 OMA:KHFLPLD EMBL:M84817 EMBL:X66223
IPI:IPI00467109 PIR:S26668 RefSeq:NP_035435.1 UniGene:Mm.24624
ProteinModelPortal:P28700 SMR:P28700 IntAct:P28700
MINT:MINT-2775018 STRING:P28700 PhosphoSite:P28700 PRIDE:P28700
Ensembl:ENSMUST00000077257 Ensembl:ENSMUST00000166775 GeneID:20181
KEGG:mmu:20181 InParanoid:P28700 BindingDB:P28700 ChEMBL:CHEMBL3084
ChiTaRS:RXRA EvolutionaryTrace:P28700 NextBio:297705 Bgee:P28700
CleanEx:MM_RXRA Genevestigator:P28700 GermOnline:ENSMUSG00000015846
GO:GO:0070644 Uniprot:P28700
Length = 467
Score = 234 (87.4 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 140 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 195
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 196 RYQKCLAMGMKRE 208
>RGD|3610 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001890 "placenta development" evidence=IEP;ISO]
[GO:0001893 "maternal placenta development" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEP]
[GO:0007494 "midgut development" evidence=IEP] [GO:0007507 "heart
development" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation" evidence=IMP]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0019048
"virus-host interaction" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031641 "regulation of myelination"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IEP;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEP] [GO:0033189
"response to vitamin A" evidence=IEP] [GO:0033280 "response to
vitamin D" evidence=IEP] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA;ISO] [GO:0042809
"vitamin D receptor binding" evidence=IEA;ISO] [GO:0042974 "retinoic
acid receptor binding" evidence=IPI] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044323 "retinoic acid-responsive
element binding" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP;IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA;ISO] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA;ISO] [GO:0070644 "vitamin D response element binding"
evidence=IEA;ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0005634 GO:GO:0019048
GO:GO:0008285 GO:GO:0006355 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122 GO:GO:0043065
GO:GO:0000790 GO:GO:0032526 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
GO:GO:0070644 EMBL:L06482 IPI:IPI00188860 PIR:A47278 PIR:I67427
UniGene:Rn.108206 ProteinModelPortal:Q05343 SMR:Q05343 STRING:Q05343
PhosphoSite:Q05343 UCSC:RGD:3610 InParanoid:Q05343 BindingDB:Q05343
ChEMBL:CHEMBL4431 ArrayExpress:Q05343 Genevestigator:Q05343
GermOnline:ENSRNOG00000009446 Uniprot:Q05343
Length = 467
Score = 234 (87.4 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 140 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 195
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 196 RYQKCLAMGMKRE 208
>UNIPROTKB|Q0VJ96 [details] [associations]
symbol:Rxra "Retinoic acid receptor RXR-alpha"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 HOVERGEN:HBG005606 EMBL:CH474001 GO:GO:0060528
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0055012
GO:GO:0044323 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 GO:GO:0070644 UniGene:Rn.108206 EMBL:AM295012
EMBL:AM295013 EMBL:AM392401 IPI:IPI00851118 RefSeq:NP_036937.2
SMR:Q0VJ96 STRING:Q0VJ96 Ensembl:ENSRNOT00000012892 GeneID:25271
KEGG:rno:25271 InParanoid:Q0VJ96 NextBio:605957
Genevestigator:Q0VJ96 Uniprot:Q0VJ96
Length = 467
Score = 234 (87.4 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 140 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 195
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 196 RYQKCLAMGMKRE 208
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 237 (88.5 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 6 DNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
D +L +L+++ C VCGD++SG+HYG +C+GC GFFKRSI +N VYTC+ D C
Sbjct: 141 DQNLNKQLVEL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKD----CV 195
Query: 66 IDKTHRNQCRACRLNKCFMSAMNKD 90
I+K +RN+C+ CRL +C M +D
Sbjct: 196 INKHYRNRCQYCRLQRCIALGMKQD 220
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 237 (88.5 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 6 DNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
D +L +L+++ C VCGD++SG+HYG +C+GC GFFKRSI +N VYTC+ D C
Sbjct: 141 DQNLNKQLVEL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKD----CV 195
Query: 66 IDKTHRNQCRACRLNKCFMSAMNKD 90
I+K +RN+C+ CRL +C M +D
Sbjct: 196 INKHYRNRCQYCRLQRCMSLGMKQD 220
>UNIPROTKB|E1C5M3 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:AADN02059739 EMBL:AADN02059740 EMBL:AADN02059741
EMBL:AADN02059742 EMBL:AADN02059743 EMBL:AADN02059744
EMBL:AADN02059745 EMBL:AADN02059746 EMBL:AADN02059747
EMBL:AADN02059748 EMBL:AADN02059749 EMBL:AADN02059750
IPI:IPI00594386 Ensembl:ENSGALT00000024446 ArrayExpress:E1C5M3
Uniprot:E1C5M3
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 16 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 71
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 72 HCRLQKCLALGMSRDAVK 89
>UNIPROTKB|F1PET8 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0042462 GeneTree:ENSGT00700000104109 OMA:SGHTMRA
EMBL:AAEX03000553 EMBL:AAEX03000554 Ensembl:ENSCAFT00000036494
Uniprot:F1PET8
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 19 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 74
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 75 HCRLQKCLALGMSRDAVK 92
>UNIPROTKB|Q92753 [details] [associations]
symbol:RORB "Nuclear receptor ROR-beta" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045893 GO:GO:0005654 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367 GO:GO:0042462
eggNOG:NOG324222 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 EMBL:Y08639 EMBL:BX647070 EMBL:AL137018
IPI:IPI00023259 IPI:IPI00827604 RefSeq:NP_008845.2
UniGene:Hs.494178 ProteinModelPortal:Q92753 SMR:Q92753
STRING:Q92753 PhosphoSite:Q92753 DMDM:124028630 PRIDE:Q92753
DNASU:6096 Ensembl:ENST00000376896 Ensembl:ENST00000396204
GeneID:6096 KEGG:hsa:6096 UCSC:uc004aji.3 CTD:6096
GeneCards:GC09P077112 HGNC:HGNC:10259 HPA:HPA008393 MIM:601972
neXtProt:NX_Q92753 PharmGKB:PA34631 InParanoid:Q92753 KO:K08533
OMA:SGHTMRA OrthoDB:EOG4KH2TT ChiTaRS:RORB GenomeRNAi:6096
NextBio:23713 ArrayExpress:Q92753 Bgee:Q92753 CleanEx:HS_RORB
Genevestigator:Q92753 GermOnline:ENSG00000198963 Uniprot:Q92753
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 19 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 74
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 75 HCRLQKCLALGMSRDAVK 92
>MGI|MGI:1343464 [details] [associations]
symbol:Rorb "RAR-related orphan receptor beta" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1343464 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0046872 GO:GO:0007623
GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 CTD:6096 KO:K08533 OMA:SGHTMRA OrthoDB:EOG4KH2TT
EMBL:BC024842 EMBL:BC058269 EMBL:DQ779923 EMBL:DQ779924
EMBL:AB258405 IPI:IPI00153341 IPI:IPI00788322 RefSeq:NP_001036819.1
RefSeq:NP_666207.3 UniGene:Mm.276747 ProteinModelPortal:Q8R1B8
SMR:Q8R1B8 STRING:Q8R1B8 PhosphoSite:Q8R1B8 PRIDE:Q8R1B8
Ensembl:ENSMUST00000040153 Ensembl:ENSMUST00000112828
Ensembl:ENSMUST00000112832 GeneID:225998 KEGG:mmu:225998
UCSC:uc008gyc.1 UCSC:uc008gyd.1 NextBio:377911 Bgee:Q8R1B8
CleanEx:MM_RORB Genevestigator:Q8R1B8 GermOnline:ENSMUSG00000036192
Uniprot:Q8R1B8
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 19 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 74
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 75 HCRLQKCLALGMSRDAVK 92
>RGD|1306778 [details] [associations]
symbol:Rorb "RAR-related orphan receptor B" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEP]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=IDA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA;ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO;ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 19 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 74
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 75 HCRLQKCLALGMSRDAVK 92
>UNIPROTKB|P45446 [details] [associations]
symbol:Rorb "Nuclear receptor ROR-beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 234 (87.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T+RN+C+
Sbjct: 19 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRN----CLIDRTNRNRCQ 74
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 75 HCRLQKCLALGMSRDAVK 92
>UNIPROTKB|F1MX52 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060528 "secretory
columnal luminar epithelial cell differentiation involved in
prostate glandular acinus development" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044323
"retinoic acid-responsive element binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0060528 GeneTree:ENSGT00690000101777
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644
EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423
IPI:IPI00722888 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52
Length = 474
Score = 234 (87.4 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 147 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 202
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 203 RYQKCLAMGMKRE 215
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 234 (87.4 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 204 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 259
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 260 RYQKCLATGMKRE 272
>UNIPROTKB|F1P6M9 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 InterPro:IPR021780
Pfam:PF11825 OMA:KHFLPLD EMBL:AAEX03006790
Ensembl:ENSCAFT00000031555 Uniprot:F1P6M9
Length = 486
Score = 234 (87.4 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C IDK RN+C+ C
Sbjct: 159 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYC 214
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 215 RYQKCLAMGMKRE 227
>UNIPROTKB|F1LZZ3 [details] [associations]
symbol:Rora "Protein Rora" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068
GO:GO:0043030 GeneTree:ENSGT00700000104109 IPI:IPI00373337
Ensembl:ENSRNOT00000013142 ArrayExpress:F1LZZ3 Uniprot:F1LZZ3
Length = 457
Score = 233 (87.1 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 5 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 60
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 61 HCRLQKCLAVGMSRDAVK 78
>UNIPROTKB|F1P5Z9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 EMBL:AAEX03016182
Ensembl:ENSCAFT00000026448 Uniprot:F1P5Z9
Length = 458
Score = 233 (87.1 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 6 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 61
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 62 HCRLQKCLAVGMSRDAVK 79
>UNIPROTKB|F1NW94 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00586813
Ensembl:ENSGALT00000018481 ArrayExpress:F1NW94 Uniprot:F1NW94
Length = 562
Score = 235 (87.8 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 5 TDNSLGDRLL----DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS ++ L D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 57 TDNSPNEQALNKVFDL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGTKD- 114
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 115 ---CVINKHHRNRCQYCRLQRCIAFGMKQD 141
>UNIPROTKB|F1NML9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006809 "nitric oxide
biosynthetic process" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0043030
"regulation of macrophage activation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046068 "cGMP metabolic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:AADN02040416
IPI:IPI00581652 Ensembl:ENSGALT00000005967 Uniprot:F1NML9
Length = 469
Score = 233 (87.1 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 16 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 71
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 72 HCRLQKCLAVGMSRDAVK 89
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 234 (87.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 192 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 247
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 248 RYQKCLATGMKRE 260
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 234 (87.4 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 190 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 245
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 246 RYQKCLATGMKRE 258
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 234 (87.4 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 204 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 259
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 260 RYQKCLATGMKRE 272
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 234 (87.4 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 204 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 259
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 260 RYQKCLATGMKRE 272
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 234 (87.4 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 260
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 261 RYQKCLATGMKRE 273
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 234 (87.4 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 260
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 261 RYQKCLATGMKRE 273
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 234 (87.4 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR+I ++ Y+C+ D C +DK RN+C+ C
Sbjct: 204 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNRCQYC 259
Query: 78 RLNKCFMSAMNKD 90
R KC + M ++
Sbjct: 260 RYQKCLATGMKRE 272
>UNIPROTKB|F1P607 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 OMA:VAAQIEI
EMBL:AAEX03016182 Ensembl:ENSCAFT00000026445 Uniprot:F1P607
Length = 487
Score = 233 (87.1 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 15 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 70
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 71 HCRLQKCLAVGMSRDAVK 88
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 235 (87.8 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 5 TDNS--LG-DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
TDNS G +++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 98 TDNSPDQGPNKVFDL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKD-- 154
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 155 --CIINKHHRNRCQYCRLQRCIAFGMKQD 181
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 235 (87.8 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 5 TDNSLGD----RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS + ++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 98 TDNSSSEQGPNKVFDL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKD- 155
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 156 ---CIINKHHRNRCQYCRLQRCIAFGMKQD 182
>UNIPROTKB|F1S075 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043030 "regulation of
macrophage activation" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0030522
GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:CU571371
EMBL:CU618323 Ensembl:ENSSSCT00000005055 Uniprot:F1S075
Length = 506
Score = 233 (87.1 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 63
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 64 HCRLQKCLAVGMSRDAVK 81
>UNIPROTKB|E1BZA2 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0016605 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 GO:GO:0048386
GeneTree:ENSGT00700000104390 OMA:QNSNEMS EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00681663
Ensembl:ENSGALT00000030638 ArrayExpress:E1BZA2 Uniprot:E1BZA2
Length = 639
Score = 235 (87.8 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 5 TDNSLGDRLL----DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS ++ L D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 134 TDNSPNEQALNKVFDL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGTKD- 191
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 192 ---CVINKHHRNRCQYCRLQRCIAFGMKQD 218
>ZFIN|ZDB-GENE-060306-2 [details] [associations]
symbol:roraa "RAR-related orphan receptor A, paralog
a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-060306-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CABZ01027882 EMBL:CABZ01027883 EMBL:CABZ01027884
EMBL:CABZ01027885 EMBL:CU468885 IPI:IPI00995582
ProteinModelPortal:F1QLY4 Ensembl:ENSDART00000121449 Bgee:F1QLY4
Uniprot:F1QLY4
Length = 516
Score = 233 (87.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 64 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKN----CLIDRTSRNRCQ 119
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 120 HCRLQKCLAVGMSRDAVK 137
>UNIPROTKB|F1N7R0 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043030 "regulation of
macrophage activation" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0030522
GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 CTD:6095 KO:K08532 OMA:VAAQIEI
EMBL:DAAA02028787 EMBL:DAAA02028778 EMBL:DAAA02028779
EMBL:DAAA02028780 EMBL:DAAA02028781 EMBL:DAAA02028782
EMBL:DAAA02028783 EMBL:DAAA02028784 EMBL:DAAA02028785
EMBL:DAAA02028786 IPI:IPI00708401 RefSeq:NP_001179790.1
UniGene:Bt.56061 Ensembl:ENSBTAT00000021144 GeneID:535597
KEGG:bta:535597 NextBio:20876785 Uniprot:F1N7R0
Length = 523
Score = 233 (87.1 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 71 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 126
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 127 HCRLQKCLAVGMSRDAVK 144
>MGI|MGI:104661 [details] [associations]
symbol:Rora "RAR-related orphan receptor alpha" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0043030 "regulation
of macrophage activation" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IDA] [GO:0046068 "cGMP metabolic process"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:104661 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0030522 GO:GO:0006809
GO:GO:0021702 GO:GO:0046068 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0043030 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 CTD:6095 HOGENOM:HOG000010200
HOVERGEN:HBG106848 KO:K08532 OMA:VAAQIEI ChiTaRS:RORA EMBL:U53228
EMBL:Y08640 EMBL:Z82994 EMBL:S82720 EMBL:D45910 EMBL:BC003757
IPI:IPI00122512 IPI:IPI00395039 PIR:S68517 RefSeq:NP_038674.1
UniGene:Mm.378450 UniGene:Mm.391890 UniGene:Mm.427266
UniGene:Mm.490614 ProteinModelPortal:P51448 SMR:P51448
DIP:DIP-35351N IntAct:P51448 STRING:P51448 PhosphoSite:P51448
PRIDE:P51448 Ensembl:ENSMUST00000034766 Ensembl:ENSMUST00000113624
GeneID:19883 KEGG:mmu:19883 InParanoid:P51448 OrthoDB:EOG4GHZP3
NextBio:297388 Bgee:P51448 CleanEx:MM_RORA Genevestigator:P51448
GermOnline:ENSMUSG00000032238 Uniprot:P51448
Length = 523
Score = 233 (87.1 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 71 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 126
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 127 HCRLQKCLAVGMSRDAVK 144
>UNIPROTKB|F1SQP7 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0048386
GeneTree:ENSGT00700000104390 KO:K08543 OMA:QNSNEMS EMBL:FP236518
RefSeq:XP_003126756.1 Ensembl:ENSSSCT00000000986 GeneID:100516014
KEGG:ssc:100516014 Uniprot:F1SQP7
Length = 605
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 5 TDNSLGD----RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS + + D+ C VCGDR+SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 98 TDNSASEQGPNKGFDL-CVVCGDRASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKD- 155
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 156 ---CIINKHHRNRCQYCRLQRCIAFGMKQD 182
>ZFIN|ZDB-GENE-990415-242 [details] [associations]
symbol:rxrbb "retinoid x receptor, beta b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:U29941 IPI:IPI00480966 PIR:I50516 RefSeq:NP_571313.1
UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486
KEGG:dre:30486 CTD:30486 NextBio:20806878 ArrayExpress:Q90417
Uniprot:Q90417
Length = 422
Score = 230 (86.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D K C +DK RN+C+ C
Sbjct: 90 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCR---DNK-ECLVDKRQRNRCQYC 145
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 146 RYQKCLAMGMKRE 158
>WB|WBGene00003701 [details] [associations]
symbol:nhr-111 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000260820 GeneTree:ENSGT00700000104390 EMBL:Z83109
PIR:T22203 RefSeq:NP_507060.2 UniGene:Cel.3575
ProteinModelPortal:O45521 SMR:O45521 DIP:DIP-26766N IntAct:O45521
MINT:MINT-1037788 STRING:O45521 EnsemblMetazoa:F44G3.9
GeneID:185757 KEGG:cel:CELE_F44G3.9 UCSC:F44G3.9 CTD:185757
WormBase:F44G3.9 eggNOG:NOG277339 OMA:LAYEVEM NextBio:929390
Uniprot:O45521
Length = 311
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD S+G HYG+ +C GCSGFF+R++ V+ C GD G+C IDK +RN+C++C
Sbjct: 42 CAVCGDTSNGNHYGVPTCFGCSGFFRRTVRNKLVHGCW-NGD--GNCVIDKANRNRCKSC 98
Query: 78 RLNKCFMSAMNKD 90
R+ KCF MNK+
Sbjct: 99 RIKKCFKKGMNKN 111
>UNIPROTKB|O45521 [details] [associations]
symbol:nhr-111 "Nuclear hormone receptor family member
nhr-111" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
GeneTree:ENSGT00700000104390 EMBL:Z83109 PIR:T22203
RefSeq:NP_507060.2 UniGene:Cel.3575 ProteinModelPortal:O45521
SMR:O45521 DIP:DIP-26766N IntAct:O45521 MINT:MINT-1037788
STRING:O45521 EnsemblMetazoa:F44G3.9 GeneID:185757
KEGG:cel:CELE_F44G3.9 UCSC:F44G3.9 CTD:185757 WormBase:F44G3.9
eggNOG:NOG277339 OMA:LAYEVEM NextBio:929390 Uniprot:O45521
Length = 311
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD S+G HYG+ +C GCSGFF+R++ V+ C GD G+C IDK +RN+C++C
Sbjct: 42 CAVCGDTSNGNHYGVPTCFGCSGFFRRTVRNKLVHGCW-NGD--GNCVIDKANRNRCKSC 98
Query: 78 RLNKCFMSAMNKD 90
R+ KCF MNK+
Sbjct: 99 RIKKCFKKGMNKN 111
>UNIPROTKB|P35398 [details] [associations]
symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006809 "nitric oxide biosynthetic process" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0043030 "regulation of macrophage activation"
evidence=IEA] [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006809
EMBL:CH471082 GO:GO:0006367 EMBL:AC087385 GO:GO:0021702
GO:GO:0046068 Reactome:REACT_24941 GO:GO:0043030 eggNOG:NOG324222
EMBL:U04897 EMBL:U04898 EMBL:U04899 EMBL:L14611 EMBL:HQ692818
EMBL:AC009560 EMBL:AC012404 EMBL:AC022898 EMBL:AC079068
EMBL:AC107241 EMBL:AC107905 EMBL:BC008831 EMBL:BC100987
EMBL:BC100988 EMBL:BC100989 EMBL:BC100990 IPI:IPI00018225
IPI:IPI00107635 IPI:IPI00218544 IPI:IPI00243584 PIR:A53196
PIR:A56856 PIR:B53196 PIR:C53196 RefSeq:NP_002934.1
RefSeq:NP_599022.1 RefSeq:NP_599023.1 RefSeq:NP_599024.1
UniGene:Hs.560343 UniGene:Hs.655155 PDB:1N83 PDB:1S0X PDBsum:1N83
PDBsum:1S0X ProteinModelPortal:P35398 SMR:P35398 DIP:DIP-29938N
IntAct:P35398 MINT:MINT-2855668 STRING:P35398 PhosphoSite:P35398
DMDM:548814 PRIDE:P35398 Ensembl:ENST00000261523
Ensembl:ENST00000309157 Ensembl:ENST00000335670
Ensembl:ENST00000449337 GeneID:6095 KEGG:hsa:6095 UCSC:uc002agt.4
UCSC:uc002agv.3 UCSC:uc002agw.3 UCSC:uc002agx.3 CTD:6095
GeneCards:GC15M060780 HGNC:HGNC:10258 HPA:CAB009861 MIM:600825
neXtProt:NX_P35398 PharmGKB:PA34630 HOGENOM:HOG000010200
HOVERGEN:HBG106848 InParanoid:P35398 KO:K08532 OMA:VAAQIEI
PhylomeDB:P35398 BindingDB:P35398 ChEMBL:CHEMBL5868 ChiTaRS:RORA
EvolutionaryTrace:P35398 GenomeRNAi:6095 NextBio:23703
ArrayExpress:P35398 Bgee:P35398 CleanEx:HS_RORA
Genevestigator:P35398 GermOnline:ENSG00000069667 Uniprot:P35398
Length = 556
Score = 233 (87.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS N Y+C Q + C ID+T RN+C+
Sbjct: 104 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKN----CLIDRTSRNRCQ 159
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 160 HCRLQKCLAVGMSRDAVK 177
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 231 (86.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDRSSGKHYG+YSC+GC GFFKR++ ++ YTC+ D C +DK RN+C+ C
Sbjct: 125 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKD----CLVDKRQRNRCQYC 180
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 181 RYQKCLAMGMKRE 193
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 5 TDNSLGD----RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
TDNS + ++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 98 TDNSSSEQGPNKVFDL-CVVCGDKASGRHYGEVTCEGCKGFFKRSIRKNLVYSCRGSKD- 155
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 156 ---CIINKHHRNRCQYCRLQRCIAFGMKQD 182
>UNIPROTKB|C9JKS0 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC090954 EMBL:AC090937
HGNC:HGNC:7972 ChiTaRS:NR2C2 IPI:IPI00902492
ProteinModelPortal:C9JKS0 SMR:C9JKS0 STRING:C9JKS0
Ensembl:ENST00000437120 HOGENOM:HOG000213778 ArrayExpress:C9JKS0
Bgee:C9JKS0 Uniprot:C9JKS0
Length = 205
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 136 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 191
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 192 RLKKCLEMGMKME 204
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 232 (86.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 6 DNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
D +L + +++ C VCGD++SG+HYG +C+GC GFFKRSI +N +YTC+ D C
Sbjct: 141 DQNLNKQFVEL-CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKD----CV 195
Query: 66 IDKTHRNQCRACRLNKCFMSAMNKD 90
I+K +RN+C+ CRL +C M +D
Sbjct: 196 INKHYRNRCQYCRLQRCISLGMKQD 220
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 231 (86.4 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 39/80 (48%), Positives = 56/80 (70%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
+++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D C I+K H
Sbjct: 95 NKVFDL-CVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKD----CVINKHH 149
Query: 71 RNQCRACRLNKCFMSAMNKD 90
RN+C+ CRL +C M +D
Sbjct: 150 RNRCQYCRLQRCIAFGMKQD 169
>RGD|3200 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048386 "positive regulation of retinoic
acid receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3200 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 EMBL:CH473960 HSSP:P03372 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:L26398 EMBL:BC061822
IPI:IPI00208150 RefSeq:NP_665723.1 UniGene:Rn.79894
ProteinModelPortal:Q8VIJ4 SMR:Q8VIJ4 STRING:Q8VIJ4 PhosphoSite:Q8VIJ4
PRIDE:Q8VIJ4 Ensembl:ENSRNOT00000009578 GeneID:252924 KEGG:rno:252924
UCSC:RGD:3200 InParanoid:Q8VIJ4 NextBio:624089 ArrayExpress:Q8VIJ4
Genevestigator:Q8VIJ4 Uniprot:Q8VIJ4
Length = 590
Score = 231 (86.4 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 43/89 (48%), Positives = 61/89 (68%)
Query: 5 TDNS--LG-DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLK 61
T+NS G +++ D+ C VCGD++SG+HYG +C+GC GFFKRSI +N VY+C+ D
Sbjct: 86 TENSPDQGPNKVFDL-CVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKD-- 142
Query: 62 GHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL +C M +D
Sbjct: 143 --CIINKHHRNRCQYCRLQRCIAFGMKQD 169
>RGD|3534 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001972 "retinoic acid binding" evidence=ISO]
[GO:0003417 "growth plate cartilage development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006950 "response to stress" evidence=IEP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007565 "female pregnancy" evidence=IEP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0008584 "male
gonad development" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030425
"dendrite" evidence=ISO;IDA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISO] [GO:0030850
"prostate gland development" evidence=IEP] [GO:0030852 "regulation of
granulocyte differentiation" evidence=ISO] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=IDA] [GO:0032355 "response to estradiol
stimulus" evidence=IEP;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=ISO] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=ISO] [GO:0032753
"positive regulation of interleukin-4 production" evidence=ISO]
[GO:0032754 "positive regulation of interleukin-5 production"
evidence=ISO] [GO:0033189 "response to vitamin A" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0042981 "regulation
of apoptotic process" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043422
"protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0044323 "retinoic acid-responsive element binding" evidence=ISO]
[GO:0045471 "response to ethanol" evidence=IDA] [GO:0045596 "negative
regulation of cell differentiation" evidence=ISO] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=ISO] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IDA] [GO:0045787 "positive regulation of
cell cycle" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0045947 "negative regulation of
translational initiation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IDA] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=ISO] [GO:0060010 "Sertoli cell fate
commitment" evidence=ISO] [GO:0060591 "chondroblast differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 RGD:3534 GO:GO:0005634 GO:GO:0048471
GO:GO:0048167 GO:GO:0008285 GO:GO:0006950 GO:GO:0042981 GO:GO:0032355
GO:GO:0045471 GO:GO:0046872 GO:GO:0008144 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0034097 GO:GO:0007565 GO:GO:0008584
GO:GO:0048027 GO:GO:0045666 GO:GO:0030850 GO:GO:0033189 GO:GO:0000900
GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0003708 HSSP:P10276
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 UniGene:Rn.91057 EMBL:AJ002940
IPI:IPI00389542 ProteinModelPortal:Q9QWT4 STRING:Q9QWT4 UCSC:RGD:3534
InParanoid:Q9QWT4 Genevestigator:Q9QWT4 Uniprot:Q9QWT4
Length = 302
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 70 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 125
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 126 CRLQKCFEVGMSKESVR 142
>RGD|3535 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0003417 "growth plate cartilage
development" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003708 "retinoic
acid receptor activity" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0021756 "striatum
development" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043068 "positive
regulation of programmed cell death" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046965 "retinoid X receptor binding"
evidence=IPI] [GO:0048048 "embryonic eye morphogenesis" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA]
[GO:0048566 "embryonic digestive tract development" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 RGD:3535 GO:GO:0005634 GO:GO:0046872 GO:GO:0008144
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045666 GO:GO:0031641
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 HSSP:P10826
EMBL:AJ002942 IPI:IPI00763374 UniGene:Rn.232243
ProteinModelPortal:O54746 STRING:O54746 Genevestigator:O54746
Uniprot:O54746
Length = 291
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N +YTC + C I+K RN+C+
Sbjct: 80 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKN----CVINKVTRNRCQY 135
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 136 CRLQKCFEVGMSKESVR 152
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 223 (83.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 27 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CVINKVTRNRCQY 82
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 83 CRLQKCFEVGMSKESVR 99
>UNIPROTKB|F1NWE8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI00681960 ProteinModelPortal:F1NWE8
Ensembl:ENSGALT00000018430 ArrayExpress:F1NWE8 Uniprot:F1NWE8
Length = 368
Score = 223 (83.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 28 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CVINKVTRNRCQY 83
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 84 CRLQKCFEVGMSKESVR 100
>UNIPROTKB|F1SGE6 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070384 "Harderian gland development" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060534 "trachea cartilage development"
evidence=IEA] [GO:0048048 "embryonic eye morphogenesis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0003708 CTD:5916 GO:GO:0070384
GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529 GO:GO:0003430
GO:GO:0060534 EMBL:CU550678 RefSeq:XP_001924421.3 UniGene:Ssc.97565
Ensembl:ENSSSCT00000000277 GeneID:397221 KEGG:ssc:397221
OMA:TFNSMRS Uniprot:F1SGE6
Length = 447
Score = 226 (84.6 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 78 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 133
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 134 CRLQKCFEVGMSKE 147
>FB|FBgn0037436 [details] [associations]
symbol:Hr83 "Hormone receptor 83" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003707
"steroid hormone receptor activity" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 EMBL:AE014297
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104390 HSSP:P19793
eggNOG:NOG310907 EMBL:BT128747 RefSeq:NP_649647.1 UniGene:Dm.27222
SMR:Q9VI12 STRING:Q9VI12 EnsemblMetazoa:FBtr0081713 GeneID:40783
KEGG:dme:Dmel_CG10296 UCSC:CG10296-RA CTD:40783 FlyBase:FBgn0037436
InParanoid:Q9VI12 KO:K08709 OMA:LILCRKE OrthoDB:EOG4JDFP7
GenomeRNAi:40783 NextBio:820567 Uniprot:Q9VI12
Length = 278
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 39/71 (54%), Positives = 46/71 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD+SSGKHYG+ CDGCS FFKRS+ R Y C A L G+C +DK RN C +C
Sbjct: 7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIA---LVGNCVVDKARRNWCPSC 63
Query: 78 RLNKCFMSAMN 88
R +C MN
Sbjct: 64 RFQRCLAVGMN 74
>UNIPROTKB|P13631 [details] [associations]
symbol:RARG "Retinoic acid receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003430 "growth plate cartilage chondrocyte growth"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0031641 "regulation of
myelination" evidence=IEA] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0060534 "trachea
cartilage development" evidence=IEA] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IEA] [GO:0061037 "negative
regulation of cartilage development" evidence=IEA] [GO:0070384
"Harderian gland development" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032526 "response
to retinoic acid" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=TAS] [GO:0008361 "regulation of cell
size" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043068 "positive regulation
of programmed cell death" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0048048 "embryonic eye morphogenesis"
evidence=ISS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0016021
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 EMBL:CH471054
GO:GO:0003700 GO:GO:0008361 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
GO:GO:0048384 GO:GO:0048048 DrugBank:DB00459 GO:GO:0060740
GO:GO:0006367 GO:GO:0060070 GO:GO:0046965 GO:GO:0032331
HOVERGEN:HBG005606 GO:GO:0003708 EMBL:AC021072 CTD:5916
GO:GO:0070384 GO:GO:0061037 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB00799 EMBL:M24857 EMBL:M57707 EMBL:M38258 EMBL:AK297023
EMBL:AK297277 EMBL:AK316259 EMBL:AC073573 EMBL:BC093727
EMBL:BC093729 EMBL:M32074 EMBL:X57280 EMBL:AJ250835 EMBL:AY013703
EMBL:AY013704 IPI:IPI00427809 IPI:IPI00465344 IPI:IPI00788710
PIR:A33903 PIR:C35991 RefSeq:NP_000957.1 RefSeq:NP_001036193.1
RefSeq:NP_001230659.1 RefSeq:NP_001230661.1 UniGene:Hs.1497
UniGene:Hs.733399 PDB:1EXA PDB:1EXX PDB:1FCX PDB:1FCY PDB:1FCZ
PDB:1FD0 PDB:2LBD PDB:3LBD PDB:4LBD PDBsum:1EXA PDBsum:1EXX
PDBsum:1FCX PDBsum:1FCY PDBsum:1FCZ PDBsum:1FD0 PDBsum:2LBD
PDBsum:3LBD PDBsum:4LBD ProteinModelPortal:P13631 SMR:P13631
IntAct:P13631 STRING:P13631 PhosphoSite:P13631 DMDM:133498
PaxDb:P13631 PRIDE:P13631 DNASU:5916 Ensembl:ENST00000327550
Ensembl:ENST00000338561 Ensembl:ENST00000394426
Ensembl:ENST00000425354 Ensembl:ENST00000543726 GeneID:5916
KEGG:hsa:5916 UCSC:uc001sce.3 GeneCards:GC12M053604
H-InvDB:HIX0129677 HGNC:HGNC:9866 MIM:180190 neXtProt:NX_P13631
PharmGKB:PA34227 InParanoid:P13631 KO:K08529 OMA:RSPQPDQ
PhylomeDB:P13631 BindingDB:P13631 ChEMBL:CHEMBL2003
EvolutionaryTrace:P13631 GenomeRNAi:5916 NextBio:23030
ArrayExpress:P13631 Bgee:P13631 CleanEx:HS_RARG
Genevestigator:P13631 GermOnline:ENSG00000172819 GO:GO:0003430
GO:GO:0060534 Uniprot:P13631
Length = 454
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 144
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 145 CRLQKCFEVGMSKE 158
>UNIPROTKB|Q08DD4 [details] [associations]
symbol:RARG "RARG protein" species:9913 "Bos taurus"
[GO:0070384 "Harderian gland development" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060534 "trachea cartilage development" evidence=IEA]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 HOVERGEN:HBG005606 GO:GO:0003708
CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:DAAA02012865
EMBL:BC123809 IPI:IPI00707092 RefSeq:NP_001124228.1
UniGene:Bt.53782 SMR:Q08DD4 STRING:Q08DD4
Ensembl:ENSBTAT00000009984 GeneID:540425 KEGG:bta:540425
InParanoid:Q08DD4 NextBio:20878630 Uniprot:Q08DD4
Length = 458
Score = 226 (84.6 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 144
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 145 CRLQKCFEVGMSKE 158
>UNIPROTKB|F1PN60 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 CTD:5916
GeneTree:ENSGT00680000099662 KO:K08529 OMA:RSPQPDQ
EMBL:AAEX03014990 EMBL:AAEX03014987 EMBL:AAEX03014988
EMBL:AAEX03014989 RefSeq:XP_849260.2 Ensembl:ENSCAFT00000011309
GeneID:486508 KEGG:cfa:486508 Uniprot:F1PN60
Length = 458
Score = 226 (84.6 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 144
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 145 CRLQKCFEVGMSKE 158
>MGI|MGI:97858 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010468 "regulation of gene expression" evidence=IGI]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IMP] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0035264 "multicellular organism growth" evidence=IGI]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043068 "positive regulation of programmed cell
death" evidence=IGI] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IC;IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IMP] [GO:0048048 "embryonic eye
morphogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IMP] [GO:0048608 "reproductive
structure development" evidence=IMP] [GO:0048732 "gland
development" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0060348 "bone development" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP] [GO:0060429
"epithelium development" evidence=IMP] [GO:0060534 "trachea
cartilage development" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP] [GO:0070384
"Harderian gland development" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97858
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116 GO:GO:0048384 GO:GO:0048048
GO:GO:0060740 GO:GO:0046965 GO:GO:0032331 HOVERGEN:HBG005606
GO:GO:0003708 CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:X15848
EMBL:M34475 EMBL:M34476 EMBL:AK148064 EMBL:BC012923 EMBL:BC013709
EMBL:M32068 EMBL:M32069 EMBL:M32070 IPI:IPI00122863 IPI:IPI00320178
IPI:IPI00885347 PIR:B34714 PIR:S05052 RefSeq:NP_001036192.1
RefSeq:NP_035374.3 UniGene:Mm.1273 ProteinModelPortal:P18911
SMR:P18911 DIP:DIP-42822N MINT:MINT-2834553 STRING:P18911
PhosphoSite:P18911 PRIDE:P18911 Ensembl:ENSMUST00000043172
Ensembl:ENSMUST00000063339 GeneID:19411 KEGG:mmu:19411
UCSC:uc007she.1 InParanoid:P18911 BindingDB:P18911
ChEMBL:CHEMBL4177 NextBio:296533 Bgee:P18911 CleanEx:MM_RARG
Genevestigator:P18911 GermOnline:ENSMUSG00000001288 Uniprot:P18911
Length = 458
Score = 226 (84.6 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 144
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 145 CRLQKCFEVGMSKE 158
>RGD|1583230 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002063 "chondrocyte development" evidence=ISO] [GO:0003417
"growth plate cartilage development" evidence=ISO] [GO:0003430
"growth plate cartilage chondrocyte growth" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation"
evidence=IEA;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043068 "positive regulation of
programmed cell death" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=IEA;ISO]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO;IMP] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060349 "bone morphogenesis"
evidence=ISO] [GO:0060429 "epithelium development" evidence=ISO]
[GO:0060534 "trachea cartilage development" evidence=IEA;ISO]
[GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA;ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA;ISO] [GO:0070384 "Harderian gland
development" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1583230 GO:GO:0008285 GO:GO:0009952
GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0043065 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0031641 GO:GO:0003708 CTD:5916
GO:GO:0070384 GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529
GO:GO:0003430 GO:GO:0060534 IPI:IPI00914166 RefSeq:NP_001128722.1
UniGene:Rn.198797 Ensembl:ENSRNOT00000016801 GeneID:685072
KEGG:rno:685072 UCSC:RGD:1583230 ChEMBL:CHEMBL2630 NextBio:728895
ArrayExpress:D3ZWV0 Uniprot:D3ZWV0
Length = 485
Score = 226 (84.6 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 116 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 171
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 172 CRLQKCFEVGMSKE 185
>UNIPROTKB|E2R3A8 [details] [associations]
symbol:E2R3A8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 ProteinModelPortal:E2R3A8 Ensembl:ENSCAFT00000024577
Uniprot:E2R3A8
Length = 415
Score = 224 (83.9 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 43/91 (47%), Positives = 57/91 (62%)
Query: 4 GT-DNSLGDRLLDIP---CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGD 59
GT S GD+ P C VCGD+SSGKHYG ++C+GC FFKRS+ +N +TC+A D
Sbjct: 62 GTLGGSSGDKAQGQPPINCLVCGDKSSGKHYGQFTCEGCKSFFKRSVGKNLTFTCQANQD 121
Query: 60 LKGHCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C +D+ RNQC+ CRL KC M ++
Sbjct: 122 ----CRVDQYRRNQCQFCRLKKCIDVGMKRE 148
>ZFIN|ZDB-GENE-070314-1 [details] [associations]
symbol:rargb "retinoic acid receptor, gamma b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 OrthoDB:EOG4F7NK7
EMBL:EF028131 IPI:IPI00679293 RefSeq:NP_001076779.1
UniGene:Dr.135572 ProteinModelPortal:A2T928 SMR:A2T928
STRING:A2T928 GeneID:100034753 KEGG:dre:100034753 CTD:100034753
NextBio:20788475 Uniprot:A2T928
Length = 489
Score = 226 (84.6 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 64 PCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CQINKVTRNRCQY 119
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 120 CRLRKCFEVGMSKE 133
>ZFIN|ZDB-GENE-980526-531 [details] [associations]
symbol:rarga "retinoic acid receptor gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-980526-531 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:BX465864 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX546466 IPI:IPI00817162
Ensembl:ENSDART00000103158 ArrayExpress:F1RAM8 Bgee:F1RAM8
Uniprot:F1RAM8
Length = 507
Score = 226 (84.6 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ SC+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 84 PCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKN----CQINKVTRNRCQY 139
Query: 77 CRLNKCFMSAMNKD 90
CRL KCF M+K+
Sbjct: 140 CRLQKCFEVGMSKE 153
>UNIPROTKB|F1N9Q8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 OMA:QEVFVCI EMBL:AADN02001127
EMBL:AADN02001120 EMBL:AADN02001121 EMBL:AADN02001122
EMBL:AADN02001123 EMBL:AADN02001124 EMBL:AADN02001125
EMBL:AADN02001126 IPI:IPI00821263 ProteinModelPortal:F1N9Q8
Ensembl:ENSGALT00000029066 ArrayExpress:F1N9Q8 Uniprot:F1N9Q8
Length = 415
Score = 223 (83.6 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 81 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CVINKVTRNRCQY 136
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 137 CRLQKCFEVGMSKESVR 153
>UNIPROTKB|D6RBI3 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 HGNC:HGNC:9865 EMBL:AC093416
EMBL:AC092422 EMBL:AC098477 EMBL:AC133141 EMBL:AC133797
IPI:IPI00967715 ProteinModelPortal:D6RBI3 SMR:D6RBI3
Ensembl:ENST00000383772 ArrayExpress:D6RBI3 Bgee:D6RBI3
Uniprot:D6RBI3
Length = 402
Score = 222 (83.2 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N +YTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKN----CVINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>WB|WBGene00022423 [details] [associations]
symbol:nhr-41 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0019915 GeneTree:ENSGT00700000104390 EMBL:FO081581
EMBL:FO080407 RefSeq:NP_500073.2 ProteinModelPortal:Q3V5L2
SMR:Q3V5L2 EnsemblMetazoa:Y104H12A.1 GeneID:190865
KEGG:cel:CELE_Y104H12A.1 UCSC:Y104H12A.1 CTD:190865
WormBase:Y104H12A.1 InParanoid:Q3V5L2 OMA:MEHIWRM NextBio:947228
ArrayExpress:Q3V5L2 Uniprot:Q3V5L2
Length = 657
Score = 227 (85.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 38/73 (52%), Positives = 49/73 (67%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRSI + Y C++Q D CP+ K HRN+C+ C
Sbjct: 194 CVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKD----CPVTKFHRNRCQYC 249
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 250 RLRKCLSMGMRSE 262
>UNIPROTKB|D4A6Q3 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 IPI:IPI00949177
Ensembl:ENSRNOT00000065435 ArrayExpress:D4A6Q3 Uniprot:D4A6Q3
Length = 406
Score = 222 (83.2 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 31 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 86
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 87 CRLQKCFEVGMSKESVR 103
>UNIPROTKB|F1P0B9 [details] [associations]
symbol:F1P0B9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104390
EMBL:AADN02014532 EMBL:AADN02014533 IPI:IPI00822185
ProteinModelPortal:F1P0B9 Ensembl:ENSGALT00000013876
ArrayExpress:F1P0B9 Uniprot:F1P0B9
Length = 443
Score = 223 (83.6 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 103 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 158
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 159 RLKKCLEMGMKME 171
>UNIPROTKB|F6Y5T4 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
Ensembl:ENSCAFT00000024577 EMBL:AAEX03026796 OMA:NDQVALL
Uniprot:F6Y5T4
Length = 414
Score = 222 (83.2 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 38/75 (50%), Positives = 51/75 (68%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
I C VCGD+SSGKHYG ++C+GC FFKRS+ +N +TC+A D C +D+ RNQC+
Sbjct: 77 INCLVCGDKSSGKHYGQFTCEGCKSFFKRSVGKNLTFTCQANQD----CRVDQYRRNQCQ 132
Query: 76 ACRLNKCFMSAMNKD 90
CRL KC M ++
Sbjct: 133 FCRLKKCIDVGMKRE 147
>UNIPROTKB|P22448 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IDA] [GO:0071729 "beak
morphogenesis" evidence=IDA] [GO:0032526 "response to retinoic
acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0032526 GO:GO:0035108
GO:GO:0032331 GO:GO:0071729 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 eggNOG:NOG297448 GeneTree:ENSGT00680000099662
HOGENOM:HOG000010312 EMBL:X56674 EMBL:X57341 EMBL:X57340
EMBL:X57339 EMBL:S75943 EMBL:X59473 EMBL:S63196 IPI:IPI00580878
IPI:IPI00589689 PIR:A43786 PIR:I51272 PIR:S13512 RefSeq:NP_990657.1
UniGene:Gga.2668 UniGene:Gga.51498 ProteinModelPortal:P22448
SMR:P22448 STRING:P22448 Ensembl:ENSGALT00000037748 GeneID:396266
KEGG:gga:396266 CTD:5915 InParanoid:P22448 KO:K08528
NextBio:20816318 ArrayExpress:P22448 Uniprot:P22448
Length = 455
Score = 223 (83.6 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CVINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|E2R2A6 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0048048 "embryonic
eye morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0048566 GO:GO:0035264
GO:GO:0035116 GO:GO:0048048 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 GO:GO:0003708 GO:GO:0061037
GO:GO:0055012 GeneTree:ENSGT00680000099662 CTD:5915 KO:K08528
OMA:QEVFVCI EMBL:AAEX03013556 RefSeq:XP_850755.1
Ensembl:ENSCAFT00000009235 GeneID:477045 KEGG:cfa:477045
NextBio:20852594 Uniprot:E2R2A6
Length = 448
Score = 222 (83.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N +YTC + C I+K RN+C+
Sbjct: 80 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKN----CVINKVTRNRCQY 135
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 136 CRLQKCFEVGMSKESVR 152
>UNIPROTKB|P10826 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048566
"embryonic digestive tract development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0008285 GO:GO:0005654 GO:GO:0022008 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0048048
DrugBank:DB00459 GO:GO:0006367 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 GO:GO:0055012 PDB:4DM6 PDB:4DM8 PDBsum:4DM6
PDBsum:4DM8 DrugBank:DB00523 DrugBank:DB00926 eggNOG:NOG297448
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB04942 DrugBank:DB00799 CTD:5915 KO:K08528 EMBL:X07282
EMBL:Y00291 EMBL:AF157483 EMBL:BC060794 EMBL:X56849 EMBL:X77664
EMBL:X04014 EMBL:M57445 IPI:IPI00022989 IPI:IPI00219014
IPI:IPI00745428 PIR:S02827 PIR:S49021 RefSeq:NP_000956.2
RefSeq:NP_057236.1 UniGene:Hs.654490 UniGene:Hs.733004 PDB:1HRA
PDB:1XAP PDBsum:1HRA PDBsum:1XAP ProteinModelPortal:P10826
SMR:P10826 IntAct:P10826 MINT:MINT-1180428 STRING:P10826
DMDM:17380507 PRIDE:P10826 DNASU:5915 Ensembl:ENST00000330688
Ensembl:ENST00000404969 Ensembl:ENST00000437042
Ensembl:ENST00000458646 GeneID:5915 KEGG:hsa:5915 UCSC:uc003cdi.2
GeneCards:GC03P025194 HGNC:HGNC:9865 HPA:CAB002617 HPA:HPA004174
MIM:180220 neXtProt:NX_P10826 PharmGKB:PA34226 OMA:QEVFVCI
PhylomeDB:P10826 BindingDB:P10826 ChEMBL:CHEMBL2008
EvolutionaryTrace:P10826 GenomeRNAi:5915 NextBio:23024
ArrayExpress:P10826 Bgee:P10826 CleanEx:HS_RARB
Genevestigator:P10826 GermOnline:ENSG00000077092 Uniprot:P10826
Length = 455
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N +YTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKN----CVINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|P51126 [details] [associations]
symbol:rara "Retinoic acid receptor alpha" species:8355
"Xenopus laevis" [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IMP] [GO:0050769 "positive regulation
of neurogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006351
GO:GO:0050769 GO:GO:0048384 GO:GO:0021955 HOVERGEN:HBG005606
GO:GO:0003708 EMBL:L11445 PIR:A41977 ProteinModelPortal:P51126
SMR:P51126 Xenbase:XB-GENE-865415 Uniprot:P51126
Length = 458
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|Q499N1 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001972 "retinoic acid binding" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0032689
"negative regulation of interferon-gamma production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032736 "positive regulation of
interleukin-13 production" evidence=IEA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IEA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043277 "apoptotic cell clearance" evidence=IEA] [GO:0043422
"protein kinase B binding" evidence=IEA] [GO:0043551 "regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045947
"negative regulation of translational initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051018 "protein kinase A binding" evidence=IEA] [GO:0051099
"positive regulation of binding" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IMP] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071391
"cellular response to estrogen stimulus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0014068 GO:GO:0051897
EMBL:CH473948 HOVERGEN:HBG005606 GO:GO:0035014 GO:GO:0003708
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 CTD:5914 UniGene:Rn.91057 EMBL:BC099830 IPI:IPI00212283
RefSeq:NP_113716.2 SMR:Q499N1 STRING:Q499N1
Ensembl:ENSRNOT00000008659 GeneID:24705 KEGG:rno:24705
ChEMBL:CHEMBL2269 NextBio:604175 Genevestigator:Q499N1
Uniprot:Q499N1
Length = 459
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 84 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 139
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 140 CRLQKCFEVGMSKESVR 156
>UNIPROTKB|Q90966 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032526 "response to
retinoic acid" evidence=IDA] [GO:0021575 "hindbrain morphogenesis"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0021575
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 KO:K08527
CTD:5914 EMBL:X73972 EMBL:X78335 IPI:IPI00603905 IPI:IPI00604270
PIR:I50674 RefSeq:NP_989867.1 UniGene:Gga.112
ProteinModelPortal:Q90966 SMR:Q90966 STRING:Q90966 GeneID:395213
KEGG:gga:395213 NextBio:20815302 Uniprot:Q90966
Length = 460
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>FB|FBgn0003964 [details] [associations]
symbol:usp "ultraspiracle" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0008232 "activator ecdysone receptor
complex" evidence=IDA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=IDA;NAS]
[GO:0007552 "metamorphosis" evidence=NAS] [GO:0045596 "negative
regulation of cell differentiation" evidence=TAS] [GO:0005700
"polytene chromosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0035072
"ecdysone-mediated induction of salivary gland cell autophagic cell
death" evidence=NAS] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0040034 "regulation of development, heterochronic"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005500 "juvenile hormone binding" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0030425
"dendrite" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0035075 "response to ecdysone" evidence=IMP]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0042803
GO:GO:0046872 GO:GO:0030425 EMBL:AE014298 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0016322 GO:GO:0007298 GO:GO:0048813
GO:GO:0007517 EMBL:AL031765 GO:GO:0007281 GO:GO:0046982
GO:GO:0040034 GO:GO:0005700 GO:GO:0035072 PDB:1R0O PDB:2HAN
PDBsum:1R0O PDBsum:2HAN GO:GO:0004884 GO:GO:0045596
GeneTree:ENSGT00690000101777 EMBL:X53417 EMBL:X52591 EMBL:AY069393
EMBL:X53379 PIR:A35872 PIR:T13737 RefSeq:NP_476781.1 UniGene:Dm.25
PDB:1HG4 PDBsum:1HG4 ProteinModelPortal:P20153 SMR:P20153
DIP:DIP-645N IntAct:P20153 MINT:MINT-824030 STRING:P20153
PaxDb:P20153 PRIDE:P20153 EnsemblMetazoa:FBtr0070346
EnsemblMetazoa:FBtr0333803 GeneID:31165 KEGG:dme:Dmel_CG4380
CTD:31165 FlyBase:FBgn0003964 InParanoid:P20153 KO:K14030
OMA:MGDSRDS OrthoDB:EOG45HQD3 PhylomeDB:P20153
EvolutionaryTrace:P20153 GenomeRNAi:31165 NextBio:772247
Bgee:P20153 GermOnline:CG4380 GO:GO:0008230 GO:GO:0005500
Uniprot:P20153
Length = 508
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR+SGKHYG+YSC+GC GFFKR++ ++ Y C+ + C IDK RN+C+ C
Sbjct: 104 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRN----CIIDKRQRNRCQYC 159
Query: 78 RLNKCFMSAMNKD 90
R KC M ++
Sbjct: 160 RYQKCLTCGMKRE 172
>UNIPROTKB|F1MWQ3 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI CTD:5914
GO:GO:0060010 EMBL:DAAA02049130 EMBL:DAAA02049137 EMBL:DAAA02049131
EMBL:DAAA02049132 EMBL:DAAA02049133 EMBL:DAAA02049134
EMBL:DAAA02049135 EMBL:DAAA02049136 IPI:IPI00709635
RefSeq:NP_001014942.2 UniGene:Bt.8306 Ensembl:ENSBTAT00000016586
GeneID:534280 KEGG:bta:534280 NextBio:20876336 Uniprot:F1MWQ3
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|F1PN49 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AAEX03006463 EMBL:AAEX03006464
EMBL:AAEX03006465 ProteinModelPortal:F1PN49
Ensembl:ENSCAFT00000011311 Uniprot:F1PN49
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|Q5FBR4 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448
HOGENOM:HOG000010312 KO:K08527 EMBL:AB179779 RefSeq:NP_001012663.1
UniGene:Cfa.45823 ProteinModelPortal:Q5FBR4 SMR:Q5FBR4
STRING:Q5FBR4 GeneID:480526 KEGG:cfa:480526 CTD:5914
NextBio:20855534 Uniprot:Q5FBR4
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|P10276 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0007281 "germ cell development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0055012 "ventricular cardiac
muscle cell differentiation" evidence=IEA] [GO:0060010 "Sertoli
cell fate commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051099 "positive regulation of binding" evidence=IMP]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045787 "positive regulation of
cell cycle" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0071300 "cellular
response to retinoic acid" evidence=IDA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0043277 "apoptotic cell clearance"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0051018
"protein kinase A binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0001972 "retinoic acid binding" evidence=IDA]
[GO:0003708 "retinoic acid receptor activity" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0030520
"intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IDA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IDA] [GO:0032736 "positive regulation
of interleukin-13 production" evidence=IDA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IDA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IDA]
[GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IDA] [GO:0009986 "cell surface"
evidence=IC] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0009986 GO:GO:0032689
GO:GO:0032355 GO:GO:0046872 GO:GO:0045947 GO:GO:0008284
GO:GO:0043025 GO:GO:0030425 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005102 GO:GO:0006468
GO:GO:0007283 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0071222
GO:GO:0000122 GO:GO:0000790 GO:GO:0003713 GO:GO:0032720
GO:GO:0007281 GO:GO:0046982 GO:GO:0035264 GO:GO:0030853
GO:GO:0051018 Pathway_Interaction_DB:retinoic_acid_pathway
DrugBank:DB00459 GO:GO:0006367 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0001972 GO:GO:0060591 GO:GO:0003708
GO:GO:0032736 GO:GO:0032754 GO:GO:0061037 GO:GO:0055012
GO:GO:0044323 PDB:3KMR PDB:4DQM PDBsum:3KMR PDBsum:4DQM PDB:3A9E
PDBsum:3A9E PDB:3KMZ PDBsum:3KMZ EMBL:U41742 EMBL:U41743
Orphanet:520 EMBL:AB067754 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 HOGENOM:HOG000010312 KO:K08527 OMA:RTENVCI
CTD:5914 EMBL:X06614 EMBL:X06538 EMBL:AF088895 EMBL:AF088889
EMBL:AF088890 EMBL:AF088891 EMBL:AF088892 EMBL:AF088893
EMBL:AF088894 EMBL:FJ487576 EMBL:AC080112 EMBL:BC008727
EMBL:BC071733 EMBL:X56058 EMBL:X58685 EMBL:AF283809 IPI:IPI00020071
IPI:IPI00218375 IPI:IPI00922641 PIR:A29491 RefSeq:NP_000955.1
RefSeq:NP_001019980.1 RefSeq:NP_001138773.1 RefSeq:NP_001138774.1
UniGene:Hs.654583 PDB:1DKF PDB:1DSZ PDBsum:1DKF PDBsum:1DSZ
ProteinModelPortal:P10276 SMR:P10276 DIP:DIP-34N IntAct:P10276
MINT:MINT-123081 STRING:P10276 PhosphoSite:P10276 DMDM:133483
PaxDb:P10276 PRIDE:P10276 DNASU:5914 Ensembl:ENST00000254066
Ensembl:ENST00000394081 Ensembl:ENST00000394089
Ensembl:ENST00000425707 GeneID:5914 KEGG:hsa:5914 UCSC:uc002huk.2
GeneCards:GC17P038465 HGNC:HGNC:9864 MIM:180240 MIM:612376
neXtProt:NX_P10276 PharmGKB:PA34225 PhylomeDB:P10276
BindingDB:P10276 ChEMBL:CHEMBL2055 ChiTaRS:RARA DrugBank:DB00210
DrugBank:DB00982 DrugBank:DB04942 DrugBank:DB00799
EvolutionaryTrace:P10276 GenomeRNAi:5914 NextBio:23018
ArrayExpress:P10276 Bgee:P10276 CleanEx:HS_RARA
Genevestigator:P10276 GermOnline:ENSG00000131759 GO:GO:0060010
Uniprot:P10276
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|F1RXC9 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI GO:GO:0060010
EMBL:CU928542 RefSeq:XP_003131522.1 RefSeq:XP_003358102.1
UniGene:Ssc.15829 Ensembl:ENSSSCT00000019026 GeneID:396709
KEGG:ssc:396709 ArrayExpress:F1RXC9 Uniprot:F1RXC9
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|G3V956 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH473948 GO:GO:0003708
OMA:RTENVCI UniGene:Rn.91057 Ensembl:ENSRNOT00000036872
Uniprot:G3V956
Length = 462
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFEVGMSKESVR 159
>UNIPROTKB|A8MUP8 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 EMBL:CH471152 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 HOGENOM:HOG000010312 EMBL:AC080112
UniGene:Hs.654583 HGNC:HGNC:9864 ChiTaRS:RARA IPI:IPI00014923
SMR:A8MUP8 STRING:A8MUP8 Ensembl:ENST00000394086 Uniprot:A8MUP8
Length = 478
Score = 222 (83.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 103 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 158
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 159 CRLQKCFEVGMSKESVR 175
>MGI|MGI:97857 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0021756 "striatum development" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IGI] [GO:0035264 "multicellular organism
growth" evidence=IGI] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0048048 "embryonic eye morphogenesis"
evidence=IGI] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048566 "embryonic digestive tract
development" evidence=ISO] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:97857 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0003708 GO:GO:0061037 PDB:1XDK PDBsum:1XDK
GO:GO:0055012 eggNOG:NOG297448 HOGENOM:HOG000010312
OrthoDB:EOG4F7NK7 CTD:5915 KO:K08528 OMA:QEVFVCI EMBL:X56574
EMBL:X56569 EMBL:X56573 EMBL:S56660 EMBL:S92180 IPI:IPI00130386
IPI:IPI00230346 IPI:IPI00230347 IPI:IPI00230348 PIR:S05051
RefSeq:NP_035373.1 UniGene:Mm.259318 ProteinModelPortal:P22605
SMR:P22605 IntAct:P22605 STRING:P22605 PRIDE:P22605
Ensembl:ENSMUST00000063750 GeneID:218772 KEGG:mmu:218772
UCSC:uc007xvc.1 InParanoid:P22605 BindingDB:P22605
ChEMBL:CHEMBL3266 EvolutionaryTrace:P22605 NextBio:376409
Bgee:P22605 CleanEx:MM_RARB Genevestigator:P22605
GermOnline:ENSMUSG00000017491 Uniprot:P22605
Length = 482
Score = 222 (83.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N +YTC + C I+K RN+C+
Sbjct: 114 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKN----CVINKVTRNRCQY 169
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 170 CRLQKCFEVGMSKESVR 186
>UNIPROTKB|E2R2V0 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0061037 "negative regulation
of cartilage development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 OMA:RTENVCI GO:GO:0060010
EMBL:AAEX03006463 EMBL:AAEX03006464 EMBL:AAEX03006465
Ensembl:ENSCAFT00000035664 Uniprot:E2R2V0
Length = 486
Score = 222 (83.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 111 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 166
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 167 CRLQKCFEVGMSKESVR 183
>MGI|MGI:97856 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0001657 "ureteric
bud development" evidence=IMP] [GO:0001972 "retinoic acid binding"
evidence=ISO] [GO:0003417 "growth plate cartilage development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IGI] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0010629
"negative regulation of gene expression" evidence=IGI] [GO:0017148
"negative regulation of translation" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0030852 "regulation of
granulocyte differentiation" evidence=IMP] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO]
[GO:0031490 "chromatin DNA binding" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032526 "response to retinoic
acid" evidence=ISO;IMP] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032736 "positive regulation of interleukin-13 production"
evidence=ISO] [GO:0032753 "positive regulation of interleukin-4
production" evidence=ISO] [GO:0032754 "positive regulation of
interleukin-5 production" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IGI;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IMP]
[GO:0044323 "retinoic acid-responsive element binding"
evidence=ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISO] [GO:0045787 "positive
regulation of cell cycle" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0045947
"negative regulation of translational initiation" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] [GO:0048167 "regulation of synaptic
plasticity" evidence=ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051018 "protein kinase A
binding" evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] [GO:0060010 "Sertoli cell fate
commitment" evidence=IMP] [GO:0060591 "chondroblast
differentiation" evidence=IMP] [GO:0061037 "negative regulation of
cartilage development" evidence=IMP] [GO:0071222 "cellular response
to lipopolysaccharide" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97856
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0032689 GO:GO:0032355 GO:GO:0046872 GO:GO:0045947
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944 GO:GO:0006468
GO:GO:0007283 GO:GO:0071222 GO:GO:0000122 GO:GO:0044212
GO:GO:0000790 GO:GO:0003713 GO:GO:0032526 GO:GO:0032720
GO:GO:0007281 GO:GO:0035264 GO:GO:0030853 GO:GO:0010628
GO:GO:0051099 GO:GO:0031490 GO:GO:0001657 GO:GO:0030520
GO:GO:0045787 GO:GO:0071391 GO:GO:0043277 GO:GO:0032753
GO:GO:0045630 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0001972
GO:GO:0060591 GO:GO:0003708 GO:GO:0045596 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7 CTD:5914 GO:GO:0060010
EMBL:X56572 EMBL:X56565 EMBL:S56656 EMBL:X57528 EMBL:M60909
EMBL:BC010216 IPI:IPI00114447 IPI:IPI00223075 PIR:S05050
RefSeq:NP_001169999.1 RefSeq:NP_001170773.1 RefSeq:NP_001170774.1
RefSeq:NP_033050.2 UniGene:Mm.439744 ProteinModelPortal:P11416
SMR:P11416 DIP:DIP-31480N IntAct:P11416 MINT:MINT-5210296
STRING:P11416 PhosphoSite:P11416 PRIDE:P11416
Ensembl:ENSMUST00000068133 Ensembl:ENSMUST00000107473
Ensembl:ENSMUST00000107474 Ensembl:ENSMUST00000107475
Ensembl:ENSMUST00000164748 GeneID:19401 KEGG:mmu:19401
UCSC:uc007lhz.2 InParanoid:P11416 BindingDB:P11416
ChEMBL:CHEMBL2792 NextBio:296513 Bgee:P11416 CleanEx:MM_RARA
Genevestigator:P11416 GermOnline:ENSMUSG00000037992 GO:GO:0030852
Uniprot:P11416
Length = 462
Score = 221 (82.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKN----CIINKVTRNRCQY 142
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KCF M+K+ +
Sbjct: 143 CRLQKCFDVGMSKESVR 159
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 172
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 173 RLKKCLEMGMKME 185
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 172
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 173 RLKKCLEMGMKME 185
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQD----CIINKHHRNRCQFC 172
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 173 RLKKCLEMGMKME 185
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQD----CIINKHHRNRCQFC 172
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 173 RLKKCLEMGMKME 185
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQD----CIINKHHRNRCQFC 172
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 173 RLKKCLEMGMKME 185
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 121 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 176
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 177 RLKKCLEMGMKME 189
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 223 (83.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 132 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQD----CIINKHHRNRCQFC 187
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 188 RLKKCLEMGMKME 200
>ZFIN|ZDB-GENE-040426-855 [details] [associations]
symbol:rorab "RAR-related orphan receptor A,
paralog b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-855 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG324222 GeneTree:ENSGT00700000104109
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:BX927082 EMBL:BC159203
IPI:IPI00619432 UniGene:Dr.107956 SMR:B0JZJ5
Ensembl:ENSDART00000099477 Uniprot:B0JZJ5
Length = 492
Score = 221 (82.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCK+CGD+SSG HYG+ +C+GC GFF+RS Y+C Q C ID+T RN+C+
Sbjct: 15 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKS----CLIDRTSRNRCQ 70
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 71 HCRLQKCLAVGMSRDAVK 88
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 223 (83.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRS+ +N Y+C++ D C I+K HRN+C+ C
Sbjct: 150 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFC 205
Query: 78 RLNKCFMSAMNKD 90
RL KC M +
Sbjct: 206 RLKKCLEMGMKME 218
>FB|FBgn0015239 [details] [associations]
symbol:Hr78 "Hormone-receptor-like in 78" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=NAS;TAS]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0007424 "open tracheal system development" evidence=IMP]
[GO:0035002 "liquid clearance, open tracheal system" evidence=IMP]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0046872 GO:GO:0004879 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0035071 GO:GO:0000977 GO:GO:0035002 EMBL:U36791 EMBL:U31517
EMBL:AY058317 RefSeq:NP_001189151.1 RefSeq:NP_001189152.1
RefSeq:NP_524203.2 RefSeq:NP_730636.1 RefSeq:NP_730637.1
RefSeq:NP_996137.1 UniGene:Dm.6935 ProteinModelPortal:Q24142
SMR:Q24142 MINT:MINT-1578940 STRING:Q24142
EnsemblMetazoa:FBtr0078389 EnsemblMetazoa:FBtr0078390
EnsemblMetazoa:FBtr0078392 EnsemblMetazoa:FBtr0303653
EnsemblMetazoa:FBtr0303654 GeneID:40378 KEGG:dme:Dmel_CG7199
CTD:40378 FlyBase:FBgn0015239 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 InParanoid:Q24142 KO:K14031
OMA:GAMNCEV OrthoDB:EOG4G1JZH PhylomeDB:Q24142 GenomeRNAi:40378
NextBio:818471 Bgee:Q24142 GermOnline:CG7199 Uniprot:Q24142
Length = 601
Score = 221 (82.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 39/73 (53%), Positives = 49/73 (67%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGDR+SG+HYG SC+GC GFFKRSI + Y C+ G + +C + K HRN+C+ C
Sbjct: 52 CLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCR--GAM--NCEVTKHHRNRCQFC 107
Query: 78 RLNKCFMSAMNKD 90
RL KC S M D
Sbjct: 108 RLQKCLASGMRSD 120
>ZFIN|ZDB-GENE-980526-284 [details] [associations]
symbol:raraa "retinoic acid receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;IDA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0021575 "hindbrain
morphogenesis" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-284 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526
GO:GO:0021575 HOVERGEN:HBG005606 GO:GO:0003708 EMBL:S74155
EMBL:L03398 EMBL:BC092692 IPI:IPI00505878 PIR:I51256
RefSeq:NP_571481.2 UniGene:Dr.193 HSSP:P10276
ProteinModelPortal:Q90271 SMR:Q90271 STRING:Q90271
Ensembl:ENSDART00000079336 GeneID:30680 KEGG:dre:30680 CTD:30680
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
InParanoid:Q90271 KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7
NextBio:20807033 ArrayExpress:Q90271 Bgee:Q90271 Uniprot:Q90271
Length = 444
Score = 218 (81.8 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + + C I+K RN+C+
Sbjct: 74 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKN----CIINKVTRNRCQY 129
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KC M+K+ +
Sbjct: 130 CRLQKCLEVGMSKESVR 146
>WB|WBGene00003620 [details] [associations]
symbol:nhr-21 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104802
EMBL:FO081192 UniGene:Cel.14682 GeneID:174202
KEGG:cel:CELE_F21D12.1 CTD:174202 RefSeq:NP_001040766.1
ProteinModelPortal:H2KZU4 SMR:H2KZU4 EnsemblMetazoa:F21D12.1e.1
EnsemblMetazoa:F21D12.1e.2 WormBase:F21D12.1e OMA:CGVAKEQ
Uniprot:H2KZU4
Length = 450
Score = 218 (81.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 37/71 (52%), Positives = 47/71 (66%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD + GKHYG+ +C+GC GFF+RSI +NR Y C+ QG C + K RN CR+C
Sbjct: 30 CAVCGDTALGKHYGVTACNGCKGFFRRSIWKNRTYACRYQGK----CGVAKEQRNACRSC 85
Query: 78 RLNKCFMSAMN 88
RL +C MN
Sbjct: 86 RLKECIKVGMN 96
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 221 (82.9 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 4 GTDNSLGDRLLDIP-CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKG 62
GTD S R+ I C VCGD++SG+HYG SC+GC GFFKRS+ ++ Y+C++ D
Sbjct: 135 GTDLS---RVQPIEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYSCRSNQD--- 188
Query: 63 HCPIDKTHRNQCRACRLNKCFMSAMNKD 90
C I+K HRN+C+ CRL KC M +
Sbjct: 189 -CVINKHHRNRCQFCRLRKCLEMGMKME 215
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 217 (81.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 17 PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRA 76
PC VC D+SSG HYG+ +C+GC GFF+RSI +N VYTC + C I+K RN+C+
Sbjct: 84 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKS----CIINKVTRNRCQY 139
Query: 77 CRLNKCFMSAMNKDDFK 93
CRL KC M+K+ +
Sbjct: 140 CRLQKCLEVGMSKESVR 156
>WB|WBGene00003654 [details] [associations]
symbol:nhr-64 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0040010
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0019915 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:AY204172
EMBL:AY204173 EMBL:AY204174 EMBL:FO080867 PIR:T32890
RefSeq:NP_001021042.2 RefSeq:NP_001021043.2 UniGene:Cel.18405
ProteinModelPortal:O44960 SMR:O44960 DIP:DIP-26511N IntAct:O44960
MINT:MINT-1104696 STRING:O44960 PaxDb:O44960 PRIDE:O44960
EnsemblMetazoa:C45E1.1a GeneID:171884 KEGG:cel:CELE_C45E1.1
UCSC:C45E1.1b CTD:171884 WormBase:C45E1.1a WormBase:C45E1.1b
InParanoid:O44960 KO:K07295 OMA:EIEYIAL NextBio:873097
ArrayExpress:O44960 Uniprot:O44960
Length = 369
Score = 213 (80.0 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +CGDR++GKHYG SCDGC GFF+R+I + Y C+ G+ C +DK RN CR C
Sbjct: 27 CAICGDRATGKHYGAMSCDGCKGFFRRTIRKRHSYVCRF-GE---KCQVDKAKRNSCRKC 82
Query: 78 RLNKCFMSAMNKD 90
R + C M +D
Sbjct: 83 RFDVCLRKGMRRD 95
>UNIPROTKB|C9JDI9 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AL354928 HOGENOM:HOG000113847
EMBL:AL158075 EMBL:AL354979 IPI:IPI00413606 HGNC:HGNC:7985
ChiTaRS:NR6A1 EMBL:AL669818 ProteinModelPortal:C9JDI9 SMR:C9JDI9
STRING:C9JDI9 PRIDE:C9JDI9 Ensembl:ENST00000475178
ArrayExpress:C9JDI9 Bgee:C9JDI9 Uniprot:C9JDI9
Length = 233
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 11 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 66
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 67 RNRCQYCRLLKCLQMGMNR 85
>UNIPROTKB|I3LTD1 [details] [associations]
symbol:I3LTD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00670000097927 EMBL:CU468031
EMBL:CU618320 EMBL:CU633370 Ensembl:ENSSSCT00000029437
Uniprot:I3LTD1
Length = 134
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 53 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 108
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 109 RNRCQYCRLLKCLQMGMNR 127
>ZFIN|ZDB-GENE-040724-202 [details] [associations]
symbol:nr6a1b "nuclear receptor subfamily 6, group
A, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-202 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0016477 GO:GO:0022008 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
HSSP:P03372 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 OrthoDB:EOG4SJ5DP EMBL:AL772368 EMBL:BC097237
EMBL:DQ017610 IPI:IPI00495851 RefSeq:NP_001028892.1
UniGene:Dr.86752 ProteinModelPortal:Q4V8R7 SMR:Q4V8R7 GeneID:497167
KEGG:dre:497167 CTD:497167 NextBio:20865875 Uniprot:Q4V8R7
Length = 455
Score = 214 (80.4 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 6 DNSLGDRLLDIP---CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKG 62
+NSL D D C +CGDR+SG HYGI SC+GC GFFKRSI R+Y C +
Sbjct: 26 ENSLQDETDDGGERWCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKN--- 82
Query: 63 HCPIDKTHRNQCRACRLNKCFMSAMNK 89
C + + RN+C+ CRL KC MN+
Sbjct: 83 -CQMSRKQRNRCQYCRLQKCLQMGMNR 108
>ZFIN|ZDB-GENE-991207-19 [details] [associations]
symbol:nr6a1a "nuclear receptor subfamily 6, group
A, member 1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048513 "organ development"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0016477
"cell migration" evidence=ISS] [GO:0022008 "neurogenesis"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-991207-19 GO:GO:0005634
GO:GO:0005737 GO:GO:0042803 GO:GO:0016477 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0030917 EMBL:AJ007703 IPI:IPI00507829
RefSeq:NP_571331.2 UniGene:Dr.8104 HSSP:P03372
ProteinModelPortal:Q9PU65 SMR:Q9PU65 STRING:Q9PU65 GeneID:30506
KEGG:dre:30506 CTD:30506 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP NextBio:20806895
ArrayExpress:Q9PU65 Uniprot:Q9PU65
Length = 477
Score = 214 (80.4 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 6 DNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
+N + D+ C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C
Sbjct: 31 ENGIHDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CE 86
Query: 66 IDKTHRNQCRACRLNKCFMSAMNK 89
+ + RN+C+ CRL KC MN+
Sbjct: 87 MSRKQRNRCQYCRLLKCLQMGMNR 110
>UNIPROTKB|Q15406 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0007276 "gamete generation" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0042803 GO:GO:0046872
GO:GO:0008283 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0007283 GO:GO:0005667 GO:GO:0000122 GO:GO:0006367
EMBL:AL354928 eggNOG:NOG253308 HOVERGEN:HBG052664 KO:K08561
OrthoDB:EOG4SJ5DP EMBL:S83309 EMBL:U80802 EMBL:U64876 EMBL:AF004291
EMBL:X99975 EMBL:AL158075 EMBL:AL354979 EMBL:BC030600
IPI:IPI00017258 IPI:IPI00220041 IPI:IPI00413606 IPI:IPI00743885
IPI:IPI00848326 RefSeq:NP_001480.3 RefSeq:NP_201591.2
UniGene:Hs.586460 ProteinModelPortal:Q15406 SMR:Q15406
IntAct:Q15406 MINT:MINT-1404458 STRING:Q15406 PhosphoSite:Q15406
DMDM:12643728 PRIDE:Q15406 DNASU:2649 Ensembl:ENST00000344523
Ensembl:ENST00000373584 Ensembl:ENST00000416460
Ensembl:ENST00000487099 GeneID:2649 KEGG:hsa:2649 UCSC:uc004boq.1
UCSC:uc004bor.1 CTD:2649 GeneCards:GC09M127279 HGNC:HGNC:7985
MIM:602778 neXtProt:NX_Q15406 PharmGKB:PA31766 InParanoid:Q15406
OMA:HSCKTSV ChEMBL:CHEMBL1961793 ChiTaRS:NR6A1 GenomeRNAi:2649
NextBio:10454 ArrayExpress:Q15406 Bgee:Q15406 CleanEx:HS_NR6A1
Genevestigator:Q15406 GermOnline:ENSG00000148200 Uniprot:Q15406
Length = 480
Score = 214 (80.4 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 1 MNVGTDNSLGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
++ GT + DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C +
Sbjct: 43 LDPGTISVSDDRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN- 101
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNK 89
C + + RN+C+ CRL KC MN+
Sbjct: 102 ---CVMSRKQRNRCQYCRLLKCLQMGMNR 127
>UNIPROTKB|Q26622 [details] [associations]
symbol:SHR2 "Orphan steroid hormone receptor 2"
species:7668 "Strongylocentrotus purpuratus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0048471 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045177
GO:GO:0030522 GO:GO:0005652 eggNOG:NOG297520 KO:K14031 EMBL:U38281
EMBL:U38528 EMBL:U38529 RefSeq:NP_001116968.1 UniGene:Spu.209
ProteinModelPortal:Q26622 SMR:Q26622 GeneID:373398 KEGG:spu:373398
CTD:373398 Uniprot:Q26622
Length = 583
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/73 (52%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG+HYG SC+GC GFFKRSI ++ YTC+ D C I K +RN+C+ C
Sbjct: 87 CAVCGDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKD----CQIIKHNRNRCQYC 142
Query: 78 RLNKCFMSAMNKD 90
RL KC M D
Sbjct: 143 RLQKCLDMGMKSD 155
>WB|WBGene00003613 [details] [associations]
symbol:nhr-14 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008340 "determination
of adult lifespan" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG241134 GeneTree:ENSGT00690000101777 EMBL:FO081164
EMBL:AF083229 PIR:T43353 RefSeq:NP_741860.2 RefSeq:NP_741861.2
ProteinModelPortal:O02151 SMR:O02151 MINT:MINT-1085288
STRING:O02151 PaxDb:O02151 PRIDE:O02151 EnsemblMetazoa:T01B10.4a.1
EnsemblMetazoa:T01B10.4a.2 GeneID:181102 KEGG:cel:CELE_T01B10.4
UCSC:T01B10.4b CTD:181102 WormBase:T01B10.4a WormBase:T01B10.4b
HOGENOM:HOG000022323 InParanoid:O02151 OMA:FAYMSNT NextBio:912414
Uniprot:O02151
Length = 435
Score = 212 (79.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++ GKHYG +C+GC GFF+RS+ +N YTC+ C IDK HRN CR C
Sbjct: 20 CVVCGDKAIGKHYGAVACNGCKGFFRRSVWQNLQYTCR----FNKQCNIDKDHRNACRYC 75
Query: 78 RLNKCFMSAMNKD 90
R KC M +
Sbjct: 76 RFQKCLADGMKPE 88
>FB|FBgn0000448 [details] [associations]
symbol:Hr46 "Hormone receptor-like in 46" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007552 "metamorphosis" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004887
"thyroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016319 "mushroom body development"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 EMBL:AE013599 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0007552 GO:GO:0016319 GO:GO:0040034
GO:GO:0000977 GO:GO:0004887 eggNOG:NOG324222 EMBL:M90806 PIR:A46146
RefSeq:NP_001246236.1 RefSeq:NP_788303.1 UniGene:Dm.5036
ProteinModelPortal:P31396 SMR:P31396 IntAct:P31396 STRING:P31396
PRIDE:P31396 EnsemblMetazoa:FBtr0088368 EnsemblMetazoa:FBtr0306345
GeneID:36073 KEGG:dme:Dmel_CG33183 CTD:36073 FlyBase:FBgn0000448
GeneTree:ENSGT00700000104109 InParanoid:P31396 KO:K14033
OrthoDB:EOG4HT77R GenomeRNAi:36073 NextBio:796700 Bgee:P31396
GermOnline:CG33183 Uniprot:P31396
Length = 487
Score = 213 (80.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 4 GTDNSLGD---RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDL 60
G +NS G ++ IPCKVCGD+SSG HYG+ +C+GC GFF+RS Y C
Sbjct: 34 GQNNSSGSIKAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQ- 92
Query: 61 KGHCPIDKTHRNQCRACRLNKCFMSAMNKDDFK 93
C +D+ +RN+C+ CRL KC M++D K
Sbjct: 93 ---CVVDRVNRNRCQYCRLQKCLKLGMSRDAVK 122
>WB|WBGene00003651 [details] [associations]
symbol:nhr-61 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
InterPro:IPR002999 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0040018 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104802 EMBL:Z83128 PIR:T26056 PIR:T26057
RefSeq:NP_001022381.1 RefSeq:NP_001022382.1
ProteinModelPortal:O62389 SMR:O62389 DIP:DIP-24810N IntAct:O62389
MINT:MINT-1120796 EnsemblMetazoa:W01D2.2a.1
EnsemblMetazoa:W01D2.2a.2 EnsemblMetazoa:W01D2.2a.3 GeneID:175142
KEGG:cel:CELE_W01D2.2 UCSC:W01D2.2a CTD:175142 WormBase:W01D2.2a
WormBase:W01D2.2b eggNOG:NOG311908 InParanoid:O62389 OMA:IMELVHL
NextBio:886944 ArrayExpress:O62389 Uniprot:O62389
Length = 412
Score = 211 (79.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 37/73 (50%), Positives = 48/73 (65%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+ C VCGD + GKHYG+ +C+GC GFF+RSI +NR Y C+ G G C + K RN CR
Sbjct: 28 LQCAVCGDVALGKHYGVNACNGCKGFFRRSIWKNRTYACR-HG---GKCLVAKEQRNACR 83
Query: 76 ACRLNKCFMSAMN 88
+CRL +C MN
Sbjct: 84 SCRLTRCLDVGMN 96
>WB|WBGene00003622 [details] [associations]
symbol:nhr-23 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0003700 GO:GO:0006351
GO:GO:0043652 KO:K08701 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 EMBL:U13075 EMBL:U51231 EMBL:U51136
EMBL:AF332203 EMBL:AF332202 EMBL:Z71258 PIR:T18848
RefSeq:NP_001020975.1 RefSeq:NP_001020976.1 RefSeq:NP_001020977.1
RefSeq:NP_001032969.1 RefSeq:NP_001032970.1 RefSeq:NP_001032971.1
UniGene:Cel.19389 ProteinModelPortal:P41828 SMR:P41828
IntAct:P41828 STRING:P41828 EnsemblMetazoa:C01H6.5a GeneID:172460
KEGG:cel:CELE_C01H6.5 UCSC:C01H6.5c CTD:172460 WormBase:C01H6.5a
WormBase:C01H6.5b WormBase:C01H6.5c WormBase:C01H6.5d
WormBase:C01H6.5e WormBase:C01H6.5f InParanoid:P41828 OMA:FAAMYYN
NextBio:875597 Uniprot:P41828
Length = 588
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
IPCKVCGD+SSG HYG+ +C+GC GFF+RS Y C Q + C +D+ +RN+C+
Sbjct: 161 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNYQCPRQKN----CVVDRVNRNRCQ 216
Query: 76 ACRLNKCFMSAMNKDDFK 93
CRL KC M++D K
Sbjct: 217 YCRLKKCIELGMSRDAVK 234
>UNIPROTKB|F1NVM8 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007276 "gamete
generation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AADN02026331
EMBL:AADN02026332 IPI:IPI00598740 Ensembl:ENSGALT00000001607
Uniprot:F1NVM8
Length = 435
Score = 211 (79.3 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 40/84 (47%), Positives = 52/84 (61%)
Query: 7 NSLGDRLLDI-PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCP 65
+SL D +D C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C
Sbjct: 2 SSLADDRVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CV 57
Query: 66 IDKTHRNQCRACRLNKCFMSAMNK 89
+ + RN+C+ CRL KC MN+
Sbjct: 58 MSRKQRNRCQYCRLLKCLQMGMNR 81
>WB|WBGene00003659 [details] [associations]
symbol:nhr-69 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 208 (78.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +C D+S+GKHYG SCDGC GFF+RSI + Y C+ + +C + K RN CRAC
Sbjct: 6 CHICNDKSTGKHYGAISCDGCKGFFRRSIRKRYHYQCR----FEQNCDVTKNKRNACRAC 61
Query: 78 RLNKCFMSAMNKD 90
RL KC + M +
Sbjct: 62 RLQKCVKAGMKSN 74
>UNIPROTKB|P91829 [details] [associations]
symbol:nhr-69 "Nuclear hormone receptor family member
nhr-69" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 208 (78.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C +C D+S+GKHYG SCDGC GFF+RSI + Y C+ + +C + K RN CRAC
Sbjct: 6 CHICNDKSTGKHYGAISCDGCKGFFRRSIRKRYHYQCR----FEQNCDVTKNKRNACRAC 61
Query: 78 RLNKCFMSAMNKD 90
RL KC + M +
Sbjct: 62 RLQKCVKAGMKSN 74
>UNIPROTKB|P70033 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8355 "Xenopus laevis" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0030917 "midbrain-hindbrain
boundary development" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0048513 "organ
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917 HOVERGEN:HBG052664
KO:K08561 HSSP:P19793 CTD:2649 EMBL:U58683 EMBL:AY130967
RefSeq:NP_001084102.1 UniGene:Xl.37734 ProteinModelPortal:P70033
SMR:P70033 GeneID:399304 KEGG:xla:399304 Xenbase:XB-GENE-487596
Uniprot:P70033
Length = 435
Score = 210 (79.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR+ C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 7 DRVDQRACLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 62
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 63 RNRCQYCRLLKCLQMGMNR 81
>UNIPROTKB|Q66JK1 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
GeneTree:ENSGT00670000097927 HSSP:P03372 eggNOG:NOG253308
HOGENOM:HOG000113847 HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP
CTD:2649 OMA:HSCKTSV EMBL:AL630347 EMBL:CR760283 EMBL:BC080883
RefSeq:NP_001008005.1 UniGene:Str.11424 ProteinModelPortal:Q66JK1
SMR:Q66JK1 STRING:Q66JK1 Ensembl:ENSXETT00000018759 GeneID:493367
KEGG:xtr:493367 Xenbase:XB-GENE-487592 InParanoid:Q66JK1
Bgee:Q66JK1 Uniprot:Q66JK1
Length = 435
Score = 210 (79.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR+ C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 7 DRVDQRACLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 62
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 63 RNRCQYCRLLKCLQMGMNR 81
>FB|FBgn0004865 [details] [associations]
symbol:Eip78C "Ecdysone-induced protein 78C" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0002165 "instar larval or
pupal development" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014296 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 KO:K08701 eggNOG:NOG324222
EMBL:U01087 EMBL:U01088 EMBL:X98881 EMBL:X98882 EMBL:AF238308
EMBL:AF238309 EMBL:X73045 PIR:A49070 PIR:B49070 PIR:S43435
RefSeq:NP_001246862.1 RefSeq:NP_001246863.1 RefSeq:NP_524195.2
RefSeq:NP_730609.3 ProteinModelPortal:P45447 SMR:P45447
STRING:P45447 GeneID:40345 KEGG:dme:Dmel_CG18023 CTD:40345
FlyBase:FBgn0004865 InParanoid:P45447 OrthoDB:EOG4GMSC7
GenomeRNAi:40345 NextBio:818285 Bgee:P45447 GermOnline:CG18023
Uniprot:P45447
Length = 866
Score = 215 (80.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 16 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCR 75
+PCKVCGD++SG HYG+ SC+GC GFF+RSI + Y C G C + + +RN+C+
Sbjct: 365 VPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGK----CLVIRLNRNRCQ 420
Query: 76 ACRLNKCFMSAMNKDDFK 93
CR KC + M++D +
Sbjct: 421 YCRFKKCLSAGMSRDSVR 438
>ZFIN|ZDB-GENE-040704-11 [details] [associations]
symbol:nr4a1 "nuclear receptor subfamily 4, group A,
member 1" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040704-11
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AY542372 UniGene:Dr.9243
ProteinModelPortal:I6LBI5 Uniprot:I6LBI5
Length = 580
Score = 212 (79.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD +S +HYG+ +C+GC GFFKR++ +N Y C A D CP+DK RN+C+ C
Sbjct: 239 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKD----CPVDKRRRNRCQFC 294
Query: 78 RLNKCFMSAMNKD 90
R KC M K+
Sbjct: 295 RFQKCLAVGMVKE 307
>UNIPROTKB|F1PHV1 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AAEX03006888
EMBL:AAEX03006889 Ensembl:ENSCAFT00000032203 Uniprot:F1PHV1
Length = 437
Score = 209 (78.6 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 11 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 66
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 67 RNRCQYCRLLKCLQMGMNR 85
>UNIPROTKB|E9PSV7 [details] [associations]
symbol:Nr6a1 "Protein Nr6a1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1564740 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0007276 GeneTree:ENSGT00670000097927
IPI:IPI00464878 Ensembl:ENSRNOT00000018751 Uniprot:E9PSV7
Length = 438
Score = 209 (78.6 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 11 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 66
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 67 RNRCQYCRLLKCLQMGMNR 85
>UNIPROTKB|G3N294 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0007276 "gamete generation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0007276
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:DAAA02032107
Ensembl:ENSBTAT00000065207 Uniprot:G3N294
Length = 448
Score = 209 (78.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 11 DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTH 70
DR C +CGDR++G HYGI SC+GC GFFKRSI RVY C + C + +
Sbjct: 5 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKN----CVMSRKQ 60
Query: 71 RNQCRACRLNKCFMSAMNK 89
RN+C+ CRL KC MN+
Sbjct: 61 RNRCQYCRLLKCLQMGMNR 79
>UNIPROTKB|K9J6P0 [details] [associations]
symbol:K9J6P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003071 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00640000091364 EMBL:AAEX03015017
Ensembl:ENSCAFT00000011743 Uniprot:K9J6P0
Length = 562
Score = 211 (79.3 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD +S +HYG+ +C+GC GFFKR++ +N Y C A D CP+DK RN+C+ C
Sbjct: 231 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKD----CPVDKRRRNRCQFC 286
Query: 78 RLNKCFMSAMNKD 90
R KC M K+
Sbjct: 287 RFQKCLAVGMVKE 299
>UNIPROTKB|C9J2C8 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044255 "cellular lipid
metabolic process" evidence=IEA] [GO:0045861 "negative regulation
of proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0070328 "triglyceride homeostasis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0090188 "negative regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0005737
GO:GO:0008286 GO:GO:0045893 GO:GO:0046872 GO:GO:0050728
GO:GO:0004879 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0044212 GO:GO:0070328 GO:GO:0043031 EMBL:AC018410
InterPro:IPR023257 PRINTS:PR02034 GO:GO:0090188 GO:GO:0090341
HGNC:HGNC:7966 IPI:IPI00877914 ProteinModelPortal:C9J2C8 SMR:C9J2C8
STRING:C9J2C8 Ensembl:ENST00000412937 HOGENOM:HOG000202420
BindingDB:C9J2C8 ArrayExpress:C9J2C8 Bgee:C9J2C8 Uniprot:C9J2C8
Length = 134
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 53 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 108
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 109 RLRKCRQAGMREE 121
>UNIPROTKB|C9J4R0 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044255 "cellular lipid
metabolic process" evidence=IEA] [GO:0045861 "negative regulation
of proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0070328 "triglyceride homeostasis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0090188 "negative regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0005737 GO:GO:0008286 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045861
GO:GO:0044255 GO:GO:0042632 GO:GO:0000122 GO:GO:0044212
GO:GO:0070328 GO:GO:0043031 EMBL:AC018410 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0090188 GO:GO:0090341
HGNC:HGNC:7966 IPI:IPI00791645 ProteinModelPortal:C9J4R0 SMR:C9J4R0
STRING:C9J4R0 Ensembl:ENST00000444396 BindingDB:C9J4R0
ArrayExpress:C9J4R0 Bgee:C9J4R0 Uniprot:C9J4R0
Length = 194
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 153
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 154 RLRKCRQAGMREE 166
>UNIPROTKB|C9JBS2 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044255 "cellular lipid
metabolic process" evidence=IEA] [GO:0045861 "negative regulation
of proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0070328 "triglyceride homeostasis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0090188 "negative regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0005737 GO:GO:0008286 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045861
GO:GO:0044255 GO:GO:0042632 GO:GO:0000122 GO:GO:0044212
GO:GO:0070328 GO:GO:0043031 EMBL:AC018410 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0090188 GO:GO:0090341
HGNC:HGNC:7966 IPI:IPI00879201 ProteinModelPortal:C9JBS2 SMR:C9JBS2
STRING:C9JBS2 Ensembl:ENST00000436029 BindingDB:C9JBS2
ArrayExpress:C9JBS2 Bgee:C9JBS2 Uniprot:C9JBS2
Length = 212
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 153
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 154 RLRKCRQAGMREE 166
>UNIPROTKB|C9JCS0 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044255 "cellular lipid
metabolic process" evidence=IEA] [GO:0045861 "negative regulation
of proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0070328 "triglyceride homeostasis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0090188 "negative regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0005737 GO:GO:0008286 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045861
GO:GO:0044255 GO:GO:0042632 GO:GO:0000122 GO:GO:0044212
GO:GO:0070328 GO:GO:0043031 EMBL:AC018410 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0090188 GO:GO:0090341
HGNC:HGNC:7966 IPI:IPI00878873 ProteinModelPortal:C9JCS0 SMR:C9JCS0
STRING:C9JCS0 PRIDE:C9JCS0 Ensembl:ENST00000449369 BindingDB:C9JCS0
ArrayExpress:C9JCS0 Bgee:C9JCS0 Uniprot:C9JCS0
Length = 205
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 153
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 154 RLRKCRQAGMREE 166
>UNIPROTKB|C9JJ16 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044255 "cellular lipid
metabolic process" evidence=IEA] [GO:0045861 "negative regulation
of proteolysis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0070328 "triglyceride homeostasis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0090188 "negative regulation of pancreatic juice secretion"
evidence=IEA] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0005737 GO:GO:0008286 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0045861
GO:GO:0044255 GO:GO:0042632 GO:GO:0000122 GO:GO:0044212
GO:GO:0070328 GO:GO:0043031 EMBL:AC018410 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0090188 GO:GO:0090341
HGNC:HGNC:7966 IPI:IPI00790577 ProteinModelPortal:C9JJ16 SMR:C9JJ16
STRING:C9JJ16 Ensembl:ENST00000436778 BindingDB:C9JJ16
ArrayExpress:C9JJ16 Bgee:C9JJ16 Uniprot:C9JJ16
Length = 202
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 153
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 154 RLRKCRQAGMREE 166
>UNIPROTKB|E9PID2 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC018410
InterPro:IPR023257 PRINTS:PR02034 HGNC:HGNC:7966 IPI:IPI01011352
ProteinModelPortal:E9PID2 SMR:E9PID2 Ensembl:ENST00000527949
ArrayExpress:E9PID2 Bgee:E9PID2 Uniprot:E9PID2
Length = 296
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD++SG HY + SC+GC GFF+RS+ + Y C + G GHCP+D R +C+ C
Sbjct: 7 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHS-G---GHCPMDTYMRRKCQEC 62
Query: 78 RLNKCFMSAMNKD 90
RL KC + M ++
Sbjct: 63 RLRKCRQAGMREE 75
>UNIPROTKB|Q0V8F0 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 EMBL:BT026269 IPI:IPI00686023
RefSeq:NP_001069379.1 UniGene:Bt.23373 ProteinModelPortal:Q0V8F0
SMR:Q0V8F0 STRING:Q0V8F0 PRIDE:Q0V8F0 Ensembl:ENSBTAT00000000648
GeneID:528390 KEGG:bta:528390 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 InParanoid:Q0V8F0 KO:K04465 OMA:KWAEKIP
OrthoDB:EOG4VMFF7 NextBio:20874811 ArrayExpress:Q0V8F0
Uniprot:Q0V8F0
Length = 598
Score = 211 (79.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD +S +HYG+ +C+GC GFFKR++ +N Y C A D CP+DK RN+C+ C
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKD----CPVDKRRRNRCQFC 322
Query: 78 RLNKCFMSAMNKD 90
R KC M K+
Sbjct: 323 RFQKCLAVGMVKE 335
>UNIPROTKB|P51666 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9615 "Canis lupus familiaris" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:X97226 RefSeq:NP_001003227.1 UniGene:Cfa.1213
ProteinModelPortal:P51666 SMR:P51666 STRING:P51666 GeneID:403897
KEGG:cfa:403897 InParanoid:P51666 NextBio:20817389 Uniprot:P51666
Length = 598
Score = 211 (79.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD +S +HYG+ +C+GC GFFKR++ +N Y C A D CP+DK RN+C+ C
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKD----CPVDKRRRNRCQFC 322
Query: 78 RLNKCFMSAMNKD 90
R KC M K+
Sbjct: 323 RFQKCLAVGMVKE 335
>UNIPROTKB|P22736 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0008543 "fibroblast
growth factor receptor signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0048011 "neurotrophin TRK
receptor signaling pathway" evidence=TAS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0035924 "cellular response to
vascular endothelial growth factor stimulus" evidence=IMP]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IMP] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IMP] [GO:0035767 "endothelial cell
chemotaxis" evidence=IMP] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:nfat_3pathway Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0007173
GO:GO:0008543 GO:GO:0048011 GO:GO:0043154 GO:GO:0005654
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0001938
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:rxr_vdr_pathway EMBL:CH471111 GO:GO:0005667
GO:GO:0001077 EMBL:AC025259 GO:GO:0048015 GO:GO:0006367
GO:GO:0002042 GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:D49728 EMBL:L13740 EMBL:AK297526 EMBL:BC016147 IPI:IPI00743108
IPI:IPI01011914 PIR:A37251 RefSeq:NP_001189162.1 RefSeq:NP_002126.2
RefSeq:NP_775180.1 UniGene:Hs.524430 UniGene:Hs.670088 PDB:2QW4
PDB:3V3E PDB:3V3Q PDBsum:2QW4 PDBsum:3V3E PDBsum:3V3Q
ProteinModelPortal:P22736 SMR:P22736 IntAct:P22736
MINT:MINT-2859679 STRING:P22736 PhosphoSite:P22736 DMDM:127819
PRIDE:P22736 DNASU:3164 Ensembl:ENST00000243050
Ensembl:ENST00000360284 Ensembl:ENST00000394824
Ensembl:ENST00000394825 Ensembl:ENST00000550082 GeneID:3164
KEGG:hsa:3164 UCSC:uc001rzs.3 GeneCards:GC12P052416
H-InvDB:HIX0171621 HGNC:HGNC:7980 MIM:139139 neXtProt:NX_P22736
PharmGKB:PA31761 InParanoid:P22736 PhylomeDB:P22736
BindingDB:P22736 ChEMBL:CHEMBL1293229 ChiTaRS:NR4A1
EvolutionaryTrace:P22736 GenomeRNAi:3164 NextBio:12546
ArrayExpress:P22736 Bgee:P22736 CleanEx:HS_NR4A1
Genevestigator:P22736 GermOnline:ENSG00000123358 Uniprot:P22736
Length = 598
Score = 211 (79.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 18 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRVYTCKAQGDLKGHCPIDKTHRNQCRAC 77
C VCGD +S +HYG+ +C+GC GFFKR++ +N Y C A D CP+DK RN+C+ C
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKD----CPVDKRRRNRCQFC 322
Query: 78 RLNKCFMSAMNKD 90
R KC M K+
Sbjct: 323 RFQKCLAVGMVKE 335
WARNING: HSPs involving 659 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.474 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 93 93 0.00091 102 3 11 22 0.45 29
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 909
No. of states in DFA: 550 (59 KB)
Total size of DFA: 125 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.96u 0.06s 11.02t Elapsed: 00:00:08
Total cpu time: 11.00u 0.06s 11.06t Elapsed: 00:00:09
Start: Thu Aug 15 12:59:38 2013 End: Thu Aug 15 12:59:47 2013
WARNINGS ISSUED: 2