Query psy6601
Match_columns 459
No_of_seqs 273 out of 406
Neff 3.1
Searched_HMMs 29240
Date Fri Aug 16 22:19:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6601.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6601hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xcm_E RAR1, cytosolic heat sh 100.0 7.3E-35 2.5E-39 236.2 4.3 70 79-148 4-73 (74)
2 2yrt_A Chord containing protei 100.0 1.7E-33 5.7E-38 228.8 5.2 66 85-150 10-75 (75)
3 2xcm_E RAR1, cytosolic heat sh 100.0 5.9E-31 2E-35 213.4 3.8 64 380-443 4-67 (74)
4 2yrt_A Chord containing protei 99.9 5.3E-29 1.8E-33 202.4 2.4 58 386-443 10-67 (75)
5 2xcm_C SGT1-like protein, cyto 99.7 5.8E-17 2E-21 128.9 8.1 86 220-308 2-87 (92)
6 1wh0_A Ubiquitin carboxyl-term 99.7 6.5E-17 2.2E-21 141.7 9.1 89 219-309 18-118 (134)
7 1x5m_A Calcyclin-binding prote 99.6 5.8E-16 2E-20 132.5 9.0 87 219-308 19-110 (127)
8 1rl1_A Suppressor of G2 allele 99.6 3E-15 1E-19 124.3 8.2 88 219-309 8-95 (114)
9 2kmw_A Uncharacterized protein 99.5 1.3E-14 4.4E-19 129.0 7.8 83 221-309 5-88 (150)
10 1ejf_A Progesterone receptor P 99.5 2.2E-14 7.6E-19 122.6 8.0 83 222-308 5-88 (125)
11 2cg9_X CO-chaperone protein SB 99.4 4.5E-13 1.6E-17 116.5 5.3 85 221-309 7-106 (134)
12 2o30_A Nuclear movement protei 99.0 1.6E-09 5.6E-14 93.2 8.6 81 221-308 5-86 (131)
13 1wgv_A KIAA1068 protein; CS do 98.9 4.7E-09 1.6E-13 89.4 8.5 85 221-308 20-107 (124)
14 1wfi_A Nuclear distribution ge 98.6 4.7E-08 1.6E-12 83.8 7.4 89 217-311 4-96 (131)
15 2rh0_A NUDC domain-containing 98.5 3E-07 1E-11 82.1 7.9 81 221-308 14-98 (157)
16 3qor_A Nuclear migration prote 98.4 1.4E-06 4.7E-11 74.3 8.8 92 215-312 11-106 (121)
17 4fei_A Heat shock protein-rela 95.6 0.062 2.1E-06 43.8 8.8 85 222-308 8-101 (102)
18 3gla_A Low molecular weight he 95.3 0.048 1.6E-06 43.9 7.2 80 222-303 6-99 (100)
19 4eld_A MJ16.5-P1, small heat s 93.3 0.31 1E-05 42.8 8.3 79 223-303 59-152 (161)
20 3aab_A Putative uncharacterize 93.1 0.34 1.2E-05 40.6 8.0 81 221-303 25-117 (123)
21 1gme_A Heat shock protein 16.9 93.0 0.37 1.3E-05 42.1 8.4 81 220-302 43-138 (151)
22 2wj5_A Heat shock protein beta 91.8 0.67 2.3E-05 37.9 8.0 77 223-301 4-88 (101)
23 2e6i_A Tyrosine-protein kinase 89.0 0.28 9.5E-06 39.0 3.2 32 101-142 8-39 (64)
24 2lul_A Tyrosine-protein kinase 88.7 0.25 8.6E-06 43.1 3.1 31 103-143 125-155 (164)
25 3l1e_A Alpha-crystallin A chai 86.8 1.3 4.4E-05 36.5 6.1 79 223-303 5-91 (106)
26 2ys2_A Cytoplasmic tyrosine-pr 83.9 0.6 2E-05 35.5 2.5 32 101-142 8-39 (50)
27 2e6i_A Tyrosine-protein kinase 81.2 0.67 2.3E-05 36.8 2.0 23 404-430 10-32 (64)
28 3q9p_A Heat shock protein beta 76.8 11 0.00036 29.8 7.7 74 226-301 3-84 (85)
29 2bol_A TSP36, small heat shock 76.2 9.5 0.00033 37.6 8.8 81 221-303 99-190 (314)
30 2klr_A Alpha-crystallin B chai 74.7 4.2 0.00014 36.7 5.5 77 223-301 66-150 (175)
31 2y1y_A Alpha-crystallin B chai 69.7 8 0.00028 30.6 5.5 73 227-301 3-83 (90)
32 2lul_A Tyrosine-protein kinase 65.5 2.6 8.8E-05 36.6 1.9 19 408-430 129-147 (164)
33 1btk_A Bruton'S tyrosine kinas 59.3 5 0.00017 35.2 2.6 30 103-142 136-165 (169)
34 2ys2_A Cytoplasmic tyrosine-pr 57.4 3.2 0.00011 31.5 0.9 20 406-429 12-31 (50)
35 2k8q_A Protein SHQ1; beta-sand 50.3 26 0.00089 31.1 5.7 74 225-304 8-84 (134)
36 1btk_A Bruton'S tyrosine kinas 37.0 11 0.00038 33.0 1.2 19 406-428 138-156 (169)
37 2v3b_B Rubredoxin 2, rubredoxi 36.8 30 0.001 26.2 3.4 45 85-133 4-50 (55)
38 3eud_A Protein SHQ1; CS domain 36.4 1.9E+02 0.0066 25.2 8.9 80 217-302 14-96 (115)
39 1yk4_A Rubredoxin, RD; electro 32.3 42 0.0014 25.2 3.5 45 85-133 3-49 (52)
40 1s24_A Rubredoxin 2; electron 28.6 44 0.0015 27.8 3.4 47 83-133 34-82 (87)
41 2kn9_A Rubredoxin; metalloprot 27.9 46 0.0016 27.3 3.4 48 83-134 26-75 (81)
42 1e8j_A Rubredoxin; iron-sulfur 27.7 43 0.0015 25.1 2.9 45 85-133 4-50 (52)
43 1dx8_A Rubredoxin; electron tr 27.0 49 0.0017 26.2 3.3 47 84-134 7-55 (70)
No 1
>2xcm_E RAR1, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana}
Probab=100.00 E-value=7.3e-35 Score=236.20 Aligned_cols=70 Identities=37% Similarity=0.781 Sum_probs=67.7
Q ss_pred CCCCCCCcccccCcCceeeCCCCccccceecCCCcccccCCcccccCCCcccchhhhccCCCCcccccCC
Q psy6601 79 SSIPLGTKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCTHGQHVW 148 (459)
Q Consensus 79 ~~I~~gt~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt~GkH~~ 148 (459)
..|++|++|+|+||++.|++++|.+++|+||||+||||||||+||||++|++||++||+|+||++|+|+.
T Consensus 4 ~~i~~~~~C~n~GC~~~f~~~~n~~~~C~yHpG~PvFHdg~K~WsCC~k~~~dF~~Fl~i~GCt~G~H~~ 73 (74)
T 2xcm_E 4 IDINQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSS 73 (74)
T ss_dssp CCTTSCEECCSBTTCCEECSTTCCTTCEEEBCCCEEEETTEEEETTTTEECSSHHHHTTCCCCEEECCCC
T ss_pred EccCCCCcEECCCcCCEecCCCCCCCceEecCCCceeCCCCeeeCCCCCcccChhHhccCCCcccccccC
Confidence 4689999999999999999999999999999999999999999999999999999999999999999964
No 2
>2yrt_A Chord containing protein-1; CHP1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.98 E-value=1.7e-33 Score=228.78 Aligned_cols=66 Identities=45% Similarity=0.910 Sum_probs=63.8
Q ss_pred CcccccCcCceeeCCCCccccceecCCCcccccCCcccccCCCcccchhhhccCCCCcccccCCcc
Q psy6601 85 TKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCTHGQHVWFK 150 (459)
Q Consensus 85 t~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt~GkH~~~k 150 (459)
++|+|+||+|.|++++|.+++|+||||+||||||||+||||++|++||++||+|+||++|+|+.++
T Consensus 10 ~~C~n~GC~~~f~~~~n~~~~C~yHpG~PvFHdg~K~WsCC~kk~~dF~~Fl~i~GCt~G~H~~~k 75 (75)
T 2yrt_A 10 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEK 75 (75)
T ss_dssp EECCSTTTCCEECTTTCCTTTBCCCSSCEEEETTEEEESSSSCEESSHHHHTTCCCSSCBCCCSCC
T ss_pred cccCCCCCCCEecCCCCCCCCeECCCCCcccCCCCeeeCCCCCcccCHHHhccCCCcccccccCCC
Confidence 689999999999999999999999999999999999999999999999999999999999998653
No 3
>2xcm_E RAR1, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana}
Probab=99.96 E-value=5.9e-31 Score=213.37 Aligned_cols=64 Identities=33% Similarity=0.735 Sum_probs=62.1
Q ss_pred CCCCCCCcccccCccceeeCCCCCccceEeeCCCCccccCCcccccccccccchHhhhccccee
Q psy6601 380 SSIPLGTKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLHYTHYL 443 (459)
Q Consensus 380 ~~I~iGt~Ckn~GC~~~y~g~~s~~~~C~yHpG~PIFHEGmK~WSCCkrktsDF~~FL~i~~~~ 443 (459)
.+|++|+.|+|.||+++|.+.+|.++.|+||||+|||||||||||||++||+||++||+||||-
T Consensus 4 ~~i~~~~~C~n~GC~~~f~~~~n~~~~C~yHpG~PvFHdg~K~WsCC~k~~~dF~~Fl~i~GCt 67 (74)
T 2xcm_E 4 IDINQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 67 (74)
T ss_dssp CCTTSCEECCSBTTCCEECSTTCCTTCEEEBCCCEEEETTEEEETTTTEECSSHHHHTTCCCCE
T ss_pred EccCCCCcEECCCcCCEecCCCCCCCceEecCCCceeCCCCeeeCCCCCcccChhHhccCCCcc
Confidence 4699999999999999999999999999999999999999999999999999999999999996
No 4
>2yrt_A Chord containing protein-1; CHP1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=5.3e-29 Score=202.44 Aligned_cols=58 Identities=41% Similarity=0.866 Sum_probs=56.4
Q ss_pred CcccccCccceeeCCCCCccceEeeCCCCccccCCcccccccccccchHhhhccccee
Q psy6601 386 TKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLHYTHYL 443 (459)
Q Consensus 386 t~Ckn~GC~~~y~g~~s~~~~C~yHpG~PIFHEGmK~WSCCkrktsDF~~FL~i~~~~ 443 (459)
+.|+|.||+++|.+.+|.++.|+||||+|||||||||||||++|++||++||+||||-
T Consensus 10 ~~C~n~GC~~~f~~~~n~~~~C~yHpG~PvFHdg~K~WsCC~kk~~dF~~Fl~i~GCt 67 (75)
T 2yrt_A 10 LLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 67 (75)
T ss_dssp EECCSTTTCCEECTTTCCTTTBCCCSSCEEEETTEEEESSSSCEESSHHHHTTCCCSS
T ss_pred cccCCCCCCCEecCCCCCCCCeECCCCCcccCCCCeeeCCCCCcccCHHHhccCCCcc
Confidence 6899999999999999999999999999999999999999999999999999999994
No 5
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.68 E-value=5.8e-17 Score=128.92 Aligned_cols=86 Identities=20% Similarity=0.239 Sum_probs=80.3
Q ss_pred eecccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecceeeeeEEe
Q psy6601 220 KCRLDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTKAGPAAI 299 (459)
Q Consensus 220 ~CR~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK~Ei~l~ 299 (459)
+||+|||||.+.|.|+||++.+.++...|.+++..|.|.+..+ +++.|..+++|||.|| +++|++++.++||+|+|.
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~-~~~~y~~~~~L~~~I~--~~~s~~~~~~~~l~i~L~ 78 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP-GEDAYYLQPRLFGKII--PDKCKYEVLSTKIEICLA 78 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT-TSCCEEECCBBSSCBC--GGGCEEEECSSCEEEEEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC-CCcEEEEeeEcCCccC--chhEEEEEECCEEEEEEE
Confidence 5899999999999999999999999999999999999999874 6788999999999999 999999999999999999
Q ss_pred ecCCccCCC
Q psy6601 300 KNGCTVSSH 308 (459)
Q Consensus 300 Ka~~~~~~h 308 (459)
|++...|++
T Consensus 79 K~~~~~W~~ 87 (92)
T 2xcm_C 79 KADIITWAS 87 (92)
T ss_dssp BSSSCCCSC
T ss_pred cCCCCcchh
Confidence 999886654
No 6
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.68 E-value=6.5e-17 Score=141.75 Aligned_cols=89 Identities=12% Similarity=0.155 Sum_probs=80.9
Q ss_pred eeeccccccc-CceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCCC-----------ceeeeeeeeeeeeccccceeE
Q psy6601 219 VKCRLDWFQT-GSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEED-----------GNYQQDIELRGMLAHTIQEIL 286 (459)
Q Consensus 219 v~CR~DwyQT-~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~~-----------k~y~~~i~L~G~ID~~~~kS~ 286 (459)
..||+||||| .+.|+|+||+|.+.++...|+|++..|.|.+..+.++ ..|..+++||+.|| |++|+
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~--pe~S~ 95 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIE--PEQCT 95 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEE--EEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCC--chhCE
Confidence 4699999999 9999999999999999999999999999999885322 28999999999999 99999
Q ss_pred EEecceeeeeEEeecCCccCCCC
Q psy6601 287 CSMMHTKAGPAAIKNGCTVSSHN 309 (459)
Q Consensus 287 ~~~~~TK~Ei~l~Ka~~~~~~h~ 309 (459)
++++++||||+|+|+++..|++-
T Consensus 96 ~~v~~~kIeI~L~K~e~~~W~~L 118 (134)
T 1wh0_A 96 FCFTASRIDICLRKRQSQRWGGL 118 (134)
T ss_dssp EEECSSEEEEEEEESSSCCCSCS
T ss_pred EEEeCCEEEEEEEECCCCccccc
Confidence 99999999999999998766653
No 7
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=5.8e-16 Score=132.53 Aligned_cols=87 Identities=9% Similarity=-0.036 Sum_probs=79.3
Q ss_pred eeecccccccCceEEEEEEeeec---CCCCcEEEecCeEEEEEEecCCCCceeeeeee-eeeeeccccceeEEEecceee
Q psy6601 219 VKCRLDWFQTGSTVVVSIFGKKY---DPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIE-LRGMLAHTIQEILCSMMHTKA 294 (459)
Q Consensus 219 v~CR~DwyQT~~~V~VSVyaKk~---dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~-L~G~ID~~~~kS~~~~~~TK~ 294 (459)
--||+|||||.+.|.|+||+|.+ .++...|+|+++.|.|.+..+ ++++|..+++ |||.|| +++|.++++++||
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~-~~~~y~~~~~~L~~~I~--~e~S~~~v~~~kV 95 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL-NGKSYSMIVNNLLKPIS--VEGSSKKVKTDTV 95 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC-SSSCEEEEEECBSSCCC--TTTCEEEEETTEE
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC-CCCcEEEEhHHhcCccC--cccCEEEEeCCEE
Confidence 35899999999999999999999 889999999999999999774 6688999996 999999 9999999999999
Q ss_pred eeEEeecCCc-cCCC
Q psy6601 295 GPAAIKNGCT-VSSH 308 (459)
Q Consensus 295 Ei~l~Ka~~~-~~~h 308 (459)
+|+|+|++.. .|++
T Consensus 96 ei~L~K~~~~~~W~~ 110 (127)
T 1x5m_A 96 LILCRKKVENTRWDY 110 (127)
T ss_dssp EEEEECSSSSCCCSS
T ss_pred EEEEEECCCCCCCCc
Confidence 9999999986 4543
No 8
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.58 E-value=3e-15 Score=124.35 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=81.2
Q ss_pred eeecccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecceeeeeEE
Q psy6601 219 VKCRLDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTKAGPAA 298 (459)
Q Consensus 219 v~CR~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK~Ei~l 298 (459)
..||+|||||.+.|.|+||++.+.++...|.+++..|.|.+..+ +++.|..+++||+.|| +++|++++.++||+|+|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~-~~~~y~~~~~L~~~I~--~e~s~~~~~~~~l~i~L 84 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP-SGEDYNLKLELLHPII--PEQSTFKVLSTKIEIKL 84 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT-TSSEEEEEECBSSCCC--GGGEEEEECSSSEEEEE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC-CCcEEEEEeeCCCcCC--ccccEEEEECCEEEEEE
Confidence 46999999999999999999999999999999999999999884 6788999999999999 99999999999999999
Q ss_pred eecCCccCCCC
Q psy6601 299 IKNGCTVSSHN 309 (459)
Q Consensus 299 ~Ka~~~~~~h~ 309 (459)
.|++...|++-
T Consensus 85 ~K~~~~~W~~L 95 (114)
T 1rl1_A 85 KKPEAVRWEKL 95 (114)
T ss_dssp ECSSCCCCSSS
T ss_pred EcCCCCcCccc
Confidence 99998855543
No 9
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.52 E-value=1.3e-14 Score=128.98 Aligned_cols=83 Identities=10% Similarity=0.004 Sum_probs=75.3
Q ss_pred ecccccccCceEEEEEEeeecCCCCcEEEec-CeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecceeeeeEEe
Q psy6601 221 CRLDWFQTGSTVVVSIFGKKYDPLRSKVLLS-PVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTKAGPAAI 299 (459)
Q Consensus 221 CR~DwyQT~~~V~VSVyaKk~dp~~S~V~~~-~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK~Ei~l~ 299 (459)
=|++||||.+.|+|+||+|.+ ....|+|+ ++.|.+.+. +.+++.|..+++|||.|| |+ |+++++++||+|+|+
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~~~~~~y~~~l~L~~~Id--pe-S~~~v~~~kIei~L~ 78 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGKIM--TE-YRKNVGLRNIIFSIQ 78 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-TTTTEEEEEEEEBSSCEE--EE-EEEEEESSSEEEEEE
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-cCCCceEEEEeEhhhccc--cc-ceEEecCCEEEEEEE
Confidence 379999999999999999987 46889999 799999988 457789999999999999 99 999999999999999
Q ss_pred ecCCccCCCC
Q psy6601 300 KNGCTVSSHN 309 (459)
Q Consensus 300 Ka~~~~~~h~ 309 (459)
|+++..|++=
T Consensus 79 K~e~~~W~rL 88 (150)
T 2kmw_A 79 KEERSWWTRL 88 (150)
T ss_dssp ECCSSCCSCS
T ss_pred ECCCCcCccc
Confidence 9998888764
No 10
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.51 E-value=2.2e-14 Score=122.63 Aligned_cols=83 Identities=8% Similarity=0.029 Sum_probs=75.0
Q ss_pred cccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecceeeeeEEeec
Q psy6601 222 RLDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTKAGPAAIKN 301 (459)
Q Consensus 222 R~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK~Ei~l~Ka 301 (459)
|++||||.+.|.|+||++.+ ....|+|+++.|.+.+..+.+++.|..+++|||.|| |++|+++++++||+|+|+|+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~--~e~S~~~v~~~kiei~L~K~ 80 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCID--PNDSKHKRTDRSILCCLRKG 80 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEE--EEEEEEEECSSCEEEEEEES
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceec--cccCEEEECCCEEEEEEEEC
Confidence 78999999999999999986 578899999999998876566788999999999999 99999999999999999999
Q ss_pred CCc-cCCC
Q psy6601 302 GCT-VSSH 308 (459)
Q Consensus 302 ~~~-~~~h 308 (459)
+.. .|++
T Consensus 81 ~~~~~W~r 88 (125)
T 1ejf_A 81 ESGQSWPR 88 (125)
T ss_dssp STTCCCSS
T ss_pred CCCCCCCc
Confidence 865 5554
No 11
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.36 E-value=4.5e-13 Score=116.49 Aligned_cols=85 Identities=14% Similarity=0.168 Sum_probs=70.2
Q ss_pred ecccccccCce-------EEEEEEeeecCCCCcEEEecCeEEEEEEecCC-----CCceeeeeeeeeeeeccccceeEEE
Q psy6601 221 CRLDWFQTGST-------VVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPE-----EDGNYQQDIELRGMLAHTIQEILCS 288 (459)
Q Consensus 221 CR~DwyQT~~~-------V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~-----~~k~y~~~i~L~G~ID~~~~kS~~~ 288 (459)
=|++||||.+. |.|+||++.+. ...|.|++..|.+.+..+. +++.|..+++|||.|| |++|.++
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Id--pe~S~~~ 82 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEII--PEKTMHK 82 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCC--SSSEEEE
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhcc--ccccEEE
Confidence 47999999998 99999999873 7889999999999888753 3578999999999999 9999999
Q ss_pred eccee-eeeEEeecC--CccCCCC
Q psy6601 289 MMHTK-AGPAAIKNG--CTVSSHN 309 (459)
Q Consensus 289 ~~~TK-~Ei~l~Ka~--~~~~~h~ 309 (459)
++++| |+|+|+|++ +..|++=
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL 106 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRL 106 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCS
T ss_pred ECCCEEEEEEEEECCCCCCCCCce
Confidence 99999 999999998 4566653
No 12
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=98.96 E-value=1.6e-09 Score=93.19 Aligned_cols=81 Identities=11% Similarity=0.026 Sum_probs=67.5
Q ss_pred ecccccccCceEEEEEEe-eecCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecceeeeeEEe
Q psy6601 221 CRLDWFQTGSTVVVSIFG-KKYDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTKAGPAAI 299 (459)
Q Consensus 221 CR~DwyQT~~~V~VSVya-Kk~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK~Ei~l~ 299 (459)
-|++||||.+.|.|+|+. +.+++....|.|.+..|.|.+. +. . -.+.+|||.|| ++.|++++.++||+|+|.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~-~-~~~~~L~~~I~--~e~S~w~i~~~kv~i~L~ 77 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GE-I-VIDGELLHEVD--VSSLWWVINGDVVDVNVT 77 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TE-E-EEEEEBSSCEE--EEEEEEEEETTEEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CE-e-eEccccccccc--cccCEEEEeCCEEEEEEE
Confidence 589999999999999996 7888999999999999998873 22 3 56789999999 999999999999999999
Q ss_pred ecCCccCCC
Q psy6601 300 KNGCTVSSH 308 (459)
Q Consensus 300 Ka~~~~~~h 308 (459)
|+....|++
T Consensus 78 K~~~~~W~~ 86 (131)
T 2o30_A 78 KKRNEWWDS 86 (131)
T ss_dssp ESSCCCCSC
T ss_pred ECCCCCCcc
Confidence 995444444
No 13
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.88 E-value=4.7e-09 Score=89.41 Aligned_cols=85 Identities=15% Similarity=0.052 Sum_probs=72.9
Q ss_pred ecccccccCceEEEEEEee-ec-CCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEeccee-eeeE
Q psy6601 221 CRLDWFQTGSTVVVSIFGK-KY-DPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTK-AGPA 297 (459)
Q Consensus 221 CR~DwyQT~~~V~VSVyaK-k~-dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK-~Ei~ 297 (459)
=|++||||.+.|.|+|+.. .+ ++..-.|.|.+..|.|.+.-+ .+..|-.+.+||+.|| +++|+.++..+| |+|+
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~-~~~~~~~~~~L~~~I~--~e~S~w~i~~~k~v~i~ 96 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE-NGERVLMEGKLTHKIN--TESSLWSLEPGKCVLVN 96 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS-SSEEEEEEEEBSSCBC--TTTCEEEECTTSEEEEE
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc-CCCceEEcccccCcCC--CcCCEEEEeCCCEEEEE
Confidence 3899999999999999965 55 778889999999999987642 3455778999999999 999999999999 9999
Q ss_pred EeecCCccCCC
Q psy6601 298 AIKNGCTVSSH 308 (459)
Q Consensus 298 l~Ka~~~~~~h 308 (459)
|.|++...|++
T Consensus 97 L~K~~~~~W~~ 107 (124)
T 1wgv_A 97 LSKVGEYWWNA 107 (124)
T ss_dssp ECBSSSCCCSC
T ss_pred EEECCCCCCcC
Confidence 99998765544
No 14
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=98.65 E-value=4.7e-08 Score=83.82 Aligned_cols=89 Identities=17% Similarity=0.016 Sum_probs=72.9
Q ss_pred cceeecccccccCceEEEEEEeee---cCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEeccee
Q psy6601 217 GQVKCRLDWFQTGSTVVVSIFGKK---YDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTK 293 (459)
Q Consensus 217 ~~v~CR~DwyQT~~~V~VSVyaKk---~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK 293 (459)
.-..-++.||||.+.|.|+|.... +.+..-.|.|.+..|.|.+. + ..+-.+.+||+.|+ ++.|+.++...|
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g-~~~~~~~~L~~~I~--~e~s~w~i~~~k 77 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---G-QPPVVDGELYNEVK--VEESSWLIEDGK 77 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---T-SCCSBCSCBSSCBC--STTCEEEEETTT
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---C-ceEEEecccccccc--cccCEEEEcCCC
Confidence 334458999999999999999774 77888899999999998863 2 23557889999999 999999999987
Q ss_pred -eeeEEeecCCccCCCCCC
Q psy6601 294 -AGPAAIKNGCTVSSHNPV 311 (459)
Q Consensus 294 -~Ei~l~Ka~~~~~~h~~~ 311 (459)
|+|+|.|++...|+-+=.
T Consensus 78 ~v~i~L~K~~~~~~W~~L~ 96 (131)
T 1wfi_A 78 VVTVHLEKINKMEWWNRLV 96 (131)
T ss_dssp EEEEEEEBSSSCCCCSCSB
T ss_pred EEEEEEEECCCCCCChhhh
Confidence 999999998764444333
No 15
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=98.47 E-value=3e-07 Score=82.06 Aligned_cols=81 Identities=11% Similarity=-0.020 Sum_probs=68.6
Q ss_pred ecccccccCceEEEEEEee-ecCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEeccee-eeeEE
Q psy6601 221 CRLDWFQTGSTVVVSIFGK-KYDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMHTK-AGPAA 298 (459)
Q Consensus 221 CR~DwyQT~~~V~VSVyaK-k~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~TK-~Ei~l 298 (459)
-++.||||.+.|.|+|... .+.+..-.|.+.+..|.|.+. +. .| .+.+||+.|+ ++.|+.++..+| |+|+|
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~-~~-l~g~L~~~I~--~eeS~w~i~~~k~v~I~L 86 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GR-EI-LKGKLFDSTI--ADEGTWTLEDRKMVRIVL 86 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TE-EE-EEEEBSSCBC--GGGCEEEEECCCEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CE-EE-EeeccccccC--ccccEEEEcCCcEEEEEE
Confidence 4799999999999999964 667778899999999998874 22 34 7889999999 999999999999 99999
Q ss_pred eecCC--ccCCC
Q psy6601 299 IKNGC--TVSSH 308 (459)
Q Consensus 299 ~Ka~~--~~~~h 308 (459)
.|++. ..||-
T Consensus 87 ~K~~~~~~~~W~ 98 (157)
T 2rh0_A 87 TKTKRDAANCWT 98 (157)
T ss_dssp EBSSCSTTCCCS
T ss_pred EEcCCCcCCcCh
Confidence 99886 34443
No 16
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.35 E-value=1.4e-06 Score=74.35 Aligned_cols=92 Identities=16% Similarity=-0.027 Sum_probs=72.8
Q ss_pred cccceeecccccccCceEEEEEEeee---cCCCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeeeccccceeEEEecc
Q psy6601 215 EKGQVKCRLDWFQTGSTVVVSIFGKK---YDPLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGMLAHTIQEILCSMMH 291 (459)
Q Consensus 215 ~~~~v~CR~DwyQT~~~V~VSVyaKk---~dp~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~ID~~~~kS~~~~~~ 291 (459)
+.....=++.|+||.+.|.|+|.... +....-.|.+.+..|.|.+. +..|-.+.+||+.|+ ++.|+.++..
T Consensus 11 ~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k----g~~~~~~g~L~~~I~--~deS~w~i~~ 84 (121)
T 3qor_A 11 GNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK----GQPAIIDGELYNEVK--VEESSWLIAD 84 (121)
T ss_dssp TSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET----TSCCSEEEEBSSCBC--GGGCEEEEET
T ss_pred CCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc----CcceEEecccccccc--ccccEEEEcC
Confidence 33334448999999999999997654 67778889999999987653 124667889999999 9999999997
Q ss_pred e-eeeeEEeecCCccCCCCCCC
Q psy6601 292 T-KAGPAAIKNGCTVSSHNPVK 312 (459)
Q Consensus 292 T-K~Ei~l~Ka~~~~~~h~~~K 312 (459)
. +|+|+|.|+..+.|+.+=.+
T Consensus 85 ~~~i~i~L~K~~~~~~W~~L~~ 106 (121)
T 3qor_A 85 GAVVTVHLEKINKMEWWSRLVS 106 (121)
T ss_dssp TTEEEEEEEBSSSSCCCSCSBT
T ss_pred CCEEEEEEEECCCCCCChhhhc
Confidence 6 89999999987655544443
No 17
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=95.57 E-value=0.062 Score=43.84 Aligned_cols=85 Identities=13% Similarity=0.060 Sum_probs=72.2
Q ss_pred cccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC---------CceeeeeeeeeeeeccccceeEEEecce
Q psy6601 222 RLDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE---------DGNYQQDIELRGMLAHTIQEILCSMMHT 292 (459)
Q Consensus 222 R~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~---------~k~y~~~i~L~G~ID~~~~kS~~~~~~T 292 (459)
+.|+|+|++.++|.+..=.+.++.-.|.+....|.|.-....+ ...|.+.|.|=..|| +++...+|-.=
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd--~~~i~A~~~~G 85 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVR--PASGVASLAGG 85 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBC--TTCCEEEEETT
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcc--hhHcEEEEECC
Confidence 5799999999999999999999999999999988886544221 136999999999999 88888888888
Q ss_pred eeeeEEeecCCccCCC
Q psy6601 293 KAGPAAIKNGCTVSSH 308 (459)
Q Consensus 293 K~Ei~l~Ka~~~~~~h 308 (459)
-++|+|.|...+...|
T Consensus 86 vL~I~lpK~~~~~d~~ 101 (102)
T 4fei_A 86 VLTVRFEKLRPTIDVT 101 (102)
T ss_dssp EEEEEEEBSSCCCCCC
T ss_pred EEEEEEEccCccccCC
Confidence 8999999988776655
No 18
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=95.35 E-value=0.048 Score=43.88 Aligned_cols=80 Identities=15% Similarity=0.044 Sum_probs=67.4
Q ss_pred cccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC--------------CceeeeeeeeeeeeccccceeEE
Q psy6601 222 RLDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE--------------DGNYQQDIELRGMLAHTIQEILC 287 (459)
Q Consensus 222 R~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~--------------~k~y~~~i~L~G~ID~~~~kS~~ 287 (459)
+.|+|+|++.++|.+-.-.+.++.-.|.++...|.|.-..... .++|.+.|.|=..|| +++.+.
T Consensus 6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd--~~~i~A 83 (100)
T 3gla_A 6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSAD--ADGITA 83 (100)
T ss_dssp CEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBC--TTSCEE
T ss_pred cEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcC--hHHeEE
Confidence 5799999999999999999999999999999999887655321 236999999999999 888888
Q ss_pred EecceeeeeEEeecCC
Q psy6601 288 SMMHTKAGPAAIKNGC 303 (459)
Q Consensus 288 ~~~~TK~Ei~l~Ka~~ 303 (459)
+|-.=-++|+|.|...
T Consensus 84 ~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 84 AGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEETTEEEEEEEBC--
T ss_pred EEeCCEEEEEEecCCC
Confidence 8888889999988643
No 19
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=93.26 E-value=0.31 Score=42.76 Aligned_cols=79 Identities=8% Similarity=-0.017 Sum_probs=68.4
Q ss_pred ccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCC---------------CCceeeeeeeeeeeeccccceeEE
Q psy6601 223 LDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPE---------------EDGNYQQDIELRGMLAHTIQEILC 287 (459)
Q Consensus 223 ~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~---------------~~k~y~~~i~L~G~ID~~~~kS~~ 287 (459)
.|+|+|++.++|.+.+-.+.++.-.|.++...|.|.-.... ....|.+.|.|=..|| +++...
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd--~~~i~A 136 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK--EENASA 136 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBC--GGGCEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcc--cccEEE
Confidence 79999999999999999999999999999999998776543 2357999999999999 888888
Q ss_pred EecceeeeeEEeecCC
Q psy6601 288 SMMHTKAGPAAIKNGC 303 (459)
Q Consensus 288 ~~~~TK~Ei~l~Ka~~ 303 (459)
++-.=-++|+|.|+..
T Consensus 137 ~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 137 KFENGVLSVILPKAES 152 (161)
T ss_dssp EEETTEEEEEEEBCGG
T ss_pred EEECCEEEEEEEcCCC
Confidence 8777789999988654
No 20
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=93.10 E-value=0.34 Score=40.63 Aligned_cols=81 Identities=15% Similarity=0.039 Sum_probs=68.3
Q ss_pred ecccccccCceEEEEEEeeecCCCCcEEEecC-eEEEEEEecCCCC-c---------eeeeeeeeeeeecccccee-EEE
Q psy6601 221 CRLDWFQTGSTVVVSIFGKKYDPLRSKVLLSP-VRLKVDLYFPEED-G---------NYQQDIELRGMLAHTIQEI-LCS 288 (459)
Q Consensus 221 CR~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~-~~l~v~l~fp~~~-k---------~y~~~i~L~G~ID~~~~kS-~~~ 288 (459)
=+.|+|+|++.++|.+..-.+.++.-.|.++. ..|.|.-.-.... . +|.+.|.|=..|| +++. +.+
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd--~~~i~~A~ 102 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVA--KDAEISGK 102 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEEC--TTCCCEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcC--cchhCeeE
Confidence 36899999999999999999999999999999 8898887764221 1 7999999999999 8887 777
Q ss_pred ecceeeeeEEeecCC
Q psy6601 289 MMHTKAGPAAIKNGC 303 (459)
Q Consensus 289 ~~~TK~Ei~l~Ka~~ 303 (459)
+-.=-+.|+|.|...
T Consensus 103 ~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 103 YENGVLTIRIPIAGT 117 (123)
T ss_dssp EETTEEEEEEEGGGE
T ss_pred EcCCEEEEEEEcCCC
Confidence 777788999987543
No 21
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=92.98 E-value=0.37 Score=42.13 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=67.8
Q ss_pred eecccccccCceEEEEEEeeecCCCCcEEEe-cCeEEEEEEecCCC--------------Cceeeeeeeeeeeeccccce
Q psy6601 220 KCRLDWFQTGSTVVVSIFGKKYDPLRSKVLL-SPVRLKVDLYFPEE--------------DGNYQQDIELRGMLAHTIQE 284 (459)
Q Consensus 220 ~CR~DwyQT~~~V~VSVyaKk~dp~~S~V~~-~~~~l~v~l~fp~~--------------~k~y~~~i~L~G~ID~~~~k 284 (459)
.=+.|||+|++.++|.+..-.++++.-.|.+ +...|.|.-.-... ...|.+.|.|=..|| +++
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd--~~~ 120 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAK--VEE 120 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCC--GGG
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcc--ccc
Confidence 3478999999999999999999999999999 67788887654321 246999999999999 888
Q ss_pred eEEEecceeeeeEEeecC
Q psy6601 285 ILCSMMHTKAGPAAIKNG 302 (459)
Q Consensus 285 S~~~~~~TK~Ei~l~Ka~ 302 (459)
...+|-.=-++|+|.|..
T Consensus 121 i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEEETTEEEEEEECCC
T ss_pred eEEEEECCEEEEEEEccC
Confidence 888887778999998853
No 22
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=91.76 E-value=0.67 Score=37.87 Aligned_cols=77 Identities=10% Similarity=0.040 Sum_probs=64.5
Q ss_pred ccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC--C-----ceeeeeeeeeeeeccccceeEEEe-cceee
Q psy6601 223 LDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE--D-----GNYQQDIELRGMLAHTIQEILCSM-MHTKA 294 (459)
Q Consensus 223 ~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~--~-----k~y~~~i~L~G~ID~~~~kS~~~~-~~TK~ 294 (459)
.|+|+|++.++|.+-.-.+.++.-.|.+....|.|.-..... + .+|.+.|.|=..|| +++...+| -.=-+
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd--~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVD--PAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBC--TTCCEEEECTTSEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcC--hhHCEEEECCCCEE
Confidence 599999999999999999999999999988888887665321 1 34999999999999 88888888 45568
Q ss_pred eeEEeec
Q psy6601 295 GPAAIKN 301 (459)
Q Consensus 295 Ei~l~Ka 301 (459)
.|+|.|.
T Consensus 82 ~I~lPK~ 88 (101)
T 2wj5_A 82 SIQATPA 88 (101)
T ss_dssp EEEECBC
T ss_pred EEEEECC
Confidence 8999774
No 23
>2e6i_A Tyrosine-protein kinase ITK/TSK; BTK, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.00 E-value=0.28 Score=38.99 Aligned_cols=32 Identities=25% Similarity=0.651 Sum_probs=23.2
Q ss_pred CccccceecCCCcccccCCcccccCCCcccchhhhccCCCCc
Q psy6601 101 SLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCT 142 (459)
Q Consensus 101 N~~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt 142 (459)
|..-.-.||||. |-+|. |+||.... ..-+||+
T Consensus 8 N~~ll~~yHPg~--~~~Gk--W~CC~q~~------k~a~GC~ 39 (64)
T 2e6i_A 8 NNSLVPKYHPNF--WMDGK--WRCCSQLE------KLATGCA 39 (64)
T ss_dssp CCSSCCEECSSC--BCSSS--BSSSCCSC------TTCCCCE
T ss_pred ChhhhhhcCCCc--eeCCe--ECCCCCCC------ccCCCCc
Confidence 445567899997 44554 99998665 4567998
No 24
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=88.71 E-value=0.25 Score=43.06 Aligned_cols=31 Identities=19% Similarity=0.587 Sum_probs=22.0
Q ss_pred cccceecCCCcccccCCcccccCCCcccchhhhccCCCCcc
Q psy6601 103 STICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCTH 143 (459)
Q Consensus 103 ~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt~ 143 (459)
.-.=.||||. |-+| .||||+... ...+||+.
T Consensus 125 ~~~~~yHpg~--~~~~--~w~CC~~~~------~~a~GC~~ 155 (164)
T 2lul_A 125 NIMIKYHPKF--WTDG--SYQCCRQTE------KLAPGCEK 155 (164)
T ss_dssp CCCSEECCSC--CCTT--CCCSSSCTT------SCCCCSEE
T ss_pred hhhhhcCCCc--ccCC--eEeeCCCCC------CCCCCCcc
Confidence 3445799998 4344 499998665 46789976
No 25
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=86.80 E-value=1.3 Score=36.54 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=66.0
Q ss_pred ccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCC--CC-----ceeeeeeeeeeeeccccceeEEEe-cceee
Q psy6601 223 LDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPE--ED-----GNYQQDIELRGMLAHTIQEILCSM-MHTKA 294 (459)
Q Consensus 223 ~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~--~~-----k~y~~~i~L~G~ID~~~~kS~~~~-~~TK~ 294 (459)
.|+|.|++.++|.+-.-.+.|+.-.|.+....|.|.-...+ ++ .+|.+.|.|=..|| +++...+| -.--+
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd--~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVD--QSALSCSLSADGML 82 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBC--TTSCEEEECTTSEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcC--hhHcEEEECCCCEE
Confidence 37899999999999999999999999999988888764421 11 45999999999999 99988888 46678
Q ss_pred eeEEeecCC
Q psy6601 295 GPAAIKNGC 303 (459)
Q Consensus 295 Ei~l~Ka~~ 303 (459)
.|+|.|...
T Consensus 83 ~I~~PK~~~ 91 (106)
T 3l1e_A 83 TFSGPKIPS 91 (106)
T ss_dssp EEEEEBCCC
T ss_pred EEEEEccCc
Confidence 999988544
No 26
>2ys2_A Cytoplasmic tyrosine-protein kinase BMX; bone marrow tyrosine kinase gene in chromosome X protein, epithelial and endothelial tyrosine kinase, ETK; NMR {Homo sapiens}
Probab=83.86 E-value=0.6 Score=35.45 Aligned_cols=32 Identities=28% Similarity=0.613 Sum_probs=22.5
Q ss_pred CccccceecCCCcccccCCcccccCCCcccchhhhccCCCCc
Q psy6601 101 SLSTICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCT 142 (459)
Q Consensus 101 N~~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt 142 (459)
|..-.-.||||.-+ +| .|+||+... ..-+||+
T Consensus 8 N~~~l~~YHPg~~~--~g--~W~CC~q~~------k~a~GC~ 39 (50)
T 2ys2_A 8 NPHLLVKYHSGFFV--DG--KFLCCQQSC------KAAPGCT 39 (50)
T ss_dssp CSCCSCCCCSSCEE--TT--EESSSCCSS------SSCCCCC
T ss_pred CcchhhhcCCCccc--CC--eECCCCCCC------ccCCCCc
Confidence 44445789999743 44 499998654 4568998
No 27
>2e6i_A Tyrosine-protein kinase ITK/TSK; BTK, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.18 E-value=0.67 Score=36.79 Aligned_cols=23 Identities=26% Similarity=0.740 Sum_probs=16.8
Q ss_pred ccceEeeCCCCccccCCcccccccccc
Q psy6601 404 STICVHHAGVPVFHEGLKFWSCCTKKT 430 (459)
Q Consensus 404 ~~~C~yHpG~PIFHEGmK~WSCCkrkt 430 (459)
.-.-.||||. |-+|+ |+||....
T Consensus 10 ~ll~~yHPg~--~~~Gk--W~CC~q~~ 32 (64)
T 2e6i_A 10 SLVPKYHPNF--WMDGK--WRCCSQLE 32 (64)
T ss_dssp SSCCEECSSC--BCSSS--BSSSCCSC
T ss_pred hhhhhcCCCc--eeCCe--ECCCCCCC
Confidence 3357899996 55665 99999653
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=76.81 E-value=11 Score=29.79 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=60.3
Q ss_pred cccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC-------CceeeeeeeeeeeeccccceeEEEec-ceeeeeE
Q psy6601 226 FQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE-------DGNYQQDIELRGMLAHTIQEILCSMM-HTKAGPA 297 (459)
Q Consensus 226 yQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~-------~k~y~~~i~L~G~ID~~~~kS~~~~~-~TK~Ei~ 297 (459)
.+|++.++|.+-.-.+.|+.-.|.+....|.|.-...+. ..+|.+.|.|=..|| +++...++. .==+.|+
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd--~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVD--PTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCC--GGGCEEEECTTSEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcC--hHHcEEEECCCCEEEEE
Confidence 468889999999999999999999988888887665321 257999999999999 888888887 6667888
Q ss_pred Eeec
Q psy6601 298 AIKN 301 (459)
Q Consensus 298 l~Ka 301 (459)
|.|.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 7663
No 29
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=76.22 E-value=9.5 Score=37.56 Aligned_cols=81 Identities=14% Similarity=0.034 Sum_probs=68.8
Q ss_pred ecccccccCc----eEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC------CceeeeeeeeeeeeccccceeEEEec
Q psy6601 221 CRLDWFQTGS----TVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE------DGNYQQDIELRGMLAHTIQEILCSMM 290 (459)
Q Consensus 221 CR~DwyQT~~----~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~------~k~y~~~i~L~G~ID~~~~kS~~~~~ 290 (459)
=+.|.|.|+. .++|.+-.-.+.|+.-.|.+....|.|.-..... ..+|.+.|.|=..|| +++...++-
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd--~e~i~A~~~ 176 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVD--RNHIQATIT 176 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBC--GGGCEEEEC
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCcc--ccccEEEEe
Confidence 4789999999 9999999999999999999999999887765421 157999999999999 888888887
Q ss_pred -ceeeeeEEeecCC
Q psy6601 291 -HTKAGPAAIKNGC 303 (459)
Q Consensus 291 -~TK~Ei~l~Ka~~ 303 (459)
.=-+.|+|.|...
T Consensus 177 ~nGVL~I~lPK~~~ 190 (314)
T 2bol_A 177 TDDVLVIEAPVNEP 190 (314)
T ss_dssp SSSEEEEEEEBSSC
T ss_pred CCCEEEEEEeccCc
Confidence 7778899988654
No 30
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=74.71 E-value=4.2 Score=36.74 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=61.8
Q ss_pred ccccccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCCC--C-----ceeeeeeeeeeeeccccceeEEEe-cceee
Q psy6601 223 LDWFQTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPEE--D-----GNYQQDIELRGMLAHTIQEILCSM-MHTKA 294 (459)
Q Consensus 223 ~DwyQT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~~--~-----k~y~~~i~L~G~ID~~~~kS~~~~-~~TK~ 294 (459)
.|+|+|.+.++|.+-.-.+.|+.-.|++....|.|.-...+. + ++|.+.|.|=..|| +++...++ -.=-+
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd--~~~i~A~~s~dGvL 143 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD--PLTITSSLSSDGVL 143 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCC--TTTCEEEECTTSCE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcC--hhHeEEEEcCCCEE
Confidence 599999999999999999999999999988888887655321 1 35999999999999 88888888 36678
Q ss_pred eeEEeec
Q psy6601 295 GPAAIKN 301 (459)
Q Consensus 295 Ei~l~Ka 301 (459)
.|+|.|.
T Consensus 144 ~I~lPK~ 150 (175)
T 2klr_A 144 TVNGPRK 150 (175)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 8999884
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=69.66 E-value=8 Score=30.64 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=54.7
Q ss_pred ccCceEEEEEEeeecCCCCcEEEecCeEEEEEEecCC--CC-----ceeeeeeeeeeeeccccceeEEEe-cceeeeeEE
Q psy6601 227 QTGSTVVVSIFGKKYDPLRSKVLLSPVRLKVDLYFPE--ED-----GNYQQDIELRGMLAHTIQEILCSM-MHTKAGPAA 298 (459)
Q Consensus 227 QT~~~V~VSVyaKk~dp~~S~V~~~~~~l~v~l~fp~--~~-----k~y~~~i~L~G~ID~~~~kS~~~~-~~TK~Ei~l 298 (459)
.|++.++|.+-.-.+.++.-.|.+....|.|.-.... ++ ++|.+.|.|=..|| +++...+| -.=-+.|+|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd--~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD--PLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBC--GGGCEEEECTTSEEEEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcC--hhHcEEEECCCCEEEEEE
Confidence 4677888888888888988888888878877665431 11 35999999999999 88888888 455688888
Q ss_pred eec
Q psy6601 299 IKN 301 (459)
Q Consensus 299 ~Ka 301 (459)
.|.
T Consensus 81 pK~ 83 (90)
T 2y1y_A 81 PRK 83 (90)
T ss_dssp CBC
T ss_pred EcC
Confidence 774
No 32
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=65.54 E-value=2.6 Score=36.64 Aligned_cols=19 Identities=21% Similarity=0.548 Sum_probs=13.4
Q ss_pred EeeCCCCccccCCcccccccccc
Q psy6601 408 VHHAGVPVFHEGLKFWSCCTKKT 430 (459)
Q Consensus 408 ~yHpG~PIFHEGmK~WSCCkrkt 430 (459)
.||||.= -.| .||||....
T Consensus 129 ~yHpg~~--~~~--~w~CC~~~~ 147 (164)
T 2lul_A 129 KYHPKFW--TDG--SYQCCRQTE 147 (164)
T ss_dssp EECCSCC--CTT--CCCSSSCTT
T ss_pred hcCCCcc--cCC--eEeeCCCCC
Confidence 4999964 344 399998643
No 33
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=59.33 E-value=5 Score=35.22 Aligned_cols=30 Identities=20% Similarity=0.509 Sum_probs=21.2
Q ss_pred cccceecCCCcccccCCcccccCCCcccchhhhccCCCCc
Q psy6601 103 STICVHHAGVPVFHEGLKFWSCCTKKTTEFSAFLEQEGCT 142 (459)
Q Consensus 103 ~~~C~yHPG~PvFHDg~K~WSCCkkkttDF~eFL~i~GCt 142 (459)
.-.=.||||.-+ +| .|+||... ...-+||.
T Consensus 136 ~~~~~~h~~~~~--~~--~w~cc~~~------~~~~~gc~ 165 (169)
T 1btk_A 136 DLVQKYHPCFWI--DG--QYLCCSQT------AKNAMGCQ 165 (169)
T ss_dssp CCCSEECSSCEE--TT--EETTTCCC------CTTSCCSE
T ss_pred chhhccCCCcee--CC--EeccCCCC------CCCCCCCc
Confidence 345688999843 44 69999863 35667997
No 34
>2ys2_A Cytoplasmic tyrosine-protein kinase BMX; bone marrow tyrosine kinase gene in chromosome X protein, epithelial and endothelial tyrosine kinase, ETK; NMR {Homo sapiens}
Probab=57.36 E-value=3.2 Score=31.47 Aligned_cols=20 Identities=25% Similarity=0.670 Sum_probs=14.8
Q ss_pred ceEeeCCCCccccCCccccccccc
Q psy6601 406 ICVHHAGVPVFHEGLKFWSCCTKK 429 (459)
Q Consensus 406 ~C~yHpG~PIFHEGmK~WSCCkrk 429 (459)
.-.||||.= -+|+ |+||+..
T Consensus 12 l~~YHPg~~--~~g~--W~CC~q~ 31 (50)
T 2ys2_A 12 LVKYHSGFF--VDGK--FLCCQQS 31 (50)
T ss_dssp SCCCCSSCE--ETTE--ESSSCCS
T ss_pred hhhcCCCcc--cCCe--ECCCCCC
Confidence 468999964 4554 9999864
No 35
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=50.29 E-value=26 Score=31.11 Aligned_cols=74 Identities=8% Similarity=0.031 Sum_probs=51.8
Q ss_pred ccccCceEEEEEEeeecC--CCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeee-ccccceeEEEecceeeeeEEeec
Q psy6601 225 WFQTGSTVVVSIFGKKYD--PLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGML-AHTIQEILCSMMHTKAGPAAIKN 301 (459)
Q Consensus 225 wyQT~~~V~VSVyaKk~d--p~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~I-D~~~~kS~~~~~~TK~Ei~l~Ka 301 (459)
-=|+...|+|.|++=.+. .....+.+..+.+.+ .. +.|...+.|=|.| |..-+++++..=--.++|+|.|.
T Consensus 8 itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F--~~----~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 8 ITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIF--HL----SPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKL 81 (134)
T ss_dssp EEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEE--CS----SSSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEES
T ss_pred EEECCCEEEEEEEcCccccCccccEEEEeCCEEEE--ec----CCeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCC
Confidence 348999999999998887 555555556665542 22 4588888998998 73334455555556799999996
Q ss_pred CCc
Q psy6601 302 GCT 304 (459)
Q Consensus 302 ~~~ 304 (459)
...
T Consensus 82 ~~G 84 (134)
T 2k8q_A 82 NKN 84 (134)
T ss_dssp STT
T ss_pred CCC
Confidence 544
No 36
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=37.02 E-value=11 Score=32.95 Aligned_cols=19 Identities=21% Similarity=0.597 Sum_probs=14.4
Q ss_pred ceEeeCCCCccccCCcccccccc
Q psy6601 406 ICVHHAGVPVFHEGLKFWSCCTK 428 (459)
Q Consensus 406 ~C~yHpG~PIFHEGmK~WSCCkr 428 (459)
.=.||||.=+ .| .|+||..
T Consensus 138 ~~~~h~~~~~--~~--~w~cc~~ 156 (169)
T 1btk_A 138 VQKYHPCFWI--DG--QYLCCSQ 156 (169)
T ss_dssp CSEECSSCEE--TT--EETTTCC
T ss_pred hhccCCCcee--CC--EeccCCC
Confidence 4678999755 44 5999986
No 37
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=36.82 E-value=30 Score=26.24 Aligned_cols=45 Identities=22% Similarity=0.430 Sum_probs=33.6
Q ss_pred CcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchh
Q psy6601 85 TKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFS 133 (459)
Q Consensus 85 t~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~ 133 (459)
..| ..||..|+++.... ..-.-||.| |-|.-..|.| |+..-.+|.
T Consensus 4 y~C--~~CGyvYd~~~Gdp-~~gi~pGt~-f~~lP~dw~CP~Cga~K~~F~ 50 (55)
T 2v3b_B 4 WQC--VVCGFIYDEALGLP-EEGIPAGTR-WEDIPADWVCPDCGVGKIDFE 50 (55)
T ss_dssp EEE--TTTCCEEETTTCBT-TTTBCTTCC-GGGSCTTCCCTTTCCCGGGEE
T ss_pred EEe--CCCCeEECCCcCCc-ccCcCCCCC-hhHCCCCCcCCCCCCCHHHce
Confidence 467 78999998765333 355668887 8899999999 776666665
No 38
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=36.42 E-value=1.9e+02 Score=25.15 Aligned_cols=80 Identities=10% Similarity=0.079 Sum_probs=51.4
Q ss_pred cceeecccccccCceEEEEEEeeecC--CCCcEEEecCeEEEEEEecCCCCceeeeeeeeeeee-ccccceeEEEeccee
Q psy6601 217 GQVKCRLDWFQTGSTVVVSIFGKKYD--PLRSKVLLSPVRLKVDLYFPEEDGNYQQDIELRGML-AHTIQEILCSMMHTK 293 (459)
Q Consensus 217 ~~v~CR~DwyQT~~~V~VSVyaKk~d--p~~S~V~~~~~~l~v~l~fp~~~k~y~~~i~L~G~I-D~~~~kS~~~~~~TK 293 (459)
++..=|+.==|+...|+|.|++-.+. .....+-++.+....++ +-|-..+.|=|.| |-.-+++++..-.-.
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~------~PYyLRL~lP~~vved~~~~A~YD~d~g~ 87 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL------SPYYLRLRFPHELIDDERSTAQYDSKDEC 87 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE------TTEEEEEECSSCEECSTTCEEEEETTTTE
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec------CCeEEEEecCcceecCCCcceEEeCCCcE
Confidence 33334455559999999999988665 55556666666555433 3366777777877 422455566655556
Q ss_pred eeeEEeecC
Q psy6601 294 AGPAAIKNG 302 (459)
Q Consensus 294 ~Ei~l~Ka~ 302 (459)
+.|+|.|..
T Consensus 88 ~~v~lpK~~ 96 (115)
T 3eud_A 88 INVKVAKLN 96 (115)
T ss_dssp EEEEEEESS
T ss_pred EEEEEcCCc
Confidence 777777744
No 39
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=32.30 E-value=42 Score=25.16 Aligned_cols=45 Identities=24% Similarity=0.499 Sum_probs=33.0
Q ss_pred CcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchh
Q psy6601 85 TKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFS 133 (459)
Q Consensus 85 t~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~ 133 (459)
..| ..||..|+++... ...-.-||.| |-|.-..|.| |+..-.+|.
T Consensus 3 ~~C--~~CGyvYd~~~Gd-p~~gi~pGt~-f~~lP~dw~CP~Cg~~K~~F~ 49 (52)
T 1yk4_A 3 LSC--KICGYIYDEDEGD-PDNGISPGTK-FEDLPDDWVCPLCGAPKSEFE 49 (52)
T ss_dssp EEE--SSSSCEEETTTCB-GGGTBCTTCC-GGGSCTTCBCTTTCCBGGGEE
T ss_pred EEe--CCCCeEECCCcCC-cccCcCCCCC-HhHCCCCCcCCCCCCCHHHcE
Confidence 357 7899999877533 3355668887 8899999999 776655554
No 40
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=28.65 E-value=44 Score=27.79 Aligned_cols=47 Identities=19% Similarity=0.429 Sum_probs=35.3
Q ss_pred CCCcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchh
Q psy6601 83 LGTKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFS 133 (459)
Q Consensus 83 ~gt~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~ 133 (459)
....| ..||..|+++... ...-.-||.| |-|.--.|.| |+..-.+|.
T Consensus 34 ~~y~C--~vCGyvYD~~~Gd-p~~gI~pGT~-fedlPddW~CPvCga~K~~F~ 82 (87)
T 1s24_A 34 LKWIC--ITCGHIYDEALGD-EAEGFTPGTR-FEDIPDDWCCPDCGATKEDYV 82 (87)
T ss_dssp CEEEE--TTTTEEEETTSCC-TTTTCCSCCC-GGGCCTTCCCSSSCCCGGGEE
T ss_pred ceEEC--CCCCeEecCCcCC-cccCcCCCCC-hhHCCCCCCCCCCCCCHHHhh
Confidence 46889 8899999976533 3356668887 8888999999 776665665
No 41
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=27.94 E-value=46 Score=27.31 Aligned_cols=48 Identities=21% Similarity=0.401 Sum_probs=35.9
Q ss_pred CCCcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchhh
Q psy6601 83 LGTKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFSA 134 (459)
Q Consensus 83 ~gt~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~e 134 (459)
....| ..||..|+++..+ ...-.=||.| |-|.-..|.| |+..-.+|..
T Consensus 26 ~~y~C--~vCGyvYD~~~Gd-p~~gI~pGT~-fedlPddW~CPvCga~K~~F~~ 75 (81)
T 2kn9_A 26 KLFRC--IQCGFEYDEALGW-PEDGIAAGTR-WDDIPDDWSCPDCGAAKSDFEM 75 (81)
T ss_dssp CEEEE--TTTCCEEETTTCB-TTTTBCTTCC-TTTSCTTCCCTTTCCCGGGEEE
T ss_pred ceEEe--CCCCEEEcCCcCC-cccCcCCCCC-hhHCCCCCcCCCCCCCHHHcEE
Confidence 46889 8899999976533 3355668887 8888899999 7766666653
No 42
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=27.73 E-value=43 Score=25.07 Aligned_cols=45 Identities=20% Similarity=0.487 Sum_probs=32.2
Q ss_pred CcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchh
Q psy6601 85 TKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFS 133 (459)
Q Consensus 85 t~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~ 133 (459)
..| ..||..|+++... ...-.-||.| |-|.-..|.| |+..-.+|.
T Consensus 4 y~C--~~CGyvYd~~~Gd-p~~gi~pGt~-f~~lP~dw~CP~Cg~~K~~F~ 50 (52)
T 1e8j_A 4 YVC--TVCGYEYDPAKGD-PDSGIKPGTK-FEDLPDDWACPVCGASKDAFE 50 (52)
T ss_dssp EEC--SSSCCCCCTTTCC-TTTTCCSSCC-TTSSCTTCCCSSSCCCTTSCE
T ss_pred EEe--CCCCeEEcCCcCC-cccCcCCCCc-hHHCCCCCcCCCCCCcHHHcE
Confidence 467 6899999876433 2345568887 8888899999 776655654
No 43
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=27.04 E-value=49 Score=26.22 Aligned_cols=47 Identities=23% Similarity=0.499 Sum_probs=34.7
Q ss_pred CCcccccCcCceeeCCCCccccceecCCCcccccCCccccc--CCCcccchhh
Q psy6601 84 GTKCKNNACKQSYEGPESLSTICVHHAGVPVFHEGLKFWSC--CTKKTTEFSA 134 (459)
Q Consensus 84 gt~CkN~GCgq~F~~~eN~~~~C~yHPG~PvFHDg~K~WSC--CkkkttDF~e 134 (459)
...| ..||..|+++..+ ...-.-||.| |-|.-..|.| |+..-.+|..
T Consensus 7 ~y~C--~vCGyiYd~~~Gd-p~~gi~pGT~-f~~lPddw~CP~Cga~K~~F~~ 55 (70)
T 1dx8_A 7 KYEC--EACGYIYEPEKGD-KFAGIPPGTP-FVDLSDSFMCPACRSPKNQFKS 55 (70)
T ss_dssp CEEE--TTTCCEECTTTCC-TTTTCCSSCC-GGGSCTTCBCTTTCCBGGGEEE
T ss_pred eEEe--CCCCEEEcCCCCC-cccCcCCCCc-hhhCCCCCcCCCCCCCHHHceE
Confidence 4678 7899999877543 3356668888 8888899999 7766555553
Done!